AL543_19000 ff09a46a4049b50aaec266058577ba23 268 Gene3D G3DSA:3.40.720.10 3 262 5.4E-33 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AL543_19000 ff09a46a4049b50aaec266058577ba23 268 SUPERFAMILY SSF53649 2 254 1.18E-46 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AL543_19000 ff09a46a4049b50aaec266058577ba23 268 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 5 117 2.7E-6 T 11-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 AL543_19000 ff09a46a4049b50aaec266058577ba23 268 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 147 209 3.8E-10 T 11-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 AL543_17745 928bfbf44bc57e060aac3c68969bee94 152 Gene3D G3DSA:3.30.70.1290 3 136 7.0E-42 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 AL543_17745 928bfbf44bc57e060aac3c68969bee94 152 SUPERFAMILY SSF143422 1 129 3.01E-47 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 AL543_17745 928bfbf44bc57e060aac3c68969bee94 152 Pfam PF01797 Transposase IS200 like 12 129 3.4E-37 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AL543_17745 928bfbf44bc57e060aac3c68969bee94 152 SMART SM01321 11 129 3.5E-40 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AL543_17940 928bfbf44bc57e060aac3c68969bee94 152 Gene3D G3DSA:3.30.70.1290 3 136 7.0E-42 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 AL543_17940 928bfbf44bc57e060aac3c68969bee94 152 SUPERFAMILY SSF143422 1 129 3.01E-47 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 AL543_17940 928bfbf44bc57e060aac3c68969bee94 152 Pfam PF01797 Transposase IS200 like 12 129 3.4E-37 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AL543_17940 928bfbf44bc57e060aac3c68969bee94 152 SMART SM01321 11 129 3.5E-40 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AL543_05630 928bfbf44bc57e060aac3c68969bee94 152 Gene3D G3DSA:3.30.70.1290 3 136 7.0E-42 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 AL543_05630 928bfbf44bc57e060aac3c68969bee94 152 SUPERFAMILY SSF143422 1 129 3.01E-47 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 AL543_05630 928bfbf44bc57e060aac3c68969bee94 152 Pfam PF01797 Transposase IS200 like 12 129 3.4E-37 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AL543_05630 928bfbf44bc57e060aac3c68969bee94 152 SMART SM01321 11 129 3.5E-40 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AL543_12655 928bfbf44bc57e060aac3c68969bee94 152 Gene3D G3DSA:3.30.70.1290 3 136 7.0E-42 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 AL543_12655 928bfbf44bc57e060aac3c68969bee94 152 SUPERFAMILY SSF143422 1 129 3.01E-47 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 AL543_12655 928bfbf44bc57e060aac3c68969bee94 152 Pfam PF01797 Transposase IS200 like 12 129 3.4E-37 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AL543_12655 928bfbf44bc57e060aac3c68969bee94 152 SMART SM01321 11 129 3.5E-40 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AL543_06445 928bfbf44bc57e060aac3c68969bee94 152 Gene3D G3DSA:3.30.70.1290 3 136 7.0E-42 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 AL543_06445 928bfbf44bc57e060aac3c68969bee94 152 SUPERFAMILY SSF143422 1 129 3.01E-47 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 AL543_06445 928bfbf44bc57e060aac3c68969bee94 152 Pfam PF01797 Transposase IS200 like 12 129 3.4E-37 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AL543_06445 928bfbf44bc57e060aac3c68969bee94 152 SMART SM01321 11 129 3.5E-40 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AL543_15405 928bfbf44bc57e060aac3c68969bee94 152 Gene3D G3DSA:3.30.70.1290 3 136 7.0E-42 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 AL543_15405 928bfbf44bc57e060aac3c68969bee94 152 SUPERFAMILY SSF143422 1 129 3.01E-47 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 AL543_15405 928bfbf44bc57e060aac3c68969bee94 152 Pfam PF01797 Transposase IS200 like 12 129 3.4E-37 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AL543_15405 928bfbf44bc57e060aac3c68969bee94 152 SMART SM01321 11 129 3.5E-40 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AL543_03930 928bfbf44bc57e060aac3c68969bee94 152 Gene3D G3DSA:3.30.70.1290 3 136 7.0E-42 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 AL543_03930 928bfbf44bc57e060aac3c68969bee94 152 SUPERFAMILY SSF143422 1 129 3.01E-47 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 AL543_03930 928bfbf44bc57e060aac3c68969bee94 152 Pfam PF01797 Transposase IS200 like 12 129 3.4E-37 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AL543_03930 928bfbf44bc57e060aac3c68969bee94 152 SMART SM01321 11 129 3.5E-40 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AL543_00860 928bfbf44bc57e060aac3c68969bee94 152 Gene3D G3DSA:3.30.70.1290 3 136 7.0E-42 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 AL543_00860 928bfbf44bc57e060aac3c68969bee94 152 SUPERFAMILY SSF143422 1 129 3.01E-47 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 AL543_00860 928bfbf44bc57e060aac3c68969bee94 152 Pfam PF01797 Transposase IS200 like 12 129 3.4E-37 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AL543_00860 928bfbf44bc57e060aac3c68969bee94 152 SMART SM01321 11 129 3.5E-40 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AL543_11645 928bfbf44bc57e060aac3c68969bee94 152 Gene3D G3DSA:3.30.70.1290 3 136 7.0E-42 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 AL543_11645 928bfbf44bc57e060aac3c68969bee94 152 SUPERFAMILY SSF143422 1 129 3.01E-47 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 AL543_11645 928bfbf44bc57e060aac3c68969bee94 152 Pfam PF01797 Transposase IS200 like 12 129 3.4E-37 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AL543_11645 928bfbf44bc57e060aac3c68969bee94 152 SMART SM01321 11 129 3.5E-40 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AL543_10675 267101faa86a624a916dc7466cbebbb1 126 PRINTS PR01650 Bacterial translocase SecE signature 45 66 1.5E-41 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 AL543_10675 267101faa86a624a916dc7466cbebbb1 126 PRINTS PR01650 Bacterial translocase SecE signature 66 86 1.5E-41 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 AL543_10675 267101faa86a624a916dc7466cbebbb1 126 PRINTS PR01650 Bacterial translocase SecE signature 110 126 1.5E-41 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 AL543_10675 267101faa86a624a916dc7466cbebbb1 126 PRINTS PR01650 Bacterial translocase SecE signature 90 110 1.5E-41 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 AL543_10675 267101faa86a624a916dc7466cbebbb1 126 Hamap MF_00422 Protein translocase subunit SecE [secE]. 68 122 13.357 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AL543_10675 267101faa86a624a916dc7466cbebbb1 126 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 72 124 3.4E-17 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 AL543_10675 267101faa86a624a916dc7466cbebbb1 126 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 72 100 - T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AL543_10675 267101faa86a624a916dc7466cbebbb1 126 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 72 122 5.1E-20 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AL543_10675 267101faa86a624a916dc7466cbebbb1 126 Gene3D G3DSA:1.20.5.1030 67 123 1.1E-16 T 11-10-2018 IPR038379 SecE superfamily AL543_12035 5d438184f40fcf31819d81c831e92bcb 122 Pfam PF02021 Uncharacterised protein family UPF0102 13 105 3.3E-27 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 AL543_12035 5d438184f40fcf31819d81c831e92bcb 122 Gene3D G3DSA:3.40.1350.10 13 122 4.2E-31 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 AL543_12035 5d438184f40fcf31819d81c831e92bcb 122 Hamap MF_00048 UPF0102 protein YraN [yraN]. 6 118 23.217 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 AL543_12035 5d438184f40fcf31819d81c831e92bcb 122 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 6 120 3.8E-33 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 AL543_12035 5d438184f40fcf31819d81c831e92bcb 122 SUPERFAMILY SSF52980 7 110 8.94E-19 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AL543_19805 bb87ab0d828ee3bfd0fe19856078b536 175 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 11-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 AL543_19805 bb87ab0d828ee3bfd0fe19856078b536 175 TIGRFAM TIGR01752 flav_long: flavodoxin 4 168 1.4E-73 T 11-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 AL543_19805 bb87ab0d828ee3bfd0fe19856078b536 175 PIRSF PIRSF038996 1 172 9.1E-69 T 11-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 AL543_19805 bb87ab0d828ee3bfd0fe19856078b536 175 SUPERFAMILY SSF52218 4 171 2.99E-53 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL543_19805 bb87ab0d828ee3bfd0fe19856078b536 175 Gene3D G3DSA:3.40.50.360 3 175 2.4E-57 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL543_19805 bb87ab0d828ee3bfd0fe19856078b536 175 Pfam PF00258 Flavodoxin 6 160 1.1E-32 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AL543_19370 55845e2ae45144e831ce3d45f84a7fad 414 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 370 2.8E-37 T 11-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AL543_19370 55845e2ae45144e831ce3d45f84a7fad 414 Gene3D G3DSA:3.40.47.10 1 255 2.6E-94 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL543_19370 55845e2ae45144e831ce3d45f84a7fad 414 SUPERFAMILY SSF53901 215 413 2.62E-68 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL543_19370 55845e2ae45144e831ce3d45f84a7fad 414 Gene3D G3DSA:3.40.47.10 261 414 4.1E-55 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL543_19370 55845e2ae45144e831ce3d45f84a7fad 414 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 1.1E-65 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AL543_19370 55845e2ae45144e831ce3d45f84a7fad 414 SMART SM00825 Beta-ketoacyl synthase 6 414 3.0E-17 T 11-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AL543_19370 55845e2ae45144e831ce3d45f84a7fad 414 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 11-10-2018 IPR018201 Beta-ketoacyl synthase, active site AL543_19370 55845e2ae45144e831ce3d45f84a7fad 414 PIRSF PIRSF000447 1 414 3.9E-206 T 11-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 AL543_19370 55845e2ae45144e831ce3d45f84a7fad 414 SUPERFAMILY SSF53901 3 252 2.74E-82 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL543_19370 55845e2ae45144e831ce3d45f84a7fad 414 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 412 2.2E-193 T 11-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 AL543_15625 ee4c989e2fb9cb94d0b8f231acc07897 177 SUPERFAMILY SSF52833 43 173 2.3E-28 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL543_15625 ee4c989e2fb9cb94d0b8f231acc07897 177 Gene3D G3DSA:3.40.30.10 25 176 6.6E-33 T 11-10-2018 AL543_15625 ee4c989e2fb9cb94d0b8f231acc07897 177 Pfam PF08534 Redoxin 41 161 1.2E-10 T 11-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AL543_15625 ee4c989e2fb9cb94d0b8f231acc07897 177 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 27 170 5.9E-46 T 11-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 AL543_14135 785c64e450d163a4240db18b9de2c599 195 Gene3D G3DSA:3.30.70.1070 113 187 1.6E-9 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AL543_14135 785c64e450d163a4240db18b9de2c599 195 Pfam PF05036 Sporulation related domain 119 182 3.8E-10 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 AL543_14135 785c64e450d163a4240db18b9de2c599 195 SUPERFAMILY SSF110997 118 191 1.96E-14 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AL543_03855 d2a0b706170a9546dcc9af79147987da 248 Pfam PF05742 Transport and Golgi organisation 2 1 120 3.6E-8 T 11-10-2018 IPR008551 Transport and Golgi organisation protein 2 AL543_18880 5b9e42f9f5595d933a18263608f37010 789 SMART SM00382 347 491 1.1E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_18880 5b9e42f9f5595d933a18263608f37010 789 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 702 721 2.2E-56 T 11-10-2018 AL543_18880 5b9e42f9f5595d933a18263608f37010 789 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 672 691 2.2E-56 T 11-10-2018 AL543_18880 5b9e42f9f5595d933a18263608f37010 789 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 725 743 2.2E-56 T 11-10-2018 AL543_18880 5b9e42f9f5595d933a18263608f37010 789 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 594 610 2.2E-56 T 11-10-2018 AL543_18880 5b9e42f9f5595d933a18263608f37010 789 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 355 374 2.2E-56 T 11-10-2018 AL543_18880 5b9e42f9f5595d933a18263608f37010 789 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 569 771 6.7E-100 T 11-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 AL543_18880 5b9e42f9f5595d933a18263608f37010 789 SUPERFAMILY SSF52540 313 586 1.36E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_18880 5b9e42f9f5595d933a18263608f37010 789 Gene3D G3DSA:1.10.8.60 490 583 1.3E-32 T 11-10-2018 AL543_18880 5b9e42f9f5595d933a18263608f37010 789 SUPERFAMILY SSF88697 10 200 1.12E-48 T 11-10-2018 IPR015947 PUA-like superfamily AL543_18880 5b9e42f9f5595d933a18263608f37010 789 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 351 488 1.1E-17 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL543_18880 5b9e42f9f5595d933a18263608f37010 789 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 196 2.9E-40 T 11-10-2018 IPR003111 Lon, substrate-binding domain AL543_18880 5b9e42f9f5595d933a18263608f37010 789 Gene3D G3DSA:3.30.230.10 584 771 1.3E-86 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL543_18880 5b9e42f9f5595d933a18263608f37010 789 SUPERFAMILY SSF54211 594 769 3.34E-60 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL543_18880 5b9e42f9f5595d933a18263608f37010 789 PIRSF PIRSF001174 1 774 0.0 T 11-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 AL543_18880 5b9e42f9f5595d933a18263608f37010 789 Gene3D G3DSA:1.20.58.1480 119 244 2.4E-44 T 11-10-2018 AL543_18880 5b9e42f9f5595d933a18263608f37010 789 Hamap MF_01973 Lon protease [lon]. 11 771 72.541 T 11-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 AL543_18880 5b9e42f9f5595d933a18263608f37010 789 Gene3D G3DSA:3.40.50.300 312 489 3.5E-61 T 11-10-2018 AL543_18880 5b9e42f9f5595d933a18263608f37010 789 SMART SM00464 10 201 3.0E-76 T 11-10-2018 IPR003111 Lon, substrate-binding domain AL543_18880 5b9e42f9f5595d933a18263608f37010 789 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 675 683 - T 11-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 AL543_18880 5b9e42f9f5595d933a18263608f37010 789 TIGRFAM TIGR00763 lon: endopeptidase La 12 770 0.0 T 11-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 AL543_18880 5b9e42f9f5595d933a18263608f37010 789 Gene3D G3DSA:2.30.130.40 1 116 1.6E-35 T 11-10-2018 AL543_14795 3e009ff7dd0978414d79b4be2c9a6fd6 714 SUPERFAMILY SSF75138 229 353 3.14E-24 T 11-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily AL543_14795 3e009ff7dd0978414d79b4be2c9a6fd6 714 Pfam PF13500 AAA domain 3 229 3.1E-48 T 11-10-2018 AL543_14795 3e009ff7dd0978414d79b4be2c9a6fd6 714 SUPERFAMILY SSF53659 392 709 3.37E-96 T 11-10-2018 AL543_14795 3e009ff7dd0978414d79b4be2c9a6fd6 714 SUPERFAMILY SSF52540 1 240 5.84E-29 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_14795 3e009ff7dd0978414d79b4be2c9a6fd6 714 PIRSF PIRSF006107 1 714 0.0 T 11-10-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AL543_14795 3e009ff7dd0978414d79b4be2c9a6fd6 714 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 406 706 1.4E-137 T 11-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AL543_14795 3e009ff7dd0978414d79b4be2c9a6fd6 714 Gene3D G3DSA:3.40.1390.20 225 365 4.3E-14 T 11-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily AL543_14795 3e009ff7dd0978414d79b4be2c9a6fd6 714 Pfam PF07085 DRTGG domain 233 344 2.2E-28 T 11-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AL543_14795 3e009ff7dd0978414d79b4be2c9a6fd6 714 Pfam PF01515 Phosphate acetyl/butaryl transferase 391 706 6.6E-130 T 11-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AL543_14795 3e009ff7dd0978414d79b4be2c9a6fd6 714 Gene3D G3DSA:3.40.50.10750 529 682 1.9E-137 T 11-10-2018 AL543_14795 3e009ff7dd0978414d79b4be2c9a6fd6 714 Gene3D G3DSA:3.40.50.10950 398 709 1.9E-137 T 11-10-2018 AL543_14795 3e009ff7dd0978414d79b4be2c9a6fd6 714 Gene3D G3DSA:3.40.50.300 5 212 2.7E-12 T 11-10-2018 AL543_01375 0a992a6bb5bcb75196882b8fa8d83b76 729 SUPERFAMILY SSF81296 22 107 4.2E-11 T 11-10-2018 IPR014756 Immunoglobulin E-set AL543_01375 0a992a6bb5bcb75196882b8fa8d83b76 729 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 629 725 3.9E-17 T 11-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 AL543_01375 0a992a6bb5bcb75196882b8fa8d83b76 729 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 132 208 7.7E-19 T 11-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 AL543_01375 0a992a6bb5bcb75196882b8fa8d83b76 729 Gene3D G3DSA:3.20.20.80 225 623 5.1E-162 T 11-10-2018 AL543_01375 0a992a6bb5bcb75196882b8fa8d83b76 729 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 116 723 4.9E-244 T 11-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 AL543_01375 0a992a6bb5bcb75196882b8fa8d83b76 729 SMART SM00642 251 595 5.6E-7 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL543_01375 0a992a6bb5bcb75196882b8fa8d83b76 729 Pfam PF00128 Alpha amylase, catalytic domain 276 348 9.9E-7 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL543_01375 0a992a6bb5bcb75196882b8fa8d83b76 729 SUPERFAMILY SSF51445 179 617 3.13E-109 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AL543_01375 0a992a6bb5bcb75196882b8fa8d83b76 729 Gene3D G3DSA:2.60.40.1180 624 727 2.5E-30 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta AL543_01375 0a992a6bb5bcb75196882b8fa8d83b76 729 Gene3D G3DSA:2.60.40.10 8 221 5.5E-51 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL543_01375 0a992a6bb5bcb75196882b8fa8d83b76 729 SUPERFAMILY SSF51011 624 726 6.47E-28 T 11-10-2018 AL543_01375 0a992a6bb5bcb75196882b8fa8d83b76 729 PIRSF PIRSF000463 10 729 1.7E-279 T 11-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 AL543_01375 0a992a6bb5bcb75196882b8fa8d83b76 729 SUPERFAMILY SSF81296 117 227 2.97E-24 T 11-10-2018 IPR014756 Immunoglobulin E-set AL543_01375 0a992a6bb5bcb75196882b8fa8d83b76 729 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 92 727 41.009 T 11-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 AL543_06505 6acaddf62ec13829635d66c73a0522bc 561 Gene3D G3DSA:3.40.50.12780 15 436 5.9E-84 T 11-10-2018 AL543_06505 6acaddf62ec13829635d66c73a0522bc 561 Pfam PF00501 AMP-binding enzyme 23 440 1.6E-87 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AL543_06505 6acaddf62ec13829635d66c73a0522bc 561 SUPERFAMILY SSF56801 15 547 4.06E-109 T 11-10-2018 AL543_06505 6acaddf62ec13829635d66c73a0522bc 561 ProSitePatterns PS00455 Putative AMP-binding domain signature. 182 193 - T 11-10-2018 IPR020845 AMP-binding, conserved site AL543_01210 1735b0cd077bcc3380b16ba499e6d153 180 Gene3D G3DSA:2.30.30.40 37 163 1.4E-31 T 11-10-2018 AL543_01210 1735b0cd077bcc3380b16ba499e6d153 180 SMART SM00260 30 169 2.9E-29 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AL543_01210 1735b0cd077bcc3380b16ba499e6d153 180 SUPERFAMILY SSF50341 33 172 3.01E-31 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AL543_01210 1735b0cd077bcc3380b16ba499e6d153 180 Gene3D G3DSA:2.40.50.180 53 164 1.4E-31 T 11-10-2018 AL543_01210 1735b0cd077bcc3380b16ba499e6d153 180 Pfam PF01584 CheW-like domain 35 171 2.9E-31 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AL543_08560 54cc25684552f0be09d2cf0c5f34625d 609 SUPERFAMILY SSF52540 5 211 1.44E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_08560 54cc25684552f0be09d2cf0c5f34625d 609 SUPERFAMILY SSF54980 306 391 3.31E-16 T 11-10-2018 IPR035647 EF-G domain III/V-like AL543_08560 54cc25684552f0be09d2cf0c5f34625d 609 PRINTS PR00315 GTP-binding elongation factor signature 75 85 1.8E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL543_08560 54cc25684552f0be09d2cf0c5f34625d 609 PRINTS PR00315 GTP-binding elongation factor signature 91 102 1.8E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL543_08560 54cc25684552f0be09d2cf0c5f34625d 609 PRINTS PR00315 GTP-binding elongation factor signature 11 24 1.8E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL543_08560 54cc25684552f0be09d2cf0c5f34625d 609 PRINTS PR00315 GTP-binding elongation factor signature 55 63 1.8E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL543_08560 54cc25684552f0be09d2cf0c5f34625d 609 PRINTS PR00315 GTP-binding elongation factor signature 127 136 1.8E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL543_08560 54cc25684552f0be09d2cf0c5f34625d 609 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 9 603 2.8E-296 T 11-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 AL543_08560 54cc25684552f0be09d2cf0c5f34625d 609 SUPERFAMILY SSF50447 155 303 7.95E-33 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AL543_08560 54cc25684552f0be09d2cf0c5f34625d 609 Gene3D G3DSA:3.30.70.870 310 594 4.5E-130 T 11-10-2018 AL543_08560 54cc25684552f0be09d2cf0c5f34625d 609 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site AL543_08560 54cc25684552f0be09d2cf0c5f34625d 609 Pfam PF00009 Elongation factor Tu GTP binding domain 8 198 3.2E-57 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL543_08560 54cc25684552f0be09d2cf0c5f34625d 609 Gene3D G3DSA:3.30.70.240 393 486 4.5E-130 T 11-10-2018 AL543_08560 54cc25684552f0be09d2cf0c5f34625d 609 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 155 5.9E-24 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL543_08560 54cc25684552f0be09d2cf0c5f34625d 609 Pfam PF00679 Elongation factor G C-terminus 399 481 3.5E-22 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like AL543_08560 54cc25684552f0be09d2cf0c5f34625d 609 Gene3D G3DSA:2.40.50.250 487 603 4.5E-130 T 11-10-2018 AL543_08560 54cc25684552f0be09d2cf0c5f34625d 609 Pfam PF03144 Elongation factor Tu domain 2 223 293 2.4E-9 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AL543_08560 54cc25684552f0be09d2cf0c5f34625d 609 SUPERFAMILY SSF54980 402 516 2.78E-27 T 11-10-2018 IPR035647 EF-G domain III/V-like AL543_08560 54cc25684552f0be09d2cf0c5f34625d 609 Gene3D G3DSA:2.40.30.10 203 303 1.8E-33 T 11-10-2018 AL543_08560 54cc25684552f0be09d2cf0c5f34625d 609 Gene3D G3DSA:3.40.50.300 5 202 3.0E-68 T 11-10-2018 AL543_02880 6c2065f16465f1435c1d21c2ba141d44 455 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 24 41 - T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL543_02880 6c2065f16465f1435c1d21c2ba141d44 455 Gene3D G3DSA:3.30.1360.60 4 82 2.0E-20 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AL543_02880 6c2065f16465f1435c1d21c2ba141d44 455 Pfam PF02378 Phosphotransferase system, EIIC 116 390 1.3E-26 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL543_02880 6c2065f16465f1435c1d21c2ba141d44 455 SUPERFAMILY SSF55604 12 81 1.7E-16 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AL543_02880 6c2065f16465f1435c1d21c2ba141d44 455 Pfam PF00367 phosphotransferase system, EIIB 14 46 2.2E-11 T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL543_14610 a320ed4a012d481288576eda803c7b83 256 SMART SM00420 6 58 1.9E-16 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL543_14610 a320ed4a012d481288576eda803c7b83 256 SUPERFAMILY SSF46785 4 62 2.03E-13 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_14610 a320ed4a012d481288576eda803c7b83 256 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 5.2E-5 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL543_14610 a320ed4a012d481288576eda803c7b83 256 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 5.2E-5 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL543_14610 a320ed4a012d481288576eda803c7b83 256 SUPERFAMILY SSF100950 74 234 1.67E-29 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AL543_14610 a320ed4a012d481288576eda803c7b83 256 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 11-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AL543_14610 a320ed4a012d481288576eda803c7b83 256 Pfam PF00455 DeoR C terminal sensor domain 75 233 3.4E-50 T 11-10-2018 IPR014036 DeoR C-terminal sensor domain AL543_14610 a320ed4a012d481288576eda803c7b83 256 Gene3D G3DSA:1.10.10.10 1 53 1.9E-7 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_14610 a320ed4a012d481288576eda803c7b83 256 Gene3D G3DSA:3.30.750.70 70 139 4.5E-6 T 11-10-2018 AL543_14610 a320ed4a012d481288576eda803c7b83 256 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 1.4E-17 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL543_14610 a320ed4a012d481288576eda803c7b83 256 SMART SM01134 73 234 7.3E-66 T 11-10-2018 AL543_11015 3bdf9e0ad6be9e21492c23dcb3c13ab7 577 SUPERFAMILY SSF56014 154 349 1.83E-57 T 11-10-2018 AL543_11015 3bdf9e0ad6be9e21492c23dcb3c13ab7 577 SUPERFAMILY SSF55124 351 428 4.91E-21 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL543_11015 3bdf9e0ad6be9e21492c23dcb3c13ab7 577 PRINTS PR00397 Sirohaem Fe-binding site signature 484 502 2.4E-8 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL543_11015 3bdf9e0ad6be9e21492c23dcb3c13ab7 577 PRINTS PR00397 Sirohaem Fe-binding site signature 435 453 2.4E-8 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL543_11015 3bdf9e0ad6be9e21492c23dcb3c13ab7 577 SUPERFAMILY SSF55124 19 150 2.62E-27 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL543_11015 3bdf9e0ad6be9e21492c23dcb3c13ab7 577 Gene3D G3DSA:3.30.413.10 432 574 1.1E-33 T 11-10-2018 AL543_11015 3bdf9e0ad6be9e21492c23dcb3c13ab7 577 SUPERFAMILY SSF56014 434 566 3.01E-32 T 11-10-2018 AL543_11015 3bdf9e0ad6be9e21492c23dcb3c13ab7 577 Gene3D G3DSA:3.90.480.20 22 412 1.9E-82 T 11-10-2018 AL543_11015 3bdf9e0ad6be9e21492c23dcb3c13ab7 577 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 484 500 - T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL543_11015 3bdf9e0ad6be9e21492c23dcb3c13ab7 577 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 358 421 1.4E-13 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL543_11015 3bdf9e0ad6be9e21492c23dcb3c13ab7 577 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 84 143 5.2E-13 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL543_11015 3bdf9e0ad6be9e21492c23dcb3c13ab7 577 Gene3D G3DSA:3.30.413.10 146 353 1.9E-82 T 11-10-2018 AL543_11015 3bdf9e0ad6be9e21492c23dcb3c13ab7 577 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 15 577 58.187 T 11-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL543_11015 3bdf9e0ad6be9e21492c23dcb3c13ab7 577 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 433 546 1.6E-4 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL543_11015 3bdf9e0ad6be9e21492c23dcb3c13ab7 577 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 24 565 3.6E-280 T 11-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL543_11015 3bdf9e0ad6be9e21492c23dcb3c13ab7 577 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 178 334 6.3E-44 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL543_10640 eb38fbba56b0feecc1835c05778e15b6 320 SUPERFAMILY SSF46785 4 60 3.99E-11 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_10640 eb38fbba56b0feecc1835c05778e15b6 320 SUPERFAMILY SSF55681 68 268 2.32E-61 T 11-10-2018 AL543_10640 eb38fbba56b0feecc1835c05778e15b6 320 Pfam PF02237 Biotin protein ligase C terminal domain 271 317 4.9E-12 T 11-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AL543_10640 eb38fbba56b0feecc1835c05778e15b6 320 TIGRFAM TIGR00122 birA_repr_reg: biotin operon repressor 8 75 1.6E-20 T 11-10-2018 IPR004409 Biotin operon repressor, helix-turn-helix domain GO:0006355 KEGG: 00780+6.3.4.15 AL543_10640 eb38fbba56b0feecc1835c05778e15b6 320 Pfam PF08279 HTH domain 8 59 3.7E-10 T 11-10-2018 IPR013196 Helix-turn-helix, type 11 AL543_10640 eb38fbba56b0feecc1835c05778e15b6 320 Gene3D G3DSA:1.10.10.10 1 64 4.6E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_10640 eb38fbba56b0feecc1835c05778e15b6 320 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 80 317 2.7E-68 T 11-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AL543_10640 eb38fbba56b0feecc1835c05778e15b6 320 Gene3D G3DSA:2.30.30.100 271 313 6.5E-20 T 11-10-2018 AL543_10640 eb38fbba56b0feecc1835c05778e15b6 320 SUPERFAMILY SSF50037 271 317 3.34E-10 T 11-10-2018 IPR008988 Transcriptional repressor, C-terminal AL543_10640 eb38fbba56b0feecc1835c05778e15b6 320 Pfam PF03099 Biotin/lipoate A/B protein ligase family 85 207 4.0E-20 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 AL543_10640 eb38fbba56b0feecc1835c05778e15b6 320 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 7 317 33.852 T 11-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 AL543_10640 eb38fbba56b0feecc1835c05778e15b6 320 Gene3D G3DSA:3.30.930.10 65 270 3.3E-67 T 11-10-2018 AL543_16720 eee4aaf745ec293bcc0f6f760563e3c7 707 SUPERFAMILY SSF53335 139 371 4.84E-39 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL543_16720 eee4aaf745ec293bcc0f6f760563e3c7 707 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 706 31.482 T 11-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 AL543_16720 eee4aaf745ec293bcc0f6f760563e3c7 707 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 434 662 5.2E-27 T 11-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 AL543_16720 eee4aaf745ec293bcc0f6f760563e3c7 707 Gene3D G3DSA:3.40.50.150 488 706 1.1E-75 T 11-10-2018 AL543_16720 eee4aaf745ec293bcc0f6f760563e3c7 707 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 11-10-2018 IPR000241 Putative RNA methylase domain AL543_16720 eee4aaf745ec293bcc0f6f760563e3c7 707 PIRSF PIRSF037618 1 707 2.8E-299 T 11-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 AL543_16720 eee4aaf745ec293bcc0f6f760563e3c7 707 Pfam PF02926 THUMP domain 31 153 2.4E-7 T 11-10-2018 IPR004114 THUMP domain GO:0003723 AL543_16720 eee4aaf745ec293bcc0f6f760563e3c7 707 Gene3D G3DSA:3.40.50.150 169 371 2.2E-134 T 11-10-2018 AL543_16720 eee4aaf745ec293bcc0f6f760563e3c7 707 SUPERFAMILY SSF53335 399 705 7.44E-70 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL543_16720 eee4aaf745ec293bcc0f6f760563e3c7 707 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 305 311 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AL543_16720 eee4aaf745ec293bcc0f6f760563e3c7 707 SMART SM00981 56 154 4.3E-14 T 11-10-2018 IPR004114 THUMP domain GO:0003723 AL543_16720 eee4aaf745ec293bcc0f6f760563e3c7 707 Pfam PF01170 Putative RNA methylase family UPF0020 162 374 7.6E-61 T 11-10-2018 IPR000241 Putative RNA methylase domain AL543_16720 eee4aaf745ec293bcc0f6f760563e3c7 707 Gene3D G3DSA:3.30.750.80 396 487 2.0E-36 T 11-10-2018 AL543_16720 eee4aaf745ec293bcc0f6f760563e3c7 707 Gene3D G3DSA:3.30.2130.30 6 255 2.2E-134 T 11-10-2018 AL543_10820 1f464ea0731f894a1f3a132308af7384 154 Gene3D G3DSA:3.40.50.300 2 152 1.2E-47 T 11-10-2018 AL543_10820 1f464ea0731f894a1f3a132308af7384 154 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 133 4.8E-42 T 11-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 AL543_10820 1f464ea0731f894a1f3a132308af7384 154 SUPERFAMILY SSF52540 29 148 1.33E-24 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_10820 1f464ea0731f894a1f3a132308af7384 154 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 139 2.7E-51 T 11-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 AL543_17760 adc6089937bf02c6005eee785cf17ced 394 SUPERFAMILY SSF48695 12 187 4.86E-60 T 11-10-2018 IPR036280 Multiheme cytochrome superfamily AL543_17760 adc6089937bf02c6005eee785cf17ced 394 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 16 187 1.3E-73 T 11-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal AL543_17760 adc6089937bf02c6005eee785cf17ced 394 Gene3D G3DSA:1.10.3820.10 14 194 9.3E-39 T 11-10-2018 IPR038266 NapC/NirT cytochrome c superfamily AL543_17760 adc6089937bf02c6005eee785cf17ced 394 PIRSF PIRSF000014 1 394 5.3E-172 T 11-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 AL543_17760 adc6089937bf02c6005eee785cf17ced 394 TIGRFAM TIGR02162 torC: trimethylamine-N-oxide reductase c-type cytochrome TorC 7 394 8.2E-204 T 11-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 AL543_17965 a2e1a8875124246ffff7297a3cf19531 243 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 34 214 1.4E-83 T 11-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 AL543_17965 a2e1a8875124246ffff7297a3cf19531 243 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 38 205 4.5E-67 T 11-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 AL543_17965 a2e1a8875124246ffff7297a3cf19531 243 SUPERFAMILY SSF55729 5 232 4.08E-86 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL543_17965 a2e1a8875124246ffff7297a3cf19531 243 Gene3D G3DSA:2.30.210.20 4 63 2.0E-24 T 11-10-2018 AL543_17965 a2e1a8875124246ffff7297a3cf19531 243 Gene3D G3DSA:3.40.630.70 64 241 1.2E-61 T 11-10-2018 AL543_17965 a2e1a8875124246ffff7297a3cf19531 243 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 243 87.863 T 11-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 AL543_15185 f513a06f45ef22439bb2b651d78e8849 523 PRINTS PR00095 Anthranilate synthase component I signature 369 382 2.5E-23 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL543_15185 f513a06f45ef22439bb2b651d78e8849 523 PRINTS PR00095 Anthranilate synthase component I signature 355 368 2.5E-23 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL543_15185 f513a06f45ef22439bb2b651d78e8849 523 PRINTS PR00095 Anthranilate synthase component I signature 449 463 2.5E-23 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL543_15185 f513a06f45ef22439bb2b651d78e8849 523 PRINTS PR00095 Anthranilate synthase component I signature 464 478 2.5E-23 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL543_15185 f513a06f45ef22439bb2b651d78e8849 523 Pfam PF00425 chorismate binding enzyme 247 507 3.6E-85 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AL543_15185 f513a06f45ef22439bb2b651d78e8849 523 Pfam PF04715 Anthranilate synthase component I, N terminal region 24 198 6.6E-16 T 11-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL543_15185 f513a06f45ef22439bb2b651d78e8849 523 SUPERFAMILY SSF56322 14 515 7.85E-163 T 11-10-2018 IPR005801 ADC synthase GO:0009058 AL543_15185 f513a06f45ef22439bb2b651d78e8849 523 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 22 519 7.7E-228 T 11-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL543_15185 f513a06f45ef22439bb2b651d78e8849 523 PIRSF PIRSF001373 3 523 1.1E-255 T 11-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL543_15185 f513a06f45ef22439bb2b651d78e8849 523 Gene3D G3DSA:3.60.120.10 7 523 1.2E-186 T 11-10-2018 IPR005801 ADC synthase GO:0009058 AL543_19185 86e4931853be4d20118545d17bbf1db1 381 SUPERFAMILY SSF47819 304 379 7.85E-21 T 11-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 AL543_19185 86e4931853be4d20118545d17bbf1db1 381 Hamap MF_01899 Ribonuclease D [rnd]. 11 380 43.523 T 11-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 AL543_19185 86e4931853be4d20118545d17bbf1db1 381 TIGRFAM TIGR01388 rnd: ribonuclease D 13 380 2.3E-161 T 11-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 AL543_19185 86e4931853be4d20118545d17bbf1db1 381 Gene3D G3DSA:1.10.150.80 302 381 4.7E-26 T 11-10-2018 AL543_19185 86e4931853be4d20118545d17bbf1db1 381 Gene3D G3DSA:1.10.150.80 203 300 6.8E-17 T 11-10-2018 AL543_19185 86e4931853be4d20118545d17bbf1db1 381 SUPERFAMILY SSF53098 8 217 3.54E-65 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_19185 86e4931853be4d20118545d17bbf1db1 381 Pfam PF01612 3'-5' exonuclease 11 178 5.5E-35 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AL543_19185 86e4931853be4d20118545d17bbf1db1 381 Pfam PF00570 HRDC domain 221 287 1.6E-7 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AL543_19185 86e4931853be4d20118545d17bbf1db1 381 SMART SM00474 11 179 3.3E-38 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AL543_19185 86e4931853be4d20118545d17bbf1db1 381 Gene3D G3DSA:3.30.420.10 9 202 2.9E-63 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AL543_19185 86e4931853be4d20118545d17bbf1db1 381 SUPERFAMILY SSF47819 203 300 2.38E-21 T 11-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 AL543_08685 98e874285dfb836f7398c5df102f0685 539 Gene3D G3DSA:3.30.70.80 45 129 8.1E-18 T 11-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 AL543_08685 98e874285dfb836f7398c5df102f0685 539 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 461 525 4.0E-10 T 11-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial AL543_08685 98e874285dfb836f7398c5df102f0685 539 PRINTS PR00723 Subtilisin serine protease family (S8) signature 207 220 2.1E-19 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related AL543_08685 98e874285dfb836f7398c5df102f0685 539 PRINTS PR00723 Subtilisin serine protease family (S8) signature 362 378 2.1E-19 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related AL543_08685 98e874285dfb836f7398c5df102f0685 539 PRINTS PR00723 Subtilisin serine protease family (S8) signature 169 188 2.1E-19 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related AL543_08685 98e874285dfb836f7398c5df102f0685 539 SUPERFAMILY SSF54897 50 130 1.53E-13 T 11-10-2018 AL543_08685 98e874285dfb836f7398c5df102f0685 539 Gene3D G3DSA:3.40.50.200 142 428 1.0E-98 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AL543_08685 98e874285dfb836f7398c5df102f0685 539 SUPERFAMILY SSF52743 144 401 2.23E-84 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AL543_08685 98e874285dfb836f7398c5df102f0685 539 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 174 185 - T 11-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site AL543_08685 98e874285dfb836f7398c5df102f0685 539 Gene3D G3DSA:2.60.120.380 440 539 2.2E-27 T 11-10-2018 AL543_08685 98e874285dfb836f7398c5df102f0685 539 Pfam PF00082 Subtilase family 169 398 1.1E-35 T 11-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AL543_08685 98e874285dfb836f7398c5df102f0685 539 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 363 373 - T 11-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site AL543_08685 98e874285dfb836f7398c5df102f0685 539 Pfam PF05922 Peptidase inhibitor I9 52 129 4.6E-12 T 11-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 AL543_08685 98e874285dfb836f7398c5df102f0685 539 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 211 221 - T 11-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site AL543_10725 476f98a20753d60ae505b06c7b613b75 360 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 146 162 - T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AL543_10725 476f98a20753d60ae505b06c7b613b75 360 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 13 352 4.8E-142 T 11-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AL543_10725 476f98a20753d60ae505b06c7b613b75 360 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 10 354 50.908 T 11-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AL543_10725 476f98a20753d60ae505b06c7b613b75 360 SUPERFAMILY SSF51726 5 358 1.67E-121 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 AL543_10725 476f98a20753d60ae505b06c7b613b75 360 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 9 352 3.2E-141 T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AL543_10725 476f98a20753d60ae505b06c7b613b75 360 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 26 35 - T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AL543_10725 476f98a20753d60ae505b06c7b613b75 360 Gene3D G3DSA:3.20.20.210 5 359 3.8E-159 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 AL543_02015 d94fb7e86a7386436b94e07ce1f98eec 412 Pfam PF13582 Metallo-peptidase family M12B Reprolysin-like 46 192 5.0E-29 T 11-10-2018 AL543_02015 d94fb7e86a7386436b94e07ce1f98eec 412 Gene3D G3DSA:2.60.120.260 311 411 3.7E-8 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily AL543_02015 d94fb7e86a7386436b94e07ce1f98eec 412 Gene3D G3DSA:3.40.390.10 25 263 3.4E-8 T 11-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 AL543_02015 d94fb7e86a7386436b94e07ce1f98eec 412 SUPERFAMILY SSF55486 23 248 1.8E-18 T 11-10-2018 AL543_02015 d94fb7e86a7386436b94e07ce1f98eec 412 Pfam PF01483 Proprotein convertase P-domain 330 411 4.3E-17 T 11-10-2018 IPR002884 P domain GO:0004252|GO:0006508 AL543_02015 d94fb7e86a7386436b94e07ce1f98eec 412 SUPERFAMILY SSF49785 308 411 3.53E-13 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily AL543_01585 9c0dfed1ecd34ac3786753582171b6bb 547 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 349 512 3.2E-41 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_01585 9c0dfed1ecd34ac3786753582171b6bb 547 SMART SM00304 218 270 7.2E-12 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_01585 9c0dfed1ecd34ac3786753582171b6bb 547 SMART SM00283 285 546 1.3E-63 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_01585 9c0dfed1ecd34ac3786753582171b6bb 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 383 410 7.2E-22 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL543_01585 9c0dfed1ecd34ac3786753582171b6bb 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 6 31 7.2E-22 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL543_01585 9c0dfed1ecd34ac3786753582171b6bb 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 412 441 7.2E-22 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL543_01585 9c0dfed1ecd34ac3786753582171b6bb 547 Pfam PF00672 HAMP domain 220 266 9.4E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_01585 9c0dfed1ecd34ac3786753582171b6bb 547 Gene3D G3DSA:1.10.287.950 218 547 2.1E-70 T 11-10-2018 AL543_01585 9c0dfed1ecd34ac3786753582171b6bb 547 SUPERFAMILY SSF58104 239 547 7.59E-70 T 11-10-2018 AL543_16690 80018732de2dea21045b819eb9a4f2df 549 Gene3D G3DSA:3.40.50.300 57 190 5.7E-9 T 11-10-2018 AL543_16690 80018732de2dea21045b819eb9a4f2df 549 Gene3D G3DSA:3.30.230.10 291 533 2.0E-92 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL543_16690 80018732de2dea21045b819eb9a4f2df 549 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 314 330 4.3E-12 T 11-10-2018 AL543_16690 80018732de2dea21045b819eb9a4f2df 549 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 397 416 4.3E-12 T 11-10-2018 AL543_16690 80018732de2dea21045b819eb9a4f2df 549 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 427 446 4.3E-12 T 11-10-2018 AL543_16690 80018732de2dea21045b819eb9a4f2df 549 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 457 475 4.3E-12 T 11-10-2018 AL543_16690 80018732de2dea21045b819eb9a4f2df 549 SUPERFAMILY SSF54211 314 506 8.72E-35 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL543_16690 80018732de2dea21045b819eb9a4f2df 549 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 400 503 2.8E-10 T 11-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 AL543_16690 80018732de2dea21045b819eb9a4f2df 549 Pfam PF13654 AAA domain 77 287 1.3E-19 T 11-10-2018 AL543_11560 a307483d048033b94447e81a82413c5b 265 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 215 231 1.7E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_11560 a307483d048033b94447e81a82413c5b 265 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 231 243 1.7E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_11560 a307483d048033b94447e81a82413c5b 265 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 201 215 1.7E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_11560 a307483d048033b94447e81a82413c5b 265 SUPERFAMILY SSF46894 187 258 9.52E-18 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL543_11560 a307483d048033b94447e81a82413c5b 265 Gene3D G3DSA:1.10.10.10 144 263 4.9E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_11560 a307483d048033b94447e81a82413c5b 265 Pfam PF00196 Bacterial regulatory proteins, luxR family 200 254 6.0E-15 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_11560 a307483d048033b94447e81a82413c5b 265 SMART SM00421 198 255 6.9E-18 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_14165 14451ed616d17c5bc211ab1e2701e7a3 146 ProDom PD087558 YRN2_VIBPA ORF2 VV1184 VV13101 MOTY 3'REGION VC1009 VP2110 4 145 5.0E-78 T 11-10-2018 IPR020206 Uncharacterised protein family, VP2110 AL543_14165 14451ed616d17c5bc211ab1e2701e7a3 146 Pfam PF10952 Protein of unknown function (DUF2753) 7 146 7.9E-79 T 11-10-2018 IPR020206 Uncharacterised protein family, VP2110 AL543_05915 fdd65ab245d5d44857c2c6e4fdd7ca4b 192 Pfam PF12464 Maltose acetyltransferase 8 57 4.5E-7 T 11-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AL543_05915 fdd65ab245d5d44857c2c6e4fdd7ca4b 192 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 138 166 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AL543_05915 fdd65ab245d5d44857c2c6e4fdd7ca4b 192 SMART SM01266 6 58 2.1E-10 T 11-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AL543_05915 fdd65ab245d5d44857c2c6e4fdd7ca4b 192 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 130 164 3.7E-7 T 11-10-2018 IPR001451 Hexapeptide repeat AL543_05915 fdd65ab245d5d44857c2c6e4fdd7ca4b 192 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 74 103 0.18 T 11-10-2018 IPR001451 Hexapeptide repeat AL543_05915 fdd65ab245d5d44857c2c6e4fdd7ca4b 192 SUPERFAMILY SSF51161 5 186 1.25E-44 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AL543_05915 fdd65ab245d5d44857c2c6e4fdd7ca4b 192 Gene3D G3DSA:2.160.10.10 1 189 5.0E-65 T 11-10-2018 AL543_10370 435c35d5489bfa8308e126b1c2afdea4 190 Pfam PF03167 Uracil DNA glycosylase superfamily 31 177 3.8E-25 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL543_10370 435c35d5489bfa8308e126b1c2afdea4 190 SMART SM00986 26 182 5.1E-30 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL543_10370 435c35d5489bfa8308e126b1c2afdea4 190 SMART SM00987 26 182 5.1E-30 T 11-10-2018 AL543_10370 435c35d5489bfa8308e126b1c2afdea4 190 Gene3D G3DSA:3.40.470.10 1 190 1.2E-71 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL543_10370 435c35d5489bfa8308e126b1c2afdea4 190 SUPERFAMILY SSF52141 2 189 6.87E-57 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL543_12540 f21712ec6e395d81e4c948970935d60a 949 Gene3D G3DSA:1.10.730.20 646 941 9.7E-84 T 11-10-2018 AL543_12540 f21712ec6e395d81e4c948970935d60a 949 Gene3D G3DSA:3.90.740.10 195 413 1.5E-241 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AL543_12540 f21712ec6e395d81e4c948970935d60a 949 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 853 6.5E-293 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AL543_12540 f21712ec6e395d81e4c948970935d60a 949 Pfam PF06827 Zinc finger found in FPG and IleRS 910 937 1.2E-7 T 11-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 AL543_12540 f21712ec6e395d81e4c948970935d60a 949 Pfam PF08264 Anticodon-binding domain of tRNA 691 853 2.6E-25 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 AL543_12540 f21712ec6e395d81e4c948970935d60a 949 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL543_12540 f21712ec6e395d81e4c948970935d60a 949 SUPERFAMILY SSF47323 658 940 1.64E-72 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL543_12540 f21712ec6e395d81e4c948970935d60a 949 Gene3D G3DSA:3.40.50.620 25 635 1.5E-241 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL543_12540 f21712ec6e395d81e4c948970935d60a 949 SUPERFAMILY SSF50677 205 408 1.05E-53 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AL543_12540 f21712ec6e395d81e4c948970935d60a 949 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 532 545 4.5E-32 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AL543_12540 f21712ec6e395d81e4c948970935d60a 949 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 241 264 4.5E-32 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AL543_12540 f21712ec6e395d81e4c948970935d60a 949 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 406 421 4.5E-32 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AL543_12540 f21712ec6e395d81e4c948970935d60a 949 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 4.5E-32 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AL543_12540 f21712ec6e395d81e4c948970935d60a 949 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 567 576 4.5E-32 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AL543_12540 f21712ec6e395d81e4c948970935d60a 949 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 940 21.482 T 11-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 AL543_12540 f21712ec6e395d81e4c948970935d60a 949 SUPERFAMILY SSF52374 4 653 6.44E-137 T 11-10-2018 AL543_12540 f21712ec6e395d81e4c948970935d60a 949 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 646 5.8E-217 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL543_13725 042427d03cd1c6467159bf71c65da7ab 402 Pfam PF01609 Transposase DDE domain 90 322 8.1E-24 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AL543_13725 042427d03cd1c6467159bf71c65da7ab 402 SUPERFAMILY SSF53098 1 381 9.1E-68 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_06030 042427d03cd1c6467159bf71c65da7ab 402 Pfam PF01609 Transposase DDE domain 90 322 8.1E-24 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AL543_06030 042427d03cd1c6467159bf71c65da7ab 402 SUPERFAMILY SSF53098 1 381 9.1E-68 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_02950 042427d03cd1c6467159bf71c65da7ab 402 Pfam PF01609 Transposase DDE domain 90 322 8.1E-24 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AL543_02950 042427d03cd1c6467159bf71c65da7ab 402 SUPERFAMILY SSF53098 1 381 9.1E-68 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_00665 042427d03cd1c6467159bf71c65da7ab 402 Pfam PF01609 Transposase DDE domain 90 322 8.1E-24 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AL543_00665 042427d03cd1c6467159bf71c65da7ab 402 SUPERFAMILY SSF53098 1 381 9.1E-68 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_04990 042427d03cd1c6467159bf71c65da7ab 402 Pfam PF01609 Transposase DDE domain 90 322 8.1E-24 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AL543_04990 042427d03cd1c6467159bf71c65da7ab 402 SUPERFAMILY SSF53098 1 381 9.1E-68 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_04670 042427d03cd1c6467159bf71c65da7ab 402 Pfam PF01609 Transposase DDE domain 90 322 8.1E-24 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AL543_04670 042427d03cd1c6467159bf71c65da7ab 402 SUPERFAMILY SSF53098 1 381 9.1E-68 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_11305 042427d03cd1c6467159bf71c65da7ab 402 Pfam PF01609 Transposase DDE domain 90 322 8.1E-24 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AL543_11305 042427d03cd1c6467159bf71c65da7ab 402 SUPERFAMILY SSF53098 1 381 9.1E-68 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_04970 042427d03cd1c6467159bf71c65da7ab 402 Pfam PF01609 Transposase DDE domain 90 322 8.1E-24 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AL543_04970 042427d03cd1c6467159bf71c65da7ab 402 SUPERFAMILY SSF53098 1 381 9.1E-68 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_10220 042427d03cd1c6467159bf71c65da7ab 402 Pfam PF01609 Transposase DDE domain 90 322 8.1E-24 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AL543_10220 042427d03cd1c6467159bf71c65da7ab 402 SUPERFAMILY SSF53098 1 381 9.1E-68 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_14660 042427d03cd1c6467159bf71c65da7ab 402 Pfam PF01609 Transposase DDE domain 90 322 8.1E-24 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AL543_14660 042427d03cd1c6467159bf71c65da7ab 402 SUPERFAMILY SSF53098 1 381 9.1E-68 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_09140 042427d03cd1c6467159bf71c65da7ab 402 Pfam PF01609 Transposase DDE domain 90 322 8.1E-24 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AL543_09140 042427d03cd1c6467159bf71c65da7ab 402 SUPERFAMILY SSF53098 1 381 9.1E-68 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_03480 042427d03cd1c6467159bf71c65da7ab 402 Pfam PF01609 Transposase DDE domain 90 322 8.1E-24 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AL543_03480 042427d03cd1c6467159bf71c65da7ab 402 SUPERFAMILY SSF53098 1 381 9.1E-68 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_13330 042427d03cd1c6467159bf71c65da7ab 402 Pfam PF01609 Transposase DDE domain 90 322 8.1E-24 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AL543_13330 042427d03cd1c6467159bf71c65da7ab 402 SUPERFAMILY SSF53098 1 381 9.1E-68 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_10460 9a8238fbb5220acce5e3ac53c33fb1bc 598 Hamap MF_02094 Phosphogluconate dehydratase [edd]. 2 598 53.939 T 11-10-2018 AL543_10460 9a8238fbb5220acce5e3ac53c33fb1bc 598 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 3 596 6.6E-248 T 11-10-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 AL543_10460 9a8238fbb5220acce5e3ac53c33fb1bc 598 Pfam PF00920 Dehydratase family 67 594 1.6E-150 T 11-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL543_10460 9a8238fbb5220acce5e3ac53c33fb1bc 598 Gene3D G3DSA:3.50.30.80 418 565 3.8E-49 T 11-10-2018 AL543_10460 9a8238fbb5220acce5e3ac53c33fb1bc 598 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 155 165 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL543_10460 9a8238fbb5220acce5e3ac53c33fb1bc 598 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 504 515 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL543_10460 9a8238fbb5220acce5e3ac53c33fb1bc 598 SUPERFAMILY SSF143975 2 417 1.28E-130 T 11-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL543_10460 9a8238fbb5220acce5e3ac53c33fb1bc 598 SUPERFAMILY SSF52016 418 596 2.9E-53 T 11-10-2018 AL543_01640 9032a7bd14b4ee485f75dedf88dd3a48 616 SMART SM00052 344 596 4.0E-75 T 11-10-2018 IPR001633 EAL domain AL543_01640 9032a7bd14b4ee485f75dedf88dd3a48 616 SMART SM00267 169 334 4.2E-26 T 11-10-2018 IPR000160 GGDEF domain AL543_01640 9032a7bd14b4ee485f75dedf88dd3a48 616 Pfam PF00990 Diguanylate cyclase, GGDEF domain 181 328 5.2E-29 T 11-10-2018 IPR000160 GGDEF domain AL543_01640 9032a7bd14b4ee485f75dedf88dd3a48 616 Gene3D G3DSA:3.30.70.270 174 349 2.7E-39 T 11-10-2018 AL543_01640 9032a7bd14b4ee485f75dedf88dd3a48 616 SUPERFAMILY SSF55781 26 170 8.41E-8 T 11-10-2018 AL543_01640 9032a7bd14b4ee485f75dedf88dd3a48 616 Gene3D G3DSA:3.20.20.450 350 605 3.2E-75 T 11-10-2018 IPR035919 EAL domain superfamily AL543_01640 9032a7bd14b4ee485f75dedf88dd3a48 616 SUPERFAMILY SSF55073 185 335 3.14E-33 T 11-10-2018 IPR029787 Nucleotide cyclase AL543_01640 9032a7bd14b4ee485f75dedf88dd3a48 616 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 179 331 7.6E-26 T 11-10-2018 IPR000160 GGDEF domain AL543_01640 9032a7bd14b4ee485f75dedf88dd3a48 616 Pfam PF00563 EAL domain 361 590 8.6E-59 T 11-10-2018 IPR001633 EAL domain AL543_01640 9032a7bd14b4ee485f75dedf88dd3a48 616 SUPERFAMILY SSF141868 355 603 3.01E-72 T 11-10-2018 IPR035919 EAL domain superfamily AL543_18240 4a67eca1edeceb559c03e3a51a7ec71c 621 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 146 2.7E-33 T 11-10-2018 IPR002178 PTS EIIA type-2 domain AL543_18240 4a67eca1edeceb559c03e3a51a7ec71c 621 Pfam PF02378 Phosphotransferase system, EIIC 188 446 1.1E-12 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL543_18240 4a67eca1edeceb559c03e3a51a7ec71c 621 Gene3D G3DSA:3.40.50.2300 520 621 3.8E-33 T 11-10-2018 AL543_18240 4a67eca1edeceb559c03e3a51a7ec71c 621 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 528 610 2.2E-27 T 11-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 AL543_18240 4a67eca1edeceb559c03e3a51a7ec71c 621 SUPERFAMILY SSF52794 525 618 9.24E-28 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 AL543_18240 4a67eca1edeceb559c03e3a51a7ec71c 621 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 7 133 6.5E-37 T 11-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 AL543_18240 4a67eca1edeceb559c03e3a51a7ec71c 621 Gene3D G3DSA:3.40.930.10 2 148 3.1E-40 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AL543_18240 4a67eca1edeceb559c03e3a51a7ec71c 621 SUPERFAMILY SSF55804 2 146 1.16E-36 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AL543_18240 4a67eca1edeceb559c03e3a51a7ec71c 621 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 176 497 6.5E-78 T 11-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 AL543_18240 4a67eca1edeceb559c03e3a51a7ec71c 621 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 528 618 1.4E-14 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL543_15210 fc82567c598c04b4fef34cd3f3d137be 573 Gene3D G3DSA:1.20.1560.10 1 325 4.8E-24 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AL543_15210 fc82567c598c04b4fef34cd3f3d137be 573 SMART SM00382 365 552 8.4E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_15210 fc82567c598c04b4fef34cd3f3d137be 573 SUPERFAMILY SSF52540 332 571 6.84E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_15210 fc82567c598c04b4fef34cd3f3d137be 573 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_15210 fc82567c598c04b4fef34cd3f3d137be 573 Gene3D G3DSA:3.40.50.300 326 573 1.4E-75 T 11-10-2018 AL543_15210 fc82567c598c04b4fef34cd3f3d137be 573 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 6 533 2.2E-135 T 11-10-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0016021|GO:0034775|GO:0042626|GO:0045454 AL543_15210 fc82567c598c04b4fef34cd3f3d137be 573 SUPERFAMILY SSF90123 7 322 3.4E-36 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AL543_15210 fc82567c598c04b4fef34cd3f3d137be 573 Pfam PF00005 ABC transporter 357 502 5.8E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_14085 b2160a0d5fcb630fc77b27b2874cc5f1 554 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 372 1.7E-115 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 AL543_14085 b2160a0d5fcb630fc77b27b2874cc5f1 554 SUPERFAMILY SSF56235 1 196 2.66E-57 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL543_14085 b2160a0d5fcb630fc77b27b2874cc5f1 554 Gene3D G3DSA:3.40.50.620 194 514 1.6E-110 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL543_14085 b2160a0d5fcb630fc77b27b2874cc5f1 554 Gene3D G3DSA:3.60.20.10 2 193 2.4E-70 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL543_14085 b2160a0d5fcb630fc77b27b2874cc5f1 554 SUPERFAMILY SSF52402 210 479 1.9E-72 T 11-10-2018 AL543_14085 b2160a0d5fcb630fc77b27b2874cc5f1 554 Pfam PF13537 Glutamine amidotransferase domain 48 165 1.3E-40 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain AL543_14085 b2160a0d5fcb630fc77b27b2874cc5f1 554 Pfam PF00733 Asparagine synthase 211 366 2.6E-55 T 11-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 AL543_14085 b2160a0d5fcb630fc77b27b2874cc5f1 554 PIRSF PIRSF001589 363 510 6.3E-27 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 AL543_14085 b2160a0d5fcb630fc77b27b2874cc5f1 554 PIRSF PIRSF001589 1 383 4.2E-107 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 AL543_14305 0b13c7d9d794a10ad4ed42ff67fd2390 382 Gene3D G3DSA:3.40.50.300 104 360 2.9E-85 T 11-10-2018 AL543_14305 0b13c7d9d794a10ad4ed42ff67fd2390 382 Hamap MF_02040 Iron-sulfur cluster carrier protein. 113 362 36.889 T 11-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein AL543_14305 0b13c7d9d794a10ad4ed42ff67fd2390 382 SUPERFAMILY SSF52540 112 345 3.94E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_14305 0b13c7d9d794a10ad4ed42ff67fd2390 382 ProSitePatterns PS01215 Mrp family signature. 225 241 - T 11-10-2018 IPR000808 Mrp, conserved site GO:0005524 AL543_14305 0b13c7d9d794a10ad4ed42ff67fd2390 382 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 118 361 2.3E-101 T 11-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 AL543_13285 31c86dd7330fdee6b5d51a578c3a5839 313 Gene3D G3DSA:1.10.4200.10 58 306 6.4E-11 T 11-10-2018 AL543_13285 31c86dd7330fdee6b5d51a578c3a5839 313 Hamap MF_00397 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [citG]. 1 313 172.353 T 11-10-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 AL543_13285 31c86dd7330fdee6b5d51a578c3a5839 313 TIGRFAM TIGR03125 citrate_citG: triphosphoribosyl-dephospho-CoA synthase CitG 32 304 8.3E-117 T 11-10-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 AL543_13285 31c86dd7330fdee6b5d51a578c3a5839 313 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 34 302 9.4E-85 T 11-10-2018 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 AL543_01730 55554b9a7ca47e9100140b3e4035b68d 276 SUPERFAMILY SSF51215 34 157 1.31E-16 T 11-10-2018 IPR037923 Transcription regulator HTH-like AL543_01730 55554b9a7ca47e9100140b3e4035b68d 276 Gene3D G3DSA:1.10.10.60 180 234 1.6E-16 T 11-10-2018 AL543_01730 55554b9a7ca47e9100140b3e4035b68d 276 Gene3D G3DSA:1.10.10.60 235 276 5.3E-13 T 11-10-2018 AL543_01730 55554b9a7ca47e9100140b3e4035b68d 276 Pfam PF12833 Helix-turn-helix domain 198 275 1.4E-21 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL543_01730 55554b9a7ca47e9100140b3e4035b68d 276 Pfam PF02311 AraC-like ligand binding domain 21 152 1.0E-27 T 11-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AL543_01730 55554b9a7ca47e9100140b3e4035b68d 276 SMART SM00342 192 274 4.5E-31 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL543_01730 55554b9a7ca47e9100140b3e4035b68d 276 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 229 270 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL543_01730 55554b9a7ca47e9100140b3e4035b68d 276 SUPERFAMILY SSF46689 229 275 9.86E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_01730 55554b9a7ca47e9100140b3e4035b68d 276 SUPERFAMILY SSF46689 178 226 8.51E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_03140 a5ae1a02a60a6a5e6579d038bb06dcb6 388 PIRSF PIRSF500134 1 348 1.5E-119 T 11-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 AL543_03140 a5ae1a02a60a6a5e6579d038bb06dcb6 388 PIRSF PIRSF500134 340 388 1.5 T 11-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 AL543_03140 a5ae1a02a60a6a5e6579d038bb06dcb6 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 171 2.9E-31 T 11-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AL543_03140 a5ae1a02a60a6a5e6579d038bb06dcb6 388 SMART SM00984 300 387 1.2E-9 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AL543_03140 a5ae1a02a60a6a5e6579d038bb06dcb6 388 SUPERFAMILY SSF52413 283 387 6.41E-25 T 11-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 AL543_03140 a5ae1a02a60a6a5e6579d038bb06dcb6 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 2.9E-28 T 11-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AL543_03140 a5ae1a02a60a6a5e6579d038bb06dcb6 388 SUPERFAMILY SSF51735 1 194 6.68E-47 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_03140 a5ae1a02a60a6a5e6579d038bb06dcb6 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 378 3.5E-101 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AL543_03140 a5ae1a02a60a6a5e6579d038bb06dcb6 388 PIRSF PIRSF000124 1 388 2.3E-136 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AL543_03140 a5ae1a02a60a6a5e6579d038bb06dcb6 388 Gene3D G3DSA:3.40.50.720 1 193 1.7E-58 T 11-10-2018 AL543_03140 a5ae1a02a60a6a5e6579d038bb06dcb6 388 Gene3D G3DSA:3.40.50.720 222 388 6.0E-64 T 11-10-2018 AL543_03140 a5ae1a02a60a6a5e6579d038bb06dcb6 388 Gene3D G3DSA:1.20.5.100 194 220 2.8E-20 T 11-10-2018 AL543_03140 a5ae1a02a60a6a5e6579d038bb06dcb6 388 SUPERFAMILY SSF48179 191 287 7.99E-32 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AL543_13565 86d9956bde0336bb62e2bedc1b8c2d2c 626 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL543_13565 86d9956bde0336bb62e2bedc1b8c2d2c 626 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 624 2.7E-300 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL543_13565 86d9956bde0336bb62e2bedc1b8c2d2c 626 SUPERFAMILY SSF52518 10 381 2.55E-77 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AL543_13565 86d9956bde0336bb62e2bedc1b8c2d2c 626 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 14 282 9.1E-119 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL543_13565 86d9956bde0336bb62e2bedc1b8c2d2c 626 Pfam PF02779 Transketolase, pyrimidine binding domain 319 479 5.2E-38 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL543_13565 86d9956bde0336bb62e2bedc1b8c2d2c 626 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 625 45.841 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL543_13565 86d9956bde0336bb62e2bedc1b8c2d2c 626 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 11-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL543_13565 86d9956bde0336bb62e2bedc1b8c2d2c 626 Gene3D G3DSA:3.40.50.920 495 626 5.6E-41 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AL543_13565 86d9956bde0336bb62e2bedc1b8c2d2c 626 SUPERFAMILY SSF52922 492 624 5.63E-30 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AL543_13565 86d9956bde0336bb62e2bedc1b8c2d2c 626 SUPERFAMILY SSF52518 317 503 4.49E-57 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AL543_13565 86d9956bde0336bb62e2bedc1b8c2d2c 626 Pfam PF02780 Transketolase, C-terminal domain 506 616 4.7E-27 T 11-10-2018 IPR033248 Transketolase, C-terminal domain AL543_13565 86d9956bde0336bb62e2bedc1b8c2d2c 626 SMART SM00861 319 483 9.7E-64 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL543_13565 86d9956bde0336bb62e2bedc1b8c2d2c 626 Gene3D G3DSA:3.40.50.970 317 487 9.6E-66 T 11-10-2018 AL543_11380 fcd0e24b760ab1798a92583d1fb44ee4 390 Hamap MF_01454 GTPase Obg [obg]. 2 333 46.319 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AL543_11380 fcd0e24b760ab1798a92583d1fb44ee4 390 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 6.8E-142 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AL543_11380 fcd0e24b760ab1798a92583d1fb44ee4 390 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 11-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 AL543_11380 fcd0e24b760ab1798a92583d1fb44ee4 390 Gene3D G3DSA:3.40.50.300 159 335 8.7E-51 T 11-10-2018 AL543_11380 fcd0e24b760ab1798a92583d1fb44ee4 390 SUPERFAMILY SSF82051 2 157 2.88E-54 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily AL543_11380 fcd0e24b760ab1798a92583d1fb44ee4 390 Pfam PF01018 GTP1/OBG 4 156 1.3E-54 T 11-10-2018 IPR006169 GTP1/OBG domain AL543_11380 fcd0e24b760ab1798a92583d1fb44ee4 390 Gene3D G3DSA:2.70.210.12 1 158 9.2E-57 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily AL543_11380 fcd0e24b760ab1798a92583d1fb44ee4 390 Pfam PF01926 50S ribosome-binding GTPase 161 284 1.5E-23 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AL543_11380 fcd0e24b760ab1798a92583d1fb44ee4 390 PIRSF PIRSF002401 1 374 2.4E-135 T 11-10-2018 IPR035101 GTP-binding protein, Obg-type AL543_11380 fcd0e24b760ab1798a92583d1fb44ee4 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 2.5E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AL543_11380 fcd0e24b760ab1798a92583d1fb44ee4 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 2.5E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AL543_11380 fcd0e24b760ab1798a92583d1fb44ee4 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 2.5E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AL543_11380 fcd0e24b760ab1798a92583d1fb44ee4 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 2.5E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AL543_11380 fcd0e24b760ab1798a92583d1fb44ee4 390 SUPERFAMILY SSF52540 152 338 6.42E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_14205 4a730ff21132bf86d0e3003859127089 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 4.0E-90 T 11-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 AL543_14205 4a730ff21132bf86d0e3003859127089 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 1.5E-61 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 AL543_14205 4a730ff21132bf86d0e3003859127089 193 PIRSF PIRSF006102 1 193 1.9E-64 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 AL543_14205 4a730ff21132bf86d0e3003859127089 193 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 2 191 26.297 T 11-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 AL543_01230 515d643af760e8cd6ef8359a57df2221 522 PIRSF PIRSF002741 56 520 7.9E-69 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL543_01230 515d643af760e8cd6ef8359a57df2221 522 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 80 428 2.7E-66 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain AL543_01230 515d643af760e8cd6ef8359a57df2221 522 SUPERFAMILY SSF53850 63 517 2.17E-99 T 11-10-2018 AL543_01230 515d643af760e8cd6ef8359a57df2221 522 Gene3D G3DSA:3.10.105.10 265 492 2.4E-98 T 11-10-2018 AL543_01230 515d643af760e8cd6ef8359a57df2221 522 Gene3D G3DSA:3.40.190.10 71 504 2.4E-98 T 11-10-2018 AL543_12305 1bb80acf58b82d4bc01c4c53a0cfa315 446 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 4 445 46.963 T 11-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL543_12305 1bb80acf58b82d4bc01c4c53a0cfa315 446 SUPERFAMILY SSF53738 157 257 5.49E-29 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL543_12305 1bb80acf58b82d4bc01c4c53a0cfa315 446 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 376 442 1.8E-13 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL543_12305 1bb80acf58b82d4bc01c4c53a0cfa315 446 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 255 1.4E-18 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL543_12305 1bb80acf58b82d4bc01c4c53a0cfa315 446 SUPERFAMILY SSF55957 358 445 4.97E-22 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL543_12305 1bb80acf58b82d4bc01c4c53a0cfa315 446 SUPERFAMILY SSF53738 259 366 2.28E-28 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL543_12305 1bb80acf58b82d4bc01c4c53a0cfa315 446 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 8 443 5.5E-206 T 11-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL543_12305 1bb80acf58b82d4bc01c4c53a0cfa315 446 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 97 106 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL543_12305 1bb80acf58b82d4bc01c4c53a0cfa315 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 250 6.7E-13 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL543_12305 1bb80acf58b82d4bc01c4c53a0cfa315 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 96 110 6.7E-13 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL543_12305 1bb80acf58b82d4bc01c4c53a0cfa315 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 175 194 6.7E-13 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL543_12305 1bb80acf58b82d4bc01c4c53a0cfa315 446 SUPERFAMILY SSF53738 4 182 3.3E-48 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL543_12305 1bb80acf58b82d4bc01c4c53a0cfa315 446 Gene3D G3DSA:3.40.120.10 4 155 4.1E-48 T 11-10-2018 AL543_12305 1bb80acf58b82d4bc01c4c53a0cfa315 446 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 137 5.2E-45 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL543_12305 1bb80acf58b82d4bc01c4c53a0cfa315 446 Gene3D G3DSA:3.40.120.10 258 340 5.7E-60 T 11-10-2018 AL543_12305 1bb80acf58b82d4bc01c4c53a0cfa315 446 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 259 367 8.2E-30 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL543_12305 1bb80acf58b82d4bc01c4c53a0cfa315 446 Gene3D G3DSA:3.30.310.50 371 446 4.0E-25 T 11-10-2018 AL543_12305 1bb80acf58b82d4bc01c4c53a0cfa315 446 Gene3D G3DSA:3.40.120.10 175 363 5.7E-60 T 11-10-2018 AL543_10450 81f84765fe86192efbf082a91fb44242 458 PIRSF PIRSF002746 8 458 1.4E-144 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AL543_10450 81f84765fe86192efbf082a91fb44242 458 Pfam PF02447 GntP family permease 13 456 2.7E-118 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AL543_10450 81f84765fe86192efbf082a91fb44242 458 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 16 457 1.5E-105 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AL543_16360 878fcbb9c1582d7b931e23ad4ab2d2a8 430 Gene3D G3DSA:3.30.9.10 98 372 3.0E-72 T 11-10-2018 AL543_16360 878fcbb9c1582d7b931e23ad4ab2d2a8 430 Pfam PF01266 FAD dependent oxidoreductase 20 412 5.8E-65 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL543_16360 878fcbb9c1582d7b931e23ad4ab2d2a8 430 SUPERFAMILY SSF51905 19 430 1.32E-55 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_16360 878fcbb9c1582d7b931e23ad4ab2d2a8 430 Gene3D G3DSA:3.50.50.60 20 424 3.0E-72 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_11635 32d95e5db20b5cdc6ee04579e34da3fe 358 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 357 5.6E-181 T 11-10-2018 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 AL543_11635 32d95e5db20b5cdc6ee04579e34da3fe 358 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 354 1.3E-90 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AL543_11635 32d95e5db20b5cdc6ee04579e34da3fe 358 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 356 4.2E-111 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AL543_11635 32d95e5db20b5cdc6ee04579e34da3fe 358 SUPERFAMILY SSF51569 4 356 7.33E-131 T 11-10-2018 AL543_11635 32d95e5db20b5cdc6ee04579e34da3fe 358 Gene3D G3DSA:3.20.20.70 2 358 6.8E-148 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_11635 32d95e5db20b5cdc6ee04579e34da3fe 358 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 100 111 - T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AL543_11635 32d95e5db20b5cdc6ee04579e34da3fe 358 PIRSF PIRSF001359 13 358 4.7E-94 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AL543_11635 32d95e5db20b5cdc6ee04579e34da3fe 358 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 171 182 - T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AL543_10210 4004a66c337c2524c3434e91af9f23fd 164 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 16 118 0.007 T 11-10-2018 AL543_10210 4004a66c337c2524c3434e91af9f23fd 164 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 7 163 35.182 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AL543_10210 4004a66c337c2524c3434e91af9f23fd 164 Gene3D G3DSA:3.40.50.620 1 164 3.1E-54 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL543_10210 4004a66c337c2524c3434e91af9f23fd 164 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 9 161 4.4E-58 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AL543_10210 4004a66c337c2524c3434e91af9f23fd 164 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 8 68 1.4E-19 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AL543_10210 4004a66c337c2524c3434e91af9f23fd 164 SUPERFAMILY SSF52374 8 162 3.75E-44 T 11-10-2018 AL543_10210 4004a66c337c2524c3434e91af9f23fd 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 25 46 1.5E-49 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AL543_10210 4004a66c337c2524c3434e91af9f23fd 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 90 106 1.5E-49 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AL543_10210 4004a66c337c2524c3434e91af9f23fd 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 54 78 1.5E-49 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AL543_10210 4004a66c337c2524c3434e91af9f23fd 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 7 25 1.5E-49 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AL543_10210 4004a66c337c2524c3434e91af9f23fd 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 117 139 1.5E-49 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AL543_10210 4004a66c337c2524c3434e91af9f23fd 164 Pfam PF01467 Cytidylyltransferase-like 10 138 1.4E-19 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AL543_06795 59ac57cb243330ff02d9fa72d1141b06 486 SUPERFAMILY SSF53244 326 474 6.96E-48 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL543_06795 59ac57cb243330ff02d9fa72d1141b06 486 Gene3D G3DSA:3.90.190.20 325 484 1.5E-48 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL543_06795 59ac57cb243330ff02d9fa72d1141b06 486 Pfam PF02875 Mur ligase family, glutamate ligase domain 329 417 1.3E-21 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 AL543_06795 59ac57cb243330ff02d9fa72d1141b06 486 Gene3D G3DSA:3.40.50.720 23 110 6.3E-34 T 11-10-2018 AL543_06795 59ac57cb243330ff02d9fa72d1141b06 486 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 25 473 9.3E-192 T 11-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AL543_06795 59ac57cb243330ff02d9fa72d1141b06 486 SUPERFAMILY SSF53623 108 323 1.19E-72 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL543_06795 59ac57cb243330ff02d9fa72d1141b06 486 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 22 479 43.681 T 11-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AL543_06795 59ac57cb243330ff02d9fa72d1141b06 486 Pfam PF08245 Mur ligase middle domain 127 307 1.3E-29 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AL543_06795 59ac57cb243330ff02d9fa72d1141b06 486 SUPERFAMILY SSF51984 23 109 2.22E-28 T 11-10-2018 AL543_06795 59ac57cb243330ff02d9fa72d1141b06 486 Gene3D G3DSA:3.40.1190.10 111 324 1.5E-85 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL543_06795 59ac57cb243330ff02d9fa72d1141b06 486 Pfam PF01225 Mur ligase family, catalytic domain 25 121 3.0E-29 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AL543_16710 df63aa61dce00a14598e3974556ca236 639 Pfam PF12848 ABC transporter 224 298 8.6E-11 T 11-10-2018 IPR032781 ABC-transporter extension domain AL543_16710 df63aa61dce00a14598e3974556ca236 639 Gene3D G3DSA:3.40.50.300 11 279 2.9E-66 T 11-10-2018 AL543_16710 df63aa61dce00a14598e3974556ca236 639 Pfam PF00005 ABC transporter 19 185 2.3E-24 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_16710 df63aa61dce00a14598e3974556ca236 639 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_16710 df63aa61dce00a14598e3974556ca236 639 SMART SM00382 28 230 1.7E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_16710 df63aa61dce00a14598e3974556ca236 639 SMART SM00382 344 514 4.0E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_16710 df63aa61dce00a14598e3974556ca236 639 Pfam PF00005 ABC transporter 336 469 8.4E-25 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_16710 df63aa61dce00a14598e3974556ca236 639 Gene3D G3DSA:3.40.50.300 281 550 1.2E-67 T 11-10-2018 AL543_16710 df63aa61dce00a14598e3974556ca236 639 Pfam PF16326 ABC transporter C-terminal domain 564 632 3.0E-21 T 11-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 AL543_16710 df63aa61dce00a14598e3974556ca236 639 Gene3D G3DSA:1.10.287.380 554 637 1.9E-28 T 11-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 AL543_16710 df63aa61dce00a14598e3974556ca236 639 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_16710 df63aa61dce00a14598e3974556ca236 639 SUPERFAMILY SSF52540 3 245 8.13E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_16710 df63aa61dce00a14598e3974556ca236 639 SUPERFAMILY SSF52540 308 523 9.84E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_14980 1b220d9d6938f8d308e810ae8df34baa 357 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 5 164 1.9E-78 T 11-10-2018 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 AL543_14980 1b220d9d6938f8d308e810ae8df34baa 357 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 198 339 1.7E-66 T 11-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AL543_14980 1b220d9d6938f8d308e810ae8df34baa 357 Gene3D G3DSA:3.40.50.1000 1 164 1.9E-44 T 11-10-2018 IPR023214 HAD superfamily AL543_14980 1b220d9d6938f8d308e810ae8df34baa 357 SUPERFAMILY SSF54211 254 344 1.26E-31 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL543_14980 1b220d9d6938f8d308e810ae8df34baa 357 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 228 241 - T 11-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AL543_14980 1b220d9d6938f8d308e810ae8df34baa 357 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 147 5.0E-46 T 11-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 AL543_14980 1b220d9d6938f8d308e810ae8df34baa 357 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 4 357 51.126 T 11-10-2018 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 AL543_14980 1b220d9d6938f8d308e810ae8df34baa 357 SUPERFAMILY SSF56784 3 157 5.56E-38 T 11-10-2018 IPR036412 HAD-like superfamily AL543_14980 1b220d9d6938f8d308e810ae8df34baa 357 SUPERFAMILY SSF54211 169 253 4.17E-33 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL543_14980 1b220d9d6938f8d308e810ae8df34baa 357 Gene3D G3DSA:3.30.230.40 257 357 1.8E-36 T 11-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 AL543_14980 1b220d9d6938f8d308e810ae8df34baa 357 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 321 333 - T 11-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AL543_14980 1b220d9d6938f8d308e810ae8df34baa 357 Gene3D G3DSA:3.30.230.40 165 256 1.2E-36 T 11-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 AL543_14980 1b220d9d6938f8d308e810ae8df34baa 357 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 169 357 38.045 T 11-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AL543_14980 1b220d9d6938f8d308e810ae8df34baa 357 Pfam PF08645 Polynucleotide kinase 3 phosphatase 6 132 2.1E-5 T 11-10-2018 IPR013954 Polynucleotide kinase 3 phosphatase Reactome: R-HSA-5649702 AL543_14980 1b220d9d6938f8d308e810ae8df34baa 357 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 6 151 1.1E-27 T 11-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 AL543_03205 cb2be9a7183af55c2175f3641e7e3c4a 343 SUPERFAMILY SSF53383 9 341 6.97E-117 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL543_03205 cb2be9a7183af55c2175f3641e7e3c4a 343 Pfam PF01212 Beta-eliminating lyase 10 291 4.8E-98 T 11-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 AL543_03205 cb2be9a7183af55c2175f3641e7e3c4a 343 Gene3D G3DSA:3.40.640.10 6 251 7.2E-97 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL543_03205 cb2be9a7183af55c2175f3641e7e3c4a 343 PIRSF PIRSF017617 4 343 2.1E-132 T 11-10-2018 IPR023603 Threonine aldolase AL543_03205 cb2be9a7183af55c2175f3641e7e3c4a 343 Gene3D G3DSA:3.90.1150.10 252 343 1.1E-22 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL543_01200 c9815c5d15e065f21bf5dbc5bda06500 679 Gene3D G3DSA:3.30.450.20 162 281 2.4E-34 T 11-10-2018 AL543_01200 c9815c5d15e065f21bf5dbc5bda06500 679 Gene3D G3DSA:3.30.450.20 35 157 3.7E-30 T 11-10-2018 AL543_01200 c9815c5d15e065f21bf5dbc5bda06500 679 SUPERFAMILY SSF58104 346 626 1.07E-73 T 11-10-2018 AL543_01200 c9815c5d15e065f21bf5dbc5bda06500 679 Pfam PF13188 PAS domain 42 93 0.002 T 11-10-2018 IPR000014 PAS domain AL543_01200 c9815c5d15e065f21bf5dbc5bda06500 679 SMART SM00304 553 602 51.0 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_01200 c9815c5d15e065f21bf5dbc5bda06500 679 SMART SM00304 326 378 2.0E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_01200 c9815c5d15e065f21bf5dbc5bda06500 679 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 439 594 1.1E-53 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_01200 c9815c5d15e065f21bf5dbc5bda06500 679 Pfam PF00672 HAMP domain 327 374 3.8E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_01200 c9815c5d15e065f21bf5dbc5bda06500 679 Gene3D G3DSA:1.10.287.950 325 627 2.8E-87 T 11-10-2018 AL543_01200 c9815c5d15e065f21bf5dbc5bda06500 679 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 477 504 1.0E-53 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL543_01200 c9815c5d15e065f21bf5dbc5bda06500 679 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 400 429 1.0E-53 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL543_01200 c9815c5d15e065f21bf5dbc5bda06500 679 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 554 583 1.0E-53 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL543_01200 c9815c5d15e065f21bf5dbc5bda06500 679 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 506 535 1.0E-53 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL543_01200 c9815c5d15e065f21bf5dbc5bda06500 679 Pfam PF13426 PAS domain 179 281 0.008 T 11-10-2018 IPR000014 PAS domain AL543_01200 c9815c5d15e065f21bf5dbc5bda06500 679 SMART SM00283 379 626 3.0E-94 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_08760 dd3e431775700e6ef7b379b851329f58 338 PIRSF PIRSF015268 1 338 1.7E-135 T 11-10-2018 IPR011204 Virulence protein RhuM-like AL543_08760 dd3e431775700e6ef7b379b851329f58 338 Pfam PF13310 Virulence protein RhuM family 64 317 7.9E-109 T 11-10-2018 IPR011204 Virulence protein RhuM-like AL543_01905 396c119bb0212fef96e791a34b01e95a 266 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 11-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 AL543_01905 396c119bb0212fef96e791a34b01e95a 266 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 10 224 4.2E-21 T 11-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 AL543_01905 396c119bb0212fef96e791a34b01e95a 266 Gene3D G3DSA:3.40.50.1360 1 266 1.2E-121 T 11-10-2018 AL543_01905 396c119bb0212fef96e791a34b01e95a 266 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 41.358 T 11-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 AL543_01905 396c119bb0212fef96e791a34b01e95a 266 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 6.5E-140 T 11-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 AL543_01905 396c119bb0212fef96e791a34b01e95a 266 SUPERFAMILY SSF100950 1 262 3.98E-104 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AL543_13930 35f5c2eee4be9cc2972d49c712749a95 291 SUPERFAMILY SSF56176 198 280 5.18E-22 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AL543_13930 35f5c2eee4be9cc2972d49c712749a95 291 SUPERFAMILY SSF54631 54 190 5.61E-34 T 11-10-2018 AL543_13930 35f5c2eee4be9cc2972d49c712749a95 291 Pfam PF00571 CBS domain 67 124 1.9E-8 T 11-10-2018 IPR000644 CBS domain AL543_13930 35f5c2eee4be9cc2972d49c712749a95 291 Pfam PF00571 CBS domain 138 187 1.5E-6 T 11-10-2018 IPR000644 CBS domain AL543_13930 35f5c2eee4be9cc2972d49c712749a95 291 Pfam PF03471 Transporter associated domain 204 279 6.1E-22 T 11-10-2018 IPR005170 Transporter-associated domain AL543_13930 35f5c2eee4be9cc2972d49c712749a95 291 Gene3D G3DSA:3.30.465.10 196 289 2.0E-30 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AL543_13930 35f5c2eee4be9cc2972d49c712749a95 291 SMART SM00116 76 125 0.0037 T 11-10-2018 IPR000644 CBS domain AL543_13930 35f5c2eee4be9cc2972d49c712749a95 291 SMART SM00116 139 187 0.028 T 11-10-2018 IPR000644 CBS domain AL543_13930 35f5c2eee4be9cc2972d49c712749a95 291 Gene3D G3DSA:3.10.580.10 49 195 8.8E-54 T 11-10-2018 AL543_13930 35f5c2eee4be9cc2972d49c712749a95 291 SMART SM01091 203 281 1.6E-29 T 11-10-2018 IPR005170 Transporter-associated domain AL543_16195 7400aab841513d4c06e00b1a090d6583 339 SUPERFAMILY SSF53850 43 263 7.53E-33 T 11-10-2018 AL543_16195 7400aab841513d4c06e00b1a090d6583 339 Gene3D G3DSA:3.40.190.10 211 335 8.7E-7 T 11-10-2018 AL543_16195 7400aab841513d4c06e00b1a090d6583 339 Pfam PF09084 NMT1/THI5 like 53 262 2.0E-23 T 11-10-2018 IPR015168 SsuA/THI5-like AL543_16195 7400aab841513d4c06e00b1a090d6583 339 Gene3D G3DSA:3.40.190.10 40 132 3.5E-10 T 11-10-2018 AL543_16195 7400aab841513d4c06e00b1a090d6583 339 Gene3D G3DSA:3.40.190.10 133 210 1.2E-7 T 11-10-2018 AL543_07120 c52a3b5252c23eaa7eb2eb51c098848e 225 Pfam PF14622 Ribonuclease-III-like 19 139 6.4E-35 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 AL543_07120 c52a3b5252c23eaa7eb2eb51c098848e 225 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 AL543_07120 c52a3b5252c23eaa7eb2eb51c098848e 225 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 9 222 1.1E-75 T 11-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 AL543_07120 c52a3b5252c23eaa7eb2eb51c098848e 225 SMART SM00535 20 148 2.8E-58 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 AL543_07120 c52a3b5252c23eaa7eb2eb51c098848e 225 Gene3D G3DSA:3.30.160.20 153 224 5.1E-20 T 11-10-2018 AL543_07120 c52a3b5252c23eaa7eb2eb51c098848e 225 Pfam PF00035 Double-stranded RNA binding motif 155 222 5.2E-16 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain AL543_07120 c52a3b5252c23eaa7eb2eb51c098848e 225 SUPERFAMILY SSF54768 108 222 3.61E-29 T 11-10-2018 AL543_07120 c52a3b5252c23eaa7eb2eb51c098848e 225 SMART SM00358 155 223 3.1E-22 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain AL543_07120 c52a3b5252c23eaa7eb2eb51c098848e 225 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 219 30.247 T 11-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 AL543_07120 c52a3b5252c23eaa7eb2eb51c098848e 225 SUPERFAMILY SSF69065 6 158 2.79E-51 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 AL543_07120 c52a3b5252c23eaa7eb2eb51c098848e 225 Gene3D G3DSA:1.10.1520.10 2 145 1.2E-44 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 AL543_06060 2448b7e5c40b0d97235600141b935834 317 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 40 269 1.8E-77 T 11-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AL543_06060 2448b7e5c40b0d97235600141b935834 317 Gene3D G3DSA:3.40.710.10 19 315 2.4E-67 T 11-10-2018 AL543_06060 2448b7e5c40b0d97235600141b935834 317 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 124 141 9.7E-14 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AL543_06060 2448b7e5c40b0d97235600141b935834 317 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 151 164 9.7E-14 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AL543_06060 2448b7e5c40b0d97235600141b935834 317 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 74 85 9.7E-14 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AL543_06060 2448b7e5c40b0d97235600141b935834 317 SUPERFAMILY SSF56601 2 285 4.42E-61 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AL543_18660 aa482ff08e34488031d11a7e752b6038 374 PIRSF PIRSF000183 1 371 1.0E-156 T 11-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 AL543_18660 aa482ff08e34488031d11a7e752b6038 374 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 353 9.2E-84 T 11-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AL543_18660 aa482ff08e34488031d11a7e752b6038 374 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 4.1E-46 T 11-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AL543_18660 aa482ff08e34488031d11a7e752b6038 374 SUPERFAMILY SSF52283 1 360 1.28E-67 T 11-10-2018 AL543_18660 aa482ff08e34488031d11a7e752b6038 374 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 370 1.0E-156 T 11-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 AL543_18660 aa482ff08e34488031d11a7e752b6038 374 SMART SM01002 149 297 1.3E-87 T 11-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AL543_18660 aa482ff08e34488031d11a7e752b6038 374 Gene3D G3DSA:3.40.50.720 3 353 1.2E-136 T 11-10-2018 AL543_18660 aa482ff08e34488031d11a7e752b6038 374 SUPERFAMILY SSF51735 137 303 3.12E-49 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_18660 aa482ff08e34488031d11a7e752b6038 374 Gene3D G3DSA:3.40.50.720 130 305 1.2E-136 T 11-10-2018 AL543_18660 aa482ff08e34488031d11a7e752b6038 374 SMART SM01003 4 137 2.6E-79 T 11-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AL543_01185 1e3881e197d5ff8b199547aca0bdf8e3 348 SUPERFAMILY SSF52172 1 110 4.13E-28 T 11-10-2018 IPR011006 CheY-like superfamily AL543_01185 1e3881e197d5ff8b199547aca0bdf8e3 348 Gene3D G3DSA:3.40.50.180 146 346 1.7E-64 T 11-10-2018 IPR035909 Methylesterase CheB, C-terminal AL543_01185 1e3881e197d5ff8b199547aca0bdf8e3 348 SMART SM00448 4 121 1.6E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_01185 1e3881e197d5ff8b199547aca0bdf8e3 348 SUPERFAMILY SSF52738 153 342 2.09E-61 T 11-10-2018 IPR035909 Methylesterase CheB, C-terminal AL543_01185 1e3881e197d5ff8b199547aca0bdf8e3 348 PIRSF PIRSF000876 1 345 1.2E-122 T 11-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AL543_01185 1e3881e197d5ff8b199547aca0bdf8e3 348 Pfam PF01339 CheB methylesterase 157 334 2.3E-52 T 11-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AL543_01185 1e3881e197d5ff8b199547aca0bdf8e3 348 Gene3D G3DSA:3.40.50.2300 1 133 1.4E-30 T 11-10-2018 AL543_01185 1e3881e197d5ff8b199547aca0bdf8e3 348 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 4 341 36.653 T 11-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AL543_01185 1e3881e197d5ff8b199547aca0bdf8e3 348 Pfam PF00072 Response regulator receiver domain 6 111 1.7E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_02180 37623b351d43b8609077caf3009d125e 139 Pfam PF05025 RbsD / FucU transport protein family 1 138 3.1E-48 T 11-10-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 AL543_02180 37623b351d43b8609077caf3009d125e 139 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 139 32.699 T 11-10-2018 IPR023064 D-ribose pyranase GO:0016872 AL543_02180 37623b351d43b8609077caf3009d125e 139 Gene3D G3DSA:3.40.1650.10 8 136 9.4E-37 T 11-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 AL543_02180 37623b351d43b8609077caf3009d125e 139 SUPERFAMILY SSF102546 1 139 3.14E-44 T 11-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 AL543_20320 a106b77c092a44cd165e2c5473f7829a 434 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 2 416 7.4E-94 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G AL543_20320 a106b77c092a44cd165e2c5473f7829a 434 Pfam PF00460 Flagella basal body rod protein 3 32 2.0E-9 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AL543_20320 a106b77c092a44cd165e2c5473f7829a 434 Gene3D G3DSA:2.60.98.20 154 316 5.0E-23 T 11-10-2018 IPR037058 Flagellar hook protein FlgE superfamily AL543_20320 a106b77c092a44cd165e2c5473f7829a 434 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 8 28 - T 11-10-2018 IPR019776 Flagellar basal body rod protein, conserved site AL543_20320 a106b77c092a44cd165e2c5473f7829a 434 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 355 432 8.7E-15 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AL543_20320 a106b77c092a44cd165e2c5473f7829a 434 SUPERFAMILY SSF117143 78 395 6.28E-71 T 11-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like AL543_20320 a106b77c092a44cd165e2c5473f7829a 434 Pfam PF07559 Flagellar basal body protein FlaE 181 314 3.1E-22 T 11-10-2018 IPR011491 Flagellar hook protein FlgE AL543_11915 31c53442e13f3a6c058672b1458ba232 951 Gene3D G3DSA:3.30.830.10 274 470 1.5E-34 T 11-10-2018 AL543_11915 31c53442e13f3a6c058672b1458ba232 951 SUPERFAMILY SSF63411 520 721 4.15E-41 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL543_11915 31c53442e13f3a6c058672b1458ba232 951 Pfam PF00675 Insulinase (Peptidase family M16) 539 645 5.8E-9 T 11-10-2018 IPR011765 Peptidase M16, N-terminal AL543_11915 31c53442e13f3a6c058672b1458ba232 951 Pfam PF00675 Insulinase (Peptidase family M16) 62 154 2.0E-17 T 11-10-2018 IPR011765 Peptidase M16, N-terminal AL543_11915 31c53442e13f3a6c058672b1458ba232 951 Gene3D G3DSA:3.30.830.10 47 269 1.6E-65 T 11-10-2018 AL543_11915 31c53442e13f3a6c058672b1458ba232 951 Pfam PF05193 Peptidase M16 inactive domain 219 392 8.1E-30 T 11-10-2018 IPR007863 Peptidase M16, C-terminal AL543_11915 31c53442e13f3a6c058672b1458ba232 951 Pfam PF05193 Peptidase M16 inactive domain 685 856 2.4E-25 T 11-10-2018 IPR007863 Peptidase M16, C-terminal AL543_11915 31c53442e13f3a6c058672b1458ba232 951 SUPERFAMILY SSF63411 280 466 6.57E-32 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL543_11915 31c53442e13f3a6c058672b1458ba232 951 SUPERFAMILY SSF63411 49 258 5.67E-54 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL543_11915 31c53442e13f3a6c058672b1458ba232 951 Gene3D G3DSA:3.30.830.10 526 730 1.0E-39 T 11-10-2018 AL543_11915 31c53442e13f3a6c058672b1458ba232 951 SUPERFAMILY SSF63411 737 941 1.18E-39 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL543_11915 31c53442e13f3a6c058672b1458ba232 951 Gene3D G3DSA:3.30.830.10 739 936 8.2E-39 T 11-10-2018 AL543_18410 f512fe3a327dde4c6378ce6b2972c0f3 187 Gene3D G3DSA:1.20.1270.340 8 104 1.3E-15 T 11-10-2018 IPR038338 PriB/PriC superfamily AL543_18410 f512fe3a327dde4c6378ce6b2972c0f3 187 Pfam PF07445 Primosomal replication protein priC 11 184 2.0E-49 T 11-10-2018 IPR010890 Primosomal replication PriB/PriC AL543_06635 f6cd5160197d40ef43718068fe23ac5d 819 Pfam PF13840 ACT domain 393 456 8.5E-7 T 11-10-2018 IPR027795 CASTOR, ACT domain AL543_06635 f6cd5160197d40ef43718068fe23ac5d 819 PIRSF PIRSF000727 1 817 0.0 T 11-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AL543_06635 f6cd5160197d40ef43718068fe23ac5d 819 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 11-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AL543_06635 f6cd5160197d40ef43718068fe23ac5d 819 Gene3D G3DSA:3.40.50.720 467 811 7.4E-122 T 11-10-2018 AL543_06635 f6cd5160197d40ef43718068fe23ac5d 819 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 11-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AL543_06635 f6cd5160197d40ef43718068fe23ac5d 819 SUPERFAMILY SSF55021 304 381 5.6E-20 T 11-10-2018 AL543_06635 f6cd5160197d40ef43718068fe23ac5d 819 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 5.9E-129 T 11-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AL543_06635 f6cd5160197d40ef43718068fe23ac5d 819 Pfam PF00742 Homoserine dehydrogenase 614 810 1.7E-49 T 11-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AL543_06635 f6cd5160197d40ef43718068fe23ac5d 819 SUPERFAMILY SSF55021 383 476 2.7E-21 T 11-10-2018 AL543_06635 f6cd5160197d40ef43718068fe23ac5d 819 Gene3D G3DSA:3.40.1160.10 3 295 1.4E-86 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AL543_06635 f6cd5160197d40ef43718068fe23ac5d 819 Pfam PF01842 ACT domain 324 378 5.3E-8 T 11-10-2018 IPR002912 ACT domain AL543_06635 f6cd5160197d40ef43718068fe23ac5d 819 Gene3D G3DSA:1.20.120.1320 41 142 1.4E-86 T 11-10-2018 AL543_06635 f6cd5160197d40ef43718068fe23ac5d 819 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 606 6.4E-27 T 11-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 AL543_06635 f6cd5160197d40ef43718068fe23ac5d 819 SUPERFAMILY SSF55347 614 797 3.14E-50 T 11-10-2018 AL543_06635 f6cd5160197d40ef43718068fe23ac5d 819 Pfam PF00696 Amino acid kinase family 2 284 1.6E-51 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AL543_06635 f6cd5160197d40ef43718068fe23ac5d 819 SUPERFAMILY SSF53633 1 298 1.83E-76 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AL543_06635 f6cd5160197d40ef43718068fe23ac5d 819 Gene3D G3DSA:3.30.360.10 625 795 7.4E-122 T 11-10-2018 AL543_06635 f6cd5160197d40ef43718068fe23ac5d 819 Gene3D G3DSA:3.30.2130.10 303 464 3.4E-43 T 11-10-2018 AL543_06635 f6cd5160197d40ef43718068fe23ac5d 819 SUPERFAMILY SSF51735 463 636 6.89E-38 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_08865 c7f3120961a2d3e5b515f33b0556f4f6 275 ProSitePatterns PS01228 Hypothetical cof family signature 1. 12 23 - T 11-10-2018 AL543_08865 c7f3120961a2d3e5b515f33b0556f4f6 275 Gene3D G3DSA:3.40.50.1000 13 266 3.7E-75 T 11-10-2018 IPR023214 HAD superfamily AL543_08865 c7f3120961a2d3e5b515f33b0556f4f6 275 Pfam PF08282 haloacid dehalogenase-like hydrolase 13 270 3.3E-68 T 11-10-2018 AL543_08865 c7f3120961a2d3e5b515f33b0556f4f6 275 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 12 270 1.9E-61 T 11-10-2018 IPR000150 Cof family GO:0016787 AL543_08865 c7f3120961a2d3e5b515f33b0556f4f6 275 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 12 241 1.3E-32 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AL543_08865 c7f3120961a2d3e5b515f33b0556f4f6 275 SUPERFAMILY SSF56784 8 274 1.49E-69 T 11-10-2018 IPR036412 HAD-like superfamily AL543_08865 c7f3120961a2d3e5b515f33b0556f4f6 275 Gene3D G3DSA:3.30.1240.10 90 197 3.7E-75 T 11-10-2018 AL543_08865 c7f3120961a2d3e5b515f33b0556f4f6 275 ProSitePatterns PS01229 Hypothetical cof family signature 2. 222 244 - T 11-10-2018 AL543_04335 6aa1ade9291c3f731334205f733cbbc0 324 SUPERFAMILY SSF46689 210 257 7.53E-5 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_04335 6aa1ade9291c3f731334205f733cbbc0 324 Pfam PF12833 Helix-turn-helix domain 230 306 1.7E-21 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL543_04335 6aa1ade9291c3f731334205f733cbbc0 324 Gene3D G3DSA:1.10.10.60 208 315 1.2E-27 T 11-10-2018 AL543_04335 6aa1ade9291c3f731334205f733cbbc0 324 SMART SM00342 224 307 6.2E-31 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL543_04335 6aa1ade9291c3f731334205f733cbbc0 324 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 276 291 1.9E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL543_04335 6aa1ade9291c3f731334205f733cbbc0 324 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 291 307 1.9E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL543_04335 6aa1ade9291c3f731334205f733cbbc0 324 SUPERFAMILY SSF46689 261 306 2.33E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_04410 e8a6d58e65b8e99cc30dad377397c0b3 218 SUPERFAMILY SSF52172 4 117 7.12E-28 T 11-10-2018 IPR011006 CheY-like superfamily AL543_04410 e8a6d58e65b8e99cc30dad377397c0b3 218 SMART SM00448 3 111 4.4E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_04410 e8a6d58e65b8e99cc30dad377397c0b3 218 Gene3D G3DSA:3.40.50.2300 1 116 1.2E-28 T 11-10-2018 AL543_04410 e8a6d58e65b8e99cc30dad377397c0b3 218 SMART SM00862 145 216 4.7E-27 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL543_04410 e8a6d58e65b8e99cc30dad377397c0b3 218 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 5.6E-24 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL543_04410 e8a6d58e65b8e99cc30dad377397c0b3 218 SUPERFAMILY SSF46894 121 216 7.65E-30 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL543_04410 e8a6d58e65b8e99cc30dad377397c0b3 218 Pfam PF00072 Response regulator receiver domain 6 112 1.2E-16 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_04410 e8a6d58e65b8e99cc30dad377397c0b3 218 Gene3D G3DSA:1.10.10.10 117 218 4.1E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_16115 ebf14137e38d9f21eaa84f457b393ed0 978 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 806 967 5.3E-38 T 11-10-2018 IPR000160 GGDEF domain AL543_16115 ebf14137e38d9f21eaa84f457b393ed0 978 SUPERFAMILY SSF63829 395 579 5.36E-12 T 11-10-2018 AL543_16115 ebf14137e38d9f21eaa84f457b393ed0 978 SUPERFAMILY SSF63829 184 486 3.01E-7 T 11-10-2018 AL543_16115 ebf14137e38d9f21eaa84f457b393ed0 978 Gene3D G3DSA:2.130.10.10 26 121 1.1E-8 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AL543_16115 ebf14137e38d9f21eaa84f457b393ed0 978 Gene3D G3DSA:2.130.10.10 127 374 1.5E-30 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AL543_16115 ebf14137e38d9f21eaa84f457b393ed0 978 SMART SM00267 798 968 1.4E-34 T 11-10-2018 IPR000160 GGDEF domain AL543_16115 ebf14137e38d9f21eaa84f457b393ed0 978 Gene3D G3DSA:3.30.70.270 794 967 3.4E-46 T 11-10-2018 AL543_16115 ebf14137e38d9f21eaa84f457b393ed0 978 Gene3D G3DSA:2.130.10.10 377 638 1.5E-44 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AL543_16115 ebf14137e38d9f21eaa84f457b393ed0 978 Gene3D G3DSA:2.60.40.10 643 758 2.1E-23 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL543_16115 ebf14137e38d9f21eaa84f457b393ed0 978 Pfam PF07494 Two component regulator propeller 293 315 0.0044 T 11-10-2018 IPR011110 Two component regulator propeller AL543_16115 ebf14137e38d9f21eaa84f457b393ed0 978 Pfam PF07494 Two component regulator propeller 420 443 2.5E-6 T 11-10-2018 IPR011110 Two component regulator propeller AL543_16115 ebf14137e38d9f21eaa84f457b393ed0 978 Pfam PF07494 Two component regulator propeller 46 68 2.4E-4 T 11-10-2018 IPR011110 Two component regulator propeller AL543_16115 ebf14137e38d9f21eaa84f457b393ed0 978 Pfam PF07495 Y_Y_Y domain 685 747 1.4E-18 T 11-10-2018 IPR011123 Two component regulator three Y AL543_16115 ebf14137e38d9f21eaa84f457b393ed0 978 SUPERFAMILY SSF55073 814 966 1.96E-39 T 11-10-2018 IPR029787 Nucleotide cyclase AL543_16115 ebf14137e38d9f21eaa84f457b393ed0 978 Pfam PF00990 Diguanylate cyclase, GGDEF domain 811 964 9.6E-35 T 11-10-2018 IPR000160 GGDEF domain AL543_16115 ebf14137e38d9f21eaa84f457b393ed0 978 SUPERFAMILY SSF63829 34 222 1.99E-5 T 11-10-2018 AL543_14045 0ac5a539fdbb3d07898ffd05646e5c6b 97 Pfam PF10262 Rdx family 6 78 1.4E-32 T 11-10-2018 IPR011893 Selenoprotein, Rdx-type AL543_14045 0ac5a539fdbb3d07898ffd05646e5c6b 97 Gene3D G3DSA:3.40.30.10 1 97 1.0E-40 T 11-10-2018 AL543_14045 0ac5a539fdbb3d07898ffd05646e5c6b 97 TIGRFAM TIGR02174 CXXU_selWTH: selT/selW/selH selenoprotein domain 6 77 9.0E-26 T 11-10-2018 IPR011893 Selenoprotein, Rdx-type AL543_14045 0ac5a539fdbb3d07898ffd05646e5c6b 97 SUPERFAMILY SSF52833 5 87 1.41E-29 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL543_10000 018f6aadf879c39fd40603abafe9b02b 156 Gene3D G3DSA:3.40.140.10 14 153 1.6E-11 T 11-10-2018 AL543_10000 018f6aadf879c39fd40603abafe9b02b 156 SUPERFAMILY SSF102712 37 120 2.75E-8 T 11-10-2018 AL543_10000 018f6aadf879c39fd40603abafe9b02b 156 TIGRFAM TIGR02256 ICE_VC0181: conserved hypothetical protein 22 152 1.3E-68 T 11-10-2018 IPR011952 Conserved hypothetical protein CHP02256 AL543_10000 018f6aadf879c39fd40603abafe9b02b 156 Pfam PF14464 Prokaryotic homologs of the JAB domain 25 138 1.4E-18 T 11-10-2018 IPR028090 JAB domain, prokaryotic AL543_10000 018f6aadf879c39fd40603abafe9b02b 156 PIRSF PIRSF028170 1 156 8.8E-82 T 11-10-2018 IPR011952 Conserved hypothetical protein CHP02256 AL543_02185 9b5f109c03cf88a414b242a7fed9d7b3 500 Pfam PF00005 ABC transporter 22 170 2.5E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_02185 9b5f109c03cf88a414b242a7fed9d7b3 500 SUPERFAMILY SSF52540 269 474 4.0E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_02185 9b5f109c03cf88a414b242a7fed9d7b3 500 Gene3D G3DSA:3.40.50.300 1 247 6.2E-57 T 11-10-2018 AL543_02185 9b5f109c03cf88a414b242a7fed9d7b3 500 Gene3D G3DSA:3.40.50.300 266 492 1.8E-46 T 11-10-2018 AL543_02185 9b5f109c03cf88a414b242a7fed9d7b3 500 SMART SM00382 30 219 1.5E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_02185 9b5f109c03cf88a414b242a7fed9d7b3 500 SMART SM00382 278 472 6.2E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_02185 9b5f109c03cf88a414b242a7fed9d7b3 500 ProSitePatterns PS00211 ABC transporters family signature. 396 410 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_02185 9b5f109c03cf88a414b242a7fed9d7b3 500 SUPERFAMILY SSF52540 5 224 5.33E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_02185 9b5f109c03cf88a414b242a7fed9d7b3 500 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_02185 9b5f109c03cf88a414b242a7fed9d7b3 500 Pfam PF00005 ABC transporter 270 423 1.5E-23 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_01535 c42fa88301d19fd37eaa8dbbac7e922b 507 Gene3D G3DSA:1.25.40.10 183 329 5.0E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_01535 c42fa88301d19fd37eaa8dbbac7e922b 507 SUPERFAMILY SSF48452 58 175 6.64E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_01535 c42fa88301d19fd37eaa8dbbac7e922b 507 SUPERFAMILY SSF48452 135 326 5.01E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_01535 c42fa88301d19fd37eaa8dbbac7e922b 507 SMART SM00028 219 252 2.9 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL543_01535 c42fa88301d19fd37eaa8dbbac7e922b 507 SMART SM00028 59 92 500.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL543_01535 c42fa88301d19fd37eaa8dbbac7e922b 507 SMART SM00028 259 292 160.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL543_01535 c42fa88301d19fd37eaa8dbbac7e922b 507 SMART SM00028 139 172 29.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL543_01535 c42fa88301d19fd37eaa8dbbac7e922b 507 Gene3D G3DSA:1.25.40.10 29 182 2.9E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_04625 3abfaccf70534dfc8cfacd3a8134cb4c 378 SUPERFAMILY SSF51556 56 346 1.41E-84 T 11-10-2018 IPR032466 Metal-dependent hydrolase AL543_04625 3abfaccf70534dfc8cfacd3a8134cb4c 378 Gene3D G3DSA:2.30.40.10 10 374 5.1E-105 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AL543_04625 3abfaccf70534dfc8cfacd3a8134cb4c 378 Pfam PF01979 Amidohydrolase family 53 368 3.9E-14 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AL543_04625 3abfaccf70534dfc8cfacd3a8134cb4c 378 SUPERFAMILY SSF51338 4 55 2.03E-10 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AL543_04625 3abfaccf70534dfc8cfacd3a8134cb4c 378 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 5 369 1.2E-85 T 11-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 AL543_04625 3abfaccf70534dfc8cfacd3a8134cb4c 378 PIRSF PIRSF038994 4 378 1.5E-95 T 11-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 AL543_04625 3abfaccf70534dfc8cfacd3a8134cb4c 378 Gene3D G3DSA:3.20.20.140 57 343 5.1E-105 T 11-10-2018 AL543_19075 4caddce292081fcf6396aed145dcff1d 270 SUPERFAMILY SSF52540 1 268 2.84E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_19075 4caddce292081fcf6396aed145dcff1d 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 3 268 1.8E-110 T 11-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 AL543_19075 4caddce292081fcf6396aed145dcff1d 270 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 227 3.1E-19 T 11-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AL543_19075 4caddce292081fcf6396aed145dcff1d 270 PIRSF PIRSF003092 1 270 1.4E-94 T 11-10-2018 IPR025501 ATP binding protein MinD AL543_19075 4caddce292081fcf6396aed145dcff1d 270 Gene3D G3DSA:3.40.50.300 1 260 2.3E-73 T 11-10-2018 AL543_08140 93ee3c62db67479aa1f46dbad7a647b1 188 Gene3D G3DSA:2.40.50.140 66 129 4.0E-28 T 11-10-2018 AL543_08140 93ee3c62db67479aa1f46dbad7a647b1 188 SMART SM00841 131 186 9.2E-31 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AL543_08140 93ee3c62db67479aa1f46dbad7a647b1 188 SUPERFAMILY SSF50249 70 128 1.93E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL543_08140 93ee3c62db67479aa1f46dbad7a647b1 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 61 4.8E-25 T 11-10-2018 IPR013185 Translation elongation factor, KOW-like AL543_08140 93ee3c62db67479aa1f46dbad7a647b1 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 49.005 T 11-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 AL543_08140 93ee3c62db67479aa1f46dbad7a647b1 188 Gene3D G3DSA:2.30.30.30 1 64 3.1E-26 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 AL543_08140 93ee3c62db67479aa1f46dbad7a647b1 188 PIRSF PIRSF005901 2 188 3.7E-63 T 11-10-2018 IPR020599 Translation elongation factor P/YeiP AL543_08140 93ee3c62db67479aa1f46dbad7a647b1 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 1.8E-21 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AL543_08140 93ee3c62db67479aa1f46dbad7a647b1 188 SUPERFAMILY SSF50104 2 64 2.31E-20 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily AL543_08140 93ee3c62db67479aa1f46dbad7a647b1 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 11-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site AL543_08140 93ee3c62db67479aa1f46dbad7a647b1 188 SUPERFAMILY SSF50249 130 187 3.6E-18 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL543_08140 93ee3c62db67479aa1f46dbad7a647b1 188 SMART SM01185 69 123 2.6E-24 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AL543_08140 93ee3c62db67479aa1f46dbad7a647b1 188 TIGRFAM TIGR00038 efp: translation elongation factor P 5 187 2.1E-76 T 11-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 AL543_08140 93ee3c62db67479aa1f46dbad7a647b1 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 9.3E-25 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AL543_08140 93ee3c62db67479aa1f46dbad7a647b1 188 Gene3D G3DSA:2.40.50.140 130 188 4.1E-27 T 11-10-2018 AL543_11840 525a486962fda3bd281d45e75f53f9fc 395 SUPERFAMILY SSF53633 6 245 9.43E-77 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AL543_11840 525a486962fda3bd281d45e75f53f9fc 395 Pfam PF00696 Amino acid kinase family 5 231 5.6E-54 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AL543_11840 525a486962fda3bd281d45e75f53f9fc 395 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 5 379 1.5E-96 T 11-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AL543_11840 525a486962fda3bd281d45e75f53f9fc 395 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 11-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AL543_11840 525a486962fda3bd281d45e75f53f9fc 395 Gene3D G3DSA:3.30.2130.10 246 381 1.1E-6 T 11-10-2018 AL543_11840 525a486962fda3bd281d45e75f53f9fc 395 Gene3D G3DSA:3.40.1160.10 4 244 3.7E-83 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AL543_11840 525a486962fda3bd281d45e75f53f9fc 395 PIRSF PIRSF000726 3 64 3.7E-22 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AL543_11840 525a486962fda3bd281d45e75f53f9fc 395 PIRSF PIRSF000726 56 386 1.0E-77 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AL543_13400 a0611a2b27d1f5e5529d65aed98730ed 136 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 24 129 34.627 T 11-10-2018 IPR026592 Outer membrane protein assembly factor BamE AL543_13400 a0611a2b27d1f5e5529d65aed98730ed 136 Pfam PF04355 SmpA / OmlA family 52 121 8.1E-26 T 11-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 AL543_13400 a0611a2b27d1f5e5529d65aed98730ed 136 Gene3D G3DSA:3.30.1450.10 51 130 6.8E-24 T 11-10-2018 IPR037873 BamE-like AL543_11290 97214bdabee671f72057e36877e6b02f 494 SUPERFAMILY SSF51338 16 488 1.93E-14 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AL543_11290 97214bdabee671f72057e36877e6b02f 494 Pfam PF07969 Amidohydrolase family 62 471 8.7E-39 T 11-10-2018 IPR013108 Amidohydrolase 3 AL543_11290 97214bdabee671f72057e36877e6b02f 494 Gene3D G3DSA:2.30.40.10 15 440 1.5E-169 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AL543_11290 97214bdabee671f72057e36877e6b02f 494 SUPERFAMILY SSF51556 69 427 3.74E-84 T 11-10-2018 IPR032466 Metal-dependent hydrolase AL543_11290 97214bdabee671f72057e36877e6b02f 494 Gene3D G3DSA:3.20.20.140 68 427 1.5E-169 T 11-10-2018 AL543_11290 97214bdabee671f72057e36877e6b02f 494 Gene3D G3DSA:3.30.1490.130 296 352 1.5E-169 T 11-10-2018 IPR023100 D-aminoacylase, insert domain superfamily GO:0016811 AL543_09345 973578e87bd8fe108d6c80cfe0aa54c0 545 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 244 258 2.1E-20 T 11-10-2018 AL543_09345 973578e87bd8fe108d6c80cfe0aa54c0 545 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 360 384 2.1E-20 T 11-10-2018 AL543_09345 973578e87bd8fe108d6c80cfe0aa54c0 545 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 210 226 2.1E-20 T 11-10-2018 AL543_09345 973578e87bd8fe108d6c80cfe0aa54c0 545 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 325 337 2.1E-20 T 11-10-2018 AL543_09345 973578e87bd8fe108d6c80cfe0aa54c0 545 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 7 518 5.4E-113 T 11-10-2018 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 AL543_09345 973578e87bd8fe108d6c80cfe0aa54c0 545 SUPERFAMILY SSF53335 8 541 1.73E-131 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL543_09345 973578e87bd8fe108d6c80cfe0aa54c0 545 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 328 334 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AL543_09345 973578e87bd8fe108d6c80cfe0aa54c0 545 Gene3D G3DSA:1.20.1260.30 1 203 3.2E-49 T 11-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily AL543_09345 973578e87bd8fe108d6c80cfe0aa54c0 545 Pfam PF02384 N-6 DNA Methylase 186 507 1.4E-105 T 11-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 AL543_09345 973578e87bd8fe108d6c80cfe0aa54c0 545 Gene3D G3DSA:3.40.50.150 208 501 4.7E-90 T 11-10-2018 AL543_09345 973578e87bd8fe108d6c80cfe0aa54c0 545 Pfam PF12161 HsdM N-terminal domain 9 175 1.5E-26 T 11-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain AL543_11125 0fe24fc564537b08fb4f56a09ff931cb 214 Gene3D G3DSA:3.40.50.2300 11 143 3.8E-21 T 11-10-2018 AL543_11125 0fe24fc564537b08fb4f56a09ff931cb 214 SUPERFAMILY SSF46894 139 211 6.8E-20 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL543_11125 0fe24fc564537b08fb4f56a09ff931cb 214 Gene3D G3DSA:1.10.10.10 145 214 1.8E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_11125 0fe24fc564537b08fb4f56a09ff931cb 214 SMART SM00421 152 209 5.7E-20 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_11125 0fe24fc564537b08fb4f56a09ff931cb 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 4.4E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_11125 0fe24fc564537b08fb4f56a09ff931cb 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 4.4E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_11125 0fe24fc564537b08fb4f56a09ff931cb 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 4.4E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_11125 0fe24fc564537b08fb4f56a09ff931cb 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 208 4.3E-20 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_12335 326fd60276fcb7d491b7d95d69610c41 495 SUPERFAMILY SSF54814 279 342 4.32E-15 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 AL543_12335 326fd60276fcb7d491b7d95d69610c41 495 Gene3D G3DSA:1.10.150.20 352 421 1.7E-28 T 11-10-2018 AL543_12335 326fd60276fcb7d491b7d95d69610c41 495 SMART SM00322 230 293 34.0 T 11-10-2018 IPR004087 K Homology domain GO:0003676 AL543_12335 326fd60276fcb7d491b7d95d69610c41 495 SMART SM00322 301 375 0.027 T 11-10-2018 IPR004087 K Homology domain GO:0003676 AL543_12335 326fd60276fcb7d491b7d95d69610c41 495 Gene3D G3DSA:1.10.150.20 431 490 9.7E-24 T 11-10-2018 AL543_12335 326fd60276fcb7d491b7d95d69610c41 495 Gene3D G3DSA:2.40.50.140 135 198 1.1E-17 T 11-10-2018 AL543_12335 326fd60276fcb7d491b7d95d69610c41 495 SUPERFAMILY SSF47794 429 492 4.08E-16 T 11-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 AL543_12335 326fd60276fcb7d491b7d95d69610c41 495 Gene3D G3DSA:3.30.300.20 199 277 5.6E-30 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AL543_12335 326fd60276fcb7d491b7d95d69610c41 495 Gene3D G3DSA:3.30.1480.10 1 129 1.2E-43 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 AL543_12335 326fd60276fcb7d491b7d95d69610c41 495 SMART SM00316 133 198 1.6E-6 T 11-10-2018 IPR022967 RNA-binding domain, S1 AL543_12335 326fd60276fcb7d491b7d95d69610c41 495 Pfam PF08529 NusA N-terminal domain 4 123 1.2E-34 T 11-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 AL543_12335 326fd60276fcb7d491b7d95d69610c41 495 SUPERFAMILY SSF50249 132 199 9.43E-17 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL543_12335 326fd60276fcb7d491b7d95d69610c41 495 SUPERFAMILY SSF47794 349 414 2.04E-16 T 11-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 AL543_12335 326fd60276fcb7d491b7d95d69610c41 495 Pfam PF13184 NusA-like KH domain 230 297 3.6E-27 T 11-10-2018 IPR025249 KH domain, NusA-like GO:0003723 AL543_12335 326fd60276fcb7d491b7d95d69610c41 495 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 1.8E-125 T 11-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 AL543_12335 326fd60276fcb7d491b7d95d69610c41 495 SUPERFAMILY SSF69705 1 126 2.35E-39 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 AL543_12335 326fd60276fcb7d491b7d95d69610c41 495 SUPERFAMILY SSF54814 201 278 1.9E-28 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 AL543_12335 326fd60276fcb7d491b7d95d69610c41 495 Pfam PF14520 Helix-hairpin-helix domain 432 486 8.6E-8 T 11-10-2018 AL543_12335 326fd60276fcb7d491b7d95d69610c41 495 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 424 28.832 T 11-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 AL543_12335 326fd60276fcb7d491b7d95d69610c41 495 Gene3D G3DSA:3.30.300.20 278 344 2.2E-24 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AL543_12335 326fd60276fcb7d491b7d95d69610c41 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 440 489 1.2E-17 T 11-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication AL543_12335 326fd60276fcb7d491b7d95d69610c41 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 365 414 1.4E-21 T 11-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication AL543_13030 0dfff5b3fead06a142502681fb5b4ba3 494 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 205 370 6.2E-25 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL543_13030 0dfff5b3fead06a142502681fb5b4ba3 494 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 156 3.6E-21 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL543_13030 0dfff5b3fead06a142502681fb5b4ba3 494 Hamap MF_00195 GTPase Der [der]. 2 464 39.14 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 AL543_13030 0dfff5b3fead06a142502681fb5b4ba3 494 Gene3D G3DSA:3.40.50.300 201 378 7.9E-49 T 11-10-2018 AL543_13030 0dfff5b3fead06a142502681fb5b4ba3 494 Gene3D G3DSA:3.40.50.300 2 160 7.7E-43 T 11-10-2018 AL543_13030 0dfff5b3fead06a142502681fb5b4ba3 494 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 461 1.8E-181 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 AL543_13030 0dfff5b3fead06a142502681fb5b4ba3 494 SUPERFAMILY SSF52540 4 167 3.97E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_13030 0dfff5b3fead06a142502681fb5b4ba3 494 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 5.5E-10 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AL543_13030 0dfff5b3fead06a142502681fb5b4ba3 494 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 5.5E-10 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AL543_13030 0dfff5b3fead06a142502681fb5b4ba3 494 Pfam PF01926 50S ribosome-binding GTPase 208 325 2.1E-24 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AL543_13030 0dfff5b3fead06a142502681fb5b4ba3 494 Pfam PF01926 50S ribosome-binding GTPase 5 119 2.4E-27 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AL543_13030 0dfff5b3fead06a142502681fb5b4ba3 494 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 381 460 1.1E-25 T 11-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like AL543_13030 0dfff5b3fead06a142502681fb5b4ba3 494 Gene3D G3DSA:3.30.300.20 381 463 5.1E-20 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AL543_13030 0dfff5b3fead06a142502681fb5b4ba3 494 PIRSF PIRSF006485 1 469 5.4E-182 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 AL543_13030 0dfff5b3fead06a142502681fb5b4ba3 494 SUPERFAMILY SSF52540 137 467 2.64E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_15545 81c7d67319f3cb507e94e1656e08a648 536 SMART SM00283 274 535 9.4E-67 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_15545 81c7d67319f3cb507e94e1656e08a648 536 SUPERFAMILY SSF58104 227 536 1.83E-69 T 11-10-2018 AL543_15545 81c7d67319f3cb507e94e1656e08a648 536 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 323 501 8.7E-43 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_15545 81c7d67319f3cb507e94e1656e08a648 536 Pfam PF00672 HAMP domain 207 250 1.6E-9 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_15545 81c7d67319f3cb507e94e1656e08a648 536 SMART SM01049 36 126 4.8E-21 T 11-10-2018 IPR033480 Single Cache domain 2 AL543_15545 81c7d67319f3cb507e94e1656e08a648 536 Gene3D G3DSA:3.30.450.20 35 184 1.1E-31 T 11-10-2018 AL543_15545 81c7d67319f3cb507e94e1656e08a648 536 Pfam PF17200 Single Cache domain 2 42 182 1.2E-26 T 11-10-2018 IPR033480 Single Cache domain 2 AL543_15545 81c7d67319f3cb507e94e1656e08a648 536 SMART SM00304 260 312 31.0 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_15545 81c7d67319f3cb507e94e1656e08a648 536 SMART SM00304 207 259 6.4E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_15545 81c7d67319f3cb507e94e1656e08a648 536 Gene3D G3DSA:1.10.287.950 207 536 8.8E-73 T 11-10-2018 AL543_19685 6e1265316a8cd044a43b530ff391c55f 577 Gene3D G3DSA:3.40.50.620 108 454 1.6E-109 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL543_19685 6e1265316a8cd044a43b530ff391c55f 577 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL543_19685 6e1265316a8cd044a43b530ff391c55f 577 Pfam PF00750 tRNA synthetases class I (R) 98 447 2.5E-161 T 11-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 AL543_19685 6e1265316a8cd044a43b530ff391c55f 577 SUPERFAMILY SSF52374 111 454 1.21E-96 T 11-10-2018 AL543_19685 6e1265316a8cd044a43b530ff391c55f 577 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 3.1E-19 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AL543_19685 6e1265316a8cd044a43b530ff391c55f 577 SMART SM01016 5 87 1.4E-27 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AL543_19685 6e1265316a8cd044a43b530ff391c55f 577 SUPERFAMILY SSF47323 455 577 7.85E-36 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL543_19685 6e1265316a8cd044a43b530ff391c55f 577 SUPERFAMILY SSF55190 2 99 5.1E-21 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AL543_19685 6e1265316a8cd044a43b530ff391c55f 577 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 577 28.147 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AL543_19685 6e1265316a8cd044a43b530ff391c55f 577 SMART SM00836 461 577 1.7E-40 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AL543_19685 6e1265316a8cd044a43b530ff391c55f 577 Pfam PF05746 DALR anticodon binding domain 461 577 6.2E-36 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AL543_19685 6e1265316a8cd044a43b530ff391c55f 577 Gene3D G3DSA:1.10.730.10 455 577 8.4E-35 T 11-10-2018 AL543_19685 6e1265316a8cd044a43b530ff391c55f 577 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 577 6.9E-198 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AL543_19685 6e1265316a8cd044a43b530ff391c55f 577 Gene3D G3DSA:3.30.1360.70 1 106 1.1E-32 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AL543_19685 6e1265316a8cd044a43b530ff391c55f 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 3.6E-25 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AL543_19685 6e1265316a8cd044a43b530ff391c55f 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 3.6E-25 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AL543_19685 6e1265316a8cd044a43b530ff391c55f 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 3.6E-25 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AL543_19685 6e1265316a8cd044a43b530ff391c55f 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 304 325 3.6E-25 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AL543_01170 ce531d5b04bf88a083dfd7b08c85c67a 563 SMART SM00331 165 380 8.1E-10 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AL543_01170 ce531d5b04bf88a083dfd7b08c85c67a 563 Pfam PF00072 Response regulator receiver domain 3 115 1.8E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_01170 ce531d5b04bf88a083dfd7b08c85c67a 563 SUPERFAMILY SSF52172 2 161 3.42E-32 T 11-10-2018 IPR011006 CheY-like superfamily AL543_01170 ce531d5b04bf88a083dfd7b08c85c67a 563 Gene3D G3DSA:3.40.50.12740 1 161 1.0E-34 T 11-10-2018 AL543_01170 ce531d5b04bf88a083dfd7b08c85c67a 563 Gene3D G3DSA:3.30.565.10 402 560 1.3E-8 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_01170 ce531d5b04bf88a083dfd7b08c85c67a 563 SUPERFAMILY SSF81606 179 378 9.15E-6 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AL543_01170 ce531d5b04bf88a083dfd7b08c85c67a 563 Pfam PF13581 Histidine kinase-like ATPase domain 434 552 5.0E-8 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_01170 ce531d5b04bf88a083dfd7b08c85c67a 563 SMART SM00448 1 115 2.7E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_01170 ce531d5b04bf88a083dfd7b08c85c67a 563 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 192 380 1.7E-35 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AL543_01170 ce531d5b04bf88a083dfd7b08c85c67a 563 Gene3D G3DSA:3.60.40.10 162 393 4.6E-38 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AL543_00805 154bc019a8180f5d0fbdc4dc12fda695 959 Gene3D G3DSA:3.30.70.2740 398 481 3.3E-8 T 11-10-2018 AL543_00805 154bc019a8180f5d0fbdc4dc12fda695 959 SUPERFAMILY SSF55103 275 525 1.8E-56 T 11-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AL543_00805 154bc019a8180f5d0fbdc4dc12fda695 959 SUPERFAMILY SSF56176 11 268 2.54E-56 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AL543_00805 154bc019a8180f5d0fbdc4dc12fda695 959 Pfam PF02913 FAD linked oxidases, C-terminal domain 272 520 3.4E-63 T 11-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 AL543_00805 154bc019a8180f5d0fbdc4dc12fda695 959 SUPERFAMILY SSF46548 499 628 2.09E-21 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL543_00805 154bc019a8180f5d0fbdc4dc12fda695 959 Gene3D G3DSA:1.10.1060.10 523 633 2.2E-7 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL543_00805 154bc019a8180f5d0fbdc4dc12fda695 959 Pfam PF01565 FAD binding domain 47 183 8.5E-29 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AL543_00805 154bc019a8180f5d0fbdc4dc12fda695 959 Gene3D G3DSA:1.10.45.10 483 522 3.8E-5 T 11-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AL543_00805 154bc019a8180f5d0fbdc4dc12fda695 959 Pfam PF13183 4Fe-4S dicluster domain 544 616 3.5E-10 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL543_00805 154bc019a8180f5d0fbdc4dc12fda695 959 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 546 557 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL543_00805 154bc019a8180f5d0fbdc4dc12fda695 959 Pfam PF02754 Cysteine-rich domain 714 785 0.0032 T 11-10-2018 IPR004017 Cysteine-rich domain AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1614 1629 - T 11-10-2018 IPR006162 Phosphopantetheine attachment site AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 SUPERFAMILY SSF52777 2890 3130 2.89E-25 T 11-10-2018 AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 SUPERFAMILY SSF47336 3670 3742 6.15E-16 T 11-10-2018 IPR036736 ACP-like superfamily AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 Pfam PF00550 Phosphopantetheine attachment site 1593 1655 7.6E-10 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 Pfam PF00550 Phosphopantetheine attachment site 3678 3741 3.4E-11 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 Pfam PF00550 Phosphopantetheine attachment site 2537 2599 2.3E-9 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 Pfam PF00550 Phosphopantetheine attachment site 2621 2683 1.8E-8 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 Gene3D G3DSA:3.40.50.1820 3754 4026 1.1E-53 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 SUPERFAMILY SSF51735 1325 1533 1.12E-30 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1326 1503 1.7E-21 T 11-10-2018 AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 SMART SM00823 Phosphopantetheine attachment site 3676 3745 8.5E-8 T 11-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 SMART SM00823 Phosphopantetheine attachment site 1587 1659 0.04 T 11-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 SMART SM00823 Phosphopantetheine attachment site 2535 2603 0.81 T 11-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2558 2573 - T 11-10-2018 IPR006162 Phosphopantetheine attachment site AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 SUPERFAMILY SSF47336 1580 1694 3.93E-14 T 11-10-2018 IPR036736 ACP-like superfamily AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 Pfam PF00501 AMP-binding enzyme 3172 3560 9.9E-85 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 SUPERFAMILY SSF47336 2613 2684 3.8E-9 T 11-10-2018 IPR036736 ACP-like superfamily AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 Gene3D G3DSA:3.30.559.10 1677 1858 3.2E-55 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 Gene3D G3DSA:3.30.559.10 2706 2885 6.3E-36 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 SUPERFAMILY SSF52151 534 829 5.49E-59 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 Pfam PF13193 AMP-binding enzyme C-terminal domain 3569 3650 8.2E-9 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 Pfam PF00975 Thioesterase domain 3765 4018 4.3E-32 T 11-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 Pfam PF08659 KR domain 1326 1501 1.3E-37 T 11-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 ProSitePatterns PS00455 Putative AMP-binding domain signature. 3303 3314 - T 11-10-2018 IPR020845 AMP-binding, conserved site AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 Pfam PF00698 Acyl transferase domain 536 817 8.7E-53 T 11-10-2018 IPR014043 Acyl transferase AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 Pfam PF08242 Methyltransferase domain 2322 2422 3.2E-7 T 11-10-2018 IPR013217 Methyltransferase type 12 AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 12 261 4.9E-67 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 Gene3D G3DSA:3.40.50.720 1129 1561 2.6E-66 T 11-10-2018 AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 SMART SM00825 Beta-ketoacyl synthase 14 437 1.9E-166 T 11-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 Gene3D G3DSA:1.10.1200.10 2608 2691 4.4E-10 T 11-10-2018 IPR036736 ACP-like superfamily AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 Gene3D G3DSA:1.10.1200.10 2519 2606 1.3E-11 T 11-10-2018 IPR036736 ACP-like superfamily AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 SUPERFAMILY SSF53335 2315 2492 2.79E-18 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 Gene3D G3DSA:1.10.1200.10 1584 1676 6.9E-10 T 11-10-2018 IPR036736 ACP-like superfamily AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 538 833 1.1E-64 T 11-10-2018 IPR020801 Polyketide synthase, acyl transferase domain AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 SUPERFAMILY SSF53474 3744 4020 9.51E-54 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 3189 3579 6.0E-120 T 11-10-2018 IPR010071 Amino acid adenylation domain AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 Gene3D G3DSA:3.30.70.3290 453 879 3.0E-108 T 11-10-2018 AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 SUPERFAMILY SSF47336 2532 2600 1.57E-10 T 11-10-2018 IPR036736 ACP-like superfamily AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 SUPERFAMILY SSF53901 9 434 4.52E-78 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 Gene3D G3DSA:3.40.50.12780 3154 3555 3.6E-112 T 11-10-2018 AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 269 386 1.4E-37 T 11-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 SUPERFAMILY SSF52777 2709 2883 4.0E-17 T 11-10-2018 AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 Gene3D G3DSA:3.40.50.150 2190 2480 1.9E-40 T 11-10-2018 AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3700 3715 - T 11-10-2018 IPR006162 Phosphopantetheine attachment site AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 Gene3D G3DSA:3.40.366.10 536 836 3.0E-108 T 11-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 389 498 1.9E-14 T 11-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 SUPERFAMILY SSF52777 1675 1851 2.33E-26 T 11-10-2018 AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 Gene3D G3DSA:3.40.47.10 8 436 8.8E-150 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 Gene3D G3DSA:1.10.1200.10 3669 3750 3.7E-20 T 11-10-2018 IPR036736 ACP-like superfamily AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 Gene3D G3DSA:3.30.300.30 3556 3668 5.3E-29 T 11-10-2018 AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 Pfam PF00668 Condensation domain 1683 2123 3.1E-33 T 11-10-2018 IPR001242 Condensation domain AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 Pfam PF00668 Condensation domain 2709 3044 3.7E-22 T 11-10-2018 IPR001242 Condensation domain AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 SUPERFAMILY SSF52777 1862 2122 7.11E-38 T 11-10-2018 AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2642 2657 - T 11-10-2018 IPR006162 Phosphopantetheine attachment site AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 SUPERFAMILY SSF56801 3159 3689 1.44E-136 T 11-10-2018 AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 Gene3D G3DSA:3.30.559.30 2889 3131 4.6E-53 T 11-10-2018 AL543_04315 339dfcb9f7d604b9620cb3a34c7972bc 4041 Gene3D G3DSA:3.30.559.30 1861 2129 9.6E-75 T 11-10-2018 AL543_03565 aa3c1b2cdbd8b1197d2e86ce574fcdfe 404 SUPERFAMILY SSF51161 295 395 3.83E-17 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AL543_03565 aa3c1b2cdbd8b1197d2e86ce574fcdfe 404 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 404 51.078 T 11-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AL543_03565 aa3c1b2cdbd8b1197d2e86ce574fcdfe 404 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 194 204 - T 11-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AL543_03565 aa3c1b2cdbd8b1197d2e86ce574fcdfe 404 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 4 378 1.2E-154 T 11-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AL543_03565 aa3c1b2cdbd8b1197d2e86ce574fcdfe 404 Pfam PF00483 Nucleotidyl transferase 6 273 1.7E-69 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AL543_03565 aa3c1b2cdbd8b1197d2e86ce574fcdfe 404 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 11-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AL543_03565 aa3c1b2cdbd8b1197d2e86ce574fcdfe 404 SUPERFAMILY SSF53448 3 358 9.62E-79 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL543_03565 aa3c1b2cdbd8b1197d2e86ce574fcdfe 404 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 96 104 - T 11-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AL543_03565 aa3c1b2cdbd8b1197d2e86ce574fcdfe 404 Gene3D G3DSA:3.90.550.10 1 281 1.4E-92 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL543_03565 aa3c1b2cdbd8b1197d2e86ce574fcdfe 404 Gene3D G3DSA:2.160.10.10 282 403 3.7E-32 T 11-10-2018 AL543_01820 c75870352fa69c9789fa56a42e7250d6 434 Gene3D G3DSA:3.40.50.300 16 224 1.4E-65 T 11-10-2018 AL543_01820 c75870352fa69c9789fa56a42e7250d6 434 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 167 175 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AL543_01820 c75870352fa69c9789fa56a42e7250d6 434 Gene3D G3DSA:3.40.50.300 227 416 7.7E-45 T 11-10-2018 AL543_01820 c75870352fa69c9789fa56a42e7250d6 434 SUPERFAMILY SSF52540 52 365 1.21E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_01820 c75870352fa69c9789fa56a42e7250d6 434 Pfam PF00270 DEAD/DEAH box helicase 46 208 6.2E-45 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL543_01820 c75870352fa69c9789fa56a42e7250d6 434 Pfam PF00271 Helicase conserved C-terminal domain 245 353 1.2E-25 T 11-10-2018 IPR001650 Helicase, C-terminal AL543_01820 c75870352fa69c9789fa56a42e7250d6 434 SMART SM00487 41 232 4.2E-48 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL543_01820 c75870352fa69c9789fa56a42e7250d6 434 SMART SM00490 272 353 2.6E-29 T 11-10-2018 IPR001650 Helicase, C-terminal AL543_17035 ad06a2bcaab093e5f0db42c0b5766edc 398 SUPERFAMILY SSF50331 256 375 1.22E-20 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AL543_17035 ad06a2bcaab093e5f0db42c0b5766edc 398 Gene3D G3DSA:3.40.50.300 22 241 1.5E-65 T 11-10-2018 AL543_17035 ad06a2bcaab093e5f0db42c0b5766edc 398 SUPERFAMILY SSF52540 22 262 3.46E-84 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_17035 ad06a2bcaab093e5f0db42c0b5766edc 398 Gene3D G3DSA:2.40.50.940 242 368 6.8E-28 T 11-10-2018 AL543_17035 ad06a2bcaab093e5f0db42c0b5766edc 398 SMART SM00382 48 231 8.5E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_17035 ad06a2bcaab093e5f0db42c0b5766edc 398 Pfam PF00005 ABC transporter 40 181 6.2E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_17035 ad06a2bcaab093e5f0db42c0b5766edc 398 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_17035 ad06a2bcaab093e5f0db42c0b5766edc 398 Gene3D G3DSA:2.40.50.140 300 359 6.8E-28 T 11-10-2018 AL543_10945 90d54fe65e85a3605296f18edcd82c03 149 Gene3D G3DSA:3.10.430.100 61 149 9.1E-31 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily AL543_10945 90d54fe65e85a3605296f18edcd82c03 149 SUPERFAMILY SSF55658 1 57 3.14E-19 T 11-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal AL543_10945 90d54fe65e85a3605296f18edcd82c03 149 SUPERFAMILY SSF55653 60 149 6.41E-26 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily AL543_10945 90d54fe65e85a3605296f18edcd82c03 149 Gene3D G3DSA:3.40.5.10 1 50 7.0E-24 T 11-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_10945 90d54fe65e85a3605296f18edcd82c03 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 1.0E-55 T 11-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_10945 90d54fe65e85a3605296f18edcd82c03 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 6.9E-22 T 11-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_10945 90d54fe65e85a3605296f18edcd82c03 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 148 2.2E-25 T 11-10-2018 IPR020069 Ribosomal protein L9, C-terminal AL543_10945 90d54fe65e85a3605296f18edcd82c03 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 11-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_10945 90d54fe65e85a3605296f18edcd82c03 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 26.301 T 11-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_21175 4a502f81655eb31c46a021c8b1101505 36 Pfam PF11665 Protein of unknown function (DUF3265) 10 36 9.5E-8 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL543_20770 4a502f81655eb31c46a021c8b1101505 36 Pfam PF11665 Protein of unknown function (DUF3265) 10 36 9.5E-8 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL543_21280 4a502f81655eb31c46a021c8b1101505 36 Pfam PF11665 Protein of unknown function (DUF3265) 10 36 9.5E-8 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL543_08790 71486ff6c53b0b1f1a28f81e59e198de 286 SUPERFAMILY SSF88659 198 283 2.24E-19 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AL543_08790 71486ff6c53b0b1f1a28f81e59e198de 286 PRINTS PR00046 Major sigma-70 factor signature 268 279 7.9E-19 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL543_08790 71486ff6c53b0b1f1a28f81e59e198de 286 PRINTS PR00046 Major sigma-70 factor signature 253 268 7.9E-19 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL543_08790 71486ff6c53b0b1f1a28f81e59e198de 286 PRINTS PR00046 Major sigma-70 factor signature 233 245 7.9E-19 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL543_08790 71486ff6c53b0b1f1a28f81e59e198de 286 PRINTS PR00046 Major sigma-70 factor signature 77 90 7.9E-19 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL543_08790 71486ff6c53b0b1f1a28f81e59e198de 286 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL543_08790 71486ff6c53b0b1f1a28f81e59e198de 286 Pfam PF00140 Sigma-70 factor, region 1.2 14 40 8.4E-8 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL543_08790 71486ff6c53b0b1f1a28f81e59e198de 286 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 285 53.917 T 11-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL543_08790 71486ff6c53b0b1f1a28f81e59e198de 286 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 15 283 1.4E-126 T 11-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL543_08790 71486ff6c53b0b1f1a28f81e59e198de 286 Pfam PF04542 Sigma-70 region 2 53 122 1.2E-16 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AL543_08790 71486ff6c53b0b1f1a28f81e59e198de 286 Gene3D G3DSA:1.10.10.10 214 284 6.0E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_08790 71486ff6c53b0b1f1a28f81e59e198de 286 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 253 279 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL543_08790 71486ff6c53b0b1f1a28f81e59e198de 286 Gene3D G3DSA:1.20.120.1810 8 122 3.4E-27 T 11-10-2018 AL543_08790 71486ff6c53b0b1f1a28f81e59e198de 286 Pfam PF04545 Sigma-70, region 4 229 281 7.1E-16 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 AL543_08790 71486ff6c53b0b1f1a28f81e59e198de 286 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 282 2.6E-34 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AL543_08790 71486ff6c53b0b1f1a28f81e59e198de 286 SUPERFAMILY SSF88946 11 122 6.02E-40 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AL543_09515 1f456dafcad075e28442e991bdeb5f7a 631 Gene3D G3DSA:1.10.10.1800 459 550 1.7E-30 T 11-10-2018 AL543_09515 1f456dafcad075e28442e991bdeb5f7a 631 SMART SM01228 546 617 1.1E-41 T 11-10-2018 AL543_09515 1f456dafcad075e28442e991bdeb5f7a 631 Gene3D G3DSA:3.50.50.60 1 232 5.6E-91 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_09515 1f456dafcad075e28442e991bdeb5f7a 631 Gene3D G3DSA:3.50.50.60 296 458 2.8E-55 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_09515 1f456dafcad075e28442e991bdeb5f7a 631 Pfam PF01134 Glucose inhibited division protein A 8 399 2.9E-170 T 11-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 AL543_09515 1f456dafcad075e28442e991bdeb5f7a 631 SUPERFAMILY SSF51905 6 261 3.4E-51 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_09515 1f456dafcad075e28442e991bdeb5f7a 631 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 1.1E-292 T 11-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 AL543_09515 1f456dafcad075e28442e991bdeb5f7a 631 Pfam PF13932 GidA associated domain 403 616 8.0E-76 T 11-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 AL543_09515 1f456dafcad075e28442e991bdeb5f7a 631 Gene3D G3DSA:1.10.150.570 569 622 2.3E-22 T 11-10-2018 AL543_09515 1f456dafcad075e28442e991bdeb5f7a 631 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.475 T 11-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 AL543_09515 1f456dafcad075e28442e991bdeb5f7a 631 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 AL543_09515 1f456dafcad075e28442e991bdeb5f7a 631 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 AL543_04850 024e3764297e026ed96860f65313d405 133 Gene3D G3DSA:1.20.120.1870 5 132 2.5E-28 T 11-10-2018 AL543_04850 024e3764297e026ed96860f65313d405 133 PIRSF PIRSF018297 2 130 1.2E-38 T 11-10-2018 IPR006440 Death on curing protein GO:0016301 AL543_04850 024e3764297e026ed96860f65313d405 133 TIGRFAM TIGR01550 DOC_P1: death-on-curing family protein 9 106 2.1E-15 T 11-10-2018 IPR006440 Death on curing protein GO:0016301 AL543_05385 024e3764297e026ed96860f65313d405 133 Gene3D G3DSA:1.20.120.1870 5 132 2.5E-28 T 11-10-2018 AL543_05385 024e3764297e026ed96860f65313d405 133 PIRSF PIRSF018297 2 130 1.2E-38 T 11-10-2018 IPR006440 Death on curing protein GO:0016301 AL543_05385 024e3764297e026ed96860f65313d405 133 TIGRFAM TIGR01550 DOC_P1: death-on-curing family protein 9 106 2.1E-15 T 11-10-2018 IPR006440 Death on curing protein GO:0016301 AL543_05240 024e3764297e026ed96860f65313d405 133 Gene3D G3DSA:1.20.120.1870 5 132 2.5E-28 T 11-10-2018 AL543_05240 024e3764297e026ed96860f65313d405 133 PIRSF PIRSF018297 2 130 1.2E-38 T 11-10-2018 IPR006440 Death on curing protein GO:0016301 AL543_05240 024e3764297e026ed96860f65313d405 133 TIGRFAM TIGR01550 DOC_P1: death-on-curing family protein 9 106 2.1E-15 T 11-10-2018 IPR006440 Death on curing protein GO:0016301 AL543_17420 4d3d0c515989a4b86d83741c3e08626b 478 SUPERFAMILY SSF51735 1 295 2.45E-38 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_17420 4d3d0c515989a4b86d83741c3e08626b 478 Gene3D G3DSA:3.40.50.720 2 258 8.2E-31 T 11-10-2018 AL543_17420 4d3d0c515989a4b86d83741c3e08626b 478 Pfam PF11066 Protein of unknown function (DUF2867) 335 467 7.1E-13 T 11-10-2018 IPR021295 Protein of unknown function DUF2867 AL543_17420 4d3d0c515989a4b86d83741c3e08626b 478 Pfam PF13460 NAD(P)H-binding 8 151 4.0E-11 T 11-10-2018 IPR016040 NAD(P)-binding domain AL543_13850 3d7c1d36c1b7d5ac325af4558ef203ef 416 SUPERFAMILY SSF53383 6 415 1.36E-184 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL543_13850 3d7c1d36c1b7d5ac325af4558ef203ef 416 Gene3D G3DSA:3.40.640.10 37 288 8.8E-188 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL543_13850 3d7c1d36c1b7d5ac325af4558ef203ef 416 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 416 52.487 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AL543_13850 3d7c1d36c1b7d5ac325af4558ef203ef 416 PIRSF PIRSF000412 1 415 1.8E-169 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AL543_13850 3d7c1d36c1b7d5ac325af4558ef203ef 416 Gene3D G3DSA:3.90.1150.10 10 394 8.8E-188 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL543_13850 3d7c1d36c1b7d5ac325af4558ef203ef 416 Pfam PF00464 Serine hydroxymethyltransferase 8 385 1.5E-183 T 11-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AL543_13850 3d7c1d36c1b7d5ac325af4558ef203ef 416 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 11-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AL543_01465 bb41a27e33c6e7377fd4a2f4cfd0f96e 405 SUPERFAMILY SSF118215 15 397 6.02E-97 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AL543_01465 bb41a27e33c6e7377fd4a2f4cfd0f96e 405 Gene3D G3DSA:1.10.3860.10 3 404 5.0E-71 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AL543_01465 bb41a27e33c6e7377fd4a2f4cfd0f96e 405 Pfam PF00375 Sodium:dicarboxylate symporter family 15 397 5.7E-66 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL543_01465 bb41a27e33c6e7377fd4a2f4cfd0f96e 405 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 3 404 36.679 T 11-10-2018 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 AL543_01465 bb41a27e33c6e7377fd4a2f4cfd0f96e 405 PRINTS PR00173 Glutamate-aspartate symporter signature 322 341 1.4E-11 T 11-10-2018 AL543_01465 bb41a27e33c6e7377fd4a2f4cfd0f96e 405 PRINTS PR00173 Glutamate-aspartate symporter signature 185 204 1.4E-11 T 11-10-2018 AL543_01465 bb41a27e33c6e7377fd4a2f4cfd0f96e 405 PRINTS PR00173 Glutamate-aspartate symporter signature 220 239 1.4E-11 T 11-10-2018 AL543_01465 bb41a27e33c6e7377fd4a2f4cfd0f96e 405 PRINTS PR00173 Glutamate-aspartate symporter signature 287 313 1.4E-11 T 11-10-2018 AL543_01465 bb41a27e33c6e7377fd4a2f4cfd0f96e 405 PRINTS PR00173 Glutamate-aspartate symporter signature 13 33 1.4E-11 T 11-10-2018 AL543_13645 4389b00c0bf830d65dfbdd69a2939463 269 Gene3D G3DSA:3.40.190.10 115 219 1.2E-93 T 11-10-2018 AL543_13645 4389b00c0bf830d65dfbdd69a2939463 269 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 15 269 1.4E-125 T 11-10-2018 IPR004872 Lipoprotein NlpA family AL543_13645 4389b00c0bf830d65dfbdd69a2939463 269 PIRSF PIRSF002854 1 269 2.0E-99 T 11-10-2018 IPR004872 Lipoprotein NlpA family AL543_13645 4389b00c0bf830d65dfbdd69a2939463 269 Pfam PF03180 NLPA lipoprotein 33 269 7.6E-98 T 11-10-2018 IPR004872 Lipoprotein NlpA family AL543_13645 4389b00c0bf830d65dfbdd69a2939463 269 SUPERFAMILY SSF53850 32 269 3.32E-79 T 11-10-2018 AL543_13645 4389b00c0bf830d65dfbdd69a2939463 269 Gene3D G3DSA:3.40.190.10 34 263 1.2E-93 T 11-10-2018 AL543_10635 bebddd1f626a4887e33494af711bd393 357 Gene3D G3DSA:3.90.78.10 232 357 1.6E-47 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AL543_10635 bebddd1f626a4887e33494af711bd393 357 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 357 84.589 T 11-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AL543_10635 bebddd1f626a4887e33494af711bd393 357 Gene3D G3DSA:3.30.465.10 83 231 1.0E-54 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AL543_10635 bebddd1f626a4887e33494af711bd393 357 SUPERFAMILY SSF56194 215 352 5.36E-48 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AL543_10635 bebddd1f626a4887e33494af711bd393 357 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 219 340 4.8E-33 T 11-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AL543_10635 bebddd1f626a4887e33494af711bd393 357 SUPERFAMILY SSF56176 18 207 7.85E-43 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AL543_10635 bebddd1f626a4887e33494af711bd393 357 Gene3D G3DSA:3.30.43.10 1 81 5.6E-24 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 AL543_10635 bebddd1f626a4887e33494af711bd393 357 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 19 342 4.9E-95 T 11-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AL543_10635 bebddd1f626a4887e33494af711bd393 357 Pfam PF01565 FAD binding domain 34 163 2.8E-19 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AL543_05685 deea69ec60f675995bc9cf8d15012093 239 SMART SM01057 23 239 3.1E-95 T 11-10-2018 IPR001148 Alpha carbonic anhydrase domain AL543_05685 deea69ec60f675995bc9cf8d15012093 239 Pfam PF00194 Eukaryotic-type carbonic anhydrase 22 236 8.9E-49 T 11-10-2018 IPR001148 Alpha carbonic anhydrase domain AL543_05685 deea69ec60f675995bc9cf8d15012093 239 ProSitePatterns PS00162 Alpha-carbonic anhydrases signature. 109 125 - T 11-10-2018 IPR018338 Carbonic anhydrase, alpha-class, conserved site GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117|Reactome: R-HSA-1475029 AL543_05685 deea69ec60f675995bc9cf8d15012093 239 Gene3D G3DSA:3.10.200.10 22 237 6.1E-79 T 11-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily AL543_05685 deea69ec60f675995bc9cf8d15012093 239 SUPERFAMILY SSF51069 22 235 2.62E-72 T 11-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily AL543_18020 60b6be69b4719d0255e5a3582e13df41 1009 Gene3D G3DSA:3.30.70.1440 656 855 1.5E-242 T 11-10-2018 AL543_18020 60b6be69b4719d0255e5a3582e13df41 1009 Gene3D G3DSA:3.30.2090.10 707 797 1.5E-242 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL543_18020 60b6be69b4719d0255e5a3582e13df41 1009 SUPERFAMILY SSF82714 708 788 1.96E-9 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL543_18020 60b6be69b4719d0255e5a3582e13df41 1009 Gene3D G3DSA:3.30.70.1430 40 805 1.5E-242 T 11-10-2018 AL543_18020 60b6be69b4719d0255e5a3582e13df41 1009 Gene3D G3DSA:1.20.1640.10 503 1005 1.5E-242 T 11-10-2018 AL543_18020 60b6be69b4719d0255e5a3582e13df41 1009 SUPERFAMILY SSF82693 41 137 7.85E-18 T 11-10-2018 AL543_18020 60b6be69b4719d0255e5a3582e13df41 1009 Pfam PF00873 AcrB/AcrD/AcrF family 4 1006 7.9E-160 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_18020 60b6be69b4719d0255e5a3582e13df41 1009 SUPERFAMILY SSF82693 138 324 7.32E-19 T 11-10-2018 AL543_18020 60b6be69b4719d0255e5a3582e13df41 1009 Gene3D G3DSA:3.30.70.1320 138 328 1.5E-242 T 11-10-2018 AL543_18020 60b6be69b4719d0255e5a3582e13df41 1009 Gene3D G3DSA:3.30.70.1430 557 655 1.5E-242 T 11-10-2018 AL543_18020 60b6be69b4719d0255e5a3582e13df41 1009 SUPERFAMILY SSF82714 187 269 3.01E-12 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL543_18020 60b6be69b4719d0255e5a3582e13df41 1009 SUPERFAMILY SSF82866 793 1006 2.35E-43 T 11-10-2018 AL543_18020 60b6be69b4719d0255e5a3582e13df41 1009 Gene3D G3DSA:1.20.1640.10 12 502 1.5E-242 T 11-10-2018 AL543_18020 60b6be69b4719d0255e5a3582e13df41 1009 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 3.4E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_18020 60b6be69b4719d0255e5a3582e13df41 1009 PRINTS PR00702 Acriflavin resistance protein family signature 388 412 3.4E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_18020 60b6be69b4719d0255e5a3582e13df41 1009 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 3.4E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_18020 60b6be69b4719d0255e5a3582e13df41 1009 PRINTS PR00702 Acriflavin resistance protein family signature 468 491 3.4E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_18020 60b6be69b4719d0255e5a3582e13df41 1009 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 3.4E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_18020 60b6be69b4719d0255e5a3582e13df41 1009 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 3.4E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_18020 60b6be69b4719d0255e5a3582e13df41 1009 SUPERFAMILY SSF82866 295 495 2.49E-31 T 11-10-2018 AL543_18020 60b6be69b4719d0255e5a3582e13df41 1009 SUPERFAMILY SSF82693 557 650 1.1E-5 T 11-10-2018 AL543_18020 60b6be69b4719d0255e5a3582e13df41 1009 Gene3D G3DSA:3.30.2090.10 182 275 1.5E-242 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL543_09880 f9f5363e7318b2d5bed14216d01b6f35 671 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 670 40.525 T 11-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 AL543_09880 f9f5363e7318b2d5bed14216d01b6f35 671 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 9.6E-78 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AL543_09880 f9f5363e7318b2d5bed14216d01b6f35 671 Gene3D G3DSA:3.40.50.300 4 266 3.8E-100 T 11-10-2018 AL543_09880 f9f5363e7318b2d5bed14216d01b6f35 671 Gene3D G3DSA:1.10.10.160 108 181 3.8E-100 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily AL543_09880 f9f5363e7318b2d5bed14216d01b6f35 671 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 669 0.0 T 11-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 AL543_09880 f9f5363e7318b2d5bed14216d01b6f35 671 Pfam PF13361 UvrD-like helicase C-terminal domain 271 615 7.5E-74 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AL543_09880 f9f5363e7318b2d5bed14216d01b6f35 671 Gene3D G3DSA:3.40.50.300 274 634 3.6E-123 T 11-10-2018 AL543_09880 f9f5363e7318b2d5bed14216d01b6f35 671 Gene3D G3DSA:1.10.486.10 377 546 3.6E-123 T 11-10-2018 AL543_09880 f9f5363e7318b2d5bed14216d01b6f35 671 SUPERFAMILY SSF52540 1 641 7.14E-163 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_14720 9431f0c6f93db9975508274b3f1d28ab 380 Pfam PF00072 Response regulator receiver domain 8 113 5.1E-9 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_14720 9431f0c6f93db9975508274b3f1d28ab 380 SUPERFAMILY SSF52172 6 125 2.56E-14 T 11-10-2018 IPR011006 CheY-like superfamily AL543_14720 9431f0c6f93db9975508274b3f1d28ab 380 SUPERFAMILY SSF109604 133 370 7.22E-36 T 11-10-2018 AL543_14720 9431f0c6f93db9975508274b3f1d28ab 380 Gene3D G3DSA:1.10.3210.10 131 378 6.6E-36 T 11-10-2018 AL543_14720 9431f0c6f93db9975508274b3f1d28ab 380 PIRSF PIRSF036883 1 380 3.2E-175 T 11-10-2018 IPR014626 Signal transduction response regulator with modified HD-GYP domain, putative AL543_14720 9431f0c6f93db9975508274b3f1d28ab 380 SMART SM00448 6 117 0.0017 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_14720 9431f0c6f93db9975508274b3f1d28ab 380 Pfam PF08668 HDOD domain 142 278 4.0E-26 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD AL543_14720 9431f0c6f93db9975508274b3f1d28ab 380 Gene3D G3DSA:3.40.50.2300 4 124 1.9E-13 T 11-10-2018 AL543_08780 56b436123768d40c9036226d0dd31436 213 SUPERFAMILY SSF46689 7 80 3.83E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_08780 56b436123768d40c9036226d0dd31436 213 ProSitePatterns PS01081 TetR-type HTH domain signature. 31 61 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AL543_08780 56b436123768d40c9036226d0dd31436 213 Gene3D G3DSA:1.10.10.60 5 55 3.5E-23 T 11-10-2018 AL543_08780 56b436123768d40c9036226d0dd31436 213 Gene3D G3DSA:1.10.357.10 56 212 2.9E-35 T 11-10-2018 AL543_08780 56b436123768d40c9036226d0dd31436 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 61 1.3E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL543_04255 2f803bd229cf0618ddf5fd909e83e2c7 893 Gene3D G3DSA:3.40.50.720 1 131 2.0E-32 T 11-10-2018 AL543_04255 2f803bd229cf0618ddf5fd909e83e2c7 893 SUPERFAMILY SSF56059 493 706 1.95E-28 T 11-10-2018 AL543_04255 2f803bd229cf0618ddf5fd909e83e2c7 893 Gene3D G3DSA:3.40.50.261 295 465 9.7E-54 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL543_04255 2f803bd229cf0618ddf5fd909e83e2c7 893 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 153 290 1.1E-50 T 11-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain AL543_04255 2f803bd229cf0618ddf5fd909e83e2c7 893 SUPERFAMILY SSF51735 2 141 5.69E-30 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_04255 2f803bd229cf0618ddf5fd909e83e2c7 893 Pfam PF00583 Acetyltransferase (GNAT) family 772 875 3.0E-8 T 11-10-2018 IPR000182 GNAT domain AL543_04255 2f803bd229cf0618ddf5fd909e83e2c7 893 Gene3D G3DSA:3.40.50.261 132 293 4.5E-51 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL543_04255 2f803bd229cf0618ddf5fd909e83e2c7 893 Pfam PF13549 ATP-grasp domain 488 706 5.1E-68 T 11-10-2018 AL543_04255 2f803bd229cf0618ddf5fd909e83e2c7 893 Gene3D G3DSA:3.40.630.30 729 893 7.1E-40 T 11-10-2018 AL543_04255 2f803bd229cf0618ddf5fd909e83e2c7 893 Gene3D G3DSA:3.30.1490.20 511 588 1.4E-55 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AL543_04255 2f803bd229cf0618ddf5fd909e83e2c7 893 SUPERFAMILY SSF55729 738 882 1.31E-20 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL543_04255 2f803bd229cf0618ddf5fd909e83e2c7 893 Pfam PF13380 CoA binding domain 11 136 9.3E-20 T 11-10-2018 IPR003781 CoA-binding GO:0048037 AL543_04255 2f803bd229cf0618ddf5fd909e83e2c7 893 SUPERFAMILY SSF52210 131 292 9.55E-38 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL543_04255 2f803bd229cf0618ddf5fd909e83e2c7 893 Gene3D G3DSA:3.30.470.20 492 703 1.4E-55 T 11-10-2018 AL543_04255 2f803bd229cf0618ddf5fd909e83e2c7 893 SUPERFAMILY SSF52210 297 457 3.01E-43 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL543_04255 2f803bd229cf0618ddf5fd909e83e2c7 893 SMART SM00881 7 102 3.8E-22 T 11-10-2018 IPR003781 CoA-binding GO:0048037 AL543_05785 ac616acb4f3409a604cb6b052c923ff0 210 Gene3D G3DSA:3.20.20.70 1 209 3.8E-76 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_05785 ac616acb4f3409a604cb6b052c923ff0 210 Pfam PF01081 KDPG and KHG aldolase 7 199 7.1E-73 T 11-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AL543_05785 ac616acb4f3409a604cb6b052c923ff0 210 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 7 206 5.4E-83 T 11-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AL543_05785 ac616acb4f3409a604cb6b052c923ff0 210 SUPERFAMILY SSF51569 3 207 6.41E-66 T 11-10-2018 AL543_05785 ac616acb4f3409a604cb6b052c923ff0 210 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 126 139 - T 11-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AL543_05785 ac616acb4f3409a604cb6b052c923ff0 210 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 38 47 - T 11-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AL543_11495 8ad3a2ee7166c509a245ee90adf91b7c 353 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 167 2.8E-20 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AL543_11495 8ad3a2ee7166c509a245ee90adf91b7c 353 SUPERFAMILY SSF55811 218 344 1.33E-26 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AL543_11495 8ad3a2ee7166c509a245ee90adf91b7c 353 Gene3D G3DSA:1.10.340.30 19 130 1.9E-87 T 11-10-2018 AL543_11495 8ad3a2ee7166c509a245ee90adf91b7c 353 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 4 266 1.9E-131 T 11-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 AL543_11495 8ad3a2ee7166c509a245ee90adf91b7c 353 SMART SM00525 189 209 1.8E-4 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 AL543_11495 8ad3a2ee7166c509a245ee90adf91b7c 353 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 190 206 - T 11-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AL543_11495 8ad3a2ee7166c509a245ee90adf91b7c 353 Gene3D G3DSA:1.10.1670.10 7 209 1.9E-87 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AL543_11495 8ad3a2ee7166c509a245ee90adf91b7c 353 ProSitePatterns PS01155 Endonuclease III family signature. 100 129 - T 11-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 AL543_11495 8ad3a2ee7166c509a245ee90adf91b7c 353 Gene3D G3DSA:3.90.79.10 224 346 3.2E-15 T 11-10-2018 AL543_11495 8ad3a2ee7166c509a245ee90adf91b7c 353 Pfam PF14815 NUDIX domain 231 343 1.2E-22 T 11-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AL543_11495 8ad3a2ee7166c509a245ee90adf91b7c 353 SUPERFAMILY SSF48150 3 223 3.93E-76 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AL543_11495 8ad3a2ee7166c509a245ee90adf91b7c 353 SMART SM00478 37 188 1.3E-47 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AL543_11495 8ad3a2ee7166c509a245ee90adf91b7c 353 Pfam PF00633 Helix-hairpin-helix motif 97 125 4.8E-6 T 11-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 AL543_08510 dd0c999f3a64ece3b62a9152991511b5 675 Pfam PF03958 Bacterial type II/III secretion system short domain 126 187 1.9E-8 T 11-10-2018 IPR005644 NolW-like AL543_08510 dd0c999f3a64ece3b62a9152991511b5 675 Pfam PF03958 Bacterial type II/III secretion system short domain 267 343 2.7E-16 T 11-10-2018 IPR005644 NolW-like AL543_08510 dd0c999f3a64ece3b62a9152991511b5 675 Pfam PF03958 Bacterial type II/III secretion system short domain 192 259 8.1E-16 T 11-10-2018 IPR005644 NolW-like AL543_08510 dd0c999f3a64ece3b62a9152991511b5 675 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 30 621 1.5E-158 T 11-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 AL543_08510 dd0c999f3a64ece3b62a9152991511b5 675 Gene3D G3DSA:3.30.1370.120 20 186 9.5E-54 T 11-10-2018 IPR038591 NolW-like superfamily AL543_08510 dd0c999f3a64ece3b62a9152991511b5 675 Gene3D G3DSA:3.30.1370.120 189 259 1.0E-21 T 11-10-2018 IPR038591 NolW-like superfamily AL543_08510 dd0c999f3a64ece3b62a9152991511b5 675 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 557 590 - T 11-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 AL543_08510 dd0c999f3a64ece3b62a9152991511b5 675 Pfam PF00263 Bacterial type II and III secretion system protein 450 612 1.2E-50 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 AL543_08510 dd0c999f3a64ece3b62a9152991511b5 675 PRINTS PR01032 Gene IV protein signature 592 614 1.2E-12 T 11-10-2018 AL543_08510 dd0c999f3a64ece3b62a9152991511b5 675 PRINTS PR01032 Gene IV protein signature 471 494 1.2E-12 T 11-10-2018 AL543_08510 dd0c999f3a64ece3b62a9152991511b5 675 PRINTS PR01032 Gene IV protein signature 539 567 1.2E-12 T 11-10-2018 AL543_08510 dd0c999f3a64ece3b62a9152991511b5 675 Gene3D G3DSA:3.30.1370.120 260 344 8.2E-16 T 11-10-2018 IPR038591 NolW-like superfamily AL543_08510 dd0c999f3a64ece3b62a9152991511b5 675 PRINTS PR00811 Bacterial general secretion pathway protein D signature 599 613 4.4E-38 T 11-10-2018 IPR001775 GspD/PilQ family AL543_08510 dd0c999f3a64ece3b62a9152991511b5 675 PRINTS PR00811 Bacterial general secretion pathway protein D signature 481 491 4.4E-38 T 11-10-2018 IPR001775 GspD/PilQ family AL543_08510 dd0c999f3a64ece3b62a9152991511b5 675 PRINTS PR00811 Bacterial general secretion pathway protein D signature 343 353 4.4E-38 T 11-10-2018 IPR001775 GspD/PilQ family AL543_08510 dd0c999f3a64ece3b62a9152991511b5 675 PRINTS PR00811 Bacterial general secretion pathway protein D signature 446 470 4.4E-38 T 11-10-2018 IPR001775 GspD/PilQ family AL543_08510 dd0c999f3a64ece3b62a9152991511b5 675 PRINTS PR00811 Bacterial general secretion pathway protein D signature 576 594 4.4E-38 T 11-10-2018 IPR001775 GspD/PilQ family AL543_16320 f19060195cdec0203b7d253879150389 467 Pfam PF07690 Major Facilitator Superfamily 21 400 2.6E-47 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL543_16320 f19060195cdec0203b7d253879150389 467 PRINTS PR01036 Tetracycline resistance protein TetB signature 109 129 1.3E-5 T 11-10-2018 AL543_16320 f19060195cdec0203b7d253879150389 467 PRINTS PR01036 Tetracycline resistance protein TetB signature 298 322 1.3E-5 T 11-10-2018 AL543_16320 f19060195cdec0203b7d253879150389 467 PRINTS PR01036 Tetracycline resistance protein TetB signature 139 163 1.3E-5 T 11-10-2018 AL543_16320 f19060195cdec0203b7d253879150389 467 SUPERFAMILY SSF103473 13 462 4.19E-60 T 11-10-2018 IPR036259 MFS transporter superfamily AL543_16320 f19060195cdec0203b7d253879150389 467 Gene3D G3DSA:1.20.1250.20 252 463 5.0E-20 T 11-10-2018 AL543_16320 f19060195cdec0203b7d253879150389 467 Gene3D G3DSA:1.20.1720.10 17 245 5.8E-47 T 11-10-2018 AL543_07955 fade29d5645c743b1e0fb3166003aed1 192 PRINTS PR00097 Anthranilate synthase component II signature 99 107 5.1E-36 T 11-10-2018 AL543_07955 fade29d5645c743b1e0fb3166003aed1 192 PRINTS PR00097 Anthranilate synthase component II signature 2 16 5.1E-36 T 11-10-2018 AL543_07955 fade29d5645c743b1e0fb3166003aed1 192 PRINTS PR00097 Anthranilate synthase component II signature 74 85 5.1E-36 T 11-10-2018 AL543_07955 fade29d5645c743b1e0fb3166003aed1 192 PRINTS PR00097 Anthranilate synthase component II signature 47 56 5.1E-36 T 11-10-2018 AL543_07955 fade29d5645c743b1e0fb3166003aed1 192 PRINTS PR00097 Anthranilate synthase component II signature 119 131 5.1E-36 T 11-10-2018 AL543_07955 fade29d5645c743b1e0fb3166003aed1 192 PRINTS PR00097 Anthranilate synthase component II signature 169 182 5.1E-36 T 11-10-2018 AL543_07955 fade29d5645c743b1e0fb3166003aed1 192 Pfam PF00117 Glutamine amidotransferase class-I 4 190 3.5E-56 T 11-10-2018 IPR017926 Glutamine amidotransferase AL543_07955 fade29d5645c743b1e0fb3166003aed1 192 SUPERFAMILY SSF52317 1 191 4.58E-55 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL543_07955 fade29d5645c743b1e0fb3166003aed1 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 4.2E-13 T 11-10-2018 AL543_07955 fade29d5645c743b1e0fb3166003aed1 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 4.2E-13 T 11-10-2018 AL543_07955 fade29d5645c743b1e0fb3166003aed1 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 4.2E-13 T 11-10-2018 AL543_07955 fade29d5645c743b1e0fb3166003aed1 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 1.1E-5 T 11-10-2018 AL543_07955 fade29d5645c743b1e0fb3166003aed1 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 1.1E-5 T 11-10-2018 AL543_07955 fade29d5645c743b1e0fb3166003aed1 192 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 192 5.9E-86 T 11-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL543_07955 fade29d5645c743b1e0fb3166003aed1 192 Gene3D G3DSA:3.40.50.880 1 192 1.9E-62 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL543_12265 e9153136d92f06d933153500fb32efef 395 Gene3D G3DSA:3.40.50.620 5 217 1.5E-75 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL543_12265 e9153136d92f06d933153500fb32efef 395 Pfam PF00579 tRNA synthetases class I (W and Y) 30 317 4.8E-80 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL543_12265 e9153136d92f06d933153500fb32efef 395 SUPERFAMILY SSF52374 6 315 3.67E-97 T 11-10-2018 AL543_12265 e9153136d92f06d933153500fb32efef 395 SMART SM00363 334 395 0.0025 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_12265 e9153136d92f06d933153500fb32efef 395 Gene3D G3DSA:3.10.290.10 327 394 4.2E-16 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AL543_12265 e9153136d92f06d933153500fb32efef 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 1.5E-25 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AL543_12265 e9153136d92f06d933153500fb32efef 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 1.5E-25 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AL543_12265 e9153136d92f06d933153500fb32efef 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 1.5E-25 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AL543_12265 e9153136d92f06d933153500fb32efef 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 1.5E-25 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AL543_12265 e9153136d92f06d933153500fb32efef 395 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL543_12265 e9153136d92f06d933153500fb32efef 395 SUPERFAMILY SSF55174 320 394 1.77E-15 T 11-10-2018 AL543_12265 e9153136d92f06d933153500fb32efef 395 Gene3D G3DSA:1.10.240.10 218 326 7.4E-33 T 11-10-2018 AL543_12265 e9153136d92f06d933153500fb32efef 395 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 4 395 2.3E-129 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AL543_12265 e9153136d92f06d933153500fb32efef 395 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 394 48.236 T 11-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 AL543_09045 3741973808b902416324d40521bcd78f 209 Pfam PF00717 Peptidase S24-like 121 187 8.3E-16 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AL543_09045 3741973808b902416324d40521bcd78f 209 SUPERFAMILY SSF46785 3 69 1.09E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_09045 3741973808b902416324d40521bcd78f 209 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 129 140 3.2E-12 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AL543_09045 3741973808b902416324d40521bcd78f 209 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 118 128 3.2E-12 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AL543_09045 3741973808b902416324d40521bcd78f 209 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 157 169 3.2E-12 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AL543_09045 3741973808b902416324d40521bcd78f 209 Gene3D G3DSA:2.10.109.10 87 209 4.1E-45 T 11-10-2018 AL543_09045 3741973808b902416324d40521bcd78f 209 Hamap MF_00015 LexA repressor [lexA]. 3 206 32.109 T 11-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 AL543_09045 3741973808b902416324d40521bcd78f 209 TIGRFAM TIGR00498 lexA: repressor LexA 1 206 3.1E-81 T 11-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 AL543_09045 3741973808b902416324d40521bcd78f 209 Pfam PF01726 LexA DNA binding domain 1 65 1.5E-29 T 11-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 AL543_09045 3741973808b902416324d40521bcd78f 209 SUPERFAMILY SSF51306 82 205 1.48E-36 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily AL543_09045 3741973808b902416324d40521bcd78f 209 Gene3D G3DSA:1.10.10.10 1 69 4.5E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_06890 52b118221b7e714a2569f4f49d2a51db 302 Gene3D G3DSA:1.10.443.10 114 296 1.3E-71 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AL543_06890 52b118221b7e714a2569f4f49d2a51db 302 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 8 302 61.472 T 11-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 AL543_06890 52b118221b7e714a2569f4f49d2a51db 302 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 13 302 2.8E-116 T 11-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 AL543_06890 52b118221b7e714a2569f4f49d2a51db 302 Pfam PF00589 Phage integrase family 116 288 3.2E-53 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL543_06890 52b118221b7e714a2569f4f49d2a51db 302 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 10 302 55.657 T 11-10-2018 IPR023009 Tyrosine recombinase XerC/XerD AL543_06890 52b118221b7e714a2569f4f49d2a51db 302 SUPERFAMILY SSF56349 11 294 8.54E-56 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL543_06890 52b118221b7e714a2569f4f49d2a51db 302 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 12 94 9.1E-19 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AL543_06890 52b118221b7e714a2569f4f49d2a51db 302 Gene3D G3DSA:1.10.150.130 8 102 3.6E-23 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AL543_08280 b18575c1664dae05030219b6244fcdd1 320 SUPERFAMILY SSF53784 3 315 6.28E-113 T 11-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AL543_08280 b18575c1664dae05030219b6244fcdd1 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 2.6E-83 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AL543_08280 b18575c1664dae05030219b6244fcdd1 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 139 157 2.6E-83 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AL543_08280 b18575c1664dae05030219b6244fcdd1 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 2.6E-83 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AL543_08280 b18575c1664dae05030219b6244fcdd1 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 213 225 2.6E-83 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AL543_08280 b18575c1664dae05030219b6244fcdd1 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 121 138 2.6E-83 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AL543_08280 b18575c1664dae05030219b6244fcdd1 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 240 262 2.6E-83 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AL543_08280 b18575c1664dae05030219b6244fcdd1 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 177 194 2.6E-83 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AL543_08280 b18575c1664dae05030219b6244fcdd1 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 159 175 2.6E-83 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AL543_08280 b18575c1664dae05030219b6244fcdd1 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 2.6E-83 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AL543_08280 b18575c1664dae05030219b6244fcdd1 320 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 2 320 47.381 T 11-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 AL543_08280 b18575c1664dae05030219b6244fcdd1 320 Pfam PF00365 Phosphofructokinase 4 276 4.2E-109 T 11-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AL543_08280 b18575c1664dae05030219b6244fcdd1 320 ProSitePatterns PS00433 Phosphofructokinase signature. 244 262 - T 11-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AL543_08280 b18575c1664dae05030219b6244fcdd1 320 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 301 3.2E-130 T 11-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 AL543_08280 b18575c1664dae05030219b6244fcdd1 320 PIRSF PIRSF000532 1 320 5.4E-129 T 11-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 AL543_08280 b18575c1664dae05030219b6244fcdd1 320 Gene3D G3DSA:3.40.50.450 4 287 4.5E-116 T 11-10-2018 AL543_08280 b18575c1664dae05030219b6244fcdd1 320 Gene3D G3DSA:3.40.50.460 143 252 4.5E-116 T 11-10-2018 AL543_06410 aa93f5ec6e01dd7a6011cb5dc07f066b 706 Gene3D G3DSA:1.10.10.1020 6 128 5.3E-24 T 11-10-2018 AL543_06410 aa93f5ec6e01dd7a6011cb5dc07f066b 706 Gene3D G3DSA:3.40.50.300 571 693 1.2E-26 T 11-10-2018 AL543_06410 aa93f5ec6e01dd7a6011cb5dc07f066b 706 Gene3D G3DSA:3.40.50.300 451 570 7.7E-27 T 11-10-2018 AL543_06410 aa93f5ec6e01dd7a6011cb5dc07f066b 706 Pfam PF13604 AAA domain 238 400 1.6E-30 T 11-10-2018 AL543_06410 aa93f5ec6e01dd7a6011cb5dc07f066b 706 Pfam PF13538 UvrD-like helicase C-terminal domain 633 678 1.7E-13 T 11-10-2018 IPR027785 UvrD-like helicase C-terminal domain AL543_06410 aa93f5ec6e01dd7a6011cb5dc07f066b 706 Gene3D G3DSA:3.40.50.300 209 441 7.4E-72 T 11-10-2018 AL543_06410 aa93f5ec6e01dd7a6011cb5dc07f066b 706 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 10 704 3.4E-254 T 11-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 AL543_06410 aa93f5ec6e01dd7a6011cb5dc07f066b 706 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 18 702 49.648 T 11-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 AL543_06410 aa93f5ec6e01dd7a6011cb5dc07f066b 706 SUPERFAMILY SSF52540 15 446 1.04E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_06410 aa93f5ec6e01dd7a6011cb5dc07f066b 706 SUPERFAMILY SSF52540 366 704 4.43E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_01440 93fa374ac52034eb3214b3a021ff7711 280 Gene3D G3DSA:3.40.800.10 40 276 7.5E-10 T 11-10-2018 AL543_01440 93fa374ac52034eb3214b3a021ff7711 280 Pfam PF00491 Arginase family 61 250 1.4E-6 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 AL543_01440 93fa374ac52034eb3214b3a021ff7711 280 SUPERFAMILY SSF52768 45 256 1.62E-21 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily AL543_14595 9a1e946ccde3b5536a8916fd90734fd2 333 PIRSF PIRSF000149 1 331 1.0E-116 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_14595 9a1e946ccde3b5536a8916fd90734fd2 333 SUPERFAMILY SSF55347 152 314 2.41E-64 T 11-10-2018 AL543_14595 9a1e946ccde3b5536a8916fd90734fd2 333 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 323 2.6E-118 T 11-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_14595 9a1e946ccde3b5536a8916fd90734fd2 333 SUPERFAMILY SSF51735 1 179 6.59E-53 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_14595 9a1e946ccde3b5536a8916fd90734fd2 333 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 100 9.6E-32 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_14595 9a1e946ccde3b5536a8916fd90734fd2 333 SMART SM00846 3 152 6.2E-71 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_14595 9a1e946ccde3b5536a8916fd90734fd2 333 Gene3D G3DSA:3.40.50.720 4 327 3.0E-127 T 11-10-2018 AL543_14595 9a1e946ccde3b5536a8916fd90734fd2 333 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 1.2E-59 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_14595 9a1e946ccde3b5536a8916fd90734fd2 333 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 11-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_14595 9a1e946ccde3b5536a8916fd90734fd2 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 1.4E-28 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_14595 9a1e946ccde3b5536a8916fd90734fd2 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 1.4E-28 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_14595 9a1e946ccde3b5536a8916fd90734fd2 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 1.4E-28 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_14595 9a1e946ccde3b5536a8916fd90734fd2 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 108 121 1.4E-28 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_14595 9a1e946ccde3b5536a8916fd90734fd2 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 1.4E-28 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_14595 9a1e946ccde3b5536a8916fd90734fd2 333 Gene3D G3DSA:3.30.360.10 151 315 3.0E-127 T 11-10-2018 AL543_18140 91f9fb4de78d76b1250dc153e75bd5e6 247 Pfam PF12833 Helix-turn-helix domain 169 243 4.8E-21 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL543_18140 91f9fb4de78d76b1250dc153e75bd5e6 247 SUPERFAMILY SSF46689 196 243 1.16E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_18140 91f9fb4de78d76b1250dc153e75bd5e6 247 SUPERFAMILY SSF46689 143 192 3.58E-6 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_18140 91f9fb4de78d76b1250dc153e75bd5e6 247 Gene3D G3DSA:1.10.10.60 192 245 1.4E-19 T 11-10-2018 AL543_18140 91f9fb4de78d76b1250dc153e75bd5e6 247 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 196 239 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL543_18140 91f9fb4de78d76b1250dc153e75bd5e6 247 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 212 227 3.6E-7 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL543_18140 91f9fb4de78d76b1250dc153e75bd5e6 247 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 227 243 3.6E-7 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL543_18140 91f9fb4de78d76b1250dc153e75bd5e6 247 Gene3D G3DSA:1.10.10.60 142 191 5.0E-10 T 11-10-2018 AL543_18140 91f9fb4de78d76b1250dc153e75bd5e6 247 SMART SM00342 159 243 1.6E-26 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL543_14965 60a22c7b755360ea4fb7289e548fc68c 298 SUPERFAMILY SSF54913 225 297 1.56E-20 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AL543_14965 60a22c7b755360ea4fb7289e548fc68c 298 Gene3D G3DSA:3.40.190.10 6 219 2.7E-68 T 11-10-2018 AL543_14965 60a22c7b755360ea4fb7289e548fc68c 298 Gene3D G3DSA:3.30.70.120 225 298 1.9E-33 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AL543_14965 60a22c7b755360ea4fb7289e548fc68c 298 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 5 298 35.277 T 11-10-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 AL543_14965 60a22c7b755360ea4fb7289e548fc68c 298 Pfam PF08029 HisG, C-terminal domain 222 295 7.0E-24 T 11-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AL543_14965 60a22c7b755360ea4fb7289e548fc68c 298 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 155 176 - T 11-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 AL543_14965 60a22c7b755360ea4fb7289e548fc68c 298 Pfam PF01634 ATP phosphoribosyltransferase 53 218 3.7E-45 T 11-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AL543_14965 60a22c7b755360ea4fb7289e548fc68c 298 SUPERFAMILY SSF53850 5 222 7.5E-66 T 11-10-2018 AL543_14965 60a22c7b755360ea4fb7289e548fc68c 298 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 6 196 9.4E-55 T 11-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AL543_14965 60a22c7b755360ea4fb7289e548fc68c 298 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 204 297 4.9E-29 T 11-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AL543_14965 60a22c7b755360ea4fb7289e548fc68c 298 Gene3D G3DSA:3.40.190.10 102 191 2.7E-68 T 11-10-2018 AL543_11675 b2752f1afdd91c56e82ec10604fbd1f0 610 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 610 1.9E-260 T 11-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 AL543_11675 b2752f1afdd91c56e82ec10604fbd1f0 610 Gene3D G3DSA:3.60.20.10 2 241 6.0E-80 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL543_11675 b2752f1afdd91c56e82ec10604fbd1f0 610 Gene3D G3DSA:3.40.50.10490 249 609 7.3E-146 T 11-10-2018 AL543_11675 b2752f1afdd91c56e82ec10604fbd1f0 610 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 610 40.425 T 11-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 AL543_11675 b2752f1afdd91c56e82ec10604fbd1f0 610 Pfam PF01380 SIS domain 290 419 1.2E-32 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL543_11675 b2752f1afdd91c56e82ec10604fbd1f0 610 Pfam PF01380 SIS domain 463 592 1.9E-25 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL543_11675 b2752f1afdd91c56e82ec10604fbd1f0 610 SUPERFAMILY SSF53697 245 610 2.69E-111 T 11-10-2018 AL543_11675 b2752f1afdd91c56e82ec10604fbd1f0 610 Pfam PF13522 Glutamine amidotransferase domain 58 174 3.9E-20 T 11-10-2018 AL543_11675 b2752f1afdd91c56e82ec10604fbd1f0 610 Gene3D G3DSA:3.40.50.10490 448 595 7.3E-146 T 11-10-2018 AL543_11675 b2752f1afdd91c56e82ec10604fbd1f0 610 SUPERFAMILY SSF56235 2 234 8.06E-76 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL543_16575 2751832f4c2c7d3c5b3bffbdb93bf2db 347 SUPERFAMILY SSF46689 16 131 6.57E-25 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_16575 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Pfam PF13358 DDE superfamily endonuclease 169 312 1.4E-34 T 11-10-2018 IPR038717 Tc1-like transposase, DDE domain AL543_16575 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Gene3D G3DSA:3.30.420.470 138 344 2.3E-12 T 11-10-2018 AL543_16575 2751832f4c2c7d3c5b3bffbdb93bf2db 347 SUPERFAMILY SSF53098 220 316 8.19E-8 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_16575 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Pfam PF13551 Winged helix-turn helix 32 87 1.8E-7 T 11-10-2018 AL543_16575 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Pfam PF13592 Winged helix-turn helix 98 155 7.3E-20 T 11-10-2018 IPR025959 Winged helix-turn helix domain AL543_04870 2751832f4c2c7d3c5b3bffbdb93bf2db 347 SUPERFAMILY SSF46689 16 131 6.57E-25 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_04870 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Pfam PF13358 DDE superfamily endonuclease 169 312 1.4E-34 T 11-10-2018 IPR038717 Tc1-like transposase, DDE domain AL543_04870 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Gene3D G3DSA:3.30.420.470 138 344 2.3E-12 T 11-10-2018 AL543_04870 2751832f4c2c7d3c5b3bffbdb93bf2db 347 SUPERFAMILY SSF53098 220 316 8.19E-8 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_04870 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Pfam PF13551 Winged helix-turn helix 32 87 1.8E-7 T 11-10-2018 AL543_04870 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Pfam PF13592 Winged helix-turn helix 98 155 7.3E-20 T 11-10-2018 IPR025959 Winged helix-turn helix domain AL543_05155 2751832f4c2c7d3c5b3bffbdb93bf2db 347 SUPERFAMILY SSF46689 16 131 6.57E-25 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_05155 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Pfam PF13358 DDE superfamily endonuclease 169 312 1.4E-34 T 11-10-2018 IPR038717 Tc1-like transposase, DDE domain AL543_05155 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Gene3D G3DSA:3.30.420.470 138 344 2.3E-12 T 11-10-2018 AL543_05155 2751832f4c2c7d3c5b3bffbdb93bf2db 347 SUPERFAMILY SSF53098 220 316 8.19E-8 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_05155 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Pfam PF13551 Winged helix-turn helix 32 87 1.8E-7 T 11-10-2018 AL543_05155 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Pfam PF13592 Winged helix-turn helix 98 155 7.3E-20 T 11-10-2018 IPR025959 Winged helix-turn helix domain AL543_03260 2751832f4c2c7d3c5b3bffbdb93bf2db 347 SUPERFAMILY SSF46689 16 131 6.57E-25 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_03260 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Pfam PF13358 DDE superfamily endonuclease 169 312 1.4E-34 T 11-10-2018 IPR038717 Tc1-like transposase, DDE domain AL543_03260 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Gene3D G3DSA:3.30.420.470 138 344 2.3E-12 T 11-10-2018 AL543_03260 2751832f4c2c7d3c5b3bffbdb93bf2db 347 SUPERFAMILY SSF53098 220 316 8.19E-8 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_03260 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Pfam PF13551 Winged helix-turn helix 32 87 1.8E-7 T 11-10-2018 AL543_03260 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Pfam PF13592 Winged helix-turn helix 98 155 7.3E-20 T 11-10-2018 IPR025959 Winged helix-turn helix domain AL543_13135 2751832f4c2c7d3c5b3bffbdb93bf2db 347 SUPERFAMILY SSF46689 16 131 6.57E-25 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_13135 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Pfam PF13358 DDE superfamily endonuclease 169 312 1.4E-34 T 11-10-2018 IPR038717 Tc1-like transposase, DDE domain AL543_13135 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Gene3D G3DSA:3.30.420.470 138 344 2.3E-12 T 11-10-2018 AL543_13135 2751832f4c2c7d3c5b3bffbdb93bf2db 347 SUPERFAMILY SSF53098 220 316 8.19E-8 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_13135 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Pfam PF13551 Winged helix-turn helix 32 87 1.8E-7 T 11-10-2018 AL543_13135 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Pfam PF13592 Winged helix-turn helix 98 155 7.3E-20 T 11-10-2018 IPR025959 Winged helix-turn helix domain AL543_17390 2751832f4c2c7d3c5b3bffbdb93bf2db 347 SUPERFAMILY SSF46689 16 131 6.57E-25 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_17390 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Pfam PF13358 DDE superfamily endonuclease 169 312 1.4E-34 T 11-10-2018 IPR038717 Tc1-like transposase, DDE domain AL543_17390 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Gene3D G3DSA:3.30.420.470 138 344 2.3E-12 T 11-10-2018 AL543_17390 2751832f4c2c7d3c5b3bffbdb93bf2db 347 SUPERFAMILY SSF53098 220 316 8.19E-8 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_17390 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Pfam PF13551 Winged helix-turn helix 32 87 1.8E-7 T 11-10-2018 AL543_17390 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Pfam PF13592 Winged helix-turn helix 98 155 7.3E-20 T 11-10-2018 IPR025959 Winged helix-turn helix domain AL543_14285 2751832f4c2c7d3c5b3bffbdb93bf2db 347 SUPERFAMILY SSF46689 16 131 6.57E-25 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_14285 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Pfam PF13358 DDE superfamily endonuclease 169 312 1.4E-34 T 11-10-2018 IPR038717 Tc1-like transposase, DDE domain AL543_14285 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Gene3D G3DSA:3.30.420.470 138 344 2.3E-12 T 11-10-2018 AL543_14285 2751832f4c2c7d3c5b3bffbdb93bf2db 347 SUPERFAMILY SSF53098 220 316 8.19E-8 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_14285 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Pfam PF13551 Winged helix-turn helix 32 87 1.8E-7 T 11-10-2018 AL543_14285 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Pfam PF13592 Winged helix-turn helix 98 155 7.3E-20 T 11-10-2018 IPR025959 Winged helix-turn helix domain AL543_11295 2751832f4c2c7d3c5b3bffbdb93bf2db 347 SUPERFAMILY SSF46689 16 131 6.57E-25 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_11295 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Pfam PF13358 DDE superfamily endonuclease 169 312 1.4E-34 T 11-10-2018 IPR038717 Tc1-like transposase, DDE domain AL543_11295 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Gene3D G3DSA:3.30.420.470 138 344 2.3E-12 T 11-10-2018 AL543_11295 2751832f4c2c7d3c5b3bffbdb93bf2db 347 SUPERFAMILY SSF53098 220 316 8.19E-8 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_11295 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Pfam PF13551 Winged helix-turn helix 32 87 1.8E-7 T 11-10-2018 AL543_11295 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Pfam PF13592 Winged helix-turn helix 98 155 7.3E-20 T 11-10-2018 IPR025959 Winged helix-turn helix domain AL543_15410 2751832f4c2c7d3c5b3bffbdb93bf2db 347 SUPERFAMILY SSF46689 16 131 6.57E-25 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_15410 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Pfam PF13358 DDE superfamily endonuclease 169 312 1.4E-34 T 11-10-2018 IPR038717 Tc1-like transposase, DDE domain AL543_15410 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Gene3D G3DSA:3.30.420.470 138 344 2.3E-12 T 11-10-2018 AL543_15410 2751832f4c2c7d3c5b3bffbdb93bf2db 347 SUPERFAMILY SSF53098 220 316 8.19E-8 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_15410 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Pfam PF13551 Winged helix-turn helix 32 87 1.8E-7 T 11-10-2018 AL543_15410 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Pfam PF13592 Winged helix-turn helix 98 155 7.3E-20 T 11-10-2018 IPR025959 Winged helix-turn helix domain AL543_04630 2751832f4c2c7d3c5b3bffbdb93bf2db 347 SUPERFAMILY SSF46689 16 131 6.57E-25 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_04630 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Pfam PF13358 DDE superfamily endonuclease 169 312 1.4E-34 T 11-10-2018 IPR038717 Tc1-like transposase, DDE domain AL543_04630 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Gene3D G3DSA:3.30.420.470 138 344 2.3E-12 T 11-10-2018 AL543_04630 2751832f4c2c7d3c5b3bffbdb93bf2db 347 SUPERFAMILY SSF53098 220 316 8.19E-8 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_04630 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Pfam PF13551 Winged helix-turn helix 32 87 1.8E-7 T 11-10-2018 AL543_04630 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Pfam PF13592 Winged helix-turn helix 98 155 7.3E-20 T 11-10-2018 IPR025959 Winged helix-turn helix domain AL543_09160 2751832f4c2c7d3c5b3bffbdb93bf2db 347 SUPERFAMILY SSF46689 16 131 6.57E-25 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_09160 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Pfam PF13358 DDE superfamily endonuclease 169 312 1.4E-34 T 11-10-2018 IPR038717 Tc1-like transposase, DDE domain AL543_09160 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Gene3D G3DSA:3.30.420.470 138 344 2.3E-12 T 11-10-2018 AL543_09160 2751832f4c2c7d3c5b3bffbdb93bf2db 347 SUPERFAMILY SSF53098 220 316 8.19E-8 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_09160 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Pfam PF13551 Winged helix-turn helix 32 87 1.8E-7 T 11-10-2018 AL543_09160 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Pfam PF13592 Winged helix-turn helix 98 155 7.3E-20 T 11-10-2018 IPR025959 Winged helix-turn helix domain AL543_16110 2751832f4c2c7d3c5b3bffbdb93bf2db 347 SUPERFAMILY SSF46689 16 131 6.57E-25 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_16110 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Pfam PF13358 DDE superfamily endonuclease 169 312 1.4E-34 T 11-10-2018 IPR038717 Tc1-like transposase, DDE domain AL543_16110 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Gene3D G3DSA:3.30.420.470 138 344 2.3E-12 T 11-10-2018 AL543_16110 2751832f4c2c7d3c5b3bffbdb93bf2db 347 SUPERFAMILY SSF53098 220 316 8.19E-8 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_16110 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Pfam PF13551 Winged helix-turn helix 32 87 1.8E-7 T 11-10-2018 AL543_16110 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Pfam PF13592 Winged helix-turn helix 98 155 7.3E-20 T 11-10-2018 IPR025959 Winged helix-turn helix domain AL543_02945 2751832f4c2c7d3c5b3bffbdb93bf2db 347 SUPERFAMILY SSF46689 16 131 6.57E-25 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_02945 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Pfam PF13358 DDE superfamily endonuclease 169 312 1.4E-34 T 11-10-2018 IPR038717 Tc1-like transposase, DDE domain AL543_02945 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Gene3D G3DSA:3.30.420.470 138 344 2.3E-12 T 11-10-2018 AL543_02945 2751832f4c2c7d3c5b3bffbdb93bf2db 347 SUPERFAMILY SSF53098 220 316 8.19E-8 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_02945 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Pfam PF13551 Winged helix-turn helix 32 87 1.8E-7 T 11-10-2018 AL543_02945 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Pfam PF13592 Winged helix-turn helix 98 155 7.3E-20 T 11-10-2018 IPR025959 Winged helix-turn helix domain AL543_00520 2751832f4c2c7d3c5b3bffbdb93bf2db 347 SUPERFAMILY SSF46689 16 131 6.57E-25 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_00520 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Pfam PF13358 DDE superfamily endonuclease 169 312 1.4E-34 T 11-10-2018 IPR038717 Tc1-like transposase, DDE domain AL543_00520 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Gene3D G3DSA:3.30.420.470 138 344 2.3E-12 T 11-10-2018 AL543_00520 2751832f4c2c7d3c5b3bffbdb93bf2db 347 SUPERFAMILY SSF53098 220 316 8.19E-8 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_00520 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Pfam PF13551 Winged helix-turn helix 32 87 1.8E-7 T 11-10-2018 AL543_00520 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Pfam PF13592 Winged helix-turn helix 98 155 7.3E-20 T 11-10-2018 IPR025959 Winged helix-turn helix domain AL543_01660 2751832f4c2c7d3c5b3bffbdb93bf2db 347 SUPERFAMILY SSF46689 16 131 6.57E-25 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_01660 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Pfam PF13358 DDE superfamily endonuclease 169 312 1.4E-34 T 11-10-2018 IPR038717 Tc1-like transposase, DDE domain AL543_01660 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Gene3D G3DSA:3.30.420.470 138 344 2.3E-12 T 11-10-2018 AL543_01660 2751832f4c2c7d3c5b3bffbdb93bf2db 347 SUPERFAMILY SSF53098 220 316 8.19E-8 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_01660 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Pfam PF13551 Winged helix-turn helix 32 87 1.8E-7 T 11-10-2018 AL543_01660 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Pfam PF13592 Winged helix-turn helix 98 155 7.3E-20 T 11-10-2018 IPR025959 Winged helix-turn helix domain AL543_09320 2751832f4c2c7d3c5b3bffbdb93bf2db 347 SUPERFAMILY SSF46689 16 131 6.57E-25 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_09320 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Pfam PF13358 DDE superfamily endonuclease 169 312 1.4E-34 T 11-10-2018 IPR038717 Tc1-like transposase, DDE domain AL543_09320 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Gene3D G3DSA:3.30.420.470 138 344 2.3E-12 T 11-10-2018 AL543_09320 2751832f4c2c7d3c5b3bffbdb93bf2db 347 SUPERFAMILY SSF53098 220 316 8.19E-8 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_09320 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Pfam PF13551 Winged helix-turn helix 32 87 1.8E-7 T 11-10-2018 AL543_09320 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Pfam PF13592 Winged helix-turn helix 98 155 7.3E-20 T 11-10-2018 IPR025959 Winged helix-turn helix domain AL543_02160 2751832f4c2c7d3c5b3bffbdb93bf2db 347 SUPERFAMILY SSF46689 16 131 6.57E-25 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_02160 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Pfam PF13358 DDE superfamily endonuclease 169 312 1.4E-34 T 11-10-2018 IPR038717 Tc1-like transposase, DDE domain AL543_02160 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Gene3D G3DSA:3.30.420.470 138 344 2.3E-12 T 11-10-2018 AL543_02160 2751832f4c2c7d3c5b3bffbdb93bf2db 347 SUPERFAMILY SSF53098 220 316 8.19E-8 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_02160 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Pfam PF13551 Winged helix-turn helix 32 87 1.8E-7 T 11-10-2018 AL543_02160 2751832f4c2c7d3c5b3bffbdb93bf2db 347 Pfam PF13592 Winged helix-turn helix 98 155 7.3E-20 T 11-10-2018 IPR025959 Winged helix-turn helix domain AL543_07985 221b0435dc2c6f197d978058d6ef8f58 236 SUPERFAMILY SSF51366 16 230 1.74E-76 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AL543_07985 221b0435dc2c6f197d978058d6ef8f58 236 Pfam PF00834 Ribulose-phosphate 3 epimerase family 18 215 9.2E-92 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AL543_07985 221b0435dc2c6f197d978058d6ef8f58 236 PIRSF PIRSF001461 12 236 1.2E-106 T 11-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AL543_07985 221b0435dc2c6f197d978058d6ef8f58 236 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 17 228 6.0E-100 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AL543_07985 221b0435dc2c6f197d978058d6ef8f58 236 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 45 59 - T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AL543_07985 221b0435dc2c6f197d978058d6ef8f58 236 Gene3D G3DSA:3.20.20.70 17 234 4.5E-86 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_07985 221b0435dc2c6f197d978058d6ef8f58 236 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 148 170 - T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AL543_13960 1941ace5968f6ebcc8cd41cfe43694be 573 PIRSF PIRSF000732 1 573 1.4E-220 T 11-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 AL543_13960 1941ace5968f6ebcc8cd41cfe43694be 573 SUPERFAMILY SSF52009 125 243 5.49E-34 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 AL543_13960 1941ace5968f6ebcc8cd41cfe43694be 573 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 11-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AL543_13960 1941ace5968f6ebcc8cd41cfe43694be 573 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 1.4E-32 T 11-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AL543_13960 1941ace5968f6ebcc8cd41cfe43694be 573 SUPERFAMILY SSF51621 249 549 2.36E-110 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AL543_13960 1941ace5968f6ebcc8cd41cfe43694be 573 Gene3D G3DSA:3.20.20.60 234 573 4.7E-125 T 11-10-2018 AL543_13960 1941ace5968f6ebcc8cd41cfe43694be 573 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 565 2.8E-249 T 11-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 AL543_13960 1941ace5968f6ebcc8cd41cfe43694be 573 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 250 541 1.2E-123 T 11-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AL543_13960 1941ace5968f6ebcc8cd41cfe43694be 573 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 4.7E-20 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AL543_13960 1941ace5968f6ebcc8cd41cfe43694be 573 SUPERFAMILY SSF47831 24 143 3.4E-33 T 11-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 AL543_13960 1941ace5968f6ebcc8cd41cfe43694be 573 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 2.6E-30 T 11-10-2018 AL543_13960 1941ace5968f6ebcc8cd41cfe43694be 573 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 2.6E-30 T 11-10-2018 AL543_13960 1941ace5968f6ebcc8cd41cfe43694be 573 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 2.6E-30 T 11-10-2018 AL543_13960 1941ace5968f6ebcc8cd41cfe43694be 573 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 2.6E-30 T 11-10-2018 AL543_13960 1941ace5968f6ebcc8cd41cfe43694be 573 Gene3D G3DSA:3.50.30.10 4 233 1.2E-80 T 11-10-2018 AL543_13960 1941ace5968f6ebcc8cd41cfe43694be 573 Gene3D G3DSA:1.10.274.10 21 146 1.2E-80 T 11-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 AL543_13960 1941ace5968f6ebcc8cd41cfe43694be 573 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 11-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 AL543_04755 5b048387b5d0197978b3e9ed9cca6a3a 347 Pfam PF13384 Homeodomain-like domain 28 67 4.3E-7 T 11-10-2018 AL543_04755 5b048387b5d0197978b3e9ed9cca6a3a 347 SUPERFAMILY SSF53098 221 316 2.58E-7 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_04755 5b048387b5d0197978b3e9ed9cca6a3a 347 Gene3D G3DSA:3.30.420.470 138 344 4.4E-12 T 11-10-2018 AL543_04755 5b048387b5d0197978b3e9ed9cca6a3a 347 Pfam PF13358 DDE superfamily endonuclease 169 312 1.9E-34 T 11-10-2018 IPR038717 Tc1-like transposase, DDE domain AL543_04755 5b048387b5d0197978b3e9ed9cca6a3a 347 Pfam PF13592 Winged helix-turn helix 99 155 3.7E-18 T 11-10-2018 IPR025959 Winged helix-turn helix domain AL543_04755 5b048387b5d0197978b3e9ed9cca6a3a 347 SUPERFAMILY SSF46689 16 131 8.96E-24 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_03380 5b048387b5d0197978b3e9ed9cca6a3a 347 Pfam PF13384 Homeodomain-like domain 28 67 4.3E-7 T 11-10-2018 AL543_03380 5b048387b5d0197978b3e9ed9cca6a3a 347 SUPERFAMILY SSF53098 221 316 2.58E-7 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_03380 5b048387b5d0197978b3e9ed9cca6a3a 347 Gene3D G3DSA:3.30.420.470 138 344 4.4E-12 T 11-10-2018 AL543_03380 5b048387b5d0197978b3e9ed9cca6a3a 347 Pfam PF13358 DDE superfamily endonuclease 169 312 1.9E-34 T 11-10-2018 IPR038717 Tc1-like transposase, DDE domain AL543_03380 5b048387b5d0197978b3e9ed9cca6a3a 347 Pfam PF13592 Winged helix-turn helix 99 155 3.7E-18 T 11-10-2018 IPR025959 Winged helix-turn helix domain AL543_03380 5b048387b5d0197978b3e9ed9cca6a3a 347 SUPERFAMILY SSF46689 16 131 8.96E-24 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_04640 5b048387b5d0197978b3e9ed9cca6a3a 347 Pfam PF13384 Homeodomain-like domain 28 67 4.3E-7 T 11-10-2018 AL543_04640 5b048387b5d0197978b3e9ed9cca6a3a 347 SUPERFAMILY SSF53098 221 316 2.58E-7 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_04640 5b048387b5d0197978b3e9ed9cca6a3a 347 Gene3D G3DSA:3.30.420.470 138 344 4.4E-12 T 11-10-2018 AL543_04640 5b048387b5d0197978b3e9ed9cca6a3a 347 Pfam PF13358 DDE superfamily endonuclease 169 312 1.9E-34 T 11-10-2018 IPR038717 Tc1-like transposase, DDE domain AL543_04640 5b048387b5d0197978b3e9ed9cca6a3a 347 Pfam PF13592 Winged helix-turn helix 99 155 3.7E-18 T 11-10-2018 IPR025959 Winged helix-turn helix domain AL543_04640 5b048387b5d0197978b3e9ed9cca6a3a 347 SUPERFAMILY SSF46689 16 131 8.96E-24 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_14665 5b048387b5d0197978b3e9ed9cca6a3a 347 Pfam PF13384 Homeodomain-like domain 28 67 4.3E-7 T 11-10-2018 AL543_14665 5b048387b5d0197978b3e9ed9cca6a3a 347 SUPERFAMILY SSF53098 221 316 2.58E-7 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_14665 5b048387b5d0197978b3e9ed9cca6a3a 347 Gene3D G3DSA:3.30.420.470 138 344 4.4E-12 T 11-10-2018 AL543_14665 5b048387b5d0197978b3e9ed9cca6a3a 347 Pfam PF13358 DDE superfamily endonuclease 169 312 1.9E-34 T 11-10-2018 IPR038717 Tc1-like transposase, DDE domain AL543_14665 5b048387b5d0197978b3e9ed9cca6a3a 347 Pfam PF13592 Winged helix-turn helix 99 155 3.7E-18 T 11-10-2018 IPR025959 Winged helix-turn helix domain AL543_14665 5b048387b5d0197978b3e9ed9cca6a3a 347 SUPERFAMILY SSF46689 16 131 8.96E-24 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_01005 5b048387b5d0197978b3e9ed9cca6a3a 347 Pfam PF13384 Homeodomain-like domain 28 67 4.3E-7 T 11-10-2018 AL543_01005 5b048387b5d0197978b3e9ed9cca6a3a 347 SUPERFAMILY SSF53098 221 316 2.58E-7 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_01005 5b048387b5d0197978b3e9ed9cca6a3a 347 Gene3D G3DSA:3.30.420.470 138 344 4.4E-12 T 11-10-2018 AL543_01005 5b048387b5d0197978b3e9ed9cca6a3a 347 Pfam PF13358 DDE superfamily endonuclease 169 312 1.9E-34 T 11-10-2018 IPR038717 Tc1-like transposase, DDE domain AL543_01005 5b048387b5d0197978b3e9ed9cca6a3a 347 Pfam PF13592 Winged helix-turn helix 99 155 3.7E-18 T 11-10-2018 IPR025959 Winged helix-turn helix domain AL543_01005 5b048387b5d0197978b3e9ed9cca6a3a 347 SUPERFAMILY SSF46689 16 131 8.96E-24 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_07440 e7ab1f1b9e589990cc905aa66bdd0520 261 Pfam PF01553 Acyltransferase 79 199 1.9E-30 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AL543_07440 e7ab1f1b9e589990cc905aa66bdd0520 261 SUPERFAMILY SSF69593 17 256 7.59E-59 T 11-10-2018 AL543_07440 e7ab1f1b9e589990cc905aa66bdd0520 261 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 69 199 3.7E-44 T 11-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 AL543_07440 e7ab1f1b9e589990cc905aa66bdd0520 261 SMART SM00563 86 201 5.2E-40 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AL543_06550 811f47daad05978adcfd2e8fbc1c5e2d 207 Pfam PF10144 Bacterial virulence factor haemolysin 6 151 3.3E-44 T 11-10-2018 IPR019305 Uncharacterised protein family Smp AL543_16070 f50728dab0ef99c2b48e03e4a9e9f5f6 368 PIRSF PIRSF001123 225 368 0.011 T 11-10-2018 IPR008007 Peptidase M42 AL543_16070 f50728dab0ef99c2b48e03e4a9e9f5f6 368 PIRSF PIRSF001123 6 105 0.036 T 11-10-2018 IPR008007 Peptidase M42 AL543_16070 f50728dab0ef99c2b48e03e4a9e9f5f6 368 PIRSF PIRSF001123 99 189 5.8E-5 T 11-10-2018 IPR008007 Peptidase M42 AL543_16070 f50728dab0ef99c2b48e03e4a9e9f5f6 368 Gene3D G3DSA:3.40.630.10 16 362 5.5E-115 T 11-10-2018 AL543_16070 f50728dab0ef99c2b48e03e4a9e9f5f6 368 SUPERFAMILY SSF55031 178 289 5.36E-22 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AL543_16070 f50728dab0ef99c2b48e03e4a9e9f5f6 368 TIGRFAM TIGR01883 PepT-like: peptidase T-like protein 8 367 5.6E-185 T 11-10-2018 IPR010162 Peptidase M20B, peptidase T-like AL543_16070 f50728dab0ef99c2b48e03e4a9e9f5f6 368 Gene3D G3DSA:3.30.70.360 176 287 5.5E-115 T 11-10-2018 AL543_16070 f50728dab0ef99c2b48e03e4a9e9f5f6 368 SUPERFAMILY SSF53187 7 365 4.98E-59 T 11-10-2018 AL543_16070 f50728dab0ef99c2b48e03e4a9e9f5f6 368 Pfam PF07687 Peptidase dimerisation domain 185 273 6.3E-13 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain AL543_16070 f50728dab0ef99c2b48e03e4a9e9f5f6 368 Pfam PF01546 Peptidase family M20/M25/M40 72 365 9.7E-21 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 AL543_02150 dc077c88c3dbc8db2d2e83b8fd658fb7 1050 SUPERFAMILY SSF53955 810 1049 2.67E-31 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AL543_02150 dc077c88c3dbc8db2d2e83b8fd658fb7 1050 SUPERFAMILY SSF69349 447 628 2.35E-45 T 11-10-2018 AL543_02150 dc077c88c3dbc8db2d2e83b8fd658fb7 1050 Gene3D G3DSA:2.30.110.50 15 336 8.6E-81 T 11-10-2018 AL543_02150 dc077c88c3dbc8db2d2e83b8fd658fb7 1050 SUPERFAMILY SSF69279 6 190 6.23E-49 T 11-10-2018 AL543_02150 dc077c88c3dbc8db2d2e83b8fd658fb7 1050 Pfam PF01471 Putative peptidoglycan binding domain 731 773 2.0E-7 T 11-10-2018 IPR002477 Peptidoglycan binding-like AL543_02150 dc077c88c3dbc8db2d2e83b8fd658fb7 1050 SUPERFAMILY SSF69255 369 456 4.71E-32 T 11-10-2018 AL543_02150 dc077c88c3dbc8db2d2e83b8fd658fb7 1050 Gene3D G3DSA:1.10.101.10 716 805 4.3E-14 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 AL543_02150 dc077c88c3dbc8db2d2e83b8fd658fb7 1050 Gene3D G3DSA:2.40.50.230 362 461 5.6E-40 T 11-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily AL543_02150 dc077c88c3dbc8db2d2e83b8fd658fb7 1050 Gene3D G3DSA:3.30.1920.30 228 291 8.6E-81 T 11-10-2018 AL543_02150 dc077c88c3dbc8db2d2e83b8fd658fb7 1050 SUPERFAMILY SSF69279 199 370 1.0E-40 T 11-10-2018 AL543_02150 dc077c88c3dbc8db2d2e83b8fd658fb7 1050 Pfam PF05954 Phage late control gene D protein (GPD) 41 334 2.1E-69 T 11-10-2018 AL543_02150 dc077c88c3dbc8db2d2e83b8fd658fb7 1050 Gene3D G3DSA:3.55.50.10 104 195 8.6E-81 T 11-10-2018 AL543_02150 dc077c88c3dbc8db2d2e83b8fd658fb7 1050 SUPERFAMILY SSF47090 724 801 9.22E-12 T 11-10-2018 IPR036365 PGBD-like superfamily AL543_02150 dc077c88c3dbc8db2d2e83b8fd658fb7 1050 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 19 508 4.6E-126 T 11-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein AL543_02150 dc077c88c3dbc8db2d2e83b8fd658fb7 1050 Gene3D G3DSA:1.10.530.70 811 1049 2.6E-14 T 11-10-2018 AL543_02150 dc077c88c3dbc8db2d2e83b8fd658fb7 1050 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 6 526 1.9E-179 T 11-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset AL543_08735 c04573cd94734959c3e45f3f04345d34 898 Pfam PF13538 UvrD-like helicase C-terminal domain 827 874 4.5E-10 T 11-10-2018 IPR027785 UvrD-like helicase C-terminal domain AL543_08735 c04573cd94734959c3e45f3f04345d34 898 Gene3D G3DSA:3.40.50.300 704 894 3.5E-13 T 11-10-2018 AL543_08735 c04573cd94734959c3e45f3f04345d34 898 Gene3D G3DSA:3.40.50.300 459 681 2.5E-6 T 11-10-2018 AL543_08735 c04573cd94734959c3e45f3f04345d34 898 Gene3D G3DSA:3.40.50.300 219 450 2.4E-5 T 11-10-2018 AL543_08735 c04573cd94734959c3e45f3f04345d34 898 SUPERFAMILY SSF52540 221 881 8.99E-32 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_06630 cbf132cbc93c7a90f9caeba5d3d232e7 318 SUPERFAMILY SSF55060 178 294 3.96E-31 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily AL543_06630 cbf132cbc93c7a90f9caeba5d3d232e7 318 Pfam PF08544 GHMP kinases C terminal 223 291 7.6E-8 T 11-10-2018 IPR013750 GHMP kinase, C-terminal domain AL543_06630 cbf132cbc93c7a90f9caeba5d3d232e7 318 PIRSF PIRSF000676 1 316 2.3E-79 T 11-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 AL543_06630 cbf132cbc93c7a90f9caeba5d3d232e7 318 Gene3D G3DSA:3.30.230.10 5 173 7.0E-90 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL543_06630 cbf132cbc93c7a90f9caeba5d3d232e7 318 PRINTS PR00958 Homoserine kinase signature 181 198 1.7E-31 T 11-10-2018 AL543_06630 cbf132cbc93c7a90f9caeba5d3d232e7 318 PRINTS PR00958 Homoserine kinase signature 260 275 1.7E-31 T 11-10-2018 AL543_06630 cbf132cbc93c7a90f9caeba5d3d232e7 318 PRINTS PR00958 Homoserine kinase signature 103 118 1.7E-31 T 11-10-2018 AL543_06630 cbf132cbc93c7a90f9caeba5d3d232e7 318 PRINTS PR00958 Homoserine kinase signature 10 25 1.7E-31 T 11-10-2018 AL543_06630 cbf132cbc93c7a90f9caeba5d3d232e7 318 PRINTS PR00958 Homoserine kinase signature 143 156 1.7E-31 T 11-10-2018 AL543_06630 cbf132cbc93c7a90f9caeba5d3d232e7 318 Gene3D G3DSA:3.30.70.890 174 283 7.0E-90 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily AL543_06630 cbf132cbc93c7a90f9caeba5d3d232e7 318 Pfam PF00288 GHMP kinases N terminal domain 90 156 1.2E-12 T 11-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 AL543_06630 cbf132cbc93c7a90f9caeba5d3d232e7 318 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 96 107 - T 11-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 AL543_06630 cbf132cbc93c7a90f9caeba5d3d232e7 318 SUPERFAMILY SSF54211 3 191 8.35E-33 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL543_06630 cbf132cbc93c7a90f9caeba5d3d232e7 318 TIGRFAM TIGR00191 thrB: homoserine kinase 3 314 3.1E-108 T 11-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 AL543_06630 cbf132cbc93c7a90f9caeba5d3d232e7 318 Hamap MF_00384 Homoserine kinase [thrB]. 5 314 28.67 T 11-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 AL543_17855 32c63943b0c5c605b2dea1ed75d2b475 784 Gene3D G3DSA:3.80.30.20 366 628 4.5E-12 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AL543_17855 32c63943b0c5c605b2dea1ed75d2b475 784 Pfam PF11842 Domain of unknown function (DUF3362) 585 725 1.2E-41 T 11-10-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal AL543_17855 32c63943b0c5c605b2dea1ed75d2b475 784 SMART SM00729 367 617 4.1E-4 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AL543_17855 32c63943b0c5c605b2dea1ed75d2b475 784 SUPERFAMILY SSF102114 368 605 1.57E-9 T 11-10-2018 AL543_17855 32c63943b0c5c605b2dea1ed75d2b475 784 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 371 391 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 AL543_17855 32c63943b0c5c605b2dea1ed75d2b475 784 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 24 636 7.8E-259 T 11-10-2018 IPR022946 Uncharacterised protein family UPF0313 AL543_17855 32c63943b0c5c605b2dea1ed75d2b475 784 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 24 638 48.545 T 11-10-2018 IPR022946 Uncharacterised protein family UPF0313 AL543_17855 32c63943b0c5c605b2dea1ed75d2b475 784 Pfam PF04055 Radical SAM superfamily 371 576 5.3E-21 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL543_17855 32c63943b0c5c605b2dea1ed75d2b475 784 Pfam PF08497 Radical SAM N-terminal 24 370 1.4E-141 T 11-10-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal AL543_15470 073464c84b8f66ff0b5a069257e287fc 295 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AL543_15470 073464c84b8f66ff0b5a069257e287fc 295 SUPERFAMILY SSF53927 153 283 1.02E-35 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AL543_15470 073464c84b8f66ff0b5a069257e287fc 295 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 29 295 4.3E-111 T 11-10-2018 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 AL543_15470 073464c84b8f66ff0b5a069257e287fc 295 Gene3D G3DSA:3.40.140.10 29 179 6.6E-44 T 11-10-2018 AL543_15470 073464c84b8f66ff0b5a069257e287fc 295 SUPERFAMILY SSF53927 1 147 3.96E-41 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AL543_15470 073464c84b8f66ff0b5a069257e287fc 295 PIRSF PIRSF006334 14 295 1.2E-107 T 11-10-2018 AL543_15470 073464c84b8f66ff0b5a069257e287fc 295 Gene3D G3DSA:3.40.140.10 180 295 6.8E-29 T 11-10-2018 AL543_15470 073464c84b8f66ff0b5a069257e287fc 295 Hamap MF_01558 Cytidine deaminase [cdd]. 1 293 49.236 T 11-10-2018 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 AL543_15470 073464c84b8f66ff0b5a069257e287fc 295 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 157 277 3.4E-41 T 11-10-2018 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 AL543_15470 073464c84b8f66ff0b5a069257e287fc 295 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 62 140 1.1E-12 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain AL543_16335 4953aad639d3706df54dea8fbd4df417 438 SMART SM00091 25 93 4.7 T 11-10-2018 IPR000014 PAS domain AL543_16335 4953aad639d3706df54dea8fbd4df417 438 SMART SM00091 148 214 4.4 T 11-10-2018 IPR000014 PAS domain AL543_16335 4953aad639d3706df54dea8fbd4df417 438 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 37 145 1.7E-18 T 11-10-2018 IPR000014 PAS domain AL543_16335 4953aad639d3706df54dea8fbd4df417 438 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 158 262 8.0E-13 T 11-10-2018 IPR000014 PAS domain AL543_16335 4953aad639d3706df54dea8fbd4df417 438 Gene3D G3DSA:3.30.450.20 135 237 4.0E-7 T 11-10-2018 AL543_16335 4953aad639d3706df54dea8fbd4df417 438 SUPERFAMILY SSF55785 159 261 4.71E-21 T 11-10-2018 IPR035965 PAS domain superfamily AL543_16335 4953aad639d3706df54dea8fbd4df417 438 SUPERFAMILY SSF58104 235 437 1.83E-53 T 11-10-2018 AL543_16335 4953aad639d3706df54dea8fbd4df417 438 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 296 436 1.9E-36 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_16335 4953aad639d3706df54dea8fbd4df417 438 Gene3D G3DSA:3.30.450.20 14 134 1.3E-21 T 11-10-2018 AL543_16335 4953aad639d3706df54dea8fbd4df417 438 SUPERFAMILY SSF55785 36 138 5.93E-25 T 11-10-2018 IPR035965 PAS domain superfamily AL543_16335 4953aad639d3706df54dea8fbd4df417 438 SMART SM00283 233 437 1.7E-23 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_16335 4953aad639d3706df54dea8fbd4df417 438 Gene3D G3DSA:1.10.287.950 240 438 1.1E-48 T 11-10-2018 AL543_16335 4953aad639d3706df54dea8fbd4df417 438 Pfam PF08448 PAS fold 159 262 6.3E-10 T 11-10-2018 IPR013656 PAS fold-4 AL543_16335 4953aad639d3706df54dea8fbd4df417 438 Pfam PF08447 PAS fold 49 134 5.8E-14 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 AL543_16335 4953aad639d3706df54dea8fbd4df417 438 SMART SM00086 99 141 7.2E-5 T 11-10-2018 IPR001610 PAC motif AL543_16335 4953aad639d3706df54dea8fbd4df417 438 SMART SM00086 219 261 0.074 T 11-10-2018 IPR001610 PAC motif AL543_14860 5579f0c5f6e5dd116d91a6b6e40e909e 428 SUPERFAMILY SSF53383 5 421 5.31E-135 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL543_14860 5579f0c5f6e5dd116d91a6b6e40e909e 428 Gene3D G3DSA:3.90.1150.10 11 414 1.1E-171 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL543_14860 5579f0c5f6e5dd116d91a6b6e40e909e 428 PIRSF PIRSF000521 24 423 1.8E-36 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL543_14860 5579f0c5f6e5dd116d91a6b6e40e909e 428 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 12 420 8.3E-180 T 11-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 AL543_14860 5579f0c5f6e5dd116d91a6b6e40e909e 428 Gene3D G3DSA:3.40.640.10 60 329 1.1E-171 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL543_14860 5579f0c5f6e5dd116d91a6b6e40e909e 428 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 423 49.08 T 11-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 AL543_14860 5579f0c5f6e5dd116d91a6b6e40e909e 428 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 241 278 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL543_14860 5579f0c5f6e5dd116d91a6b6e40e909e 428 Pfam PF00202 Aminotransferase class-III 26 419 3.3E-131 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL543_17570 5bb0f56f1845ceab0c7733b2a34b5d05 1194 SMART SM00448 965 1079 1.3E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_17570 5bb0f56f1845ceab0c7733b2a34b5d05 1194 SMART SM00387 780 891 3.3E-39 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_17570 5bb0f56f1845ceab0c7733b2a34b5d05 1194 SUPERFAMILY SSF47226 1063 1175 3.66E-8 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AL543_17570 5bb0f56f1845ceab0c7733b2a34b5d05 1194 Gene3D G3DSA:3.40.50.2300 966 1091 1.6E-31 T 11-10-2018 AL543_17570 5bb0f56f1845ceab0c7733b2a34b5d05 1194 Gene3D G3DSA:1.10.287.130 658 734 3.7E-17 T 11-10-2018 AL543_17570 5bb0f56f1845ceab0c7733b2a34b5d05 1194 SUPERFAMILY SSF47384 654 734 4.51E-17 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL543_17570 5bb0f56f1845ceab0c7733b2a34b5d05 1194 Gene3D G3DSA:3.30.450.20 529 657 1.4E-7 T 11-10-2018 AL543_17570 5bb0f56f1845ceab0c7733b2a34b5d05 1194 Gene3D G3DSA:3.40.190.10 28 237 2.4E-31 T 11-10-2018 AL543_17570 5bb0f56f1845ceab0c7733b2a34b5d05 1194 SUPERFAMILY SSF53850 38 237 1.38E-24 T 11-10-2018 AL543_17570 5bb0f56f1845ceab0c7733b2a34b5d05 1194 SUPERFAMILY SSF53850 271 488 5.18E-16 T 11-10-2018 AL543_17570 5bb0f56f1845ceab0c7733b2a34b5d05 1194 SUPERFAMILY SSF55874 722 889 3.01E-46 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_17570 5bb0f56f1845ceab0c7733b2a34b5d05 1194 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 55 237 6.8E-20 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL543_17570 5bb0f56f1845ceab0c7733b2a34b5d05 1194 Pfam PF00512 His Kinase A (phospho-acceptor) domain 669 732 2.7E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_17570 5bb0f56f1845ceab0c7733b2a34b5d05 1194 Pfam PF00072 Response regulator receiver domain 968 1078 2.2E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_17570 5bb0f56f1845ceab0c7733b2a34b5d05 1194 Gene3D G3DSA:3.40.190.10 270 482 1.9E-20 T 11-10-2018 AL543_17570 5bb0f56f1845ceab0c7733b2a34b5d05 1194 Gene3D G3DSA:3.30.565.10 735 892 1.2E-45 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_17570 5bb0f56f1845ceab0c7733b2a34b5d05 1194 PRINTS PR00344 Bacterial sensor protein C-terminal signature 851 869 1.5E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_17570 5bb0f56f1845ceab0c7733b2a34b5d05 1194 PRINTS PR00344 Bacterial sensor protein C-terminal signature 816 830 1.5E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_17570 5bb0f56f1845ceab0c7733b2a34b5d05 1194 PRINTS PR00344 Bacterial sensor protein C-terminal signature 834 844 1.5E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_17570 5bb0f56f1845ceab0c7733b2a34b5d05 1194 PRINTS PR00344 Bacterial sensor protein C-terminal signature 875 888 1.5E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_17570 5bb0f56f1845ceab0c7733b2a34b5d05 1194 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 781 888 1.3E-30 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_17570 5bb0f56f1845ceab0c7733b2a34b5d05 1194 SMART SM00918 283 328 0.0084 T 11-10-2018 IPR019594 Ionotropic glutamate receptor, L-glutamate and glycine-binding domain GO:0004970|GO:0016020 AL543_17570 5bb0f56f1845ceab0c7733b2a34b5d05 1194 SUPERFAMILY SSF52172 968 1088 3.7E-32 T 11-10-2018 IPR011006 CheY-like superfamily AL543_17570 5bb0f56f1845ceab0c7733b2a34b5d05 1194 Gene3D G3DSA:3.40.190.10 123 213 2.4E-31 T 11-10-2018 AL543_17570 5bb0f56f1845ceab0c7733b2a34b5d05 1194 Gene3D G3DSA:3.40.190.10 355 447 1.9E-20 T 11-10-2018 AL543_17570 5bb0f56f1845ceab0c7733b2a34b5d05 1194 SMART SM00388 668 733 9.0E-17 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_17570 5bb0f56f1845ceab0c7733b2a34b5d05 1194 SMART SM00062 37 257 1.4E-9 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL543_11460 95e5088b4282f202804e4d13eeccd618 541 Pfam PF17200 Single Cache domain 2 36 185 9.9E-35 T 11-10-2018 IPR033480 Single Cache domain 2 AL543_11460 95e5088b4282f202804e4d13eeccd618 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 324 503 2.8E-41 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_11460 95e5088b4282f202804e4d13eeccd618 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 3 28 1.0E-27 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL543_11460 95e5088b4282f202804e4d13eeccd618 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 375 402 1.0E-27 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL543_11460 95e5088b4282f202804e4d13eeccd618 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 184 204 1.0E-27 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL543_11460 95e5088b4282f202804e4d13eeccd618 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 404 433 1.0E-27 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL543_11460 95e5088b4282f202804e4d13eeccd618 541 SMART SM00283 277 538 2.4E-67 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_11460 95e5088b4282f202804e4d13eeccd618 541 SUPERFAMILY SSF58104 245 539 1.57E-67 T 11-10-2018 AL543_11460 95e5088b4282f202804e4d13eeccd618 541 SMART SM01049 30 124 3.1E-19 T 11-10-2018 IPR033480 Single Cache domain 2 AL543_11460 95e5088b4282f202804e4d13eeccd618 541 Gene3D G3DSA:1.10.287.950 246 540 2.0E-62 T 11-10-2018 AL543_11460 95e5088b4282f202804e4d13eeccd618 541 Gene3D G3DSA:3.30.450.20 33 186 1.2E-31 T 11-10-2018 AL543_01750 f2d0882a3d232c3430d2f0a3a8e851b2 323 SUPERFAMILY SSF55909 20 316 1.34E-38 T 11-10-2018 AL543_01750 f2d0882a3d232c3430d2f0a3a8e851b2 323 Pfam PF02274 Amidinotransferase 24 319 1.2E-72 T 11-10-2018 AL543_01750 f2d0882a3d232c3430d2f0a3a8e851b2 323 PIRSF PIRSF028188 4 322 6.6E-151 T 11-10-2018 IPR014541 Predicted amidinotransferase, FN0238 type AL543_01750 f2d0882a3d232c3430d2f0a3a8e851b2 323 Gene3D G3DSA:3.75.10.10 18 314 2.0E-45 T 11-10-2018 AL543_19140 6f727851b7c5aa31bc49fa1b6b0d2398 263 SUPERFAMILY SSF53474 11 260 1.76E-46 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL543_19140 6f727851b7c5aa31bc49fa1b6b0d2398 263 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 6 259 34.125 T 11-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 AL543_19140 6f727851b7c5aa31bc49fa1b6b0d2398 263 Pfam PF12697 Alpha/beta hydrolase family 18 252 9.1E-20 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AL543_19140 6f727851b7c5aa31bc49fa1b6b0d2398 263 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 15 259 2.3E-84 T 11-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 AL543_19140 6f727851b7c5aa31bc49fa1b6b0d2398 263 Gene3D G3DSA:3.40.50.1820 1 262 8.9E-76 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL543_20065 866a7af6e8e419261af466c39af1b8fe 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 1.0E-33 T 11-10-2018 IPR002220 DapA-like GO:0016829 AL543_20065 866a7af6e8e419261af466c39af1b8fe 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 1.0E-33 T 11-10-2018 IPR002220 DapA-like GO:0016829 AL543_20065 866a7af6e8e419261af466c39af1b8fe 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 1.0E-33 T 11-10-2018 IPR002220 DapA-like GO:0016829 AL543_20065 866a7af6e8e419261af466c39af1b8fe 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 1.0E-33 T 11-10-2018 IPR002220 DapA-like GO:0016829 AL543_20065 866a7af6e8e419261af466c39af1b8fe 292 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 288 64.094 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL543_20065 866a7af6e8e419261af466c39af1b8fe 292 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 288 1.3E-115 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL543_20065 866a7af6e8e419261af466c39af1b8fe 292 SUPERFAMILY SSF51569 2 288 1.05E-96 T 11-10-2018 AL543_20065 866a7af6e8e419261af466c39af1b8fe 292 PIRSF PIRSF001365 1 290 2.5E-88 T 11-10-2018 IPR002220 DapA-like GO:0016829 AL543_20065 866a7af6e8e419261af466c39af1b8fe 292 SMART SM01130 1 290 5.6E-135 T 11-10-2018 IPR002220 DapA-like GO:0016829 AL543_20065 866a7af6e8e419261af466c39af1b8fe 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 11-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 AL543_20065 866a7af6e8e419261af466c39af1b8fe 292 Pfam PF00701 Dihydrodipicolinate synthetase family 2 288 1.4E-107 T 11-10-2018 IPR002220 DapA-like GO:0016829 AL543_20065 866a7af6e8e419261af466c39af1b8fe 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 11-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL543_20065 866a7af6e8e419261af466c39af1b8fe 292 Gene3D G3DSA:3.20.20.70 1 291 4.4E-107 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_01150 e049effa38b59fc11ebdb1e112476a68 704 SMART SM00382 495 681 1.5E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_01150 e049effa38b59fc11ebdb1e112476a68 704 Gene3D G3DSA:3.40.50.300 461 703 4.1E-75 T 11-10-2018 AL543_01150 e049effa38b59fc11ebdb1e112476a68 704 Pfam PF00664 ABC transporter transmembrane region 158 417 3.5E-24 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AL543_01150 e049effa38b59fc11ebdb1e112476a68 704 SUPERFAMILY SSF52540 459 692 1.81E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_01150 e049effa38b59fc11ebdb1e112476a68 704 Pfam PF00005 ABC transporter 487 635 6.8E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_01150 e049effa38b59fc11ebdb1e112476a68 704 SUPERFAMILY SSF90123 137 452 2.62E-51 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AL543_01150 e049effa38b59fc11ebdb1e112476a68 704 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 3 698 4.4E-291 T 11-10-2018 IPR017750 ATPase, type I secretion system AL543_01150 e049effa38b59fc11ebdb1e112476a68 704 Gene3D G3DSA:3.90.70.10 1 126 1.8E-33 T 11-10-2018 AL543_01150 e049effa38b59fc11ebdb1e112476a68 704 Gene3D G3DSA:1.20.1560.10 142 454 1.8E-57 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AL543_18400 9e87ed47d0fcbc067d68511cc415babc 691 SMART SM00491 535 671 2.4E-29 T 11-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AL543_18400 9e87ed47d0fcbc067d68511cc415babc 691 Hamap MF_02205 ATP-dependent DNA helicase DinG [dinG]. 33 690 36.728 T 11-10-2018 IPR039000 ATP-dependent DNA helicase DinG GO:0004003 AL543_18400 9e87ed47d0fcbc067d68511cc415babc 691 SUPERFAMILY SSF52540 16 666 3.51E-15 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_18400 9e87ed47d0fcbc067d68511cc415babc 691 Pfam PF06733 DEAD_2 195 263 8.7E-6 T 11-10-2018 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 AL543_18400 9e87ed47d0fcbc067d68511cc415babc 691 Gene3D G3DSA:3.40.50.300 502 690 1.4E-34 T 11-10-2018 AL543_18400 9e87ed47d0fcbc067d68511cc415babc 691 Pfam PF13307 Helicase C-terminal domain 525 684 3.5E-38 T 11-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AL543_18400 9e87ed47d0fcbc067d68511cc415babc 691 Gene3D G3DSA:3.40.50.300 27 295 3.1E-39 T 11-10-2018 AL543_18400 9e87ed47d0fcbc067d68511cc415babc 691 SUPERFAMILY SSF52540 511 666 4.87E-5 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_19125 9c65f257ce08a6d642096eacb3be4bec 477 SUPERFAMILY SSF56801 8 470 2.88E-87 T 11-10-2018 AL543_19125 9c65f257ce08a6d642096eacb3be4bec 477 Gene3D G3DSA:3.30.300.30 374 474 2.7E-15 T 11-10-2018 AL543_19125 9c65f257ce08a6d642096eacb3be4bec 477 Pfam PF00501 AMP-binding enzyme 15 375 3.7E-51 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AL543_19125 9c65f257ce08a6d642096eacb3be4bec 477 Gene3D G3DSA:3.40.50.12780 6 373 1.4E-65 T 11-10-2018 AL543_19125 9c65f257ce08a6d642096eacb3be4bec 477 Pfam PF13193 AMP-binding enzyme C-terminal domain 384 441 3.7E-5 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL543_19125 9c65f257ce08a6d642096eacb3be4bec 477 ProSitePatterns PS00455 Putative AMP-binding domain signature. 158 169 - T 11-10-2018 IPR020845 AMP-binding, conserved site AL543_19125 9c65f257ce08a6d642096eacb3be4bec 477 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 33 462 1.1E-159 T 11-10-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 AL543_15380 4c26613f64eae4e7c6c8ffd2a7066554 185 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AL543_15380 4c26613f64eae4e7c6c8ffd2a7066554 185 Gene3D G3DSA:1.20.120.1760 2 180 2.3E-17 T 11-10-2018 AL543_15380 4c26613f64eae4e7c6c8ffd2a7066554 185 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 3 180 1.4E-54 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AL543_15380 4c26613f64eae4e7c6c8ffd2a7066554 185 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 2.0E-17 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AL543_15380 4c26613f64eae4e7c6c8ffd2a7066554 185 PIRSF PIRSF000847 1 184 6.8E-45 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AL543_00505 b1595074e966806de64d9a73a5339f6e 605 SUPERFAMILY SSF50800 3 264 6.28E-17 T 11-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily AL543_00505 b1595074e966806de64d9a73a5339f6e 605 SUPERFAMILY SSF63380 275 380 1.16E-27 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AL543_00505 b1595074e966806de64d9a73a5339f6e 605 SUPERFAMILY SSF52343 368 508 7.07E-37 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AL543_00505 b1595074e966806de64d9a73a5339f6e 605 SUPERFAMILY SSF141673 6 133 1.7E-29 T 11-10-2018 AL543_00505 b1595074e966806de64d9a73a5339f6e 605 SUPERFAMILY SSF54292 502 605 1.97E-26 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AL543_00505 b1595074e966806de64d9a73a5339f6e 605 Pfam PF00970 Oxidoreductase FAD-binding domain 284 378 4.9E-14 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 AL543_00505 b1595074e966806de64d9a73a5339f6e 605 Pfam PF03476 MOSC N-terminal beta barrel domain 5 117 1.1E-30 T 11-10-2018 IPR005303 MOSC, N-terminal beta barrel KEGG: 00790+2.8.1.9|MetaCyc: PWY-5963 AL543_00505 b1595074e966806de64d9a73a5339f6e 605 Gene3D G3DSA:3.10.20.30 507 605 6.9E-23 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AL543_00505 b1595074e966806de64d9a73a5339f6e 605 Pfam PF03473 MOSC domain 139 262 1.6E-30 T 11-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 AL543_00505 b1595074e966806de64d9a73a5339f6e 605 PRINTS PR00406 Cytochrome B5 reductase signature 478 486 1.0E-8 T 11-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AL543_00505 b1595074e966806de64d9a73a5339f6e 605 PRINTS PR00406 Cytochrome B5 reductase signature 425 436 1.0E-8 T 11-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AL543_00505 b1595074e966806de64d9a73a5339f6e 605 PRINTS PR00406 Cytochrome B5 reductase signature 365 379 1.0E-8 T 11-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AL543_00505 b1595074e966806de64d9a73a5339f6e 605 PRINTS PR00406 Cytochrome B5 reductase signature 388 407 1.0E-8 T 11-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AL543_00505 b1595074e966806de64d9a73a5339f6e 605 PRINTS PR00406 Cytochrome B5 reductase signature 328 335 1.0E-8 T 11-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AL543_00505 b1595074e966806de64d9a73a5339f6e 605 Pfam PF00175 Oxidoreductase NAD-binding domain 389 492 3.6E-19 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AL543_00505 b1595074e966806de64d9a73a5339f6e 605 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 530 597 1.0E-13 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL543_00505 b1595074e966806de64d9a73a5339f6e 605 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 555 563 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AL543_00505 b1595074e966806de64d9a73a5339f6e 605 Gene3D G3DSA:2.40.30.10 279 378 5.7E-23 T 11-10-2018 AL543_00505 b1595074e966806de64d9a73a5339f6e 605 Gene3D G3DSA:3.40.50.80 382 506 1.3E-33 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AL543_00505 b1595074e966806de64d9a73a5339f6e 605 Gene3D G3DSA:2.40.33.20 143 278 1.0E-5 T 11-10-2018 AL543_18380 729bc76dbd7d79b13ef71adbdf13208d 152 Gene3D G3DSA:3.10.450.50 1 152 2.5E-53 T 11-10-2018 AL543_18380 729bc76dbd7d79b13ef71adbdf13208d 152 SUPERFAMILY SSF54427 23 126 4.73E-31 T 11-10-2018 IPR032710 NTF2-like domain superfamily AL543_18380 729bc76dbd7d79b13ef71adbdf13208d 152 SUPERFAMILY SSF103642 132 152 4.25E-7 T 11-10-2018 AL543_18380 729bc76dbd7d79b13ef71adbdf13208d 152 Pfam PF02810 SEC-C motif 135 152 7.0E-9 T 11-10-2018 IPR004027 SEC-C motif AL543_13155 a72f46797b71317dbecb14bab4972e5a 402 SUPERFAMILY SSF53098 1 381 8.34E-67 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_13155 a72f46797b71317dbecb14bab4972e5a 402 Pfam PF01609 Transposase DDE domain 90 322 8.1E-24 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AL543_07810 ec8bc877369c3db2337dffb6a950aede 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 37.369 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_07810 ec8bc877369c3db2337dffb6a950aede 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 125 4.5E-57 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_07810 ec8bc877369c3db2337dffb6a950aede 136 SUPERFAMILY SSF54686 3 133 7.33E-53 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 AL543_07810 ec8bc877369c3db2337dffb6a950aede 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 11-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_07810 ec8bc877369c3db2337dffb6a950aede 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 8.3E-47 T 11-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 AL543_07810 ec8bc877369c3db2337dffb6a950aede 136 Gene3D G3DSA:3.90.1170.10 1 136 2.0E-54 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 AL543_07810 ec8bc877369c3db2337dffb6a950aede 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 4.5E-40 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_07810 ec8bc877369c3db2337dffb6a950aede 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 4.5E-40 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_07810 ec8bc877369c3db2337dffb6a950aede 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 4.5E-40 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_07810 ec8bc877369c3db2337dffb6a950aede 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 4.5E-40 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_06320 7a2bddd1a953f4ee1760ae3ecf61b90d 376 Gene3D G3DSA:3.40.50.150 8 181 3.6E-54 T 11-10-2018 AL543_06320 7a2bddd1a953f4ee1760ae3ecf61b90d 376 SUPERFAMILY SSF53335 197 351 4.03E-24 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL543_06320 7a2bddd1a953f4ee1760ae3ecf61b90d 376 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 2 375 49.313 T 11-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 AL543_06320 7a2bddd1a953f4ee1760ae3ecf61b90d 376 Gene3D G3DSA:3.40.50.150 186 376 7.2E-44 T 11-10-2018 AL543_06320 7a2bddd1a953f4ee1760ae3ecf61b90d 376 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 302 308 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AL543_06320 7a2bddd1a953f4ee1760ae3ecf61b90d 376 Pfam PF05175 Methyltransferase small domain 200 372 2.7E-51 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 AL543_06320 7a2bddd1a953f4ee1760ae3ecf61b90d 376 PIRSF PIRSF037565 1 376 2.5E-171 T 11-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 AL543_15165 df31cd8f6a57b0be21a201bf824c7c1a 396 Gene3D G3DSA:3.40.50.1100 9 204 3.1E-182 T 11-10-2018 AL543_15165 df31cd8f6a57b0be21a201bf824c7c1a 396 PIRSF PIRSF001413 1 395 1.2E-166 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL543_15165 df31cd8f6a57b0be21a201bf824c7c1a 396 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 79 93 - T 11-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL543_15165 df31cd8f6a57b0be21a201bf824c7c1a 396 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 51 376 5.8E-48 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AL543_15165 df31cd8f6a57b0be21a201bf824c7c1a 396 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 390 49.479 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL543_15165 df31cd8f6a57b0be21a201bf824c7c1a 396 SUPERFAMILY SSF53686 5 388 7.33E-140 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL543_15165 df31cd8f6a57b0be21a201bf824c7c1a 396 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 6 389 3.9E-196 T 11-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL543_15165 df31cd8f6a57b0be21a201bf824c7c1a 396 Gene3D G3DSA:3.40.50.1100 53 383 3.1E-182 T 11-10-2018 AL543_15560 2b2f7bf1f89ce9925fd696bc72303eea 415 Pfam PF00994 Probable molybdopterin binding domain 8 173 2.6E-30 T 11-10-2018 IPR001453 MoaB/Mog domain AL543_15560 2b2f7bf1f89ce9925fd696bc72303eea 415 SUPERFAMILY SSF53218 4 207 7.72E-37 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily AL543_15560 2b2f7bf1f89ce9925fd696bc72303eea 415 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 5 168 1.6E-26 T 11-10-2018 IPR001453 MoaB/Mog domain AL543_15560 2b2f7bf1f89ce9925fd696bc72303eea 415 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 415 109.285 T 11-10-2018 IPR008135 Competence-induced protein CinA AL543_15560 2b2f7bf1f89ce9925fd696bc72303eea 415 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 4 364 1.1E-86 T 11-10-2018 IPR008135 Competence-induced protein CinA AL543_15560 2b2f7bf1f89ce9925fd696bc72303eea 415 PIRSF PIRSF006728 4 395 8.9E-120 T 11-10-2018 IPR008135 Competence-induced protein CinA AL543_15560 2b2f7bf1f89ce9925fd696bc72303eea 415 Gene3D G3DSA:3.40.980.10 4 175 1.2E-47 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily AL543_15560 2b2f7bf1f89ce9925fd696bc72303eea 415 SMART SM00852 8 175 3.7E-34 T 11-10-2018 IPR001453 MoaB/Mog domain AL543_18560 5fd1e8511d21b968ecac8cdcd1c0ef57 228 SMART SM00382 33 221 6.7E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_18560 5fd1e8511d21b968ecac8cdcd1c0ef57 228 Pfam PF00005 ABC transporter 24 172 2.0E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_18560 5fd1e8511d21b968ecac8cdcd1c0ef57 228 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_18560 5fd1e8511d21b968ecac8cdcd1c0ef57 228 Gene3D G3DSA:3.40.50.300 1 227 1.2E-65 T 11-10-2018 AL543_18560 5fd1e8511d21b968ecac8cdcd1c0ef57 228 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 4 223 4.3E-109 T 11-10-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0016020|GO:0044873 AL543_18560 5fd1e8511d21b968ecac8cdcd1c0ef57 228 SUPERFAMILY SSF52540 4 225 4.54E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_07535 25d7f0a3852db2e385ee624c22e53979 92 SUPERFAMILY SSF55594 5 91 4.97E-25 T 11-10-2018 IPR035895 HPr-like superfamily AL543_07535 25d7f0a3852db2e385ee624c22e53979 92 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 15 22 - T 11-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AL543_07535 25d7f0a3852db2e385ee624c22e53979 92 Gene3D G3DSA:3.30.1340.10 3 86 2.5E-28 T 11-10-2018 IPR035895 HPr-like superfamily AL543_07535 25d7f0a3852db2e385ee624c22e53979 92 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 42 57 - T 11-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site AL543_07535 25d7f0a3852db2e385ee624c22e53979 92 Pfam PF00381 PTS HPr component phosphorylation site 5 85 5.3E-24 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AL543_07535 25d7f0a3852db2e385ee624c22e53979 92 PRINTS PR00107 Phosphocarrier protein signature 15 31 6.1E-12 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AL543_07535 25d7f0a3852db2e385ee624c22e53979 92 PRINTS PR00107 Phosphocarrier protein signature 41 56 6.1E-12 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AL543_07535 25d7f0a3852db2e385ee624c22e53979 92 PRINTS PR00107 Phosphocarrier protein signature 56 73 6.1E-12 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AL543_07535 25d7f0a3852db2e385ee624c22e53979 92 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 4 85 4.2E-23 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AL543_05705 a726437837490878b8bcbf3bd1a8e95b 263 Pfam PF01614 Bacterial transcriptional regulator 126 251 2.7E-40 T 11-10-2018 IPR014757 Transcription regulator IclR, C-terminal AL543_05705 a726437837490878b8bcbf3bd1a8e95b 263 SUPERFAMILY SSF55781 74 255 7.19E-51 T 11-10-2018 AL543_05705 a726437837490878b8bcbf3bd1a8e95b 263 SMART SM00346 10 99 8.4E-30 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL543_05705 a726437837490878b8bcbf3bd1a8e95b 263 Pfam PF09339 IclR helix-turn-helix domain 12 62 1.2E-14 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL543_05705 a726437837490878b8bcbf3bd1a8e95b 263 Gene3D G3DSA:3.30.450.40 84 261 5.3E-60 T 11-10-2018 IPR029016 GAF-like domain superfamily AL543_05705 a726437837490878b8bcbf3bd1a8e95b 263 SUPERFAMILY SSF46785 10 82 4.69E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_05705 a726437837490878b8bcbf3bd1a8e95b 263 Gene3D G3DSA:1.10.10.10 8 83 2.6E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_16080 8f37554d2be5399510d68e1b2b2df030 378 Pfam PF04209 homogentisate 1,2-dioxygenase 55 375 3.6E-23 T 11-10-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 AL543_16080 8f37554d2be5399510d68e1b2b2df030 378 SUPERFAMILY SSF51182 69 376 1.34E-90 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AL543_16080 8f37554d2be5399510d68e1b2b2df030 378 Gene3D G3DSA:2.60.120.10 70 167 4.7E-12 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL543_12360 ce428bb49f468f8b39963213d77ee489 709 SUPERFAMILY SSF55666 451 550 2.24E-27 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL543_12360 ce428bb49f468f8b39963213d77ee489 709 Pfam PF03725 3' exoribonuclease family, domain 2 148 211 1.0E-14 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL543_12360 ce428bb49f468f8b39963213d77ee489 709 SUPERFAMILY SSF54211 293 489 1.77E-47 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL543_12360 ce428bb49f468f8b39963213d77ee489 709 Gene3D G3DSA:3.30.230.70 234 550 5.0E-115 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL543_12360 ce428bb49f468f8b39963213d77ee489 709 Gene3D G3DSA:3.30.1370.10 551 622 4.1E-19 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 AL543_12360 ce428bb49f468f8b39963213d77ee489 709 SUPERFAMILY SSF54791 555 623 1.52E-16 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 AL543_12360 ce428bb49f468f8b39963213d77ee489 709 PIRSF PIRSF005499 2 709 3.8E-298 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AL543_12360 ce428bb49f468f8b39963213d77ee489 709 Pfam PF00575 S1 RNA binding domain 620 691 1.5E-18 T 11-10-2018 IPR003029 S1 domain GO:0003676 AL543_12360 ce428bb49f468f8b39963213d77ee489 709 SUPERFAMILY SSF54211 5 145 1.27E-48 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL543_12360 ce428bb49f468f8b39963213d77ee489 709 Gene3D G3DSA:2.40.50.140 623 694 2.6E-29 T 11-10-2018 AL543_12360 ce428bb49f468f8b39963213d77ee489 709 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 4 694 30.23 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AL543_12360 ce428bb49f468f8b39963213d77ee489 709 Pfam PF00013 KH domain 558 615 2.6E-9 T 11-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 AL543_12360 ce428bb49f468f8b39963213d77ee489 709 SUPERFAMILY SSF50249 608 693 3.43E-21 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL543_12360 ce428bb49f468f8b39963213d77ee489 709 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 11 692 0.0 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AL543_12360 ce428bb49f468f8b39963213d77ee489 709 SMART SM00316 621 691 1.8E-25 T 11-10-2018 IPR022967 RNA-binding domain, S1 AL543_12360 ce428bb49f468f8b39963213d77ee489 709 SMART SM00322 553 618 1.2E-11 T 11-10-2018 IPR004087 K Homology domain GO:0003676 AL543_12360 ce428bb49f468f8b39963213d77ee489 709 Pfam PF01138 3' exoribonuclease family, domain 1 325 457 1.3E-20 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL543_12360 ce428bb49f468f8b39963213d77ee489 709 Pfam PF01138 3' exoribonuclease family, domain 1 17 145 2.9E-16 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL543_12360 ce428bb49f468f8b39963213d77ee489 709 Gene3D G3DSA:3.30.230.70 2 229 3.3E-76 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL543_12360 ce428bb49f468f8b39963213d77ee489 709 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 242 321 3.4E-25 T 11-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AL543_12360 ce428bb49f468f8b39963213d77ee489 709 SUPERFAMILY SSF55666 146 236 4.91E-29 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL543_07530 044a9eed0f86158b9af42f29da16ee02 286 PIRSF PIRSF005052 1 286 7.4E-107 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 AL543_07530 044a9eed0f86158b9af42f29da16ee02 286 SUPERFAMILY SSF52540 1 152 2.1E-12 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_07530 044a9eed0f86158b9af42f29da16ee02 286 Pfam PF03668 P-loop ATPase protein family 1 283 2.2E-110 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 AL543_07530 044a9eed0f86158b9af42f29da16ee02 286 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 283 41.17 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 AL543_16215 abf4281ce41330ed5c35312f8bb9b8a2 945 Gene3D G3DSA:3.30.420.40 217 268 1.1E-32 T 11-10-2018 AL543_16215 abf4281ce41330ed5c35312f8bb9b8a2 945 Pfam PF12531 DNA-K related protein 695 942 1.5E-100 T 11-10-2018 IPR021030 Protein of unknown function DUF3731 AL543_16215 abf4281ce41330ed5c35312f8bb9b8a2 945 PRINTS PR00301 70kDa heat shock protein signature 12 25 1.5E-7 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL543_16215 abf4281ce41330ed5c35312f8bb9b8a2 945 PRINTS PR00301 70kDa heat shock protein signature 238 248 1.5E-7 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL543_16215 abf4281ce41330ed5c35312f8bb9b8a2 945 PRINTS PR00301 70kDa heat shock protein signature 171 191 1.5E-7 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL543_16215 abf4281ce41330ed5c35312f8bb9b8a2 945 SUPERFAMILY SSF53067 229 463 2.59E-19 T 11-10-2018 AL543_16215 abf4281ce41330ed5c35312f8bb9b8a2 945 Pfam PF00012 Hsp70 protein 138 320 2.9E-14 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL543_16215 abf4281ce41330ed5c35312f8bb9b8a2 945 SUPERFAMILY SSF53067 12 216 3.7E-32 T 11-10-2018 AL543_16215 abf4281ce41330ed5c35312f8bb9b8a2 945 Gene3D G3DSA:3.30.420.40 14 216 1.1E-32 T 11-10-2018 AL543_16215 abf4281ce41330ed5c35312f8bb9b8a2 945 Gene3D G3DSA:3.90.640.10 269 327 1.1E-32 T 11-10-2018 AL543_18770 93ad316af4ba044b1511f5f781d93255 355 Pfam PF00534 Glycosyl transferases group 1 186 306 2.3E-18 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AL543_18770 93ad316af4ba044b1511f5f781d93255 355 Pfam PF13579 Glycosyl transferase 4-like domain 29 168 5.4E-16 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AL543_18770 93ad316af4ba044b1511f5f781d93255 355 Gene3D G3DSA:3.40.50.2000 28 351 3.8E-43 T 11-10-2018 AL543_18770 93ad316af4ba044b1511f5f781d93255 355 Gene3D G3DSA:3.40.50.2000 180 338 3.8E-43 T 11-10-2018 AL543_18770 93ad316af4ba044b1511f5f781d93255 355 SUPERFAMILY SSF53756 24 353 9.94E-55 T 11-10-2018 AL543_08445 d728dd45d2badee12c9bcedd9a486490 195 Gene3D G3DSA:3.30.300.130 104 192 4.9E-19 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily AL543_08445 d728dd45d2badee12c9bcedd9a486490 195 Gene3D G3DSA:2.60.300.12 4 101 5.2E-14 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AL543_08445 d728dd45d2badee12c9bcedd9a486490 195 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 4 195 44.566 T 11-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 AL543_08445 d728dd45d2badee12c9bcedd9a486490 195 SUPERFAMILY SSF89360 4 100 3.92E-22 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AL543_08445 d728dd45d2badee12c9bcedd9a486490 195 Pfam PF01106 NifU-like domain 114 179 4.7E-19 T 11-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 AL543_08445 d728dd45d2badee12c9bcedd9a486490 195 Pfam PF01521 Iron-sulphur cluster biosynthesis 5 102 2.2E-12 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AL543_08445 d728dd45d2badee12c9bcedd9a486490 195 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 122 181 2.0E-28 T 11-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 AL543_08445 d728dd45d2badee12c9bcedd9a486490 195 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 5 195 3.0E-95 T 11-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 AL543_08445 d728dd45d2badee12c9bcedd9a486490 195 SUPERFAMILY SSF117916 98 187 1.18E-22 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily AL543_12095 289de2ffe89d1276c3ac882f1d0e7535 457 SUPERFAMILY SSF81301 23 180 4.8E-40 T 11-10-2018 AL543_12095 289de2ffe89d1276c3ac882f1d0e7535 457 Gene3D G3DSA:3.30.460.10 18 179 5.4E-63 T 11-10-2018 AL543_12095 289de2ffe89d1276c3ac882f1d0e7535 457 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 210 271 3.0E-20 T 11-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AL543_12095 289de2ffe89d1276c3ac882f1d0e7535 457 Gene3D G3DSA:1.10.3090.10 181 431 9.7E-89 T 11-10-2018 AL543_12095 289de2ffe89d1276c3ac882f1d0e7535 457 Pfam PF01743 Poly A polymerase head domain 52 183 1.3E-38 T 11-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AL543_12095 289de2ffe89d1276c3ac882f1d0e7535 457 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 7 448 37.571 T 11-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 AL543_12095 289de2ffe89d1276c3ac882f1d0e7535 457 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 21 452 1.7E-158 T 11-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 AL543_12095 289de2ffe89d1276c3ac882f1d0e7535 457 Pfam PF12626 Polymerase A arginine-rich C-terminus 329 447 2.0E-37 T 11-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain AL543_12095 289de2ffe89d1276c3ac882f1d0e7535 457 SUPERFAMILY SSF81891 181 393 5.76E-47 T 11-10-2018 AL543_08050 b11005326c9468addc01c186ab48fde5 484 SUPERFAMILY SSF55424 349 467 1.25E-24 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AL543_08050 b11005326c9468addc01c186ab48fde5 484 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 135 153 5.6E-20 T 11-10-2018 AL543_08050 b11005326c9468addc01c186ab48fde5 484 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 5.6E-20 T 11-10-2018 AL543_08050 b11005326c9468addc01c186ab48fde5 484 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 292 314 5.6E-20 T 11-10-2018 AL543_08050 b11005326c9468addc01c186ab48fde5 484 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 5.6E-20 T 11-10-2018 AL543_08050 b11005326c9468addc01c186ab48fde5 484 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 174 192 5.6E-20 T 11-10-2018 AL543_08050 b11005326c9468addc01c186ab48fde5 484 Gene3D G3DSA:3.50.50.60 147 269 4.3E-97 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_08050 b11005326c9468addc01c186ab48fde5 484 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 327 7.7E-44 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL543_08050 b11005326c9468addc01c186ab48fde5 484 Gene3D G3DSA:3.50.50.60 7 330 4.3E-97 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_08050 b11005326c9468addc01c186ab48fde5 484 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 138 147 6.5E-40 T 11-10-2018 AL543_08050 b11005326c9468addc01c186ab48fde5 484 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 174 199 6.5E-40 T 11-10-2018 AL543_08050 b11005326c9468addc01c186ab48fde5 484 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 344 365 6.5E-40 T 11-10-2018 AL543_08050 b11005326c9468addc01c186ab48fde5 484 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 307 314 6.5E-40 T 11-10-2018 AL543_08050 b11005326c9468addc01c186ab48fde5 484 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 434 454 6.5E-40 T 11-10-2018 AL543_08050 b11005326c9468addc01c186ab48fde5 484 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 6.5E-40 T 11-10-2018 AL543_08050 b11005326c9468addc01c186ab48fde5 484 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 412 427 6.5E-40 T 11-10-2018 AL543_08050 b11005326c9468addc01c186ab48fde5 484 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 6.5E-40 T 11-10-2018 AL543_08050 b11005326c9468addc01c186ab48fde5 484 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 6.5E-40 T 11-10-2018 AL543_08050 b11005326c9468addc01c186ab48fde5 484 SUPERFAMILY SSF51905 1 367 2.54E-45 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_08050 b11005326c9468addc01c186ab48fde5 484 Gene3D G3DSA:1.10.287.990 37 107 4.3E-97 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL543_08050 b11005326c9468addc01c186ab48fde5 484 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 351 459 1.9E-16 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AL543_08050 b11005326c9468addc01c186ab48fde5 484 PIRSF PIRSF000350 1 467 7.2E-61 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 AL543_08050 b11005326c9468addc01c186ab48fde5 484 Gene3D G3DSA:3.30.390.30 347 470 2.2E-41 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AL543_19920 350ea643a192dfd71a1faee58172d0cb 136 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 54 128 3.2E-33 T 11-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 AL543_19920 350ea643a192dfd71a1faee58172d0cb 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 73 89 1.1E-27 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AL543_19920 350ea643a192dfd71a1faee58172d0cb 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 56 72 1.1E-27 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AL543_19920 350ea643a192dfd71a1faee58172d0cb 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 102 117 1.1E-27 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AL543_19920 350ea643a192dfd71a1faee58172d0cb 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 89 102 1.1E-27 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AL543_19920 350ea643a192dfd71a1faee58172d0cb 136 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 56 126 1.8E-24 T 11-10-2018 IPR001543 Surface presentation of antigen (SpoA) AL543_19920 350ea643a192dfd71a1faee58172d0cb 136 Gene3D G3DSA:2.30.330.10 46 136 2.0E-33 T 11-10-2018 IPR036429 SpoA-like superfamily AL543_19920 350ea643a192dfd71a1faee58172d0cb 136 SUPERFAMILY SSF101801 54 134 6.02E-25 T 11-10-2018 IPR036429 SpoA-like superfamily AL543_12345 e6d1e011e12cf299dc075eece1e9bc3e 132 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 98 1.0E-46 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 AL543_12345 e6d1e011e12cf299dc075eece1e9bc3e 132 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 6 111 26.491 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 AL543_12345 e6d1e011e12cf299dc075eece1e9bc3e 132 Gene3D G3DSA:3.30.300.20 1 106 4.8E-35 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AL543_12345 e6d1e011e12cf299dc075eece1e9bc3e 132 Pfam PF02033 Ribosome-binding factor A 7 110 2.0E-30 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 AL543_12345 e6d1e011e12cf299dc075eece1e9bc3e 132 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 3 115 1.3E-34 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 AL543_12345 e6d1e011e12cf299dc075eece1e9bc3e 132 SUPERFAMILY SSF89919 2 105 9.68E-32 T 11-10-2018 IPR023799 Ribosome-binding factor A domain superfamily AL543_12345 e6d1e011e12cf299dc075eece1e9bc3e 132 ProSitePatterns PS01319 Ribosome-binding factor A signature. 77 98 - T 11-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 AL543_07430 96f91f7ae90afe74cd5ea70580b7a6d7 155 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 97 2.1E-30 T 11-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal AL543_07430 96f91f7ae90afe74cd5ea70580b7a6d7 155 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 2.0E-46 T 11-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal AL543_07430 96f91f7ae90afe74cd5ea70580b7a6d7 155 SUPERFAMILY SSF57825 101 152 2.35E-15 T 11-10-2018 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily AL543_07430 96f91f7ae90afe74cd5ea70580b7a6d7 155 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 150 2.2E-62 T 11-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 AL543_07430 96f91f7ae90afe74cd5ea70580b7a6d7 155 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 102 149 1.4E-18 T 11-10-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal AL543_07430 96f91f7ae90afe74cd5ea70580b7a6d7 155 SUPERFAMILY SSF54893 2 100 1.7E-35 T 11-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily AL543_07430 96f91f7ae90afe74cd5ea70580b7a6d7 155 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 33.475 T 11-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 AL543_07430 96f91f7ae90afe74cd5ea70580b7a6d7 155 Gene3D G3DSA:2.30.30.20 101 153 2.9E-25 T 11-10-2018 AL543_07430 96f91f7ae90afe74cd5ea70580b7a6d7 155 Gene3D G3DSA:3.30.70.140 1 100 1.3E-36 T 11-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily AL543_18555 8bd3f71c9a52014881d60f31792ca0f1 414 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 413 7.1E-155 T 11-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 AL543_18555 8bd3f71c9a52014881d60f31792ca0f1 414 Pfam PF02687 FtsX-like permease family 301 407 1.8E-12 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AL543_18555 8bd3f71c9a52014881d60f31792ca0f1 414 Pfam PF12704 MacB-like periplasmic core domain 30 241 3.7E-13 T 11-10-2018 IPR025857 MacB-like periplasmic core domain AL543_18555 8bd3f71c9a52014881d60f31792ca0f1 414 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 4 414 3.2E-207 T 11-10-2018 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0016021|GO:0042953|GO:0042954|GO:0044874 AL543_11490 cf29d45c8378bb07adcbf8c19f549edc 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 2.0E-39 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AL543_11490 cf29d45c8378bb07adcbf8c19f549edc 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 1.3E-42 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AL543_11490 cf29d45c8378bb07adcbf8c19f549edc 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.42 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AL543_11490 cf29d45c8378bb07adcbf8c19f549edc 90 SUPERFAMILY SSF111148 1 89 1.83E-41 T 11-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 AL543_11490 cf29d45c8378bb07adcbf8c19f549edc 90 Gene3D G3DSA:1.10.3880.10 1 90 3.7E-40 T 11-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 AL543_11490 cf29d45c8378bb07adcbf8c19f549edc 90 PIRSF PIRSF029827 1 90 1.3E-43 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AL543_05765 8dcd9a02747cc7444c6f76f689bfed82 727 Gene3D G3DSA:3.40.50.880 441 671 2.4E-74 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL543_05765 8dcd9a02747cc7444c6f76f689bfed82 727 TIGRFAM TIGR02336 TIGR02336: 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase 6 727 0.0 T 11-10-2018 IPR012711 Lacto-N-biose phosphorylase/D-galactosyl-beta-1->4-L-rhamnose phosphorylase GO:0004645 AL543_05765 8dcd9a02747cc7444c6f76f689bfed82 727 Pfam PF17385 Lacto-N-biose phosphorylase central domain 444 668 1.1E-75 T 11-10-2018 IPR035363 Lacto-N-biose phosphorylase, central domain AL543_05765 8dcd9a02747cc7444c6f76f689bfed82 727 Pfam PF17386 Lacto-N-biose phosphorylase C-terminal domain 674 726 3.6E-12 T 11-10-2018 IPR035356 Lacto-N-biose phosphorylase, C-terminal domain AL543_05765 8dcd9a02747cc7444c6f76f689bfed82 727 SUPERFAMILY SSF52317 480 665 3.2E-20 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL543_05765 8dcd9a02747cc7444c6f76f689bfed82 727 Pfam PF09508 Lacto-N-biose phosphorylase N-terminal TIM barrel domain 9 439 1.7E-180 T 11-10-2018 IPR035080 Lacto-N-biose phosphorylase-like, N-terminal TIM barrel domain AL543_05765 8dcd9a02747cc7444c6f76f689bfed82 727 Gene3D G3DSA:2.60.40.10 76 180 8.3E-186 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL543_05765 8dcd9a02747cc7444c6f76f689bfed82 727 Gene3D G3DSA:3.20.20.80 9 432 8.3E-186 T 11-10-2018 AL543_08120 bdc7722cdbcac02c6a81f580c45f98e0 602 Pfam PF00890 FAD binding domain 7 397 1.1E-112 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL543_08120 bdc7722cdbcac02c6a81f580c45f98e0 602 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 581 1.5E-37 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL543_08120 bdc7722cdbcac02c6a81f580c45f98e0 602 Gene3D G3DSA:3.90.700.10 237 363 1.3E-160 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL543_08120 bdc7722cdbcac02c6a81f580c45f98e0 602 PIRSF PIRSF000171 1 571 2.1E-44 T 11-10-2018 AL543_08120 bdc7722cdbcac02c6a81f580c45f98e0 602 Gene3D G3DSA:3.50.50.60 7 409 1.3E-160 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_08120 bdc7722cdbcac02c6a81f580c45f98e0 602 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 5.8E-9 T 11-10-2018 AL543_08120 bdc7722cdbcac02c6a81f580c45f98e0 602 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 5.8E-9 T 11-10-2018 AL543_08120 bdc7722cdbcac02c6a81f580c45f98e0 602 Gene3D G3DSA:1.20.58.100 424 538 7.8E-35 T 11-10-2018 AL543_08120 bdc7722cdbcac02c6a81f580c45f98e0 602 SUPERFAMILY SSF51905 3 431 3.34E-72 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_08120 bdc7722cdbcac02c6a81f580c45f98e0 602 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 581 5.8E-236 T 11-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL543_08120 bdc7722cdbcac02c6a81f580c45f98e0 602 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 3 582 0.0 T 11-10-2018 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 AL543_08120 bdc7722cdbcac02c6a81f580c45f98e0 602 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 11-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL543_08120 bdc7722cdbcac02c6a81f580c45f98e0 602 Gene3D G3DSA:4.10.80.40 543 577 5.1E-12 T 11-10-2018 AL543_08120 bdc7722cdbcac02c6a81f580c45f98e0 602 SUPERFAMILY SSF46977 444 581 4.32E-43 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL543_08120 bdc7722cdbcac02c6a81f580c45f98e0 602 SUPERFAMILY SSF56425 227 358 3.74E-41 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL543_08120 bdc7722cdbcac02c6a81f580c45f98e0 602 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 8.4E-5 T 11-10-2018 AL543_08120 bdc7722cdbcac02c6a81f580c45f98e0 602 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 375 382 8.4E-5 T 11-10-2018 AL543_13055 adf0656ce03659ceedeb143c82e24898 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 7.3E-7 T 11-10-2018 AL543_13055 adf0656ce03659ceedeb143c82e24898 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 7.3E-7 T 11-10-2018 AL543_13055 adf0656ce03659ceedeb143c82e24898 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 7.3E-7 T 11-10-2018 AL543_13055 adf0656ce03659ceedeb143c82e24898 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 1.3E-7 T 11-10-2018 AL543_13055 adf0656ce03659ceedeb143c82e24898 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 1.3E-7 T 11-10-2018 AL543_13055 adf0656ce03659ceedeb143c82e24898 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 1.3E-7 T 11-10-2018 AL543_13055 adf0656ce03659ceedeb143c82e24898 517 Pfam PF02540 NAD synthase 211 285 1.1E-7 T 11-10-2018 IPR022310 NAD/GMP synthase AL543_13055 adf0656ce03659ceedeb143c82e24898 517 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 517 56.411 T 11-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 AL543_13055 adf0656ce03659ceedeb143c82e24898 517 Gene3D G3DSA:3.30.300.10 398 517 3.3E-51 T 11-10-2018 AL543_13055 adf0656ce03659ceedeb143c82e24898 517 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 205 517 1.3E-155 T 11-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AL543_13055 adf0656ce03659ceedeb143c82e24898 517 SUPERFAMILY SSF52402 189 412 5.07E-58 T 11-10-2018 AL543_13055 adf0656ce03659ceedeb143c82e24898 517 Gene3D G3DSA:3.40.50.620 202 397 1.4E-75 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL543_13055 adf0656ce03659ceedeb143c82e24898 517 SUPERFAMILY SSF52317 9 200 5.66E-57 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL543_13055 adf0656ce03659ceedeb143c82e24898 517 PRINTS PR00097 Anthranilate synthase component II signature 54 63 3.8E-6 T 11-10-2018 AL543_13055 adf0656ce03659ceedeb143c82e24898 517 PRINTS PR00097 Anthranilate synthase component II signature 81 92 3.8E-6 T 11-10-2018 AL543_13055 adf0656ce03659ceedeb143c82e24898 517 PRINTS PR00097 Anthranilate synthase component II signature 169 182 3.8E-6 T 11-10-2018 AL543_13055 adf0656ce03659ceedeb143c82e24898 517 Gene3D G3DSA:3.40.50.880 6 201 1.5E-54 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL543_13055 adf0656ce03659ceedeb143c82e24898 517 Pfam PF00117 Glutamine amidotransferase class-I 12 191 1.6E-41 T 11-10-2018 IPR017926 Glutamine amidotransferase AL543_13055 adf0656ce03659ceedeb143c82e24898 517 Pfam PF00958 GMP synthase C terminal domain 425 516 1.0E-43 T 11-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AL543_13055 adf0656ce03659ceedeb143c82e24898 517 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 197 1.2E-83 T 11-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AL543_13055 adf0656ce03659ceedeb143c82e24898 517 SUPERFAMILY SSF54810 397 517 5.1E-51 T 11-10-2018 AL543_00825 b942de2d9ef3b4f23e282282beea539a 225 Gene3D G3DSA:3.60.40.10 2 190 4.1E-29 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AL543_00825 b942de2d9ef3b4f23e282282beea539a 225 SMART SM00331 2 192 0.0038 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AL543_00825 b942de2d9ef3b4f23e282282beea539a 225 SUPERFAMILY SSF81606 1 189 1.57E-8 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AL543_00825 b942de2d9ef3b4f23e282282beea539a 225 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 28 168 1.9E-6 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AL543_05635 283a469141a3d2bf42a207d6dd769034 117 PRINTS PR00062 Ribosomal protein L20 signature 42 71 2.4E-42 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_05635 283a469141a3d2bf42a207d6dd769034 117 PRINTS PR00062 Ribosomal protein L20 signature 12 41 2.4E-42 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_05635 283a469141a3d2bf42a207d6dd769034 117 PRINTS PR00062 Ribosomal protein L20 signature 75 101 2.4E-42 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_05635 283a469141a3d2bf42a207d6dd769034 117 Gene3D G3DSA:1.10.1900.20 56 117 7.9E-29 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_05635 283a469141a3d2bf42a207d6dd769034 117 SUPERFAMILY SSF74731 2 116 1.7E-50 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_05635 283a469141a3d2bf42a207d6dd769034 117 Gene3D G3DSA:1.10.720.90 2 55 4.2E-25 T 11-10-2018 AL543_05635 283a469141a3d2bf42a207d6dd769034 117 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 7.0E-22 T 11-10-2018 AL543_05635 283a469141a3d2bf42a207d6dd769034 117 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.787 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_05635 283a469141a3d2bf42a207d6dd769034 117 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_05635 283a469141a3d2bf42a207d6dd769034 117 Pfam PF00453 Ribosomal protein L20 3 108 4.3E-49 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_05635 283a469141a3d2bf42a207d6dd769034 117 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.5E-52 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_20420 51a252b1d3bd61631d521e2f55a402a7 883 Gene3D G3DSA:3.20.20.80 330 817 1.5E-164 T 11-10-2018 AL543_20420 51a252b1d3bd61631d521e2f55a402a7 883 SUPERFAMILY SSF81296 780 881 6.72E-39 T 11-10-2018 IPR014756 Immunoglobulin E-set AL543_20420 51a252b1d3bd61631d521e2f55a402a7 883 Pfam PF03174 Chitobiase/beta-hexosaminidase C-terminal domain 804 879 8.2E-30 T 11-10-2018 IPR004867 Chitobiase C-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 AL543_20420 51a252b1d3bd61631d521e2f55a402a7 883 Pfam PF03173 Putative carbohydrate binding domain 35 193 8.2E-62 T 11-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 AL543_20420 51a252b1d3bd61631d521e2f55a402a7 883 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 211 329 1.9E-17 T 11-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal AL543_20420 51a252b1d3bd61631d521e2f55a402a7 883 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 332 764 8.4E-109 T 11-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 AL543_20420 51a252b1d3bd61631d521e2f55a402a7 883 Gene3D G3DSA:3.30.379.10 204 329 5.7E-25 T 11-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 AL543_20420 51a252b1d3bd61631d521e2f55a402a7 883 SUPERFAMILY SSF55545 209 331 6.93E-25 T 11-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 AL543_20420 51a252b1d3bd61631d521e2f55a402a7 883 Gene3D G3DSA:2.60.40.10 818 882 7.8E-26 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL543_20420 51a252b1d3bd61631d521e2f55a402a7 883 Gene3D G3DSA:2.60.40.290 25 167 4.6E-55 T 11-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 AL543_20420 51a252b1d3bd61631d521e2f55a402a7 883 SMART SM01081 34 195 5.7E-88 T 11-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 AL543_20420 51a252b1d3bd61631d521e2f55a402a7 883 SUPERFAMILY SSF49384 26 198 9.63E-66 T 11-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 AL543_20420 51a252b1d3bd61631d521e2f55a402a7 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 355 376 1.5E-47 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL543_20420 51a252b1d3bd61631d521e2f55a402a7 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 526 539 1.5E-47 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL543_20420 51a252b1d3bd61631d521e2f55a402a7 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 728 744 1.5E-47 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL543_20420 51a252b1d3bd61631d521e2f55a402a7 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 746 763 1.5E-47 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL543_20420 51a252b1d3bd61631d521e2f55a402a7 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 292 312 1.5E-47 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL543_20420 51a252b1d3bd61631d521e2f55a402a7 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 499 517 1.5E-47 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL543_20420 51a252b1d3bd61631d521e2f55a402a7 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 326 343 1.5E-47 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL543_20420 51a252b1d3bd61631d521e2f55a402a7 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 432 449 1.5E-47 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL543_20420 51a252b1d3bd61631d521e2f55a402a7 883 SUPERFAMILY SSF51445 332 773 3.07E-142 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AL543_04200 a9bdc83d3a201f9f74bd2cff28b1ef3c 193 Gene3D G3DSA:1.10.357.10 74 188 1.6E-15 T 11-10-2018 AL543_04200 a9bdc83d3a201f9f74bd2cff28b1ef3c 193 Gene3D G3DSA:1.10.10.60 1 65 3.8E-22 T 11-10-2018 AL543_04200 a9bdc83d3a201f9f74bd2cff28b1ef3c 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 55 1.6E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL543_04200 a9bdc83d3a201f9f74bd2cff28b1ef3c 193 SUPERFAMILY SSF46689 2 65 3.95E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_04200 a9bdc83d3a201f9f74bd2cff28b1ef3c 193 SUPERFAMILY SSF48498 84 183 2.07E-16 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AL543_02605 819850f5903d5e5efd58f96f9284ee8d 340 PIRSF PIRSF018494 2 337 3.5E-125 T 11-10-2018 IPR030935 Phage portal protein PBSX family, Proteobacteria AL543_02605 819850f5903d5e5efd58f96f9284ee8d 340 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 49 326 7.0E-63 T 11-10-2018 IPR006430 Phage portal protein PBSX family AL543_15015 4d19af4c1ae45b4f4b8ef1c37af95356 76 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 4 71 1.4E-43 T 11-10-2018 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355 AL543_15015 4d19af4c1ae45b4f4b8ef1c37af95356 76 PIRSF PIRSF002599 1 75 7.5E-23 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 AL543_15015 4d19af4c1ae45b4f4b8ef1c37af95356 76 SUPERFAMILY SSF50249 2 70 9.43E-24 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL543_15015 4d19af4c1ae45b4f4b8ef1c37af95356 76 Pfam PF00313 'Cold-shock' DNA-binding domain 6 69 1.7E-27 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL543_15015 4d19af4c1ae45b4f4b8ef1c37af95356 76 PRINTS PR00050 Cold shock protein signature 28 37 1.2E-14 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL543_15015 4d19af4c1ae45b4f4b8ef1c37af95356 76 PRINTS PR00050 Cold shock protein signature 43 61 1.2E-14 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL543_15015 4d19af4c1ae45b4f4b8ef1c37af95356 76 PRINTS PR00050 Cold shock protein signature 7 22 1.2E-14 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL543_15015 4d19af4c1ae45b4f4b8ef1c37af95356 76 Gene3D G3DSA:2.40.50.140 4 68 1.1E-25 T 11-10-2018 AL543_15015 4d19af4c1ae45b4f4b8ef1c37af95356 76 SMART SM00357 6 70 4.2E-26 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 AL543_15015 4d19af4c1ae45b4f4b8ef1c37af95356 76 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 11-10-2018 IPR019844 Cold-shock conserved site AL543_11320 ca9c96b435ec14583f5e0162ac32a197 345 Gene3D G3DSA:2.130.10.10 6 344 7.6E-90 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AL543_11320 ca9c96b435ec14583f5e0162ac32a197 345 Pfam PF10282 Lactonase, 7-bladed beta-propeller 8 339 8.6E-98 T 11-10-2018 IPR019405 Lactonase, 7-bladed beta propeller AL543_11320 ca9c96b435ec14583f5e0162ac32a197 345 SUPERFAMILY SSF51004 30 327 7.72E-30 T 11-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily AL543_13795 ece9b549874538186bde4d6a9a6d60e5 393 SMART SM00710 197 227 2800.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat AL543_13795 ece9b549874538186bde4d6a9a6d60e5 393 SMART SM00710 102 133 3600.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat AL543_13795 ece9b549874538186bde4d6a9a6d60e5 393 SMART SM00710 243 265 4500.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat AL543_13795 ece9b549874538186bde4d6a9a6d60e5 393 SMART SM00710 307 352 5700.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat AL543_13795 ece9b549874538186bde4d6a9a6d60e5 393 SMART SM00710 275 296 450.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat AL543_13795 ece9b549874538186bde4d6a9a6d60e5 393 SMART SM00710 167 187 5900.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat AL543_13795 ece9b549874538186bde4d6a9a6d60e5 393 SMART SM00710 134 156 1400.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat AL543_13795 ece9b549874538186bde4d6a9a6d60e5 393 SUPERFAMILY SSF51126 4 361 1.91E-35 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor AL543_13795 ece9b549874538186bde4d6a9a6d60e5 393 Gene3D G3DSA:2.160.20.10 22 393 3.7E-27 T 11-10-2018 IPR012334 Pectin lyase fold AL543_13795 ece9b549874538186bde4d6a9a6d60e5 393 Pfam PF12708 Pectate lyase superfamily protein 23 97 4.2E-7 T 11-10-2018 IPR024535 Pectate lyase superfamily protein AL543_13795 ece9b549874538186bde4d6a9a6d60e5 393 Pfam PF13229 Right handed beta helix region 128 292 1.0E-5 T 11-10-2018 IPR039448 Right handed beta helix domain AL543_10135 f9be5ae0ef17b04c1055ec463ac8ae47 162 Pfam PF03350 Uncharacterized protein family, UPF0114 9 125 1.1E-33 T 11-10-2018 IPR005134 Uncharacterised protein family UPF0114 AL543_10135 f9be5ae0ef17b04c1055ec463ac8ae47 162 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 1 160 2.7E-67 T 11-10-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria AL543_10135 f9be5ae0ef17b04c1055ec463ac8ae47 162 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 162 85.753 T 11-10-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria AL543_00910 9e402ebee77683e6e183efe45ec7f854 384 PRINTS PR00084 Mannitol dehydrogenase signature 152 165 7.9E-18 T 11-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AL543_00910 9e402ebee77683e6e183efe45ec7f854 384 PRINTS PR00084 Mannitol dehydrogenase signature 116 129 7.9E-18 T 11-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AL543_00910 9e402ebee77683e6e183efe45ec7f854 384 PRINTS PR00084 Mannitol dehydrogenase signature 172 187 7.9E-18 T 11-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AL543_00910 9e402ebee77683e6e183efe45ec7f854 384 PRINTS PR00084 Mannitol dehydrogenase signature 5 15 7.9E-18 T 11-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AL543_00910 9e402ebee77683e6e183efe45ec7f854 384 SUPERFAMILY SSF48179 206 383 2.14E-44 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AL543_00910 9e402ebee77683e6e183efe45ec7f854 384 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 3 380 41.924 T 11-10-2018 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AL543_00910 9e402ebee77683e6e183efe45ec7f854 384 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 152 373 4.5E-58 T 11-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 AL543_00910 9e402ebee77683e6e183efe45ec7f854 384 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 4 125 3.9E-24 T 11-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 AL543_00910 9e402ebee77683e6e183efe45ec7f854 384 Gene3D G3DSA:3.40.50.720 3 207 5.5E-77 T 11-10-2018 AL543_00910 9e402ebee77683e6e183efe45ec7f854 384 SUPERFAMILY SSF51735 2 204 8.49E-43 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_00910 9e402ebee77683e6e183efe45ec7f854 384 Gene3D G3DSA:1.10.1040.10 209 384 2.9E-65 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL543_00910 9e402ebee77683e6e183efe45ec7f854 384 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 152 164 - T 11-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AL543_11010 76b4818e2293593fe7e5bb8fbd16f49d 616 SUPERFAMILY SSF52343 461 616 3.67E-52 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AL543_11010 76b4818e2293593fe7e5bb8fbd16f49d 616 Pfam PF00175 Oxidoreductase NAD-binding domain 474 580 6.9E-18 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AL543_11010 76b4818e2293593fe7e5bb8fbd16f49d 616 SUPERFAMILY SSF63380 246 462 2.84E-68 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AL543_11010 76b4818e2293593fe7e5bb8fbd16f49d 616 Gene3D G3DSA:1.20.990.10 297 401 2.8E-75 T 11-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 AL543_11010 76b4818e2293593fe7e5bb8fbd16f49d 616 PIRSF PIRSF000207 15 616 7.8E-267 T 11-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL543_11010 76b4818e2293593fe7e5bb8fbd16f49d 616 Pfam PF00258 Flavodoxin 83 211 1.1E-31 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AL543_11010 76b4818e2293593fe7e5bb8fbd16f49d 616 Gene3D G3DSA:3.40.50.360 75 233 1.2E-48 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL543_11010 76b4818e2293593fe7e5bb8fbd16f49d 616 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 22 616 3.4E-256 T 11-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL543_11010 76b4818e2293593fe7e5bb8fbd16f49d 616 Gene3D G3DSA:3.40.50.80 462 616 6.5E-60 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AL543_11010 76b4818e2293593fe7e5bb8fbd16f49d 616 Pfam PF00667 FAD binding domain 249 441 5.0E-33 T 11-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 AL543_11010 76b4818e2293593fe7e5bb8fbd16f49d 616 SUPERFAMILY SSF52218 80 226 3.28E-47 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL543_11010 76b4818e2293593fe7e5bb8fbd16f49d 616 PRINTS PR00369 Flavodoxin signature 130 141 5.9E-14 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AL543_11010 76b4818e2293593fe7e5bb8fbd16f49d 616 PRINTS PR00369 Flavodoxin signature 162 172 5.9E-14 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AL543_11010 76b4818e2293593fe7e5bb8fbd16f49d 616 PRINTS PR00369 Flavodoxin signature 82 95 5.9E-14 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AL543_11010 76b4818e2293593fe7e5bb8fbd16f49d 616 PRINTS PR00369 Flavodoxin signature 186 205 5.9E-14 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AL543_11010 76b4818e2293593fe7e5bb8fbd16f49d 616 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 473 492 5.7E-27 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL543_11010 76b4818e2293593fe7e5bb8fbd16f49d 616 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 511 522 5.7E-27 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL543_11010 76b4818e2293593fe7e5bb8fbd16f49d 616 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 565 573 5.7E-27 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL543_11010 76b4818e2293593fe7e5bb8fbd16f49d 616 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 287 297 5.7E-27 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL543_11010 76b4818e2293593fe7e5bb8fbd16f49d 616 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 498 507 5.7E-27 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL543_11010 76b4818e2293593fe7e5bb8fbd16f49d 616 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 542 558 5.7E-27 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL543_11010 76b4818e2293593fe7e5bb8fbd16f49d 616 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 403 410 5.7E-27 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL543_11010 76b4818e2293593fe7e5bb8fbd16f49d 616 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 14 616 49.876 T 11-10-2018 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL543_11010 76b4818e2293593fe7e5bb8fbd16f49d 616 Gene3D G3DSA:2.40.30.10 249 456 2.8E-75 T 11-10-2018 AL543_09235 68c34b592a754b2d7dcfdb77ceb5a7c9 327 Gene3D G3DSA:3.40.190.10 108 318 2.2E-56 T 11-10-2018 AL543_09235 68c34b592a754b2d7dcfdb77ceb5a7c9 327 Pfam PF03466 LysR substrate binding domain 111 321 7.6E-27 T 11-10-2018 IPR005119 LysR, substrate-binding AL543_09235 68c34b592a754b2d7dcfdb77ceb5a7c9 327 Gene3D G3DSA:3.40.190.10 196 294 2.2E-56 T 11-10-2018 AL543_09235 68c34b592a754b2d7dcfdb77ceb5a7c9 327 SUPERFAMILY SSF53850 106 320 8.51E-46 T 11-10-2018 AL543_09235 68c34b592a754b2d7dcfdb77ceb5a7c9 327 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 83 1.2E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_09235 68c34b592a754b2d7dcfdb77ceb5a7c9 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.1E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_09235 68c34b592a754b2d7dcfdb77ceb5a7c9 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 61 72 1.1E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_09235 68c34b592a754b2d7dcfdb77ceb5a7c9 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 61 1.1E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_09235 68c34b592a754b2d7dcfdb77ceb5a7c9 327 SUPERFAMILY SSF46785 21 101 2.68E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_09235 68c34b592a754b2d7dcfdb77ceb5a7c9 327 Gene3D G3DSA:1.10.10.10 15 103 4.0E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_11425 67f91e9130b3bdaf19decfe29a29fc64 796 Gene3D G3DSA:2.60.450.10 50 98 7.8E-9 T 11-10-2018 AL543_11425 67f91e9130b3bdaf19decfe29a29fc64 796 Pfam PF04453 Organic solvent tolerance protein 297 697 2.0E-111 T 11-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 AL543_11425 67f91e9130b3bdaf19decfe29a29fc64 796 Pfam PF03968 OstA-like protein 57 189 5.0E-19 T 11-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal AL543_11425 67f91e9130b3bdaf19decfe29a29fc64 796 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 3 768 20.117 T 11-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 AL543_14240 c6053cfd333672ee79b96931631e0ccd 329 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 5 329 37.03 T 11-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL543_14240 c6053cfd333672ee79b96931631e0ccd 329 SUPERFAMILY SSF102114 7 287 1.57E-67 T 11-10-2018 AL543_14240 c6053cfd333672ee79b96931631e0ccd 329 Gene3D G3DSA:3.20.20.70 2 329 1.0E-79 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_14240 c6053cfd333672ee79b96931631e0ccd 329 Pfam PF13353 4Fe-4S single cluster domain 23 125 1.7E-8 T 11-10-2018 AL543_14240 c6053cfd333672ee79b96931631e0ccd 329 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 6 329 1.3E-103 T 11-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL543_14240 c6053cfd333672ee79b96931631e0ccd 329 SMART SM00729 14 211 2.7E-4 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AL543_14240 c6053cfd333672ee79b96931631e0ccd 329 Pfam PF06463 Molybdenum Cofactor Synthesis C 186 312 2.3E-39 T 11-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL543_14240 c6053cfd333672ee79b96931631e0ccd 329 Pfam PF04055 Radical SAM superfamily 19 181 1.2E-25 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL543_06785 d77019630b785cd8b2db34a38f5c3add 420 SMART SM00842 10 196 1.2E-96 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 AL543_06785 d77019630b785cd8b2db34a38f5c3add 420 Gene3D G3DSA:3.30.420.40 13 379 2.3E-111 T 11-10-2018 AL543_06785 d77019630b785cd8b2db34a38f5c3add 420 SUPERFAMILY SSF53067 198 384 4.32E-44 T 11-10-2018 AL543_06785 d77019630b785cd8b2db34a38f5c3add 420 Gene3D G3DSA:3.30.1490.110 87 169 2.3E-111 T 11-10-2018 AL543_06785 d77019630b785cd8b2db34a38f5c3add 420 Gene3D G3DSA:3.30.420.40 197 359 2.3E-111 T 11-10-2018 AL543_06785 d77019630b785cd8b2db34a38f5c3add 420 Pfam PF14450 Cell division protein FtsA 207 381 9.7E-24 T 11-10-2018 AL543_06785 d77019630b785cd8b2db34a38f5c3add 420 Gene3D G3DSA:3.90.640.10 235 300 2.3E-111 T 11-10-2018 AL543_06785 d77019630b785cd8b2db34a38f5c3add 420 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 4.3E-151 T 11-10-2018 IPR020823 Cell division protein FtsA AL543_06785 d77019630b785cd8b2db34a38f5c3add 420 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 420 29.102 T 11-10-2018 IPR020823 Cell division protein FtsA AL543_06785 d77019630b785cd8b2db34a38f5c3add 420 PIRSF PIRSF003101 1 420 2.3E-146 T 11-10-2018 IPR020823 Cell division protein FtsA AL543_06785 d77019630b785cd8b2db34a38f5c3add 420 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 1.6E-28 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 AL543_06785 d77019630b785cd8b2db34a38f5c3add 420 SUPERFAMILY SSF53067 8 221 4.4E-60 T 11-10-2018 AL543_11430 0407d7008b2300e0a7e8a79a7794f835 284 PRINTS PR00625 DnaJ domain signature 238 253 2.0E-12 T 11-10-2018 IPR001623 DnaJ domain AL543_11430 0407d7008b2300e0a7e8a79a7794f835 284 PRINTS PR00625 DnaJ domain signature 220 238 2.0E-12 T 11-10-2018 IPR001623 DnaJ domain AL543_11430 0407d7008b2300e0a7e8a79a7794f835 284 PRINTS PR00625 DnaJ domain signature 262 282 2.0E-12 T 11-10-2018 IPR001623 DnaJ domain AL543_11430 0407d7008b2300e0a7e8a79a7794f835 284 Pfam PF05099 Tellurite resistance protein TerB 44 177 2.1E-19 T 11-10-2018 IPR007791 Co-chaperone DjlA, N-terminal AL543_11430 0407d7008b2300e0a7e8a79a7794f835 284 Gene3D G3DSA:1.10.3680.10 35 190 6.5E-25 T 11-10-2018 IPR029024 TerB-like AL543_11430 0407d7008b2300e0a7e8a79a7794f835 284 SUPERFAMILY SSF46565 138 280 3.87E-34 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AL543_11430 0407d7008b2300e0a7e8a79a7794f835 284 Gene3D G3DSA:1.10.287.110 195 282 5.7E-19 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AL543_11430 0407d7008b2300e0a7e8a79a7794f835 284 SUPERFAMILY SSF158682 48 181 3.92E-23 T 11-10-2018 IPR029024 TerB-like AL543_11430 0407d7008b2300e0a7e8a79a7794f835 284 Hamap MF_01153 Co-chaperone protein DjlA [djlA]. 3 283 40.16 T 11-10-2018 IPR023749 Co-chaperone DjlA GO:0051087 AL543_11430 0407d7008b2300e0a7e8a79a7794f835 284 Pfam PF00226 DnaJ domain 218 280 7.3E-15 T 11-10-2018 IPR001623 DnaJ domain AL543_11430 0407d7008b2300e0a7e8a79a7794f835 284 SMART SM00271 217 282 5.1E-22 T 11-10-2018 IPR001623 DnaJ domain AL543_04745 bd2516bc135acbed5a347500bc039da1 281 SUPERFAMILY SSF46689 167 218 1.08E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_04745 bd2516bc135acbed5a347500bc039da1 281 SUPERFAMILY SSF46689 221 269 7.17E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_04745 bd2516bc135acbed5a347500bc039da1 281 SUPERFAMILY SSF51215 32 150 2.75E-5 T 11-10-2018 IPR037923 Transcription regulator HTH-like AL543_04745 bd2516bc135acbed5a347500bc039da1 281 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 221 262 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL543_04745 bd2516bc135acbed5a347500bc039da1 281 Pfam PF12833 Helix-turn-helix domain 190 267 1.8E-19 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL543_04745 bd2516bc135acbed5a347500bc039da1 281 SMART SM00342 184 266 1.7E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL543_04745 bd2516bc135acbed5a347500bc039da1 281 Gene3D G3DSA:1.10.10.60 163 272 1.4E-24 T 11-10-2018 AL543_04745 bd2516bc135acbed5a347500bc039da1 281 Pfam PF12852 Cupin 2 153 1.4E-19 T 11-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain AL543_00905 1fd1c5260201b3071ed05487cf0e51b3 649 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 549 565 - T 11-10-2018 IPR002178 PTS EIIA type-2 domain AL543_00905 1fd1c5260201b3071ed05487cf0e51b3 649 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 9 344 1.7E-170 T 11-10-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197 AL543_00905 1fd1c5260201b3071ed05487cf0e51b3 649 SUPERFAMILY SSF55804 505 643 1.83E-39 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AL543_00905 1fd1c5260201b3071ed05487cf0e51b3 649 Gene3D G3DSA:3.40.930.10 501 646 2.1E-49 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AL543_00905 1fd1c5260201b3071ed05487cf0e51b3 649 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 386 460 8.9E-10 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL543_00905 1fd1c5260201b3071ed05487cf0e51b3 649 Gene3D G3DSA:3.40.50.2300 371 476 1.2E-35 T 11-10-2018 AL543_00905 1fd1c5260201b3071ed05487cf0e51b3 649 SUPERFAMILY SSF52794 384 472 3.14E-23 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 AL543_00905 1fd1c5260201b3071ed05487cf0e51b3 649 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 506 644 6.0E-33 T 11-10-2018 IPR002178 PTS EIIA type-2 domain AL543_00905 1fd1c5260201b3071ed05487cf0e51b3 649 Pfam PF02378 Phosphotransferase system, EIIC 18 278 2.7E-18 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL543_15770 81472a25e7d1b111145d1a94a0ea2931 102 PIRSF PIRSF000699 1 102 5.8E-38 T 11-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 AL543_15770 81472a25e7d1b111145d1a94a0ea2931 102 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 6 98 4.0E-33 T 11-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 AL543_15770 81472a25e7d1b111145d1a94a0ea2931 102 SUPERFAMILY SSF46973 2 98 3.92E-33 T 11-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 AL543_15770 81472a25e7d1b111145d1a94a0ea2931 102 Gene3D G3DSA:1.20.58.280 1 101 1.2E-34 T 11-10-2018 AL543_14400 fbf0407985b03ac9318d3793af5daac1 200 SUPERFAMILY SSF111304 2 199 6.67E-71 T 11-10-2018 IPR023627 Recombination protein RecR AL543_14400 fbf0407985b03ac9318d3793af5daac1 200 Gene3D G3DSA:3.40.1360.10 78 199 1.1E-38 T 11-10-2018 AL543_14400 fbf0407985b03ac9318d3793af5daac1 200 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 100.936 T 11-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 AL543_14400 fbf0407985b03ac9318d3793af5daac1 200 Pfam PF02132 RecR protein 41 77 2.7E-15 T 11-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger AL543_14400 fbf0407985b03ac9318d3793af5daac1 200 Gene3D G3DSA:1.10.8.420 1 52 3.9E-19 T 11-10-2018 AL543_14400 fbf0407985b03ac9318d3793af5daac1 200 Pfam PF13662 Toprim domain 82 172 1.5E-23 T 11-10-2018 IPR006171 TOPRIM domain AL543_14400 fbf0407985b03ac9318d3793af5daac1 200 TIGRFAM TIGR00615 recR: recombination protein RecR 3 197 4.8E-79 T 11-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 AL543_14400 fbf0407985b03ac9318d3793af5daac1 200 SMART SM00493 81 166 2.6E-18 T 11-10-2018 IPR006171 TOPRIM domain AL543_10815 490e8c439323be43716763d8b330702b 369 SUPERFAMILY SSF54862 165 281 1.09E-19 T 11-10-2018 AL543_10815 490e8c439323be43716763d8b330702b 369 Pfam PF08331 Domain of unknown function (DUF1730) 58 136 2.1E-23 T 11-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 AL543_10815 490e8c439323be43716763d8b330702b 369 Pfam PF13484 4Fe-4S double cluster binding domain 188 252 5.2E-20 T 11-10-2018 AL543_10815 490e8c439323be43716763d8b330702b 369 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 3 311 51.446 T 11-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 AL543_10815 490e8c439323be43716763d8b330702b 369 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 189 200 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL543_10815 490e8c439323be43716763d8b330702b 369 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 10 343 9.1E-153 T 11-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 AL543_17930 603f7c2c945a60547defd848a2404e7d 484 Gene3D G3DSA:3.40.50.2000 254 465 4.6E-158 T 11-10-2018 AL543_17930 603f7c2c945a60547defd848a2404e7d 484 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 5 479 4.8E-157 T 11-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 AL543_17930 603f7c2c945a60547defd848a2404e7d 484 Pfam PF00534 Glycosyl transferases group 1 300 443 2.8E-14 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AL543_17930 603f7c2c945a60547defd848a2404e7d 484 Pfam PF08323 Starch synthase catalytic domain 5 235 3.1E-68 T 11-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 AL543_17930 603f7c2c945a60547defd848a2404e7d 484 Gene3D G3DSA:3.40.50.2000 6 479 4.6E-158 T 11-10-2018 AL543_17930 603f7c2c945a60547defd848a2404e7d 484 SUPERFAMILY SSF53756 5 481 8.48E-116 T 11-10-2018 AL543_17930 603f7c2c945a60547defd848a2404e7d 484 Hamap MF_00484 Glycogen synthase [glgA]. 4 481 41.291 T 11-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 AL543_04795 cced3720d0c54bf37d18d780e62b04d2 250 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 33 205 1.7E-12 T 11-10-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system AL543_12835 b8c29a1ee2770b5869eac5f8544a1ad0 433 Gene3D G3DSA:3.30.450.20 86 200 1.2E-10 T 11-10-2018 AL543_12835 b8c29a1ee2770b5869eac5f8544a1ad0 433 Pfam PF00989 PAS fold 99 153 1.4E-7 T 11-10-2018 IPR013767 PAS fold GO:0006355 AL543_12835 b8c29a1ee2770b5869eac5f8544a1ad0 433 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 318 427 1.4E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_12835 b8c29a1ee2770b5869eac5f8544a1ad0 433 SUPERFAMILY SSF55874 261 427 1.7E-40 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_12835 b8c29a1ee2770b5869eac5f8544a1ad0 433 SMART SM00091 98 166 2.0E-5 T 11-10-2018 IPR000014 PAS domain AL543_12835 b8c29a1ee2770b5869eac5f8544a1ad0 433 Gene3D G3DSA:1.10.287.130 201 275 9.6E-21 T 11-10-2018 AL543_12835 b8c29a1ee2770b5869eac5f8544a1ad0 433 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 99 203 1.3E-5 T 11-10-2018 IPR000014 PAS domain AL543_12835 b8c29a1ee2770b5869eac5f8544a1ad0 433 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 94 424 3.0E-136 T 11-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 AL543_12835 b8c29a1ee2770b5869eac5f8544a1ad0 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 2.0E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_12835 b8c29a1ee2770b5869eac5f8544a1ad0 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 382 2.0E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_12835 b8c29a1ee2770b5869eac5f8544a1ad0 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 407 2.0E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_12835 b8c29a1ee2770b5869eac5f8544a1ad0 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 426 2.0E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_12835 b8c29a1ee2770b5869eac5f8544a1ad0 433 Pfam PF11808 Domain of unknown function (DUF3329) 7 91 4.1E-31 T 11-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 AL543_12835 b8c29a1ee2770b5869eac5f8544a1ad0 433 SUPERFAMILY SSF55785 86 197 3.49E-11 T 11-10-2018 IPR035965 PAS domain superfamily AL543_12835 b8c29a1ee2770b5869eac5f8544a1ad0 433 SMART SM00388 205 272 3.6E-20 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_12835 b8c29a1ee2770b5869eac5f8544a1ad0 433 SUPERFAMILY SSF47384 192 272 1.16E-18 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL543_12835 b8c29a1ee2770b5869eac5f8544a1ad0 433 Gene3D G3DSA:3.30.565.10 279 430 7.5E-37 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_12835 b8c29a1ee2770b5869eac5f8544a1ad0 433 SMART SM00387 317 429 1.6E-32 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_12835 b8c29a1ee2770b5869eac5f8544a1ad0 433 Pfam PF00512 His Kinase A (phospho-acceptor) domain 205 271 3.0E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_14735 2fcc01f84e9489617ff90aafd738df74 439 Gene3D G3DSA:3.30.565.10 279 435 2.5E-50 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_14735 2fcc01f84e9489617ff90aafd738df74 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 404 1.1E-20 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_14735 2fcc01f84e9489617ff90aafd738df74 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 355 369 1.1E-20 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_14735 2fcc01f84e9489617ff90aafd738df74 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 383 1.1E-20 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_14735 2fcc01f84e9489617ff90aafd738df74 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 423 1.1E-20 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_14735 2fcc01f84e9489617ff90aafd738df74 439 SUPERFAMILY SSF47384 169 222 1.02E-6 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL543_14735 2fcc01f84e9489617ff90aafd738df74 439 Gene3D G3DSA:1.10.287.130 150 271 3.0E-24 T 11-10-2018 AL543_14735 2fcc01f84e9489617ff90aafd738df74 439 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 320 424 5.3E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_14735 2fcc01f84e9489617ff90aafd738df74 439 SMART SM00388 174 276 3.4E-4 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_14735 2fcc01f84e9489617ff90aafd738df74 439 SMART SM00387 317 426 2.4E-34 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_14735 2fcc01f84e9489617ff90aafd738df74 439 Gene3D G3DSA:3.30.450.20 1 135 2.2E-35 T 11-10-2018 AL543_14735 2fcc01f84e9489617ff90aafd738df74 439 SUPERFAMILY SSF55874 270 424 5.89E-44 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_14735 2fcc01f84e9489617ff90aafd738df74 439 Pfam PF00512 His Kinase A (phospho-acceptor) domain 175 274 4.0E-9 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_14735 2fcc01f84e9489617ff90aafd738df74 439 Pfam PF08448 PAS fold 12 131 2.1E-5 T 11-10-2018 IPR013656 PAS fold-4 AL543_19515 fd4325e4ed58cf4126be7218fb692e0e 240 SUPERFAMILY SSF51735 3 221 2.22E-33 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_19515 fd4325e4ed58cf4126be7218fb692e0e 240 Pfam PF00106 short chain dehydrogenase 3 189 6.8E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_19515 fd4325e4ed58cf4126be7218fb692e0e 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 4.7E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_19515 fd4325e4ed58cf4126be7218fb692e0e 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 4.7E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_19515 fd4325e4ed58cf4126be7218fb692e0e 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 4.7E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_19515 fd4325e4ed58cf4126be7218fb692e0e 240 Gene3D G3DSA:3.40.50.720 1 240 2.0E-40 T 11-10-2018 AL543_10440 77a31110b3877ebd35aff9faa9cf5fc7 680 Gene3D G3DSA:2.40.170.20 160 680 1.6E-113 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AL543_10440 77a31110b3877ebd35aff9faa9cf5fc7 680 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 54 680 3.7E-106 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AL543_10440 77a31110b3877ebd35aff9faa9cf5fc7 680 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 146 1.0E-20 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AL543_10440 77a31110b3877ebd35aff9faa9cf5fc7 680 Pfam PF00593 TonB dependent receptor 239 679 2.5E-58 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AL543_10440 77a31110b3877ebd35aff9faa9cf5fc7 680 SUPERFAMILY SSF56935 20 680 1.36E-126 T 11-10-2018 AL543_10440 77a31110b3877ebd35aff9faa9cf5fc7 680 Gene3D G3DSA:2.170.130.10 34 156 2.6E-32 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AL543_10440 77a31110b3877ebd35aff9faa9cf5fc7 680 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 663 680 - T 11-10-2018 IPR010917 TonB-dependent receptor, conserved site AL543_15370 7b026db8d841b92cad4b0e0f5184c738 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 1.0E-18 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_15370 7b026db8d841b92cad4b0e0f5184c738 214 Gene3D G3DSA:3.40.50.12740 2 209 2.6E-60 T 11-10-2018 AL543_15370 7b026db8d841b92cad4b0e0f5184c738 214 Pfam PF00072 Response regulator receiver domain 4 116 5.2E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_15370 7b026db8d841b92cad4b0e0f5184c738 214 SMART SM00421 146 203 5.2E-18 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_15370 7b026db8d841b92cad4b0e0f5184c738 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_15370 7b026db8d841b92cad4b0e0f5184c738 214 SUPERFAMILY SSF46894 135 210 3.4E-19 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL543_15370 7b026db8d841b92cad4b0e0f5184c738 214 SMART SM00448 2 115 1.7E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_15370 7b026db8d841b92cad4b0e0f5184c738 214 SUPERFAMILY SSF52172 3 132 7.97E-34 T 11-10-2018 IPR011006 CheY-like superfamily AL543_15370 7b026db8d841b92cad4b0e0f5184c738 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.0E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_15370 7b026db8d841b92cad4b0e0f5184c738 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.0E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_15370 7b026db8d841b92cad4b0e0f5184c738 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.0E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_18310 2b8bbd78b19fe910f4243b8a75cd7419 146 Gene3D G3DSA:3.30.420.270 63 136 1.6E-18 T 11-10-2018 AL543_18310 2b8bbd78b19fe910f4243b8a75cd7419 146 TIGRFAM TIGR02801 tolR: protein TolR 12 144 1.1E-37 T 11-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 AL543_18310 2b8bbd78b19fe910f4243b8a75cd7419 146 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 5 144 27.932 T 11-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 AL543_18310 2b8bbd78b19fe910f4243b8a75cd7419 146 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 145 6.2E-26 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 AL543_04265 43bb9919eff46ee63ae6655422005564 334 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 272 300 - T 11-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AL543_04265 43bb9919eff46ee63ae6655422005564 334 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 330 33.285 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AL543_04265 43bb9919eff46ee63ae6655422005564 334 Pfam PF07478 D-ala D-ala ligase C-terminus 126 325 7.1E-54 T 11-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AL543_04265 43bb9919eff46ee63ae6655422005564 334 PIRSF PIRSF039102 1 334 4.4E-79 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AL543_04265 43bb9919eff46ee63ae6655422005564 334 SUPERFAMILY SSF52440 3 115 5.56E-28 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AL543_04265 43bb9919eff46ee63ae6655422005564 334 SUPERFAMILY SSF56059 116 328 4.91E-44 T 11-10-2018 AL543_04265 43bb9919eff46ee63ae6655422005564 334 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 83 94 - T 11-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AL543_04265 43bb9919eff46ee63ae6655422005564 334 Gene3D G3DSA:3.30.470.20 105 320 2.0E-83 T 11-10-2018 AL543_04265 43bb9919eff46ee63ae6655422005564 334 Pfam PF01820 D-ala D-ala ligase N-terminus 6 106 1.9E-21 T 11-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AL543_04265 43bb9919eff46ee63ae6655422005564 334 Gene3D G3DSA:3.40.50.20 19 325 2.0E-83 T 11-10-2018 AL543_04265 43bb9919eff46ee63ae6655422005564 334 Gene3D G3DSA:3.30.1490.20 132 199 2.0E-83 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AL543_04265 43bb9919eff46ee63ae6655422005564 334 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 6 329 1.5E-104 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AL543_14935 49f91fd67ec015162c879134c0634b3d 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 1.2E-18 T 11-10-2018 IPR000362 Fumarate lyase family AL543_14935 49f91fd67ec015162c879134c0634b3d 456 PRINTS PR00149 Fumarate lyase superfamily signature 252 279 1.2E-18 T 11-10-2018 IPR000362 Fumarate lyase family AL543_14935 49f91fd67ec015162c879134c0634b3d 456 PRINTS PR00149 Fumarate lyase superfamily signature 295 311 1.2E-18 T 11-10-2018 IPR000362 Fumarate lyase family AL543_14935 49f91fd67ec015162c879134c0634b3d 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 1.2E-18 T 11-10-2018 IPR000362 Fumarate lyase family AL543_14935 49f91fd67ec015162c879134c0634b3d 456 Pfam PF00206 Lyase 14 313 8.5E-73 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal AL543_14935 49f91fd67ec015162c879134c0634b3d 456 Gene3D G3DSA:1.20.200.10 118 447 1.1E-158 T 11-10-2018 AL543_14935 49f91fd67ec015162c879134c0634b3d 456 Gene3D G3DSA:1.10.40.30 383 446 1.1E-158 T 11-10-2018 AL543_14935 49f91fd67ec015162c879134c0634b3d 456 SUPERFAMILY SSF48557 4 449 2.98E-109 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 AL543_14935 49f91fd67ec015162c879134c0634b3d 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 456 9.4E-152 T 11-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL543_14935 49f91fd67ec015162c879134c0634b3d 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 332 446 6.9E-52 T 11-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 AL543_14935 49f91fd67ec015162c879134c0634b3d 456 Gene3D G3DSA:1.10.275.10 1 117 2.3E-50 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal AL543_14935 49f91fd67ec015162c879134c0634b3d 456 ProSitePatterns PS00163 Fumarate lyases signature. 295 304 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AL543_07405 17273cf91d73c55a24019b1237ea78be 969 SMART SM00490 519 603 1.7E-17 T 11-10-2018 IPR001650 Helicase, C-terminal AL543_07405 17273cf91d73c55a24019b1237ea78be 969 SUPERFAMILY SSF52540 273 647 6.89E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_07405 17273cf91d73c55a24019b1237ea78be 969 SUPERFAMILY SSF52540 118 378 4.72E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_07405 17273cf91d73c55a24019b1237ea78be 969 SMART SM00487 150 342 7.6E-14 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL543_07405 17273cf91d73c55a24019b1237ea78be 969 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 967 29.045 T 11-10-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 AL543_07405 17273cf91d73c55a24019b1237ea78be 969 Gene3D G3DSA:3.30.360.80 714 786 1.4E-30 T 11-10-2018 AL543_07405 17273cf91d73c55a24019b1237ea78be 969 Gene3D G3DSA:3.40.50.300 432 635 2.6E-46 T 11-10-2018 AL543_07405 17273cf91d73c55a24019b1237ea78be 969 Pfam PF12137 RNA polymerase recycling family C-terminal 607 966 4.0E-145 T 11-10-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 AL543_07405 17273cf91d73c55a24019b1237ea78be 969 Gene3D G3DSA:2.30.30.140 1 53 9.9E-24 T 11-10-2018 AL543_07405 17273cf91d73c55a24019b1237ea78be 969 Gene3D G3DSA:2.30.30.930 55 114 9.8E-26 T 11-10-2018 AL543_07405 17273cf91d73c55a24019b1237ea78be 969 Pfam PF00176 SNF2 family N-terminal domain 174 345 1.5E-15 T 11-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 AL543_07405 17273cf91d73c55a24019b1237ea78be 969 Pfam PF00271 Helicase conserved C-terminal domain 495 603 1.3E-15 T 11-10-2018 IPR001650 Helicase, C-terminal AL543_07405 17273cf91d73c55a24019b1237ea78be 969 Gene3D G3DSA:3.40.50.10810 150 431 2.9E-103 T 11-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily AL543_04710 df76b5c94e4342ad1174938da5d6681c 580 SUPERFAMILY SSF52794 125 225 8.72E-36 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 AL543_04710 df76b5c94e4342ad1174938da5d6681c 580 Gene3D G3DSA:3.40.50.2300 1 105 3.8E-24 T 11-10-2018 AL543_04710 df76b5c94e4342ad1174938da5d6681c 580 Gene3D G3DSA:3.40.50.2300 115 225 1.2E-39 T 11-10-2018 AL543_04710 df76b5c94e4342ad1174938da5d6681c 580 SUPERFAMILY SSF52794 4 103 5.23E-27 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 AL543_04710 df76b5c94e4342ad1174938da5d6681c 580 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 7 89 1.8E-13 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL543_04710 df76b5c94e4342ad1174938da5d6681c 580 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 128 211 1.0E-15 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL543_04710 df76b5c94e4342ad1174938da5d6681c 580 Pfam PF02378 Phosphotransferase system, EIIC 251 514 2.8E-17 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL543_04710 df76b5c94e4342ad1174938da5d6681c 580 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 233 569 5.1E-142 T 11-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 AL543_04710 df76b5c94e4342ad1174938da5d6681c 580 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 127 210 2.1E-36 T 11-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 AL543_19785 e5733bca8618694e8e425795747f6389 548 Gene3D G3DSA:3.30.310.50 443 546 3.7E-35 T 11-10-2018 AL543_19785 e5733bca8618694e8e425795747f6389 548 Gene3D G3DSA:3.40.120.10 319 442 2.3E-34 T 11-10-2018 AL543_19785 e5733bca8618694e8e425795747f6389 548 SUPERFAMILY SSF53738 26 235 8.48E-53 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL543_19785 e5733bca8618694e8e425795747f6389 548 SUPERFAMILY SSF55957 432 544 1.88E-20 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL543_19785 e5733bca8618694e8e425795747f6389 548 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 317 4.0E-17 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL543_19785 e5733bca8618694e8e425795747f6389 548 SUPERFAMILY SSF53738 209 317 2.71E-7 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL543_19785 e5733bca8618694e8e425795747f6389 548 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL543_19785 e5733bca8618694e8e425795747f6389 548 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 490 535 3.4E-6 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL543_19785 e5733bca8618694e8e425795747f6389 548 Gene3D G3DSA:3.40.120.10 221 318 6.9E-45 T 11-10-2018 AL543_19785 e5733bca8618694e8e425795747f6389 548 SUPERFAMILY SSF53738 305 447 6.28E-31 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL543_19785 e5733bca8618694e8e425795747f6389 548 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 180 7.4E-40 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL543_19785 e5733bca8618694e8e425795747f6389 548 Gene3D G3DSA:3.40.120.10 12 218 3.0E-73 T 11-10-2018 AL543_19785 e5733bca8618694e8e425795747f6389 548 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 320 438 4.8E-28 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL543_19785 e5733bca8618694e8e425795747f6389 548 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 544 0.0 T 11-10-2018 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6317|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-6981|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7900|MetaCyc: PWY-7902 AL543_16905 0d94e56d578d04d03fbbe239cea146e7 232 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 221 7.2E-10 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL543_16905 0d94e56d578d04d03fbbe239cea146e7 232 SUPERFAMILY SSF161098 8 222 2.09E-31 T 11-10-2018 IPR035906 MetI-like superfamily AL543_16905 0d94e56d578d04d03fbbe239cea146e7 232 Gene3D G3DSA:1.10.3720.10 1 229 6.4E-29 T 11-10-2018 IPR035906 MetI-like superfamily AL543_18385 13d273dc423c8207cd78347634d474b1 200 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 24 195 3.6E-17 T 11-10-2018 IPR018635 Uncharacterised protein family UPF0319 AL543_06430 ef12dc1c8db798bdeb26bbde4b586ba4 304 SUPERFAMILY SSF53850 92 297 2.72E-40 T 11-10-2018 AL543_06430 ef12dc1c8db798bdeb26bbde4b586ba4 304 Pfam PF03466 LysR substrate binding domain 90 294 3.3E-47 T 11-10-2018 IPR005119 LysR, substrate-binding AL543_06430 ef12dc1c8db798bdeb26bbde4b586ba4 304 SUPERFAMILY SSF46785 3 84 2.49E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_06430 ef12dc1c8db798bdeb26bbde4b586ba4 304 Gene3D G3DSA:3.40.190.290 94 298 2.0E-37 T 11-10-2018 AL543_06430 ef12dc1c8db798bdeb26bbde4b586ba4 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 3.6E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_06430 ef12dc1c8db798bdeb26bbde4b586ba4 304 Gene3D G3DSA:1.10.10.10 4 93 2.3E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_00960 5a107a2d6c417e28ee1497faae1adea8 131 SUPERFAMILY SSF52821 27 130 8.51E-22 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AL543_00960 5a107a2d6c417e28ee1497faae1adea8 131 Gene3D G3DSA:3.40.250.10 12 128 9.7E-25 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AL543_00960 5a107a2d6c417e28ee1497faae1adea8 131 Pfam PF00581 Rhodanese-like domain 40 122 7.8E-9 T 11-10-2018 IPR001763 Rhodanese-like domain AL543_00960 5a107a2d6c417e28ee1497faae1adea8 131 SMART SM00450 29 127 4.1E-10 T 11-10-2018 IPR001763 Rhodanese-like domain AL543_10540 d5ba5597d67b3f9ec549b5409772cc01 497 Gene3D G3DSA:3.30.420.150 114 291 4.3E-82 T 11-10-2018 AL543_10540 d5ba5597d67b3f9ec549b5409772cc01 497 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 4 495 52.883 T 11-10-2018 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40 AL543_10540 d5ba5597d67b3f9ec549b5409772cc01 497 Pfam PF02541 Ppx/GppA phosphatase family 23 303 2.1E-88 T 11-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 AL543_10540 d5ba5597d67b3f9ec549b5409772cc01 497 SUPERFAMILY SSF109604 309 495 4.71E-42 T 11-10-2018 AL543_10540 d5ba5597d67b3f9ec549b5409772cc01 497 Gene3D G3DSA:3.30.420.40 11 299 4.3E-82 T 11-10-2018 AL543_10540 d5ba5597d67b3f9ec549b5409772cc01 497 SUPERFAMILY SSF53067 135 304 1.78E-42 T 11-10-2018 AL543_10540 d5ba5597d67b3f9ec549b5409772cc01 497 SUPERFAMILY SSF53067 9 129 4.21E-36 T 11-10-2018 AL543_10540 d5ba5597d67b3f9ec549b5409772cc01 497 Gene3D G3DSA:1.10.3210.10 306 497 1.1E-47 T 11-10-2018 AL543_10540 d5ba5597d67b3f9ec549b5409772cc01 497 PIRSF PIRSF001267 1 497 4.1E-179 T 11-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 AL543_04275 9d01ee25f74b60c400b41f28b5df2bf6 103 SUPERFAMILY SSF55159 3 99 1.44E-26 T 11-10-2018 IPR036877 SUI1 domain superfamily GO:0003743|GO:0006413 AL543_04275 9d01ee25f74b60c400b41f28b5df2bf6 103 Pfam PF01253 Translation initiation factor SUI1 27 97 5.3E-19 T 11-10-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 AL543_04275 9d01ee25f74b60c400b41f28b5df2bf6 103 Gene3D G3DSA:3.30.780.10 23 103 1.2E-30 T 11-10-2018 AL543_04275 9d01ee25f74b60c400b41f28b5df2bf6 103 PIRSF PIRSF037511 1 103 6.4E-32 T 11-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 AL543_04275 9d01ee25f74b60c400b41f28b5df2bf6 103 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 3 103 9.6E-39 T 11-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 AL543_15365 d74bba72c83241e229810d04aa5ccd6d 787 Gene3D G3DSA:2.40.50.590 6 153 2.0E-36 T 11-10-2018 AL543_15365 d74bba72c83241e229810d04aa5ccd6d 787 Pfam PF03104 DNA polymerase family B, exonuclease domain 154 296 1.6E-14 T 11-10-2018 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL543_15365 d74bba72c83241e229810d04aa5ccd6d 787 Gene3D G3DSA:3.90.1600.10 458 636 4.3E-56 T 11-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL543_15365 d74bba72c83241e229810d04aa5ccd6d 787 Gene3D G3DSA:3.90.1600.10 348 442 1.6E-29 T 11-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL543_15365 d74bba72c83241e229810d04aa5ccd6d 787 Gene3D G3DSA:1.10.132.60 643 787 1.6E-59 T 11-10-2018 AL543_15365 d74bba72c83241e229810d04aa5ccd6d 787 Gene3D G3DSA:3.30.420.10 156 347 3.0E-70 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AL543_15365 d74bba72c83241e229810d04aa5ccd6d 787 SMART SM00486 153 558 1.4E-60 T 11-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL543_15365 d74bba72c83241e229810d04aa5ccd6d 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 415 428 1.6E-10 T 11-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL543_15365 d74bba72c83241e229810d04aa5ccd6d 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 544 552 1.6E-10 T 11-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL543_15365 d74bba72c83241e229810d04aa5ccd6d 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 492 504 1.6E-10 T 11-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL543_15365 d74bba72c83241e229810d04aa5ccd6d 787 SUPERFAMILY SSF53098 4 389 1.08E-80 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_15365 d74bba72c83241e229810d04aa5ccd6d 787 Pfam PF00136 DNA polymerase family B 378 742 1.3E-40 T 11-10-2018 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL543_15365 d74bba72c83241e229810d04aa5ccd6d 787 SUPERFAMILY SSF56672 385 780 1.17E-114 T 11-10-2018 AL543_15365 d74bba72c83241e229810d04aa5ccd6d 787 Gene3D G3DSA:3.30.70.2250 41 108 2.0E-36 T 11-10-2018 AL543_15365 d74bba72c83241e229810d04aa5ccd6d 787 ProSitePatterns PS00116 DNA polymerase family B signature. 546 554 - T 11-10-2018 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL543_16100 c6e4b0c6776328ad0aee6106de40652a 1325 SUPERFAMILY SSF52172 991 1138 7.12E-39 T 11-10-2018 IPR011006 CheY-like superfamily AL543_16100 c6e4b0c6776328ad0aee6106de40652a 1325 Gene3D G3DSA:3.40.50.2300 850 969 1.9E-27 T 11-10-2018 AL543_16100 c6e4b0c6776328ad0aee6106de40652a 1325 Pfam PF08448 PAS fold 478 588 3.9E-10 T 11-10-2018 IPR013656 PAS fold-4 AL543_16100 c6e4b0c6776328ad0aee6106de40652a 1325 SMART SM00448 992 1105 3.1E-35 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_16100 c6e4b0c6776328ad0aee6106de40652a 1325 SMART SM00448 852 965 3.7E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_16100 c6e4b0c6776328ad0aee6106de40652a 1325 Pfam PF00072 Response regulator receiver domain 995 1105 6.5E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_16100 c6e4b0c6776328ad0aee6106de40652a 1325 Pfam PF00072 Response regulator receiver domain 854 965 1.6E-19 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_16100 c6e4b0c6776328ad0aee6106de40652a 1325 SMART SM00073 1154 1250 8.1E-10 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AL543_16100 c6e4b0c6776328ad0aee6106de40652a 1325 Gene3D G3DSA:3.30.450.20 457 595 2.0E-19 T 11-10-2018 AL543_16100 c6e4b0c6776328ad0aee6106de40652a 1325 Pfam PF01627 Hpt domain 1163 1243 6.8E-15 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AL543_16100 c6e4b0c6776328ad0aee6106de40652a 1325 SMART SM00387 718 834 8.3E-37 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_16100 c6e4b0c6776328ad0aee6106de40652a 1325 Gene3D G3DSA:3.40.50.2300 990 1126 8.8E-43 T 11-10-2018 AL543_16100 c6e4b0c6776328ad0aee6106de40652a 1325 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 475 593 5.0E-14 T 11-10-2018 IPR000014 PAS domain AL543_16100 c6e4b0c6776328ad0aee6106de40652a 1325 Gene3D G3DSA:1.10.287.130 596 671 2.5E-25 T 11-10-2018 AL543_16100 c6e4b0c6776328ad0aee6106de40652a 1325 SUPERFAMILY SSF55781 288 451 1.96E-7 T 11-10-2018 AL543_16100 c6e4b0c6776328ad0aee6106de40652a 1325 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 718 830 1.5E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_16100 c6e4b0c6776328ad0aee6106de40652a 1325 Gene3D G3DSA:3.30.565.10 672 837 7.6E-52 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_16100 c6e4b0c6776328ad0aee6106de40652a 1325 Gene3D G3DSA:1.20.120.160 1142 1255 3.9E-20 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AL543_16100 c6e4b0c6776328ad0aee6106de40652a 1325 SUPERFAMILY SSF47226 1140 1278 7.07E-21 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AL543_16100 c6e4b0c6776328ad0aee6106de40652a 1325 SMART SM00091 472 538 1.1E-8 T 11-10-2018 IPR000014 PAS domain AL543_16100 c6e4b0c6776328ad0aee6106de40652a 1325 Pfam PF00512 His Kinase A (phospho-acceptor) domain 606 671 4.6E-20 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_16100 c6e4b0c6776328ad0aee6106de40652a 1325 SUPERFAMILY SSF52172 851 971 6.97E-27 T 11-10-2018 IPR011006 CheY-like superfamily AL543_16100 c6e4b0c6776328ad0aee6106de40652a 1325 SUPERFAMILY SSF55874 660 830 1.57E-45 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_16100 c6e4b0c6776328ad0aee6106de40652a 1325 SMART SM00388 606 671 1.9E-24 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_16100 c6e4b0c6776328ad0aee6106de40652a 1325 SUPERFAMILY SSF47384 590 672 2.16E-22 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL543_16100 c6e4b0c6776328ad0aee6106de40652a 1325 PRINTS PR00344 Bacterial sensor protein C-terminal signature 818 831 7.4E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_16100 c6e4b0c6776328ad0aee6106de40652a 1325 PRINTS PR00344 Bacterial sensor protein C-terminal signature 759 773 7.4E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_16100 c6e4b0c6776328ad0aee6106de40652a 1325 PRINTS PR00344 Bacterial sensor protein C-terminal signature 777 787 7.4E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_16100 c6e4b0c6776328ad0aee6106de40652a 1325 PRINTS PR00344 Bacterial sensor protein C-terminal signature 794 812 7.4E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_16100 c6e4b0c6776328ad0aee6106de40652a 1325 SUPERFAMILY SSF55785 485 595 2.27E-16 T 11-10-2018 IPR035965 PAS domain superfamily AL543_01310 c95cb075ed7b9efb6a82ed834f9ba518 405 Pfam PF13614 AAA domain 110 296 6.1E-23 T 11-10-2018 IPR025669 AAA domain AL543_01310 c95cb075ed7b9efb6a82ed834f9ba518 405 SUPERFAMILY SSF52540 108 369 7.23E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_01310 c95cb075ed7b9efb6a82ed834f9ba518 405 Gene3D G3DSA:1.10.1660.30 36 102 1.0E-5 T 11-10-2018 AL543_01310 c95cb075ed7b9efb6a82ed834f9ba518 405 Gene3D G3DSA:3.40.50.300 107 397 1.1E-56 T 11-10-2018 AL543_09350 3de5643b836d731bf2e2c68dbd81b555 393 SUPERFAMILY SSF46565 217 266 3.14E-6 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AL543_09350 3de5643b836d731bf2e2c68dbd81b555 393 Gene3D G3DSA:1.10.287.110 203 271 9.0E-6 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AL543_01710 45ffab783962ded7bd94dbd5ac1f7860 152 Pfam PF01047 MarR family 46 103 1.5E-16 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL543_01710 45ffab783962ded7bd94dbd5ac1f7860 152 SMART SM00347 39 137 1.7E-21 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL543_01710 45ffab783962ded7bd94dbd5ac1f7860 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 80 95 5.7E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL543_01710 45ffab783962ded7bd94dbd5ac1f7860 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 79 5.7E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL543_01710 45ffab783962ded7bd94dbd5ac1f7860 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 99 115 5.7E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL543_01710 45ffab783962ded7bd94dbd5ac1f7860 152 Gene3D G3DSA:1.10.10.10 13 152 7.2E-35 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_01710 45ffab783962ded7bd94dbd5ac1f7860 152 SUPERFAMILY SSF46785 12 152 8.2E-36 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_06930 da984b338aa82ccfbea215b9a125b1cc 213 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 15 198 1.2E-63 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 AL543_06930 da984b338aa82ccfbea215b9a125b1cc 213 Pfam PF01121 Dephospho-CoA kinase 15 191 1.1E-69 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 AL543_06930 da984b338aa82ccfbea215b9a125b1cc 213 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 13 208 27.024 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 AL543_06930 da984b338aa82ccfbea215b9a125b1cc 213 SUPERFAMILY SSF52540 12 203 2.49E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_06930 da984b338aa82ccfbea215b9a125b1cc 213 Gene3D G3DSA:3.40.50.300 11 212 1.0E-64 T 11-10-2018 AL543_08970 8d38cd7c53e5c0f7791ee6d9fe3f33ce 205 PIRSF PIRSF000005 1 205 9.5E-63 T 11-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 AL543_08970 8d38cd7c53e5c0f7791ee6d9fe3f33ce 205 SUPERFAMILY SSF46626 114 203 4.28E-20 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL543_08970 8d38cd7c53e5c0f7791ee6d9fe3f33ce 205 Gene3D G3DSA:1.10.760.10 19 108 4.1E-25 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL543_08970 8d38cd7c53e5c0f7791ee6d9fe3f33ce 205 Pfam PF00034 Cytochrome c 31 104 5.9E-10 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL543_08970 8d38cd7c53e5c0f7791ee6d9fe3f33ce 205 Pfam PF00034 Cytochrome c 116 201 8.0E-8 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL543_08970 8d38cd7c53e5c0f7791ee6d9fe3f33ce 205 SUPERFAMILY SSF46626 6 105 2.76E-20 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL543_08970 8d38cd7c53e5c0f7791ee6d9fe3f33ce 205 PRINTS PR00605 Class IC cytochrome C signature 30 41 2.2E-5 T 11-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AL543_08970 8d38cd7c53e5c0f7791ee6d9fe3f33ce 205 PRINTS PR00605 Class IC cytochrome C signature 79 101 2.2E-5 T 11-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AL543_08970 8d38cd7c53e5c0f7791ee6d9fe3f33ce 205 Gene3D G3DSA:1.10.760.10 109 205 2.6E-26 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL543_02215 12a592be15c6df2235e4fbdca39b8a34 245 Gene3D G3DSA:3.40.50.1580 4 240 4.3E-69 T 11-10-2018 AL543_02215 12a592be15c6df2235e4fbdca39b8a34 245 SUPERFAMILY SSF53167 5 217 4.97E-62 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 AL543_02215 12a592be15c6df2235e4fbdca39b8a34 245 Pfam PF01048 Phosphorylase superfamily 15 197 7.7E-32 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AL543_10155 167f6e2724fb8489de7a424dc612c279 441 Pfam PF01609 Transposase DDE domain 127 352 1.5E-25 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AL543_10155 167f6e2724fb8489de7a424dc612c279 441 Pfam PF13006 Insertion element 4 transposase N-terminal 18 108 6.3E-28 T 11-10-2018 IPR024473 Transposase, IS4, N-terminal AL543_10155 167f6e2724fb8489de7a424dc612c279 441 SUPERFAMILY SSF53098 110 374 5.54E-27 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_06485 167f6e2724fb8489de7a424dc612c279 441 Pfam PF01609 Transposase DDE domain 127 352 1.5E-25 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AL543_06485 167f6e2724fb8489de7a424dc612c279 441 Pfam PF13006 Insertion element 4 transposase N-terminal 18 108 6.3E-28 T 11-10-2018 IPR024473 Transposase, IS4, N-terminal AL543_06485 167f6e2724fb8489de7a424dc612c279 441 SUPERFAMILY SSF53098 110 374 5.54E-27 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_14010 167f6e2724fb8489de7a424dc612c279 441 Pfam PF01609 Transposase DDE domain 127 352 1.5E-25 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AL543_14010 167f6e2724fb8489de7a424dc612c279 441 Pfam PF13006 Insertion element 4 transposase N-terminal 18 108 6.3E-28 T 11-10-2018 IPR024473 Transposase, IS4, N-terminal AL543_14010 167f6e2724fb8489de7a424dc612c279 441 SUPERFAMILY SSF53098 110 374 5.54E-27 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_12480 0e532e5a2c72e6154f53085ec69169fb 193 Gene3D G3DSA:3.90.79.10 22 180 2.0E-50 T 11-10-2018 AL543_12480 0e532e5a2c72e6154f53085ec69169fb 193 PRINTS PR00502 NUDIX hydrolase family signature 68 83 8.4E-8 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL543_12480 0e532e5a2c72e6154f53085ec69169fb 193 PRINTS PR00502 NUDIX hydrolase family signature 54 68 8.4E-8 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL543_12480 0e532e5a2c72e6154f53085ec69169fb 193 ProSitePatterns PS00893 Nudix box signature. 59 80 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AL543_12480 0e532e5a2c72e6154f53085ec69169fb 193 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 22 177 37.359 T 11-10-2018 IPR022927 RNA pyrophosphohydrolase RppH AL543_12480 0e532e5a2c72e6154f53085ec69169fb 193 Pfam PF00293 NUDIX domain 28 166 1.0E-26 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL543_12480 0e532e5a2c72e6154f53085ec69169fb 193 SUPERFAMILY SSF55811 27 173 7.72E-32 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AL543_06955 7078af533d64c4d8f81745a8594a3678 195 SUPERFAMILY SSF53474 7 193 1.27E-17 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL543_06955 7078af533d64c4d8f81745a8594a3678 195 Gene3D G3DSA:3.40.50.1820 7 195 3.0E-62 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL543_06955 7078af533d64c4d8f81745a8594a3678 195 Pfam PF05728 Uncharacterised protein family (UPF0227) 8 193 1.4E-76 T 11-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA AL543_17935 56842d6cc7d0e5b8ae6db0bb2081b1dc 405 Gene3D G3DSA:3.90.550.10 2 286 4.5E-85 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL543_17935 56842d6cc7d0e5b8ae6db0bb2081b1dc 405 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 403 49.98 T 11-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AL543_17935 56842d6cc7d0e5b8ae6db0bb2081b1dc 405 Pfam PF00483 Nucleotidyl transferase 6 273 1.5E-62 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AL543_17935 56842d6cc7d0e5b8ae6db0bb2081b1dc 405 Gene3D G3DSA:2.160.10.10 287 403 5.1E-34 T 11-10-2018 AL543_17935 56842d6cc7d0e5b8ae6db0bb2081b1dc 405 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 193 203 - T 11-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AL543_17935 56842d6cc7d0e5b8ae6db0bb2081b1dc 405 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 95 103 - T 11-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AL543_17935 56842d6cc7d0e5b8ae6db0bb2081b1dc 405 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 11-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AL543_17935 56842d6cc7d0e5b8ae6db0bb2081b1dc 405 SUPERFAMILY SSF53448 4 357 1.43E-68 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL543_17935 56842d6cc7d0e5b8ae6db0bb2081b1dc 405 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 4 377 1.6E-151 T 11-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AL543_17935 56842d6cc7d0e5b8ae6db0bb2081b1dc 405 SUPERFAMILY SSF51161 292 400 3.53E-20 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AL543_03805 322550a9482fd085868e4f7eb0d6738d 575 SMART SM00304 241 294 0.0062 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_03805 322550a9482fd085868e4f7eb0d6738d 575 Gene3D G3DSA:1.10.287.950 240 572 5.1E-66 T 11-10-2018 AL543_03805 322550a9482fd085868e4f7eb0d6738d 575 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 357 537 2.5E-39 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_03805 322550a9482fd085868e4f7eb0d6738d 575 SMART SM00283 313 570 6.9E-56 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_03805 322550a9482fd085868e4f7eb0d6738d 575 SUPERFAMILY SSF58104 262 571 5.14E-69 T 11-10-2018 AL543_02435 9c9a22ed79290ce7b35368a395222a6e 530 Gene3D G3DSA:3.40.50.300 180 364 1.6E-63 T 11-10-2018 AL543_02435 9c9a22ed79290ce7b35368a395222a6e 530 Gene3D G3DSA:1.10.8.60 365 429 1.2E-19 T 11-10-2018 AL543_02435 9c9a22ed79290ce7b35368a395222a6e 530 SUPERFAMILY SSF52540 193 426 7.26E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_02435 9c9a22ed79290ce7b35368a395222a6e 530 Gene3D G3DSA:3.30.450.40 2 175 3.2E-14 T 11-10-2018 IPR029016 GAF-like domain superfamily AL543_02435 9c9a22ed79290ce7b35368a395222a6e 530 Pfam PF01590 GAF domain 23 156 1.5E-7 T 11-10-2018 IPR003018 GAF domain GO:0005515 AL543_02435 9c9a22ed79290ce7b35368a395222a6e 530 Gene3D G3DSA:1.10.10.60 463 521 2.0E-9 T 11-10-2018 AL543_02435 9c9a22ed79290ce7b35368a395222a6e 530 SUPERFAMILY SSF46689 466 518 1.33E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_02435 9c9a22ed79290ce7b35368a395222a6e 530 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 280 295 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL543_02435 9c9a22ed79290ce7b35368a395222a6e 530 Pfam PF00158 Sigma-54 interaction domain 194 360 3.2E-68 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL543_02435 9c9a22ed79290ce7b35368a395222a6e 530 SMART SM00065 21 169 6.8E-6 T 11-10-2018 IPR003018 GAF domain GO:0005515 AL543_02435 9c9a22ed79290ce7b35368a395222a6e 530 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 407 416 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AL543_02435 9c9a22ed79290ce7b35368a395222a6e 530 SMART SM00382 214 357 9.5E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_02435 9c9a22ed79290ce7b35368a395222a6e 530 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 218 231 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL543_02435 9c9a22ed79290ce7b35368a395222a6e 530 SUPERFAMILY SSF55781 3 159 4.14E-16 T 11-10-2018 AL543_08270 161754478c0c1b59e8033ca723d0dc97 80 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 79 18.04 T 11-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 AL543_08270 161754478c0c1b59e8033ca723d0dc97 80 Gene3D G3DSA:1.20.5.340 1 79 2.1E-28 T 11-10-2018 AL543_08270 161754478c0c1b59e8033ca723d0dc97 80 Pfam PF06005 Cell division protein ZapB 1 77 9.1E-26 T 11-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 AL543_06995 fe2ebdc77f9dca7532f50e6c0baa965f 267 Gene3D G3DSA:1.10.287.70 10 211 4.7E-43 T 11-10-2018 AL543_06995 fe2ebdc77f9dca7532f50e6c0baa965f 267 SUPERFAMILY SSF81324 7 210 8.77E-49 T 11-10-2018 AL543_06995 fe2ebdc77f9dca7532f50e6c0baa965f 267 Pfam PF00520 Ion transport protein 20 207 8.2E-17 T 11-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 AL543_06995 fe2ebdc77f9dca7532f50e6c0baa965f 267 PRINTS PR00169 Potassium channel signature 123 146 1.7E-7 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AL543_06995 fe2ebdc77f9dca7532f50e6c0baa965f 267 PRINTS PR00169 Potassium channel signature 183 209 1.7E-7 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AL543_06995 fe2ebdc77f9dca7532f50e6c0baa965f 267 PRINTS PR00169 Potassium channel signature 154 176 1.7E-7 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AL543_19960 77a0ac216798819e0c3177e9c44b4c24 579 Pfam PF01514 Secretory protein of YscJ/FliF family 62 248 1.6E-55 T 11-10-2018 IPR006182 Secretory protein YscJ/FliF AL543_19960 77a0ac216798819e0c3177e9c44b4c24 579 Gene3D G3DSA:3.30.300.30 151 246 6.7E-9 T 11-10-2018 AL543_19960 77a0ac216798819e0c3177e9c44b4c24 579 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 52 578 4.8E-76 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AL543_19960 77a0ac216798819e0c3177e9c44b4c24 579 PRINTS PR01009 Flagellar M-ring protein signature 224 242 7.3E-24 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AL543_19960 77a0ac216798819e0c3177e9c44b4c24 579 PRINTS PR01009 Flagellar M-ring protein signature 181 195 7.3E-24 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AL543_19960 77a0ac216798819e0c3177e9c44b4c24 579 PRINTS PR01009 Flagellar M-ring protein signature 294 312 7.3E-24 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AL543_19960 77a0ac216798819e0c3177e9c44b4c24 579 PRINTS PR01009 Flagellar M-ring protein signature 149 167 7.3E-24 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AL543_19960 77a0ac216798819e0c3177e9c44b4c24 579 PRINTS PR01009 Flagellar M-ring protein signature 374 398 7.3E-24 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AL543_19960 77a0ac216798819e0c3177e9c44b4c24 579 PIRSF PIRSF004862 29 579 1.4E-158 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AL543_19960 77a0ac216798819e0c3177e9c44b4c24 579 Pfam PF08345 Flagellar M-ring protein C-terminal 281 451 2.2E-40 T 11-10-2018 IPR013556 Flagellar M-ring C-terminal AL543_08490 90ebb70ae6e569fe0cfb2eb2ca5cf7f1 194 SUPERFAMILY SSF54523 7 79 1.1E-7 T 11-10-2018 AL543_08490 90ebb70ae6e569fe0cfb2eb2ca5cf7f1 194 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 1.7E-5 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL543_08490 90ebb70ae6e569fe0cfb2eb2ca5cf7f1 194 PRINTS PR00885 Bacterial general secretion pathway protein H signature 2 16 3.1E-22 T 11-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AL543_08490 90ebb70ae6e569fe0cfb2eb2ca5cf7f1 194 PRINTS PR00885 Bacterial general secretion pathway protein H signature 17 31 3.1E-22 T 11-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AL543_08490 90ebb70ae6e569fe0cfb2eb2ca5cf7f1 194 PRINTS PR00885 Bacterial general secretion pathway protein H signature 145 160 3.1E-22 T 11-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AL543_08490 90ebb70ae6e569fe0cfb2eb2ca5cf7f1 194 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL543_08490 90ebb70ae6e569fe0cfb2eb2ca5cf7f1 194 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 3 186 7.8E-13 T 11-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AL543_08490 90ebb70ae6e569fe0cfb2eb2ca5cf7f1 194 Pfam PF12019 Type II transport protein GspH 42 181 8.1E-8 T 11-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 AL543_08490 90ebb70ae6e569fe0cfb2eb2ca5cf7f1 194 Gene3D G3DSA:3.55.40.10 33 194 5.3E-55 T 11-10-2018 AL543_19105 cf3c2c2d43d2eabbf7a78b43c76925c6 623 SMART SM00563 455 569 3.8E-36 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AL543_19105 cf3c2c2d43d2eabbf7a78b43c76925c6 623 Pfam PF01553 Acyltransferase 440 566 5.6E-25 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AL543_19105 cf3c2c2d43d2eabbf7a78b43c76925c6 623 SUPERFAMILY SSF103473 14 423 1.23E-25 T 11-10-2018 IPR036259 MFS transporter superfamily AL543_19105 cf3c2c2d43d2eabbf7a78b43c76925c6 623 SUPERFAMILY SSF69593 404 568 6.28E-29 T 11-10-2018 AL543_19105 cf3c2c2d43d2eabbf7a78b43c76925c6 623 Gene3D G3DSA:1.20.1250.20 9 421 3.6E-25 T 11-10-2018 AL543_19105 cf3c2c2d43d2eabbf7a78b43c76925c6 623 Pfam PF07690 Major Facilitator Superfamily 18 317 2.8E-12 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL543_02810 03319e48c27fcdb0ebb347d00a492f1f 548 Gene3D G3DSA:1.10.287.950 218 548 5.3E-70 T 11-10-2018 AL543_02810 03319e48c27fcdb0ebb347d00a492f1f 548 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 331 515 2.9E-41 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_02810 03319e48c27fcdb0ebb347d00a492f1f 548 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 384 411 5.2E-22 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL543_02810 03319e48c27fcdb0ebb347d00a492f1f 548 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 21 46 5.2E-22 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL543_02810 03319e48c27fcdb0ebb347d00a492f1f 548 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 413 442 5.2E-22 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL543_02810 03319e48c27fcdb0ebb347d00a492f1f 548 SUPERFAMILY SSF58104 240 548 7.98E-76 T 11-10-2018 AL543_02810 03319e48c27fcdb0ebb347d00a492f1f 548 SMART SM00283 286 547 8.9E-98 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_02810 03319e48c27fcdb0ebb347d00a492f1f 548 SMART SM00304 218 271 7.1E-4 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_02810 03319e48c27fcdb0ebb347d00a492f1f 548 Pfam PF12729 Four helix bundle sensory module for signal transduction 12 190 8.1E-14 T 11-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain AL543_06685 3b67f2bf35bf70e172306de8d1164fcf 1487 Pfam PF01493 GXGXG motif 1236 1420 6.5E-73 T 11-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 AL543_06685 3b67f2bf35bf70e172306de8d1164fcf 1487 Gene3D G3DSA:3.60.20.10 13 436 1.2E-165 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL543_06685 3b67f2bf35bf70e172306de8d1164fcf 1487 Pfam PF04898 Glutamate synthase central domain 458 738 2.3E-103 T 11-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 AL543_06685 3b67f2bf35bf70e172306de8d1164fcf 1487 Gene3D G3DSA:3.20.20.70 782 1201 2.4E-182 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_06685 3b67f2bf35bf70e172306de8d1164fcf 1487 Gene3D G3DSA:2.160.20.60 1202 1468 5.8E-100 T 11-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 AL543_06685 3b67f2bf35bf70e172306de8d1164fcf 1487 SUPERFAMILY SSF69336 1213 1465 2.75E-87 T 11-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 AL543_06685 3b67f2bf35bf70e172306de8d1164fcf 1487 Gene3D G3DSA:3.20.20.70 437 781 3.7E-122 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_06685 3b67f2bf35bf70e172306de8d1164fcf 1487 Pfam PF01645 Conserved region in glutamate synthase 794 1157 3.5E-152 T 11-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 AL543_06685 3b67f2bf35bf70e172306de8d1164fcf 1487 Pfam PF00310 Glutamine amidotransferases class-II 13 426 6.3E-179 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain AL543_06685 3b67f2bf35bf70e172306de8d1164fcf 1487 SUPERFAMILY SSF56235 13 429 3.51E-148 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL543_06685 3b67f2bf35bf70e172306de8d1164fcf 1487 SUPERFAMILY SSF51395 434 1191 2.34E-250 T 11-10-2018 AL543_19760 90ddd44051f562fca67b4412d4fdee1c 114 PIRSF PIRSF000169 1 114 1.2E-36 T 11-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 AL543_19760 90ddd44051f562fca67b4412d4fdee1c 114 Gene3D G3DSA:1.20.1300.10 1 114 1.4E-28 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL543_19760 90ddd44051f562fca67b4412d4fdee1c 114 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 10 99 5.9E-6 T 11-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL543_19760 90ddd44051f562fca67b4412d4fdee1c 114 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 112 3.6E-33 T 11-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 AL543_19760 90ddd44051f562fca67b4412d4fdee1c 114 SUPERFAMILY SSF81343 4 113 6.54E-25 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL543_12105 83982ae041fa238bbcd984870fc1be71 148 Gene3D G3DSA:1.20.120.910 17 147 1.2E-35 T 11-10-2018 AL543_12105 83982ae041fa238bbcd984870fc1be71 148 SUPERFAMILY SSF57716 108 146 5.7E-10 T 11-10-2018 AL543_12105 83982ae041fa238bbcd984870fc1be71 148 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 111 135 - T 11-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site AL543_12105 83982ae041fa238bbcd984870fc1be71 148 PRINTS PR00618 DksA/TraR zinc finger signature 123 135 9.7E-5 T 11-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria AL543_12105 83982ae041fa238bbcd984870fc1be71 148 PRINTS PR00618 DksA/TraR zinc finger signature 111 122 9.7E-5 T 11-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria AL543_12105 83982ae041fa238bbcd984870fc1be71 148 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 25 147 29.719 T 11-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 AL543_12105 83982ae041fa238bbcd984870fc1be71 148 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 107 140 3.2E-10 T 11-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AL543_12105 83982ae041fa238bbcd984870fc1be71 148 SUPERFAMILY SSF109635 7 106 1.83E-36 T 11-10-2018 IPR037187 DksA, N-terminal domain superfamily AL543_12105 83982ae041fa238bbcd984870fc1be71 148 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 29 137 7.4E-51 T 11-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 AL543_08505 03df2c4f79a688107f41f1a6cd4e31d3 503 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 323 337 - T 11-10-2018 IPR001482 Type II/IV secretion system protein AL543_08505 03df2c4f79a688107f41f1a6cd4e31d3 503 Gene3D G3DSA:3.30.300.160 1 93 6.4E-49 T 11-10-2018 AL543_08505 03df2c4f79a688107f41f1a6cd4e31d3 503 Gene3D G3DSA:3.40.50.300 229 503 1.2E-129 T 11-10-2018 AL543_08505 03df2c4f79a688107f41f1a6cd4e31d3 503 Pfam PF00437 Type II/IV secretion system protein 130 395 2.8E-90 T 11-10-2018 IPR001482 Type II/IV secretion system protein AL543_08505 03df2c4f79a688107f41f1a6cd4e31d3 503 SMART SM00382 256 379 5.8E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_08505 03df2c4f79a688107f41f1a6cd4e31d3 503 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 14 500 2.4E-235 T 11-10-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 AL543_08505 03df2c4f79a688107f41f1a6cd4e31d3 503 Gene3D G3DSA:3.30.450.90 94 228 5.1E-56 T 11-10-2018 AL543_08505 03df2c4f79a688107f41f1a6cd4e31d3 503 SUPERFAMILY SSF52540 110 500 9.81E-107 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_08505 03df2c4f79a688107f41f1a6cd4e31d3 503 SUPERFAMILY SSF160246 15 81 1.7E-15 T 11-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily AL543_08900 021b4eccc0a03f040d40c773b9fef3f2 276 SUPERFAMILY SSF54506 2 274 1.57E-52 T 11-10-2018 AL543_08900 021b4eccc0a03f040d40c773b9fef3f2 276 Gene3D G3DSA:3.10.310.10 5 272 5.0E-106 T 11-10-2018 AL543_08900 021b4eccc0a03f040d40c773b9fef3f2 276 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 39.559 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AL543_08900 021b4eccc0a03f040d40c773b9fef3f2 276 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 11-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AL543_08900 021b4eccc0a03f040d40c773b9fef3f2 276 Gene3D G3DSA:3.10.310.10 117 263 5.0E-106 T 11-10-2018 AL543_08900 021b4eccc0a03f040d40c773b9fef3f2 276 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 274 6.0E-102 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AL543_08900 021b4eccc0a03f040d40c773b9fef3f2 276 Pfam PF01678 Diaminopimelate epimerase 5 125 4.1E-34 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AL543_08900 021b4eccc0a03f040d40c773b9fef3f2 276 Pfam PF01678 Diaminopimelate epimerase 154 269 1.0E-30 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AL543_01085 e9d4786ccc4c00a334e5cf5c8df10e22 639 Gene3D G3DSA:3.30.450.20 74 181 1.1E-51 T 11-10-2018 AL543_01085 e9d4786ccc4c00a334e5cf5c8df10e22 639 Gene3D G3DSA:1.10.287.950 308 639 2.3E-71 T 11-10-2018 AL543_01085 e9d4786ccc4c00a334e5cf5c8df10e22 639 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 439 605 1.1E-42 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_01085 e9d4786ccc4c00a334e5cf5c8df10e22 639 SUPERFAMILY SSF103190 102 187 5.76E-9 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily AL543_01085 e9d4786ccc4c00a334e5cf5c8df10e22 639 Pfam PF00672 HAMP domain 313 359 7.1E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_01085 e9d4786ccc4c00a334e5cf5c8df10e22 639 Gene3D G3DSA:3.30.450.20 63 281 1.1E-51 T 11-10-2018 AL543_01085 e9d4786ccc4c00a334e5cf5c8df10e22 639 Pfam PF02743 Cache domain 50 270 4.7E-24 T 11-10-2018 IPR033479 Double Cache domain 1 AL543_01085 e9d4786ccc4c00a334e5cf5c8df10e22 639 SMART SM00304 365 415 100.0 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_01085 e9d4786ccc4c00a334e5cf5c8df10e22 639 SMART SM00304 305 362 7.4E-10 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_01085 e9d4786ccc4c00a334e5cf5c8df10e22 639 SMART SM00283 377 638 1.8E-73 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_01085 e9d4786ccc4c00a334e5cf5c8df10e22 639 SUPERFAMILY SSF58104 330 639 1.22E-77 T 11-10-2018 AL543_15305 a92e504e6a892730a1d9d0fabc75d57f 546 Pfam PF00089 Trypsin 33 269 1.3E-49 T 11-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AL543_15305 a92e504e6a892730a1d9d0fabc75d57f 546 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 122 136 2.9E-13 T 11-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AL543_15305 a92e504e6a892730a1d9d0fabc75d57f 546 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 220 232 2.9E-13 T 11-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AL543_15305 a92e504e6a892730a1d9d0fabc75d57f 546 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 64 79 2.9E-13 T 11-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AL543_15305 a92e504e6a892730a1d9d0fabc75d57f 546 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 524 544 3.8E-4 T 11-10-2018 IPR020008 GlyGly-CTERM domain AL543_15305 a92e504e6a892730a1d9d0fabc75d57f 546 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 221 232 - T 11-10-2018 IPR033116 Serine proteases, trypsin family, serine active site AL543_15305 a92e504e6a892730a1d9d0fabc75d57f 546 SUPERFAMILY SSF50494 6 274 1.6E-67 T 11-10-2018 IPR009003 Peptidase S1, PA clan AL543_15305 a92e504e6a892730a1d9d0fabc75d57f 546 Gene3D G3DSA:2.40.10.10 45 142 1.8E-65 T 11-10-2018 AL543_15305 a92e504e6a892730a1d9d0fabc75d57f 546 Gene3D G3DSA:2.60.40.10 274 387 6.4E-44 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL543_15305 a92e504e6a892730a1d9d0fabc75d57f 546 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 74 79 - T 11-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 AL543_15305 a92e504e6a892730a1d9d0fabc75d57f 546 Gene3D G3DSA:2.40.10.10 33 269 1.8E-65 T 11-10-2018 AL543_15305 a92e504e6a892730a1d9d0fabc75d57f 546 SMART SM00020 32 269 2.6E-71 T 11-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AL543_07970 f5bf4c1dbb674d8c5afbf62716f3f2c2 255 SUPERFAMILY SSF53850 18 249 2.17E-21 T 11-10-2018 AL543_07970 f5bf4c1dbb674d8c5afbf62716f3f2c2 255 Gene3D G3DSA:3.40.190.10 114 208 2.0E-10 T 11-10-2018 AL543_07970 f5bf4c1dbb674d8c5afbf62716f3f2c2 255 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 30 249 5.1E-7 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL543_07970 f5bf4c1dbb674d8c5afbf62716f3f2c2 255 Gene3D G3DSA:3.40.190.10 31 240 2.0E-10 T 11-10-2018 AL543_12115 daa8471539f73644cd80069baad24440 820 SMART SM00847 386 476 1.9E-10 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 AL543_12115 daa8471539f73644cd80069baad24440 820 SUPERFAMILY SSF52540 14 472 1.4E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_12115 daa8471539f73644cd80069baad24440 820 Gene3D G3DSA:3.40.50.300 180 344 1.2E-50 T 11-10-2018 AL543_12115 daa8471539f73644cd80069baad24440 820 Gene3D G3DSA:1.20.120.1080 371 473 2.1E-8 T 11-10-2018 AL543_12115 daa8471539f73644cd80069baad24440 820 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 4 817 0.0 T 11-10-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 AL543_12115 daa8471539f73644cd80069baad24440 820 SMART SM00487 2 186 1.8E-15 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL543_12115 daa8471539f73644cd80069baad24440 820 Pfam PF00271 Helicase conserved C-terminal domain 205 326 4.8E-13 T 11-10-2018 IPR001650 Helicase, C-terminal AL543_12115 daa8471539f73644cd80069baad24440 820 Gene3D G3DSA:3.40.50.300 1 179 1.0E-52 T 11-10-2018 AL543_12115 daa8471539f73644cd80069baad24440 820 SMART SM00490 226 327 9.6E-15 T 11-10-2018 IPR001650 Helicase, C-terminal AL543_12115 daa8471539f73644cd80069baad24440 820 Pfam PF04408 Helicase associated domain (HA2) 387 475 7.3E-10 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 AL543_12115 daa8471539f73644cd80069baad24440 820 Pfam PF08482 ATP-dependent helicase C-terminal 673 805 2.4E-51 T 11-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal AL543_12115 daa8471539f73644cd80069baad24440 820 PIRSF PIRSF005496 1 819 0.0 T 11-10-2018 AL543_12115 daa8471539f73644cd80069baad24440 820 Pfam PF00270 DEAD/DEAH box helicase 11 165 8.3E-9 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL543_18125 1753065c15191ca0d7c3fad1c7f19ff7 172 Gene3D G3DSA:1.20.120.1220 1 127 1.3E-5 T 11-10-2018 AL543_18125 1753065c15191ca0d7c3fad1c7f19ff7 172 Pfam PF01478 Type IV leader peptidase family 7 108 2.9E-12 T 11-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 AL543_18275 763ba9a4d46593aecb81f7e9bb76e789 731 Gene3D G3DSA:1.10.287.130 320 418 1.4E-24 T 11-10-2018 AL543_18275 763ba9a4d46593aecb81f7e9bb76e789 731 SMART SM00388 355 420 6.0E-22 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_18275 763ba9a4d46593aecb81f7e9bb76e789 731 Gene3D G3DSA:3.40.50.2300 585 720 2.8E-32 T 11-10-2018 AL543_18275 763ba9a4d46593aecb81f7e9bb76e789 731 SUPERFAMILY SSF52172 599 726 6.4E-31 T 11-10-2018 IPR011006 CheY-like superfamily AL543_18275 763ba9a4d46593aecb81f7e9bb76e789 731 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 467 581 1.3E-31 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_18275 763ba9a4d46593aecb81f7e9bb76e789 731 Pfam PF00512 His Kinase A (phospho-acceptor) domain 355 420 1.5E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_18275 763ba9a4d46593aecb81f7e9bb76e789 731 Pfam PF00072 Response regulator receiver domain 603 715 8.5E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_18275 763ba9a4d46593aecb81f7e9bb76e789 731 SMART SM00387 467 582 1.3E-38 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_18275 763ba9a4d46593aecb81f7e9bb76e789 731 SMART SM00448 601 715 1.6E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_18275 763ba9a4d46593aecb81f7e9bb76e789 731 PRINTS PR00344 Bacterial sensor protein C-terminal signature 525 535 1.7E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_18275 763ba9a4d46593aecb81f7e9bb76e789 731 PRINTS PR00344 Bacterial sensor protein C-terminal signature 542 560 1.7E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_18275 763ba9a4d46593aecb81f7e9bb76e789 731 PRINTS PR00344 Bacterial sensor protein C-terminal signature 566 579 1.7E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_18275 763ba9a4d46593aecb81f7e9bb76e789 731 PRINTS PR00344 Bacterial sensor protein C-terminal signature 507 521 1.7E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_18275 763ba9a4d46593aecb81f7e9bb76e789 731 Gene3D G3DSA:3.30.565.10 419 584 2.8E-49 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_18275 763ba9a4d46593aecb81f7e9bb76e789 731 SUPERFAMILY SSF47384 343 421 2.75E-18 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL543_18275 763ba9a4d46593aecb81f7e9bb76e789 731 SUPERFAMILY SSF55874 409 583 9.04E-46 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_18275 763ba9a4d46593aecb81f7e9bb76e789 731 Gene3D G3DSA:3.30.450.20 38 208 3.4E-18 T 11-10-2018 AL543_08340 9e29c7f0ab1782736ec4a4fc447c893a 581 Pfam PF00999 Sodium/hydrogen exchanger family 15 386 2.4E-56 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AL543_08340 9e29c7f0ab1782736ec4a4fc447c893a 581 SMART SM01091 493 572 1.4E-6 T 11-10-2018 IPR005170 Transporter-associated domain AL543_08340 9e29c7f0ab1782736ec4a4fc447c893a 581 Pfam PF03471 Transporter associated domain 497 570 2.3E-5 T 11-10-2018 IPR005170 Transporter-associated domain AL543_08340 9e29c7f0ab1782736ec4a4fc447c893a 581 SUPERFAMILY SSF56176 499 570 2.59E-6 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AL543_08340 9e29c7f0ab1782736ec4a4fc447c893a 581 Gene3D G3DSA:3.30.70.1450 412 487 1.4E-11 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AL543_08340 9e29c7f0ab1782736ec4a4fc447c893a 581 Hamap MF_01075 K(+)/H(+) antiporter NhaP2 [nhaP2]. 1 575 51.641 T 11-10-2018 IPR023729 K(+)/H(+) antiporter NhaP2 GO:0005451|GO:0006812|GO:0006813|GO:0006884|GO:0016021 AL543_08340 9e29c7f0ab1782736ec4a4fc447c893a 581 Gene3D G3DSA:1.20.1530.20 7 392 7.1E-22 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily AL543_08340 9e29c7f0ab1782736ec4a4fc447c893a 581 Pfam PF02080 TrkA-C domain 417 484 1.3E-11 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL543_08340 9e29c7f0ab1782736ec4a4fc447c893a 581 SUPERFAMILY SSF116726 413 484 4.97E-10 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AL543_01885 07d79f26acdbedf44b92360f25b2edb4 656 Gene3D G3DSA:2.60.40.1180 555 647 4.1E-6 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta AL543_01885 07d79f26acdbedf44b92360f25b2edb4 656 Gene3D G3DSA:3.20.20.80 116 550 2.1E-143 T 11-10-2018 AL543_01885 07d79f26acdbedf44b92360f25b2edb4 656 Pfam PF00128 Alpha amylase, catalytic domain 199 252 1.1E-5 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL543_01885 07d79f26acdbedf44b92360f25b2edb4 656 Gene3D G3DSA:2.60.40.10 1 114 2.7E-18 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL543_01885 07d79f26acdbedf44b92360f25b2edb4 656 SUPERFAMILY SSF51011 556 648 8.63E-14 T 11-10-2018 AL543_01885 07d79f26acdbedf44b92360f25b2edb4 656 SUPERFAMILY SSF81296 7 124 1.18E-18 T 11-10-2018 IPR014756 Immunoglobulin E-set AL543_01885 07d79f26acdbedf44b92360f25b2edb4 656 SUPERFAMILY SSF51445 113 542 4.01E-100 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AL543_01885 07d79f26acdbedf44b92360f25b2edb4 656 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 7 632 4.6E-202 T 11-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 AL543_01885 07d79f26acdbedf44b92360f25b2edb4 656 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 10 87 1.2E-8 T 11-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 AL543_01885 07d79f26acdbedf44b92360f25b2edb4 656 SMART SM00642 150 539 2.5E-5 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL543_20270 d98f64618486b8401cf587ef8bdf9136 377 SUPERFAMILY SSF64518 1 376 3.01E-99 T 11-10-2018 AL543_20270 d98f64618486b8401cf587ef8bdf9136 377 Gene3D G3DSA:1.20.1330.10 198 328 2.0E-18 T 11-10-2018 AL543_20270 d98f64618486b8401cf587ef8bdf9136 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 2.2E-25 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL543_20270 d98f64618486b8401cf587ef8bdf9136 377 Gene3D G3DSA:1.20.58.1830 5 33 1.4E-73 T 11-10-2018 AL543_20270 d98f64618486b8401cf587ef8bdf9136 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 142 6.0E-42 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL543_20270 d98f64618486b8401cf587ef8bdf9136 377 Gene3D G3DSA:1.10.8.410 329 376 8.8E-20 T 11-10-2018 AL543_20270 d98f64618486b8401cf587ef8bdf9136 377 Gene3D G3DSA:2.170.280.10 178 191 1.4E-73 T 11-10-2018 AL543_20270 d98f64618486b8401cf587ef8bdf9136 377 Gene3D G3DSA:1.20.1330.10 45 177 1.4E-73 T 11-10-2018 AL543_20270 d98f64618486b8401cf587ef8bdf9136 377 Pfam PF07196 Flagellin hook IN motif 194 249 4.2E-12 T 11-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 AL543_20270 d98f64618486b8401cf587ef8bdf9136 377 PRINTS PR00207 Flagellin signature 37 54 1.9E-27 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL543_20270 d98f64618486b8401cf587ef8bdf9136 377 PRINTS PR00207 Flagellin signature 111 134 1.9E-27 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL543_20270 d98f64618486b8401cf587ef8bdf9136 377 PRINTS PR00207 Flagellin signature 76 95 1.9E-27 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL543_06350 7eb74b967118fc30039875fbe507cde0 193 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 3 111 4.3E-16 T 11-10-2018 IPR003111 Lon, substrate-binding domain AL543_06350 7eb74b967118fc30039875fbe507cde0 193 Gene3D G3DSA:2.30.130.40 1 110 6.7E-31 T 11-10-2018 AL543_06350 7eb74b967118fc30039875fbe507cde0 193 SMART SM00464 3 189 2.9E-4 T 11-10-2018 IPR003111 Lon, substrate-binding domain AL543_06350 7eb74b967118fc30039875fbe507cde0 193 SUPERFAMILY SSF88697 3 188 1.84E-48 T 11-10-2018 IPR015947 PUA-like superfamily AL543_07360 b348f1a0da88752505f605d6a658f61a 503 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 349 356 - T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AL543_07360 b348f1a0da88752505f605d6a658f61a 503 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 497 40.694 T 11-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 AL543_07360 b348f1a0da88752505f605d6a658f61a 503 SUPERFAMILY SSF52949 1 184 3.53E-51 T 11-10-2018 AL543_07360 b348f1a0da88752505f605d6a658f61a 503 Gene3D G3DSA:3.40.220.10 1 159 7.3E-60 T 11-10-2018 AL543_07360 b348f1a0da88752505f605d6a658f61a 503 Gene3D G3DSA:3.40.630.10 181 497 2.6E-141 T 11-10-2018 AL543_07360 b348f1a0da88752505f605d6a658f61a 503 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 186 489 3.8E-124 T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AL543_07360 b348f1a0da88752505f605d6a658f61a 503 SUPERFAMILY SSF53187 180 495 1.98E-125 T 11-10-2018 AL543_07360 b348f1a0da88752505f605d6a658f61a 503 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 4.3E-34 T 11-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AL543_07360 b348f1a0da88752505f605d6a658f61a 503 PRINTS PR00481 Cytosol aminopeptidase signature 264 281 1.5E-54 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AL543_07360 b348f1a0da88752505f605d6a658f61a 503 PRINTS PR00481 Cytosol aminopeptidase signature 286 307 1.5E-54 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AL543_07360 b348f1a0da88752505f605d6a658f61a 503 PRINTS PR00481 Cytosol aminopeptidase signature 345 365 1.5E-54 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AL543_07360 b348f1a0da88752505f605d6a658f61a 503 PRINTS PR00481 Cytosol aminopeptidase signature 323 344 1.5E-54 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AL543_07360 b348f1a0da88752505f605d6a658f61a 503 PRINTS PR00481 Cytosol aminopeptidase signature 373 388 1.5E-54 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AL543_03535 ffb171c8c2fd3924dfa6c1cdd3a83147 440 Gene3D G3DSA:3.40.190.10 147 298 1.1E-21 T 11-10-2018 AL543_03535 ffb171c8c2fd3924dfa6c1cdd3a83147 440 Gene3D G3DSA:3.40.190.10 15 146 3.0E-8 T 11-10-2018 AL543_03535 ffb171c8c2fd3924dfa6c1cdd3a83147 440 Pfam PF13343 Bacterial extracellular solute-binding protein 89 299 6.3E-17 T 11-10-2018 AL543_03535 ffb171c8c2fd3924dfa6c1cdd3a83147 440 SUPERFAMILY SSF53850 40 298 1.9E-33 T 11-10-2018 AL543_01080 0c2cde815bd904a06c20e8f8d4401cb9 158 SUPERFAMILY SSF46785 2 62 4.56E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_01080 0c2cde815bd904a06c20e8f8d4401cb9 158 SUPERFAMILY SSF54909 63 148 1.34E-21 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AL543_01080 0c2cde815bd904a06c20e8f8d4401cb9 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 1.4E-14 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL543_01080 0c2cde815bd904a06c20e8f8d4401cb9 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 1.4E-14 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL543_01080 0c2cde815bd904a06c20e8f8d4401cb9 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 1.4E-14 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL543_01080 0c2cde815bd904a06c20e8f8d4401cb9 158 Pfam PF01037 Lrp/AsnC ligand binding domain 69 143 9.5E-23 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AL543_01080 0c2cde815bd904a06c20e8f8d4401cb9 158 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 4.8E-16 T 11-10-2018 AL543_01080 0c2cde815bd904a06c20e8f8d4401cb9 158 SMART SM00344 3 112 3.3E-46 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AL543_01080 0c2cde815bd904a06c20e8f8d4401cb9 158 Gene3D G3DSA:3.30.70.920 55 149 6.8E-27 T 11-10-2018 AL543_01080 0c2cde815bd904a06c20e8f8d4401cb9 158 Gene3D G3DSA:1.10.10.10 1 54 2.6E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_01080 0c2cde815bd904a06c20e8f8d4401cb9 158 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 11-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AL543_10195 b48a836b153c9fa459139f17c082f638 55 Pfam PF00471 Ribosomal protein L33 7 53 5.7E-17 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_10195 b48a836b153c9fa459139f17c082f638 55 SUPERFAMILY SSF57829 1 53 2.69E-19 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 AL543_10195 b48a836b153c9fa459139f17c082f638 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 11-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_10195 b48a836b153c9fa459139f17c082f638 55 Gene3D G3DSA:2.20.28.120 1 55 2.8E-30 T 11-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_10195 b48a836b153c9fa459139f17c082f638 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 14.747 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_10195 b48a836b153c9fa459139f17c082f638 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 2.5E-25 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_18670 34e2739eeb43e134c49a8fe680d7a9da 324 Pfam PF03466 LysR substrate binding domain 91 292 5.4E-38 T 11-10-2018 IPR005119 LysR, substrate-binding AL543_18670 34e2739eeb43e134c49a8fe680d7a9da 324 Gene3D G3DSA:3.40.190.10 167 267 9.6E-98 T 11-10-2018 AL543_18670 34e2739eeb43e134c49a8fe680d7a9da 324 Gene3D G3DSA:1.10.10.10 1 86 3.2E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_18670 34e2739eeb43e134c49a8fe680d7a9da 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 1.9E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_18670 34e2739eeb43e134c49a8fe680d7a9da 324 SUPERFAMILY SSF53850 91 322 4.44E-40 T 11-10-2018 AL543_18670 34e2739eeb43e134c49a8fe680d7a9da 324 SUPERFAMILY SSF46785 1 87 4.42E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_18670 34e2739eeb43e134c49a8fe680d7a9da 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 5.4E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_18670 34e2739eeb43e134c49a8fe680d7a9da 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 5.4E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_18670 34e2739eeb43e134c49a8fe680d7a9da 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 5.4E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_18670 34e2739eeb43e134c49a8fe680d7a9da 324 Gene3D G3DSA:3.40.190.10 93 303 9.6E-98 T 11-10-2018 AL543_10320 879c3eac9905d3ea4ae892720d07d4ab 360 SUPERFAMILY SSF51735 1 260 1.33E-31 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_10320 879c3eac9905d3ea4ae892720d07d4ab 360 Gene3D G3DSA:3.40.50.720 1 311 1.1E-31 T 11-10-2018 AL543_10320 879c3eac9905d3ea4ae892720d07d4ab 360 Pfam PF13460 NAD(P)H-binding 7 170 2.4E-8 T 11-10-2018 IPR016040 NAD(P)-binding domain AL543_07100 7fe0628457556cb033a9a187be774939 126 SUPERFAMILY SSF56214 1 124 4.71E-32 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AL543_07100 7fe0628457556cb033a9a187be774939 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 125 26.873 T 11-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 AL543_07100 7fe0628457556cb033a9a187be774939 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 125 1.6E-44 T 11-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 AL543_07100 7fe0628457556cb033a9a187be774939 126 Gene3D G3DSA:3.90.470.20 1 126 2.0E-42 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AL543_07100 7fe0628457556cb033a9a187be774939 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 120 1.3E-22 T 11-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AL543_07100 7fe0628457556cb033a9a187be774939 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 88 2.0E-35 T 11-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 AL543_07100 7fe0628457556cb033a9a187be774939 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 1 125 2.5E-33 T 11-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 AL543_15235 9cbd16f02d894810c3939ef7637d67c4 440 Gene3D G3DSA:3.30.70.270 260 431 4.4E-49 T 11-10-2018 AL543_15235 9cbd16f02d894810c3939ef7637d67c4 440 SUPERFAMILY SSF49785 41 211 1.02E-7 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily AL543_15235 9cbd16f02d894810c3939ef7637d67c4 440 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 272 429 1.8E-42 T 11-10-2018 IPR000160 GGDEF domain AL543_15235 9cbd16f02d894810c3939ef7637d67c4 440 SUPERFAMILY SSF55073 279 429 6.08E-41 T 11-10-2018 IPR029787 Nucleotide cyclase AL543_15235 9cbd16f02d894810c3939ef7637d67c4 440 Pfam PF00990 Diguanylate cyclase, GGDEF domain 274 426 1.5E-36 T 11-10-2018 IPR000160 GGDEF domain AL543_15235 9cbd16f02d894810c3939ef7637d67c4 440 SMART SM00267 264 430 2.4E-47 T 11-10-2018 IPR000160 GGDEF domain AL543_00095 deb27282800d2d0591fb70112449dfdf 418 SUPERFAMILY SSF142764 3 415 5.49E-135 T 11-10-2018 AL543_00095 deb27282800d2d0591fb70112449dfdf 418 Pfam PF07005 Putative sugar-binding N-terminal domain 3 227 7.6E-72 T 11-10-2018 IPR010737 Four-carbon acid sugar kinase, N-terminal domain AL543_00095 deb27282800d2d0591fb70112449dfdf 418 Gene3D G3DSA:3.40.50.10840 2 235 6.2E-89 T 11-10-2018 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily AL543_00095 deb27282800d2d0591fb70112449dfdf 418 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 254 410 1.2E-41 T 11-10-2018 IPR031475 Four-carbon acid sugar kinase, C-terminal domain AL543_00095 deb27282800d2d0591fb70112449dfdf 418 Gene3D G3DSA:3.40.980.20 242 418 2.6E-63 T 11-10-2018 AL543_18215 23c8f709a1119ce2bdad77ed93bf8dbf 803 Gene3D G3DSA:1.20.1050.60 393 495 3.4E-204 T 11-10-2018 AL543_18215 23c8f709a1119ce2bdad77ed93bf8dbf 803 Pfam PF07971 Glycosyl hydrolase family 92 281 789 2.3E-137 T 11-10-2018 IPR012939 Glycosyl hydrolase family 92 AL543_18215 23c8f709a1119ce2bdad77ed93bf8dbf 803 SUPERFAMILY SSF48208 303 772 1.25E-19 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AL543_18215 23c8f709a1119ce2bdad77ed93bf8dbf 803 Gene3D G3DSA:3.30.2080.10 338 792 3.4E-204 T 11-10-2018 AL543_18215 23c8f709a1119ce2bdad77ed93bf8dbf 803 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 14 790 2.7E-150 T 11-10-2018 IPR005887 Alpha-1,2-mannosidase, putative AL543_18215 23c8f709a1119ce2bdad77ed93bf8dbf 803 Gene3D G3DSA:2.70.98.10 40 392 3.4E-204 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AL543_18215 23c8f709a1119ce2bdad77ed93bf8dbf 803 Gene3D G3DSA:1.20.1610.10 496 665 3.4E-204 T 11-10-2018 AL543_13685 7ef30839fbf9df6f2faf266c57ae929e 543 SMART SM00388 307 373 7.8E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_13685 7ef30839fbf9df6f2faf266c57ae929e 543 SUPERFAMILY SSF47384 290 371 1.35E-14 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL543_13685 7ef30839fbf9df6f2faf266c57ae929e 543 Gene3D G3DSA:3.30.565.10 388 529 1.3E-30 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_13685 7ef30839fbf9df6f2faf266c57ae929e 543 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 420 529 1.2E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_13685 7ef30839fbf9df6f2faf266c57ae929e 543 Gene3D G3DSA:1.10.287.130 258 373 4.7E-23 T 11-10-2018 AL543_13685 7ef30839fbf9df6f2faf266c57ae929e 543 PRINTS PR00344 Bacterial sensor protein C-terminal signature 514 527 9.7E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_13685 7ef30839fbf9df6f2faf266c57ae929e 543 PRINTS PR00344 Bacterial sensor protein C-terminal signature 454 468 9.7E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_13685 7ef30839fbf9df6f2faf266c57ae929e 543 PRINTS PR00344 Bacterial sensor protein C-terminal signature 472 482 9.7E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_13685 7ef30839fbf9df6f2faf266c57ae929e 543 PRINTS PR00344 Bacterial sensor protein C-terminal signature 489 507 9.7E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_13685 7ef30839fbf9df6f2faf266c57ae929e 543 SUPERFAMILY SSF55874 360 536 2.88E-32 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_13685 7ef30839fbf9df6f2faf266c57ae929e 543 SMART SM00387 419 530 4.2E-32 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_13685 7ef30839fbf9df6f2faf266c57ae929e 543 Pfam PF00512 His Kinase A (phospho-acceptor) domain 307 369 1.2E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_13685 7ef30839fbf9df6f2faf266c57ae929e 543 SMART SM00304 254 306 3.3E-5 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_07860 54d51b2574f8ec629635f5ad960ae9e8 821 SUPERFAMILY SSF50249 227 650 9.71E-144 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL543_07860 54d51b2574f8ec629635f5ad960ae9e8 821 TIGRFAM TIGR02063 RNase_R: ribonuclease R 23 734 9.2E-273 T 11-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 AL543_07860 54d51b2574f8ec629635f5ad960ae9e8 821 Pfam PF08206 Ribonuclease B OB domain 91 151 1.4E-20 T 11-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain AL543_07860 54d51b2574f8ec629635f5ad960ae9e8 821 ProSitePatterns PS01175 Ribonuclease II family signature. 562 586 - T 11-10-2018 IPR022966 Ribonuclease II/R, conserved site AL543_07860 54d51b2574f8ec629635f5ad960ae9e8 821 Gene3D G3DSA:2.40.50.140 653 764 2.2E-27 T 11-10-2018 AL543_07860 54d51b2574f8ec629635f5ad960ae9e8 821 SUPERFAMILY SSF50249 651 744 4.7E-23 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL543_07860 54d51b2574f8ec629635f5ad960ae9e8 821 SUPERFAMILY SSF50249 71 154 9.36E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL543_07860 54d51b2574f8ec629635f5ad960ae9e8 821 Pfam PF08461 Ribonuclease R winged-helix domain 26 88 2.3E-12 T 11-10-2018 IPR013668 Ribonuclease R winged-helix domain AL543_07860 54d51b2574f8ec629635f5ad960ae9e8 821 Hamap MF_01895 Ribonuclease R [rnr]. 42 733 60.007 T 11-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 AL543_07860 54d51b2574f8ec629635f5ad960ae9e8 821 SMART SM00316 650 733 9.9E-15 T 11-10-2018 IPR022967 RNA-binding domain, S1 AL543_07860 54d51b2574f8ec629635f5ad960ae9e8 821 Gene3D G3DSA:2.40.50.140 77 155 4.5E-11 T 11-10-2018 AL543_07860 54d51b2574f8ec629635f5ad960ae9e8 821 Pfam PF00773 RNB domain 267 594 1.4E-106 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 AL543_07860 54d51b2574f8ec629635f5ad960ae9e8 821 SMART SM00357 90 152 7.3E-12 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 AL543_07860 54d51b2574f8ec629635f5ad960ae9e8 821 SMART SM00955 267 595 2.2E-186 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 AL543_07860 54d51b2574f8ec629635f5ad960ae9e8 821 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 71 733 3.8E-254 T 11-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 AL543_07860 54d51b2574f8ec629635f5ad960ae9e8 821 SUPERFAMILY SSF50249 145 244 3.3E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL543_07860 54d51b2574f8ec629635f5ad960ae9e8 821 Pfam PF00575 S1 RNA binding domain 650 731 5.4E-14 T 11-10-2018 IPR003029 S1 domain GO:0003676 AL543_08205 a8fd05907ef1785f4a114f6e2495d7da 171 Pfam PF03737 Aldolase/RraA 6 153 3.3E-37 T 11-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AL543_08205 a8fd05907ef1785f4a114f6e2495d7da 171 SUPERFAMILY SSF89562 1 160 3.14E-45 T 11-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily AL543_08205 a8fd05907ef1785f4a114f6e2495d7da 171 Gene3D G3DSA:3.50.30.40 1 161 2.7E-59 T 11-10-2018 AL543_08205 a8fd05907ef1785f4a114f6e2495d7da 171 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 8.8E-68 T 11-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 AL543_08205 a8fd05907ef1785f4a114f6e2495d7da 171 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 159 4.2E-82 T 11-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 AL543_08205 a8fd05907ef1785f4a114f6e2495d7da 171 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 46.97 T 11-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 AL543_03895 37d6f53a573050dbaa0a84a3e0c54399 567 Gene3D G3DSA:3.50.50.60 3 361 2.4E-189 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_03895 37d6f53a573050dbaa0a84a3e0c54399 567 SUPERFAMILY SSF52821 458 563 3.01E-25 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AL543_03895 37d6f53a573050dbaa0a84a3e0c54399 567 SMART SM00450 473 567 1.0E-13 T 11-10-2018 IPR001763 Rhodanese-like domain AL543_03895 37d6f53a573050dbaa0a84a3e0c54399 567 Gene3D G3DSA:3.50.50.60 115 461 2.4E-189 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_03895 37d6f53a573050dbaa0a84a3e0c54399 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 2.3E-23 T 11-10-2018 AL543_03895 37d6f53a573050dbaa0a84a3e0c54399 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 2.3E-23 T 11-10-2018 AL543_03895 37d6f53a573050dbaa0a84a3e0c54399 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 2.3E-23 T 11-10-2018 AL543_03895 37d6f53a573050dbaa0a84a3e0c54399 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 2.3E-23 T 11-10-2018 AL543_03895 37d6f53a573050dbaa0a84a3e0c54399 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 272 2.3E-23 T 11-10-2018 AL543_03895 37d6f53a573050dbaa0a84a3e0c54399 567 SUPERFAMILY SSF55424 344 467 6.19E-35 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AL543_03895 37d6f53a573050dbaa0a84a3e0c54399 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 257 271 2.6E-19 T 11-10-2018 AL543_03895 37d6f53a573050dbaa0a84a3e0c54399 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 2.6E-19 T 11-10-2018 AL543_03895 37d6f53a573050dbaa0a84a3e0c54399 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 2.6E-19 T 11-10-2018 AL543_03895 37d6f53a573050dbaa0a84a3e0c54399 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 153 178 2.6E-19 T 11-10-2018 AL543_03895 37d6f53a573050dbaa0a84a3e0c54399 567 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 328 3.1E-53 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL543_03895 37d6f53a573050dbaa0a84a3e0c54399 567 Gene3D G3DSA:3.40.250.10 471 565 4.8E-25 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AL543_03895 37d6f53a573050dbaa0a84a3e0c54399 567 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 350 451 1.5E-16 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AL543_03895 37d6f53a573050dbaa0a84a3e0c54399 567 Pfam PF00581 Rhodanese-like domain 485 563 1.7E-10 T 11-10-2018 IPR001763 Rhodanese-like domain AL543_03895 37d6f53a573050dbaa0a84a3e0c54399 567 SUPERFAMILY SSF51905 1 338 1.3E-39 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_19260 825f165ff4cdb83b00fe032d32bb5098 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 11-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_19260 825f165ff4cdb83b00fe032d32bb5098 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 2.7E-71 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_19260 825f165ff4cdb83b00fe032d32bb5098 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 2.3E-46 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_19260 825f165ff4cdb83b00fe032d32bb5098 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 2.3E-46 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_19260 825f165ff4cdb83b00fe032d32bb5098 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 2.3E-46 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_19260 825f165ff4cdb83b00fe032d32bb5098 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 2.3E-46 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_19260 825f165ff4cdb83b00fe032d32bb5098 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 2.3E-46 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_19260 825f165ff4cdb83b00fe032d32bb5098 331 SUPERFAMILY SSF55347 149 312 9.67E-81 T 11-10-2018 AL543_19260 825f165ff4cdb83b00fe032d32bb5098 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 1.6E-137 T 11-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_19260 825f165ff4cdb83b00fe032d32bb5098 331 PIRSF PIRSF000149 1 331 5.7E-137 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_19260 825f165ff4cdb83b00fe032d32bb5098 331 Gene3D G3DSA:3.30.360.10 149 314 2.9E-157 T 11-10-2018 AL543_19260 825f165ff4cdb83b00fe032d32bb5098 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 2.1E-40 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_19260 825f165ff4cdb83b00fe032d32bb5098 331 SMART SM00846 3 150 6.2E-98 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_19260 825f165ff4cdb83b00fe032d32bb5098 331 Gene3D G3DSA:3.40.50.720 4 326 2.9E-157 T 11-10-2018 AL543_19260 825f165ff4cdb83b00fe032d32bb5098 331 SUPERFAMILY SSF51735 3 166 4.41E-69 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_17800 2ed6a47152fbb175f152a33fee44700a 625 SMART SM00052 372 619 6.0E-113 T 11-10-2018 IPR001633 EAL domain AL543_17800 2ed6a47152fbb175f152a33fee44700a 625 SUPERFAMILY SSF141868 377 624 6.02E-86 T 11-10-2018 IPR035919 EAL domain superfamily AL543_17800 2ed6a47152fbb175f152a33fee44700a 625 Gene3D G3DSA:3.20.20.450 376 625 3.7E-93 T 11-10-2018 IPR035919 EAL domain superfamily AL543_17800 2ed6a47152fbb175f152a33fee44700a 625 SUPERFAMILY SSF55781 19 164 1.41E-18 T 11-10-2018 AL543_17800 2ed6a47152fbb175f152a33fee44700a 625 Pfam PF00563 EAL domain 379 613 3.3E-72 T 11-10-2018 IPR001633 EAL domain AL543_17800 2ed6a47152fbb175f152a33fee44700a 625 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 204 358 2.7E-25 T 11-10-2018 IPR000160 GGDEF domain AL543_17800 2ed6a47152fbb175f152a33fee44700a 625 Gene3D G3DSA:3.30.450.40 7 166 6.4E-11 T 11-10-2018 IPR029016 GAF-like domain superfamily AL543_17800 2ed6a47152fbb175f152a33fee44700a 625 SMART SM00267 192 362 2.5E-31 T 11-10-2018 IPR000160 GGDEF domain AL543_17800 2ed6a47152fbb175f152a33fee44700a 625 Gene3D G3DSA:3.30.70.270 198 375 1.5E-38 T 11-10-2018 AL543_17800 2ed6a47152fbb175f152a33fee44700a 625 SUPERFAMILY SSF55073 208 356 9.42E-32 T 11-10-2018 IPR029787 Nucleotide cyclase AL543_17800 2ed6a47152fbb175f152a33fee44700a 625 SMART SM00065 14 161 4.6E-4 T 11-10-2018 IPR003018 GAF domain GO:0005515 AL543_17800 2ed6a47152fbb175f152a33fee44700a 625 Pfam PF00990 Diguanylate cyclase, GGDEF domain 204 356 2.8E-35 T 11-10-2018 IPR000160 GGDEF domain AL543_06985 a202e2b9d3cad20ba1a41771d8c44918 948 Gene3D G3DSA:1.10.4050.10 5 113 1.4E-15 T 11-10-2018 AL543_06985 a202e2b9d3cad20ba1a41771d8c44918 948 Gene3D G3DSA:1.20.120.330 289 444 4.0E-58 T 11-10-2018 AL543_06985 a202e2b9d3cad20ba1a41771d8c44918 948 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 34 280 1.8E-99 T 11-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 AL543_06985 a202e2b9d3cad20ba1a41771d8c44918 948 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 557 808 1.3E-99 T 11-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 AL543_06985 a202e2b9d3cad20ba1a41771d8c44918 948 Pfam PF08335 GlnD PII-uridylyltransferase 846 917 1.0E-6 T 11-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AL543_06985 a202e2b9d3cad20ba1a41771d8c44918 948 Pfam PF08335 GlnD PII-uridylyltransferase 301 440 4.2E-48 T 11-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AL543_06985 a202e2b9d3cad20ba1a41771d8c44918 948 SUPERFAMILY SSF81593 821 947 8.63E-30 T 11-10-2018 AL543_06985 a202e2b9d3cad20ba1a41771d8c44918 948 Gene3D G3DSA:3.30.460.10 115 288 4.2E-67 T 11-10-2018 AL543_06985 a202e2b9d3cad20ba1a41771d8c44918 948 Gene3D G3DSA:1.20.120.330 816 948 9.8E-42 T 11-10-2018 AL543_06985 a202e2b9d3cad20ba1a41771d8c44918 948 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 31 948 19.45 T 11-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 AL543_06985 a202e2b9d3cad20ba1a41771d8c44918 948 Gene3D G3DSA:1.20.120.1510 452 565 1.6E-31 T 11-10-2018 AL543_06985 a202e2b9d3cad20ba1a41771d8c44918 948 SUPERFAMILY SSF81301 25 290 1.85E-89 T 11-10-2018 AL543_06985 a202e2b9d3cad20ba1a41771d8c44918 948 SUPERFAMILY SSF81593 291 440 3.14E-46 T 11-10-2018 AL543_06985 a202e2b9d3cad20ba1a41771d8c44918 948 SUPERFAMILY SSF81301 531 819 1.37E-86 T 11-10-2018 AL543_06985 a202e2b9d3cad20ba1a41771d8c44918 948 Gene3D G3DSA:3.30.460.100 566 815 7.8E-92 T 11-10-2018 AL543_08375 88178ceb8df8301898d0bc6e44d809db 692 SUPERFAMILY SSF52540 215 452 5.94E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_08375 88178ceb8df8301898d0bc6e44d809db 692 Gene3D G3DSA:3.40.50.300 456 629 1.6E-53 T 11-10-2018 AL543_08375 88178ceb8df8301898d0bc6e44d809db 692 SMART SM00490 504 588 3.6E-23 T 11-10-2018 IPR001650 Helicase, C-terminal AL543_08375 88178ceb8df8301898d0bc6e44d809db 692 SUPERFAMILY SSF52540 451 653 1.59E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_08375 88178ceb8df8301898d0bc6e44d809db 692 Pfam PF17191 RecG wedge domain 14 170 1.2E-20 T 11-10-2018 IPR033454 RecG, wedge domain AL543_08375 88178ceb8df8301898d0bc6e44d809db 692 SMART SM00487 264 458 1.0E-30 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL543_08375 88178ceb8df8301898d0bc6e44d809db 692 Gene3D G3DSA:2.40.50.140 46 137 3.3E-12 T 11-10-2018 AL543_08375 88178ceb8df8301898d0bc6e44d809db 692 Gene3D G3DSA:3.40.50.300 209 449 5.1E-83 T 11-10-2018 AL543_08375 88178ceb8df8301898d0bc6e44d809db 692 SUPERFAMILY SSF50249 8 173 6.68E-40 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL543_08375 88178ceb8df8301898d0bc6e44d809db 692 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 28 663 3.0E-237 T 11-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 AL543_08375 88178ceb8df8301898d0bc6e44d809db 692 Pfam PF00271 Helicase conserved C-terminal domain 479 587 7.3E-18 T 11-10-2018 IPR001650 Helicase, C-terminal AL543_08375 88178ceb8df8301898d0bc6e44d809db 692 Gene3D G3DSA:1.10.150.20 1 40 2.1E-5 T 11-10-2018 AL543_08375 88178ceb8df8301898d0bc6e44d809db 692 Pfam PF00270 DEAD/DEAH box helicase 271 432 6.6E-19 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL543_17235 1ef9357dd3f85961133771abe632f1ec 477 Pfam PF07690 Major Facilitator Superfamily 18 408 4.9E-53 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL543_17235 1ef9357dd3f85961133771abe632f1ec 477 Gene3D G3DSA:1.20.1720.10 13 249 5.1E-49 T 11-10-2018 AL543_17235 1ef9357dd3f85961133771abe632f1ec 477 ProSitePatterns PS00217 Sugar transport proteins signature 2. 108 133 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AL543_17235 1ef9357dd3f85961133771abe632f1ec 477 SUPERFAMILY SSF103473 4 466 4.32E-60 T 11-10-2018 IPR036259 MFS transporter superfamily AL543_17235 1ef9357dd3f85961133771abe632f1ec 477 Gene3D G3DSA:1.20.1250.20 259 467 3.1E-17 T 11-10-2018 AL543_04735 2f33b8eba9904a3cc307a8048aab9fd2 706 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 115 705 3.4E-199 T 11-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 AL543_04735 2f33b8eba9904a3cc307a8048aab9fd2 706 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 116 705 1.6E-181 T 11-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 AL543_04735 2f33b8eba9904a3cc307a8048aab9fd2 706 SUPERFAMILY SSF51998 121 687 1.4E-194 T 11-10-2018 AL543_04735 2f33b8eba9904a3cc307a8048aab9fd2 706 Pfam PF03477 ATP cone domain 4 89 9.0E-21 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 AL543_04735 2f33b8eba9904a3cc307a8048aab9fd2 706 ProSitePatterns PS00850 Glycine radical domain signature. 676 684 - T 11-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AL543_04735 2f33b8eba9904a3cc307a8048aab9fd2 706 Gene3D G3DSA:3.20.70.20 121 687 1.4E-231 T 11-10-2018 AL543_10710 1369a65724417457ee71566240b2b3c1 1401 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 1.3E-88 T 11-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL543_10710 1369a65724417457ee71566240b2b3c1 1401 Gene3D G3DSA:2.40.50.100 948 1021 4.9E-24 T 11-10-2018 AL543_10710 1369a65724417457ee71566240b2b3c1 1401 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 4.8E-19 T 11-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL543_10710 1369a65724417457ee71566240b2b3c1 1401 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1366 0.0 T 11-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL543_10710 1369a65724417457ee71566240b2b3c1 1401 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 395 4.5E-8 T 11-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL543_10710 1369a65724417457ee71566240b2b3c1 1401 Pfam PF00623 RNA polymerase Rpb1, domain 2 389 485 1.9E-27 T 11-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL543_10710 1369a65724417457ee71566240b2b3c1 1401 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 8.6E-28 T 11-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL543_10710 1369a65724417457ee71566240b2b3c1 1401 Gene3D G3DSA:1.10.274.100 490 640 4.3E-40 T 11-10-2018 AL543_10710 1369a65724417457ee71566240b2b3c1 1401 Gene3D G3DSA:1.10.132.30 641 790 1.9E-65 T 11-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL543_10710 1369a65724417457ee71566240b2b3c1 1401 SUPERFAMILY SSF64484 16 1362 0.0 T 11-10-2018 AL543_10710 1369a65724417457ee71566240b2b3c1 1401 Gene3D G3DSA:1.10.40.90 374 416 3.1E-22 T 11-10-2018 AL543_10710 1369a65724417457ee71566240b2b3c1 1401 Gene3D G3DSA:1.10.1790.20 1135 1313 1.4E-63 T 11-10-2018 AL543_10710 1369a65724417457ee71566240b2b3c1 1401 SMART SM00663 235 514 1.1E-184 T 11-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL543_10710 1369a65724417457ee71566240b2b3c1 1401 Gene3D G3DSA:2.40.50.100 1151 1214 1.4E-63 T 11-10-2018 AL543_10710 1369a65724417457ee71566240b2b3c1 1401 Gene3D G3DSA:2.40.50.100 1022 1126 3.6E-30 T 11-10-2018 AL543_10710 1369a65724417457ee71566240b2b3c1 1401 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1376 18.977 T 11-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL543_10710 1369a65724417457ee71566240b2b3c1 1401 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1314 1.2E-76 T 11-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL543_10710 1369a65724417457ee71566240b2b3c1 1401 Gene3D G3DSA:1.10.150.390 1315 1377 1.1E-28 T 11-10-2018 AL543_08880 547a8ed6b1d2641ee561a03fcaac02cb 830 SUPERFAMILY SSF141868 600 827 1.22E-55 T 11-10-2018 IPR035919 EAL domain superfamily AL543_08880 547a8ed6b1d2641ee561a03fcaac02cb 830 Gene3D G3DSA:3.20.20.450 592 830 1.5E-58 T 11-10-2018 IPR035919 EAL domain superfamily AL543_08880 547a8ed6b1d2641ee561a03fcaac02cb 830 Gene3D G3DSA:3.30.70.270 419 583 2.1E-13 T 11-10-2018 AL543_08880 547a8ed6b1d2641ee561a03fcaac02cb 830 SUPERFAMILY SSF55073 424 577 2.2E-11 T 11-10-2018 IPR029787 Nucleotide cyclase AL543_08880 547a8ed6b1d2641ee561a03fcaac02cb 830 SMART SM00052 593 830 2.9E-41 T 11-10-2018 IPR001633 EAL domain AL543_08880 547a8ed6b1d2641ee561a03fcaac02cb 830 Pfam PF00990 Diguanylate cyclase, GGDEF domain 420 482 3.6E-8 T 11-10-2018 IPR000160 GGDEF domain AL543_08880 547a8ed6b1d2641ee561a03fcaac02cb 830 Pfam PF08495 FIST N domain 30 215 4.2E-21 T 11-10-2018 IPR013702 FIST domain, N-terminal AL543_08880 547a8ed6b1d2641ee561a03fcaac02cb 830 SMART SM00897 27 216 4.8E-29 T 11-10-2018 IPR013702 FIST domain, N-terminal AL543_08880 547a8ed6b1d2641ee561a03fcaac02cb 830 SMART SM00267 407 580 6.4E-4 T 11-10-2018 IPR000160 GGDEF domain AL543_08880 547a8ed6b1d2641ee561a03fcaac02cb 830 Pfam PF00563 EAL domain 600 826 1.1E-57 T 11-10-2018 IPR001633 EAL domain AL543_08880 547a8ed6b1d2641ee561a03fcaac02cb 830 SMART SM01204 217 345 3.1E-10 T 11-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AL543_13985 ea71c1d0bcd7041ea5467cbe45a1ce60 285 Gene3D G3DSA:3.30.1400.10 143 283 4.0E-49 T 11-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 AL543_13985 ea71c1d0bcd7041ea5467cbe45a1ce60 285 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 3 275 1.1E-103 T 11-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 AL543_13985 ea71c1d0bcd7041ea5467cbe45a1ce60 285 SUPERFAMILY SSF64383 147 281 5.1E-49 T 11-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 AL543_13985 ea71c1d0bcd7041ea5467cbe45a1ce60 285 SMART SM00771 145 275 3.0E-73 T 11-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 AL543_13985 ea71c1d0bcd7041ea5467cbe45a1ce60 285 Hamap MF_00509 Cell division protein ZipA [zipA]. 2 277 22.796 T 11-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 AL543_13985 ea71c1d0bcd7041ea5467cbe45a1ce60 285 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 148 279 6.0E-72 T 11-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 AL543_13985 ea71c1d0bcd7041ea5467cbe45a1ce60 285 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 148 274 6.7E-46 T 11-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 AL543_12955 99f8b65a7706703c453a80ff3aa2ed53 404 PIRSF PIRSF005572 2 384 4.9E-139 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 AL543_12955 99f8b65a7706703c453a80ff3aa2ed53 404 Pfam PF00266 Aminotransferase class-V 5 368 9.5E-89 T 11-10-2018 IPR000192 Aminotransferase class V domain AL543_12955 99f8b65a7706703c453a80ff3aa2ed53 404 SUPERFAMILY SSF53383 5 391 4.3E-116 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL543_12955 99f8b65a7706703c453a80ff3aa2ed53 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 1.3E-231 T 11-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 AL543_12955 99f8b65a7706703c453a80ff3aa2ed53 404 Gene3D G3DSA:3.90.1150.10 5 375 1.1E-168 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL543_12955 99f8b65a7706703c453a80ff3aa2ed53 404 Gene3D G3DSA:3.40.640.10 16 262 1.1E-168 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL543_12955 99f8b65a7706703c453a80ff3aa2ed53 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AL543_12955 99f8b65a7706703c453a80ff3aa2ed53 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 54.151 T 11-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 AL543_10895 dd2da048f374401248c2c8b154d7ea2f 91 Gene3D G3DSA:3.40.1260.10 1 91 2.9E-21 T 11-10-2018 IPR027396 DsrEFH-like AL543_10895 dd2da048f374401248c2c8b154d7ea2f 91 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 2 91 3.6E-23 T 11-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 AL543_10895 dd2da048f374401248c2c8b154d7ea2f 91 Pfam PF04077 DsrH like protein 10 87 1.4E-20 T 11-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 AL543_10895 dd2da048f374401248c2c8b154d7ea2f 91 SUPERFAMILY SSF75169 1 91 1.46E-20 T 11-10-2018 IPR027396 DsrEFH-like AL543_08765 61fbbe951a9e5585620202d23b31803c 1040 SMART SM00487 269 480 6.6E-15 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL543_08765 61fbbe951a9e5585620202d23b31803c 1040 Gene3D G3DSA:3.90.1570.50 30 265 3.1E-94 T 11-10-2018 AL543_08765 61fbbe951a9e5585620202d23b31803c 1040 SUPERFAMILY SSF52540 305 710 4.93E-8 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_08765 61fbbe951a9e5585620202d23b31803c 1040 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 30 220 7.9E-50 T 11-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 AL543_08765 61fbbe951a9e5585620202d23b31803c 1040 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 34 725 1.8E-208 T 11-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 AL543_08765 61fbbe951a9e5585620202d23b31803c 1040 Gene3D G3DSA:3.40.50.300 272 463 4.2E-74 T 11-10-2018 AL543_08765 61fbbe951a9e5585620202d23b31803c 1040 Pfam PF04851 Type III restriction enzyme, res subunit 272 440 1.4E-37 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AL543_08765 61fbbe951a9e5585620202d23b31803c 1040 Gene3D G3DSA:3.40.50.300 464 732 1.1E-106 T 11-10-2018 AL543_08765 61fbbe951a9e5585620202d23b31803c 1040 Pfam PF12008 Type I restriction and modification enzyme - subunit R C terminal 729 1033 9.5E-66 T 11-10-2018 IPR022625 Type-1 restriction enzyme R protein, C-terminal AL543_08765 61fbbe951a9e5585620202d23b31803c 1040 Gene3D G3DSA:1.10.10.2110 796 837 1.0E-73 T 11-10-2018 AL543_08765 61fbbe951a9e5585620202d23b31803c 1040 Gene3D G3DSA:1.20.58.2040 733 887 1.0E-73 T 11-10-2018 AL543_08765 61fbbe951a9e5585620202d23b31803c 1040 SUPERFAMILY SSF52540 230 444 1.46E-30 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_08765 61fbbe951a9e5585620202d23b31803c 1040 Gene3D G3DSA:3.90.640.50 57 129 3.1E-94 T 11-10-2018 AL543_08765 61fbbe951a9e5585620202d23b31803c 1040 ProDom PD047574 TYPE I RESTRICTION HYDROLASE DEOXYRIBONUCLEASE SITE-SPECIFIC HSDR ENZYME SYSTEM ENDONUCLEASE 838 874 2.0E-10 T 11-10-2018 AL543_00500 a029113fc66e74104264f043b03e6df1 623 Pfam PF00672 HAMP domain 292 342 2.0E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_00500 a029113fc66e74104264f043b03e6df1 623 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 408 589 2.7E-43 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_00500 a029113fc66e74104264f043b03e6df1 623 Gene3D G3DSA:1.10.287.950 292 623 2.1E-68 T 11-10-2018 AL543_00500 a029113fc66e74104264f043b03e6df1 623 Gene3D G3DSA:3.30.450.20 62 173 9.1E-86 T 11-10-2018 AL543_00500 a029113fc66e74104264f043b03e6df1 623 SMART SM00283 361 622 2.3E-78 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_00500 a029113fc66e74104264f043b03e6df1 623 SMART SM00304 292 346 1.4E-9 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_00500 a029113fc66e74104264f043b03e6df1 623 SMART SM00304 374 441 26.0 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_00500 a029113fc66e74104264f043b03e6df1 623 SUPERFAMILY SSF58104 314 623 2.09E-73 T 11-10-2018 AL543_00500 a029113fc66e74104264f043b03e6df1 623 SUPERFAMILY SSF103190 61 184 6.02E-19 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily AL543_00500 a029113fc66e74104264f043b03e6df1 623 Pfam PF02743 Cache domain 40 255 6.6E-32 T 11-10-2018 IPR033479 Double Cache domain 1 AL543_00500 a029113fc66e74104264f043b03e6df1 623 Gene3D G3DSA:3.30.450.20 49 266 9.1E-86 T 11-10-2018 AL543_10825 b8a3dda797f6c903536d6b03392cdf54 584 Pfam PF01476 LysM domain 487 529 2.5E-10 T 11-10-2018 IPR018392 LysM domain AL543_10825 b8a3dda797f6c903536d6b03392cdf54 584 Pfam PF01476 LysM domain 423 465 5.0E-11 T 11-10-2018 IPR018392 LysM domain AL543_10825 b8a3dda797f6c903536d6b03392cdf54 584 Pfam PF01476 LysM domain 540 582 2.2E-12 T 11-10-2018 IPR018392 LysM domain AL543_10825 b8a3dda797f6c903536d6b03392cdf54 584 Pfam PF11741 AMIN domain 42 143 1.6E-16 T 11-10-2018 IPR021731 AMIN domain AL543_10825 b8a3dda797f6c903536d6b03392cdf54 584 SUPERFAMILY SSF54106 485 529 4.71E-9 T 11-10-2018 AL543_10825 b8a3dda797f6c903536d6b03392cdf54 584 SUPERFAMILY SSF54106 422 465 4.84E-10 T 11-10-2018 AL543_10825 b8a3dda797f6c903536d6b03392cdf54 584 Gene3D G3DSA:3.10.350.10 538 584 3.0E-15 T 11-10-2018 IPR036779 LysM domain superfamily AL543_10825 b8a3dda797f6c903536d6b03392cdf54 584 Gene3D G3DSA:3.10.350.10 474 537 1.7E-14 T 11-10-2018 IPR036779 LysM domain superfamily AL543_10825 b8a3dda797f6c903536d6b03392cdf54 584 Gene3D G3DSA:3.10.350.10 415 471 8.6E-14 T 11-10-2018 IPR036779 LysM domain superfamily AL543_10825 b8a3dda797f6c903536d6b03392cdf54 584 Gene3D G3DSA:3.40.630.40 168 410 1.9E-67 T 11-10-2018 AL543_10825 b8a3dda797f6c903536d6b03392cdf54 584 Gene3D G3DSA:2.60.40.3500 33 146 1.9E-24 T 11-10-2018 AL543_10825 b8a3dda797f6c903536d6b03392cdf54 584 SMART SM00257 486 529 4.2E-14 T 11-10-2018 IPR018392 LysM domain AL543_10825 b8a3dda797f6c903536d6b03392cdf54 584 SMART SM00257 422 465 3.4E-13 T 11-10-2018 IPR018392 LysM domain AL543_10825 b8a3dda797f6c903536d6b03392cdf54 584 SMART SM00257 539 582 2.7E-12 T 11-10-2018 IPR018392 LysM domain AL543_10825 b8a3dda797f6c903536d6b03392cdf54 584 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 182 401 5.9E-48 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AL543_10825 b8a3dda797f6c903536d6b03392cdf54 584 SUPERFAMILY SSF53187 180 404 1.6E-50 T 11-10-2018 AL543_10825 b8a3dda797f6c903536d6b03392cdf54 584 SMART SM00646 242 401 1.1E-65 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AL543_10825 b8a3dda797f6c903536d6b03392cdf54 584 SUPERFAMILY SSF54106 539 582 1.96E-10 T 11-10-2018 AL543_06730 6a9fa10f0264a5e70e3285f7fc80ee58 1076 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1052 0.0 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL543_06730 6a9fa10f0264a5e70e3285f7fc80ee58 1076 Gene3D G3DSA:3.40.50.1380 937 1072 2.5E-34 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AL543_06730 6a9fa10f0264a5e70e3285f7fc80ee58 1076 SMART SM00851 955 1041 1.2E-27 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain AL543_06730 6a9fa10f0264a5e70e3285f7fc80ee58 1076 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1067 13.408 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL543_06730 6a9fa10f0264a5e70e3285f7fc80ee58 1076 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL543_06730 6a9fa10f0264a5e70e3285f7fc80ee58 1076 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL543_06730 6a9fa10f0264a5e70e3285f7fc80ee58 1076 Gene3D G3DSA:3.40.50.20 1 116 3.0E-50 T 11-10-2018 AL543_06730 6a9fa10f0264a5e70e3285f7fc80ee58 1076 SUPERFAMILY SSF56059 128 401 5.66E-109 T 11-10-2018 AL543_06730 6a9fa10f0264a5e70e3285f7fc80ee58 1076 Gene3D G3DSA:3.30.470.20 119 403 2.7E-129 T 11-10-2018 AL543_06730 6a9fa10f0264a5e70e3285f7fc80ee58 1076 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 1.6E-72 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL543_06730 6a9fa10f0264a5e70e3285f7fc80ee58 1076 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 875 1.8E-37 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL543_06730 6a9fa10f0264a5e70e3285f7fc80ee58 1076 SMART SM01096 424 547 5.0E-78 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL543_06730 6a9fa10f0264a5e70e3285f7fc80ee58 1076 Gene3D G3DSA:1.10.1030.10 404 553 1.6E-53 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL543_06730 6a9fa10f0264a5e70e3285f7fc80ee58 1076 Gene3D G3DSA:3.40.50.20 554 662 1.4E-49 T 11-10-2018 AL543_06730 6a9fa10f0264a5e70e3285f7fc80ee58 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 3.1E-64 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL543_06730 6a9fa10f0264a5e70e3285f7fc80ee58 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 3.1E-64 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL543_06730 6a9fa10f0264a5e70e3285f7fc80ee58 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 3.1E-64 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL543_06730 6a9fa10f0264a5e70e3285f7fc80ee58 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 3.1E-64 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL543_06730 6a9fa10f0264a5e70e3285f7fc80ee58 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 3.1E-64 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL543_06730 6a9fa10f0264a5e70e3285f7fc80ee58 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 3.1E-64 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL543_06730 6a9fa10f0264a5e70e3285f7fc80ee58 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 3.1E-64 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL543_06730 6a9fa10f0264a5e70e3285f7fc80ee58 1076 SUPERFAMILY SSF52335 937 1071 3.66E-35 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AL543_06730 6a9fa10f0264a5e70e3285f7fc80ee58 1076 SUPERFAMILY SSF52440 1 127 7.77E-50 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AL543_06730 6a9fa10f0264a5e70e3285f7fc80ee58 1076 Pfam PF02142 MGS-like domain 956 1041 3.6E-17 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain AL543_06730 6a9fa10f0264a5e70e3285f7fc80ee58 1076 SUPERFAMILY SSF52440 556 675 1.73E-49 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AL543_06730 6a9fa10f0264a5e70e3285f7fc80ee58 1076 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL543_06730 6a9fa10f0264a5e70e3285f7fc80ee58 1076 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 4.9E-42 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL543_06730 6a9fa10f0264a5e70e3285f7fc80ee58 1076 SUPERFAMILY SSF56059 673 932 8.31E-105 T 11-10-2018 AL543_06730 6a9fa10f0264a5e70e3285f7fc80ee58 1076 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1062 13.138 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL543_06730 6a9fa10f0264a5e70e3285f7fc80ee58 1076 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL543_06730 6a9fa10f0264a5e70e3285f7fc80ee58 1076 Gene3D G3DSA:3.30.470.20 665 935 1.7E-125 T 11-10-2018 AL543_06730 6a9fa10f0264a5e70e3285f7fc80ee58 1076 SUPERFAMILY SSF48108 396 554 4.32E-53 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL543_15350 729a4df02465cd035dc8b9ee19eed603 188 SUPERFAMILY SSF50104 1 65 2.11E-10 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily AL543_15350 729a4df02465cd035dc8b9ee19eed603 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 124 4.5E-14 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AL543_15350 729a4df02465cd035dc8b9ee19eed603 188 SUPERFAMILY SSF50249 132 188 4.63E-15 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL543_15350 729a4df02465cd035dc8b9ee19eed603 188 Gene3D G3DSA:2.40.50.140 67 130 1.3E-15 T 11-10-2018 AL543_15350 729a4df02465cd035dc8b9ee19eed603 188 Gene3D G3DSA:2.30.30.30 1 65 5.9E-13 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 AL543_15350 729a4df02465cd035dc8b9ee19eed603 188 Pfam PF09285 Elongation factor P, C-terminal 132 187 4.7E-19 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AL543_15350 729a4df02465cd035dc8b9ee19eed603 188 SUPERFAMILY SSF50249 67 129 3.13E-12 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL543_15350 729a4df02465cd035dc8b9ee19eed603 188 SMART SM00841 132 187 4.0E-26 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AL543_15350 729a4df02465cd035dc8b9ee19eed603 188 Gene3D G3DSA:2.40.50.140 131 188 9.9E-20 T 11-10-2018 AL543_15350 729a4df02465cd035dc8b9ee19eed603 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 61 3.5E-15 T 11-10-2018 IPR013185 Translation elongation factor, KOW-like AL543_15350 729a4df02465cd035dc8b9ee19eed603 188 SMART SM01185 69 124 1.1E-15 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AL543_15350 729a4df02465cd035dc8b9ee19eed603 188 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 188 41.862 T 11-10-2018 IPR011897 Translation elongation factor P-like, YeiP AL543_15350 729a4df02465cd035dc8b9ee19eed603 188 ProSitePatterns PS01275 Elongation factor P signature. 153 172 - T 11-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site AL543_15350 729a4df02465cd035dc8b9ee19eed603 188 PIRSF PIRSF005901 1 188 1.5E-60 T 11-10-2018 IPR020599 Translation elongation factor P/YeiP AL543_15350 729a4df02465cd035dc8b9ee19eed603 188 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 188 4.6E-103 T 11-10-2018 IPR011897 Translation elongation factor P-like, YeiP AL543_07240 3e97f6316ae37b627db7084764e86b38 321 SUPERFAMILY SSF46785 24 101 2.95E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_07240 3e97f6316ae37b627db7084764e86b38 321 Gene3D G3DSA:1.10.10.10 16 106 3.0E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_07240 3e97f6316ae37b627db7084764e86b38 321 Gene3D G3DSA:3.40.190.10 189 285 9.5E-40 T 11-10-2018 AL543_07240 3e97f6316ae37b627db7084764e86b38 321 Pfam PF03466 LysR substrate binding domain 120 310 1.7E-22 T 11-10-2018 IPR005119 LysR, substrate-binding AL543_07240 3e97f6316ae37b627db7084764e86b38 321 Gene3D G3DSA:3.40.190.10 110 309 9.5E-40 T 11-10-2018 AL543_07240 3e97f6316ae37b627db7084764e86b38 321 SUPERFAMILY SSF53850 108 311 1.81E-38 T 11-10-2018 AL543_07240 3e97f6316ae37b627db7084764e86b38 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 53 63 1.4E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_07240 3e97f6316ae37b627db7084764e86b38 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 63 74 1.4E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_07240 3e97f6316ae37b627db7084764e86b38 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.4E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_07240 3e97f6316ae37b627db7084764e86b38 321 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 27 86 1.3E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_18765 0b1bcf8018af869a2c282600fac8cdf1 506 Gene3D G3DSA:3.40.50.2300 1 132 3.1E-29 T 11-10-2018 AL543_18765 0b1bcf8018af869a2c282600fac8cdf1 506 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL543_18765 0b1bcf8018af869a2c282600fac8cdf1 506 Gene3D G3DSA:1.10.10.60 454 495 2.8E-8 T 11-10-2018 AL543_18765 0b1bcf8018af869a2c282600fac8cdf1 506 Gene3D G3DSA:3.40.50.300 133 313 3.5E-64 T 11-10-2018 AL543_18765 0b1bcf8018af869a2c282600fac8cdf1 506 SUPERFAMILY SSF52540 142 385 4.42E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_18765 0b1bcf8018af869a2c282600fac8cdf1 506 Pfam PF02954 Bacterial regulatory protein, Fis family 458 494 7.0E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL543_18765 0b1bcf8018af869a2c282600fac8cdf1 506 SMART SM00382 162 304 5.5E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_18765 0b1bcf8018af869a2c282600fac8cdf1 506 SUPERFAMILY SSF52172 4 186 2.42E-36 T 11-10-2018 IPR011006 CheY-like superfamily AL543_18765 0b1bcf8018af869a2c282600fac8cdf1 506 SUPERFAMILY SSF46689 355 494 2.55E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_18765 0b1bcf8018af869a2c282600fac8cdf1 506 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AL543_18765 0b1bcf8018af869a2c282600fac8cdf1 506 Pfam PF00072 Response regulator receiver domain 5 114 1.2E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_18765 0b1bcf8018af869a2c282600fac8cdf1 506 Pfam PF00158 Sigma-54 interaction domain 143 309 7.3E-69 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL543_18765 0b1bcf8018af869a2c282600fac8cdf1 506 SMART SM00448 3 114 1.2E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_18765 0b1bcf8018af869a2c282600fac8cdf1 506 Gene3D G3DSA:1.10.8.60 314 393 1.3E-26 T 11-10-2018 AL543_17130 27a19d87d359dc9bf42c5ec438ffe202 135 Pfam PF02657 Fe-S metabolism associated domain 8 127 9.4E-46 T 11-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like AL543_17130 27a19d87d359dc9bf42c5ec438ffe202 135 Gene3D G3DSA:3.90.1010.10 1 135 1.2E-51 T 11-10-2018 AL543_17130 27a19d87d359dc9bf42c5ec438ffe202 135 SUPERFAMILY SSF82649 3 131 2.62E-46 T 11-10-2018 AL543_05760 7f53d68bf9ac2154a07b6aaf07687d95 856 Pfam PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain 30 309 1.2E-31 T 11-10-2018 IPR012970 Polysaccharide lyase 8, N-terminal alpha-helical AL543_05760 7f53d68bf9ac2154a07b6aaf07687d95 856 Gene3D G3DSA:1.50.10.100 39 328 1.2E-61 T 11-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 AL543_05760 7f53d68bf9ac2154a07b6aaf07687d95 856 Gene3D G3DSA:2.60.220.10 581 683 1.3E-16 T 11-10-2018 IPR011071 Polysaccharide lyase family 8-like, C-terminal GO:0005975 AL543_05760 7f53d68bf9ac2154a07b6aaf07687d95 856 Gene3D G3DSA:2.70.98.10 330 580 2.0E-72 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AL543_05760 7f53d68bf9ac2154a07b6aaf07687d95 856 SUPERFAMILY SSF74650 330 584 8.37E-75 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 AL543_05760 7f53d68bf9ac2154a07b6aaf07687d95 856 SUPERFAMILY SSF48230 25 340 1.98E-64 T 11-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 AL543_05760 7f53d68bf9ac2154a07b6aaf07687d95 856 Pfam PF02278 Polysaccharide lyase family 8, super-sandwich domain 333 572 2.0E-67 T 11-10-2018 IPR003159 Polysaccharide lyase family 8, central domain GO:0005576|GO:0016829 AL543_05760 7f53d68bf9ac2154a07b6aaf07687d95 856 SUPERFAMILY SSF49863 587 684 6.08E-13 T 11-10-2018 IPR011071 Polysaccharide lyase family 8-like, C-terminal GO:0005975 AL543_05760 7f53d68bf9ac2154a07b6aaf07687d95 856 Pfam PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain 589 649 1.1E-10 T 11-10-2018 IPR004103 Polysaccharide lyase family 8, C-terminal GO:0005576|GO:0016829 AL543_12100 4f57d30b4ca93f135963e718f2547e9e 296 Gene3D G3DSA:3.40.50.620 3 282 3.2E-107 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL543_12100 4f57d30b4ca93f135963e718f2547e9e 296 SUPERFAMILY SSF52374 3 282 9.01E-85 T 11-10-2018 AL543_12100 4f57d30b4ca93f135963e718f2547e9e 296 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 3 288 39.893 T 11-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 AL543_12100 4f57d30b4ca93f135963e718f2547e9e 296 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 3 269 1.5E-112 T 11-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 AL543_12100 4f57d30b4ca93f135963e718f2547e9e 296 Gene3D G3DSA:3.40.50.620 78 216 3.2E-107 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL543_12100 4f57d30b4ca93f135963e718f2547e9e 296 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 5.6E-14 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AL543_12100 4f57d30b4ca93f135963e718f2547e9e 296 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 5.6E-14 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AL543_12100 4f57d30b4ca93f135963e718f2547e9e 296 PRINTS PR00987 Glutamyl-tRNA synthetase signature 184 192 5.6E-14 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AL543_12100 4f57d30b4ca93f135963e718f2547e9e 296 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 5.6E-14 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AL543_12100 4f57d30b4ca93f135963e718f2547e9e 296 PRINTS PR00987 Glutamyl-tRNA synthetase signature 168 178 5.6E-14 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AL543_12100 4f57d30b4ca93f135963e718f2547e9e 296 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 6 236 5.2E-44 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 AL543_10555 ab9aeab9fc42127464560d19068780d3 419 SMART SM00357 52 118 1.2E-17 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 AL543_10555 ab9aeab9fc42127464560d19068780d3 419 SMART SM00959 5 47 1.3E-18 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 AL543_10555 ab9aeab9fc42127464560d19068780d3 419 Gene3D G3DSA:2.40.50.140 48 117 4.7E-35 T 11-10-2018 AL543_10555 ab9aeab9fc42127464560d19068780d3 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 8.0E-18 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 AL543_10555 ab9aeab9fc42127464560d19068780d3 419 SUPERFAMILY SSF50249 48 125 4.97E-29 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL543_10555 ab9aeab9fc42127464560d19068780d3 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 251.988 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 AL543_10555 ab9aeab9fc42127464560d19068780d3 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 5.6E-32 T 11-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 AL543_10555 ab9aeab9fc42127464560d19068780d3 419 SUPERFAMILY SSF52540 90 371 1.75E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_10555 ab9aeab9fc42127464560d19068780d3 419 Gene3D G3DSA:1.10.720.10 1 47 1.7E-23 T 11-10-2018 AL543_10555 ab9aeab9fc42127464560d19068780d3 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 2.7E-220 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 AL543_10555 ab9aeab9fc42127464560d19068780d3 419 SUPERFAMILY SSF68912 1 46 4.71E-12 T 11-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily AL543_10555 ab9aeab9fc42127464560d19068780d3 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 1.7E-23 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL543_10555 ab9aeab9fc42127464560d19068780d3 419 SMART SM00382 170 355 1.0E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_10555 ab9aeab9fc42127464560d19068780d3 419 Gene3D G3DSA:3.40.50.300 130 417 2.5E-134 T 11-10-2018 AL543_06855 9479ffd7e0295a73ef2a727a397c31d4 634 SUPERFAMILY SSF47005 320 365 1.57E-12 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AL543_06855 9479ffd7e0295a73ef2a727a397c31d4 634 Gene3D G3DSA:2.40.50.100 110 186 6.7E-20 T 11-10-2018 AL543_06855 9479ffd7e0295a73ef2a727a397c31d4 634 Pfam PF00364 Biotin-requiring enzyme 10 79 5.4E-20 T 11-10-2018 IPR000089 Biotin/lipoyl attachment AL543_06855 9479ffd7e0295a73ef2a727a397c31d4 634 Pfam PF00364 Biotin-requiring enzyme 210 280 1.1E-20 T 11-10-2018 IPR000089 Biotin/lipoyl attachment AL543_06855 9479ffd7e0295a73ef2a727a397c31d4 634 Pfam PF00364 Biotin-requiring enzyme 110 180 8.3E-21 T 11-10-2018 IPR000089 Biotin/lipoyl attachment AL543_06855 9479ffd7e0295a73ef2a727a397c31d4 634 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 195 634 3.6E-205 T 11-10-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 AL543_06855 9479ffd7e0295a73ef2a727a397c31d4 634 SUPERFAMILY SSF52777 392 633 7.12E-83 T 11-10-2018 AL543_06855 9479ffd7e0295a73ef2a727a397c31d4 634 Gene3D G3DSA:3.30.559.10 387 634 1.2E-97 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AL543_06855 9479ffd7e0295a73ef2a727a397c31d4 634 SUPERFAMILY SSF51230 109 200 2.22E-22 T 11-10-2018 IPR011053 Single hybrid motif AL543_06855 9479ffd7e0295a73ef2a727a397c31d4 634 Gene3D G3DSA:2.40.50.100 209 286 2.2E-20 T 11-10-2018 AL543_06855 9479ffd7e0295a73ef2a727a397c31d4 634 Gene3D G3DSA:2.40.50.100 7 86 1.2E-20 T 11-10-2018 AL543_06855 9479ffd7e0295a73ef2a727a397c31d4 634 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 403 633 1.4E-80 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 AL543_06855 9479ffd7e0295a73ef2a727a397c31d4 634 SUPERFAMILY SSF51230 6 98 2.62E-23 T 11-10-2018 IPR011053 Single hybrid motif AL543_06855 9479ffd7e0295a73ef2a727a397c31d4 634 Pfam PF02817 e3 binding domain 327 361 6.5E-15 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 AL543_06855 9479ffd7e0295a73ef2a727a397c31d4 634 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 232 261 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AL543_06855 9479ffd7e0295a73ef2a727a397c31d4 634 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 31 60 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AL543_06855 9479ffd7e0295a73ef2a727a397c31d4 634 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 132 161 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AL543_06855 9479ffd7e0295a73ef2a727a397c31d4 634 Gene3D G3DSA:4.10.320.10 327 371 1.9E-21 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AL543_06855 9479ffd7e0295a73ef2a727a397c31d4 634 SUPERFAMILY SSF51230 208 301 1.28E-22 T 11-10-2018 IPR011053 Single hybrid motif AL543_14870 0eed76d343fe67a8cec6b12c781b4a6f 384 Gene3D G3DSA:3.40.640.10 59 283 8.4E-122 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL543_14870 0eed76d343fe67a8cec6b12c781b4a6f 384 Gene3D G3DSA:3.90.1150.10 43 372 8.4E-122 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL543_14870 0eed76d343fe67a8cec6b12c781b4a6f 384 SUPERFAMILY SSF53383 5 379 1.32E-95 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL543_14870 0eed76d343fe67a8cec6b12c781b4a6f 384 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 22 377 2.3E-141 T 11-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 AL543_14870 0eed76d343fe67a8cec6b12c781b4a6f 384 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 232 241 - T 11-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 AL543_14870 0eed76d343fe67a8cec6b12c781b4a6f 384 Pfam PF00155 Aminotransferase class I and II 43 374 3.9E-53 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL543_14870 0eed76d343fe67a8cec6b12c781b4a6f 384 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 5 380 46.798 T 11-10-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 AL543_12030 45d450c8b3b2ce185d2486f88d86e7b7 196 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 33.769 T 11-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 AL543_12030 45d450c8b3b2ce185d2486f88d86e7b7 196 SUPERFAMILY SSF53697 1 191 2.83E-56 T 11-10-2018 AL543_12030 45d450c8b3b2ce185d2486f88d86e7b7 196 Pfam PF13580 SIS domain 9 144 1.4E-34 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL543_12030 45d450c8b3b2ce185d2486f88d86e7b7 196 Gene3D G3DSA:3.40.50.10490 1 195 3.7E-71 T 11-10-2018 AL543_08495 1afad7d880f0ec340c4d534655e80735 146 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 30 6.9E-9 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL543_08495 1afad7d880f0ec340c4d534655e80735 146 Gene3D G3DSA:3.30.700.10 32 140 2.7E-44 T 11-10-2018 AL543_08495 1afad7d880f0ec340c4d534655e80735 146 SUPERFAMILY SSF54523 35 141 5.76E-38 T 11-10-2018 AL543_08495 1afad7d880f0ec340c4d534655e80735 146 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 9 141 5.6E-58 T 11-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 AL543_08495 1afad7d880f0ec340c4d534655e80735 146 Pfam PF08334 Type II secretion system (T2SS), protein G 32 140 8.6E-43 T 11-10-2018 IPR013545 Type II secretion system protein G AL543_08495 1afad7d880f0ec340c4d534655e80735 146 PRINTS PR00813 Bacterial general secretion pathway protein G signature 9 34 2.9E-22 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AL543_08495 1afad7d880f0ec340c4d534655e80735 146 PRINTS PR00813 Bacterial general secretion pathway protein G signature 45 63 2.9E-22 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AL543_08495 1afad7d880f0ec340c4d534655e80735 146 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL543_08495 1afad7d880f0ec340c4d534655e80735 146 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 29 4.2E-10 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL543_07490 feec21be565deb6802357de2edfecb18 326 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 48 316 2.2E-116 T 11-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 AL543_07490 feec21be565deb6802357de2edfecb18 326 SMART SM00116 278 325 0.051 T 11-10-2018 IPR000644 CBS domain AL543_07490 feec21be565deb6802357de2edfecb18 326 SMART SM00116 213 261 0.42 T 11-10-2018 IPR000644 CBS domain AL543_07490 feec21be565deb6802357de2edfecb18 326 SUPERFAMILY SSF53697 9 322 5.78E-70 T 11-10-2018 AL543_07490 feec21be565deb6802357de2edfecb18 326 Gene3D G3DSA:3.40.50.10490 7 198 5.6E-66 T 11-10-2018 AL543_07490 feec21be565deb6802357de2edfecb18 326 Gene3D G3DSA:3.10.580.10 199 323 2.3E-44 T 11-10-2018 AL543_07490 feec21be565deb6802357de2edfecb18 326 Pfam PF01380 SIS domain 44 175 1.3E-32 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL543_07490 feec21be565deb6802357de2edfecb18 326 Pfam PF00571 CBS domain 206 261 1.3E-5 T 11-10-2018 IPR000644 CBS domain AL543_07490 feec21be565deb6802357de2edfecb18 326 Pfam PF00571 CBS domain 272 323 9.6E-7 T 11-10-2018 IPR000644 CBS domain AL543_07490 feec21be565deb6802357de2edfecb18 326 PIRSF PIRSF004692 2 326 7.4E-132 T 11-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 AL543_11585 a23ba4dd586dbc4f4cd3e0273f0d56a1 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 2 242 5.7E-84 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 AL543_11585 a23ba4dd586dbc4f4cd3e0273f0d56a1 243 Gene3D G3DSA:2.40.240.20 1 70 1.8E-21 T 11-10-2018 AL543_11585 a23ba4dd586dbc4f4cd3e0273f0d56a1 243 PIRSF PIRSF015601 2 242 1.6E-54 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 AL543_11585 a23ba4dd586dbc4f4cd3e0273f0d56a1 243 Gene3D G3DSA:3.40.1280.10 74 243 4.5E-66 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL543_11585 a23ba4dd586dbc4f4cd3e0273f0d56a1 243 SUPERFAMILY SSF88697 2 70 1.54E-16 T 11-10-2018 IPR015947 PUA-like superfamily AL543_11585 a23ba4dd586dbc4f4cd3e0273f0d56a1 243 Pfam PF04452 RNA methyltransferase 19 236 1.3E-72 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 AL543_11585 a23ba4dd586dbc4f4cd3e0273f0d56a1 243 SUPERFAMILY SSF75217 75 242 6.11E-52 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AL543_02060 be268e24f94a12dd54bb599ea7cc3ea9 559 Pfam PF00849 RNA pseudouridylate synthase 365 512 1.4E-27 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL543_02060 be268e24f94a12dd54bb599ea7cc3ea9 559 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 403 417 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL543_02060 be268e24f94a12dd54bb599ea7cc3ea9 559 Gene3D G3DSA:3.30.2350.10 347 558 1.3E-62 T 11-10-2018 AL543_02060 be268e24f94a12dd54bb599ea7cc3ea9 559 SUPERFAMILY SSF55120 351 555 1.46E-59 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL543_18265 8a559947bdeb22b63fc4c9c88303e5a7 388 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 253 278 - T 11-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL543_18265 8a559947bdeb22b63fc4c9c88303e5a7 388 Gene3D G3DSA:1.10.441.10 146 298 5.6E-129 T 11-10-2018 AL543_18265 8a559947bdeb22b63fc4c9c88303e5a7 388 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 2 379 7.2E-90 T 11-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL543_18265 8a559947bdeb22b63fc4c9c88303e5a7 388 SUPERFAMILY SSF51182 1 372 9.78E-100 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AL543_18265 8a559947bdeb22b63fc4c9c88303e5a7 388 PIRSF PIRSF001480 1 388 2.1E-102 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL543_18265 8a559947bdeb22b63fc4c9c88303e5a7 388 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 122 130 - T 11-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL543_18265 8a559947bdeb22b63fc4c9c88303e5a7 388 Gene3D G3DSA:2.60.120.10 3 273 5.6E-129 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL543_18265 8a559947bdeb22b63fc4c9c88303e5a7 388 PRINTS PR00714 Phosphomannose isomerase type I signature 122 145 2.1E-69 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL543_18265 8a559947bdeb22b63fc4c9c88303e5a7 388 PRINTS PR00714 Phosphomannose isomerase type I signature 77 98 2.1E-69 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL543_18265 8a559947bdeb22b63fc4c9c88303e5a7 388 PRINTS PR00714 Phosphomannose isomerase type I signature 253 272 2.1E-69 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL543_18265 8a559947bdeb22b63fc4c9c88303e5a7 388 PRINTS PR00714 Phosphomannose isomerase type I signature 218 233 2.1E-69 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL543_18265 8a559947bdeb22b63fc4c9c88303e5a7 388 PRINTS PR00714 Phosphomannose isomerase type I signature 1 15 2.1E-69 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL543_18265 8a559947bdeb22b63fc4c9c88303e5a7 388 PRINTS PR00714 Phosphomannose isomerase type I signature 29 44 2.1E-69 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL543_18265 8a559947bdeb22b63fc4c9c88303e5a7 388 PRINTS PR00714 Phosphomannose isomerase type I signature 272 291 2.1E-69 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL543_18265 8a559947bdeb22b63fc4c9c88303e5a7 388 PRINTS PR00714 Phosphomannose isomerase type I signature 234 253 2.1E-69 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL543_18265 8a559947bdeb22b63fc4c9c88303e5a7 388 Pfam PF01238 Phosphomannose isomerase type I 2 359 3.3E-87 T 11-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL543_18265 8a559947bdeb22b63fc4c9c88303e5a7 388 Gene3D G3DSA:2.60.120.10 299 380 5.6E-129 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL543_05965 cdfb18223c4eaba7477fc34d82aa0249 4269 Gene3D G3DSA:2.150.10.10 4107 4251 4.2E-16 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AL543_05965 cdfb18223c4eaba7477fc34d82aa0249 4269 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1848 1939 0.0023 T 11-10-2018 IPR010221 VCBS repeat AL543_05965 cdfb18223c4eaba7477fc34d82aa0249 4269 SUPERFAMILY SSF51120 4108 4236 7.85E-16 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AL543_05965 cdfb18223c4eaba7477fc34d82aa0249 4269 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 4132 4150 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site AL543_05965 cdfb18223c4eaba7477fc34d82aa0249 4269 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 4173 4266 1.3E-12 T 11-10-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass AL543_05965 cdfb18223c4eaba7477fc34d82aa0249 4269 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 4141 4159 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site AL543_05965 cdfb18223c4eaba7477fc34d82aa0249 4269 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 803 944 4.7E-52 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain AL543_05965 cdfb18223c4eaba7477fc34d82aa0249 4269 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 371 507 9.5E-48 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain AL543_05965 cdfb18223c4eaba7477fc34d82aa0249 4269 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 516 657 5.1E-54 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain AL543_05965 cdfb18223c4eaba7477fc34d82aa0249 4269 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1523 1665 8.9E-53 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain AL543_05965 cdfb18223c4eaba7477fc34d82aa0249 4269 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1955 2080 2.8E-44 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain AL543_05965 cdfb18223c4eaba7477fc34d82aa0249 4269 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1667 1809 2.0E-54 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain AL543_05965 cdfb18223c4eaba7477fc34d82aa0249 4269 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1091 1232 9.1E-52 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain AL543_05965 cdfb18223c4eaba7477fc34d82aa0249 4269 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1811 1952 5.5E-55 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain AL543_05965 cdfb18223c4eaba7477fc34d82aa0249 4269 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1379 1520 2.2E-51 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain AL543_05965 cdfb18223c4eaba7477fc34d82aa0249 4269 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1235 1376 3.1E-52 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain AL543_05965 cdfb18223c4eaba7477fc34d82aa0249 4269 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 659 800 2.6E-52 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain AL543_05965 cdfb18223c4eaba7477fc34d82aa0249 4269 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 947 1088 3.1E-52 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain AL543_15315 dae99348992d7133b997a60f2328a881 511 Gene3D G3DSA:1.10.275.10 2 197 1.2E-71 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal AL543_15315 dae99348992d7133b997a60f2328a881 511 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 5 494 5.4E-215 T 11-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL543_15315 dae99348992d7133b997a60f2328a881 511 SUPERFAMILY SSF48557 4 504 6.04E-196 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 AL543_15315 dae99348992d7133b997a60f2328a881 511 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 3 504 44.536 T 11-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL543_15315 dae99348992d7133b997a60f2328a881 511 Pfam PF00221 Aromatic amino acid lyase 11 471 4.3E-191 T 11-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 AL543_15315 dae99348992d7133b997a60f2328a881 511 Gene3D G3DSA:1.20.200.10 198 509 9.2E-126 T 11-10-2018 AL543_15315 dae99348992d7133b997a60f2328a881 511 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 11-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 AL543_00880 3d91180f0e0793a8e999ae2b35af100b 278 SUPERFAMILY SSF53850 15 265 2.57E-57 T 11-10-2018 AL543_00880 3d91180f0e0793a8e999ae2b35af100b 278 SMART SM00062 45 268 1.3E-44 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL543_00880 3d91180f0e0793a8e999ae2b35af100b 278 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 46 266 4.6E-49 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL543_00880 3d91180f0e0793a8e999ae2b35af100b 278 Gene3D G3DSA:3.40.190.10 131 222 9.6E-61 T 11-10-2018 AL543_00880 3d91180f0e0793a8e999ae2b35af100b 278 Gene3D G3DSA:3.40.190.10 37 255 9.6E-61 T 11-10-2018 AL543_00435 c074b60e637b9b8487f7296094b2e5a8 231 SUPERFAMILY SSF74653 150 227 4.58E-24 T 11-10-2018 AL543_00435 c074b60e637b9b8487f7296094b2e5a8 231 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 152 229 4.2E-24 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 AL543_00435 c074b60e637b9b8487f7296094b2e5a8 231 PRINTS PR01374 Gram-negative bacterial tonB protein signature 80 90 1.8E-5 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AL543_00435 c074b60e637b9b8487f7296094b2e5a8 231 PRINTS PR01374 Gram-negative bacterial tonB protein signature 147 168 1.8E-5 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AL543_00435 c074b60e637b9b8487f7296094b2e5a8 231 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 153 229 4.7E-23 T 11-10-2018 IPR006260 TonB/TolA, C-terminal AL543_00435 c074b60e637b9b8487f7296094b2e5a8 231 Gene3D G3DSA:3.30.1150.10 136 230 1.4E-22 T 11-10-2018 AL543_00410 a3752f6436e346eb4ea214382406b7a3 328 SUPERFAMILY SSF46626 173 324 1.86E-42 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL543_00410 a3752f6436e346eb4ea214382406b7a3 328 Pfam PF03150 Di-haem cytochrome c peroxidase 39 186 1.0E-48 T 11-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 AL543_00410 a3752f6436e346eb4ea214382406b7a3 328 SUPERFAMILY SSF46626 34 174 5.76E-48 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL543_00410 a3752f6436e346eb4ea214382406b7a3 328 Pfam PF00034 Cytochrome c 195 304 1.6E-11 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL543_00410 a3752f6436e346eb4ea214382406b7a3 328 Gene3D G3DSA:1.10.760.10 37 310 6.9E-113 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL543_00410 a3752f6436e346eb4ea214382406b7a3 328 PIRSF PIRSF000294 7 328 7.3E-124 T 11-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 AL543_00410 a3752f6436e346eb4ea214382406b7a3 328 Gene3D G3DSA:1.10.760.10 39 186 6.9E-113 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL543_11965 d787957b30e01585f033c925519fcfba 353 Gene3D G3DSA:2.30.42.10 256 352 2.9E-22 T 11-10-2018 AL543_11965 d787957b30e01585f033c925519fcfba 353 Pfam PF13180 PDZ domain 256 346 1.9E-14 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AL543_11965 d787957b30e01585f033c925519fcfba 353 PRINTS PR00834 HtrA/DegQ protease family signature 296 308 1.7E-45 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL543_11965 d787957b30e01585f033c925519fcfba 353 PRINTS PR00834 HtrA/DegQ protease family signature 90 102 1.7E-45 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL543_11965 d787957b30e01585f033c925519fcfba 353 PRINTS PR00834 HtrA/DegQ protease family signature 111 131 1.7E-45 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL543_11965 d787957b30e01585f033c925519fcfba 353 PRINTS PR00834 HtrA/DegQ protease family signature 186 203 1.7E-45 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL543_11965 d787957b30e01585f033c925519fcfba 353 PRINTS PR00834 HtrA/DegQ protease family signature 151 175 1.7E-45 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL543_11965 d787957b30e01585f033c925519fcfba 353 PRINTS PR00834 HtrA/DegQ protease family signature 208 225 1.7E-45 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL543_11965 d787957b30e01585f033c925519fcfba 353 Gene3D G3DSA:2.40.10.10 143 255 2.7E-36 T 11-10-2018 AL543_11965 d787957b30e01585f033c925519fcfba 353 SMART SM00228 256 338 5.5E-7 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AL543_11965 d787957b30e01585f033c925519fcfba 353 Gene3D G3DSA:2.40.10.10 32 141 2.8E-32 T 11-10-2018 AL543_11965 d787957b30e01585f033c925519fcfba 353 SUPERFAMILY SSF50156 239 346 6.49E-19 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AL543_11965 d787957b30e01585f033c925519fcfba 353 SUPERFAMILY SSF50494 44 253 6.59E-61 T 11-10-2018 IPR009003 Peptidase S1, PA clan AL543_11965 d787957b30e01585f033c925519fcfba 353 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 2 351 2.7E-180 T 11-10-2018 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 AL543_11965 d787957b30e01585f033c925519fcfba 353 Pfam PF13365 Trypsin-like peptidase domain 81 215 9.0E-33 T 11-10-2018 AL543_04070 f81f7bda4d2a680bca2898511b6264b1 136 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 131 2.7E-46 T 11-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L AL543_04070 f81f7bda4d2a680bca2898511b6264b1 136 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 133 3.7E-51 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 AL543_04070 f81f7bda4d2a680bca2898511b6264b1 136 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 132 24.207 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 AL543_04070 f81f7bda4d2a680bca2898511b6264b1 136 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 11-10-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site AL543_04070 f81f7bda4d2a680bca2898511b6264b1 136 SUPERFAMILY SSF81330 13 127 4.18E-36 T 11-10-2018 IPR036019 Gated mechanosensitive channel AL543_04070 f81f7bda4d2a680bca2898511b6264b1 136 Gene3D G3DSA:1.10.1200.120 3 134 1.1E-43 T 11-10-2018 IPR036019 Gated mechanosensitive channel AL543_04070 f81f7bda4d2a680bca2898511b6264b1 136 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 92 8.6E-12 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 AL543_04070 f81f7bda4d2a680bca2898511b6264b1 136 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 93 102 8.6E-12 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 AL543_04070 f81f7bda4d2a680bca2898511b6264b1 136 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 8.6E-12 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 AL543_20445 21bb9be0a4ac2e966506650b86a61f91 332 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 102 116 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AL543_20445 21bb9be0a4ac2e966506650b86a61f91 332 Gene3D G3DSA:3.30.70.1560 132 205 1.1E-53 T 11-10-2018 AL543_20445 21bb9be0a4ac2e966506650b86a61f91 332 Pfam PF00849 RNA pseudouridylate synthase 67 193 1.2E-13 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL543_20445 21bb9be0a4ac2e966506650b86a61f91 332 SUPERFAMILY SSF55174 3 98 9.42E-14 T 11-10-2018 AL543_20445 21bb9be0a4ac2e966506650b86a61f91 332 Gene3D G3DSA:3.10.290.10 6 61 1.9E-20 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AL543_20445 21bb9be0a4ac2e966506650b86a61f91 332 Gene3D G3DSA:3.30.70.580 68 227 1.1E-53 T 11-10-2018 AL543_20445 21bb9be0a4ac2e966506650b86a61f91 332 Pfam PF01479 S4 domain 8 52 5.3E-10 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_20445 21bb9be0a4ac2e966506650b86a61f91 332 SUPERFAMILY SSF55120 66 227 2.76E-38 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL543_20445 21bb9be0a4ac2e966506650b86a61f91 332 SMART SM00363 7 64 3.1E-8 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_20445 21bb9be0a4ac2e966506650b86a61f91 332 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 71 223 2.3E-47 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AL543_10095 dcdedc53a2f10d677f34fa0fb190dfc9 699 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 61 698 2.6E-105 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AL543_10095 dcdedc53a2f10d677f34fa0fb190dfc9 699 Gene3D G3DSA:2.40.170.20 170 699 9.5E-130 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AL543_10095 dcdedc53a2f10d677f34fa0fb190dfc9 699 Gene3D G3DSA:2.170.130.10 35 169 6.7E-34 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AL543_10095 dcdedc53a2f10d677f34fa0fb190dfc9 699 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 51 - T 11-10-2018 IPR010916 TonB box, conserved site AL543_10095 dcdedc53a2f10d677f34fa0fb190dfc9 699 Pfam PF00593 TonB dependent receptor 260 698 1.9E-60 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AL543_10095 dcdedc53a2f10d677f34fa0fb190dfc9 699 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 159 2.3E-17 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AL543_10095 dcdedc53a2f10d677f34fa0fb190dfc9 699 SUPERFAMILY SSF56935 36 699 1.72E-128 T 11-10-2018 AL543_13260 426b434e9e7ee8a87c5724ebc9a158ee 356 Pfam PF08218 Citrate lyase ligase C-terminal domain 152 338 8.2E-85 T 11-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 AL543_13260 426b434e9e7ee8a87c5724ebc9a158ee 356 PIRSF PIRSF005751 6 355 2.9E-144 T 11-10-2018 IPR005216 Citrate lyase ligase GO:0008771 AL543_13260 426b434e9e7ee8a87c5724ebc9a158ee 356 Pfam PF13673 Acetyltransferase (GNAT) domain 28 120 2.2E-6 T 11-10-2018 IPR000182 GNAT domain AL543_13260 426b434e9e7ee8a87c5724ebc9a158ee 356 SMART SM00764 152 338 6.0E-133 T 11-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 AL543_13260 426b434e9e7ee8a87c5724ebc9a158ee 356 TIGRFAM TIGR00124 cit_ly_ligase: [citrate (pro-3S)-lyase] ligase 12 342 1.0E-137 T 11-10-2018 IPR005216 Citrate lyase ligase GO:0008771 AL543_13260 426b434e9e7ee8a87c5724ebc9a158ee 356 Gene3D G3DSA:3.40.630.30 3 134 2.4E-10 T 11-10-2018 AL543_13260 426b434e9e7ee8a87c5724ebc9a158ee 356 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 127 342 2.0E-119 T 11-10-2018 AL543_13260 426b434e9e7ee8a87c5724ebc9a158ee 356 SUPERFAMILY SSF52374 151 341 4.44E-25 T 11-10-2018 AL543_13260 426b434e9e7ee8a87c5724ebc9a158ee 356 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 152 208 3.4E-12 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AL543_13260 426b434e9e7ee8a87c5724ebc9a158ee 356 SUPERFAMILY SSF55729 35 122 3.01E-12 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL543_13260 426b434e9e7ee8a87c5724ebc9a158ee 356 Gene3D G3DSA:3.40.50.620 149 330 3.9E-20 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL543_12605 b709f9cab8b509d3ca6ee7bbdfd5531c 375 SMART SM00830 9 89 4.9E-28 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL543_12605 b709f9cab8b509d3ca6ee7bbdfd5531c 375 Gene3D G3DSA:1.20.59.10 1 80 2.2E-16 T 11-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL543_12605 b709f9cab8b509d3ca6ee7bbdfd5531c 375 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 3.7E-40 T 11-10-2018 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 AL543_12605 b709f9cab8b509d3ca6ee7bbdfd5531c 375 Pfam PF01817 Chorismate mutase type II 9 87 7.0E-20 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL543_12605 b709f9cab8b509d3ca6ee7bbdfd5531c 375 Pfam PF02153 Prephenate dehydrogenase 132 343 8.7E-33 T 11-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 AL543_12605 b709f9cab8b509d3ca6ee7bbdfd5531c 375 PIRSF PIRSF001499 1 374 2.2E-175 T 11-10-2018 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 AL543_12605 b709f9cab8b509d3ca6ee7bbdfd5531c 375 SUPERFAMILY SSF48179 241 366 1.59E-41 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AL543_12605 b709f9cab8b509d3ca6ee7bbdfd5531c 375 SUPERFAMILY SSF51735 91 237 3.94E-37 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_12605 b709f9cab8b509d3ca6ee7bbdfd5531c 375 Gene3D G3DSA:1.10.3660.10 248 373 4.5E-48 T 11-10-2018 AL543_12605 b709f9cab8b509d3ca6ee7bbdfd5531c 375 Gene3D G3DSA:3.40.50.720 81 246 1.7E-43 T 11-10-2018 AL543_12605 b709f9cab8b509d3ca6ee7bbdfd5531c 375 SUPERFAMILY SSF48600 4 88 5.49E-23 T 11-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL543_19740 4f4d353d5fb64139177570d76fc25898 404 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 404 2.7E-184 T 11-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 AL543_19740 4f4d353d5fb64139177570d76fc25898 404 SUPERFAMILY SSF47005 107 149 1.7E-11 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AL543_19740 4f4d353d5fb64139177570d76fc25898 404 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 174 402 1.9E-81 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 AL543_19740 4f4d353d5fb64139177570d76fc25898 404 Gene3D G3DSA:3.30.559.10 172 404 6.9E-98 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AL543_19740 4f4d353d5fb64139177570d76fc25898 404 SUPERFAMILY SSF52777 175 403 1.16E-89 T 11-10-2018 AL543_19740 4f4d353d5fb64139177570d76fc25898 404 Pfam PF02817 e3 binding domain 113 146 2.9E-12 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 AL543_19740 4f4d353d5fb64139177570d76fc25898 404 Pfam PF00364 Biotin-requiring enzyme 4 76 4.2E-19 T 11-10-2018 IPR000089 Biotin/lipoyl attachment AL543_19740 4f4d353d5fb64139177570d76fc25898 404 Gene3D G3DSA:4.10.320.10 102 151 4.4E-22 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AL543_19740 4f4d353d5fb64139177570d76fc25898 404 Gene3D G3DSA:2.40.50.100 1 79 2.4E-23 T 11-10-2018 AL543_19740 4f4d353d5fb64139177570d76fc25898 404 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AL543_19740 4f4d353d5fb64139177570d76fc25898 404 SUPERFAMILY SSF51230 1 94 2.36E-25 T 11-10-2018 IPR011053 Single hybrid motif AL543_06240 f49d415d37a3cf02a4e4e9451a375677 301 Gene3D G3DSA:3.30.1490.20 115 181 4.4E-26 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AL543_06240 f49d415d37a3cf02a4e4e9451a375677 301 Gene3D G3DSA:3.40.50.20 1 114 6.4E-40 T 11-10-2018 AL543_06240 f49d415d37a3cf02a4e4e9451a375677 301 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 53.935 T 11-10-2018 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK AL543_06240 f49d415d37a3cf02a4e4e9451a375677 301 SUPERFAMILY SSF56059 98 288 1.12E-49 T 11-10-2018 AL543_06240 f49d415d37a3cf02a4e4e9451a375677 301 Gene3D G3DSA:3.30.470.80 182 299 7.8E-43 T 11-10-2018 AL543_06240 f49d415d37a3cf02a4e4e9451a375677 301 Pfam PF08443 RimK-like ATP-grasp domain 98 286 3.5E-68 T 11-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 AL543_06240 f49d415d37a3cf02a4e4e9451a375677 301 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 286 2.9E-87 T 11-10-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 AL543_03720 f4be9d08a492586ccbd97a37736a6efa 352 Gene3D G3DSA:2.40.50.140 283 323 2.5E-8 T 11-10-2018 AL543_03720 f4be9d08a492586ccbd97a37736a6efa 352 SUPERFAMILY SSF52540 7 245 1.19E-85 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_03720 f4be9d08a492586ccbd97a37736a6efa 352 SMART SM00382 31 214 9.9E-19 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_03720 f4be9d08a492586ccbd97a37736a6efa 352 Gene3D G3DSA:2.40.50.940 225 282 2.5E-8 T 11-10-2018 AL543_03720 f4be9d08a492586ccbd97a37736a6efa 352 Pfam PF00005 ABC transporter 24 164 6.8E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_03720 f4be9d08a492586ccbd97a37736a6efa 352 SUPERFAMILY SSF50331 239 347 2.19E-12 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AL543_03720 f4be9d08a492586ccbd97a37736a6efa 352 Pfam PF08402 TOBE domain 276 347 6.3E-6 T 11-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 AL543_03720 f4be9d08a492586ccbd97a37736a6efa 352 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_03720 f4be9d08a492586ccbd97a37736a6efa 352 Gene3D G3DSA:3.40.50.300 7 224 5.6E-69 T 11-10-2018 AL543_03490 1e40e698a0873c195bab7071d260f2b2 347 Pfam PF13592 Winged helix-turn helix 98 155 1.7E-17 T 11-10-2018 IPR025959 Winged helix-turn helix domain AL543_03490 1e40e698a0873c195bab7071d260f2b2 347 SUPERFAMILY SSF53098 221 316 2.58E-7 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_03490 1e40e698a0873c195bab7071d260f2b2 347 SUPERFAMILY SSF46689 16 131 3.76E-23 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_03490 1e40e698a0873c195bab7071d260f2b2 347 Pfam PF13384 Homeodomain-like domain 28 67 4.3E-7 T 11-10-2018 AL543_03490 1e40e698a0873c195bab7071d260f2b2 347 Pfam PF13358 DDE superfamily endonuclease 169 312 1.9E-34 T 11-10-2018 IPR038717 Tc1-like transposase, DDE domain AL543_03490 1e40e698a0873c195bab7071d260f2b2 347 Gene3D G3DSA:3.30.420.470 137 344 4.3E-12 T 11-10-2018 AL543_01810 821865094adcae142ebfa868ca774afd 263 SUPERFAMILY SSF48008 100 237 1.8E-27 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL543_01810 821865094adcae142ebfa868ca774afd 263 SMART SM00345 21 80 4.5E-21 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL543_01810 821865094adcae142ebfa868ca774afd 263 Gene3D G3DSA:1.20.120.530 90 243 2.6E-23 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL543_01810 821865094adcae142ebfa868ca774afd 263 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 80 2.4E-20 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL543_01810 821865094adcae142ebfa868ca774afd 263 Gene3D G3DSA:1.10.10.10 12 83 7.3E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_01810 821865094adcae142ebfa868ca774afd 263 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 54 5.9E-8 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL543_01810 821865094adcae142ebfa868ca774afd 263 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 54 70 5.9E-8 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL543_01810 821865094adcae142ebfa868ca774afd 263 Pfam PF07729 FCD domain 102 228 6.4E-21 T 11-10-2018 IPR011711 GntR, C-terminal AL543_01810 821865094adcae142ebfa868ca774afd 263 SUPERFAMILY SSF46785 14 107 2.4E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_01810 821865094adcae142ebfa868ca774afd 263 SMART SM00895 102 229 3.6E-20 T 11-10-2018 IPR011711 GntR, C-terminal AL543_18955 8d51fe53f87ba37b388f5bc7324f57c2 310 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 266 292 - T 11-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 AL543_18955 8d51fe53f87ba37b388f5bc7324f57c2 310 Pfam PF01148 Cytidylyltransferase family 42 307 1.3E-68 T 11-10-2018 AL543_04530 8ce30d716aebaedea83b14bb0687763c 483 Pfam PF00571 CBS domain 313 364 1.3E-9 T 11-10-2018 IPR000644 CBS domain AL543_04530 8ce30d716aebaedea83b14bb0687763c 483 Pfam PF00571 CBS domain 382 464 0.0032 T 11-10-2018 IPR000644 CBS domain AL543_04530 8ce30d716aebaedea83b14bb0687763c 483 SUPERFAMILY SSF54631 310 464 5.51E-23 T 11-10-2018 AL543_04530 8ce30d716aebaedea83b14bb0687763c 483 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 16 281 2.1E-111 T 11-10-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 AL543_04530 8ce30d716aebaedea83b14bb0687763c 483 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 170 180 - T 11-10-2018 IPR024002 Formate/nitrite transporter, conserved site AL543_04530 8ce30d716aebaedea83b14bb0687763c 483 Gene3D G3DSA:1.20.1080.10 4 270 9.2E-88 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AL543_04530 8ce30d716aebaedea83b14bb0687763c 483 Pfam PF01226 Formate/nitrite transporter 17 277 1.8E-70 T 11-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 AL543_04530 8ce30d716aebaedea83b14bb0687763c 483 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 85 94 - T 11-10-2018 IPR024002 Formate/nitrite transporter, conserved site AL543_04530 8ce30d716aebaedea83b14bb0687763c 483 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 29 281 3.2E-76 T 11-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 AL543_04530 8ce30d716aebaedea83b14bb0687763c 483 Gene3D G3DSA:3.10.580.10 306 467 2.4E-25 T 11-10-2018 AL543_04530 8ce30d716aebaedea83b14bb0687763c 483 SMART SM00116 418 465 9.9 T 11-10-2018 IPR000644 CBS domain AL543_04530 8ce30d716aebaedea83b14bb0687763c 483 SMART SM00116 320 368 7.8E-5 T 11-10-2018 IPR000644 CBS domain AL543_07980 927d45d261f248feb381ded52f822e37 226 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 7 220 2.9E-61 T 11-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 AL543_07980 927d45d261f248feb381ded52f822e37 226 SUPERFAMILY SSF56784 3 222 1.84E-60 T 11-10-2018 IPR036412 HAD-like superfamily AL543_07980 927d45d261f248feb381ded52f822e37 226 Gene3D G3DSA:1.10.150.240 19 92 9.6E-65 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AL543_07980 927d45d261f248feb381ded52f822e37 226 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 108 187 1.4E-9 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL543_07980 927d45d261f248feb381ded52f822e37 226 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 191 1.8E-38 T 11-10-2018 AL543_07980 927d45d261f248feb381ded52f822e37 226 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 70 192 3.4E-11 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL543_07980 927d45d261f248feb381ded52f822e37 226 Gene3D G3DSA:3.40.50.1000 7 214 9.6E-65 T 11-10-2018 IPR023214 HAD superfamily AL543_07980 927d45d261f248feb381ded52f822e37 226 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 86 190 4.1E-14 T 11-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 AL543_07980 927d45d261f248feb381ded52f822e37 226 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 4 223 35.875 T 11-10-2018 IPR037512 Phosphoglycolate phosphatase, prokaryotic GO:0005975|GO:0008967 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 AL543_07980 927d45d261f248feb381ded52f822e37 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 5.3E-9 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL543_07980 927d45d261f248feb381ded52f822e37 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 5.3E-9 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL543_07980 927d45d261f248feb381ded52f822e37 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 5.3E-9 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL543_11020 cff6dbabcf613bf9fa8a9327b70ee903 253 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 12 246 39.618 T 11-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 AL543_11020 cff6dbabcf613bf9fa8a9327b70ee903 253 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 24 245 6.2E-91 T 11-10-2018 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 AL543_11020 cff6dbabcf613bf9fa8a9327b70ee903 253 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 51 222 1.6E-49 T 11-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 AL543_11020 cff6dbabcf613bf9fa8a9327b70ee903 253 Gene3D G3DSA:3.40.50.620 7 219 3.4E-63 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL543_11020 cff6dbabcf613bf9fa8a9327b70ee903 253 SUPERFAMILY SSF52402 24 211 2.09E-55 T 11-10-2018 AL543_11020 cff6dbabcf613bf9fa8a9327b70ee903 253 PIRSF PIRSF000857 5 251 3.4E-56 T 11-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 AL543_11020 cff6dbabcf613bf9fa8a9327b70ee903 253 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 36 246 1.6E-85 T 11-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 AL543_08390 e1d9da715c0d411f12077225932437c0 240 SUPERFAMILY SSF52172 3 127 2.28E-42 T 11-10-2018 IPR011006 CheY-like superfamily AL543_08390 e1d9da715c0d411f12077225932437c0 240 SMART SM00862 156 232 2.3E-21 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL543_08390 e1d9da715c0d411f12077225932437c0 240 SUPERFAMILY SSF46894 132 234 2.35E-27 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL543_08390 e1d9da715c0d411f12077225932437c0 240 Gene3D G3DSA:1.10.10.10 130 239 4.3E-38 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_08390 e1d9da715c0d411f12077225932437c0 240 Gene3D G3DSA:3.40.50.2300 1 125 3.2E-40 T 11-10-2018 AL543_08390 e1d9da715c0d411f12077225932437c0 240 SMART SM00448 5 116 3.6E-45 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_08390 e1d9da715c0d411f12077225932437c0 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 4.6E-22 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL543_08390 e1d9da715c0d411f12077225932437c0 240 Pfam PF00072 Response regulator receiver domain 7 117 1.4E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_13615 7bc00eff463dbb2daaa077e1f86c9ddc 457 Pfam PF11892 Domain of unknown function (DUF3412) 335 456 2.1E-57 T 11-10-2018 IPR021826 Domain of unknown function DUF3412 KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 AL543_13615 7bc00eff463dbb2daaa077e1f86c9ddc 457 SUPERFAMILY SSF102405 124 331 1.53E-41 T 11-10-2018 AL543_13615 7bc00eff463dbb2daaa077e1f86c9ddc 457 Pfam PF03641 Possible lysine decarboxylase 192 331 1.7E-37 T 11-10-2018 IPR031100 LOG family AL543_13615 7bc00eff463dbb2daaa077e1f86c9ddc 457 Gene3D G3DSA:3.40.50.450 126 455 5.4E-129 T 11-10-2018 AL543_13615 7bc00eff463dbb2daaa077e1f86c9ddc 457 Gene3D G3DSA:3.30.1850.10 4 125 6.8E-59 T 11-10-2018 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 AL543_13615 7bc00eff463dbb2daaa077e1f86c9ddc 457 Pfam PF14793 Domain of unknown function (DUF4478) 9 114 2.3E-51 T 11-10-2018 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 AL543_13375 d890ec0ab0ff8d9a910e838727acb00f 413 Gene3D G3DSA:1.10.150.130 102 215 5.3E-31 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AL543_13375 d890ec0ab0ff8d9a910e838727acb00f 413 SUPERFAMILY SSF56349 106 386 3.53E-61 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL543_13375 d890ec0ab0ff8d9a910e838727acb00f 413 Pfam PF13356 Arm DNA-binding domain 8 95 1.9E-17 T 11-10-2018 IPR025166 Integrase, DNA-binding domain AL543_13375 d890ec0ab0ff8d9a910e838727acb00f 413 Gene3D G3DSA:1.10.443.10 216 387 1.0E-17 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AL543_13375 d890ec0ab0ff8d9a910e838727acb00f 413 Pfam PF00589 Phage integrase family 214 376 5.2E-27 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL543_13375 d890ec0ab0ff8d9a910e838727acb00f 413 Gene3D G3DSA:3.30.160.390 7 95 1.7E-25 T 11-10-2018 IPR038488 Integrase, DNA-binding domain superfamily AL543_01815 eb3091b343daefd00b387e61ae657fb6 396 Gene3D G3DSA:3.20.20.150 174 395 1.4E-78 T 11-10-2018 AL543_01815 eb3091b343daefd00b387e61ae657fb6 396 Gene3D G3DSA:3.20.20.150 1 173 8.5E-71 T 11-10-2018 AL543_01815 eb3091b343daefd00b387e61ae657fb6 396 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 396 222.9 T 11-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 AL543_01815 eb3091b343daefd00b387e61ae657fb6 396 SUPERFAMILY SSF51658 1 384 4.11E-79 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily AL543_01815 eb3091b343daefd00b387e61ae657fb6 396 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 389 1.3E-156 T 11-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 AL543_01815 eb3091b343daefd00b387e61ae657fb6 396 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 1 395 1.2E-213 T 11-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 AL543_01815 eb3091b343daefd00b387e61ae657fb6 396 PIRSF PIRSF016049 1 394 1.2E-176 T 11-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 AL543_03055 fe8d89238d2c8cd8f13587182c11dea7 663 SMART SM00487 45 243 1.7E-60 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL543_03055 fe8d89238d2c8cd8f13587182c11dea7 663 Gene3D G3DSA:3.40.50.300 235 453 6.4E-52 T 11-10-2018 AL543_03055 fe8d89238d2c8cd8f13587182c11dea7 663 Pfam PF03880 DbpA RNA binding domain 504 571 4.3E-17 T 11-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain AL543_03055 fe8d89238d2c8cd8f13587182c11dea7 663 SUPERFAMILY SSF52540 94 381 1.25E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_03055 fe8d89238d2c8cd8f13587182c11dea7 663 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 174 182 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AL543_03055 fe8d89238d2c8cd8f13587182c11dea7 663 Gene3D G3DSA:3.30.70.330 505 574 8.8E-11 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily AL543_03055 fe8d89238d2c8cd8f13587182c11dea7 663 Pfam PF00270 DEAD/DEAH box helicase 50 216 1.6E-49 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL543_03055 fe8d89238d2c8cd8f13587182c11dea7 663 Gene3D G3DSA:3.40.50.300 13 231 8.8E-74 T 11-10-2018 AL543_03055 fe8d89238d2c8cd8f13587182c11dea7 663 SMART SM00490 279 360 2.2E-34 T 11-10-2018 IPR001650 Helicase, C-terminal AL543_03055 fe8d89238d2c8cd8f13587182c11dea7 663 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 21 576 41.871 T 11-10-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 AL543_03055 fe8d89238d2c8cd8f13587182c11dea7 663 Pfam PF00271 Helicase conserved C-terminal domain 252 360 1.4E-29 T 11-10-2018 IPR001650 Helicase, C-terminal AL543_08585 31ed88e271affb7c7cab4bb916e79fa9 466 SUPERFAMILY SSF52172 2 186 8.97E-43 T 11-10-2018 IPR011006 CheY-like superfamily AL543_08585 31ed88e271affb7c7cab4bb916e79fa9 466 SMART SM00448 4 115 4.0E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_08585 31ed88e271affb7c7cab4bb916e79fa9 466 Pfam PF00158 Sigma-54 interaction domain 141 308 5.9E-71 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL543_08585 31ed88e271affb7c7cab4bb916e79fa9 466 Pfam PF02954 Bacterial regulatory protein, Fis family 425 465 7.5E-16 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL543_08585 31ed88e271affb7c7cab4bb916e79fa9 466 Gene3D G3DSA:1.10.8.60 312 379 6.2E-18 T 11-10-2018 AL543_08585 31ed88e271affb7c7cab4bb916e79fa9 466 Gene3D G3DSA:1.10.10.60 380 466 4.4E-26 T 11-10-2018 AL543_08585 31ed88e271affb7c7cab4bb916e79fa9 466 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 431 448 3.1E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL543_08585 31ed88e271affb7c7cab4bb916e79fa9 466 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 448 466 3.1E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL543_08585 31ed88e271affb7c7cab4bb916e79fa9 466 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL543_08585 31ed88e271affb7c7cab4bb916e79fa9 466 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AL543_08585 31ed88e271affb7c7cab4bb916e79fa9 466 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 465 5.0E-247 T 11-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 AL543_08585 31ed88e271affb7c7cab4bb916e79fa9 466 Gene3D G3DSA:3.40.50.2300 1 124 2.1E-39 T 11-10-2018 AL543_08585 31ed88e271affb7c7cab4bb916e79fa9 466 SMART SM00382 161 312 1.5E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_08585 31ed88e271affb7c7cab4bb916e79fa9 466 SUPERFAMILY SSF52540 140 384 9.69E-75 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_08585 31ed88e271affb7c7cab4bb916e79fa9 466 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 165 178 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL543_08585 31ed88e271affb7c7cab4bb916e79fa9 466 SUPERFAMILY SSF46689 381 465 6.81E-19 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_08585 31ed88e271affb7c7cab4bb916e79fa9 466 Gene3D G3DSA:3.40.50.300 127 311 7.6E-68 T 11-10-2018 AL543_08585 31ed88e271affb7c7cab4bb916e79fa9 466 Pfam PF00072 Response regulator receiver domain 6 115 4.2E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_06290 612151345acc50300895c9ab587d7999 198 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 198 29.969 T 11-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 AL543_06290 612151345acc50300895c9ab587d7999 198 PIRSF PIRSF006102 1 198 4.0E-67 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 AL543_06290 612151345acc50300895c9ab587d7999 198 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 196 1.2E-60 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 AL543_06290 612151345acc50300895c9ab587d7999 198 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 197 1.8E-107 T 11-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 AL543_05505 8f3073b658b62140dc4bc550f49e4b36 85 Gene3D G3DSA:3.40.1620.10 1 40 1.1E-5 T 11-10-2018 AL543_05505 8f3073b658b62140dc4bc550f49e4b36 85 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 67 8.0E-15 T 11-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AL543_05505 8f3073b658b62140dc4bc550f49e4b36 85 SUPERFAMILY SSF143120 1 75 2.7E-16 T 11-10-2018 IPR036165 YefM-like superfamily AL543_05505 8f3073b658b62140dc4bc550f49e4b36 85 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 5 56 4.5E-11 T 11-10-2018 AL543_04240 d03559ed7820a8a022297bf3e864e8a5 565 Gene3D G3DSA:3.40.190.10 122 312 1.0E-36 T 11-10-2018 AL543_04240 d03559ed7820a8a022297bf3e864e8a5 565 SUPERFAMILY SSF53850 121 558 7.6E-62 T 11-10-2018 AL543_04240 d03559ed7820a8a022297bf3e864e8a5 565 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 164 306 9.4E-21 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain AL543_04240 d03559ed7820a8a022297bf3e864e8a5 565 Pfam PF12793 Sugar transport-related sRNA regulator N-term 5 119 3.0E-41 T 11-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain AL543_16040 c7d8dea5870c0008d5f153278f30b1a4 377 Pfam PF00285 Citrate synthase, C-terminal domain 11 358 6.2E-113 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AL543_16040 c7d8dea5870c0008d5f153278f30b1a4 377 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 11 376 1.9E-163 T 11-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 AL543_16040 c7d8dea5870c0008d5f153278f30b1a4 377 PIRSF PIRSF001369 4 377 1.0E-112 T 11-10-2018 IPR024176 Citrate synthase, bacterial-type AL543_16040 c7d8dea5870c0008d5f153278f30b1a4 377 PRINTS PR00143 Citrate synthase signature 329 343 1.3E-36 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AL543_16040 c7d8dea5870c0008d5f153278f30b1a4 377 PRINTS PR00143 Citrate synthase signature 252 272 1.3E-36 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AL543_16040 c7d8dea5870c0008d5f153278f30b1a4 377 PRINTS PR00143 Citrate synthase signature 199 227 1.3E-36 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AL543_16040 c7d8dea5870c0008d5f153278f30b1a4 377 PRINTS PR00143 Citrate synthase signature 177 192 1.3E-36 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AL543_16040 c7d8dea5870c0008d5f153278f30b1a4 377 PRINTS PR00143 Citrate synthase signature 126 139 1.3E-36 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AL543_16040 c7d8dea5870c0008d5f153278f30b1a4 377 PRINTS PR00143 Citrate synthase signature 309 325 1.3E-36 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AL543_16040 c7d8dea5870c0008d5f153278f30b1a4 377 ProSitePatterns PS00480 Citrate synthase signature. 259 271 - T 11-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AL543_16040 c7d8dea5870c0008d5f153278f30b1a4 377 Gene3D G3DSA:1.10.230.10 225 323 1.1E-115 T 11-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain AL543_16040 c7d8dea5870c0008d5f153278f30b1a4 377 SUPERFAMILY SSF48256 10 376 7.07E-122 T 11-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 AL543_16040 c7d8dea5870c0008d5f153278f30b1a4 377 Gene3D G3DSA:1.10.580.10 32 356 1.1E-115 T 11-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AL543_10760 a8fa7246021fab14b45d6a2e38f2f8fe 285 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 9 285 49.346 T 11-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 AL543_10760 a8fa7246021fab14b45d6a2e38f2f8fe 285 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 48 283 1.6E-87 T 11-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 AL543_10760 a8fa7246021fab14b45d6a2e38f2f8fe 285 Pfam PF02666 Phosphatidylserine decarboxylase 62 279 1.6E-60 T 11-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 AL543_11375 3a4bad0c85b70d6b812586627e832f01 86 SUPERFAMILY SSF110324 2 80 9.42E-35 T 11-10-2018 AL543_11375 3a4bad0c85b70d6b812586627e832f01 86 Pfam PF01016 Ribosomal L27 protein 2 82 7.9E-40 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_11375 3a4bad0c85b70d6b812586627e832f01 86 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.624 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_11375 3a4bad0c85b70d6b812586627e832f01 86 Gene3D G3DSA:2.40.50.100 21 86 3.4E-32 T 11-10-2018 AL543_11375 3a4bad0c85b70d6b812586627e832f01 86 PRINTS PR00063 Ribosomal protein L27 signature 54 78 7.2E-40 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_11375 3a4bad0c85b70d6b812586627e832f01 86 PRINTS PR00063 Ribosomal protein L27 signature 4 28 7.2E-40 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_11375 3a4bad0c85b70d6b812586627e832f01 86 PRINTS PR00063 Ribosomal protein L27 signature 29 53 7.2E-40 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_11375 3a4bad0c85b70d6b812586627e832f01 86 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 5.0E-18 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_11375 3a4bad0c85b70d6b812586627e832f01 86 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 11-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_11375 3a4bad0c85b70d6b812586627e832f01 86 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 6.1E-44 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_01120 a27552603b2eecb91b0730f2fe6be624 605 Pfam PF03781 Sulfatase-modifying factor enzyme 1 383 603 1.4E-52 T 11-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 AL543_01120 a27552603b2eecb91b0730f2fe6be624 605 Pfam PF08308 PEGA domain 296 363 1.2E-22 T 11-10-2018 IPR013229 PEGA AL543_01120 a27552603b2eecb91b0730f2fe6be624 605 Gene3D G3DSA:3.90.1580.10 383 604 1.3E-53 T 11-10-2018 AL543_01120 a27552603b2eecb91b0730f2fe6be624 605 SUPERFAMILY SSF56436 381 604 2.59E-54 T 11-10-2018 IPR016187 C-type lectin fold AL543_20560 11e7754c1afd8d898493af8ab87e3d41 440 SUPERFAMILY SSF52402 15 231 2.43E-61 T 11-10-2018 AL543_20560 11e7754c1afd8d898493af8ab87e3d41 440 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 19 201 1.6E-53 T 11-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AL543_20560 11e7754c1afd8d898493af8ab87e3d41 440 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 362 408 3.2E-15 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AL543_20560 11e7754c1afd8d898493af8ab87e3d41 440 Gene3D G3DSA:3.40.50.620 14 231 6.1E-69 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL543_20560 11e7754c1afd8d898493af8ab87e3d41 440 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 9 308 22.845 T 11-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AL543_20560 11e7754c1afd8d898493af8ab87e3d41 440 SMART SM00977 362 431 1.8E-23 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AL543_20560 11e7754c1afd8d898493af8ab87e3d41 440 SUPERFAMILY SSF56037 320 433 3.92E-27 T 11-10-2018 AL543_20560 11e7754c1afd8d898493af8ab87e3d41 440 Pfam PF09179 TilS substrate binding domain 246 313 3.3E-18 T 11-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AL543_20560 11e7754c1afd8d898493af8ab87e3d41 440 Gene3D G3DSA:1.20.59.20 232 317 4.2E-27 T 11-10-2018 AL543_20560 11e7754c1afd8d898493af8ab87e3d41 440 SUPERFAMILY SSF82829 232 316 1.83E-22 T 11-10-2018 AL543_20560 11e7754c1afd8d898493af8ab87e3d41 440 Pfam PF11734 TilS substrate C-terminal domain 364 430 1.2E-22 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AL543_20560 11e7754c1afd8d898493af8ab87e3d41 440 Pfam PF01171 PP-loop family 20 197 4.2E-59 T 11-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 AL543_04750 85320f2f9d35dbbf99aa664d1fe60b85 969 SUPERFAMILY SSF53649 392 663 3.17E-8 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AL543_04750 85320f2f9d35dbbf99aa664d1fe60b85 969 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 397 657 1.5E-10 T 11-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 AL543_14955 86ec3d67d0836cf71e2ba067ae7afbb2 135 Gene3D G3DSA:1.10.287.1050 1 85 4.3E-29 T 11-10-2018 IPR027454 Histone-like protein H-NS, N-terminal GO:0046983 AL543_14955 86ec3d67d0836cf71e2ba067ae7afbb2 135 Gene3D G3DSA:4.10.430.10 92 135 2.7E-24 T 11-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 AL543_14955 86ec3d67d0836cf71e2ba067ae7afbb2 135 SUPERFAMILY SSF81273 4 60 9.22E-17 T 11-10-2018 AL543_14955 86ec3d67d0836cf71e2ba067ae7afbb2 135 Pfam PF00816 H-NS histone family 38 129 4.0E-20 T 11-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 AL543_14955 86ec3d67d0836cf71e2ba067ae7afbb2 135 SMART SM00528 88 135 6.9E-25 T 11-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 AL543_14955 86ec3d67d0836cf71e2ba067ae7afbb2 135 SUPERFAMILY SSF81273 93 134 6.67E-12 T 11-10-2018 AL543_14955 86ec3d67d0836cf71e2ba067ae7afbb2 135 PIRSF PIRSF002096 3 135 1.4E-55 T 11-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 AL543_07950 235a33f0ddc52f4f657680c6fa12d0b0 403 Gene3D G3DSA:3.90.1150.10 29 392 2.4E-148 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL543_07950 235a33f0ddc52f4f657680c6fa12d0b0 403 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 222 259 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL543_07950 235a33f0ddc52f4f657680c6fa12d0b0 403 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 15 402 68.302 T 11-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AL543_07950 235a33f0ddc52f4f657680c6fa12d0b0 403 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 7 402 2.1E-208 T 11-10-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 AL543_07950 235a33f0ddc52f4f657680c6fa12d0b0 403 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 16 399 4.9E-148 T 11-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AL543_07950 235a33f0ddc52f4f657680c6fa12d0b0 403 Pfam PF00202 Aminotransferase class-III 22 399 7.3E-127 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL543_07950 235a33f0ddc52f4f657680c6fa12d0b0 403 PIRSF PIRSF000521 28 157 7.0E-7 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL543_07950 235a33f0ddc52f4f657680c6fa12d0b0 403 PIRSF PIRSF000521 173 402 4.3E-37 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL543_07950 235a33f0ddc52f4f657680c6fa12d0b0 403 SUPERFAMILY SSF53383 16 399 3.4E-127 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL543_07950 235a33f0ddc52f4f657680c6fa12d0b0 403 Gene3D G3DSA:3.40.640.10 59 304 2.4E-148 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL543_01700 37ce5a6677b371e3e189992205b6700f 330 Gene3D G3DSA:2.40.160.10 22 330 1.4E-62 T 11-10-2018 IPR023614 Porin domain superfamily AL543_01700 37ce5a6677b371e3e189992205b6700f 330 SUPERFAMILY SSF56935 22 330 1.57E-52 T 11-10-2018 AL543_01700 37ce5a6677b371e3e189992205b6700f 330 Pfam PF13609 Gram-negative porin 7 311 1.0E-29 T 11-10-2018 AL543_04665 7b7c7ccff36da92cb6a96a04826d552e 320 Gene3D G3DSA:1.50.10.150 5 308 1.7E-31 T 11-10-2018 IPR038665 Voltage-dependent anion channel superfamily AL543_04665 7b7c7ccff36da92cb6a96a04826d552e 320 Pfam PF03595 Voltage-dependent anion channel 11 303 1.7E-21 T 11-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 AL543_12765 d999fac325886e58e813066f288a50db 648 SUPERFAMILY SSF56935 35 648 7.16E-114 T 11-10-2018 AL543_12765 d999fac325886e58e813066f288a50db 648 Gene3D G3DSA:2.170.130.10 35 167 4.2E-34 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AL543_12765 d999fac325886e58e813066f288a50db 648 Gene3D G3DSA:2.40.170.20 173 648 8.0E-107 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AL543_12765 d999fac325886e58e813066f288a50db 648 Pfam PF07715 TonB-dependent Receptor Plug Domain 50 162 2.6E-25 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AL543_12765 d999fac325886e58e813066f288a50db 648 Pfam PF00593 TonB dependent receptor 214 646 2.9E-46 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AL543_06225 018e75fed7bafb445b674cac2e0652ce 430 Pfam PF00860 Permease family 17 391 1.1E-55 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 AL543_06225 018e75fed7bafb445b674cac2e0652ce 430 PIRSF PIRSF005353 1 430 5.6E-186 T 11-10-2018 IPR026033 Purine permease PbuG-like AL543_00450 e78baf849de4e05426f50d08b81d0e0d 277 Gene3D G3DSA:3.40.50.1980 19 137 9.7E-34 T 11-10-2018 AL543_00450 e78baf849de4e05426f50d08b81d0e0d 277 SUPERFAMILY SSF53807 23 277 1.06E-46 T 11-10-2018 AL543_00450 e78baf849de4e05426f50d08b81d0e0d 277 Gene3D G3DSA:3.40.50.1980 138 277 4.9E-42 T 11-10-2018 AL543_00450 e78baf849de4e05426f50d08b81d0e0d 277 Pfam PF01497 Periplasmic binding protein 25 252 1.3E-38 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain AL543_06205 84d637ef43716419581e9c92fda8ec7a 377 SUPERFAMILY SSF53633 13 262 1.96E-67 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AL543_06205 84d637ef43716419581e9c92fda8ec7a 377 ProSitePatterns PS00902 Glutamate 5-kinase signature. 214 231 - T 11-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AL543_06205 84d637ef43716419581e9c92fda8ec7a 377 Pfam PF00696 Amino acid kinase family 13 241 9.1E-44 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AL543_06205 84d637ef43716419581e9c92fda8ec7a 377 SUPERFAMILY SSF88697 284 374 1.99E-24 T 11-10-2018 IPR015947 PUA-like superfamily AL543_06205 84d637ef43716419581e9c92fda8ec7a 377 Pfam PF01472 PUA domain 284 358 3.7E-24 T 11-10-2018 IPR002478 PUA domain GO:0003723 AL543_06205 84d637ef43716419581e9c92fda8ec7a 377 PIRSF PIRSF000729 7 376 1.2E-137 T 11-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 AL543_06205 84d637ef43716419581e9c92fda8ec7a 377 TIGRFAM TIGR01027 proB: glutamate 5-kinase 12 374 1.3E-148 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AL543_06205 84d637ef43716419581e9c92fda8ec7a 377 PRINTS PR00474 Glutamate 5-kinase family signature 49 63 5.0E-55 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AL543_06205 84d637ef43716419581e9c92fda8ec7a 377 PRINTS PR00474 Glutamate 5-kinase family signature 123 144 5.0E-55 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AL543_06205 84d637ef43716419581e9c92fda8ec7a 377 PRINTS PR00474 Glutamate 5-kinase family signature 155 182 5.0E-55 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AL543_06205 84d637ef43716419581e9c92fda8ec7a 377 PRINTS PR00474 Glutamate 5-kinase family signature 216 236 5.0E-55 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AL543_06205 84d637ef43716419581e9c92fda8ec7a 377 PRINTS PR00474 Glutamate 5-kinase family signature 83 111 5.0E-55 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AL543_06205 84d637ef43716419581e9c92fda8ec7a 377 Gene3D G3DSA:3.40.1160.10 2 272 2.9E-89 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AL543_06205 84d637ef43716419581e9c92fda8ec7a 377 SMART SM00359 284 367 2.2E-20 T 11-10-2018 IPR002478 PUA domain GO:0003723 AL543_06205 84d637ef43716419581e9c92fda8ec7a 377 Hamap MF_00456 Glutamate 5-kinase [proB]. 12 268 36.374 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AL543_06205 84d637ef43716419581e9c92fda8ec7a 377 Gene3D G3DSA:2.30.130.10 273 375 2.6E-33 T 11-10-2018 IPR036974 PUA domain superfamily GO:0003723 AL543_18600 63909f3f5ef09db40ad749246be39959 288 Gene3D G3DSA:3.90.1200.10 108 282 1.4E-13 T 11-10-2018 AL543_18600 63909f3f5ef09db40ad749246be39959 288 SUPERFAMILY SSF56112 31 269 9.33E-31 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AL543_18600 63909f3f5ef09db40ad749246be39959 288 Pfam PF01636 Phosphotransferase enzyme family 33 226 1.3E-9 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase AL543_08080 70d379c8557808ecec9c8df5eb739bff 378 SUPERFAMILY SSF53187 4 377 6.29E-53 T 11-10-2018 AL543_08080 70d379c8557808ecec9c8df5eb739bff 378 SUPERFAMILY SSF55031 177 290 2.54E-23 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AL543_08080 70d379c8557808ecec9c8df5eb739bff 378 Pfam PF07687 Peptidase dimerisation domain 174 285 3.6E-25 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain AL543_08080 70d379c8557808ecec9c8df5eb739bff 378 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 106 143 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AL543_08080 70d379c8557808ecec9c8df5eb739bff 378 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 71 80 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AL543_08080 70d379c8557808ecec9c8df5eb739bff 378 Gene3D G3DSA:3.30.70.360 177 292 1.2E-77 T 11-10-2018 AL543_08080 70d379c8557808ecec9c8df5eb739bff 378 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 8 372 3.2E-123 T 11-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 AL543_08080 70d379c8557808ecec9c8df5eb739bff 378 Hamap MF_01108 Acetylornithine deacetylase [argE]. 1 378 62.31 T 11-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 AL543_08080 70d379c8557808ecec9c8df5eb739bff 378 Gene3D G3DSA:3.40.630.10 25 360 1.2E-77 T 11-10-2018 AL543_08080 70d379c8557808ecec9c8df5eb739bff 378 Pfam PF01546 Peptidase family M20/M25/M40 72 374 2.1E-31 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 AL543_06860 287a3089e123f02a9ff74d18972a5347 886 SUPERFAMILY SSF52922 701 885 7.85E-59 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AL543_06860 287a3089e123f02a9ff74d18972a5347 886 Gene3D G3DSA:3.40.50.970 473 705 1.3E-108 T 11-10-2018 AL543_06860 287a3089e123f02a9ff74d18972a5347 886 Gene3D G3DSA:3.40.50.920 706 886 3.4E-71 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AL543_06860 287a3089e123f02a9ff74d18972a5347 886 Gene3D G3DSA:3.40.50.970 55 471 1.1E-132 T 11-10-2018 AL543_06860 287a3089e123f02a9ff74d18972a5347 886 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 4 885 0.0 T 11-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 AL543_06860 287a3089e123f02a9ff74d18972a5347 886 PIRSF PIRSF000156 1 886 0.0 T 11-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 AL543_06860 287a3089e123f02a9ff74d18972a5347 886 SUPERFAMILY SSF52518 56 469 8.73E-140 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AL543_06860 287a3089e123f02a9ff74d18972a5347 886 SUPERFAMILY SSF52518 475 700 2.83E-96 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AL543_06860 287a3089e123f02a9ff74d18972a5347 886 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 104 294 3.3E-9 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL543_06860 287a3089e123f02a9ff74d18972a5347 886 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 360 426 1.4E-4 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL543_06720 3c964c8170daa58fa814431212587741 286 Gene3D G3DSA:3.40.190.10 91 265 3.9E-10 T 11-10-2018 AL543_06720 3c964c8170daa58fa814431212587741 286 Gene3D G3DSA:1.10.10.10 4 68 2.3E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_06720 3c964c8170daa58fa814431212587741 286 SUPERFAMILY SSF53850 90 280 1.21E-21 T 11-10-2018 AL543_06720 3c964c8170daa58fa814431212587741 286 Gene3D G3DSA:3.40.190.10 161 251 3.9E-10 T 11-10-2018 AL543_06720 3c964c8170daa58fa814431212587741 286 SUPERFAMILY SSF46785 4 85 7.56E-12 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_06720 3c964c8170daa58fa814431212587741 286 Pfam PF03466 LysR substrate binding domain 90 276 3.3E-20 T 11-10-2018 IPR005119 LysR, substrate-binding AL543_06720 3c964c8170daa58fa814431212587741 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 5.6E-13 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_17755 04c862f1b6139f1455736c4d7c3726bf 820 Gene3D G3DSA:2.40.40.20 649 813 1.2E-47 T 11-10-2018 AL543_17755 04c862f1b6139f1455736c4d7c3726bf 820 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 30 3.4E-4 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AL543_17755 04c862f1b6139f1455736c4d7c3726bf 820 Gene3D G3DSA:3.40.50.740 87 569 1.4E-238 T 11-10-2018 AL543_17755 04c862f1b6139f1455736c4d7c3726bf 820 SUPERFAMILY SSF50692 669 816 3.39E-42 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily AL543_17755 04c862f1b6139f1455736c4d7c3726bf 820 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 503 520 - T 11-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AL543_17755 04c862f1b6139f1455736c4d7c3726bf 820 Gene3D G3DSA:3.40.228.10 179 641 1.4E-238 T 11-10-2018 AL543_17755 04c862f1b6139f1455736c4d7c3726bf 820 TIGRFAM TIGR02164 torA: trimethylamine-N-oxide reductase TorA 1 820 0.0 T 11-10-2018 IPR011887 Trimethylamine-N-oxide reductase TorA GO:0030151|GO:0042597|GO:0050626 AL543_17755 04c862f1b6139f1455736c4d7c3726bf 820 Pfam PF00384 Molybdopterin oxidoreductase 87 560 6.9E-79 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL543_17755 04c862f1b6139f1455736c4d7c3726bf 820 Pfam PF01568 Molydopterin dinucleotide binding domain 676 796 1.4E-23 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 AL543_17755 04c862f1b6139f1455736c4d7c3726bf 820 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 716 743 - T 11-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AL543_17755 04c862f1b6139f1455736c4d7c3726bf 820 Gene3D G3DSA:3.90.55.10 81 615 1.4E-238 T 11-10-2018 AL543_17755 04c862f1b6139f1455736c4d7c3726bf 820 SUPERFAMILY SSF53706 42 660 6.28E-167 T 11-10-2018 AL543_05960 6a368bade0773ff17c4ee77df8ea6ab7 300 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 117 275 2.3E-33 T 11-10-2018 IPR000160 GGDEF domain AL543_05960 6a368bade0773ff17c4ee77df8ea6ab7 300 SUPERFAMILY SSF55073 123 278 1.65E-38 T 11-10-2018 IPR029787 Nucleotide cyclase AL543_05960 6a368bade0773ff17c4ee77df8ea6ab7 300 Pfam PF00990 Diguanylate cyclase, GGDEF domain 120 273 7.6E-34 T 11-10-2018 IPR000160 GGDEF domain AL543_05960 6a368bade0773ff17c4ee77df8ea6ab7 300 Gene3D G3DSA:3.30.70.270 116 290 7.5E-46 T 11-10-2018 AL543_05960 6a368bade0773ff17c4ee77df8ea6ab7 300 SMART SM00267 107 277 2.2E-37 T 11-10-2018 IPR000160 GGDEF domain AL543_17100 70765d2268ea6a11864aef545bb2a7fa 425 Pfam PF02687 FtsX-like permease family 320 418 8.7E-11 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AL543_17100 70765d2268ea6a11864aef545bb2a7fa 425 Pfam PF12704 MacB-like periplasmic core domain 20 224 8.8E-23 T 11-10-2018 IPR025857 MacB-like periplasmic core domain AL543_14065 9bd5a924fd8f481124a9d1728c164198 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 9.3E-15 T 11-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 AL543_14065 9bd5a924fd8f481124a9d1728c164198 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 11-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AL543_14065 9bd5a924fd8f481124a9d1728c164198 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 1.1E-75 T 11-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 AL543_14065 9bd5a924fd8f481124a9d1728c164198 214 PRINTS PR00094 Adenylate kinase signature 4 17 7.4E-36 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AL543_14065 9bd5a924fd8f481124a9d1728c164198 214 PRINTS PR00094 Adenylate kinase signature 32 46 7.4E-36 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AL543_14065 9bd5a924fd8f481124a9d1728c164198 214 PRINTS PR00094 Adenylate kinase signature 173 187 7.4E-36 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AL543_14065 9bd5a924fd8f481124a9d1728c164198 214 PRINTS PR00094 Adenylate kinase signature 156 171 7.4E-36 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AL543_14065 9bd5a924fd8f481124a9d1728c164198 214 PRINTS PR00094 Adenylate kinase signature 81 97 7.4E-36 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AL543_14065 9bd5a924fd8f481124a9d1728c164198 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 52.31 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AL543_14065 9bd5a924fd8f481124a9d1728c164198 214 Gene3D G3DSA:3.40.50.300 1 214 1.9E-78 T 11-10-2018 AL543_14065 9bd5a924fd8f481124a9d1728c164198 214 Pfam PF00406 Adenylate kinase 5 185 7.0E-60 T 11-10-2018 AL543_14065 9bd5a924fd8f481124a9d1728c164198 214 SUPERFAMILY SSF52540 1 213 2.61E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_20280 6166958b73930e78cb8e80a8426883a4 379 Gene3D G3DSA:1.10.8.410 330 379 6.1E-22 T 11-10-2018 AL543_20280 6166958b73930e78cb8e80a8426883a4 379 PRINTS PR00207 Flagellin signature 76 95 2.4E-25 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL543_20280 6166958b73930e78cb8e80a8426883a4 379 PRINTS PR00207 Flagellin signature 111 134 2.4E-25 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL543_20280 6166958b73930e78cb8e80a8426883a4 379 PRINTS PR00207 Flagellin signature 37 54 2.4E-25 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL543_20280 6166958b73930e78cb8e80a8426883a4 379 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 5.2E-43 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL543_20280 6166958b73930e78cb8e80a8426883a4 379 SUPERFAMILY SSF64518 1 379 1.83E-99 T 11-10-2018 AL543_20280 6166958b73930e78cb8e80a8426883a4 379 Pfam PF00700 Bacterial flagellin C-terminal helical region 294 378 2.4E-26 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL543_20280 6166958b73930e78cb8e80a8426883a4 379 Pfam PF07196 Flagellin hook IN motif 197 246 8.5E-8 T 11-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 AL543_20280 6166958b73930e78cb8e80a8426883a4 379 Gene3D G3DSA:1.20.1330.10 44 329 1.0E-77 T 11-10-2018 AL543_20280 6166958b73930e78cb8e80a8426883a4 379 Gene3D G3DSA:3.30.70.2120 174 277 1.0E-77 T 11-10-2018 AL543_19980 dafe11d09839eafa684bb9d9b84301be 488 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 161 174 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL543_19980 dafe11d09839eafa684bb9d9b84301be 488 SUPERFAMILY SSF46689 349 486 4.48E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_19980 dafe11d09839eafa684bb9d9b84301be 488 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 223 238 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL543_19980 dafe11d09839eafa684bb9d9b84301be 488 SMART SM00382 157 301 1.3E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_19980 dafe11d09839eafa684bb9d9b84301be 488 Pfam PF02954 Bacterial regulatory protein, Fis family 444 484 4.5E-14 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL543_19980 dafe11d09839eafa684bb9d9b84301be 488 Gene3D G3DSA:1.10.10.60 416 488 1.3E-12 T 11-10-2018 AL543_19980 dafe11d09839eafa684bb9d9b84301be 488 Gene3D G3DSA:1.10.8.60 309 385 2.5E-24 T 11-10-2018 AL543_19980 dafe11d09839eafa684bb9d9b84301be 488 Gene3D G3DSA:3.40.50.300 125 308 8.3E-69 T 11-10-2018 AL543_19980 dafe11d09839eafa684bb9d9b84301be 488 SUPERFAMILY SSF52172 6 182 5.98E-7 T 11-10-2018 IPR011006 CheY-like superfamily AL543_19980 dafe11d09839eafa684bb9d9b84301be 488 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 349 358 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AL543_19980 dafe11d09839eafa684bb9d9b84301be 488 SUPERFAMILY SSF52540 137 378 4.58E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_19980 dafe11d09839eafa684bb9d9b84301be 488 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 450 467 1.8E-10 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL543_19980 dafe11d09839eafa684bb9d9b84301be 488 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 467 487 1.8E-10 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL543_19980 dafe11d09839eafa684bb9d9b84301be 488 Gene3D G3DSA:3.40.50.2300 1 120 2.8E-11 T 11-10-2018 AL543_19980 dafe11d09839eafa684bb9d9b84301be 488 Pfam PF00158 Sigma-54 interaction domain 137 304 6.1E-74 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL543_19980 dafe11d09839eafa684bb9d9b84301be 488 Pfam PF06490 Flagellar regulatory protein FleQ 6 115 3.6E-30 T 11-10-2018 IPR010518 Flagellar regulatory FleQ AL543_10035 4e3810ffc302620e74f8e9bf8f0ab8b9 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 1.1E-64 T 11-10-2018 AL543_10035 4e3810ffc302620e74f8e9bf8f0ab8b9 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 1.1E-64 T 11-10-2018 AL543_10035 4e3810ffc302620e74f8e9bf8f0ab8b9 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 336 357 1.1E-64 T 11-10-2018 AL543_10035 4e3810ffc302620e74f8e9bf8f0ab8b9 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 1.1E-64 T 11-10-2018 AL543_10035 4e3810ffc302620e74f8e9bf8f0ab8b9 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 425 445 1.1E-64 T 11-10-2018 AL543_10035 4e3810ffc302620e74f8e9bf8f0ab8b9 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.1E-64 T 11-10-2018 AL543_10035 4e3810ffc302620e74f8e9bf8f0ab8b9 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 1.1E-64 T 11-10-2018 AL543_10035 4e3810ffc302620e74f8e9bf8f0ab8b9 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 1.1E-64 T 11-10-2018 AL543_10035 4e3810ffc302620e74f8e9bf8f0ab8b9 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 403 418 1.1E-64 T 11-10-2018 AL543_10035 4e3810ffc302620e74f8e9bf8f0ab8b9 450 Gene3D G3DSA:3.50.50.60 5 315 1.4E-123 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_10035 4e3810ffc302620e74f8e9bf8f0ab8b9 450 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 4 450 1.7E-214 T 11-10-2018 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 AL543_10035 4e3810ffc302620e74f8e9bf8f0ab8b9 450 SUPERFAMILY SSF55424 337 450 4.64E-34 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AL543_10035 4e3810ffc302620e74f8e9bf8f0ab8b9 450 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 319 1.2E-69 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL543_10035 4e3810ffc302620e74f8e9bf8f0ab8b9 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 2.8E-28 T 11-10-2018 AL543_10035 4e3810ffc302620e74f8e9bf8f0ab8b9 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 2.8E-28 T 11-10-2018 AL543_10035 4e3810ffc302620e74f8e9bf8f0ab8b9 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 2.8E-28 T 11-10-2018 AL543_10035 4e3810ffc302620e74f8e9bf8f0ab8b9 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 2.8E-28 T 11-10-2018 AL543_10035 4e3810ffc302620e74f8e9bf8f0ab8b9 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 2.8E-28 T 11-10-2018 AL543_10035 4e3810ffc302620e74f8e9bf8f0ab8b9 450 Gene3D G3DSA:3.30.390.30 339 450 3.9E-46 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AL543_10035 4e3810ffc302620e74f8e9bf8f0ab8b9 450 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AL543_10035 4e3810ffc302620e74f8e9bf8f0ab8b9 450 PIRSF PIRSF000350 1 445 8.2E-82 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 AL543_10035 4e3810ffc302620e74f8e9bf8f0ab8b9 450 Gene3D G3DSA:3.50.50.60 144 261 1.4E-123 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_10035 4e3810ffc302620e74f8e9bf8f0ab8b9 450 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 340 448 5.4E-32 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AL543_10035 4e3810ffc302620e74f8e9bf8f0ab8b9 450 SUPERFAMILY SSF51905 1 361 1.68E-57 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_14230 06d4b0c47d8e90090aee0129ae32db68 113 Gene3D G3DSA:1.20.120.160 1 111 8.6E-22 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AL543_14230 06d4b0c47d8e90090aee0129ae32db68 113 SUPERFAMILY SSF47226 3 111 5.36E-20 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AL543_14230 06d4b0c47d8e90090aee0129ae32db68 113 Pfam PF01627 Hpt domain 25 103 4.0E-8 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AL543_13240 284a750117c88fd4645f6e32fd8bc759 433 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 20 430 2.8E-158 T 11-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 AL543_13240 284a750117c88fd4645f6e32fd8bc759 433 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 19 426 1.8E-179 T 11-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 AL543_13240 284a750117c88fd4645f6e32fd8bc759 433 PIRSF PIRSF015658 1 432 4.2E-174 T 11-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 AL543_11930 c1ad0b3b751ffbaa6887ebba8c3656a5 424 SMART SM01091 342 420 1.1E-22 T 11-10-2018 IPR005170 Transporter-associated domain AL543_11930 c1ad0b3b751ffbaa6887ebba8c3656a5 424 Pfam PF01595 Domain of unknown function DUF21 13 181 1.8E-49 T 11-10-2018 IPR002550 CNNM, transmembrane domain AL543_11930 c1ad0b3b751ffbaa6887ebba8c3656a5 424 SUPERFAMILY SSF56176 340 419 8.45E-20 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AL543_11930 c1ad0b3b751ffbaa6887ebba8c3656a5 424 Pfam PF03471 Transporter associated domain 344 418 8.1E-17 T 11-10-2018 IPR005170 Transporter-associated domain AL543_11930 c1ad0b3b751ffbaa6887ebba8c3656a5 424 Gene3D G3DSA:3.30.465.10 340 418 2.9E-27 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AL543_11930 c1ad0b3b751ffbaa6887ebba8c3656a5 424 Pfam PF00571 CBS domain 278 326 6.3E-4 T 11-10-2018 IPR000644 CBS domain AL543_11930 c1ad0b3b751ffbaa6887ebba8c3656a5 424 SUPERFAMILY SSF54631 192 329 2.02E-23 T 11-10-2018 AL543_11930 c1ad0b3b751ffbaa6887ebba8c3656a5 424 Gene3D G3DSA:3.10.580.10 201 330 4.0E-39 T 11-10-2018 AL543_04145 6001fc582fedb51e8e11f51cc24e6080 490 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 10 461 4.0E-39 T 11-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 AL543_04145 6001fc582fedb51e8e11f51cc24e6080 490 Pfam PF07690 Major Facilitator Superfamily 10 285 9.1E-13 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL543_04145 6001fc582fedb51e8e11f51cc24e6080 490 SUPERFAMILY SSF103473 8 474 5.1E-22 T 11-10-2018 IPR036259 MFS transporter superfamily AL543_04145 6001fc582fedb51e8e11f51cc24e6080 490 Gene3D G3DSA:1.20.1250.20 7 475 1.5E-62 T 11-10-2018 AL543_04310 e2733f3c2e424b34ec6e8c5d5412f58f 369 Gene3D G3DSA:3.30.360.10 126 291 7.7E-105 T 11-10-2018 AL543_04310 e2733f3c2e424b34ec6e8c5d5412f58f 369 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 6 122 4.1E-20 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AL543_04310 e2733f3c2e424b34ec6e8c5d5412f58f 369 TIGRFAM TIGR01761 thiaz-red: thiazolinyl imide reductase 4 343 4.3E-96 T 11-10-2018 IPR010091 Thiazolinyl imide reductase AL543_04310 e2733f3c2e424b34ec6e8c5d5412f58f 369 SUPERFAMILY SSF51735 5 139 4.99E-9 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_04310 e2733f3c2e424b34ec6e8c5d5412f58f 369 Gene3D G3DSA:3.40.50.720 6 339 7.7E-105 T 11-10-2018 AL543_04310 e2733f3c2e424b34ec6e8c5d5412f58f 369 PIRSF PIRSF017494 1 363 1.5E-131 T 11-10-2018 IPR010091 Thiazolinyl imide reductase AL543_14325 103e9d3862bceb227ff38615e6ca50ff 155 Gene3D G3DSA:3.40.50.2300 1 155 7.8E-63 T 11-10-2018 AL543_14325 103e9d3862bceb227ff38615e6ca50ff 155 SUPERFAMILY SSF52788 1 149 2.49E-46 T 11-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily AL543_14325 103e9d3862bceb227ff38615e6ca50ff 155 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 146 9.7E-36 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I AL543_14325 103e9d3862bceb227ff38615e6ca50ff 155 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 120 135 1.4E-21 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AL543_14325 103e9d3862bceb227ff38615e6ca50ff 155 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 1.4E-21 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AL543_14325 103e9d3862bceb227ff38615e6ca50ff 155 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 45 61 1.4E-21 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AL543_14325 103e9d3862bceb227ff38615e6ca50ff 155 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 79 94 1.4E-21 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AL543_14325 103e9d3862bceb227ff38615e6ca50ff 155 SMART SM00226 2 148 9.4E-37 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I AL543_07540 2840b298ed59ea90a6c9f3ece8b2c280 453 Gene3D G3DSA:1.25.60.10 9 134 6.6E-20 T 11-10-2018 IPR038076 MgtE, N-terminal domain superfamily AL543_07540 2840b298ed59ea90a6c9f3ece8b2c280 453 Gene3D G3DSA:1.10.357.20 277 452 1.0E-45 T 11-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain AL543_07540 2840b298ed59ea90a6c9f3ece8b2c280 453 SUPERFAMILY SSF161093 280 451 2.62E-44 T 11-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 AL543_07540 2840b298ed59ea90a6c9f3ece8b2c280 453 SUPERFAMILY SSF158791 13 136 3.53E-30 T 11-10-2018 AL543_07540 2840b298ed59ea90a6c9f3ece8b2c280 453 SMART SM00924 36 139 7.8E-36 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain AL543_07540 2840b298ed59ea90a6c9f3ece8b2c280 453 SUPERFAMILY SSF54631 138 278 1.64E-28 T 11-10-2018 AL543_07540 2840b298ed59ea90a6c9f3ece8b2c280 453 Pfam PF03448 MgtE intracellular N domain 36 137 4.5E-26 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain AL543_07540 2840b298ed59ea90a6c9f3ece8b2c280 453 TIGRFAM TIGR00400 mgtE: magnesium transporter 12 453 2.6E-88 T 11-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 AL543_07540 2840b298ed59ea90a6c9f3ece8b2c280 453 Pfam PF01769 Divalent cation transporter 323 444 1.7E-23 T 11-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AL543_07540 2840b298ed59ea90a6c9f3ece8b2c280 453 Gene3D G3DSA:3.10.580.10 135 262 2.1E-37 T 11-10-2018 AL543_07540 2840b298ed59ea90a6c9f3ece8b2c280 453 Pfam PF00571 CBS domain 140 195 1.6E-4 T 11-10-2018 IPR000644 CBS domain AL543_07540 2840b298ed59ea90a6c9f3ece8b2c280 453 Pfam PF00571 CBS domain 213 257 2.6E-4 T 11-10-2018 IPR000644 CBS domain AL543_13990 1f7fb3787eb60378268127a60b44c7da 670 SMART SM00278 544 563 110.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AL543_13990 1f7fb3787eb60378268127a60b44c7da 670 SMART SM00278 512 531 350.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AL543_13990 1f7fb3787eb60378268127a60b44c7da 670 SMART SM00278 446 465 41.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AL543_13990 1f7fb3787eb60378268127a60b44c7da 670 SMART SM00278 480 499 16.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AL543_13990 1f7fb3787eb60378268127a60b44c7da 670 Gene3D G3DSA:1.10.287.610 1 68 1.7E-27 T 11-10-2018 AL543_13990 1f7fb3787eb60378268127a60b44c7da 670 SMART SM00532 3 448 1.5E-277 T 11-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 AL543_13990 1f7fb3787eb60378268127a60b44c7da 670 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 3 318 4.1E-131 T 11-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 AL543_13990 1f7fb3787eb60378268127a60b44c7da 670 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 11 664 2.9E-263 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AL543_13990 1f7fb3787eb60378268127a60b44c7da 670 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 322 396 2.2E-35 T 11-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 AL543_13990 1f7fb3787eb60378268127a60b44c7da 670 SUPERFAMILY SSF52113 596 669 4.94E-17 T 11-10-2018 IPR036420 BRCT domain superfamily AL543_13990 1f7fb3787eb60378268127a60b44c7da 670 SUPERFAMILY SSF50249 318 399 8.74E-29 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL543_13990 1f7fb3787eb60378268127a60b44c7da 670 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 331 346 - T 11-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site AL543_13990 1f7fb3787eb60378268127a60b44c7da 670 SUPERFAMILY SSF47781 403 583 1.52E-60 T 11-10-2018 IPR010994 RuvA domain 2-like AL543_13990 1f7fb3787eb60378268127a60b44c7da 670 SUPERFAMILY SSF56091 2 316 9.5E-123 T 11-10-2018 AL543_13990 1f7fb3787eb60378268127a60b44c7da 670 Gene3D G3DSA:3.40.50.10190 587 670 2.1E-24 T 11-10-2018 IPR036420 BRCT domain superfamily AL543_13990 1f7fb3787eb60378268127a60b44c7da 670 Pfam PF14520 Helix-hairpin-helix domain 446 501 6.4E-6 T 11-10-2018 AL543_13990 1f7fb3787eb60378268127a60b44c7da 670 Hamap MF_01588 DNA ligase [ligA]. 2 669 52.694 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AL543_13990 1f7fb3787eb60378268127a60b44c7da 670 PIRSF PIRSF001604 1 670 3.8E-249 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AL543_13990 1f7fb3787eb60378268127a60b44c7da 670 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 598 667 2.9E-11 T 11-10-2018 IPR001357 BRCT domain AL543_13990 1f7fb3787eb60378268127a60b44c7da 670 Gene3D G3DSA:1.10.150.20 506 586 2.0E-27 T 11-10-2018 AL543_13990 1f7fb3787eb60378268127a60b44c7da 670 Pfam PF12826 Helix-hairpin-helix motif 510 573 3.8E-21 T 11-10-2018 AL543_13990 1f7fb3787eb60378268127a60b44c7da 670 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 115 144 - T 11-10-2018 IPR018239 NAD-dependent DNA ligase, active site AL543_13990 1f7fb3787eb60378268127a60b44c7da 670 Gene3D G3DSA:2.40.50.140 318 390 2.1E-34 T 11-10-2018 AL543_13990 1f7fb3787eb60378268127a60b44c7da 670 SMART SM00292 595 670 1.5E-10 T 11-10-2018 IPR001357 BRCT domain AL543_13990 1f7fb3787eb60378268127a60b44c7da 670 Gene3D G3DSA:3.30.470.90 69 317 9.4E-101 T 11-10-2018 AL543_13990 1f7fb3787eb60378268127a60b44c7da 670 Gene3D G3DSA:1.10.150.20 432 505 3.9E-30 T 11-10-2018 AL543_13990 1f7fb3787eb60378268127a60b44c7da 670 Gene3D G3DSA:2.20.70.80 391 431 4.8E-19 T 11-10-2018 AL543_13990 1f7fb3787eb60378268127a60b44c7da 670 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 408 434 1.9E-9 T 11-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 AL543_13515 9601e5758827013200992fedcd240315 85 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 79 9.9E-20 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_13515 9601e5758827013200992fedcd240315 85 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 27.595 T 11-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_13515 9601e5758827013200992fedcd240315 85 ProSitePatterns PS01143 Ribosomal protein L31 signature. 48 69 - T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_13515 9601e5758827013200992fedcd240315 85 Pfam PF01197 Ribosomal protein L31 1 78 1.5E-27 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_13515 9601e5758827013200992fedcd240315 85 PRINTS PR01249 Ribosomal protein L31 signature 44 59 2.4E-16 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_13515 9601e5758827013200992fedcd240315 85 PRINTS PR01249 Ribosomal protein L31 signature 59 77 2.4E-16 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_13515 9601e5758827013200992fedcd240315 85 PRINTS PR01249 Ribosomal protein L31 signature 2 19 2.4E-16 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_13515 9601e5758827013200992fedcd240315 85 Gene3D G3DSA:2.30.170.50 1 83 1.9E-25 T 11-10-2018 AL543_13515 9601e5758827013200992fedcd240315 85 SUPERFAMILY SSF143800 1 80 3.57E-23 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_15700 cc083eacf113d3230e2aed7121984bea 182 Gene3D G3DSA:3.30.1380.10 59 182 4.7E-13 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AL543_15700 cc083eacf113d3230e2aed7121984bea 182 Pfam PF05951 Bacterial protein of unknown function (DUF882) 30 179 1.7E-73 T 11-10-2018 IPR010275 Protein of unknown function DUF882 AL543_15700 cc083eacf113d3230e2aed7121984bea 182 SUPERFAMILY SSF55166 52 179 4.19E-35 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AL543_15700 cc083eacf113d3230e2aed7121984bea 182 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 28 2.6E-4 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AL543_12505 ef043ecd946922a00af6482e2dd05c22 382 Pfam PF02690 Na+/Pi-cotransporter 218 326 8.7E-19 T 11-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 AL543_12505 ef043ecd946922a00af6482e2dd05c22 382 Pfam PF02690 Na+/Pi-cotransporter 30 150 1.5E-22 T 11-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 AL543_00980 b43b5c3ae160f54d4cc50a9a8a3ba720 310 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 33 94 1.5E-9 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AL543_00980 b43b5c3ae160f54d4cc50a9a8a3ba720 310 SMART SM00829 16 308 2.2E-25 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AL543_00980 b43b5c3ae160f54d4cc50a9a8a3ba720 310 Gene3D G3DSA:3.90.180.10 13 307 4.6E-89 T 11-10-2018 AL543_00980 b43b5c3ae160f54d4cc50a9a8a3ba720 310 SUPERFAMILY SSF50129 4 155 1.67E-41 T 11-10-2018 IPR011032 GroES-like superfamily AL543_00980 b43b5c3ae160f54d4cc50a9a8a3ba720 310 Pfam PF13602 Zinc-binding dehydrogenase 192 308 8.8E-18 T 11-10-2018 AL543_00980 b43b5c3ae160f54d4cc50a9a8a3ba720 310 SUPERFAMILY SSF51735 122 248 4.41E-30 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_00980 b43b5c3ae160f54d4cc50a9a8a3ba720 310 Gene3D G3DSA:3.40.50.720 133 259 4.6E-89 T 11-10-2018 AL543_10940 84dbd0c869bdbe4e29abb3925b6d384f 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 73 2.5E-38 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_10940 84dbd0c869bdbe4e29abb3925b6d384f 75 SUPERFAMILY SSF46911 3 74 3.66E-30 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_10940 84dbd0c869bdbe4e29abb3925b6d384f 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 11-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_10940 84dbd0c869bdbe4e29abb3925b6d384f 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 73 1.0E-23 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_10940 84dbd0c869bdbe4e29abb3925b6d384f 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 4.4E-19 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_10940 84dbd0c869bdbe4e29abb3925b6d384f 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 4.4E-19 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_10940 84dbd0c869bdbe4e29abb3925b6d384f 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 4.4E-19 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_10940 84dbd0c869bdbe4e29abb3925b6d384f 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 4.4E-19 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_10940 84dbd0c869bdbe4e29abb3925b6d384f 75 Gene3D G3DSA:4.10.640.10 20 75 1.1E-29 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_10940 84dbd0c869bdbe4e29abb3925b6d384f 75 Pfam PF01084 Ribosomal protein S18 19 68 3.0E-26 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_10940 84dbd0c869bdbe4e29abb3925b6d384f 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.803 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_07900 f4a1332e589072804b5d139f4a722310 196 SUPERFAMILY SSF52218 13 186 1.81E-50 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL543_07900 f4a1332e589072804b5d139f4a722310 196 Hamap MF_01415 Glutathione-regulated potassium-efflux system ancillary protein KefG [kefG]. 8 190 47.991 T 11-10-2018 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 AL543_07900 f4a1332e589072804b5d139f4a722310 196 Pfam PF02525 Flavodoxin-like fold 13 180 2.6E-45 T 11-10-2018 IPR003680 Flavodoxin-like fold AL543_07900 f4a1332e589072804b5d139f4a722310 196 Gene3D G3DSA:3.40.50.360 12 189 7.0E-56 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL543_07615 94659956822c1be545324282fa4c93ff 212 Gene3D G3DSA:3.30.1060.10 3 211 5.8E-91 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL543_07615 94659956822c1be545324282fa4c93ff 212 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 42 203 38.59 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL543_07615 94659956822c1be545324282fa4c93ff 212 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 44 197 2.2E-66 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL543_07615 94659956822c1be545324282fa4c93ff 212 Pfam PF01625 Peptide methionine sulfoxide reductase 44 197 4.4E-68 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL543_07615 94659956822c1be545324282fa4c93ff 212 SUPERFAMILY SSF55068 3 207 6.02E-81 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL543_16390 b2d7a3713e20c18c0a8427b093449a3e 81 Pfam PF11391 Protein of unknown function (DUF2798) 13 69 7.4E-19 T 11-10-2018 IPR021529 Protein of unknown function DUF2798 AL543_21085 9700b0105c03502d74694c160fe90a2d 42 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 2.5E-17 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL543_05865 48ca9c1f301b083c33a21d28af4704df 281 Pfam PF02311 AraC-like ligand binding domain 33 138 3.3E-8 T 11-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AL543_05865 48ca9c1f301b083c33a21d28af4704df 281 SUPERFAMILY SSF51215 30 158 1.31E-18 T 11-10-2018 IPR037923 Transcription regulator HTH-like AL543_05865 48ca9c1f301b083c33a21d28af4704df 281 Gene3D G3DSA:2.60.120.280 29 166 1.3E-10 T 11-10-2018 AL543_05865 48ca9c1f301b083c33a21d28af4704df 281 SMART SM00342 192 275 2.3E-27 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL543_05865 48ca9c1f301b083c33a21d28af4704df 281 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 229 271 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL543_05865 48ca9c1f301b083c33a21d28af4704df 281 Gene3D G3DSA:1.10.10.60 176 280 3.0E-24 T 11-10-2018 AL543_05865 48ca9c1f301b083c33a21d28af4704df 281 SUPERFAMILY SSF46689 228 277 3.23E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_05865 48ca9c1f301b083c33a21d28af4704df 281 Pfam PF12833 Helix-turn-helix domain 199 275 2.6E-18 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL543_09870 03757a7c52d64d93ffa50dd9a58b746a 368 SUPERFAMILY SSF111369 58 273 3.79E-40 T 11-10-2018 AL543_09870 03757a7c52d64d93ffa50dd9a58b746a 368 Gene3D G3DSA:2.40.50.100 68 196 2.2E-73 T 11-10-2018 AL543_09870 03757a7c52d64d93ffa50dd9a58b746a 368 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 353 3.1E-74 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL543_09870 03757a7c52d64d93ffa50dd9a58b746a 368 Gene3D G3DSA:2.40.30.170 58 279 2.2E-73 T 11-10-2018 AL543_09870 03757a7c52d64d93ffa50dd9a58b746a 368 Gene3D G3DSA:1.10.287.470 103 162 2.2E-73 T 11-10-2018 AL543_09870 03757a7c52d64d93ffa50dd9a58b746a 368 Gene3D G3DSA:2.40.420.20 280 351 2.2E-73 T 11-10-2018 AL543_09870 03757a7c52d64d93ffa50dd9a58b746a 368 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 269 3.6E-26 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL543_08590 7048263aef1169ed76e78d5a57e28842 841 Gene3D G3DSA:3.30.70.270 423 587 2.8E-32 T 11-10-2018 AL543_08590 7048263aef1169ed76e78d5a57e28842 841 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 422 566 8.9E-20 T 11-10-2018 IPR000160 GGDEF domain AL543_08590 7048263aef1169ed76e78d5a57e28842 841 SUPERFAMILY SSF141868 591 839 3.27E-83 T 11-10-2018 IPR035919 EAL domain superfamily AL543_08590 7048263aef1169ed76e78d5a57e28842 841 Pfam PF02743 Cache domain 49 323 1.2E-13 T 11-10-2018 IPR033479 Double Cache domain 1 AL543_08590 7048263aef1169ed76e78d5a57e28842 841 Gene3D G3DSA:1.20.1480.50 325 422 2.2E-7 T 11-10-2018 AL543_08590 7048263aef1169ed76e78d5a57e28842 841 Gene3D G3DSA:3.20.20.450 588 840 2.5E-89 T 11-10-2018 IPR035919 EAL domain superfamily AL543_08590 7048263aef1169ed76e78d5a57e28842 841 SUPERFAMILY SSF55073 427 567 6.75E-27 T 11-10-2018 IPR029787 Nucleotide cyclase AL543_08590 7048263aef1169ed76e78d5a57e28842 841 SUPERFAMILY SSF158472 364 413 3.53E-5 T 11-10-2018 AL543_08590 7048263aef1169ed76e78d5a57e28842 841 SMART SM00052 584 832 1.0E-107 T 11-10-2018 IPR001633 EAL domain AL543_08590 7048263aef1169ed76e78d5a57e28842 841 Pfam PF00563 EAL domain 591 827 6.7E-73 T 11-10-2018 IPR001633 EAL domain AL543_08590 7048263aef1169ed76e78d5a57e28842 841 Gene3D G3DSA:3.30.450.20 36 225 6.5E-10 T 11-10-2018 AL543_08590 7048263aef1169ed76e78d5a57e28842 841 Pfam PF00990 Diguanylate cyclase, GGDEF domain 424 567 3.3E-26 T 11-10-2018 IPR000160 GGDEF domain AL543_08590 7048263aef1169ed76e78d5a57e28842 841 SMART SM00267 411 574 4.5E-30 T 11-10-2018 IPR000160 GGDEF domain AL543_10080 aabe861b1c5eaeb492ce7ad086461de7 611 Pfam PF00271 Helicase conserved C-terminal domain 229 333 5.1E-20 T 11-10-2018 IPR001650 Helicase, C-terminal AL543_10080 aabe861b1c5eaeb492ce7ad086461de7 611 SMART SM00956 414 517 1.4E-50 T 11-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 AL543_10080 aabe861b1c5eaeb492ce7ad086461de7 611 Gene3D G3DSA:1.10.10.10 344 526 6.0E-55 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_10080 aabe861b1c5eaeb492ce7ad086461de7 611 Pfam PF00270 DEAD/DEAH box helicase 33 188 1.9E-19 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL543_10080 aabe861b1c5eaeb492ce7ad086461de7 611 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 19 466 9.4E-191 T 11-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 AL543_10080 aabe861b1c5eaeb492ce7ad086461de7 611 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 18 606 1.0E-257 T 11-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 AL543_10080 aabe861b1c5eaeb492ce7ad086461de7 611 SMART SM00490 253 334 2.2E-29 T 11-10-2018 IPR001650 Helicase, C-terminal AL543_10080 aabe861b1c5eaeb492ce7ad086461de7 611 Gene3D G3DSA:1.10.150.80 527 609 1.7E-28 T 11-10-2018 AL543_10080 aabe861b1c5eaeb492ce7ad086461de7 611 SMART SM00487 25 221 4.7E-29 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL543_10080 aabe861b1c5eaeb492ce7ad086461de7 611 Pfam PF00570 HRDC domain 537 603 6.9E-23 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AL543_10080 aabe861b1c5eaeb492ce7ad086461de7 611 SUPERFAMILY SSF52540 211 457 1.48E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_10080 aabe861b1c5eaeb492ce7ad086461de7 611 Gene3D G3DSA:3.40.50.300 7 211 5.3E-83 T 11-10-2018 AL543_10080 aabe861b1c5eaeb492ce7ad086461de7 611 Pfam PF09382 RQC domain 409 517 5.0E-38 T 11-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 AL543_10080 aabe861b1c5eaeb492ce7ad086461de7 611 SUPERFAMILY SSF52540 17 202 4.09E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_10080 aabe861b1c5eaeb492ce7ad086461de7 611 Gene3D G3DSA:3.40.50.300 212 343 1.0E-42 T 11-10-2018 AL543_10080 aabe861b1c5eaeb492ce7ad086461de7 611 SUPERFAMILY SSF47819 534 608 4.14E-26 T 11-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 AL543_10080 aabe861b1c5eaeb492ce7ad086461de7 611 SMART SM00341 533 609 1.6E-23 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AL543_10080 aabe861b1c5eaeb492ce7ad086461de7 611 Pfam PF16124 RecQ zinc-binding 346 407 2.0E-17 T 11-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain AL543_00540 9330d8f18519adb9a21df4555e0d9790 375 TIGRFAM TIGR02085 meth_trns_rumB: 23S rRNA (uracil-5-)-methyltransferase RumB 2 374 1.1E-208 T 11-10-2018 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 AL543_00540 9330d8f18519adb9a21df4555e0d9790 375 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 307 338 - T 11-10-2018 IPR030390 RNA methyltransferase TrmA, active site AL543_00540 9330d8f18519adb9a21df4555e0d9790 375 Hamap MF_01012 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC [rlmC]. 1 375 82.783 T 11-10-2018 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 AL543_00540 9330d8f18519adb9a21df4555e0d9790 375 SUPERFAMILY SSF53335 3 374 4.6E-51 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL543_00540 9330d8f18519adb9a21df4555e0d9790 375 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 208 374 2.1E-18 T 11-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 AL543_00540 9330d8f18519adb9a21df4555e0d9790 375 Gene3D G3DSA:3.40.1350.30 56 211 2.8E-75 T 11-10-2018 AL543_00540 9330d8f18519adb9a21df4555e0d9790 375 Gene3D G3DSA:3.40.50.150 14 368 2.8E-75 T 11-10-2018 AL543_18015 ed783450597a5fd3bcb897b849299fd3 364 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 68 270 1.7E-18 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL543_18015 ed783450597a5fd3bcb897b849299fd3 364 Gene3D G3DSA:1.10.287.470 102 162 1.9E-78 T 11-10-2018 AL543_18015 ed783450597a5fd3bcb897b849299fd3 364 Gene3D G3DSA:2.40.30.170 54 278 1.9E-78 T 11-10-2018 AL543_18015 ed783450597a5fd3bcb897b849299fd3 364 SUPERFAMILY SSF111369 58 215 1.1E-25 T 11-10-2018 AL543_18015 ed783450597a5fd3bcb897b849299fd3 364 Gene3D G3DSA:2.40.50.100 68 201 1.9E-78 T 11-10-2018 AL543_18015 ed783450597a5fd3bcb897b849299fd3 364 Gene3D G3DSA:2.40.420.20 47 354 1.9E-78 T 11-10-2018 AL543_18015 ed783450597a5fd3bcb897b849299fd3 364 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 47 356 4.2E-70 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL543_15000 a039d2c803d3b5d685aa094063807405 210 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 122 209 5.2E-19 T 11-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 AL543_15000 a039d2c803d3b5d685aa094063807405 210 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 12 210 38.291 T 11-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 AL543_15000 a039d2c803d3b5d685aa094063807405 210 SUPERFAMILY SSF141734 13 123 1.12E-46 T 11-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 AL543_15000 a039d2c803d3b5d685aa094063807405 210 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 119 205 20.011 T 11-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 AL543_15000 a039d2c803d3b5d685aa094063807405 210 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 37 109 8.1E-33 T 11-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 AL543_15000 a039d2c803d3b5d685aa094063807405 210 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 60 109 5.0E-24 T 11-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 AL543_15000 a039d2c803d3b5d685aa094063807405 210 Gene3D G3DSA:3.10.20.400 6 101 3.8E-38 T 11-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 AL543_15000 a039d2c803d3b5d685aa094063807405 210 Gene3D G3DSA:1.10.287.1080 119 210 1.6E-30 T 11-10-2018 AL543_15000 a039d2c803d3b5d685aa094063807405 210 SUPERFAMILY SSF101386 122 210 1.03E-25 T 11-10-2018 AL543_15000 a039d2c803d3b5d685aa094063807405 210 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 122 205 1.8E-32 T 11-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 AL543_06975 a7bce70c29b9dc9449b9ebdcea48e6f4 438 SUPERFAMILY SSF56954 1 425 2.88E-91 T 11-10-2018 AL543_06975 a7bce70c29b9dc9449b9ebdcea48e6f4 438 Pfam PF02321 Outer membrane efflux protein 231 419 2.0E-34 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AL543_06975 a7bce70c29b9dc9449b9ebdcea48e6f4 438 Pfam PF02321 Outer membrane efflux protein 25 207 1.8E-26 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AL543_06975 a7bce70c29b9dc9449b9ebdcea48e6f4 438 Gene3D G3DSA:1.20.1600.10 23 437 1.7E-119 T 11-10-2018 AL543_06975 a7bce70c29b9dc9449b9ebdcea48e6f4 438 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 22 433 2.2E-109 T 11-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 AL543_17850 ffc29069fcfa18f1825e80bdebf524b4 819 Gene3D G3DSA:3.30.450.20 125 286 2.2E-18 T 11-10-2018 AL543_17850 ffc29069fcfa18f1825e80bdebf524b4 819 SUPERFAMILY SSF55785 136 235 8.2E-16 T 11-10-2018 IPR035965 PAS domain superfamily AL543_17850 ffc29069fcfa18f1825e80bdebf524b4 819 Gene3D G3DSA:3.20.20.450 412 673 6.7E-71 T 11-10-2018 IPR035919 EAL domain superfamily AL543_17850 ffc29069fcfa18f1825e80bdebf524b4 819 SUPERFAMILY SSF141868 420 666 1.44E-67 T 11-10-2018 IPR035919 EAL domain superfamily AL543_17850 ffc29069fcfa18f1825e80bdebf524b4 819 Pfam PF13426 PAS domain 137 236 1.2E-6 T 11-10-2018 IPR000014 PAS domain AL543_17850 ffc29069fcfa18f1825e80bdebf524b4 819 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 127 239 5.6E-12 T 11-10-2018 IPR000014 PAS domain AL543_17850 ffc29069fcfa18f1825e80bdebf524b4 819 SUPERFAMILY SSF54631 697 818 8.26E-9 T 11-10-2018 AL543_17850 ffc29069fcfa18f1825e80bdebf524b4 819 SMART SM00091 126 192 3.1E-4 T 11-10-2018 IPR000014 PAS domain AL543_17850 ffc29069fcfa18f1825e80bdebf524b4 819 Pfam PF00563 EAL domain 422 656 5.2E-62 T 11-10-2018 IPR001633 EAL domain AL543_17850 ffc29069fcfa18f1825e80bdebf524b4 819 SMART SM00052 414 661 3.4E-59 T 11-10-2018 IPR001633 EAL domain AL543_17850 ffc29069fcfa18f1825e80bdebf524b4 819 Gene3D G3DSA:3.10.580.10 688 817 5.4E-8 T 11-10-2018 AL543_09580 f7b0e058be43267c8c9f02aca7ed1405 366 SUPERFAMILY SSF55979 245 366 1.67E-36 T 11-10-2018 AL543_09580 f7b0e058be43267c8c9f02aca7ed1405 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 1.6E-37 T 11-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 AL543_09580 f7b0e058be43267c8c9f02aca7ed1405 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 1.9E-38 T 11-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 AL543_09580 f7b0e058be43267c8c9f02aca7ed1405 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 243 4.3E-34 T 11-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 AL543_09580 f7b0e058be43267c8c9f02aca7ed1405 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 1.4E-107 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 AL543_09580 f7b0e058be43267c8c9f02aca7ed1405 366 Gene3D G3DSA:3.10.150.10 248 366 3.8E-39 T 11-10-2018 AL543_09580 f7b0e058be43267c8c9f02aca7ed1405 366 Gene3D G3DSA:3.10.150.10 124 247 9.2E-35 T 11-10-2018 AL543_09580 f7b0e058be43267c8c9f02aca7ed1405 366 SMART SM00480 17 362 2.3E-140 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 AL543_09580 f7b0e058be43267c8c9f02aca7ed1405 366 PIRSF PIRSF000804 1 366 8.7E-118 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 AL543_09580 f7b0e058be43267c8c9f02aca7ed1405 366 SUPERFAMILY SSF55979 126 244 8.57E-28 T 11-10-2018 AL543_09580 f7b0e058be43267c8c9f02aca7ed1405 366 SUPERFAMILY SSF55979 1 118 1.03E-28 T 11-10-2018 AL543_09580 f7b0e058be43267c8c9f02aca7ed1405 366 Gene3D G3DSA:3.10.150.10 1 122 2.4E-41 T 11-10-2018 AL543_06150 cf4a404461776775c7c3394276bae5bc 881 Gene3D G3DSA:1.10.3210.10 439 589 1.4E-9 T 11-10-2018 AL543_06150 cf4a404461776775c7c3394276bae5bc 881 SUPERFAMILY SSF109604 423 558 1.54E-14 T 11-10-2018 AL543_06150 cf4a404461776775c7c3394276bae5bc 881 SUPERFAMILY SSF55021 694 767 1.53E-7 T 11-10-2018 AL543_06150 cf4a404461776775c7c3394276bae5bc 881 SMART SM00471 452 599 1.2E-10 T 11-10-2018 IPR003607 HD/PDEase domain AL543_06150 cf4a404461776775c7c3394276bae5bc 881 Pfam PF08335 GlnD PII-uridylyltransferase 181 319 7.5E-35 T 11-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AL543_06150 cf4a404461776775c7c3394276bae5bc 881 PIRSF PIRSF006288 10 880 0.0 T 11-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AL543_06150 cf4a404461776775c7c3394276bae5bc 881 SUPERFAMILY SSF81593 197 315 1.33E-9 T 11-10-2018 AL543_06150 cf4a404461776775c7c3394276bae5bc 881 Pfam PF01966 HD domain 457 589 1.9E-13 T 11-10-2018 IPR006674 HD domain AL543_06150 cf4a404461776775c7c3394276bae5bc 881 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 33 874 0.0 T 11-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AL543_06150 cf4a404461776775c7c3394276bae5bc 881 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 881 333.815 T 11-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AL543_06150 cf4a404461776775c7c3394276bae5bc 881 Pfam PF01909 Nucleotidyltransferase domain 62 113 1.4E-7 T 11-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 AL543_06150 cf4a404461776775c7c3394276bae5bc 881 SUPERFAMILY SSF81301 40 177 1.25E-18 T 11-10-2018 AL543_06150 cf4a404461776775c7c3394276bae5bc 881 SUPERFAMILY SSF55021 801 865 1.87E-8 T 11-10-2018 AL543_15805 58cb88ee4c7dd8feedbf56ea312b33f2 233 SMART SM00479 43 223 1.2E-22 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL543_15805 58cb88ee4c7dd8feedbf56ea312b33f2 233 Gene3D G3DSA:3.30.420.10 41 222 5.9E-37 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AL543_15805 58cb88ee4c7dd8feedbf56ea312b33f2 233 SUPERFAMILY SSF53098 37 220 3.11E-38 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_15805 58cb88ee4c7dd8feedbf56ea312b33f2 233 Pfam PF00929 Exonuclease 45 214 2.2E-18 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL543_19845 f17eaef06c7fcf8b622ed09fbbcaf27a 403 SMART SM00825 Beta-ketoacyl synthase 4 403 2.9E-15 T 11-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AL543_19845 f17eaef06c7fcf8b622ed09fbbcaf27a 403 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 244 1.1E-45 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AL543_19845 f17eaef06c7fcf8b622ed09fbbcaf27a 403 Gene3D G3DSA:3.40.47.10 258 401 1.8E-52 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL543_19845 f17eaef06c7fcf8b622ed09fbbcaf27a 403 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 358 3.2E-28 T 11-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AL543_19845 f17eaef06c7fcf8b622ed09fbbcaf27a 403 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 11-10-2018 IPR018201 Beta-ketoacyl synthase, active site AL543_19845 f17eaef06c7fcf8b622ed09fbbcaf27a 403 Gene3D G3DSA:3.40.47.10 6 257 4.6E-70 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL543_19845 f17eaef06c7fcf8b622ed09fbbcaf27a 403 SUPERFAMILY SSF53901 1 251 1.12E-66 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL543_19845 f17eaef06c7fcf8b622ed09fbbcaf27a 403 SUPERFAMILY SSF53901 213 401 7.82E-62 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL543_18245 1c32ffdb27ae40d70204efb603a667c4 99 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 4 87 9.3E-33 T 11-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 AL543_18245 1c32ffdb27ae40d70204efb603a667c4 99 SUPERFAMILY SSF52794 2 94 2.09E-32 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 AL543_18245 1c32ffdb27ae40d70204efb603a667c4 99 Gene3D G3DSA:3.40.50.2300 1 98 2.0E-36 T 11-10-2018 AL543_18245 1c32ffdb27ae40d70204efb603a667c4 99 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 94 2.1E-16 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL543_03545 caf2f1088326b7c40f707f2bb954a699 420 Gene3D G3DSA:3.40.50.2300 1 134 5.6E-33 T 11-10-2018 AL543_03545 caf2f1088326b7c40f707f2bb954a699 420 Gene3D G3DSA:1.10.10.60 352 414 1.2E-10 T 11-10-2018 AL543_03545 caf2f1088326b7c40f707f2bb954a699 420 SMART SM00448 3 114 4.7E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_03545 caf2f1088326b7c40f707f2bb954a699 420 Pfam PF00072 Response regulator receiver domain 5 114 4.9E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_03545 caf2f1088326b7c40f707f2bb954a699 420 SUPERFAMILY SSF52172 4 183 1.57E-35 T 11-10-2018 IPR011006 CheY-like superfamily AL543_03545 caf2f1088326b7c40f707f2bb954a699 420 SUPERFAMILY SSF52540 138 344 8.57E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_03545 caf2f1088326b7c40f707f2bb954a699 420 SUPERFAMILY SSF46689 359 412 7.62E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_03545 caf2f1088326b7c40f707f2bb954a699 420 Gene3D G3DSA:1.10.8.60 286 348 2.1E-16 T 11-10-2018 AL543_03545 caf2f1088326b7c40f707f2bb954a699 420 Pfam PF02954 Bacterial regulatory protein, Fis family 370 409 1.4E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL543_03545 caf2f1088326b7c40f707f2bb954a699 420 Pfam PF14532 Sigma-54 interaction domain 140 286 1.1E-15 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL543_03545 caf2f1088326b7c40f707f2bb954a699 420 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 328 337 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AL543_03545 caf2f1088326b7c40f707f2bb954a699 420 Gene3D G3DSA:3.40.50.300 137 285 3.5E-31 T 11-10-2018 AL543_06915 3f35b0c22feef1a867472b913e441c46 562 Gene3D G3DSA:3.30.450.90 151 288 5.6E-46 T 11-10-2018 AL543_06915 3f35b0c22feef1a867472b913e441c46 562 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 5 559 6.2E-241 T 11-10-2018 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 AL543_06915 3f35b0c22feef1a867472b913e441c46 562 SUPERFAMILY SSF52540 176 559 1.62E-96 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_06915 3f35b0c22feef1a867472b913e441c46 562 Gene3D G3DSA:3.30.300.160 64 140 4.0E-7 T 11-10-2018 AL543_06915 3f35b0c22feef1a867472b913e441c46 562 Pfam PF00437 Type II/IV secretion system protein 189 455 3.7E-88 T 11-10-2018 IPR001482 Type II/IV secretion system protein AL543_06915 3f35b0c22feef1a867472b913e441c46 562 Gene3D G3DSA:3.40.50.300 289 561 4.1E-105 T 11-10-2018 AL543_06915 3f35b0c22feef1a867472b913e441c46 562 SUPERFAMILY SSF160246 1 140 2.43E-31 T 11-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily AL543_06915 3f35b0c22feef1a867472b913e441c46 562 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 383 397 - T 11-10-2018 IPR001482 Type II/IV secretion system protein AL543_06915 3f35b0c22feef1a867472b913e441c46 562 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 38 141 2.9E-15 T 11-10-2018 IPR007831 General secretory system II, protein E, N-terminal AL543_12295 1b79c7a7165201911679d59cd2b4d0b4 650 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 192 324 6.7E-46 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL543_12295 1b79c7a7165201911679d59cd2b4d0b4 650 Pfam PF01434 Peptidase family M41 386 595 2.1E-80 T 11-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 AL543_12295 1b79c7a7165201911679d59cd2b4d0b4 650 Gene3D G3DSA:3.40.50.300 140 326 2.3E-70 T 11-10-2018 AL543_12295 1b79c7a7165201911679d59cd2b4d0b4 650 SUPERFAMILY SSF140990 406 601 1.83E-74 T 11-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 AL543_12295 1b79c7a7165201911679d59cd2b4d0b4 650 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 105 597 1.8E-242 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 AL543_12295 1b79c7a7165201911679d59cd2b4d0b4 650 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 626 37.2 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 AL543_12295 1b79c7a7165201911679d59cd2b4d0b4 650 Pfam PF06480 FtsH Extracellular 8 97 1.1E-12 T 11-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 AL543_12295 1b79c7a7165201911679d59cd2b4d0b4 650 SMART SM00382 188 327 3.6E-26 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_12295 1b79c7a7165201911679d59cd2b4d0b4 650 Gene3D G3DSA:1.10.8.60 327 403 1.1E-27 T 11-10-2018 AL543_12295 1b79c7a7165201911679d59cd2b4d0b4 650 Gene3D G3DSA:2.40.50.920 27 103 8.7E-30 T 11-10-2018 AL543_12295 1b79c7a7165201911679d59cd2b4d0b4 650 SUPERFAMILY SSF52540 147 395 2.56E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_12295 1b79c7a7165201911679d59cd2b4d0b4 650 Gene3D G3DSA:1.20.58.760 406 607 5.2E-71 T 11-10-2018 AL543_12295 1b79c7a7165201911679d59cd2b4d0b4 650 ProSitePatterns PS00674 AAA-protein family signature. 295 313 - T 11-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 AL543_11370 e3aad298f1f3d8c38241881c09c62f66 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 1.3E-44 T 11-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_11370 e3aad298f1f3d8c38241881c09c62f66 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.497 T 11-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_11370 e3aad298f1f3d8c38241881c09c62f66 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 11-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_11370 e3aad298f1f3d8c38241881c09c62f66 103 SUPERFAMILY SSF141091 1 102 9.94E-39 T 11-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_11370 e3aad298f1f3d8c38241881c09c62f66 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 2.8E-40 T 11-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_02045 39b23f94dbfef7e3d36c905d41ba32a4 215 Gene3D G3DSA:3.40.50.1000 8 189 5.8E-51 T 11-10-2018 IPR023214 HAD superfamily AL543_02045 39b23f94dbfef7e3d36c905d41ba32a4 215 Pfam PF13419 Haloacid dehalogenase-like hydrolase 10 185 7.5E-33 T 11-10-2018 AL543_02045 39b23f94dbfef7e3d36c905d41ba32a4 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 6 17 1.9E-9 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL543_02045 39b23f94dbfef7e3d36c905d41ba32a4 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 149 169 1.9E-9 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL543_02045 39b23f94dbfef7e3d36c905d41ba32a4 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 100 113 1.9E-9 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL543_02045 39b23f94dbfef7e3d36c905d41ba32a4 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 131 147 1.9E-9 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL543_02045 39b23f94dbfef7e3d36c905d41ba32a4 215 Gene3D G3DSA:1.10.150.240 20 83 5.8E-51 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AL543_02045 39b23f94dbfef7e3d36c905d41ba32a4 215 SUPERFAMILY SSF56784 4 215 1.96E-50 T 11-10-2018 IPR036412 HAD-like superfamily AL543_02045 39b23f94dbfef7e3d36c905d41ba32a4 215 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 84 185 2.5E-15 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL543_09085 1f5af0a4de8ac973df7ff7c9abbb866e 260 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 25 259 38.171 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AL543_09085 1f5af0a4de8ac973df7ff7c9abbb866e 260 Gene3D G3DSA:3.40.50.150 40 260 2.0E-74 T 11-10-2018 AL543_09085 1f5af0a4de8ac973df7ff7c9abbb866e 260 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 167 181 - T 11-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 AL543_09085 1f5af0a4de8ac973df7ff7c9abbb866e 260 Pfam PF01209 ubiE/COQ5 methyltransferase family 29 259 8.4E-103 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AL543_09085 1f5af0a4de8ac973df7ff7c9abbb866e 260 SUPERFAMILY SSF53335 28 258 2.48E-51 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL543_09085 1f5af0a4de8ac973df7ff7c9abbb866e 260 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 45 60 - T 11-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 AL543_09085 1f5af0a4de8ac973df7ff7c9abbb866e 260 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 34 259 3.6E-83 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AL543_06865 1258721117500359b9d155119b1474fa 256 Pfam PF07729 FCD domain 99 226 1.5E-20 T 11-10-2018 IPR011711 GntR, C-terminal AL543_06865 1258721117500359b9d155119b1474fa 256 SUPERFAMILY SSF48008 97 235 4.71E-21 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL543_06865 1258721117500359b9d155119b1474fa 256 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 3.5E-25 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL543_06865 1258721117500359b9d155119b1474fa 256 Gene3D G3DSA:1.10.10.10 1 74 4.5E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_06865 1258721117500359b9d155119b1474fa 256 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 2.8E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL543_06865 1258721117500359b9d155119b1474fa 256 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 2.8E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL543_06865 1258721117500359b9d155119b1474fa 256 SUPERFAMILY SSF46785 5 77 5.73E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_06865 1258721117500359b9d155119b1474fa 256 SMART SM00895 99 227 2.2E-20 T 11-10-2018 IPR011711 GntR, C-terminal AL543_06865 1258721117500359b9d155119b1474fa 256 Gene3D G3DSA:1.20.120.530 97 236 1.6E-29 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL543_06865 1258721117500359b9d155119b1474fa 256 SMART SM00345 15 74 2.8E-27 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL543_12170 15bdcc2bda1cc83d4e42ed47f38cabb8 801 SMART SM01068 1 63 9.9E-19 T 11-10-2018 IPR009342 Putative carbohydrate binding domain AL543_12170 15bdcc2bda1cc83d4e42ed47f38cabb8 801 Gene3D G3DSA:2.60.420.10 723 801 5.3E-31 T 11-10-2018 AL543_12170 15bdcc2bda1cc83d4e42ed47f38cabb8 801 SUPERFAMILY SSF48208 273 800 1.96E-110 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AL543_12170 15bdcc2bda1cc83d4e42ed47f38cabb8 801 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 296 727 1.1E-211 T 11-10-2018 IPR033432 Glycosyl hydrolase 36, catalytic domain AL543_12170 15bdcc2bda1cc83d4e42ed47f38cabb8 801 SUPERFAMILY SSF74650 1 269 7.53E-80 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 AL543_12170 15bdcc2bda1cc83d4e42ed47f38cabb8 801 Gene3D G3DSA:2.70.98.40 1 302 2.2E-114 T 11-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily AL543_12170 15bdcc2bda1cc83d4e42ed47f38cabb8 801 Pfam PF06165 Glycosyltransferase family 36 21 267 1.9E-84 T 11-10-2018 IPR010383 Glycosyl hydrolase 94 AL543_12170 15bdcc2bda1cc83d4e42ed47f38cabb8 801 Gene3D G3DSA:1.50.10.10 311 722 4.1E-131 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 AL543_17385 a84e1232601cdd7f2305eca3ff6e6ded 961 SUPERFAMILY SSF53383 42 464 7.34E-113 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL543_17385 a84e1232601cdd7f2305eca3ff6e6ded 961 Gene3D G3DSA:1.20.1650.10 463 561 2.3E-45 T 11-10-2018 AL543_17385 a84e1232601cdd7f2305eca3ff6e6ded 961 Gene3D G3DSA:3.90.1150.10 562 950 2.5E-133 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL543_17385 a84e1232601cdd7f2305eca3ff6e6ded 961 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 780 801 - T 11-10-2018 IPR021115 Pyridoxal-phosphate binding site GO:0016831 AL543_17385 a84e1232601cdd7f2305eca3ff6e6ded 961 SUPERFAMILY SSF53383 516 959 3.13E-111 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL543_17385 a84e1232601cdd7f2305eca3ff6e6ded 961 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 533 893 4.2E-65 T 11-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 AL543_17385 a84e1232601cdd7f2305eca3ff6e6ded 961 Gene3D G3DSA:3.40.640.10 87 355 1.3E-129 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL543_17385 a84e1232601cdd7f2305eca3ff6e6ded 961 Pfam PF00202 Aminotransferase class-III 50 464 4.2E-92 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL543_17385 a84e1232601cdd7f2305eca3ff6e6ded 961 Gene3D G3DSA:3.90.1150.10 39 462 1.3E-129 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL543_17385 a84e1232601cdd7f2305eca3ff6e6ded 961 Gene3D G3DSA:3.40.640.10 576 844 2.5E-133 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL543_17385 a84e1232601cdd7f2305eca3ff6e6ded 961 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 34 465 2.3E-156 T 11-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 AL543_06680 1c0b76004705327b36179a572365dc45 489 SUPERFAMILY SSF51971 389 474 6.36E-8 T 11-10-2018 AL543_06680 1c0b76004705327b36179a572365dc45 489 Gene3D G3DSA:1.10.1060.10 8 143 1.7E-24 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL543_06680 1c0b76004705327b36179a572365dc45 489 SUPERFAMILY SSF46548 2 155 1.99E-36 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL543_06680 1c0b76004705327b36179a572365dc45 489 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 37 131 2.1E-24 T 11-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 AL543_06680 1c0b76004705327b36179a572365dc45 489 Gene3D G3DSA:3.40.50.720 144 251 1.6E-15 T 11-10-2018 AL543_06680 1c0b76004705327b36179a572365dc45 489 SUPERFAMILY SSF51971 143 407 2.88E-65 T 11-10-2018 AL543_06680 1c0b76004705327b36179a572365dc45 489 Gene3D G3DSA:3.50.50.60 252 406 9.3E-37 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_06680 1c0b76004705327b36179a572365dc45 489 PRINTS PR00419 Adrenodoxin reductase family signature 146 168 2.2E-23 T 11-10-2018 AL543_06680 1c0b76004705327b36179a572365dc45 489 PRINTS PR00419 Adrenodoxin reductase family signature 169 182 2.2E-23 T 11-10-2018 AL543_06680 1c0b76004705327b36179a572365dc45 489 PRINTS PR00419 Adrenodoxin reductase family signature 211 221 2.2E-23 T 11-10-2018 AL543_06680 1c0b76004705327b36179a572365dc45 489 PRINTS PR00419 Adrenodoxin reductase family signature 286 300 2.2E-23 T 11-10-2018 AL543_06680 1c0b76004705327b36179a572365dc45 489 Gene3D G3DSA:3.50.50.60 412 474 1.0E-5 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_06680 1c0b76004705327b36179a572365dc45 489 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 146 459 7.4E-27 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL543_06680 1c0b76004705327b36179a572365dc45 489 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 478 3.8E-199 T 11-10-2018 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 AL543_19995 337a4f6adef725068e6653f7cf5aebbc 666 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 430 655 3.3E-54 T 11-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 AL543_19995 337a4f6adef725068e6653f7cf5aebbc 666 Pfam PF07196 Flagellin hook IN motif 125 178 2.9E-8 T 11-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 AL543_19995 337a4f6adef725068e6653f7cf5aebbc 666 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 10 107 1.7E-21 T 11-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 AL543_08220 47428735425ca66e96c5a68fb51c7cd4 183 SUPERFAMILY SSF56235 2 172 2.04E-57 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL543_08220 47428735425ca66e96c5a68fb51c7cd4 183 Pfam PF00227 Proteasome subunit 2 170 2.1E-23 T 11-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 AL543_08220 47428735425ca66e96c5a68fb51c7cd4 183 Gene3D G3DSA:3.60.20.10 1 173 1.2E-67 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL543_08220 47428735425ca66e96c5a68fb51c7cd4 183 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 42.08 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AL543_08220 47428735425ca66e96c5a68fb51c7cd4 183 PIRSF PIRSF039093 1 175 5.5E-87 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AL543_08220 47428735425ca66e96c5a68fb51c7cd4 183 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 8.5E-87 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AL543_00695 20c1f41f6d622b806b4e29ca2214148a 339 Gene3D G3DSA:3.30.70.270 166 337 5.5E-48 T 11-10-2018 AL543_00695 20c1f41f6d622b806b4e29ca2214148a 339 SMART SM00267 169 339 1.4E-51 T 11-10-2018 IPR000160 GGDEF domain AL543_00695 20c1f41f6d622b806b4e29ca2214148a 339 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 177 336 1.9E-39 T 11-10-2018 IPR000160 GGDEF domain AL543_00695 20c1f41f6d622b806b4e29ca2214148a 339 SUPERFAMILY SSF55073 185 337 5.02E-42 T 11-10-2018 IPR029787 Nucleotide cyclase AL543_00695 20c1f41f6d622b806b4e29ca2214148a 339 Pfam PF00990 Diguanylate cyclase, GGDEF domain 180 335 4.3E-38 T 11-10-2018 IPR000160 GGDEF domain AL543_02210 78dd0d6d0ae0e781542e9c196378a0a9 244 Pfam PF04973 Nicotinamide mononucleotide transporter 25 227 1.0E-52 T 11-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 AL543_02210 78dd0d6d0ae0e781542e9c196378a0a9 244 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 25 231 1.8E-56 T 11-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 AL543_18760 029b80fad835e015f55940ad40973968 127 Gene3D G3DSA:1.20.120.160 6 116 5.5E-17 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AL543_18760 029b80fad835e015f55940ad40973968 127 SUPERFAMILY SSF47226 10 121 1.7E-17 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AL543_18760 029b80fad835e015f55940ad40973968 127 Pfam PF01627 Hpt domain 34 94 1.1E-7 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AL543_03050 7a79567d042381c90db9c75fdde974df 672 Gene3D G3DSA:2.40.50.640 83 157 6.0E-31 T 11-10-2018 AL543_03050 7a79567d042381c90db9c75fdde974df 672 SUPERFAMILY SSF50249 568 649 4.23E-18 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL543_03050 7a79567d042381c90db9c75fdde974df 672 Hamap MF_01036 Exoribonuclease 2 [rnb]. 1 650 42.075 T 11-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 AL543_03050 7a79567d042381c90db9c75fdde974df 672 Pfam PF00575 S1 RNA binding domain 564 646 3.7E-7 T 11-10-2018 IPR003029 S1 domain GO:0003676 AL543_03050 7a79567d042381c90db9c75fdde974df 672 SUPERFAMILY SSF50249 9 80 1.26E-13 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL543_03050 7a79567d042381c90db9c75fdde974df 672 Gene3D G3DSA:2.40.50.140 1 82 3.2E-26 T 11-10-2018 AL543_03050 7a79567d042381c90db9c75fdde974df 672 Gene3D G3DSA:2.40.50.140 565 651 7.4E-35 T 11-10-2018 AL543_03050 7a79567d042381c90db9c75fdde974df 672 SMART SM00357 23 79 1.6E-9 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 AL543_03050 7a79567d042381c90db9c75fdde974df 672 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 6 648 2.1E-185 T 11-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 AL543_03050 7a79567d042381c90db9c75fdde974df 672 SMART SM00955 193 523 2.9E-113 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 AL543_03050 7a79567d042381c90db9c75fdde974df 672 Pfam PF08206 Ribonuclease B OB domain 24 80 5.9E-16 T 11-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain AL543_03050 7a79567d042381c90db9c75fdde974df 672 SUPERFAMILY SSF50249 83 173 8.57E-26 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL543_03050 7a79567d042381c90db9c75fdde974df 672 ProSitePatterns PS01175 Ribonuclease II family signature. 490 514 - T 11-10-2018 IPR022966 Ribonuclease II/R, conserved site AL543_03050 7a79567d042381c90db9c75fdde974df 672 Pfam PF00773 RNB domain 193 521 8.5E-84 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 AL543_03050 7a79567d042381c90db9c75fdde974df 672 SUPERFAMILY SSF50249 192 563 1.37E-106 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL543_03050 7a79567d042381c90db9c75fdde974df 672 TIGRFAM TIGR02062 RNase_B: exoribonuclease II 1 649 0.0 T 11-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 AL543_05740 cb3c57c2ffa8d6a56718f49ec412decc 399 Pfam PF04055 Radical SAM superfamily 24 184 1.0E-11 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL543_05740 cb3c57c2ffa8d6a56718f49ec412decc 399 SUPERFAMILY SSF102114 14 344 2.22E-43 T 11-10-2018 AL543_05740 cb3c57c2ffa8d6a56718f49ec412decc 399 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 18 383 4.5E-145 T 11-10-2018 AL543_05740 cb3c57c2ffa8d6a56718f49ec412decc 399 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 274 357 1.3E-16 T 11-10-2018 IPR023885 4Fe4S-binding SPASM domain AL543_05740 cb3c57c2ffa8d6a56718f49ec412decc 399 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 178 398 1.0E-8 T 11-10-2018 AL543_05740 cb3c57c2ffa8d6a56718f49ec412decc 399 Pfam PF13186 Iron-sulfur cluster-binding domain 274 335 1.0E-6 T 11-10-2018 IPR023885 4Fe4S-binding SPASM domain AL543_05740 cb3c57c2ffa8d6a56718f49ec412decc 399 Gene3D G3DSA:3.20.20.70 15 385 1.2E-112 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_11975 1ec6d542d117b9d2d9692c2fd593c4d6 147 PIRSF PIRSF006318 1 136 2.8E-52 T 11-10-2018 IPR009386 Protein of unknown function DUF1043 AL543_11975 1ec6d542d117b9d2d9692c2fd593c4d6 147 Pfam PF06295 Protein of unknown function (DUF1043) 6 129 6.0E-45 T 11-10-2018 IPR009386 Protein of unknown function DUF1043 AL543_09635 4077db5ba5c38c8a5df94f50afc1589a 82 Gene3D G3DSA:3.30.110.40 4 80 1.1E-28 T 11-10-2018 IPR036868 TusA-like domain superfamily AL543_09635 4077db5ba5c38c8a5df94f50afc1589a 82 Pfam PF01206 Sulfurtransferase TusA 10 79 1.1E-22 T 11-10-2018 IPR001455 TusA-like domain AL543_09635 4077db5ba5c38c8a5df94f50afc1589a 82 SUPERFAMILY SSF64307 8 80 1.1E-24 T 11-10-2018 IPR036868 TusA-like domain superfamily AL543_09635 4077db5ba5c38c8a5df94f50afc1589a 82 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 11-10-2018 IPR001455 TusA-like domain AL543_09635 4077db5ba5c38c8a5df94f50afc1589a 82 Hamap MF_00413 Sulfur carrier protein TusA [tusA]. 3 81 28.356 T 11-10-2018 IPR022931 Sulfur carrier protein TusA GO:0002143|GO:0097163 AL543_17135 d5b57ae230eee9b911e4d1d3a5a9dd61 420 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 230 249 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AL543_17135 d5b57ae230eee9b911e4d1d3a5a9dd61 420 PIRSF PIRSF005572 285 420 8.4E-5 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 AL543_17135 d5b57ae230eee9b911e4d1d3a5a9dd61 420 PIRSF PIRSF005572 32 268 2.6E-46 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 AL543_17135 d5b57ae230eee9b911e4d1d3a5a9dd61 420 Gene3D G3DSA:3.40.640.10 46 310 9.6E-153 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL543_17135 d5b57ae230eee9b911e4d1d3a5a9dd61 420 Pfam PF00266 Aminotransferase class-V 35 408 2.9E-139 T 11-10-2018 IPR000192 Aminotransferase class V domain AL543_17135 d5b57ae230eee9b911e4d1d3a5a9dd61 420 Gene3D G3DSA:3.90.1150.10 19 412 9.6E-153 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL543_17135 d5b57ae230eee9b911e4d1d3a5a9dd61 420 SUPERFAMILY SSF53383 17 415 2.55E-117 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL543_17135 d5b57ae230eee9b911e4d1d3a5a9dd61 420 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 19 418 1.5E-163 T 11-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 AL543_20040 cb2712ae85bc070245009834cf668931 115 SUPERFAMILY SSF52833 2 114 3.58E-35 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL543_20040 cb2712ae85bc070245009834cf668931 115 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 112 8.5E-33 T 11-10-2018 IPR006504 Transcriptional regulator Spx/MgsR AL543_20040 cb2712ae85bc070245009834cf668931 115 Pfam PF03960 ArsC family 6 112 3.4E-18 T 11-10-2018 IPR006660 Arsenate reductase-like AL543_20040 cb2712ae85bc070245009834cf668931 115 Gene3D G3DSA:3.40.30.10 2 115 1.1E-42 T 11-10-2018 AL543_04725 732c42818732c3bcfe7cf0452204621e 393 Gene3D G3DSA:3.90.1150.10 11 389 6.6E-140 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL543_04725 732c42818732c3bcfe7cf0452204621e 393 SUPERFAMILY SSF53383 1 392 3.13E-99 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL543_04725 732c42818732c3bcfe7cf0452204621e 393 PRINTS PR00799 Aspartate aminotransferase signature 270 295 6.0E-29 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AL543_04725 732c42818732c3bcfe7cf0452204621e 393 PRINTS PR00799 Aspartate aminotransferase signature 338 356 6.0E-29 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AL543_04725 732c42818732c3bcfe7cf0452204621e 393 PRINTS PR00799 Aspartate aminotransferase signature 172 191 6.0E-29 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AL543_04725 732c42818732c3bcfe7cf0452204621e 393 PRINTS PR00799 Aspartate aminotransferase signature 203 215 6.0E-29 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AL543_04725 732c42818732c3bcfe7cf0452204621e 393 Gene3D G3DSA:3.40.640.10 45 312 6.6E-140 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL543_04725 732c42818732c3bcfe7cf0452204621e 393 Pfam PF00155 Aminotransferase class I and II 27 389 1.4E-66 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL543_06520 0ecf3258f92dbba9f3ea5849bd0637ef 695 SUPERFAMILY SSF50447 261 399 2.43E-32 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AL543_06520 0ecf3258f92dbba9f3ea5849bd0637ef 695 Pfam PF03144 Elongation factor Tu domain 2 321 388 4.1E-17 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AL543_06520 0ecf3258f92dbba9f3ea5849bd0637ef 695 Pfam PF14492 Elongation Factor G, domain II 401 474 8.5E-29 T 11-10-2018 AL543_06520 0ecf3258f92dbba9f3ea5849bd0637ef 695 SUPERFAMILY SSF54980 600 689 2.23E-29 T 11-10-2018 IPR035647 EF-G domain III/V-like AL543_06520 0ecf3258f92dbba9f3ea5849bd0637ef 695 SMART SM00838 597 684 8.6E-47 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like AL543_06520 0ecf3258f92dbba9f3ea5849bd0637ef 695 TIGRFAM TIGR00484 EF-G: translation elongation factor G 3 689 9.3E-296 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL543_06520 0ecf3258f92dbba9f3ea5849bd0637ef 695 SUPERFAMILY SSF54980 401 478 1.8E-20 T 11-10-2018 IPR035647 EF-G domain III/V-like AL543_06520 0ecf3258f92dbba9f3ea5849bd0637ef 695 PRINTS PR00315 GTP-binding elongation factor signature 9 22 1.2E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL543_06520 0ecf3258f92dbba9f3ea5849bd0637ef 695 PRINTS PR00315 GTP-binding elongation factor signature 75 85 1.2E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL543_06520 0ecf3258f92dbba9f3ea5849bd0637ef 695 PRINTS PR00315 GTP-binding elongation factor signature 55 63 1.2E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL543_06520 0ecf3258f92dbba9f3ea5849bd0637ef 695 PRINTS PR00315 GTP-binding elongation factor signature 127 136 1.2E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL543_06520 0ecf3258f92dbba9f3ea5849bd0637ef 695 SUPERFAMILY SSF54211 476 596 7.08E-40 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL543_06520 0ecf3258f92dbba9f3ea5849bd0637ef 695 Pfam PF03764 Elongation factor G, domain IV 476 594 3.5E-44 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AL543_06520 0ecf3258f92dbba9f3ea5849bd0637ef 695 Hamap MF_00054_B Elongation factor G [fusA]. 3 688 102.91 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL543_06520 0ecf3258f92dbba9f3ea5849bd0637ef 695 SMART SM00889 477 595 2.9E-60 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AL543_06520 0ecf3258f92dbba9f3ea5849bd0637ef 695 Gene3D G3DSA:3.30.230.10 481 684 1.9E-84 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL543_06520 0ecf3258f92dbba9f3ea5849bd0637ef 695 Gene3D G3DSA:3.30.70.870 430 480 2.0E-20 T 11-10-2018 AL543_06520 0ecf3258f92dbba9f3ea5849bd0637ef 695 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site AL543_06520 0ecf3258f92dbba9f3ea5849bd0637ef 695 SUPERFAMILY SSF52540 4 278 3.91E-99 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_06520 0ecf3258f92dbba9f3ea5849bd0637ef 695 Gene3D G3DSA:3.30.70.240 601 671 1.9E-84 T 11-10-2018 AL543_06520 0ecf3258f92dbba9f3ea5849bd0637ef 695 Gene3D G3DSA:2.40.30.10 294 413 1.8E-42 T 11-10-2018 AL543_06520 0ecf3258f92dbba9f3ea5849bd0637ef 695 Pfam PF00679 Elongation factor G C-terminus 597 683 1.4E-28 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like AL543_06520 0ecf3258f92dbba9f3ea5849bd0637ef 695 Pfam PF00009 Elongation factor Tu GTP binding domain 7 278 4.2E-59 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL543_06520 0ecf3258f92dbba9f3ea5849bd0637ef 695 Gene3D G3DSA:3.40.50.300 2 289 1.6E-100 T 11-10-2018 AL543_06520 0ecf3258f92dbba9f3ea5849bd0637ef 695 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 175 4.1E-25 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL543_14060 2312621bef92d4c3448b6bea104ab948 635 SUPERFAMILY SSF54211 238 493 9.86E-100 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL543_14060 2312621bef92d4c3448b6bea104ab948 635 Gene3D G3DSA:3.30.230.80 237 404 2.1E-70 T 11-10-2018 AL543_14060 2312621bef92d4c3448b6bea104ab948 635 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 188 3.8E-14 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_14060 2312621bef92d4c3448b6bea104ab948 635 Pfam PF00183 Hsp90 protein 227 631 3.3E-129 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 AL543_14060 2312621bef92d4c3448b6bea104ab948 635 SUPERFAMILY SSF110942 520 632 3.92E-34 T 11-10-2018 IPR037196 HSP90, C-terminal domain AL543_14060 2312621bef92d4c3448b6bea104ab948 635 SUPERFAMILY SSF55874 10 218 2.36E-65 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_14060 2312621bef92d4c3448b6bea104ab948 635 PRINTS PR00775 90kDa heat shock protein signature 98 115 1.4E-63 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AL543_14060 2312621bef92d4c3448b6bea104ab948 635 PRINTS PR00775 90kDa heat shock protein signature 195 213 1.4E-63 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AL543_14060 2312621bef92d4c3448b6bea104ab948 635 PRINTS PR00775 90kDa heat shock protein signature 125 147 1.4E-63 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AL543_14060 2312621bef92d4c3448b6bea104ab948 635 PRINTS PR00775 90kDa heat shock protein signature 31 53 1.4E-63 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AL543_14060 2312621bef92d4c3448b6bea104ab948 635 PRINTS PR00775 90kDa heat shock protein signature 177 194 1.4E-63 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AL543_14060 2312621bef92d4c3448b6bea104ab948 635 PRINTS PR00775 90kDa heat shock protein signature 10 30 1.4E-63 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AL543_14060 2312621bef92d4c3448b6bea104ab948 635 PRINTS PR00775 90kDa heat shock protein signature 80 97 1.4E-63 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AL543_14060 2312621bef92d4c3448b6bea104ab948 635 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 30 39 - T 11-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 AL543_14060 2312621bef92d4c3448b6bea104ab948 635 PIRSF PIRSF002583 1 634 1.7E-217 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 AL543_14060 2312621bef92d4c3448b6bea104ab948 635 Gene3D G3DSA:1.20.120.790 500 632 3.9E-42 T 11-10-2018 IPR037196 HSP90, C-terminal domain AL543_14060 2312621bef92d4c3448b6bea104ab948 635 Hamap MF_00505 Chaperone protein HtpG [htpG]. 7 632 32.476 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 AL543_14060 2312621bef92d4c3448b6bea104ab948 635 Gene3D G3DSA:3.40.50.11260 405 494 2.5E-35 T 11-10-2018 AL543_14060 2312621bef92d4c3448b6bea104ab948 635 SMART SM00387 32 189 2.1E-9 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_14060 2312621bef92d4c3448b6bea104ab948 635 Gene3D G3DSA:3.30.565.10 6 219 6.4E-77 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_18700 ff041f926938dbce1f469470e3ae8c14 273 Gene3D G3DSA:3.40.50.300 1 273 6.1E-87 T 11-10-2018 AL543_18700 ff041f926938dbce1f469470e3ae8c14 273 SUPERFAMILY SSF52540 4 253 8.1E-74 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_18700 ff041f926938dbce1f469470e3ae8c14 273 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_18700 ff041f926938dbce1f469470e3ae8c14 273 SMART SM00382 39 239 2.7E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_18700 ff041f926938dbce1f469470e3ae8c14 273 Pfam PF00005 ABC transporter 31 180 2.5E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_19790 59a71eb0f81e11adea466f7d151b9b9e 178 SUPERFAMILY SSF82808 64 177 8.5E-49 T 11-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 AL543_19790 59a71eb0f81e11adea466f7d151b9b9e 178 Gene3D G3DSA:1.10.1220.10 1 39 1.6E-23 T 11-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AL543_19790 59a71eb0f81e11adea466f7d151b9b9e 178 PIRSF PIRSF019401 49 178 6.2E-36 T 11-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 AL543_19790 59a71eb0f81e11adea466f7d151b9b9e 178 PIRSF PIRSF019401 1 63 3.8E-17 T 11-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 AL543_19790 59a71eb0f81e11adea466f7d151b9b9e 178 Pfam PF17206 SeqA protein N-terminal domain 1 36 3.3E-23 T 11-10-2018 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal AL543_19790 59a71eb0f81e11adea466f7d151b9b9e 178 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 178 40.665 T 11-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 AL543_19790 59a71eb0f81e11adea466f7d151b9b9e 178 Pfam PF03925 SeqA protein C-terminal domain 69 176 1.9E-45 T 11-10-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 AL543_19790 59a71eb0f81e11adea466f7d151b9b9e 178 SUPERFAMILY SSF47598 1 34 4.22E-13 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 AL543_19790 59a71eb0f81e11adea466f7d151b9b9e 178 Gene3D G3DSA:1.20.1380.10 63 178 3.6E-48 T 11-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 AL543_18145 9a570cb9ffb94df5f1d8f0232e50ddf9 861 Gene3D G3DSA:2.60.40.1180 662 812 4.9E-29 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta AL543_18145 9a570cb9ffb94df5f1d8f0232e50ddf9 861 SUPERFAMILY SSF74650 43 293 1.66E-26 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 AL543_18145 9a570cb9ffb94df5f1d8f0232e50ddf9 861 Gene3D G3DSA:3.20.20.80 397 603 1.5E-47 T 11-10-2018 AL543_18145 9a570cb9ffb94df5f1d8f0232e50ddf9 861 Gene3D G3DSA:2.60.40.1180 605 661 2.5E-10 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta AL543_18145 9a570cb9ffb94df5f1d8f0232e50ddf9 861 Pfam PF01055 Glycosyl hydrolases family 31 422 665 2.2E-55 T 11-10-2018 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 AL543_18145 9a570cb9ffb94df5f1d8f0232e50ddf9 861 Pfam PF16338 Domain of unknown function (DUF4968) 52 150 1.6E-7 T 11-10-2018 IPR032513 Alpha-glucosidase, domain of unknown function DUF4968 AL543_18145 9a570cb9ffb94df5f1d8f0232e50ddf9 861 SUPERFAMILY SSF51445 296 569 8.43E-27 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AL543_18145 9a570cb9ffb94df5f1d8f0232e50ddf9 861 SUPERFAMILY SSF51011 571 660 1.44E-14 T 11-10-2018 AL543_18145 9a570cb9ffb94df5f1d8f0232e50ddf9 861 Pfam PF17137 Domain of unknown function (DUF5110) 682 757 5.5E-16 T 11-10-2018 IPR033403 Domain of unknown function DUF5110 AL543_18145 9a570cb9ffb94df5f1d8f0232e50ddf9 861 Gene3D G3DSA:2.60.40.1760 45 306 5.4E-43 T 11-10-2018 AL543_13520 ec9fb289d9b0a27314ca320fd14c4d87 41 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 16.38 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_13520 ec9fb289d9b0a27314ca320fd14c4d87 41 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 6.8E-8 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_13520 ec9fb289d9b0a27314ca320fd14c4d87 41 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_13520 ec9fb289d9b0a27314ca320fd14c4d87 41 SUPERFAMILY SSF57840 1 40 1.44E-13 T 11-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_13520 ec9fb289d9b0a27314ca320fd14c4d87 41 Pfam PF00444 Ribosomal protein L36 1 40 6.8E-17 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_13415 2b36766209544905afd65ec9cedc4a19 200 Gene3D G3DSA:2.30.22.10 144 200 1.4E-25 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 AL543_13415 2b36766209544905afd65ec9cedc4a19 200 Hamap MF_01151 Protein GrpE [grpE]. 2 200 22.252 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AL543_13415 2b36766209544905afd65ec9cedc4a19 200 PRINTS PR00773 GrpE protein signature 97 112 6.9E-29 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AL543_13415 2b36766209544905afd65ec9cedc4a19 200 PRINTS PR00773 GrpE protein signature 69 85 6.9E-29 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AL543_13415 2b36766209544905afd65ec9cedc4a19 200 PRINTS PR00773 GrpE protein signature 152 167 6.9E-29 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AL543_13415 2b36766209544905afd65ec9cedc4a19 200 PRINTS PR00773 GrpE protein signature 179 198 6.9E-29 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AL543_13415 2b36766209544905afd65ec9cedc4a19 200 SUPERFAMILY SSF58014 46 144 3.53E-28 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 AL543_13415 2b36766209544905afd65ec9cedc4a19 200 ProSitePatterns PS01071 grpE protein signature. 155 198 - T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AL543_13415 2b36766209544905afd65ec9cedc4a19 200 SUPERFAMILY SSF51064 145 200 2.35E-19 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 AL543_13415 2b36766209544905afd65ec9cedc4a19 200 Gene3D G3DSA:3.90.20.20 37 143 6.0E-32 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 AL543_13415 2b36766209544905afd65ec9cedc4a19 200 Pfam PF01025 GrpE 39 200 1.6E-54 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AL543_09960 097d073eb53defa2c869e6d93ba900f4 107 SMART SM00530 10 69 3.0E-13 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL543_09960 097d073eb53defa2c869e6d93ba900f4 107 SUPERFAMILY SSF47413 7 75 4.22E-14 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL543_09960 097d073eb53defa2c869e6d93ba900f4 107 Gene3D G3DSA:1.10.260.40 7 105 6.3E-24 T 11-10-2018 AL543_09960 097d073eb53defa2c869e6d93ba900f4 107 Pfam PF01381 Helix-turn-helix 11 69 1.5E-10 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL543_00730 056edeff2af0dc0712bc8394f68770fc 304 Pfam PF03466 LysR substrate binding domain 92 293 8.1E-27 T 11-10-2018 IPR005119 LysR, substrate-binding AL543_00730 056edeff2af0dc0712bc8394f68770fc 304 SUPERFAMILY SSF46785 4 83 1.68E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_00730 056edeff2af0dc0712bc8394f68770fc 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.1E-20 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_00730 056edeff2af0dc0712bc8394f68770fc 304 Gene3D G3DSA:3.40.190.10 102 289 7.4E-37 T 11-10-2018 AL543_00730 056edeff2af0dc0712bc8394f68770fc 304 Gene3D G3DSA:3.40.190.10 163 262 7.4E-37 T 11-10-2018 AL543_00730 056edeff2af0dc0712bc8394f68770fc 304 SUPERFAMILY SSF53850 92 296 3.26E-28 T 11-10-2018 AL543_00730 056edeff2af0dc0712bc8394f68770fc 304 Gene3D G3DSA:1.10.10.10 5 88 3.1E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_00730 056edeff2af0dc0712bc8394f68770fc 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 8.3E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_00730 056edeff2af0dc0712bc8394f68770fc 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 8.3E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_00730 056edeff2af0dc0712bc8394f68770fc 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 8.3E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_02885 478ff88ffb650d1c01307b11912c35d6 281 Gene3D G3DSA:1.10.10.10 1 82 9.0E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_02885 478ff88ffb650d1c01307b11912c35d6 281 Pfam PF01418 Helix-turn-helix domain, rpiR family 4 74 1.1E-13 T 11-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AL543_02885 478ff88ffb650d1c01307b11912c35d6 281 SUPERFAMILY SSF46689 3 76 5.55E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_02885 478ff88ffb650d1c01307b11912c35d6 281 Pfam PF01380 SIS domain 130 257 2.7E-18 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL543_02885 478ff88ffb650d1c01307b11912c35d6 281 Gene3D G3DSA:3.40.50.10490 95 272 2.1E-36 T 11-10-2018 AL543_02885 478ff88ffb650d1c01307b11912c35d6 281 SUPERFAMILY SSF53697 95 263 1.57E-34 T 11-10-2018 AL543_03635 215ce34130e579a4bf38d4ad0ea32ba9 591 SUPERFAMILY SSF53474 228 527 1.42E-34 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL543_03635 215ce34130e579a4bf38d4ad0ea32ba9 591 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 95 266 1.3E-73 T 11-10-2018 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 AL543_03635 215ce34130e579a4bf38d4ad0ea32ba9 591 Gene3D G3DSA:3.40.50.1820 226 405 3.4E-8 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL543_03635 215ce34130e579a4bf38d4ad0ea32ba9 591 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 55 584 6.7E-261 T 11-10-2018 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 AL543_09805 db2f639732aa751d2cefd51bbf7f153b 184 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 130 1.2E-6 T 11-10-2018 IPR001451 Hexapeptide repeat AL543_09805 db2f639732aa751d2cefd51bbf7f153b 184 SUPERFAMILY SSF51161 4 176 1.33E-42 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AL543_09805 db2f639732aa751d2cefd51bbf7f153b 184 Gene3D G3DSA:2.160.10.10 1 184 1.4E-52 T 11-10-2018 AL543_07575 67b305b7b5460497179691808358f23d 451 Pfam PF08245 Mur ligase middle domain 108 291 1.7E-22 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AL543_07575 67b305b7b5460497179691808358f23d 451 SUPERFAMILY SSF53623 96 306 2.88E-52 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL543_07575 67b305b7b5460497179691808358f23d 451 SUPERFAMILY SSF51984 1 89 5.89E-24 T 11-10-2018 AL543_07575 67b305b7b5460497179691808358f23d 451 Pfam PF01225 Mur ligase family, catalytic domain 2 101 1.8E-20 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AL543_07575 67b305b7b5460497179691808358f23d 451 Gene3D G3DSA:3.90.190.20 314 450 1.3E-30 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL543_07575 67b305b7b5460497179691808358f23d 451 Gene3D G3DSA:3.40.1190.10 91 313 5.2E-57 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL543_07575 67b305b7b5460497179691808358f23d 451 Pfam PF02875 Mur ligase family, glutamate ligase domain 311 361 3.6E-10 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 AL543_07575 67b305b7b5460497179691808358f23d 451 Gene3D G3DSA:3.40.50.720 1 90 1.1E-36 T 11-10-2018 AL543_07575 67b305b7b5460497179691808358f23d 451 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 449 58.717 T 11-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 AL543_07575 67b305b7b5460497179691808358f23d 451 SUPERFAMILY SSF53244 311 448 1.13E-36 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL543_07575 67b305b7b5460497179691808358f23d 451 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 449 1.3E-271 T 11-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 AL543_08435 8b2fb1cdcaec790a74996c1e2ab0c5d4 268 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 18 267 45.392 T 11-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 AL543_08435 8b2fb1cdcaec790a74996c1e2ab0c5d4 268 Pfam PF00561 alpha/beta hydrolase fold 29 254 7.3E-22 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AL543_08435 8b2fb1cdcaec790a74996c1e2ab0c5d4 268 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 24 266 3.1E-119 T 11-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 AL543_08435 8b2fb1cdcaec790a74996c1e2ab0c5d4 268 Gene3D G3DSA:3.40.50.1820 13 267 3.4E-67 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL543_08435 8b2fb1cdcaec790a74996c1e2ab0c5d4 268 SUPERFAMILY SSF53474 18 265 1.8E-49 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL543_19080 0f0405ca4107a973733472fd0c67fc53 87 SUPERFAMILY SSF55229 33 85 1.7E-16 T 11-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 AL543_19080 0f0405ca4107a973733472fd0c67fc53 87 Gene3D G3DSA:3.30.1070.10 1 84 1.8E-26 T 11-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 AL543_19080 0f0405ca4107a973733472fd0c67fc53 87 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 84 1.6E-34 T 11-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 AL543_19080 0f0405ca4107a973733472fd0c67fc53 87 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 87 18.884 T 11-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 AL543_19080 0f0405ca4107a973733472fd0c67fc53 87 Pfam PF03776 Septum formation topological specificity factor MinE 14 83 1.5E-23 T 11-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 AL543_13335 39fd95072aea45bc4c0bfb53d02a0ffd 347 SUPERFAMILY SSF53098 221 316 4.55E-8 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_13335 39fd95072aea45bc4c0bfb53d02a0ffd 347 Gene3D G3DSA:3.30.420.470 138 344 3.7E-12 T 11-10-2018 AL543_13335 39fd95072aea45bc4c0bfb53d02a0ffd 347 Pfam PF13384 Homeodomain-like domain 28 67 4.3E-7 T 11-10-2018 AL543_13335 39fd95072aea45bc4c0bfb53d02a0ffd 347 Pfam PF13592 Winged helix-turn helix 99 155 3.7E-18 T 11-10-2018 IPR025959 Winged helix-turn helix domain AL543_13335 39fd95072aea45bc4c0bfb53d02a0ffd 347 Pfam PF13358 DDE superfamily endonuclease 169 312 1.5E-34 T 11-10-2018 IPR038717 Tc1-like transposase, DDE domain AL543_13335 39fd95072aea45bc4c0bfb53d02a0ffd 347 SUPERFAMILY SSF46689 16 131 8.96E-24 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_10990 e71ebf4014459e5ad594a564e87adfc8 69 TIGRFAM TIGR02975 phageshock_pspG: phage shock protein G 3 63 2.2E-19 T 11-10-2018 IPR014318 Phage shock protein, PspG AL543_10990 e71ebf4014459e5ad594a564e87adfc8 69 Pfam PF09583 Phage shock protein G (Phageshock_PspG) 1 63 8.3E-21 T 11-10-2018 IPR014318 Phage shock protein, PspG AL543_12905 a94b555a097c7da37bf0b9676a941b02 149 SUPERFAMILY SSF54631 1 132 3.92E-32 T 11-10-2018 AL543_12905 a94b555a097c7da37bf0b9676a941b02 149 Pfam PF00571 CBS domain 79 127 4.6E-8 T 11-10-2018 IPR000644 CBS domain AL543_12905 a94b555a097c7da37bf0b9676a941b02 149 Pfam PF00571 CBS domain 4 58 3.2E-13 T 11-10-2018 IPR000644 CBS domain AL543_12905 a94b555a097c7da37bf0b9676a941b02 149 SMART SM00116 11 59 5.8E-8 T 11-10-2018 IPR000644 CBS domain AL543_12905 a94b555a097c7da37bf0b9676a941b02 149 SMART SM00116 84 131 5.0E-6 T 11-10-2018 IPR000644 CBS domain AL543_12905 a94b555a097c7da37bf0b9676a941b02 149 Gene3D G3DSA:3.10.580.10 1 149 2.0E-58 T 11-10-2018 AL543_02615 bfb20d3e7c20f61a6701512f99e9be96 296 Pfam PF05929 Phage capsid scaffolding protein (GPO) serine peptidase 5 266 6.9E-49 T 11-10-2018 IPR009228 Capsid scaffolding protein GpO GO:0019069 AL543_15495 9c42d1603a94b3a9cdb9bc2c5c2f2471 149 Gene3D G3DSA:2.170.150.20 7 148 1.0E-53 T 11-10-2018 AL543_15495 9c42d1603a94b3a9cdb9bc2c5c2f2471 149 Pfam PF01641 SelR domain 28 143 8.7E-48 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AL543_15495 9c42d1603a94b3a9cdb9bc2c5c2f2471 149 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 24 143 2.0E-51 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AL543_15495 9c42d1603a94b3a9cdb9bc2c5c2f2471 149 SUPERFAMILY SSF51316 23 145 2.09E-52 T 11-10-2018 IPR011057 Mss4-like superfamily AL543_05715 c85a60397747f7c3fab3aa0c2bcfb460 563 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_05715 c85a60397747f7c3fab3aa0c2bcfb460 563 SUPERFAMILY SSF52540 5 263 2.66E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_05715 c85a60397747f7c3fab3aa0c2bcfb460 563 SUPERFAMILY SSF52540 292 547 5.8E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_05715 c85a60397747f7c3fab3aa0c2bcfb460 563 ProSitePatterns PS00211 ABC transporters family signature. 448 462 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_05715 c85a60397747f7c3fab3aa0c2bcfb460 563 Gene3D G3DSA:3.40.50.300 3 305 1.6E-77 T 11-10-2018 AL543_05715 c85a60397747f7c3fab3aa0c2bcfb460 563 SMART SM00382 326 524 1.4E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_05715 c85a60397747f7c3fab3aa0c2bcfb460 563 SMART SM00382 34 241 7.7E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_05715 c85a60397747f7c3fab3aa0c2bcfb460 563 Gene3D G3DSA:3.40.50.300 306 554 7.8E-61 T 11-10-2018 AL543_05715 c85a60397747f7c3fab3aa0c2bcfb460 563 Pfam PF00005 ABC transporter 26 191 5.3E-24 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_05715 c85a60397747f7c3fab3aa0c2bcfb460 563 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 527 554 0.0055 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL543_05715 c85a60397747f7c3fab3aa0c2bcfb460 563 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 281 6.3E-7 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL543_05715 c85a60397747f7c3fab3aa0c2bcfb460 563 Pfam PF00005 ABC transporter 318 476 2.1E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_12255 049e1941930e02fda000588252d3f423 1036 SUPERFAMILY SSF82866 788 1025 5.89E-49 T 11-10-2018 AL543_12255 049e1941930e02fda000588252d3f423 1036 Gene3D G3DSA:1.20.1640.10 510 1018 2.8E-257 T 11-10-2018 AL543_12255 049e1941930e02fda000588252d3f423 1036 Gene3D G3DSA:3.30.70.1440 652 849 2.8E-257 T 11-10-2018 AL543_12255 049e1941930e02fda000588252d3f423 1036 Gene3D G3DSA:3.30.70.1430 41 799 2.8E-257 T 11-10-2018 AL543_12255 049e1941930e02fda000588252d3f423 1036 SUPERFAMILY SSF82714 184 264 1.44E-11 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL543_12255 049e1941930e02fda000588252d3f423 1036 SUPERFAMILY SSF82714 707 788 7.72E-6 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL543_12255 049e1941930e02fda000588252d3f423 1036 Gene3D G3DSA:3.30.70.1320 135 327 2.8E-257 T 11-10-2018 AL543_12255 049e1941930e02fda000588252d3f423 1036 Gene3D G3DSA:1.20.1640.10 12 509 2.8E-257 T 11-10-2018 AL543_12255 049e1941930e02fda000588252d3f423 1036 Pfam PF00873 AcrB/AcrD/AcrF family 6 1021 1.3E-170 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_12255 049e1941930e02fda000588252d3f423 1036 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 8.1E-28 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_12255 049e1941930e02fda000588252d3f423 1036 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 8.1E-28 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_12255 049e1941930e02fda000588252d3f423 1036 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 8.1E-28 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_12255 049e1941930e02fda000588252d3f423 1036 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 8.1E-28 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_12255 049e1941930e02fda000588252d3f423 1036 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 8.1E-28 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_12255 049e1941930e02fda000588252d3f423 1036 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 8.1E-28 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_12255 049e1941930e02fda000588252d3f423 1036 SUPERFAMILY SSF82693 148 325 6.45E-13 T 11-10-2018 AL543_12255 049e1941930e02fda000588252d3f423 1036 Gene3D G3DSA:3.30.2090.10 703 791 2.8E-257 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL543_12255 049e1941930e02fda000588252d3f423 1036 SUPERFAMILY SSF82866 289 491 8.76E-39 T 11-10-2018 AL543_12255 049e1941930e02fda000588252d3f423 1036 SUPERFAMILY SSF82693 41 132 4.19E-22 T 11-10-2018 AL543_12255 049e1941930e02fda000588252d3f423 1036 Gene3D G3DSA:3.30.2090.10 178 268 2.8E-257 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL543_12255 049e1941930e02fda000588252d3f423 1036 Gene3D G3DSA:3.30.70.1430 565 651 2.8E-257 T 11-10-2018 AL543_12160 189cecaefabf05b855fd5018dcfbd964 343 SUPERFAMILY SSF50331 264 342 4.0E-8 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AL543_12160 189cecaefabf05b855fd5018dcfbd964 343 Gene3D G3DSA:3.40.50.300 2 240 1.2E-74 T 11-10-2018 AL543_12160 189cecaefabf05b855fd5018dcfbd964 343 Pfam PF08402 TOBE domain 276 342 1.2E-7 T 11-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 AL543_12160 189cecaefabf05b855fd5018dcfbd964 343 SUPERFAMILY SSF52540 5 242 7.19E-80 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_12160 189cecaefabf05b855fd5018dcfbd964 343 SMART SM00382 29 214 3.2E-19 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_12160 189cecaefabf05b855fd5018dcfbd964 343 Pfam PF00005 ABC transporter 20 164 9.4E-36 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_12160 189cecaefabf05b855fd5018dcfbd964 343 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_03645 fb8cbf215cabfe2ca1d1a49817397508 301 Gene3D G3DSA:1.10.10.10 3 89 2.9E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_03645 fb8cbf215cabfe2ca1d1a49817397508 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 6.5E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_03645 fb8cbf215cabfe2ca1d1a49817397508 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 6.5E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_03645 fb8cbf215cabfe2ca1d1a49817397508 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 6.5E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_03645 fb8cbf215cabfe2ca1d1a49817397508 301 SUPERFAMILY SSF46785 7 110 1.2E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_03645 fb8cbf215cabfe2ca1d1a49817397508 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 67 9.7E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_10680 f077bb7903556d73621a22a9f7d3134b 182 Pfam PF00467 KOW motif 131 162 3.0E-7 T 11-10-2018 IPR005824 KOW AL543_10680 f077bb7903556d73621a22a9f7d3134b 182 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 181 6.4E-71 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AL543_10680 f077bb7903556d73621a22a9f7d3134b 182 Pfam PF02357 Transcription termination factor nusG 7 112 8.8E-27 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AL543_10680 f077bb7903556d73621a22a9f7d3134b 182 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 11-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site AL543_10680 f077bb7903556d73621a22a9f7d3134b 182 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 26.173 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AL543_10680 f077bb7903556d73621a22a9f7d3134b 182 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 6.8E-22 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AL543_10680 f077bb7903556d73621a22a9f7d3134b 182 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 6.8E-22 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AL543_10680 f077bb7903556d73621a22a9f7d3134b 182 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 6.8E-22 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AL543_10680 f077bb7903556d73621a22a9f7d3134b 182 SUPERFAMILY SSF82679 6 116 4.58E-40 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AL543_10680 f077bb7903556d73621a22a9f7d3134b 182 SMART SM00738 6 115 1.0E-50 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AL543_10680 f077bb7903556d73621a22a9f7d3134b 182 Gene3D G3DSA:3.30.70.940 1 122 3.3E-47 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AL543_10680 f077bb7903556d73621a22a9f7d3134b 182 Gene3D G3DSA:2.30.30.30 123 181 3.4E-26 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 AL543_10680 f077bb7903556d73621a22a9f7d3134b 182 SMART SM00739 127 154 3.2E-5 T 11-10-2018 IPR005824 KOW AL543_10680 f077bb7903556d73621a22a9f7d3134b 182 SUPERFAMILY SSF50104 125 181 7.07E-20 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily AL543_09680 449492c76b80f0d7cb1de9eae411d216 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 289 303 7.0E-5 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 AL543_09680 449492c76b80f0d7cb1de9eae411d216 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 317 330 7.0E-5 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 AL543_09680 449492c76b80f0d7cb1de9eae411d216 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 7.0E-5 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 AL543_09680 449492c76b80f0d7cb1de9eae411d216 507 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 493 9.3E-31 T 11-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain AL543_09680 449492c76b80f0d7cb1de9eae411d216 507 Gene3D G3DSA:3.30.230.10 1 165 7.3E-6 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL543_09680 449492c76b80f0d7cb1de9eae411d216 507 SUPERFAMILY SSF52540 189 500 3.88E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_09680 449492c76b80f0d7cb1de9eae411d216 507 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 493 5.4E-214 T 11-10-2018 IPR004482 Mg chelatase-related protein AL543_09680 449492c76b80f0d7cb1de9eae411d216 507 SUPERFAMILY SSF54211 2 169 4.17E-31 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL543_09680 449492c76b80f0d7cb1de9eae411d216 507 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 2.0E-47 T 11-10-2018 AL543_09680 449492c76b80f0d7cb1de9eae411d216 507 Gene3D G3DSA:3.40.50.300 176 500 2.7E-55 T 11-10-2018 AL543_09680 449492c76b80f0d7cb1de9eae411d216 507 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 391 8.0E-91 T 11-10-2018 IPR000523 Magnesium chelatase ChlI domain AL543_09680 449492c76b80f0d7cb1de9eae411d216 507 SMART SM00382 210 390 1.8E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_07130 7eb2cdebaa97e96f266602502247949c 597 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 305.74 T 11-10-2018 IPR006297 Elongation factor 4 GO:0005525 AL543_07130 7eb2cdebaa97e96f266602502247949c 597 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 5.3E-53 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL543_07130 7eb2cdebaa97e96f266602502247949c 597 PRINTS PR00315 GTP-binding elongation factor signature 6 19 3.8E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL543_07130 7eb2cdebaa97e96f266602502247949c 597 PRINTS PR00315 GTP-binding elongation factor signature 90 101 3.8E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL543_07130 7eb2cdebaa97e96f266602502247949c 597 PRINTS PR00315 GTP-binding elongation factor signature 126 135 3.8E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL543_07130 7eb2cdebaa97e96f266602502247949c 597 PRINTS PR00315 GTP-binding elongation factor signature 74 84 3.8E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL543_07130 7eb2cdebaa97e96f266602502247949c 597 PRINTS PR00315 GTP-binding elongation factor signature 49 57 3.8E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL543_07130 7eb2cdebaa97e96f266602502247949c 597 Gene3D G3DSA:2.40.30.10 186 285 2.0E-35 T 11-10-2018 AL543_07130 7eb2cdebaa97e96f266602502247949c 597 Gene3D G3DSA:3.30.70.870 286 367 1.2E-35 T 11-10-2018 AL543_07130 7eb2cdebaa97e96f266602502247949c 597 Pfam PF03144 Elongation factor Tu domain 2 205 275 4.8E-9 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AL543_07130 7eb2cdebaa97e96f266602502247949c 597 SUPERFAMILY SSF50447 165 288 4.32E-30 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AL543_07130 7eb2cdebaa97e96f266602502247949c 597 Gene3D G3DSA:3.30.70.3380 368 478 2.2E-39 T 11-10-2018 AL543_07130 7eb2cdebaa97e96f266602502247949c 597 Gene3D G3DSA:3.40.50.300 1 185 6.7E-71 T 11-10-2018 AL543_07130 7eb2cdebaa97e96f266602502247949c 597 Pfam PF00679 Elongation factor G C-terminus 399 478 3.7E-19 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like AL543_07130 7eb2cdebaa97e96f266602502247949c 597 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 5.4E-301 T 11-10-2018 IPR006297 Elongation factor 4 GO:0005525 AL543_07130 7eb2cdebaa97e96f266602502247949c 597 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 4.7E-49 T 11-10-2018 IPR013842 GTP-binding protein LepA, C-terminal AL543_07130 7eb2cdebaa97e96f266602502247949c 597 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 176 5.6E-17 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL543_07130 7eb2cdebaa97e96f266602502247949c 597 SUPERFAMILY SSF54980 292 370 1.37E-18 T 11-10-2018 IPR035647 EF-G domain III/V-like AL543_07130 7eb2cdebaa97e96f266602502247949c 597 SUPERFAMILY SSF52540 2 205 9.93E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_07130 7eb2cdebaa97e96f266602502247949c 597 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site AL543_07130 7eb2cdebaa97e96f266602502247949c 597 SUPERFAMILY SSF54980 399 493 6.71E-24 T 11-10-2018 IPR035647 EF-G domain III/V-like AL543_07130 7eb2cdebaa97e96f266602502247949c 597 Gene3D G3DSA:3.30.70.2570 479 553 4.5E-32 T 11-10-2018 IPR038363 LepA, C-terminal domain superfamily AL543_03960 5eb047d1368e79d7272f3d8ec14a576b 145 ProSitePatterns PS00893 Nudix box signature. 48 69 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AL543_03960 5eb047d1368e79d7272f3d8ec14a576b 145 SUPERFAMILY SSF55811 13 118 1.9E-25 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AL543_03960 5eb047d1368e79d7272f3d8ec14a576b 145 Gene3D G3DSA:3.90.79.10 9 137 4.4E-22 T 11-10-2018 AL543_03960 5eb047d1368e79d7272f3d8ec14a576b 145 PRINTS PR00502 NUDIX hydrolase family signature 43 57 2.1E-5 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL543_03960 5eb047d1368e79d7272f3d8ec14a576b 145 PRINTS PR00502 NUDIX hydrolase family signature 57 72 2.1E-5 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL543_03960 5eb047d1368e79d7272f3d8ec14a576b 145 Pfam PF00293 NUDIX domain 21 117 6.0E-14 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL543_08465 8bff17e8d586ce1b48d654b601082142 166 SUPERFAMILY SSF103054 87 165 9.42E-23 T 11-10-2018 IPR023229 Type II secretion system protein M, periplasmic domain superfamily AL543_08465 8bff17e8d586ce1b48d654b601082142 166 Pfam PF04612 Type II secretion system (T2SS), protein M 8 164 5.8E-52 T 11-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 AL543_08465 8bff17e8d586ce1b48d654b601082142 166 PIRSF PIRSF006291 3 165 1.6E-40 T 11-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 AL543_08465 8bff17e8d586ce1b48d654b601082142 166 Gene3D G3DSA:3.30.1360.100 87 166 1.3E-34 T 11-10-2018 AL543_00580 30837ec735e739d507633a4cd1215e0d 263 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 242 258 5.1E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL543_00580 30837ec735e739d507633a4cd1215e0d 263 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 227 242 5.1E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL543_00580 30837ec735e739d507633a4cd1215e0d 263 SMART SM00342 176 258 1.7E-21 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL543_00580 30837ec735e739d507633a4cd1215e0d 263 Pfam PF12833 Helix-turn-helix domain 182 259 8.6E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL543_00580 30837ec735e739d507633a4cd1215e0d 263 Pfam PF02311 AraC-like ligand binding domain 31 144 1.7E-4 T 11-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AL543_00580 30837ec735e739d507633a4cd1215e0d 263 Gene3D G3DSA:1.10.10.60 161 261 2.0E-22 T 11-10-2018 AL543_00580 30837ec735e739d507633a4cd1215e0d 263 SUPERFAMILY SSF46689 213 260 5.38E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_00580 30837ec735e739d507633a4cd1215e0d 263 SUPERFAMILY SSF51182 17 185 1.69E-10 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AL543_12995 16b9f58f8fbd9bc7d3733299c521ae25 142 SUPERFAMILY SSF54919 1 140 1.03E-61 T 11-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL543_12995 16b9f58f8fbd9bc7d3733299c521ae25 142 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 35.998 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL543_12995 16b9f58f8fbd9bc7d3733299c521ae25 142 Gene3D G3DSA:3.30.70.141 1 141 1.3E-58 T 11-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL543_12995 16b9f58f8fbd9bc7d3733299c521ae25 142 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 11-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL543_12995 16b9f58f8fbd9bc7d3733299c521ae25 142 SMART SM00562 3 140 1.2E-91 T 11-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL543_12995 16b9f58f8fbd9bc7d3733299c521ae25 142 Pfam PF00334 Nucleoside diphosphate kinase 4 138 4.7E-58 T 11-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL543_12995 16b9f58f8fbd9bc7d3733299c521ae25 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 9.2E-38 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL543_12995 16b9f58f8fbd9bc7d3733299c521ae25 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 9.2E-38 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL543_12995 16b9f58f8fbd9bc7d3733299c521ae25 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 9.2E-38 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL543_12995 16b9f58f8fbd9bc7d3733299c521ae25 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 9.2E-38 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL543_12995 16b9f58f8fbd9bc7d3733299c521ae25 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 9.2E-38 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL543_13865 54cec21d855c76a0fe520e7a5204c21a 220 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 73 88 - T 11-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 AL543_13865 54cec21d855c76a0fe520e7a5204c21a 220 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 77 130 4.0E-23 T 11-10-2018 AL543_13865 54cec21d855c76a0fe520e7a5204c21a 220 PIRSF PIRSF016262 3 219 2.3E-61 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AL543_13865 54cec21d855c76a0fe520e7a5204c21a 220 Hamap MF_00013 Octanoyltransferase [lipB]. 7 208 37.834 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AL543_13865 54cec21d855c76a0fe520e7a5204c21a 220 Gene3D G3DSA:3.30.930.10 2 206 1.4E-63 T 11-10-2018 AL543_13865 54cec21d855c76a0fe520e7a5204c21a 220 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 29 205 2.6E-71 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AL543_13865 54cec21d855c76a0fe520e7a5204c21a 220 SUPERFAMILY SSF55681 3 207 4.23E-70 T 11-10-2018 AL543_13865 54cec21d855c76a0fe520e7a5204c21a 220 Pfam PF03099 Biotin/lipoate A/B protein ligase family 61 161 5.9E-8 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 AL543_10485 7dcffaac211943e20102fdbd56f5cf39 447 SUPERFAMILY SSF52440 1 113 3.67E-46 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AL543_10485 7dcffaac211943e20102fdbd56f5cf39 447 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL543_10485 7dcffaac211943e20102fdbd56f5cf39 447 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL543_10485 7dcffaac211943e20102fdbd56f5cf39 447 Gene3D G3DSA:3.30.1490.20 131 203 3.1E-157 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AL543_10485 7dcffaac211943e20102fdbd56f5cf39 447 Gene3D G3DSA:3.30.470.20 86 433 3.1E-157 T 11-10-2018 AL543_10485 7dcffaac211943e20102fdbd56f5cf39 447 Gene3D G3DSA:3.40.50.20 1 85 1.5E-34 T 11-10-2018 AL543_10485 7dcffaac211943e20102fdbd56f5cf39 447 SUPERFAMILY SSF51246 331 444 2.62E-42 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AL543_10485 7dcffaac211943e20102fdbd56f5cf39 447 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 5.4E-44 T 11-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AL543_10485 7dcffaac211943e20102fdbd56f5cf39 447 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 3.2E-86 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL543_10485 7dcffaac211943e20102fdbd56f5cf39 447 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 3.5E-244 T 11-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 AL543_10485 7dcffaac211943e20102fdbd56f5cf39 447 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 2.4E-37 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AL543_10485 7dcffaac211943e20102fdbd56f5cf39 447 SMART SM00878 336 441 1.0E-63 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AL543_10485 7dcffaac211943e20102fdbd56f5cf39 447 SUPERFAMILY SSF56059 83 346 1.43E-70 T 11-10-2018 AL543_03510 0b7e8f3db42b006a564194cd669cfeb5 349 Gene3D G3DSA:3.40.50.2300 155 341 6.1E-108 T 11-10-2018 AL543_03510 0b7e8f3db42b006a564194cd669cfeb5 349 SUPERFAMILY SSF53822 47 311 5.78E-31 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AL543_03510 0b7e8f3db42b006a564194cd669cfeb5 349 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 46 301 1.8E-29 T 11-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain AL543_03510 0b7e8f3db42b006a564194cd669cfeb5 349 TIGRFAM TIGR02955 TMAO_TorT: TMAO reductase system periplasmic protein TorT 47 345 3.0E-141 T 11-10-2018 IPR014301 TMAO reductase system, periplasmic protein TorT AL543_03510 0b7e8f3db42b006a564194cd669cfeb5 349 Gene3D G3DSA:3.40.50.2300 48 317 6.1E-108 T 11-10-2018 AL543_12020 9553eac38e0730bdcb55d6888debb315 162 SUPERFAMILY SSF101738 9 114 2.75E-47 T 11-10-2018 IPR036760 SspB-like superfamily AL543_12020 9553eac38e0730bdcb55d6888debb315 162 Gene3D G3DSA:2.30.30.220 7 135 3.9E-50 T 11-10-2018 IPR036760 SspB-like superfamily AL543_12020 9553eac38e0730bdcb55d6888debb315 162 PIRSF PIRSF005276 7 162 4.3E-60 T 11-10-2018 IPR007481 Stringent starvation protein B AL543_12020 9553eac38e0730bdcb55d6888debb315 162 Pfam PF04386 Stringent starvation protein B 13 162 1.7E-40 T 11-10-2018 IPR007481 Stringent starvation protein B AL543_06140 d495879cb6d601287c48ff22c5a3a153 241 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 4 226 1.5E-106 T 11-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_06140 d495879cb6d601287c48ff22c5a3a153 241 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 11-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 AL543_06140 d495879cb6d601287c48ff22c5a3a153 241 PRINTS PR00395 Ribosomal protein S2 signature 37 46 6.8E-38 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_06140 d495879cb6d601287c48ff22c5a3a153 241 PRINTS PR00395 Ribosomal protein S2 signature 158 175 6.8E-38 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_06140 d495879cb6d601287c48ff22c5a3a153 241 PRINTS PR00395 Ribosomal protein S2 signature 175 186 6.8E-38 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_06140 d495879cb6d601287c48ff22c5a3a153 241 PRINTS PR00395 Ribosomal protein S2 signature 196 210 6.8E-38 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_06140 d495879cb6d601287c48ff22c5a3a153 241 PRINTS PR00395 Ribosomal protein S2 signature 6 24 6.8E-38 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_06140 d495879cb6d601287c48ff22c5a3a153 241 PRINTS PR00395 Ribosomal protein S2 signature 87 104 6.8E-38 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_06140 d495879cb6d601287c48ff22c5a3a153 241 SUPERFAMILY SSF52313 6 235 2.88E-95 T 11-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily AL543_06140 d495879cb6d601287c48ff22c5a3a153 241 Pfam PF00318 Ribosomal protein S2 9 224 4.0E-93 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_06140 d495879cb6d601287c48ff22c5a3a153 241 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 40.696 T 11-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_06140 d495879cb6d601287c48ff22c5a3a153 241 Gene3D G3DSA:1.10.287.610 103 150 8.3E-91 T 11-10-2018 AL543_06140 d495879cb6d601287c48ff22c5a3a153 241 Gene3D G3DSA:3.40.50.10490 8 218 8.3E-91 T 11-10-2018 AL543_06140 d495879cb6d601287c48ff22c5a3a153 241 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 11-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 AL543_00230 1a2790f4b61577a8286be57a6abfbacf 507 Pfam PF13245 AAA domain 24 290 3.9E-7 T 11-10-2018 AL543_00230 1a2790f4b61577a8286be57a6abfbacf 507 SUPERFAMILY SSF52540 8 484 2.73E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_00230 1a2790f4b61577a8286be57a6abfbacf 507 Gene3D G3DSA:3.40.50.300 317 498 4.9E-16 T 11-10-2018 AL543_18805 eefc60ad0ff85210ff88afc1d2f51a79 475 Pfam PF02706 Chain length determinant protein 8 92 1.5E-6 T 11-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 AL543_13720 b1de4ee12f915051be71428573c90fc4 1036 Gene3D G3DSA:3.30.70.1430 556 654 0.0 T 11-10-2018 AL543_13720 b1de4ee12f915051be71428573c90fc4 1036 Gene3D G3DSA:1.20.1640.10 502 1005 0.0 T 11-10-2018 AL543_13720 b1de4ee12f915051be71428573c90fc4 1036 Gene3D G3DSA:3.30.70.1320 134 326 0.0 T 11-10-2018 AL543_13720 b1de4ee12f915051be71428573c90fc4 1036 Gene3D G3DSA:3.30.70.1430 40 799 0.0 T 11-10-2018 AL543_13720 b1de4ee12f915051be71428573c90fc4 1036 SUPERFAMILY SSF82693 40 134 1.1E-25 T 11-10-2018 AL543_13720 b1de4ee12f915051be71428573c90fc4 1036 SUPERFAMILY SSF82714 183 266 1.14E-14 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL543_13720 b1de4ee12f915051be71428573c90fc4 1036 SUPERFAMILY SSF82693 554 657 4.39E-17 T 11-10-2018 AL543_13720 b1de4ee12f915051be71428573c90fc4 1036 Gene3D G3DSA:3.30.2090.10 703 791 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL543_13720 b1de4ee12f915051be71428573c90fc4 1036 SUPERFAMILY SSF82693 139 324 5.75E-18 T 11-10-2018 AL543_13720 b1de4ee12f915051be71428573c90fc4 1036 SUPERFAMILY SSF82714 704 787 1.44E-16 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL543_13720 b1de4ee12f915051be71428573c90fc4 1036 Gene3D G3DSA:1.20.1640.10 10 501 0.0 T 11-10-2018 AL543_13720 b1de4ee12f915051be71428573c90fc4 1036 Gene3D G3DSA:3.30.70.1440 655 848 0.0 T 11-10-2018 AL543_13720 b1de4ee12f915051be71428573c90fc4 1036 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 1.2E-70 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_13720 b1de4ee12f915051be71428573c90fc4 1036 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.2E-70 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_13720 b1de4ee12f915051be71428573c90fc4 1036 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.2E-70 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_13720 b1de4ee12f915051be71428573c90fc4 1036 PRINTS PR00702 Acriflavin resistance protein family signature 611 625 1.2E-70 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_13720 b1de4ee12f915051be71428573c90fc4 1036 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.2E-70 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_13720 b1de4ee12f915051be71428573c90fc4 1036 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 1.2E-70 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_13720 b1de4ee12f915051be71428573c90fc4 1036 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.2E-70 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_13720 b1de4ee12f915051be71428573c90fc4 1036 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 1.2E-70 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_13720 b1de4ee12f915051be71428573c90fc4 1036 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.2E-70 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_13720 b1de4ee12f915051be71428573c90fc4 1036 SUPERFAMILY SSF82866 792 1009 4.19E-47 T 11-10-2018 AL543_13720 b1de4ee12f915051be71428573c90fc4 1036 SUPERFAMILY SSF82866 290 490 2.88E-46 T 11-10-2018 AL543_13720 b1de4ee12f915051be71428573c90fc4 1036 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 1.8E-278 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_13720 b1de4ee12f915051be71428573c90fc4 1036 Gene3D G3DSA:3.30.2090.10 178 269 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL543_19350 e191169422d0a08406b6ffc709a8e39d 324 Gene3D G3DSA:1.20.272.10 213 322 1.2E-7 T 11-10-2018 AL543_19350 e191169422d0a08406b6ffc709a8e39d 324 SUPERFAMILY SSF52540 9 191 1.21E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_19350 e191169422d0a08406b6ffc709a8e39d 324 Pfam PF13177 DNA polymerase III, delta subunit 21 168 3.8E-45 T 11-10-2018 AL543_19350 e191169422d0a08406b6ffc709a8e39d 324 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 18 200 6.9E-63 T 11-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL543_19350 e191169422d0a08406b6ffc709a8e39d 324 Gene3D G3DSA:3.40.50.300 6 169 5.7E-49 T 11-10-2018 AL543_19350 e191169422d0a08406b6ffc709a8e39d 324 SUPERFAMILY SSF48019 210 322 5.78E-22 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AL543_19350 e191169422d0a08406b6ffc709a8e39d 324 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 211 317 6.4E-19 T 11-10-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL543_19445 4f3d1c1a010f3c8d4cbc561f70f78f9e 895 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 719 739 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AL543_19445 4f3d1c1a010f3c8d4cbc561f70f78f9e 895 Gene3D G3DSA:3.40.50.1970 456 642 4.7E-58 T 11-10-2018 AL543_19445 4f3d1c1a010f3c8d4cbc561f70f78f9e 895 Gene3D G3DSA:3.40.309.10 217 400 7.2E-169 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AL543_19445 4f3d1c1a010f3c8d4cbc561f70f78f9e 895 SUPERFAMILY SSF53720 6 454 3.01E-84 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AL543_19445 4f3d1c1a010f3c8d4cbc561f70f78f9e 895 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 631 659 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AL543_19445 4f3d1c1a010f3c8d4cbc561f70f78f9e 895 PIRSF PIRSF000111 1 865 0.0 T 11-10-2018 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 AL543_19445 4f3d1c1a010f3c8d4cbc561f70f78f9e 895 Gene3D G3DSA:1.20.1090.10 643 864 1.6E-60 T 11-10-2018 AL543_19445 4f3d1c1a010f3c8d4cbc561f70f78f9e 895 SUPERFAMILY SSF56796 452 863 1.09E-115 T 11-10-2018 AL543_19445 4f3d1c1a010f3c8d4cbc561f70f78f9e 895 Gene3D G3DSA:3.40.605.10 15 216 7.2E-169 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AL543_19445 4f3d1c1a010f3c8d4cbc561f70f78f9e 895 Pfam PF00465 Iron-containing alcohol dehydrogenase 458 850 1.2E-113 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AL543_19445 4f3d1c1a010f3c8d4cbc561f70f78f9e 895 Pfam PF00171 Aldehyde dehydrogenase family 5 402 4.5E-25 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AL543_19445 4f3d1c1a010f3c8d4cbc561f70f78f9e 895 Gene3D G3DSA:3.40.605.10 401 455 1.7E-7 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AL543_15590 ae563ba3f840b36d399ef5da6ae40066 894 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 644 687 2.2E-7 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AL543_15590 ae563ba3f840b36d399ef5da6ae40066 894 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 537 583 1.6E-8 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AL543_15590 ae563ba3f840b36d399ef5da6ae40066 894 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 817 863 9.4E-13 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AL543_15590 ae563ba3f840b36d399ef5da6ae40066 894 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 735 761 1.8E-6 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AL543_15590 ae563ba3f840b36d399ef5da6ae40066 894 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 709 0.3 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AL543_15590 ae563ba3f840b36d399ef5da6ae40066 894 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 587 636 5.7E-11 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AL543_15590 ae563ba3f840b36d399ef5da6ae40066 894 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 767 813 5.9E-15 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AL543_15590 ae563ba3f840b36d399ef5da6ae40066 894 Gene3D G3DSA:3.30.1360.40 236 332 1.1E-236 T 11-10-2018 AL543_15590 ae563ba3f840b36d399ef5da6ae40066 894 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 505 1.2E-158 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL543_15590 ae563ba3f840b36d399ef5da6ae40066 894 Gene3D G3DSA:2.120.10.90 534 865 9.3E-124 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AL543_15590 ae563ba3f840b36d399ef5da6ae40066 894 Gene3D G3DSA:1.10.268.10 369 492 1.1E-236 T 11-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AL543_15590 ae563ba3f840b36d399ef5da6ae40066 894 SUPERFAMILY SSF101904 532 873 1.57E-106 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AL543_15590 ae563ba3f840b36d399ef5da6ae40066 894 SMART SM00434 11 498 0.0 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL543_15590 ae563ba3f840b36d399ef5da6ae40066 894 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 865 24.721 T 11-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL543_15590 ae563ba3f840b36d399ef5da6ae40066 894 SUPERFAMILY SSF56719 30 520 1.7E-187 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AL543_15590 ae563ba3f840b36d399ef5da6ae40066 894 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 863 0.0 T 11-10-2018 AL543_15590 ae563ba3f840b36d399ef5da6ae40066 894 Gene3D G3DSA:3.90.199.10 33 520 1.1E-236 T 11-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 AL543_12330 1b5d7a67cb9bca8d88bdc7332189fdb1 151 SUPERFAMILY SSF74942 84 151 8.76E-17 T 11-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily AL543_12330 1b5d7a67cb9bca8d88bdc7332189fdb1 151 Pfam PF02576 RimP N-terminal domain 12 83 2.2E-29 T 11-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal AL543_12330 1b5d7a67cb9bca8d88bdc7332189fdb1 151 SUPERFAMILY SSF75420 2 83 8.37E-26 T 11-10-2018 IPR035956 RimP, N-terminal domain superfamily AL543_12330 1b5d7a67cb9bca8d88bdc7332189fdb1 151 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 151 24.36 T 11-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 AL543_12330 1b5d7a67cb9bca8d88bdc7332189fdb1 151 Gene3D G3DSA:3.30.300.70 1 80 3.0E-27 T 11-10-2018 IPR035956 RimP, N-terminal domain superfamily AL543_12330 1b5d7a67cb9bca8d88bdc7332189fdb1 151 Pfam PF17384 RimP C-terminal SH3 domain 86 151 6.9E-21 T 11-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal AL543_07195 259269ad28776f68421c196afd848ab8 191 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 5 189 34.9 T 11-10-2018 IPR011978 Uncharacterised protein family UPF0149 AL543_07195 259269ad28776f68421c196afd848ab8 191 Pfam PF03695 Uncharacterised protein family (UPF0149) 12 179 1.2E-32 T 11-10-2018 IPR011978 Uncharacterised protein family UPF0149 AL543_07195 259269ad28776f68421c196afd848ab8 191 Gene3D G3DSA:1.20.120.740 4 191 1.2E-45 T 11-10-2018 AL543_07195 259269ad28776f68421c196afd848ab8 191 SUPERFAMILY SSF101327 7 178 4.71E-41 T 11-10-2018 IPR036255 YgfB-like superfamily AL543_03425 9dac7ce620b8ea6e953a1ba7a50ebdaa 254 Pfam PF13531 Bacterial extracellular solute-binding protein 26 250 4.0E-40 T 11-10-2018 AL543_03425 9dac7ce620b8ea6e953a1ba7a50ebdaa 254 PIRSF PIRSF004846 1 253 1.3E-58 T 11-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 AL543_03425 9dac7ce620b8ea6e953a1ba7a50ebdaa 254 SUPERFAMILY SSF53850 24 250 3.31E-56 T 11-10-2018 AL543_03425 9dac7ce620b8ea6e953a1ba7a50ebdaa 254 Gene3D G3DSA:3.40.190.10 104 215 3.4E-78 T 11-10-2018 AL543_03425 9dac7ce620b8ea6e953a1ba7a50ebdaa 254 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 31 248 4.8E-57 T 11-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 AL543_03425 9dac7ce620b8ea6e953a1ba7a50ebdaa 254 Gene3D G3DSA:3.40.190.10 28 249 3.4E-78 T 11-10-2018 AL543_07930 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 5.7E-11 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL543_07930 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 5.7E-11 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL543_07930 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 SUPERFAMILY SSF51206 8 137 6.42E-35 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like AL543_07930 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 SUPERFAMILY SSF46785 139 207 2.69E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_07930 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 SMART SM00100 2 122 1.5E-26 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AL543_07930 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 11-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site AL543_07930 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 11-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 AL543_07930 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 Gene3D G3DSA:1.10.10.10 139 207 1.6E-35 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_07930 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 11-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site AL543_07930 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 8.8E-16 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL543_07930 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 Gene3D G3DSA:2.60.120.10 10 138 2.3E-43 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL543_07930 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 2.7E-23 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AL543_07930 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 SMART SM00419 160 208 4.2E-17 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL543_14815 94a50a7738449a683488e55ebb827ddd 321 Gene3D G3DSA:3.40.50.2300 143 315 1.1E-106 T 11-10-2018 AL543_14815 94a50a7738449a683488e55ebb827ddd 321 Gene3D G3DSA:3.40.50.2300 46 292 1.1E-106 T 11-10-2018 AL543_14815 94a50a7738449a683488e55ebb827ddd 321 Pfam PF04392 ABC transporter substrate binding protein 29 320 5.5E-122 T 11-10-2018 IPR007487 ABC transporter, substrate-binding protein AL543_14815 94a50a7738449a683488e55ebb827ddd 321 SUPERFAMILY SSF53822 43 275 6.56E-19 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AL543_11610 d761fe06a2184c0cf0bcf0001aa0b731 694 SUPERFAMILY SSF52518 30 349 7.94E-121 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AL543_11610 d761fe06a2184c0cf0bcf0001aa0b731 694 SUPERFAMILY SSF52922 563 694 1.83E-43 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AL543_11610 d761fe06a2184c0cf0bcf0001aa0b731 694 Gene3D G3DSA:3.40.50.970 30 355 5.1E-133 T 11-10-2018 AL543_11610 d761fe06a2184c0cf0bcf0001aa0b731 694 Gene3D G3DSA:3.40.50.970 356 567 4.2E-84 T 11-10-2018 AL543_11610 d761fe06a2184c0cf0bcf0001aa0b731 694 Pfam PF02780 Transketolase, C-terminal domain 571 685 2.4E-18 T 11-10-2018 IPR033248 Transketolase, C-terminal domain AL543_11610 d761fe06a2184c0cf0bcf0001aa0b731 694 ProSitePatterns PS00802 Transketolase signature 2. 497 513 - T 11-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL543_11610 d761fe06a2184c0cf0bcf0001aa0b731 694 TIGRFAM TIGR00232 tktlase_bact: transketolase 34 693 0.0 T 11-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 AL543_11610 d761fe06a2184c0cf0bcf0001aa0b731 694 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 33 363 6.9E-169 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL543_11610 d761fe06a2184c0cf0bcf0001aa0b731 694 Gene3D G3DSA:3.40.50.920 568 694 1.4E-43 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AL543_11610 d761fe06a2184c0cf0bcf0001aa0b731 694 SUPERFAMILY SSF52518 362 555 7.07E-68 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AL543_11610 d761fe06a2184c0cf0bcf0001aa0b731 694 Pfam PF02779 Transketolase, pyrimidine binding domain 384 554 1.4E-47 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL543_11610 d761fe06a2184c0cf0bcf0001aa0b731 694 SMART SM00861 384 555 4.9E-67 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL543_11610 d761fe06a2184c0cf0bcf0001aa0b731 694 ProSitePatterns PS00801 Transketolase signature 1. 41 61 - T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL543_12815 35c918f543d32de99c24ba0e65f5e716 84 SUPERFAMILY SSF54862 5 72 2.69E-17 T 11-10-2018 AL543_12815 35c918f543d32de99c24ba0e65f5e716 84 Pfam PF12838 4Fe-4S dicluster domain 8 55 1.3E-6 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL543_12815 35c918f543d32de99c24ba0e65f5e716 84 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL543_12815 35c918f543d32de99c24ba0e65f5e716 84 Gene3D G3DSA:3.30.70.20 2 83 4.1E-34 T 11-10-2018 AL543_11715 462cd34ab78cf71cb05bea013adbb6a9 339 SUPERFAMILY SSF53067 3 123 3.32E-31 T 11-10-2018 AL543_11715 462cd34ab78cf71cb05bea013adbb6a9 339 Gene3D G3DSA:3.30.420.40 129 293 1.9E-133 T 11-10-2018 AL543_11715 462cd34ab78cf71cb05bea013adbb6a9 339 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 64.277 T 11-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 AL543_11715 462cd34ab78cf71cb05bea013adbb6a9 339 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 5 306 3.9E-126 T 11-10-2018 IPR017861 Kae1/TsaD family AL543_11715 462cd34ab78cf71cb05bea013adbb6a9 339 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 11-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 AL543_11715 462cd34ab78cf71cb05bea013adbb6a9 339 SUPERFAMILY SSF53067 101 309 4.26E-44 T 11-10-2018 AL543_11715 462cd34ab78cf71cb05bea013adbb6a9 339 Gene3D G3DSA:3.30.420.40 3 315 1.9E-133 T 11-10-2018 AL543_11715 462cd34ab78cf71cb05bea013adbb6a9 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 5.8E-52 T 11-10-2018 IPR017861 Kae1/TsaD family AL543_11715 462cd34ab78cf71cb05bea013adbb6a9 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 5.8E-52 T 11-10-2018 IPR017861 Kae1/TsaD family AL543_11715 462cd34ab78cf71cb05bea013adbb6a9 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 5.8E-52 T 11-10-2018 IPR017861 Kae1/TsaD family AL543_11715 462cd34ab78cf71cb05bea013adbb6a9 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 5.8E-52 T 11-10-2018 IPR017861 Kae1/TsaD family AL543_11715 462cd34ab78cf71cb05bea013adbb6a9 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 5.8E-52 T 11-10-2018 IPR017861 Kae1/TsaD family AL543_11715 462cd34ab78cf71cb05bea013adbb6a9 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 5.8E-52 T 11-10-2018 IPR017861 Kae1/TsaD family AL543_11715 462cd34ab78cf71cb05bea013adbb6a9 339 Pfam PF00814 Glycoprotease family 24 307 7.8E-105 T 11-10-2018 IPR000905 Gcp-like domain AL543_11715 462cd34ab78cf71cb05bea013adbb6a9 339 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 4.2E-136 T 11-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 AL543_17865 85ec7fde079f8bc1b93bf6c85ebf7807 147 Gene3D G3DSA:1.10.10.10 1 54 5.2E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_17865 85ec7fde079f8bc1b93bf6c85ebf7807 147 Pfam PF01037 Lrp/AsnC ligand binding domain 68 140 1.5E-14 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AL543_17865 85ec7fde079f8bc1b93bf6c85ebf7807 147 Gene3D G3DSA:3.30.70.920 55 137 1.9E-18 T 11-10-2018 AL543_17865 85ec7fde079f8bc1b93bf6c85ebf7807 147 SUPERFAMILY SSF54909 63 146 3.89E-14 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AL543_17865 85ec7fde079f8bc1b93bf6c85ebf7807 147 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 3.5E-15 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL543_17865 85ec7fde079f8bc1b93bf6c85ebf7807 147 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 3.5E-15 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL543_17865 85ec7fde079f8bc1b93bf6c85ebf7807 147 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 3.5E-15 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL543_17865 85ec7fde079f8bc1b93bf6c85ebf7807 147 SUPERFAMILY SSF46785 1 59 5.06E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_17865 85ec7fde079f8bc1b93bf6c85ebf7807 147 SMART SM00344 1 110 1.4E-31 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AL543_17865 85ec7fde079f8bc1b93bf6c85ebf7807 147 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 9.7E-17 T 11-10-2018 AL543_10105 4fdbaa576a6de3dcfa9b44590be6d407 319 Gene3D G3DSA:3.40.50.1980 20 140 3.2E-30 T 11-10-2018 AL543_10105 4fdbaa576a6de3dcfa9b44590be6d407 319 Pfam PF01497 Periplasmic binding protein 56 286 3.6E-19 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain AL543_10105 4fdbaa576a6de3dcfa9b44590be6d407 319 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 104 119 2.9E-6 T 11-10-2018 AL543_10105 4fdbaa576a6de3dcfa9b44590be6d407 319 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 293 306 2.9E-6 T 11-10-2018 AL543_10105 4fdbaa576a6de3dcfa9b44590be6d407 319 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 73 91 2.9E-6 T 11-10-2018 AL543_10105 4fdbaa576a6de3dcfa9b44590be6d407 319 Gene3D G3DSA:3.40.50.1980 142 314 1.3E-43 T 11-10-2018 AL543_10105 4fdbaa576a6de3dcfa9b44590be6d407 319 SUPERFAMILY SSF53807 53 312 2.9E-49 T 11-10-2018 AL543_13660 48961fee555d530a49e3475fb42e1420 186 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 152 1.5E-39 T 11-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 AL543_13660 48961fee555d530a49e3475fb42e1420 186 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 4 178 5.5E-80 T 11-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 AL543_13660 48961fee555d530a49e3475fb42e1420 186 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 5 154 6.0E-37 T 11-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 AL543_13660 48961fee555d530a49e3475fb42e1420 186 PIRSF PIRSF004682 1 185 6.3E-64 T 11-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 AL543_13660 48961fee555d530a49e3475fb42e1420 186 Pfam PF13242 HAD-hyrolase-like 107 176 8.5E-13 T 11-10-2018 AL543_13660 48961fee555d530a49e3475fb42e1420 186 Gene3D G3DSA:3.40.50.1000 2 186 1.5E-61 T 11-10-2018 IPR023214 HAD superfamily AL543_13660 48961fee555d530a49e3475fb42e1420 186 SUPERFAMILY SSF56784 4 182 2.58E-50 T 11-10-2018 IPR036412 HAD-like superfamily AL543_15835 e63826a747b5fe4f4de71a36d3871e94 466 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 3.1E-10 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AL543_15835 e63826a747b5fe4f4de71a36d3871e94 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 460 2.5E-80 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL543_15835 e63826a747b5fe4f4de71a36d3871e94 466 SUPERFAMILY SSF50249 15 102 9.52E-17 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL543_15835 e63826a747b5fe4f4de71a36d3871e94 466 Gene3D G3DSA:3.30.930.10 109 465 1.5E-109 T 11-10-2018 AL543_15835 e63826a747b5fe4f4de71a36d3871e94 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 466 2.8E-205 T 11-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 AL543_15835 e63826a747b5fe4f4de71a36d3871e94 466 Gene3D G3DSA:2.40.50.140 4 105 2.1E-19 T 11-10-2018 AL543_15835 e63826a747b5fe4f4de71a36d3871e94 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 45.845 T 11-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 AL543_15835 e63826a747b5fe4f4de71a36d3871e94 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 2.3E-14 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL543_15835 e63826a747b5fe4f4de71a36d3871e94 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 2.3E-14 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL543_15835 e63826a747b5fe4f4de71a36d3871e94 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 2.3E-14 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL543_15835 e63826a747b5fe4f4de71a36d3871e94 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 2.3E-14 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL543_15835 e63826a747b5fe4f4de71a36d3871e94 466 SUPERFAMILY SSF55681 104 464 2.59E-95 T 11-10-2018 AL543_02220 67157df1f47c6ad5ec87ee1de350dcc5 226 SUPERFAMILY SSF51206 25 142 2.36E-22 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like AL543_02220 67157df1f47c6ad5ec87ee1de350dcc5 226 Pfam PF00027 Cyclic nucleotide-binding domain 34 121 2.1E-16 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AL543_02220 67157df1f47c6ad5ec87ee1de350dcc5 226 SMART SM00100 14 137 6.5E-7 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AL543_02220 67157df1f47c6ad5ec87ee1de350dcc5 226 Gene3D G3DSA:2.60.120.1460 25 222 1.5E-18 T 11-10-2018 AL543_09655 ecf74746dfa569e716fcbfc1de12543f 510 Gene3D G3DSA:3.40.50.1100 20 322 2.6E-134 T 11-10-2018 AL543_09655 ecf74746dfa569e716fcbfc1de12543f 510 SUPERFAMILY SSF53686 10 360 2.1E-106 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL543_09655 ecf74746dfa569e716fcbfc1de12543f 510 SUPERFAMILY SSF55021 415 508 2.08E-26 T 11-10-2018 AL543_09655 ecf74746dfa569e716fcbfc1de12543f 510 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 48 61 - T 11-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AL543_09655 ecf74746dfa569e716fcbfc1de12543f 510 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 10 508 4.4E-251 T 11-10-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AL543_09655 ecf74746dfa569e716fcbfc1de12543f 510 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 324 414 6.6E-24 T 11-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AL543_09655 ecf74746dfa569e716fcbfc1de12543f 510 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 420 508 2.7E-24 T 11-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AL543_09655 ecf74746dfa569e716fcbfc1de12543f 510 SUPERFAMILY SSF55021 332 418 3.2E-27 T 11-10-2018 AL543_09655 ecf74746dfa569e716fcbfc1de12543f 510 Gene3D G3DSA:3.40.50.1100 56 152 2.6E-134 T 11-10-2018 AL543_09655 ecf74746dfa569e716fcbfc1de12543f 510 Gene3D G3DSA:3.40.1020.10 333 510 5.6E-71 T 11-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AL543_09655 ecf74746dfa569e716fcbfc1de12543f 510 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 24 311 8.0E-84 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AL543_19855 feabe841f2e3e0d35f7755ccaf9c324a 175 SUPERFAMILY SSF52218 1 173 2.68E-33 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL543_19855 feabe841f2e3e0d35f7755ccaf9c324a 175 Gene3D G3DSA:3.40.50.360 1 175 6.5E-31 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL543_19855 feabe841f2e3e0d35f7755ccaf9c324a 175 Pfam PF03358 NADPH-dependent FMN reductase 1 133 3.7E-23 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AL543_19115 a46a18f21f46c4059eb9f4831f2950cd 180 SMART SM00530 13 68 7.3E-13 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL543_19115 a46a18f21f46c4059eb9f4831f2950cd 180 SUPERFAMILY SSF51182 53 178 3.0E-20 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AL543_19115 a46a18f21f46c4059eb9f4831f2950cd 180 Gene3D G3DSA:1.10.260.40 1 86 2.8E-23 T 11-10-2018 AL543_19115 a46a18f21f46c4059eb9f4831f2950cd 180 Gene3D G3DSA:2.60.120.10 87 180 1.9E-32 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL543_19115 a46a18f21f46c4059eb9f4831f2950cd 180 SUPERFAMILY SSF47413 5 72 1.05E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL543_19115 a46a18f21f46c4059eb9f4831f2950cd 180 Pfam PF07883 Cupin domain 116 170 1.1E-7 T 11-10-2018 IPR013096 Cupin 2, conserved barrel AL543_19115 a46a18f21f46c4059eb9f4831f2950cd 180 Pfam PF01381 Helix-turn-helix 14 64 1.4E-13 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL543_11350 b4206259d854bae2c6a8fb02742c90d6 156 PRINTS PR01467 Bacterial arginine repressor signature 42 57 2.6E-23 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AL543_11350 b4206259d854bae2c6a8fb02742c90d6 156 PRINTS PR01467 Bacterial arginine repressor signature 121 136 2.6E-23 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AL543_11350 b4206259d854bae2c6a8fb02742c90d6 156 PRINTS PR01467 Bacterial arginine repressor signature 90 103 2.6E-23 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AL543_11350 b4206259d854bae2c6a8fb02742c90d6 156 PRINTS PR01467 Bacterial arginine repressor signature 25 38 2.6E-23 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AL543_11350 b4206259d854bae2c6a8fb02742c90d6 156 Gene3D G3DSA:1.10.10.10 1 74 7.0E-34 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_11350 b4206259d854bae2c6a8fb02742c90d6 156 TIGRFAM TIGR01529 argR_whole: arginine repressor 10 151 1.2E-41 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AL543_11350 b4206259d854bae2c6a8fb02742c90d6 156 SUPERFAMILY SSF55252 82 151 1.57E-18 T 11-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 AL543_11350 b4206259d854bae2c6a8fb02742c90d6 156 SUPERFAMILY SSF46785 3 76 3.54E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_11350 b4206259d854bae2c6a8fb02742c90d6 156 Pfam PF01316 Arginine repressor, DNA binding domain 6 74 6.1E-23 T 11-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 AL543_11350 b4206259d854bae2c6a8fb02742c90d6 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 145 2.0E-21 T 11-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 AL543_11350 b4206259d854bae2c6a8fb02742c90d6 156 Pfam PF02863 Arginine repressor, C-terminal domain 82 146 2.6E-20 T 11-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 AL543_11350 b4206259d854bae2c6a8fb02742c90d6 156 Gene3D G3DSA:3.30.1360.40 75 156 9.7E-33 T 11-10-2018 AL543_11350 b4206259d854bae2c6a8fb02742c90d6 156 Hamap MF_00173 Arginine repressor [argR]. 1 155 58.17 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AL543_00405 598d40a0a5b4543b950b1e97accb04c3 379 Pfam PF05651 Putative sugar diacid recognition 3 136 1.7E-51 T 11-10-2018 IPR008599 Putative sugar diacid recognition AL543_00405 598d40a0a5b4543b950b1e97accb04c3 379 Pfam PF13556 PucR C-terminal helix-turn-helix domain 317 374 3.8E-20 T 11-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain AL543_00405 598d40a0a5b4543b950b1e97accb04c3 379 Gene3D G3DSA:1.10.10.2840 252 379 4.3E-21 T 11-10-2018 AL543_00405 598d40a0a5b4543b950b1e97accb04c3 379 SUPERFAMILY SSF46689 322 351 1.34E-5 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_15230 877828d5d6085344183e4c6ace72c971 418 Pfam PF00266 Aminotransferase class-V 28 404 1.8E-68 T 11-10-2018 IPR000192 Aminotransferase class V domain AL543_15230 877828d5d6085344183e4c6ace72c971 418 Gene3D G3DSA:3.40.640.10 36 292 2.1E-134 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL543_15230 877828d5d6085344183e4c6ace72c971 418 Gene3D G3DSA:3.90.1150.10 27 408 2.1E-134 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL543_15230 877828d5d6085344183e4c6ace72c971 418 TIGRFAM TIGR01976 am_tr_V_VC1184: cysteine desulfurase family protein 6 408 1.0E-180 T 11-10-2018 IPR011340 Cysteine desulfurase-related AL543_15230 877828d5d6085344183e4c6ace72c971 418 SUPERFAMILY SSF53383 8 412 2.69E-96 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL543_01865 ac055a7de74e4ba465d1c3fce3260f0a 153 SMART SM01321 11 129 7.1E-39 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AL543_01865 ac055a7de74e4ba465d1c3fce3260f0a 153 Pfam PF01797 Transposase IS200 like 12 129 1.0E-36 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AL543_01865 ac055a7de74e4ba465d1c3fce3260f0a 153 Gene3D G3DSA:3.30.70.1290 3 136 3.9E-41 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 AL543_01865 ac055a7de74e4ba465d1c3fce3260f0a 153 SUPERFAMILY SSF143422 1 129 8.11E-47 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 AL543_14210 ac055a7de74e4ba465d1c3fce3260f0a 153 SMART SM01321 11 129 7.1E-39 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AL543_14210 ac055a7de74e4ba465d1c3fce3260f0a 153 Pfam PF01797 Transposase IS200 like 12 129 1.0E-36 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AL543_14210 ac055a7de74e4ba465d1c3fce3260f0a 153 Gene3D G3DSA:3.30.70.1290 3 136 3.9E-41 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 AL543_14210 ac055a7de74e4ba465d1c3fce3260f0a 153 SUPERFAMILY SSF143422 1 129 8.11E-47 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 AL543_13180 ac055a7de74e4ba465d1c3fce3260f0a 153 SMART SM01321 11 129 7.1E-39 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AL543_13180 ac055a7de74e4ba465d1c3fce3260f0a 153 Pfam PF01797 Transposase IS200 like 12 129 1.0E-36 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AL543_13180 ac055a7de74e4ba465d1c3fce3260f0a 153 Gene3D G3DSA:3.30.70.1290 3 136 3.9E-41 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 AL543_13180 ac055a7de74e4ba465d1c3fce3260f0a 153 SUPERFAMILY SSF143422 1 129 8.11E-47 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 AL543_17750 ac055a7de74e4ba465d1c3fce3260f0a 153 SMART SM01321 11 129 7.1E-39 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AL543_17750 ac055a7de74e4ba465d1c3fce3260f0a 153 Pfam PF01797 Transposase IS200 like 12 129 1.0E-36 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AL543_17750 ac055a7de74e4ba465d1c3fce3260f0a 153 Gene3D G3DSA:3.30.70.1290 3 136 3.9E-41 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 AL543_17750 ac055a7de74e4ba465d1c3fce3260f0a 153 SUPERFAMILY SSF143422 1 129 8.11E-47 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 AL543_18685 ac055a7de74e4ba465d1c3fce3260f0a 153 SMART SM01321 11 129 7.1E-39 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AL543_18685 ac055a7de74e4ba465d1c3fce3260f0a 153 Pfam PF01797 Transposase IS200 like 12 129 1.0E-36 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AL543_18685 ac055a7de74e4ba465d1c3fce3260f0a 153 Gene3D G3DSA:3.30.70.1290 3 136 3.9E-41 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 AL543_18685 ac055a7de74e4ba465d1c3fce3260f0a 153 SUPERFAMILY SSF143422 1 129 8.11E-47 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 AL543_02055 ac055a7de74e4ba465d1c3fce3260f0a 153 SMART SM01321 11 129 7.1E-39 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AL543_02055 ac055a7de74e4ba465d1c3fce3260f0a 153 Pfam PF01797 Transposase IS200 like 12 129 1.0E-36 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AL543_02055 ac055a7de74e4ba465d1c3fce3260f0a 153 Gene3D G3DSA:3.30.70.1290 3 136 3.9E-41 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 AL543_02055 ac055a7de74e4ba465d1c3fce3260f0a 153 SUPERFAMILY SSF143422 1 129 8.11E-47 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 AL543_10690 5cab817c0dcd78540f6ec10395b83dc8 233 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 42.853 T 11-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 AL543_10690 5cab817c0dcd78540f6ec10395b83dc8 233 Gene3D G3DSA:3.40.50.790 68 159 1.1E-79 T 11-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich AL543_10690 5cab817c0dcd78540f6ec10395b83dc8 233 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 7.7E-51 T 11-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein AL543_10690 5cab817c0dcd78540f6ec10395b83dc8 233 Gene3D G3DSA:3.30.190.20 21 225 1.1E-79 T 11-10-2018 AL543_10690 5cab817c0dcd78540f6ec10395b83dc8 233 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 11-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_10690 5cab817c0dcd78540f6ec10395b83dc8 233 PIRSF PIRSF002155 1 227 1.0E-77 T 11-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_10690 5cab817c0dcd78540f6ec10395b83dc8 233 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 8.5E-106 T 11-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 AL543_10690 5cab817c0dcd78540f6ec10395b83dc8 233 SUPERFAMILY SSF56808 6 226 8.24E-82 T 11-10-2018 IPR023674 Ribosomal protein L1-like AL543_17305 1de04775a99c29a5ea11e3d096603b91 382 Pfam PF12698 ABC-2 family transporter protein 20 368 3.7E-43 T 11-10-2018 AL543_17305 1de04775a99c29a5ea11e3d096603b91 382 Gene3D G3DSA:3.40.1710.10 40 119 2.9E-5 T 11-10-2018 AL543_17625 e052e133bf72776d7ff0d5bfb2d88633 566 SUPERFAMILY SSF161098 5 273 3.71E-22 T 11-10-2018 IPR035906 MetI-like superfamily AL543_17625 e052e133bf72776d7ff0d5bfb2d88633 566 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 368 536 1.1E-9 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL543_17625 e052e133bf72776d7ff0d5bfb2d88633 566 Gene3D G3DSA:1.10.3720.10 297 546 6.8E-23 T 11-10-2018 IPR035906 MetI-like superfamily AL543_17625 e052e133bf72776d7ff0d5bfb2d88633 566 SUPERFAMILY SSF161098 300 538 5.23E-26 T 11-10-2018 IPR035906 MetI-like superfamily AL543_17625 e052e133bf72776d7ff0d5bfb2d88633 566 Gene3D G3DSA:1.10.3720.10 4 279 3.7E-20 T 11-10-2018 IPR035906 MetI-like superfamily AL543_05645 4b4aa16e169aa5bd54da8490c3b86d39 183 SUPERFAMILY SSF54364 16 90 6.93E-26 T 11-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AL543_05645 4b4aa16e169aa5bd54da8490c3b86d39 183 Gene3D G3DSA:3.30.110.10 88 183 7.0E-38 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 AL543_05645 4b4aa16e169aa5bd54da8490c3b86d39 183 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 19 183 4.5E-71 T 11-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AL543_05645 4b4aa16e169aa5bd54da8490c3b86d39 183 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 95 181 1.1E-35 T 11-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 AL543_05645 4b4aa16e169aa5bd54da8490c3b86d39 183 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 12 183 29.77 T 11-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AL543_05645 4b4aa16e169aa5bd54da8490c3b86d39 183 Gene3D G3DSA:3.10.20.80 12 87 2.0E-29 T 11-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AL543_05645 4b4aa16e169aa5bd54da8490c3b86d39 183 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 18 88 3.5E-28 T 11-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AL543_05645 4b4aa16e169aa5bd54da8490c3b86d39 183 ProSitePatterns PS00938 Initiation factor 3 signature. 70 83 - T 11-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 AL543_05645 4b4aa16e169aa5bd54da8490c3b86d39 183 SUPERFAMILY SSF55200 95 183 2.62E-33 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 AL543_14475 ec54df58e45f67b60bb80976cc1060d6 290 Pfam PF12852 Cupin 3 173 1.5E-34 T 11-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain AL543_14475 ec54df58e45f67b60bb80976cc1060d6 290 Pfam PF12833 Helix-turn-helix domain 211 288 2.4E-15 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL543_14475 ec54df58e45f67b60bb80976cc1060d6 290 SUPERFAMILY SSF51215 25 80 8.63E-5 T 11-10-2018 IPR037923 Transcription regulator HTH-like AL543_14475 ec54df58e45f67b60bb80976cc1060d6 290 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 256 271 5.6E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL543_14475 ec54df58e45f67b60bb80976cc1060d6 290 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 271 287 5.6E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL543_14475 ec54df58e45f67b60bb80976cc1060d6 290 Gene3D G3DSA:1.10.10.60 185 290 9.2E-24 T 11-10-2018 AL543_14475 ec54df58e45f67b60bb80976cc1060d6 290 SMART SM00342 205 287 1.2E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL543_14475 ec54df58e45f67b60bb80976cc1060d6 290 SUPERFAMILY SSF46689 188 238 2.42E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_14475 ec54df58e45f67b60bb80976cc1060d6 290 SUPERFAMILY SSF46689 241 289 4.48E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_03615 664f759f2c5b7c29470e50ce52bf4d52 911 Gene3D G3DSA:2.60.40.290 21 157 1.0E-13 T 11-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 AL543_03615 664f759f2c5b7c29470e50ce52bf4d52 911 Pfam PF03174 Chitobiase/beta-hexosaminidase C-terminal domain 837 906 2.6E-22 T 11-10-2018 IPR004867 Chitobiase C-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 AL543_03615 664f759f2c5b7c29470e50ce52bf4d52 911 SUPERFAMILY SSF81296 799 907 4.2E-23 T 11-10-2018 IPR014756 Immunoglobulin E-set AL543_03615 664f759f2c5b7c29470e50ce52bf4d52 911 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 345 786 4.2E-76 T 11-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 AL543_03615 664f759f2c5b7c29470e50ce52bf4d52 911 Gene3D G3DSA:2.60.40.10 845 909 1.6E-20 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL543_03615 664f759f2c5b7c29470e50ce52bf4d52 911 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 200 321 9.7E-17 T 11-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal AL543_03615 664f759f2c5b7c29470e50ce52bf4d52 911 SUPERFAMILY SSF51445 345 786 4.21E-96 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AL543_03615 664f759f2c5b7c29470e50ce52bf4d52 911 Pfam PF03173 Putative carbohydrate binding domain 41 154 2.6E-10 T 11-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 AL543_03615 664f759f2c5b7c29470e50ce52bf4d52 911 SMART SM01081 21 183 9.8E-8 T 11-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 AL543_03615 664f759f2c5b7c29470e50ce52bf4d52 911 Gene3D G3DSA:3.30.379.10 187 326 4.0E-26 T 11-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 AL543_03615 664f759f2c5b7c29470e50ce52bf4d52 911 SUPERFAMILY SSF49384 17 185 4.39E-28 T 11-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 AL543_03615 664f759f2c5b7c29470e50ce52bf4d52 911 SUPERFAMILY SSF55545 198 344 3.79E-20 T 11-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 AL543_03615 664f759f2c5b7c29470e50ce52bf4d52 911 PRINTS PR00738 Glycosyl hydrolase family 20 signature 769 786 9.7E-14 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL543_03615 664f759f2c5b7c29470e50ce52bf4d52 911 PRINTS PR00738 Glycosyl hydrolase family 20 signature 368 389 9.7E-14 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL543_03615 664f759f2c5b7c29470e50ce52bf4d52 911 PRINTS PR00738 Glycosyl hydrolase family 20 signature 294 314 9.7E-14 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL543_03615 664f759f2c5b7c29470e50ce52bf4d52 911 PRINTS PR00738 Glycosyl hydrolase family 20 signature 751 767 9.7E-14 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL543_00680 3b5cd2e1c890c6c25bbbe7cd3c89dc57 92 Gene3D G3DSA:3.10.50.40 2 92 5.0E-32 T 11-10-2018 AL543_00680 3b5cd2e1c890c6c25bbbe7cd3c89dc57 92 Pfam PF13616 PPIC-type PPIASE domain 14 89 5.1E-22 T 11-10-2018 AL543_00680 3b5cd2e1c890c6c25bbbe7cd3c89dc57 92 SUPERFAMILY SSF54534 7 90 1.5E-24 T 11-10-2018 AL543_17070 5b37503ac61f7b737c6434d25ca4b781 724 Gene3D G3DSA:1.10.420.20 191 397 2.8E-219 T 11-10-2018 AL543_17070 5b37503ac61f7b737c6434d25ca4b781 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 26 48 2.8E-54 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AL543_17070 5b37503ac61f7b737c6434d25ca4b781 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 478 504 2.8E-54 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AL543_17070 5b37503ac61f7b737c6434d25ca4b781 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 67 92 2.8E-54 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AL543_17070 5b37503ac61f7b737c6434d25ca4b781 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 267 290 2.8E-54 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AL543_17070 5b37503ac61f7b737c6434d25ca4b781 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 52 65 2.8E-54 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AL543_17070 5b37503ac61f7b737c6434d25ca4b781 724 ProSitePatterns PS00436 Peroxidases active site signature. 90 101 - T 11-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 AL543_17070 5b37503ac61f7b737c6434d25ca4b781 724 Pfam PF00141 Peroxidase 405 698 1.4E-34 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AL543_17070 5b37503ac61f7b737c6434d25ca4b781 724 Pfam PF00141 Peroxidase 70 398 7.2E-52 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AL543_17070 5b37503ac61f7b737c6434d25ca4b781 724 SUPERFAMILY SSF48113 432 723 3.68E-114 T 11-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 AL543_17070 5b37503ac61f7b737c6434d25ca4b781 724 Hamap MF_01961 Catalase-peroxidase [katG]. 7 724 40.387 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AL543_17070 5b37503ac61f7b737c6434d25ca4b781 724 Gene3D G3DSA:1.10.520.10 433 723 8.9E-153 T 11-10-2018 AL543_17070 5b37503ac61f7b737c6434d25ca4b781 724 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 11 724 0.0 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AL543_17070 5b37503ac61f7b737c6434d25ca4b781 724 Gene3D G3DSA:1.10.520.10 28 432 2.8E-219 T 11-10-2018 AL543_17070 5b37503ac61f7b737c6434d25ca4b781 724 Gene3D G3DSA:1.10.420.10 578 699 8.9E-153 T 11-10-2018 AL543_17070 5b37503ac61f7b737c6434d25ca4b781 724 PRINTS PR00458 Haem peroxidase superfamily signature 318 333 1.0E-18 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AL543_17070 5b37503ac61f7b737c6434d25ca4b781 724 PRINTS PR00458 Haem peroxidase superfamily signature 168 180 1.0E-18 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AL543_17070 5b37503ac61f7b737c6434d25ca4b781 724 PRINTS PR00458 Haem peroxidase superfamily signature 90 104 1.0E-18 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AL543_17070 5b37503ac61f7b737c6434d25ca4b781 724 PRINTS PR00458 Haem peroxidase superfamily signature 259 274 1.0E-18 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AL543_17070 5b37503ac61f7b737c6434d25ca4b781 724 PRINTS PR00458 Haem peroxidase superfamily signature 150 167 1.0E-18 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AL543_17070 5b37503ac61f7b737c6434d25ca4b781 724 SUPERFAMILY SSF48113 18 431 1.77E-154 T 11-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 AL543_00460 88fb51629f727b3b747132de9ca7bbdd 259 Pfam PF00005 ABC transporter 21 170 3.4E-24 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_00460 88fb51629f727b3b747132de9ca7bbdd 259 SUPERFAMILY SSF52540 6 232 7.25E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_00460 88fb51629f727b3b747132de9ca7bbdd 259 Gene3D G3DSA:3.40.50.300 2 258 1.2E-63 T 11-10-2018 AL543_00460 88fb51629f727b3b747132de9ca7bbdd 259 SMART SM00382 30 219 4.4E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_04120 67c6a7279c373c6c4189e7eacc7e0f33 339 SUPERFAMILY SSF53850 27 329 2.37E-61 T 11-10-2018 AL543_04120 67c6a7279c373c6c4189e7eacc7e0f33 339 Gene3D G3DSA:3.40.190.10 134 314 2.9E-77 T 11-10-2018 AL543_04120 67c6a7279c373c6c4189e7eacc7e0f33 339 PIRSF PIRSF002825 10 332 1.1E-78 T 11-10-2018 IPR026045 Ferric binding protein AL543_04120 67c6a7279c373c6c4189e7eacc7e0f33 339 TIGRFAM TIGR03261 phnS2: putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein 11 336 1.8E-150 T 11-10-2018 IPR017663 ABC transport system, 1-aminoethylphosphonate-binding protein, putative AL543_04120 67c6a7279c373c6c4189e7eacc7e0f33 339 Gene3D G3DSA:3.40.190.10 33 300 2.9E-77 T 11-10-2018 AL543_04120 67c6a7279c373c6c4189e7eacc7e0f33 339 Pfam PF13343 Bacterial extracellular solute-binding protein 78 300 1.4E-25 T 11-10-2018 AL543_09200 a25e801af125acc84abffc941850cab6 295 SUPERFAMILY SSF103481 35 131 1.26E-5 T 11-10-2018 AL543_09200 a25e801af125acc84abffc941850cab6 295 SUPERFAMILY SSF103481 183 277 1.19E-6 T 11-10-2018 AL543_09200 a25e801af125acc84abffc941850cab6 295 Pfam PF00892 EamA-like transporter family 139 276 4.5E-7 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL543_09200 a25e801af125acc84abffc941850cab6 295 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 274 1.2E-72 T 11-10-2018 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 AL543_06190 f7c2582f0297aea3385c96d2ba838885 367 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 55 93 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AL543_06190 f7c2582f0297aea3385c96d2ba838885 367 PIRSF PIRSF006769 3 366 2.2E-122 T 11-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 AL543_06190 f7c2582f0297aea3385c96d2ba838885 367 SUPERFAMILY SSF53927 8 150 2.63E-46 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AL543_06190 f7c2582f0297aea3385c96d2ba838885 367 Gene3D G3DSA:3.40.140.10 3 140 1.0E-43 T 11-10-2018 AL543_06190 f7c2582f0297aea3385c96d2ba838885 367 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 12 358 2.1E-129 T 11-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 AL543_06190 f7c2582f0297aea3385c96d2ba838885 367 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 151 361 5.7E-58 T 11-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 AL543_06190 f7c2582f0297aea3385c96d2ba838885 367 SUPERFAMILY SSF53597 149 360 6.87E-55 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AL543_06190 f7c2582f0297aea3385c96d2ba838885 367 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 8 104 1.1E-18 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain AL543_06190 f7c2582f0297aea3385c96d2ba838885 367 Pfam PF01872 RibD C-terminal domain 152 356 1.2E-48 T 11-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AL543_06190 f7c2582f0297aea3385c96d2ba838885 367 Gene3D G3DSA:3.40.430.10 141 366 1.5E-66 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AL543_05395 af078c87a345d66158021b64b71e336a 154 SMART SM01022 30 153 1.8E-41 T 11-10-2018 IPR007374 ASCH domain AL543_05395 af078c87a345d66158021b64b71e336a 154 PIRSF PIRSF021320 4 154 6.9E-43 T 11-10-2018 IPR009326 Protein of unknown function DUF984 AL543_05395 af078c87a345d66158021b64b71e336a 154 Pfam PF04266 ASCH domain 42 153 1.1E-24 T 11-10-2018 IPR007374 ASCH domain AL543_05395 af078c87a345d66158021b64b71e336a 154 Gene3D G3DSA:3.10.400.10 1 154 8.4E-61 T 11-10-2018 AL543_05395 af078c87a345d66158021b64b71e336a 154 SUPERFAMILY SSF88697 5 153 1.12E-52 T 11-10-2018 IPR015947 PUA-like superfamily AL543_05525 af078c87a345d66158021b64b71e336a 154 SMART SM01022 30 153 1.8E-41 T 11-10-2018 IPR007374 ASCH domain AL543_05525 af078c87a345d66158021b64b71e336a 154 PIRSF PIRSF021320 4 154 6.9E-43 T 11-10-2018 IPR009326 Protein of unknown function DUF984 AL543_05525 af078c87a345d66158021b64b71e336a 154 Pfam PF04266 ASCH domain 42 153 1.1E-24 T 11-10-2018 IPR007374 ASCH domain AL543_05525 af078c87a345d66158021b64b71e336a 154 Gene3D G3DSA:3.10.400.10 1 154 8.4E-61 T 11-10-2018 AL543_05525 af078c87a345d66158021b64b71e336a 154 SUPERFAMILY SSF88697 5 153 1.12E-52 T 11-10-2018 IPR015947 PUA-like superfamily AL543_15485 516598c51826819f8fb8a63b08b61826 474 SMART SM00479 8 201 0.0079 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL543_15485 516598c51826819f8fb8a63b08b61826 474 Gene3D G3DSA:1.20.1280.70 358 419 4.8E-26 T 11-10-2018 AL543_15485 516598c51826819f8fb8a63b08b61826 474 Gene3D G3DSA:3.30.420.10 1 199 1.4E-71 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AL543_15485 516598c51826819f8fb8a63b08b61826 474 Gene3D G3DSA:2.30.30.450 212 352 7.3E-55 T 11-10-2018 IPR038649 Exonuclease I, SH3-like domain superfamily AL543_15485 516598c51826819f8fb8a63b08b61826 474 SUPERFAMILY SSF53098 7 472 5.54E-134 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_15485 516598c51826819f8fb8a63b08b61826 474 PIRSF PIRSF000977 1 474 4.5E-198 T 11-10-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 AL543_15485 516598c51826819f8fb8a63b08b61826 474 Pfam PF00929 Exonuclease 11 191 1.9E-21 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL543_15485 516598c51826819f8fb8a63b08b61826 474 Pfam PF08411 Exonuclease C-terminal 210 470 2.7E-104 T 11-10-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 AL543_10960 98ef64176afebab5943b3be1ce1c9e5e 375 SUPERFAMILY SSF51419 22 248 4.58E-71 T 11-10-2018 IPR029066 PLP-binding barrel AL543_10960 98ef64176afebab5943b3be1ce1c9e5e 375 PRINTS PR00992 Alanine racemase signature 134 146 1.8E-71 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL543_10960 98ef64176afebab5943b3be1ce1c9e5e 375 PRINTS PR00992 Alanine racemase signature 169 180 1.8E-71 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL543_10960 98ef64176afebab5943b3be1ce1c9e5e 375 PRINTS PR00992 Alanine racemase signature 74 92 1.8E-71 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL543_10960 98ef64176afebab5943b3be1ce1c9e5e 375 PRINTS PR00992 Alanine racemase signature 280 295 1.8E-71 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL543_10960 98ef64176afebab5943b3be1ce1c9e5e 375 PRINTS PR00992 Alanine racemase signature 206 233 1.8E-71 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL543_10960 98ef64176afebab5943b3be1ce1c9e5e 375 PRINTS PR00992 Alanine racemase signature 301 318 1.8E-71 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL543_10960 98ef64176afebab5943b3be1ce1c9e5e 375 PRINTS PR00992 Alanine racemase signature 353 366 1.8E-71 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL543_10960 98ef64176afebab5943b3be1ce1c9e5e 375 PRINTS PR00992 Alanine racemase signature 40 56 1.8E-71 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL543_10960 98ef64176afebab5943b3be1ce1c9e5e 375 PRINTS PR00992 Alanine racemase signature 263 278 1.8E-71 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL543_10960 98ef64176afebab5943b3be1ce1c9e5e 375 Gene3D G3DSA:3.20.20.10 24 231 1.2E-131 T 11-10-2018 IPR029066 PLP-binding barrel AL543_10960 98ef64176afebab5943b3be1ce1c9e5e 375 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 45 55 - T 11-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL543_10960 98ef64176afebab5943b3be1ce1c9e5e 375 Hamap MF_01201 Alanine racemase. 15 371 35.502 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL543_10960 98ef64176afebab5943b3be1ce1c9e5e 375 SUPERFAMILY SSF50621 241 371 2.69E-46 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AL543_10960 98ef64176afebab5943b3be1ce1c9e5e 375 SMART SM01005 247 371 4.0E-64 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL543_10960 98ef64176afebab5943b3be1ce1c9e5e 375 Gene3D G3DSA:2.40.37.10 22 366 1.2E-131 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AL543_10960 98ef64176afebab5943b3be1ce1c9e5e 375 Pfam PF00842 Alanine racemase, C-terminal domain 247 370 8.9E-42 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL543_10960 98ef64176afebab5943b3be1ce1c9e5e 375 Pfam PF01168 Alanine racemase, N-terminal domain 22 233 3.5E-71 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL543_10960 98ef64176afebab5943b3be1ce1c9e5e 375 TIGRFAM TIGR00492 alr: alanine racemase 17 370 8.7E-130 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL543_13050 df5ebd966adf8f08fd11963697173532 487 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 454 5.8E-194 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 AL543_13050 df5ebd966adf8f08fd11963697173532 487 SUPERFAMILY SSF54631 95 203 3.54E-25 T 11-10-2018 AL543_13050 df5ebd966adf8f08fd11963697173532 487 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 82.563 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 AL543_13050 df5ebd966adf8f08fd11963697173532 487 SUPERFAMILY SSF51412 1 477 2.49E-122 T 11-10-2018 AL543_13050 df5ebd966adf8f08fd11963697173532 487 Pfam PF00571 CBS domain 95 140 2.3E-10 T 11-10-2018 IPR000644 CBS domain AL543_13050 df5ebd966adf8f08fd11963697173532 487 Pfam PF00571 CBS domain 149 201 2.7E-4 T 11-10-2018 IPR000644 CBS domain AL543_13050 df5ebd966adf8f08fd11963697173532 487 SMART SM00116 96 144 2.2E-10 T 11-10-2018 IPR000644 CBS domain AL543_13050 df5ebd966adf8f08fd11963697173532 487 SMART SM00116 158 206 6.2E-6 T 11-10-2018 IPR000644 CBS domain AL543_13050 df5ebd966adf8f08fd11963697173532 487 SMART SM01240 7 473 0.0 T 11-10-2018 AL543_13050 df5ebd966adf8f08fd11963697173532 487 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 7.3E-161 T 11-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 AL543_13050 df5ebd966adf8f08fd11963697173532 487 PIRSF PIRSF000130 1 487 4.6E-198 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 AL543_13050 df5ebd966adf8f08fd11963697173532 487 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 11-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 AL543_13050 df5ebd966adf8f08fd11963697173532 487 Gene3D G3DSA:3.20.20.70 1 486 2.0E-208 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_12885 888b50bd91ac4659ec08a148e9f47199 201 Gene3D G3DSA:3.40.30.10 1 197 2.6E-71 T 11-10-2018 AL543_12885 888b50bd91ac4659ec08a148e9f47199 201 PIRSF PIRSF000239 1 200 1.0E-58 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AL543_12885 888b50bd91ac4659ec08a148e9f47199 201 SUPERFAMILY SSF52833 1 196 2.84E-66 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL543_12885 888b50bd91ac4659ec08a148e9f47199 201 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 193 1.4E-7 T 11-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AL543_12885 888b50bd91ac4659ec08a148e9f47199 201 Pfam PF00578 AhpC/TSA family 4 139 1.1E-33 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AL543_15740 9fe55759863dafa3a65cd681260b50e5 216 SMART SM00421 152 209 5.0E-22 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_15740 9fe55759863dafa3a65cd681260b50e5 216 Pfam PF00072 Response regulator receiver domain 11 123 3.8E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_15740 9fe55759863dafa3a65cd681260b50e5 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 169 196 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_15740 9fe55759863dafa3a65cd681260b50e5 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 209 1.2E-19 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_15740 9fe55759863dafa3a65cd681260b50e5 216 Gene3D G3DSA:3.40.50.12740 9 215 3.1E-66 T 11-10-2018 AL543_15740 9fe55759863dafa3a65cd681260b50e5 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 5.2E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_15740 9fe55759863dafa3a65cd681260b50e5 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 5.2E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_15740 9fe55759863dafa3a65cd681260b50e5 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 5.2E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_15740 9fe55759863dafa3a65cd681260b50e5 216 SUPERFAMILY SSF52172 8 138 7.68E-36 T 11-10-2018 IPR011006 CheY-like superfamily AL543_15740 9fe55759863dafa3a65cd681260b50e5 216 SUPERFAMILY SSF46894 145 215 2.07E-21 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL543_15740 9fe55759863dafa3a65cd681260b50e5 216 SMART SM00448 9 122 1.7E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_08515 4fd1d8c54026ecc1cedd8b83fdbc7528 304 PRINTS PR00810 Bacterial general secretion pathway protein C signature 258 268 4.1E-5 T 11-10-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 AL543_08515 4fd1d8c54026ecc1cedd8b83fdbc7528 304 PRINTS PR00810 Bacterial general secretion pathway protein C signature 109 118 4.1E-5 T 11-10-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 AL543_08515 4fd1d8c54026ecc1cedd8b83fdbc7528 304 Gene3D G3DSA:2.30.42.10 201 304 1.8E-28 T 11-10-2018 AL543_08515 4fd1d8c54026ecc1cedd8b83fdbc7528 304 Gene3D G3DSA:2.30.30.830 106 173 3.3E-28 T 11-10-2018 AL543_08515 4fd1d8c54026ecc1cedd8b83fdbc7528 304 SUPERFAMILY SSF50156 209 303 6.56E-18 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AL543_08515 4fd1d8c54026ecc1cedd8b83fdbc7528 304 ProSitePatterns PS01141 Bacterial type II secretion system protein C signature. 242 268 - T 11-10-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 AL543_08515 4fd1d8c54026ecc1cedd8b83fdbc7528 304 Pfam PF11356 Type II secretion system protein C 33 172 7.8E-41 T 11-10-2018 IPR024961 Type II secretion system protein C, N-terminal AL543_08515 4fd1d8c54026ecc1cedd8b83fdbc7528 304 TIGRFAM TIGR01713 typeII_sec_gspC: type II secretion system protein C 30 304 1.7E-101 T 11-10-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 AL543_17505 84940c3c3f2618a1de324c20bc3302b9 358 Gene3D G3DSA:1.10.287.470 94 155 2.3E-59 T 11-10-2018 AL543_17505 84940c3c3f2618a1de324c20bc3302b9 358 SUPERFAMILY SSF111369 49 265 3.14E-29 T 11-10-2018 AL543_17505 84940c3c3f2618a1de324c20bc3302b9 358 Gene3D G3DSA:2.40.420.20 273 342 2.3E-59 T 11-10-2018 AL543_17505 84940c3c3f2618a1de324c20bc3302b9 358 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 35 344 6.8E-63 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL543_17505 84940c3c3f2618a1de324c20bc3302b9 358 Gene3D G3DSA:2.40.50.100 59 189 2.3E-59 T 11-10-2018 AL543_17505 84940c3c3f2618a1de324c20bc3302b9 358 Gene3D G3DSA:2.40.30.170 47 272 2.3E-59 T 11-10-2018 AL543_17505 84940c3c3f2618a1de324c20bc3302b9 358 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 262 7.4E-26 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL543_03310 a45b60a650a5ffcda35f9c03a6574965 360 SUPERFAMILY SSF53901 7 325 9.98E-64 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL543_03310 a45b60a650a5ffcda35f9c03a6574965 360 Gene3D G3DSA:3.40.47.10 1 360 3.6E-159 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL543_03310 a45b60a650a5ffcda35f9c03a6574965 360 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 5 324 1.3E-107 T 11-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AL543_03310 a45b60a650a5ffcda35f9c03a6574965 360 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 235 324 7.8E-35 T 11-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AL543_03310 a45b60a650a5ffcda35f9c03a6574965 360 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 4 324 63.351 T 11-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AL543_03310 a45b60a650a5ffcda35f9c03a6574965 360 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 184 6.0E-28 T 11-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AL543_20035 03349223a4ac583db8679e745a6700be 95 Pfam PF09904 Winged helix-turn helix 4 91 4.3E-39 T 11-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 AL543_20035 03349223a4ac583db8679e745a6700be 95 Gene3D G3DSA:1.10.10.10 2 95 6.9E-38 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_20035 03349223a4ac583db8679e745a6700be 95 PIRSF PIRSF037266 1 94 6.0E-42 T 11-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 AL543_02770 c84c942fd05314a449b9404c834b62f5 647 Pfam PF17149 Periplasmic sensor domain found in signal transduction proteins 45 151 2.0E-40 T 11-10-2018 IPR033414 Periplasmic sensor domain AL543_02770 c84c942fd05314a449b9404c834b62f5 647 Gene3D G3DSA:1.10.287.130 376 478 8.5E-19 T 11-10-2018 AL543_02770 c84c942fd05314a449b9404c834b62f5 647 SMART SM00387 526 638 7.2E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_02770 c84c942fd05314a449b9404c834b62f5 647 SUPERFAMILY SSF55874 485 636 1.96E-32 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_02770 c84c942fd05314a449b9404c834b62f5 647 SUPERFAMILY SSF55785 238 351 2.84E-6 T 11-10-2018 IPR035965 PAS domain superfamily AL543_02770 c84c942fd05314a449b9404c834b62f5 647 Gene3D G3DSA:3.30.450.20 238 351 3.2E-7 T 11-10-2018 AL543_02770 c84c942fd05314a449b9404c834b62f5 647 Gene3D G3DSA:3.30.565.10 483 638 6.1E-31 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_02770 c84c942fd05314a449b9404c834b62f5 647 SUPERFAMILY SSF47384 396 443 2.94E-5 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL543_02770 c84c942fd05314a449b9404c834b62f5 647 PRINTS PR00344 Bacterial sensor protein C-terminal signature 584 594 4.1E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_02770 c84c942fd05314a449b9404c834b62f5 647 PRINTS PR00344 Bacterial sensor protein C-terminal signature 597 615 4.1E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_02770 c84c942fd05314a449b9404c834b62f5 647 PRINTS PR00344 Bacterial sensor protein C-terminal signature 566 580 4.1E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_02770 c84c942fd05314a449b9404c834b62f5 647 PRINTS PR00344 Bacterial sensor protein C-terminal signature 622 635 4.1E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_02770 c84c942fd05314a449b9404c834b62f5 647 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 531 636 2.0E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_08320 80de3e0ee1fa13eaaaf1ae38c4a39348 483 PRINTS PR00149 Fumarate lyase superfamily signature 284 311 5.2E-25 T 11-10-2018 IPR000362 Fumarate lyase family AL543_08320 80de3e0ee1fa13eaaaf1ae38c4a39348 483 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 5.2E-25 T 11-10-2018 IPR000362 Fumarate lyase family AL543_08320 80de3e0ee1fa13eaaaf1ae38c4a39348 483 PRINTS PR00149 Fumarate lyase superfamily signature 330 346 5.2E-25 T 11-10-2018 IPR000362 Fumarate lyase family AL543_08320 80de3e0ee1fa13eaaaf1ae38c4a39348 483 PRINTS PR00149 Fumarate lyase superfamily signature 193 211 5.2E-25 T 11-10-2018 IPR000362 Fumarate lyase family AL543_08320 80de3e0ee1fa13eaaaf1ae38c4a39348 483 Pfam PF00206 Lyase 23 355 1.4E-101 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal AL543_08320 80de3e0ee1fa13eaaaf1ae38c4a39348 483 SUPERFAMILY SSF48557 14 468 1.47E-144 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 AL543_08320 80de3e0ee1fa13eaaaf1ae38c4a39348 483 Gene3D G3DSA:1.10.40.30 421 470 1.1E-29 T 11-10-2018 AL543_08320 80de3e0ee1fa13eaaaf1ae38c4a39348 483 ProSitePatterns PS00163 Fumarate lyases signature. 330 339 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AL543_08320 80de3e0ee1fa13eaaaf1ae38c4a39348 483 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 16 482 2.5E-255 T 11-10-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 AL543_08320 80de3e0ee1fa13eaaaf1ae38c4a39348 483 Gene3D G3DSA:1.10.275.10 16 152 2.5E-58 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal AL543_08320 80de3e0ee1fa13eaaaf1ae38c4a39348 483 Gene3D G3DSA:1.20.200.10 153 420 1.4E-112 T 11-10-2018 AL543_08320 80de3e0ee1fa13eaaaf1ae38c4a39348 483 Pfam PF10415 Fumarase C C-terminus 421 474 3.1E-18 T 11-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AL543_00945 1ef6058eb3230572128a6ebddc1118ad 197 SUPERFAMILY SSF52218 1 165 2.85E-30 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL543_00945 1ef6058eb3230572128a6ebddc1118ad 197 Gene3D G3DSA:3.40.50.360 1 189 3.8E-33 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL543_00945 1ef6058eb3230572128a6ebddc1118ad 197 Pfam PF03358 NADPH-dependent FMN reductase 1 140 1.4E-24 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AL543_09720 e8a920a672b3b4eb25176617ab5f9eee 215 Pfam PF03006 Haemolysin-III related 8 205 1.1E-37 T 11-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 AL543_09720 e8a920a672b3b4eb25176617ab5f9eee 215 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 11 212 1.9E-70 T 11-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 AL543_07555 310b3547ca2d8748963e120b5516f845 238 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_07555 310b3547ca2d8748963e120b5516f845 238 SMART SM00382 24 207 4.5E-18 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_07555 310b3547ca2d8748963e120b5516f845 238 Pfam PF00005 ABC transporter 19 157 6.2E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_07555 310b3547ca2d8748963e120b5516f845 238 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 2 214 1.7E-118 T 11-10-2018 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0016021|GO:0042626|GO:0071934 AL543_07555 310b3547ca2d8748963e120b5516f845 238 SUPERFAMILY SSF52540 1 230 2.08E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_07555 310b3547ca2d8748963e120b5516f845 238 Gene3D G3DSA:3.40.50.300 1 238 5.1E-62 T 11-10-2018 AL543_08225 d92393b3886c0d1c80f6e6f5b1d5c203 183 Gene3D G3DSA:3.30.70.1070 102 182 4.5E-27 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AL543_08225 d92393b3886c0d1c80f6e6f5b1d5c203 183 Pfam PF05036 Sporulation related domain 109 178 1.7E-13 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 AL543_08225 d92393b3886c0d1c80f6e6f5b1d5c203 183 SUPERFAMILY SSF110997 108 179 1.57E-16 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AL543_16605 4e026cc690cb4be51ce30a753d47ec7f 250 SMART SM00419 187 235 1.1E-14 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL543_16605 4e026cc690cb4be51ce30a753d47ec7f 250 SMART SM00100 30 151 2.1E-20 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AL543_16605 4e026cc690cb4be51ce30a753d47ec7f 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 2.6E-11 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL543_16605 4e026cc690cb4be51ce30a753d47ec7f 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 2.6E-11 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL543_16605 4e026cc690cb4be51ce30a753d47ec7f 250 ProSitePatterns PS00042 Crp-type HTH domain signature. 195 218 - T 11-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 AL543_16605 4e026cc690cb4be51ce30a753d47ec7f 250 Gene3D G3DSA:2.60.120.10 43 164 2.3E-49 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL543_16605 4e026cc690cb4be51ce30a753d47ec7f 250 SUPERFAMILY SSF46785 165 244 4.43E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_16605 4e026cc690cb4be51ce30a753d47ec7f 250 SUPERFAMILY SSF51206 23 162 2.49E-31 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like AL543_16605 4e026cc690cb4be51ce30a753d47ec7f 250 Gene3D G3DSA:1.10.10.10 165 250 1.7E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_16605 4e026cc690cb4be51ce30a753d47ec7f 250 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 1.9E-15 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AL543_16605 4e026cc690cb4be51ce30a753d47ec7f 250 Pfam PF13545 Crp-like helix-turn-helix domain 168 241 1.6E-16 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL543_10230 593b3b5490b88925e22580af21a17b98 357 Gene3D G3DSA:3.40.50.2000 166 349 2.4E-41 T 11-10-2018 AL543_10230 593b3b5490b88925e22580af21a17b98 357 Gene3D G3DSA:3.40.50.2000 7 158 2.3E-26 T 11-10-2018 AL543_10230 593b3b5490b88925e22580af21a17b98 357 SUPERFAMILY SSF53756 12 345 2.3E-88 T 11-10-2018 AL543_10230 593b3b5490b88925e22580af21a17b98 357 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 77 306 1.5E-54 T 11-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 AL543_03845 ec351cb7ec65e16ca5b3cc48fdb04be0 377 SUPERFAMILY SSF56059 121 312 2.62E-8 T 11-10-2018 AL543_08985 f8b1690480cb25820e0a4a5687a957fe 938 SUPERFAMILY SSF56672 531 938 8.34E-160 T 11-10-2018 AL543_08985 f8b1690480cb25820e0a4a5687a957fe 938 TIGRFAM TIGR00593 pola: DNA polymerase I 9 938 2.7E-285 T 11-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL543_08985 f8b1690480cb25820e0a4a5687a957fe 938 Gene3D G3DSA:1.10.150.20 718 861 2.0E-114 T 11-10-2018 AL543_08985 f8b1690480cb25820e0a4a5687a957fe 938 SMART SM00474 339 526 6.4E-40 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AL543_08985 f8b1690480cb25820e0a4a5687a957fe 938 Pfam PF00476 DNA polymerase family A 561 935 2.5E-157 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL543_08985 f8b1690480cb25820e0a4a5687a957fe 938 SUPERFAMILY SSF47807 171 290 9.12E-32 T 11-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily AL543_08985 f8b1690480cb25820e0a4a5687a957fe 938 Pfam PF01612 3'-5' exonuclease 339 525 1.2E-38 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AL543_08985 f8b1690480cb25820e0a4a5687a957fe 938 SUPERFAMILY SSF53098 342 527 3.48E-54 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_08985 f8b1690480cb25820e0a4a5687a957fe 938 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 271 3.4E-30 T 11-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 AL543_08985 f8b1690480cb25820e0a4a5687a957fe 938 ProSitePatterns PS00447 DNA polymerase family A signature. 763 782 - T 11-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL543_08985 f8b1690480cb25820e0a4a5687a957fe 938 PRINTS PR00868 DNA-polymerase family A (pol I) signature 664 686 2.5E-78 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL543_08985 f8b1690480cb25820e0a4a5687a957fe 938 PRINTS PR00868 DNA-polymerase family A (pol I) signature 739 752 2.5E-78 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL543_08985 f8b1690480cb25820e0a4a5687a957fe 938 PRINTS PR00868 DNA-polymerase family A (pol I) signature 687 702 2.5E-78 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL543_08985 f8b1690480cb25820e0a4a5687a957fe 938 PRINTS PR00868 DNA-polymerase family A (pol I) signature 800 811 2.5E-78 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL543_08985 f8b1690480cb25820e0a4a5687a957fe 938 PRINTS PR00868 DNA-polymerase family A (pol I) signature 854 870 2.5E-78 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL543_08985 f8b1690480cb25820e0a4a5687a957fe 938 PRINTS PR00868 DNA-polymerase family A (pol I) signature 763 788 2.5E-78 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL543_08985 f8b1690480cb25820e0a4a5687a957fe 938 PRINTS PR00868 DNA-polymerase family A (pol I) signature 822 833 2.5E-78 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL543_08985 f8b1690480cb25820e0a4a5687a957fe 938 PRINTS PR00868 DNA-polymerase family A (pol I) signature 709 732 2.5E-78 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL543_08985 f8b1690480cb25820e0a4a5687a957fe 938 PRINTS PR00868 DNA-polymerase family A (pol I) signature 885 898 2.5E-78 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL543_08985 f8b1690480cb25820e0a4a5687a957fe 938 Gene3D G3DSA:1.20.1060.10 552 667 4.3E-42 T 11-10-2018 AL543_08985 f8b1690480cb25820e0a4a5687a957fe 938 Gene3D G3DSA:3.40.50.1010 9 284 2.2E-95 T 11-10-2018 AL543_08985 f8b1690480cb25820e0a4a5687a957fe 938 Gene3D G3DSA:3.30.70.370 673 934 2.0E-114 T 11-10-2018 AL543_08985 f8b1690480cb25820e0a4a5687a957fe 938 Gene3D G3DSA:1.10.150.20 174 253 2.2E-95 T 11-10-2018 AL543_08985 f8b1690480cb25820e0a4a5687a957fe 938 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 3.9E-54 T 11-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 AL543_08985 f8b1690480cb25820e0a4a5687a957fe 938 SUPERFAMILY SSF88723 7 170 4.91E-57 T 11-10-2018 IPR029060 PIN-like domain superfamily AL543_08985 f8b1690480cb25820e0a4a5687a957fe 938 SMART SM00482 695 902 4.7E-117 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL543_08985 f8b1690480cb25820e0a4a5687a957fe 938 SMART SM00475 7 267 5.7E-126 T 11-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 AL543_08985 f8b1690480cb25820e0a4a5687a957fe 938 Gene3D G3DSA:3.30.420.10 336 551 1.1E-68 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AL543_08985 f8b1690480cb25820e0a4a5687a957fe 938 SMART SM00279 173 208 7.2E-14 T 11-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 AL543_14035 b03c6d136acff64fbbc7e7f25ad6207b 304 Gene3D G3DSA:3.40.50.720 2 303 1.7E-75 T 11-10-2018 AL543_14035 b03c6d136acff64fbbc7e7f25ad6207b 304 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 295 1.3E-101 T 11-10-2018 IPR010099 Epimerase family protein SDR39U1 AL543_14035 b03c6d136acff64fbbc7e7f25ad6207b 304 Pfam PF08338 Domain of unknown function (DUF1731) 253 299 1.4E-14 T 11-10-2018 IPR013549 Domain of unknown function DUF1731 AL543_14035 b03c6d136acff64fbbc7e7f25ad6207b 304 SUPERFAMILY SSF51735 1 293 5.04E-44 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_14035 b03c6d136acff64fbbc7e7f25ad6207b 304 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 226 3.0E-21 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AL543_19750 e619e882d64e47e91ba33b805aa0b62a 236 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL543_19750 e619e882d64e47e91ba33b805aa0b62a 236 SUPERFAMILY SSF46548 105 232 6.45E-40 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL543_19750 e619e882d64e47e91ba33b805aa0b62a 236 Gene3D G3DSA:1.10.1060.10 105 236 2.4E-56 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL543_19750 e619e882d64e47e91ba33b805aa0b62a 236 Gene3D G3DSA:3.10.20.30 1 104 2.5E-32 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AL543_19750 e619e882d64e47e91ba33b805aa0b62a 236 Pfam PF13534 4Fe-4S dicluster domain 146 219 1.4E-10 T 11-10-2018 AL543_19750 e619e882d64e47e91ba33b805aa0b62a 236 SUPERFAMILY SSF54292 1 104 1.28E-28 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AL543_19750 e619e882d64e47e91ba33b805aa0b62a 236 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 8 228 1.3E-85 T 11-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL543_19750 e619e882d64e47e91ba33b805aa0b62a 236 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 109 3.1E-29 T 11-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL543_14435 eff5c6ef891e51f0f0b6dddcba4146f7 286 SUPERFAMILY SSF54637 116 283 6.49E-59 T 11-10-2018 IPR029069 HotDog domain superfamily AL543_14435 eff5c6ef891e51f0f0b6dddcba4146f7 286 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 4.9E-95 T 11-10-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 AL543_14435 eff5c6ef891e51f0f0b6dddcba4146f7 286 Gene3D G3DSA:3.10.129.90 2 285 1.0E-107 T 11-10-2018 AL543_14435 eff5c6ef891e51f0f0b6dddcba4146f7 286 SUPERFAMILY SSF54637 5 114 3.63E-40 T 11-10-2018 IPR029069 HotDog domain superfamily AL543_14435 eff5c6ef891e51f0f0b6dddcba4146f7 286 Pfam PF13622 Thioesterase-like superfamily 33 282 7.0E-62 T 11-10-2018 AL543_10835 57033f18d4d4f71420426452f8442d5f 315 SUPERFAMILY SSF52540 10 153 1.02E-18 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_10835 57033f18d4d4f71420426452f8442d5f 315 Pfam PF01715 IPP transferase 42 287 1.2E-86 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AL543_10835 57033f18d4d4f71420426452f8442d5f 315 Gene3D G3DSA:1.10.20.140 115 186 7.7E-108 T 11-10-2018 AL543_10835 57033f18d4d4f71420426452f8442d5f 315 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 9 295 5.7E-116 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AL543_10835 57033f18d4d4f71420426452f8442d5f 315 Gene3D G3DSA:3.40.50.300 12 292 7.7E-108 T 11-10-2018 AL543_10835 57033f18d4d4f71420426452f8442d5f 315 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 8 301 30.347 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AL543_18815 190d97e773afc8bfbb9bf8cf1e8a5578 396 Gene3D G3DSA:3.90.550.10 48 263 5.2E-20 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL543_18815 190d97e773afc8bfbb9bf8cf1e8a5578 396 Pfam PF13641 Glycosyltransferase like family 2 57 272 8.7E-15 T 11-10-2018 AL543_18815 190d97e773afc8bfbb9bf8cf1e8a5578 396 SUPERFAMILY SSF53448 54 320 1.13E-28 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL543_16395 492fcb73b536a40b77b1502f5d93b202 168 SUPERFAMILY SSF50475 6 158 6.67E-44 T 11-10-2018 AL543_16395 492fcb73b536a40b77b1502f5d93b202 168 Pfam PF01613 Flavin reductase like domain 11 158 4.3E-26 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 AL543_16395 492fcb73b536a40b77b1502f5d93b202 168 Gene3D G3DSA:2.30.110.10 1 164 3.0E-41 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AL543_16395 492fcb73b536a40b77b1502f5d93b202 168 SMART SM00903 11 157 4.4E-48 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 AL543_16395 492fcb73b536a40b77b1502f5d93b202 168 TIGRFAM TIGR02296 HpaC: 4-hydroxyphenylacetate 3-monooxygenase, reductase component 7 158 7.6E-78 T 11-10-2018 IPR011982 4-hydroxyphenylacetate 3-monooxygenase, reductase component GO:0016651|GO:0042537|GO:0051287|GO:0055114 KEGG: 00740+1.5.1.36 AL543_16920 9f37a2820bb4f2cb4d44ed73ef60cdd8 606 Gene3D G3DSA:3.90.105.10 226 374 6.0E-138 T 11-10-2018 AL543_16920 9f37a2820bb4f2cb4d44ed73ef60cdd8 606 Gene3D G3DSA:2.40.340.10 527 597 6.0E-138 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL543_16920 9f37a2820bb4f2cb4d44ed73ef60cdd8 606 SUPERFAMILY SSF53218 377 522 1.7E-44 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily AL543_16920 9f37a2820bb4f2cb4d44ed73ef60cdd8 606 Gene3D G3DSA:2.20.25.120 60 92 2.2E-57 T 11-10-2018 AL543_16920 9f37a2820bb4f2cb4d44ed73ef60cdd8 606 SUPERFAMILY SSF63882 205 375 1.31E-48 T 11-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL543_16920 9f37a2820bb4f2cb4d44ed73ef60cdd8 606 SMART SM00852 380 517 4.8E-42 T 11-10-2018 IPR001453 MoaB/Mog domain AL543_16920 9f37a2820bb4f2cb4d44ed73ef60cdd8 606 SUPERFAMILY SSF52540 15 175 1.49E-24 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_16920 9f37a2820bb4f2cb4d44ed73ef60cdd8 606 Gene3D G3DSA:2.170.190.11 250 341 6.0E-138 T 11-10-2018 AL543_16920 9f37a2820bb4f2cb4d44ed73ef60cdd8 606 Pfam PF00994 Probable molybdopterin binding domain 380 517 4.3E-27 T 11-10-2018 IPR001453 MoaB/Mog domain AL543_16920 9f37a2820bb4f2cb4d44ed73ef60cdd8 606 PIRSF PIRSF036618 2 606 0.0 T 11-10-2018 IPR012182 Bifunctional molybdenum cofactor biosynthesis MobB/MoeA AL543_16920 9f37a2820bb4f2cb4d44ed73ef60cdd8 606 Pfam PF03454 MoeA C-terminal region (domain IV) 531 602 3.6E-20 T 11-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL543_16920 9f37a2820bb4f2cb4d44ed73ef60cdd8 606 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 453 486 - T 11-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 AL543_16920 9f37a2820bb4f2cb4d44ed73ef60cdd8 606 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 17 172 4.5E-42 T 11-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 AL543_16920 9f37a2820bb4f2cb4d44ed73ef60cdd8 606 Pfam PF03453 MoeA N-terminal region (domain I and II) 208 367 1.8E-41 T 11-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL543_16920 9f37a2820bb4f2cb4d44ed73ef60cdd8 606 SUPERFAMILY SSF63867 526 604 5.49E-22 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL543_16920 9f37a2820bb4f2cb4d44ed73ef60cdd8 606 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 377 513 1.2E-32 T 11-10-2018 IPR001453 MoaB/Mog domain AL543_16920 9f37a2820bb4f2cb4d44ed73ef60cdd8 606 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 17 149 3.5E-47 T 11-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 AL543_16920 9f37a2820bb4f2cb4d44ed73ef60cdd8 606 Gene3D G3DSA:3.40.980.10 225 526 6.0E-138 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily AL543_16920 9f37a2820bb4f2cb4d44ed73ef60cdd8 606 Gene3D G3DSA:3.40.50.300 17 171 2.2E-57 T 11-10-2018 AL543_01365 936148b5755d5e504594acaba619ce1a 817 Gene3D G3DSA:3.40.50.2000 475 797 8.0E-144 T 11-10-2018 AL543_01365 936148b5755d5e504594acaba619ce1a 817 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 10 812 0.0 T 11-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AL543_01365 936148b5755d5e504594acaba619ce1a 817 SUPERFAMILY SSF53756 8 815 0.0 T 11-10-2018 AL543_01365 936148b5755d5e504594acaba619ce1a 817 Gene3D G3DSA:3.40.50.2000 5 474 2.1E-193 T 11-10-2018 AL543_01365 936148b5755d5e504594acaba619ce1a 817 Pfam PF00343 Carbohydrate phosphorylase 99 812 0.0 T 11-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AL543_01365 936148b5755d5e504594acaba619ce1a 817 PIRSF PIRSF000460 1 817 8.6E-215 T 11-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AL543_01365 936148b5755d5e504594acaba619ce1a 817 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 656 668 - T 11-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AL543_06185 690b10528c10c083a99db31afb6e8add 217 SUPERFAMILY SSF63380 1 89 4.51E-25 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AL543_06185 690b10528c10c083a99db31afb6e8add 217 Gene3D G3DSA:2.40.30.20 102 205 1.1E-34 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL543_06185 690b10528c10c083a99db31afb6e8add 217 Gene3D G3DSA:2.40.30.20 1 89 7.9E-28 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL543_06185 690b10528c10c083a99db31afb6e8add 217 PIRSF PIRSF000498 1 211 8.4E-81 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL543_06185 690b10528c10c083a99db31afb6e8add 217 SUPERFAMILY SSF63380 93 196 1.28E-32 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AL543_06185 690b10528c10c083a99db31afb6e8add 217 Pfam PF00677 Lumazine binding domain 100 184 8.1E-24 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL543_06185 690b10528c10c083a99db31afb6e8add 217 Pfam PF00677 Lumazine binding domain 3 87 3.5E-21 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL543_06185 690b10528c10c083a99db31afb6e8add 217 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 201 6.1E-67 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL543_18595 b5bd09261caf4b7600c7b371c90b06b3 179 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 177 3.5E-71 T 11-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA AL543_18595 b5bd09261caf4b7600c7b371c90b06b3 179 Gene3D G3DSA:3.40.50.1820 1 178 3.1E-18 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL543_18595 b5bd09261caf4b7600c7b371c90b06b3 179 SUPERFAMILY SSF53474 2 176 1.04E-5 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL543_18595 b5bd09261caf4b7600c7b371c90b06b3 179 Hamap MF_01047 UPF0227 protein YcfP [ycfP]. 1 178 49.654 T 11-10-2018 IPR022987 Uncharacterised protein family UPF0227 AL543_04700 2a0bca41fe37c54aa4afcb16945b0a1c 380 SUPERFAMILY SSF55804 4 141 2.22E-38 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AL543_04700 2a0bca41fe37c54aa4afcb16945b0a1c 380 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 294 373 4.6E-22 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AL543_04700 2a0bca41fe37c54aa4afcb16945b0a1c 380 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 331 346 - T 11-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site AL543_04700 2a0bca41fe37c54aa4afcb16945b0a1c 380 SUPERFAMILY SSF55594 294 379 1.31E-23 T 11-10-2018 IPR035895 HPr-like superfamily AL543_04700 2a0bca41fe37c54aa4afcb16945b0a1c 380 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 140 1.1E-31 T 11-10-2018 IPR002178 PTS EIIA type-2 domain AL543_04700 2a0bca41fe37c54aa4afcb16945b0a1c 380 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 11-10-2018 IPR002178 PTS EIIA type-2 domain AL543_04700 2a0bca41fe37c54aa4afcb16945b0a1c 380 Pfam PF00381 PTS HPr component phosphorylation site 295 374 2.8E-24 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AL543_04700 2a0bca41fe37c54aa4afcb16945b0a1c 380 SUPERFAMILY SSF55804 145 275 1.05E-18 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AL543_04700 2a0bca41fe37c54aa4afcb16945b0a1c 380 PRINTS PR00107 Phosphocarrier protein signature 302 318 7.4E-17 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AL543_04700 2a0bca41fe37c54aa4afcb16945b0a1c 380 PRINTS PR00107 Phosphocarrier protein signature 345 362 7.4E-17 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AL543_04700 2a0bca41fe37c54aa4afcb16945b0a1c 380 PRINTS PR00107 Phosphocarrier protein signature 330 345 7.4E-17 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AL543_04700 2a0bca41fe37c54aa4afcb16945b0a1c 380 Gene3D G3DSA:3.40.930.10 1 142 1.9E-39 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AL543_04700 2a0bca41fe37c54aa4afcb16945b0a1c 380 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 302 309 - T 11-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AL543_04700 2a0bca41fe37c54aa4afcb16945b0a1c 380 Gene3D G3DSA:3.40.930.10 143 275 2.7E-7 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AL543_04700 2a0bca41fe37c54aa4afcb16945b0a1c 380 Gene3D G3DSA:3.30.1340.10 288 374 1.6E-26 T 11-10-2018 IPR035895 HPr-like superfamily AL543_01430 33368634456bebf732b13d6a07e022d5 847 ProSitePatterns PS01095 Chitinases family 18 active site. 307 315 - T 11-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AL543_01430 33368634456bebf732b13d6a07e022d5 847 Gene3D G3DSA:2.60.40.10 22 132 1.2E-44 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL543_01430 33368634456bebf732b13d6a07e022d5 847 SMART SM00089 701 787 0.22 T 11-10-2018 IPR022409 PKD/Chitinase domain AL543_01430 33368634456bebf732b13d6a07e022d5 847 SMART SM00089 601 691 8.5E-8 T 11-10-2018 IPR022409 PKD/Chitinase domain AL543_01430 33368634456bebf732b13d6a07e022d5 847 SMART SM00089 52 134 0.76 T 11-10-2018 IPR022409 PKD/Chitinase domain AL543_01430 33368634456bebf732b13d6a07e022d5 847 Gene3D G3DSA:3.20.20.80 162 577 2.3E-172 T 11-10-2018 AL543_01430 33368634456bebf732b13d6a07e022d5 847 SUPERFAMILY SSF81296 21 133 9.94E-33 T 11-10-2018 IPR014756 Immunoglobulin E-set AL543_01430 33368634456bebf732b13d6a07e022d5 847 SUPERFAMILY SSF54556 461 546 1.83E-15 T 11-10-2018 IPR029070 Chitinase insertion domain superfamily AL543_01430 33368634456bebf732b13d6a07e022d5 847 Gene3D G3DSA:2.60.40.10 598 694 2.1E-23 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL543_01430 33368634456bebf732b13d6a07e022d5 847 Gene3D G3DSA:2.10.10.20 794 837 7.4E-15 T 11-10-2018 AL543_01430 33368634456bebf732b13d6a07e022d5 847 SUPERFAMILY SSF49299 597 690 6.28E-11 T 11-10-2018 IPR035986 PKD domain superfamily AL543_01430 33368634456bebf732b13d6a07e022d5 847 SUPERFAMILY SSF51055 791 840 9.22E-13 T 11-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL543_01430 33368634456bebf732b13d6a07e022d5 847 Pfam PF02010 REJ domain 664 786 4.2E-5 T 11-10-2018 IPR002859 PKD/REJ-like domain AL543_01430 33368634456bebf732b13d6a07e022d5 847 SUPERFAMILY SSF51445 153 579 2.22E-88 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AL543_01430 33368634456bebf732b13d6a07e022d5 847 Pfam PF08329 Chitinase A, N-terminal domain 20 154 5.5E-54 T 11-10-2018 IPR013540 Chitinase A N-terminal GO:0004568|GO:0006032 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AL543_01430 33368634456bebf732b13d6a07e022d5 847 Gene3D G3DSA:3.10.50.10 466 551 2.3E-172 T 11-10-2018 IPR029070 Chitinase insertion domain superfamily AL543_01430 33368634456bebf732b13d6a07e022d5 847 SMART SM00636 159 575 8.8E-160 T 11-10-2018 IPR011583 Chitinase II GO:0008061 AL543_01430 33368634456bebf732b13d6a07e022d5 847 SMART SM00495 794 839 1.1E-8 T 11-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL543_01430 33368634456bebf732b13d6a07e022d5 847 SUPERFAMILY SSF49299 697 785 3.53E-5 T 11-10-2018 IPR035986 PKD domain superfamily AL543_01430 33368634456bebf732b13d6a07e022d5 847 Pfam PF00704 Glycosyl hydrolases family 18 161 575 5.8E-87 T 11-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 AL543_01430 33368634456bebf732b13d6a07e022d5 847 Gene3D G3DSA:2.60.40.10 695 784 2.2E-12 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL543_10935 6474e859bd36b3e2814431915b024f8c 100 Gene3D G3DSA:2.40.50.140 1 100 3.2E-29 T 11-10-2018 AL543_10935 6474e859bd36b3e2814431915b024f8c 100 Hamap MF_00720 Primosomal replication protein N [priB]. 2 100 21.734 T 11-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 AL543_10935 6474e859bd36b3e2814431915b024f8c 100 SUPERFAMILY SSF50249 1 99 7.54E-26 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL543_10935 6474e859bd36b3e2814431915b024f8c 100 PIRSF PIRSF003135 1 100 1.0E-44 T 11-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 AL543_10935 6474e859bd36b3e2814431915b024f8c 100 Pfam PF00436 Single-strand binding protein family 3 88 2.6E-10 T 11-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 AL543_10935 6474e859bd36b3e2814431915b024f8c 100 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 3 100 5.2E-32 T 11-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 AL543_04010 900f8eaf3ee5384c9b1f18bdf745fabf 680 Gene3D G3DSA:3.40.50.970 17 341 9.2E-133 T 11-10-2018 AL543_04010 900f8eaf3ee5384c9b1f18bdf745fabf 680 SMART SM00861 370 541 2.7E-66 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL543_04010 900f8eaf3ee5384c9b1f18bdf745fabf 680 Gene3D G3DSA:3.40.50.970 342 553 9.5E-84 T 11-10-2018 AL543_04010 900f8eaf3ee5384c9b1f18bdf745fabf 680 Pfam PF02779 Transketolase, pyrimidine binding domain 370 540 5.4E-47 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL543_04010 900f8eaf3ee5384c9b1f18bdf745fabf 680 SUPERFAMILY SSF52922 549 680 1.1E-43 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AL543_04010 900f8eaf3ee5384c9b1f18bdf745fabf 680 Pfam PF02780 Transketolase, C-terminal domain 557 671 1.2E-18 T 11-10-2018 IPR033248 Transketolase, C-terminal domain AL543_04010 900f8eaf3ee5384c9b1f18bdf745fabf 680 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 19 349 7.0E-169 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL543_04010 900f8eaf3ee5384c9b1f18bdf745fabf 680 SUPERFAMILY SSF52518 348 542 1.33E-67 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AL543_04010 900f8eaf3ee5384c9b1f18bdf745fabf 680 ProSitePatterns PS00801 Transketolase signature 1. 27 47 - T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL543_04010 900f8eaf3ee5384c9b1f18bdf745fabf 680 SUPERFAMILY SSF52518 13 335 9.64E-121 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AL543_04010 900f8eaf3ee5384c9b1f18bdf745fabf 680 ProSitePatterns PS00802 Transketolase signature 2. 483 499 - T 11-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL543_04010 900f8eaf3ee5384c9b1f18bdf745fabf 680 TIGRFAM TIGR00232 tktlase_bact: transketolase 20 679 0.0 T 11-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 AL543_04010 900f8eaf3ee5384c9b1f18bdf745fabf 680 Gene3D G3DSA:3.40.50.920 554 680 6.3E-44 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AL543_06080 1aefbd5287cfe12860c27eae028d1d4c 262 SUPERFAMILY SSF51161 1 262 7.27E-82 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AL543_06080 1aefbd5287cfe12860c27eae028d1d4c 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 20 48 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AL543_06080 1aefbd5287cfe12860c27eae028d1d4c 262 PIRSF PIRSF000456 4 262 3.1E-109 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 AL543_06080 1aefbd5287cfe12860c27eae028d1d4c 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 262 48.29 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 AL543_06080 1aefbd5287cfe12860c27eae028d1d4c 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 2 32 4.1E-7 T 11-10-2018 IPR001451 Hexapeptide repeat AL543_06080 1aefbd5287cfe12860c27eae028d1d4c 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 1.5E-8 T 11-10-2018 IPR001451 Hexapeptide repeat AL543_06080 1aefbd5287cfe12860c27eae028d1d4c 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 144 177 0.0012 T 11-10-2018 IPR001451 Hexapeptide repeat AL543_06080 1aefbd5287cfe12860c27eae028d1d4c 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 260 1.4E-109 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 AL543_06080 1aefbd5287cfe12860c27eae028d1d4c 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 3.2E-31 T 11-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 AL543_06080 1aefbd5287cfe12860c27eae028d1d4c 262 Gene3D G3DSA:1.20.1180.10 197 262 8.1E-28 T 11-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 AL543_06080 1aefbd5287cfe12860c27eae028d1d4c 262 Gene3D G3DSA:2.160.10.10 1 196 9.4E-54 T 11-10-2018 AL543_05695 c8ae2554bb951928e983a43f30b9da1e 115 Gene3D G3DSA:1.10.260.40 2 89 9.1E-13 T 11-10-2018 AL543_05695 c8ae2554bb951928e983a43f30b9da1e 115 SUPERFAMILY SSF47413 3 79 7.11E-18 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL543_02195 7616956e5ff518916554117723bc24d3 292 Gene3D G3DSA:3.40.50.2300 32 277 1.2E-96 T 11-10-2018 AL543_02195 7616956e5ff518916554117723bc24d3 292 Pfam PF13407 Periplasmic binding protein domain 27 277 2.6E-60 T 11-10-2018 IPR025997 Periplasmic binding protein AL543_02195 7616956e5ff518916554117723bc24d3 292 Gene3D G3DSA:3.40.50.2300 125 259 1.2E-96 T 11-10-2018 AL543_02195 7616956e5ff518916554117723bc24d3 292 SUPERFAMILY SSF53822 4 291 7.21E-84 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AL543_18885 6f648ed5e9924e034df3960c76dbbf57 426 SUPERFAMILY SSF52540 65 404 2.23E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_18885 6f648ed5e9924e034df3960c76dbbf57 426 Gene3D G3DSA:1.10.8.60 318 426 5.1E-41 T 11-10-2018 AL543_18885 6f648ed5e9924e034df3960c76dbbf57 426 SMART SM00994 13 52 1.0E-24 T 11-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 AL543_18885 6f648ed5e9924e034df3960c76dbbf57 426 SUPERFAMILY SSF57716 14 49 5.84E-12 T 11-10-2018 AL543_18885 6f648ed5e9924e034df3960c76dbbf57 426 Gene3D G3DSA:3.40.50.300 59 317 2.8E-108 T 11-10-2018 AL543_18885 6f648ed5e9924e034df3960c76dbbf57 426 Gene3D G3DSA:3.30.50.30 2 53 2.7E-26 T 11-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily AL543_18885 6f648ed5e9924e034df3960c76dbbf57 426 Pfam PF07724 AAA domain (Cdc48 subfamily) 114 312 6.0E-49 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL543_18885 6f648ed5e9924e034df3960c76dbbf57 426 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 319 396 2.2E-15 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AL543_18885 6f648ed5e9924e034df3960c76dbbf57 426 SMART SM00382 113 266 1.6E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_18885 6f648ed5e9924e034df3960c76dbbf57 426 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 417 53.21 T 11-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 AL543_18885 6f648ed5e9924e034df3960c76dbbf57 426 Pfam PF06689 ClpX C4-type zinc finger 14 51 1.2E-20 T 11-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 AL543_18885 6f648ed5e9924e034df3960c76dbbf57 426 SMART SM01086 319 414 9.0E-33 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AL543_18885 6f648ed5e9924e034df3960c76dbbf57 426 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 12 414 5.7E-210 T 11-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 AL543_03765 85eb112dab0a8bdb38f9d88b7eb0d069 151 SUPERFAMILY SSF48695 33 148 1.08E-41 T 11-10-2018 IPR036280 Multiheme cytochrome superfamily AL543_03765 85eb112dab0a8bdb38f9d88b7eb0d069 151 Gene3D G3DSA:1.10.1130.10 65 132 3.0E-29 T 11-10-2018 AL543_03765 85eb112dab0a8bdb38f9d88b7eb0d069 151 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 32 145 3.8E-50 T 11-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB AL543_03765 85eb112dab0a8bdb38f9d88b7eb0d069 151 PIRSF PIRSF006105 1 151 1.2E-47 T 11-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB AL543_07665 9dea5ce04b0380f884744818290ad693 302 PIRSF PIRSF002936 1 302 5.2E-156 T 11-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AL543_07665 9dea5ce04b0380f884744818290ad693 302 Gene3D G3DSA:3.40.50.620 7 212 5.3E-65 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL543_07665 9dea5ce04b0380f884744818290ad693 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 7.6E-163 T 11-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AL543_07665 9dea5ce04b0380f884744818290ad693 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 57.749 T 11-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AL543_07665 9dea5ce04b0380f884744818290ad693 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 6.2E-64 T 11-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 AL543_07665 9dea5ce04b0380f884744818290ad693 302 SUPERFAMILY SSF52402 6 209 3.72E-73 T 11-10-2018 AL543_18655 ccd3fac7cf123c12c8a80f296145e2bf 164 SMART SM00344 12 121 2.3E-54 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AL543_18655 ccd3fac7cf123c12c8a80f296145e2bf 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 6.2E-23 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL543_18655 ccd3fac7cf123c12c8a80f296145e2bf 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 6.2E-23 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL543_18655 ccd3fac7cf123c12c8a80f296145e2bf 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 6.2E-23 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL543_18655 ccd3fac7cf123c12c8a80f296145e2bf 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 11-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AL543_18655 ccd3fac7cf123c12c8a80f296145e2bf 164 Gene3D G3DSA:1.10.10.10 1 63 5.1E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_18655 ccd3fac7cf123c12c8a80f296145e2bf 164 SUPERFAMILY SSF46785 12 70 3.07E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_18655 ccd3fac7cf123c12c8a80f296145e2bf 164 SUPERFAMILY SSF54909 74 158 7.24E-22 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AL543_18655 ccd3fac7cf123c12c8a80f296145e2bf 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 59 2.2E-21 T 11-10-2018 AL543_18655 ccd3fac7cf123c12c8a80f296145e2bf 164 Gene3D G3DSA:3.30.70.920 64 159 2.4E-24 T 11-10-2018 AL543_18655 ccd3fac7cf123c12c8a80f296145e2bf 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 1.4E-23 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AL543_17900 681b41e4c3241099b91630805868121b 221 Gene3D G3DSA:1.20.120.1820 5 126 7.9E-41 T 11-10-2018 AL543_17900 681b41e4c3241099b91630805868121b 221 Gene3D G3DSA:1.20.1280.20 129 220 1.3E-25 T 11-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL543_17900 681b41e4c3241099b91630805868121b 221 Pfam PF02613 Nitrate reductase delta subunit 51 183 3.1E-39 T 11-10-2018 IPR020945 DMSO/Nitrate reductase chaperone AL543_17900 681b41e4c3241099b91630805868121b 221 SUPERFAMILY SSF89155 9 216 6.15E-52 T 11-10-2018 IPR036411 TorD-like superfamily AL543_17900 681b41e4c3241099b91630805868121b 221 Hamap MF_01150 Chaperone protein TorD [torD]. 4 212 34.357 T 11-10-2018 IPR023069 Chaperone TorD AL543_05730 016e852bff017695c7a51021eb4c7d9e 639 Gene3D G3DSA:3.10.105.10 351 600 3.0E-39 T 11-10-2018 AL543_05730 016e852bff017695c7a51021eb4c7d9e 639 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 102 535 3.0E-73 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain AL543_05730 016e852bff017695c7a51021eb4c7d9e 639 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 108 130 - T 11-10-2018 IPR023765 Solute-binding protein family 5, conserved site AL543_05730 016e852bff017695c7a51021eb4c7d9e 639 SUPERFAMILY SSF53850 79 625 4.52E-77 T 11-10-2018 AL543_05730 016e852bff017695c7a51021eb4c7d9e 639 PIRSF PIRSF002741 26 223 1.1E-20 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL543_05730 016e852bff017695c7a51021eb4c7d9e 639 PIRSF PIRSF002741 269 534 2.1E-26 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL543_05730 016e852bff017695c7a51021eb4c7d9e 639 PIRSF PIRSF002741 559 627 13.0 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL543_05730 016e852bff017695c7a51021eb4c7d9e 639 Gene3D G3DSA:3.40.190.10 65 339 4.3E-41 T 11-10-2018 AL543_12975 4690c87c171e00d489669117dcd0323c 616 SUPERFAMILY SSF53067 200 376 1.88E-49 T 11-10-2018 AL543_12975 4690c87c171e00d489669117dcd0323c 616 Gene3D G3DSA:2.60.34.10 378 518 5.8E-50 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 AL543_12975 4690c87c171e00d489669117dcd0323c 616 Gene3D G3DSA:3.90.640.10 238 310 1.2E-109 T 11-10-2018 AL543_12975 4690c87c171e00d489669117dcd0323c 616 Pfam PF00012 Hsp70 protein 22 600 3.7E-191 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL543_12975 4690c87c171e00d489669117dcd0323c 616 SUPERFAMILY SSF53067 19 196 2.03E-49 T 11-10-2018 AL543_12975 4690c87c171e00d489669117dcd0323c 616 SUPERFAMILY SSF100934 503 615 7.65E-35 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 AL543_12975 4690c87c171e00d489669117dcd0323c 616 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 615 6.4E-264 T 11-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 AL543_12975 4690c87c171e00d489669117dcd0323c 616 SUPERFAMILY SSF100920 384 536 3.66E-52 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 AL543_12975 4690c87c171e00d489669117dcd0323c 616 Gene3D G3DSA:1.20.1270.10 519 615 2.1E-27 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 AL543_12975 4690c87c171e00d489669117dcd0323c 616 Gene3D G3DSA:3.30.420.40 23 373 1.2E-109 T 11-10-2018 AL543_12975 4690c87c171e00d489669117dcd0323c 616 PRINTS PR00301 70kDa heat shock protein signature 328 344 2.2E-54 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL543_12975 4690c87c171e00d489669117dcd0323c 616 PRINTS PR00301 70kDa heat shock protein signature 20 33 2.2E-54 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL543_12975 4690c87c171e00d489669117dcd0323c 616 PRINTS PR00301 70kDa heat shock protein signature 465 481 2.2E-54 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL543_12975 4690c87c171e00d489669117dcd0323c 616 PRINTS PR00301 70kDa heat shock protein signature 211 221 2.2E-54 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL543_12975 4690c87c171e00d489669117dcd0323c 616 PRINTS PR00301 70kDa heat shock protein signature 152 172 2.2E-54 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL543_12975 4690c87c171e00d489669117dcd0323c 616 PRINTS PR00301 70kDa heat shock protein signature 70 78 2.2E-54 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL543_12975 4690c87c171e00d489669117dcd0323c 616 PRINTS PR00301 70kDa heat shock protein signature 384 403 2.2E-54 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL543_12975 4690c87c171e00d489669117dcd0323c 616 PRINTS PR00301 70kDa heat shock protein signature 359 379 2.2E-54 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL543_12975 4690c87c171e00d489669117dcd0323c 616 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 616 45.641 T 11-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 AL543_12975 4690c87c171e00d489669117dcd0323c 616 Gene3D G3DSA:3.30.420.40 194 360 1.2E-109 T 11-10-2018 AL543_12975 4690c87c171e00d489669117dcd0323c 616 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AL543_12975 4690c87c171e00d489669117dcd0323c 616 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AL543_05815 86355fecabcfb3621f76b658172c3717 330 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 28 193 6.0E-13 T 11-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal AL543_05815 86355fecabcfb3621f76b658172c3717 330 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 294 309 7.2E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL543_05815 86355fecabcfb3621f76b658172c3717 330 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 309 325 7.2E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL543_05815 86355fecabcfb3621f76b658172c3717 330 Gene3D G3DSA:1.10.10.60 230 329 4.1E-17 T 11-10-2018 AL543_05815 86355fecabcfb3621f76b658172c3717 330 SUPERFAMILY SSF46689 284 327 1.72E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_05815 86355fecabcfb3621f76b658172c3717 330 SMART SM00342 244 325 4.0E-13 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL543_05815 86355fecabcfb3621f76b658172c3717 330 Pfam PF12833 Helix-turn-helix domain 252 327 8.0E-13 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL543_13655 332ee3e0556feab20c1e24fe45b073d9 344 SUPERFAMILY SSF52540 1 239 2.03E-82 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_13655 332ee3e0556feab20c1e24fe45b073d9 344 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_13655 332ee3e0556feab20c1e24fe45b073d9 344 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 1.3E-206 T 11-10-2018 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 AL543_13655 332ee3e0556feab20c1e24fe45b073d9 344 Pfam PF00005 ABC transporter 21 169 6.4E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_13655 332ee3e0556feab20c1e24fe45b073d9 344 Gene3D G3DSA:3.40.50.300 1 232 4.3E-74 T 11-10-2018 AL543_13655 332ee3e0556feab20c1e24fe45b073d9 344 SMART SM00930 265 340 3.3E-29 T 11-10-2018 IPR018449 NIL domain AL543_13655 332ee3e0556feab20c1e24fe45b073d9 344 SMART SM00382 30 235 1.8E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_13655 332ee3e0556feab20c1e24fe45b073d9 344 SUPERFAMILY SSF55021 248 343 7.9E-26 T 11-10-2018 AL543_13655 332ee3e0556feab20c1e24fe45b073d9 344 Gene3D G3DSA:3.30.70.260 244 344 6.0E-41 T 11-10-2018 AL543_13655 332ee3e0556feab20c1e24fe45b073d9 344 Pfam PF09383 NIL domain 268 339 2.7E-21 T 11-10-2018 IPR018449 NIL domain AL543_00875 708906d0acd2a8f8b042619cd8a423d9 266 Gene3D G3DSA:1.10.3720.10 47 261 3.3E-54 T 11-10-2018 IPR035906 MetI-like superfamily AL543_00875 708906d0acd2a8f8b042619cd8a423d9 266 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 60 154 3.0E-22 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 AL543_00875 708906d0acd2a8f8b042619cd8a423d9 266 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 259 4.9E-21 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL543_00875 708906d0acd2a8f8b042619cd8a423d9 266 SUPERFAMILY SSF161098 59 246 6.41E-44 T 11-10-2018 IPR035906 MetI-like superfamily AL543_07210 0d391265aea8c9211eebd35ddfb53330 194 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 7 188 7.2E-44 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase AL543_07210 0d391265aea8c9211eebd35ddfb53330 194 SUPERFAMILY SSF100950 4 194 3.35E-57 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AL543_07210 0d391265aea8c9211eebd35ddfb53330 194 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 7 188 3.1E-54 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase AL543_07210 0d391265aea8c9211eebd35ddfb53330 194 Gene3D G3DSA:3.40.50.10420 1 193 2.2E-57 T 11-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily AL543_07210 0d391265aea8c9211eebd35ddfb53330 194 PIRSF PIRSF006806 1 191 7.4E-37 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase AL543_11550 867f3f37f6bc068623e7a852ab325956 345 Gene3D G3DSA:3.40.50.300 102 343 5.7E-101 T 11-10-2018 AL543_11550 867f3f37f6bc068623e7a852ab325956 345 Gene3D G3DSA:3.30.450.90 1 100 2.2E-36 T 11-10-2018 AL543_11550 867f3f37f6bc068623e7a852ab325956 345 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 333 4.6E-151 T 11-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 AL543_11550 867f3f37f6bc068623e7a852ab325956 345 Pfam PF00437 Type II/IV secretion system protein 12 270 2.6E-46 T 11-10-2018 IPR001482 Type II/IV secretion system protein AL543_11550 867f3f37f6bc068623e7a852ab325956 345 SUPERFAMILY SSF52540 5 335 5.98E-76 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_11550 867f3f37f6bc068623e7a852ab325956 345 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 11-10-2018 IPR001482 Type II/IV secretion system protein AL543_19295 464dec70d0c9165c52bf8dbde00cdb72 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 123 3.7E-15 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL543_19295 464dec70d0c9165c52bf8dbde00cdb72 131 ProSitePatterns PS00935 Glyoxalase I signature 2. 67 79 - T 11-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AL543_19295 464dec70d0c9165c52bf8dbde00cdb72 131 SUPERFAMILY SSF54593 2 130 5.5E-27 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL543_19295 464dec70d0c9165c52bf8dbde00cdb72 131 Gene3D G3DSA:3.10.180.10 2 129 3.0E-30 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL543_12060 62dca7a4493083b07593f6804a773cea 222 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 11-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AL543_12060 62dca7a4493083b07593f6804a773cea 222 Pfam PF00484 Carbonic anhydrase 38 188 6.4E-50 T 11-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AL543_12060 62dca7a4493083b07593f6804a773cea 222 Gene3D G3DSA:3.40.1050.10 1 222 1.2E-92 T 11-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 AL543_12060 62dca7a4493083b07593f6804a773cea 222 SUPERFAMILY SSF53056 2 211 1.07E-74 T 11-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 AL543_12060 62dca7a4493083b07593f6804a773cea 222 SMART SM00947 30 192 2.6E-66 T 11-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AL543_12060 62dca7a4493083b07593f6804a773cea 222 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 11-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AL543_08800 a5af5cd67a6140709ea9dcac1ddef422 224 Gene3D G3DSA:3.40.50.300 1 222 6.9E-62 T 11-10-2018 AL543_08800 a5af5cd67a6140709ea9dcac1ddef422 224 Pfam PF00005 ABC transporter 18 165 6.8E-36 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_08800 a5af5cd67a6140709ea9dcac1ddef422 224 SMART SM00382 27 215 1.5E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_08800 a5af5cd67a6140709ea9dcac1ddef422 224 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 1.3E-90 T 11-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 AL543_08800 a5af5cd67a6140709ea9dcac1ddef422 224 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_08800 a5af5cd67a6140709ea9dcac1ddef422 224 SUPERFAMILY SSF52540 1 219 9.05E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_19110 ede361681da3524acbb3a315312a3ab0 671 Gene3D G3DSA:1.10.287.950 340 671 6.8E-62 T 11-10-2018 AL543_19110 ede361681da3524acbb3a315312a3ab0 671 SMART SM00304 340 394 7.6E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_19110 ede361681da3524acbb3a315312a3ab0 671 SMART SM00283 409 670 1.4E-41 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_19110 ede361681da3524acbb3a315312a3ab0 671 SUPERFAMILY SSF58104 362 671 3.01E-61 T 11-10-2018 AL543_19110 ede361681da3524acbb3a315312a3ab0 671 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 472 636 1.6E-37 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_06105 3ae7d82e14276d2e5b0e9b1e44f4dab5 452 SUPERFAMILY SSF50156 91 184 5.52E-13 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AL543_06105 3ae7d82e14276d2e5b0e9b1e44f4dab5 452 SUPERFAMILY SSF50156 196 291 3.42E-16 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AL543_06105 3ae7d82e14276d2e5b0e9b1e44f4dab5 452 Gene3D G3DSA:2.30.42.10 226 314 7.3E-19 T 11-10-2018 AL543_06105 3ae7d82e14276d2e5b0e9b1e44f4dab5 452 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 4 452 8.3E-138 T 11-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 AL543_06105 3ae7d82e14276d2e5b0e9b1e44f4dab5 452 Pfam PF02163 Peptidase family M50 10 440 7.7E-86 T 11-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 AL543_06105 3ae7d82e14276d2e5b0e9b1e44f4dab5 452 Gene3D G3DSA:2.30.42.10 126 221 2.9E-31 T 11-10-2018 AL543_06105 3ae7d82e14276d2e5b0e9b1e44f4dab5 452 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 229 277 1.6E-6 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AL543_06105 3ae7d82e14276d2e5b0e9b1e44f4dab5 452 SMART SM00228 115 186 0.0055 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AL543_06105 3ae7d82e14276d2e5b0e9b1e44f4dab5 452 SMART SM00228 212 281 6.9E-7 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AL543_09175 4848c709da376de9444a404f84861100 398 Gene3D G3DSA:2.40.30.10 192 343 1.8E-129 T 11-10-2018 AL543_09175 4848c709da376de9444a404f84861100 398 Gene3D G3DSA:1.10.8.260 266 326 1.8E-129 T 11-10-2018 IPR023166 HI0933-like insert domain superfamily AL543_09175 4848c709da376de9444a404f84861100 398 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 10 396 4.9E-129 T 11-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like AL543_09175 4848c709da376de9444a404f84861100 398 Gene3D G3DSA:3.50.50.60 11 392 1.8E-129 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_09175 4848c709da376de9444a404f84861100 398 Pfam PF03486 HI0933-like protein 9 396 9.6E-156 T 11-10-2018 AL543_09175 4848c709da376de9444a404f84861100 398 SUPERFAMILY SSF160996 194 342 3.92E-42 T 11-10-2018 AL543_09175 4848c709da376de9444a404f84861100 398 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 159 168 3.5E-9 T 11-10-2018 AL543_09175 4848c709da376de9444a404f84861100 398 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 366 373 3.5E-9 T 11-10-2018 AL543_09175 4848c709da376de9444a404f84861100 398 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 9 31 3.5E-9 T 11-10-2018 AL543_09175 4848c709da376de9444a404f84861100 398 SUPERFAMILY SSF51905 4 398 8.29E-57 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_04135 4fdceb1a23988360e16e8af67b06c3b6 234 SMART SM00345 6 65 9.6E-17 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL543_04135 4fdceb1a23988360e16e8af67b06c3b6 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 25 39 2.8E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL543_04135 4fdceb1a23988360e16e8af67b06c3b6 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 55 2.8E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL543_04135 4fdceb1a23988360e16e8af67b06c3b6 234 SMART SM00866 86 225 3.6E-32 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AL543_04135 4fdceb1a23988360e16e8af67b06c3b6 234 TIGRFAM TIGR03337 phnR: phosphonate utilization transcriptional regulator PhnR 1 230 7.7E-112 T 11-10-2018 IPR017722 Phosphonate utilization transcriptional regulator PhnR AL543_04135 4fdceb1a23988360e16e8af67b06c3b6 234 Pfam PF07702 UTRA domain 86 224 2.2E-35 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AL543_04135 4fdceb1a23988360e16e8af67b06c3b6 234 SUPERFAMILY SSF64288 53 229 3.3E-40 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AL543_04135 4fdceb1a23988360e16e8af67b06c3b6 234 SUPERFAMILY SSF46785 3 69 7.89E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_04135 4fdceb1a23988360e16e8af67b06c3b6 234 Gene3D G3DSA:3.40.1410.10 70 228 2.5E-34 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AL543_04135 4fdceb1a23988360e16e8af67b06c3b6 234 Gene3D G3DSA:1.10.10.10 1 69 3.7E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_04135 4fdceb1a23988360e16e8af67b06c3b6 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 65 1.2E-18 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL543_02890 072485cd2ea27a3758911d883dbcb673 111 Pfam PF02656 Domain of unknown function (DUF202) 10 78 3.4E-15 T 11-10-2018 IPR003807 Domain of unknown function DUF202 AL543_08095 94e769eb3c10296e4dee979bd5d6a271 273 PIRSF PIRSF000441 75 266 2.5E-57 T 11-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 AL543_08095 94e769eb3c10296e4dee979bd5d6a271 273 SUPERFAMILY SSF51161 6 260 9.56E-65 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AL543_08095 94e769eb3c10296e4dee979bd5d6a271 273 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 82 242 9.9E-76 T 11-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 AL543_08095 94e769eb3c10296e4dee979bd5d6a271 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AL543_08095 94e769eb3c10296e4dee979bd5d6a271 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 226 1.6E-9 T 11-10-2018 IPR001451 Hexapeptide repeat AL543_08095 94e769eb3c10296e4dee979bd5d6a271 273 Gene3D G3DSA:1.10.3130.10 1 142 2.8E-52 T 11-10-2018 AL543_08095 94e769eb3c10296e4dee979bd5d6a271 273 SMART SM00971 9 113 1.2E-60 T 11-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 AL543_08095 94e769eb3c10296e4dee979bd5d6a271 273 Pfam PF06426 Serine acetyltransferase, N-terminal 9 112 1.5E-38 T 11-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 AL543_08095 94e769eb3c10296e4dee979bd5d6a271 273 Gene3D G3DSA:2.160.10.10 143 273 1.5E-38 T 11-10-2018 AL543_09470 c68a44efc0d16c53581e33287b009262 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 49.574 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL543_09470 c68a44efc0d16c53581e33287b009262 513 SUPERFAMILY SSF50615 10 94 1.08E-25 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL543_09470 c68a44efc0d16c53581e33287b009262 513 Gene3D G3DSA:3.40.50.300 94 382 5.9E-131 T 11-10-2018 AL543_09470 c68a44efc0d16c53581e33287b009262 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 1.2E-43 T 11-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL543_09470 c68a44efc0d16c53581e33287b009262 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 8.0E-251 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL543_09470 c68a44efc0d16c53581e33287b009262 513 Gene3D G3DSA:1.20.150.20 383 513 6.5E-47 T 11-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL543_09470 c68a44efc0d16c53581e33287b009262 513 Gene3D G3DSA:2.40.30.20 1 93 2.7E-29 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL543_09470 c68a44efc0d16c53581e33287b009262 513 SUPERFAMILY SSF52540 96 381 1.45E-95 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_09470 c68a44efc0d16c53581e33287b009262 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL543_09470 c68a44efc0d16c53581e33287b009262 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 92 1.9E-13 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL543_09470 c68a44efc0d16c53581e33287b009262 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 6.9E-73 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL543_09470 c68a44efc0d16c53581e33287b009262 513 SUPERFAMILY SSF47917 383 511 1.2E-44 T 11-10-2018 AL543_12070 8952ceed9f7c76b52c45297c8681c013 305 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_12070 8952ceed9f7c76b52c45297c8681c013 305 SUPERFAMILY SSF52540 3 232 1.64E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_12070 8952ceed9f7c76b52c45297c8681c013 305 SMART SM00382 29 212 8.8E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_12070 8952ceed9f7c76b52c45297c8681c013 305 Gene3D G3DSA:3.40.50.300 1 235 9.2E-66 T 11-10-2018 AL543_12070 8952ceed9f7c76b52c45297c8681c013 305 Pfam PF00005 ABC transporter 20 164 7.8E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_14940 5ca9166b870d784c15ad29e48d2d1021 205 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 203 35.421 T 11-10-2018 IPR007451 High frequency lysogenization protein HflD AL543_14940 5ca9166b870d784c15ad29e48d2d1021 205 SUPERFAMILY SSF101322 2 204 2.75E-79 T 11-10-2018 IPR035932 HflD-like superfamily AL543_14940 5ca9166b870d784c15ad29e48d2d1021 205 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 194 6.0E-106 T 11-10-2018 AL543_14940 5ca9166b870d784c15ad29e48d2d1021 205 Pfam PF04356 Protein of unknown function (DUF489) 7 195 9.6E-76 T 11-10-2018 IPR007451 High frequency lysogenization protein HflD AL543_14940 5ca9166b870d784c15ad29e48d2d1021 205 Gene3D G3DSA:1.10.3890.10 1 205 3.0E-77 T 11-10-2018 IPR035932 HflD-like superfamily AL543_12930 03419a264e6f84fdcd73d6633a8cef3d 617 Gene3D G3DSA:3.30.1360.200 280 433 3.5E-49 T 11-10-2018 AL543_12930 03419a264e6f84fdcd73d6633a8cef3d 617 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 603 1.7E-149 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AL543_12930 03419a264e6f84fdcd73d6633a8cef3d 617 Pfam PF13721 SecD export protein N-terminal TM region 2 103 5.6E-37 T 11-10-2018 IPR027398 SecD export protein N-terminal TM domain AL543_12930 03419a264e6f84fdcd73d6633a8cef3d 617 Pfam PF02355 Protein export membrane protein 435 596 3.5E-19 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AL543_12930 03419a264e6f84fdcd73d6633a8cef3d 617 Pfam PF07549 SecD/SecF GG Motif 115 141 3.6E-7 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AL543_12930 03419a264e6f84fdcd73d6633a8cef3d 617 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 347 596 2.1E-82 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL543_12930 03419a264e6f84fdcd73d6633a8cef3d 617 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 617 47.485 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AL543_12930 03419a264e6f84fdcd73d6633a8cef3d 617 SUPERFAMILY SSF82866 412 608 1.7E-44 T 11-10-2018 AL543_12930 03419a264e6f84fdcd73d6633a8cef3d 617 Gene3D G3DSA:3.30.70.3400 219 439 3.5E-49 T 11-10-2018 AL543_12930 03419a264e6f84fdcd73d6633a8cef3d 617 Gene3D G3DSA:1.20.1640.10 450 602 1.3E-7 T 11-10-2018 AL543_12930 03419a264e6f84fdcd73d6633a8cef3d 617 PRINTS PR00702 Acriflavin resistance protein family signature 505 529 4.8E-5 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_12930 03419a264e6f84fdcd73d6633a8cef3d 617 PRINTS PR00702 Acriflavin resistance protein family signature 451 474 4.8E-5 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_12930 03419a264e6f84fdcd73d6633a8cef3d 617 PRINTS PR00702 Acriflavin resistance protein family signature 580 603 4.8E-5 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_11785 c344389758c19cbe4c4b9771467b9e14 336 SUPERFAMILY SSF88659 225 324 1.24E-25 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AL543_11785 c344389758c19cbe4c4b9771467b9e14 336 PRINTS PR00046 Major sigma-70 factor signature 288 303 1.5E-27 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL543_11785 c344389758c19cbe4c4b9771467b9e14 336 PRINTS PR00046 Major sigma-70 factor signature 303 314 1.5E-27 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL543_11785 c344389758c19cbe4c4b9771467b9e14 336 PRINTS PR00046 Major sigma-70 factor signature 143 151 1.5E-27 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL543_11785 c344389758c19cbe4c4b9771467b9e14 336 PRINTS PR00046 Major sigma-70 factor signature 267 279 1.5E-27 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL543_11785 c344389758c19cbe4c4b9771467b9e14 336 PRINTS PR00046 Major sigma-70 factor signature 119 132 1.5E-27 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL543_11785 c344389758c19cbe4c4b9771467b9e14 336 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 50 329 1.1E-138 T 11-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL543_11785 c344389758c19cbe4c4b9771467b9e14 336 Pfam PF04545 Sigma-70, region 4 263 316 1.3E-17 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 AL543_11785 c344389758c19cbe4c4b9771467b9e14 336 Pfam PF04539 Sigma-70 region 3 175 248 2.6E-22 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 AL543_11785 c344389758c19cbe4c4b9771467b9e14 336 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 91 318 5.6E-37 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AL543_11785 c344389758c19cbe4c4b9771467b9e14 336 Pfam PF04542 Sigma-70 region 2 95 164 7.1E-20 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AL543_11785 c344389758c19cbe4c4b9771467b9e14 336 SUPERFAMILY SSF88659 168 241 1.96E-15 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AL543_11785 c344389758c19cbe4c4b9771467b9e14 336 Gene3D G3DSA:1.10.10.10 168 243 1.0E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_11785 c344389758c19cbe4c4b9771467b9e14 336 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 9 329 39.729 T 11-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL543_11785 c344389758c19cbe4c4b9771467b9e14 336 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 119 132 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL543_11785 c344389758c19cbe4c4b9771467b9e14 336 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 288 314 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL543_11785 c344389758c19cbe4c4b9771467b9e14 336 Pfam PF00140 Sigma-70 factor, region 1.2 57 90 2.6E-13 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL543_11785 c344389758c19cbe4c4b9771467b9e14 336 Gene3D G3DSA:1.10.601.10 8 164 1.3E-48 T 11-10-2018 AL543_11785 c344389758c19cbe4c4b9771467b9e14 336 SUPERFAMILY SSF88946 57 165 5.89E-46 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AL543_11785 c344389758c19cbe4c4b9771467b9e14 336 Gene3D G3DSA:1.10.10.10 245 325 9.1E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_15550 2876cdb27ec75847cd244f84fb009fbd 170 SUPERFAMILY SSF55021 87 166 3.08E-9 T 11-10-2018 AL543_15550 2876cdb27ec75847cd244f84fb009fbd 170 PIRSF PIRSF028103 1 170 5.5E-50 T 11-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 AL543_15550 2876cdb27ec75847cd244f84fb009fbd 170 Gene3D G3DSA:3.30.70.260 85 170 3.5E-12 T 11-10-2018 AL543_15550 2876cdb27ec75847cd244f84fb009fbd 170 Pfam PF13740 ACT domain 4 65 4.0E-9 T 11-10-2018 AL543_03860 98952de0a1abad703e99341c442c056c 147 Pfam PF04945 YHS domain 40 83 4.2E-11 T 11-10-2018 IPR007029 YHS domain AL543_17280 af6cc6794c79152b98fd6e446c34060d 538 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 221 269 1.0E-6 T 11-10-2018 IPR000014 PAS domain AL543_17280 af6cc6794c79152b98fd6e446c34060d 538 SUPERFAMILY SSF55890 323 403 7.19E-10 T 11-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 AL543_17280 af6cc6794c79152b98fd6e446c34060d 538 SMART SM00387 419 537 3.5E-15 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_17280 af6cc6794c79152b98fd6e446c34060d 538 PRINTS PR00344 Bacterial sensor protein C-terminal signature 521 534 2.3E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_17280 af6cc6794c79152b98fd6e446c34060d 538 PRINTS PR00344 Bacterial sensor protein C-terminal signature 498 516 2.3E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_17280 af6cc6794c79152b98fd6e446c34060d 538 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 481 2.3E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_17280 af6cc6794c79152b98fd6e446c34060d 538 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 321 373 1.8E-8 T 11-10-2018 IPR039506 SpoOB, alpha-helical domain AL543_17280 af6cc6794c79152b98fd6e446c34060d 538 Pfam PF00989 PAS fold 217 269 2.9E-6 T 11-10-2018 IPR013767 PAS fold GO:0006355 AL543_17280 af6cc6794c79152b98fd6e446c34060d 538 SUPERFAMILY SSF55785 218 307 4.89E-14 T 11-10-2018 IPR035965 PAS domain superfamily AL543_17280 af6cc6794c79152b98fd6e446c34060d 538 SUPERFAMILY SSF55874 395 534 3.01E-20 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_17280 af6cc6794c79152b98fd6e446c34060d 538 SUPERFAMILY SSF103190 39 169 2.71E-34 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily AL543_17280 af6cc6794c79152b98fd6e446c34060d 538 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 424 536 1.4E-13 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_17280 af6cc6794c79152b98fd6e446c34060d 538 Gene3D G3DSA:3.30.450.20 33 165 2.2E-39 T 11-10-2018 AL543_17280 af6cc6794c79152b98fd6e446c34060d 538 Pfam PF17203 Single cache domain 3 37 168 4.2E-19 T 11-10-2018 IPR033463 Single cache domain 3 AL543_17280 af6cc6794c79152b98fd6e446c34060d 538 Gene3D G3DSA:3.30.450.20 200 311 2.9E-21 T 11-10-2018 AL543_17280 af6cc6794c79152b98fd6e446c34060d 538 Gene3D G3DSA:3.30.565.10 383 537 5.3E-22 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_12130 6e7836778cf0cbf06f5997acd1d1d2a9 865 Pfam PF11791 Aconitate B N-terminal domain 4 156 3.5E-66 T 11-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AL543_12130 6e7836778cf0cbf06f5997acd1d1d2a9 865 Gene3D G3DSA:3.30.499.10 402 529 8.3E-149 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 AL543_12130 6e7836778cf0cbf06f5997acd1d1d2a9 865 SUPERFAMILY SSF53732 379 860 1.05E-146 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 AL543_12130 6e7836778cf0cbf06f5997acd1d1d2a9 865 Pfam PF00330 Aconitase family (aconitate hydratase) 472 818 7.1E-42 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AL543_12130 6e7836778cf0cbf06f5997acd1d1d2a9 865 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 853 0.0 T 11-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AL543_12130 6e7836778cf0cbf06f5997acd1d1d2a9 865 Gene3D G3DSA:3.20.19.10 162 361 5.6E-81 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 AL543_12130 6e7836778cf0cbf06f5997acd1d1d2a9 865 Gene3D G3DSA:3.40.1060.10 385 681 8.3E-149 T 11-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AL543_12130 6e7836778cf0cbf06f5997acd1d1d2a9 865 SUPERFAMILY SSF74778 2 160 5.89E-68 T 11-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AL543_12130 6e7836778cf0cbf06f5997acd1d1d2a9 865 Gene3D G3DSA:1.25.40.310 1 161 1.4E-72 T 11-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AL543_12130 6e7836778cf0cbf06f5997acd1d1d2a9 865 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AL543_12130 6e7836778cf0cbf06f5997acd1d1d2a9 865 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 3.6E-98 T 11-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AL543_12130 6e7836778cf0cbf06f5997acd1d1d2a9 865 SUPERFAMILY SSF52016 163 372 1.94E-69 T 11-10-2018 AL543_12130 6e7836778cf0cbf06f5997acd1d1d2a9 865 PIRSF PIRSF036687 1 859 0.0 T 11-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AL543_12130 6e7836778cf0cbf06f5997acd1d1d2a9 865 Gene3D G3DSA:3.30.499.10 683 865 7.2E-71 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 AL543_12260 2d499efb123cf2478c5bc47ddee7ba36 431 Pfam PF08525 Opacity-associated protein A N-terminal motif 4 31 6.6E-6 T 11-10-2018 IPR013731 Opacity-associated protein A, N-terminal AL543_12260 2d499efb123cf2478c5bc47ddee7ba36 431 SUPERFAMILY SSF51261 145 391 9.42E-71 T 11-10-2018 IPR011055 Duplicated hybrid motif AL543_12260 2d499efb123cf2478c5bc47ddee7ba36 431 Gene3D G3DSA:3.10.450.350 173 409 1.5E-79 T 11-10-2018 AL543_12260 2d499efb123cf2478c5bc47ddee7ba36 431 Gene3D G3DSA:2.70.70.10 267 396 1.5E-79 T 11-10-2018 IPR011055 Duplicated hybrid motif AL543_12260 2d499efb123cf2478c5bc47ddee7ba36 431 Pfam PF01551 Peptidase family M23 296 390 2.0E-30 T 11-10-2018 IPR016047 Peptidase M23 AL543_12260 2d499efb123cf2478c5bc47ddee7ba36 431 Gene3D G3DSA:3.10.450.350 71 161 5.9E-11 T 11-10-2018 AL543_12420 5540b23e1dcd321dd3184adcf34e2503 529 Gene3D G3DSA:3.40.50.300 110 275 3.5E-116 T 11-10-2018 AL543_12420 5540b23e1dcd321dd3184adcf34e2503 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 3.3E-10 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL543_12420 5540b23e1dcd321dd3184adcf34e2503 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 3.3E-10 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL543_12420 5540b23e1dcd321dd3184adcf34e2503 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 3.3E-10 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL543_12420 5540b23e1dcd321dd3184adcf34e2503 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 3.3E-10 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL543_12420 5540b23e1dcd321dd3184adcf34e2503 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 7.8E-9 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AL543_12420 5540b23e1dcd321dd3184adcf34e2503 529 SUPERFAMILY SSF52540 10 278 1.91E-85 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_12420 5540b23e1dcd321dd3184adcf34e2503 529 Pfam PF00009 Elongation factor Tu GTP binding domain 13 277 2.4E-45 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL543_12420 5540b23e1dcd321dd3184adcf34e2503 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 5 529 3.2E-303 T 11-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 AL543_12420 5540b23e1dcd321dd3184adcf34e2503 529 Gene3D G3DSA:3.30.70.3280 390 529 2.3E-52 T 11-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily AL543_12420 5540b23e1dcd321dd3184adcf34e2503 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site AL543_12420 5540b23e1dcd321dd3184adcf34e2503 529 SUPERFAMILY SSF54980 393 468 3.02E-17 T 11-10-2018 IPR035647 EF-G domain III/V-like AL543_12420 5540b23e1dcd321dd3184adcf34e2503 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 153 2.4E-19 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL543_12420 5540b23e1dcd321dd3184adcf34e2503 529 SUPERFAMILY SSF50447 262 393 3.77E-28 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AL543_12420 5540b23e1dcd321dd3184adcf34e2503 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 1.4E-46 T 11-10-2018 IPR032090 Peptide chain release factor 3, C-terminal AL543_12420 5540b23e1dcd321dd3184adcf34e2503 529 Gene3D G3DSA:3.40.50.300 72 379 3.5E-116 T 11-10-2018 AL543_12420 5540b23e1dcd321dd3184adcf34e2503 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 52.107 T 11-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 AL543_04160 a1f6af5f5508dd2fcfb834fe3f8418eb 310 PIRSF PIRSF028235 1 310 3.0E-205 T 11-10-2018 IPR016877 Uncharacterised conserved protein UCP028235 AL543_04160 a1f6af5f5508dd2fcfb834fe3f8418eb 310 SUPERFAMILY SSF64182 9 306 2.49E-12 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily AL543_08995 798de25ffa376d1d4b362262f5baa37e 347 SUPERFAMILY SSF51569 7 335 1.25E-145 T 11-10-2018 AL543_08995 798de25ffa376d1d4b362262f5baa37e 347 Pfam PF00490 Delta-aminolevulinic acid dehydratase 12 332 2.4E-142 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AL543_08995 798de25ffa376d1d4b362262f5baa37e 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 198 217 1.2E-57 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AL543_08995 798de25ffa376d1d4b362262f5baa37e 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 129 143 1.2E-57 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AL543_08995 798de25ffa376d1d4b362262f5baa37e 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 1.2E-57 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AL543_08995 798de25ffa376d1d4b362262f5baa37e 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 252 268 1.2E-57 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AL543_08995 798de25ffa376d1d4b362262f5baa37e 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 277 292 1.2E-57 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AL543_08995 798de25ffa376d1d4b362262f5baa37e 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 160 179 1.2E-57 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AL543_08995 798de25ffa376d1d4b362262f5baa37e 347 Gene3D G3DSA:3.20.20.70 2 337 2.9E-148 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_08995 798de25ffa376d1d4b362262f5baa37e 347 SMART SM01004 9 333 1.1E-246 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AL543_08995 798de25ffa376d1d4b362262f5baa37e 347 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 252 264 - T 11-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AL543_08995 798de25ffa376d1d4b362262f5baa37e 347 PIRSF PIRSF001415 2 336 2.0E-152 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AL543_00820 9ddb0336a2643018f5f2ccf7933ff55d 807 SUPERFAMILY SSF56059 13 396 6.27E-110 T 11-10-2018 AL543_00820 9ddb0336a2643018f5f2ccf7933ff55d 807 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 426 437 - T 11-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 AL543_00820 9ddb0336a2643018f5f2ccf7933ff55d 807 Gene3D G3DSA:3.20.20.60 490 799 4.5E-103 T 11-10-2018 AL543_00820 9ddb0336a2643018f5f2ccf7933ff55d 807 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 494 793 1.2E-60 T 11-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AL543_00820 9ddb0336a2643018f5f2ccf7933ff55d 807 Gene3D G3DSA:3.30.470.20 206 369 6.1E-58 T 11-10-2018 AL543_00820 9ddb0336a2643018f5f2ccf7933ff55d 807 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 706 721 9.3E-6 T 11-10-2018 AL543_00820 9ddb0336a2643018f5f2ccf7933ff55d 807 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 723 738 9.3E-6 T 11-10-2018 AL543_00820 9ddb0336a2643018f5f2ccf7933ff55d 807 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 759 771 9.3E-6 T 11-10-2018 AL543_00820 9ddb0336a2643018f5f2ccf7933ff55d 807 SUPERFAMILY SSF52009 361 479 4.19E-34 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 AL543_00820 9ddb0336a2643018f5f2ccf7933ff55d 807 Gene3D G3DSA:3.30.1490.20 14 205 1.3E-73 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AL543_00820 9ddb0336a2643018f5f2ccf7933ff55d 807 Pfam PF00391 PEP-utilising enzyme, mobile domain 397 467 4.5E-26 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AL543_00820 9ddb0336a2643018f5f2ccf7933ff55d 807 PIRSF PIRSF000854 12 806 0.0 T 11-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 AL543_00820 9ddb0336a2643018f5f2ccf7933ff55d 807 SUPERFAMILY SSF51621 474 802 1.03E-98 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AL543_00820 9ddb0336a2643018f5f2ccf7933ff55d 807 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 19 800 0.0 T 11-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 AL543_00820 9ddb0336a2643018f5f2ccf7933ff55d 807 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 706 724 - T 11-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AL543_00820 9ddb0336a2643018f5f2ccf7933ff55d 807 Gene3D G3DSA:3.50.30.10 371 489 4.6E-41 T 11-10-2018 AL543_00820 9ddb0336a2643018f5f2ccf7933ff55d 807 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 30 357 1.2E-118 T 11-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 AL543_15095 3bcdcd10bcf5c25119bd9b41f290469e 649 SMART SM00387 528 641 1.2E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_15095 3bcdcd10bcf5c25119bd9b41f290469e 649 Gene3D G3DSA:1.10.287.130 318 427 5.6E-15 T 11-10-2018 AL543_15095 3bcdcd10bcf5c25119bd9b41f290469e 649 SMART SM00100 180 304 0.0063 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AL543_15095 3bcdcd10bcf5c25119bd9b41f290469e 649 Gene3D G3DSA:3.30.565.10 487 638 3.6E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_15095 3bcdcd10bcf5c25119bd9b41f290469e 649 Pfam PF00027 Cyclic nucleotide-binding domain 202 288 1.2E-16 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AL543_15095 3bcdcd10bcf5c25119bd9b41f290469e 649 Pfam PF00512 His Kinase A (phospho-acceptor) domain 340 381 1.5E-6 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_15095 3bcdcd10bcf5c25119bd9b41f290469e 649 Gene3D G3DSA:2.60.120.10 176 317 4.9E-21 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL543_15095 3bcdcd10bcf5c25119bd9b41f290469e 649 Gene3D G3DSA:1.10.287.130 460 486 3.6E-38 T 11-10-2018 AL543_15095 3bcdcd10bcf5c25119bd9b41f290469e 649 PRINTS PR00344 Bacterial sensor protein C-terminal signature 569 583 7.3E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_15095 3bcdcd10bcf5c25119bd9b41f290469e 649 PRINTS PR00344 Bacterial sensor protein C-terminal signature 625 638 7.3E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_15095 3bcdcd10bcf5c25119bd9b41f290469e 649 PRINTS PR00344 Bacterial sensor protein C-terminal signature 601 619 7.3E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_15095 3bcdcd10bcf5c25119bd9b41f290469e 649 SUPERFAMILY SSF47384 335 375 1.73E-6 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL543_15095 3bcdcd10bcf5c25119bd9b41f290469e 649 SUPERFAMILY SSF55874 480 641 7.2E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_15095 3bcdcd10bcf5c25119bd9b41f290469e 649 Gene3D G3DSA:3.40.50.2300 2 139 2.8E-7 T 11-10-2018 AL543_15095 3bcdcd10bcf5c25119bd9b41f290469e 649 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 531 639 3.9E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_15095 3bcdcd10bcf5c25119bd9b41f290469e 649 SUPERFAMILY SSF52172 2 124 1.62E-5 T 11-10-2018 IPR011006 CheY-like superfamily AL543_15095 3bcdcd10bcf5c25119bd9b41f290469e 649 SUPERFAMILY SSF51206 202 310 1.57E-20 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like AL543_00350 2287ccee5a8b9a5c9a932a7d5fab42d9 1586 Gene3D G3DSA:3.40.50.2300 1086 1223 1.1E-18 T 11-10-2018 AL543_00350 2287ccee5a8b9a5c9a932a7d5fab42d9 1586 SMART SM00387 953 1073 3.1E-37 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_00350 2287ccee5a8b9a5c9a932a7d5fab42d9 1586 Pfam PF00512 His Kinase A (phospho-acceptor) domain 842 905 7.4E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_00350 2287ccee5a8b9a5c9a932a7d5fab42d9 1586 Gene3D G3DSA:3.30.450.20 705 819 5.9E-20 T 11-10-2018 AL543_00350 2287ccee5a8b9a5c9a932a7d5fab42d9 1586 Pfam PF03924 CHASE domain 80 254 6.5E-41 T 11-10-2018 IPR006189 CHASE domain AL543_00350 2287ccee5a8b9a5c9a932a7d5fab42d9 1586 SUPERFAMILY SSF52172 1240 1365 2.13E-36 T 11-10-2018 IPR011006 CheY-like superfamily AL543_00350 2287ccee5a8b9a5c9a932a7d5fab42d9 1586 Gene3D G3DSA:3.40.50.2300 1231 1362 3.9E-38 T 11-10-2018 AL543_00350 2287ccee5a8b9a5c9a932a7d5fab42d9 1586 SMART SM00091 710 775 3.4E-9 T 11-10-2018 IPR000014 PAS domain AL543_00350 2287ccee5a8b9a5c9a932a7d5fab42d9 1586 Gene3D G3DSA:1.20.120.160 1383 1504 4.8E-6 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AL543_00350 2287ccee5a8b9a5c9a932a7d5fab42d9 1586 SMART SM00448 1089 1209 2.6E-11 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_00350 2287ccee5a8b9a5c9a932a7d5fab42d9 1586 SMART SM00448 1240 1354 3.3E-37 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_00350 2287ccee5a8b9a5c9a932a7d5fab42d9 1586 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 711 827 1.8E-18 T 11-10-2018 IPR000014 PAS domain AL543_00350 2287ccee5a8b9a5c9a932a7d5fab42d9 1586 SMART SM01079 77 264 3.7E-55 T 11-10-2018 IPR006189 CHASE domain AL543_00350 2287ccee5a8b9a5c9a932a7d5fab42d9 1586 SUPERFAMILY SSF52172 1090 1220 6.4E-18 T 11-10-2018 IPR011006 CheY-like superfamily AL543_00350 2287ccee5a8b9a5c9a932a7d5fab42d9 1586 Gene3D G3DSA:3.30.450.20 428 560 2.9E-24 T 11-10-2018 AL543_00350 2287ccee5a8b9a5c9a932a7d5fab42d9 1586 SUPERFAMILY SSF55785 721 830 1.01E-17 T 11-10-2018 IPR035965 PAS domain superfamily AL543_00350 2287ccee5a8b9a5c9a932a7d5fab42d9 1586 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 954 1072 6.2E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_00350 2287ccee5a8b9a5c9a932a7d5fab42d9 1586 SUPERFAMILY SSF103190 385 560 1.07E-36 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily AL543_00350 2287ccee5a8b9a5c9a932a7d5fab42d9 1586 SUPERFAMILY SSF47226 1337 1473 1.03E-7 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AL543_00350 2287ccee5a8b9a5c9a932a7d5fab42d9 1586 Pfam PF13426 PAS domain 720 820 7.2E-11 T 11-10-2018 IPR000014 PAS domain AL543_00350 2287ccee5a8b9a5c9a932a7d5fab42d9 1586 Gene3D G3DSA:3.30.450.350 81 278 1.2E-18 T 11-10-2018 AL543_00350 2287ccee5a8b9a5c9a932a7d5fab42d9 1586 Gene3D G3DSA:3.30.565.10 907 1074 8.5E-52 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_00350 2287ccee5a8b9a5c9a932a7d5fab42d9 1586 Gene3D G3DSA:1.10.287.130 820 904 3.9E-25 T 11-10-2018 AL543_00350 2287ccee5a8b9a5c9a932a7d5fab42d9 1586 SMART SM00388 841 906 7.1E-21 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_00350 2287ccee5a8b9a5c9a932a7d5fab42d9 1586 SUPERFAMILY SSF55874 895 1071 3.54E-43 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_00350 2287ccee5a8b9a5c9a932a7d5fab42d9 1586 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1057 1070 3.2E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_00350 2287ccee5a8b9a5c9a932a7d5fab42d9 1586 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1033 1051 3.2E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_00350 2287ccee5a8b9a5c9a932a7d5fab42d9 1586 PRINTS PR00344 Bacterial sensor protein C-terminal signature 998 1012 3.2E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_00350 2287ccee5a8b9a5c9a932a7d5fab42d9 1586 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1016 1026 3.2E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_00350 2287ccee5a8b9a5c9a932a7d5fab42d9 1586 Pfam PF00072 Response regulator receiver domain 1091 1209 3.5E-12 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_00350 2287ccee5a8b9a5c9a932a7d5fab42d9 1586 Pfam PF00072 Response regulator receiver domain 1242 1354 4.7E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_00350 2287ccee5a8b9a5c9a932a7d5fab42d9 1586 SUPERFAMILY SSF47384 826 907 2.16E-19 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL543_12890 1baa057756f3106d4e6e0e57e36f0f74 301 Gene3D G3DSA:3.40.190.10 98 297 3.6E-55 T 11-10-2018 AL543_12890 1baa057756f3106d4e6e0e57e36f0f74 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 68 5.3E-14 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_12890 1baa057756f3106d4e6e0e57e36f0f74 301 Gene3D G3DSA:1.10.10.10 2 89 7.0E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_12890 1baa057756f3106d4e6e0e57e36f0f74 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 7.8E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_12890 1baa057756f3106d4e6e0e57e36f0f74 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 7.8E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_12890 1baa057756f3106d4e6e0e57e36f0f74 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 7.8E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_12890 1baa057756f3106d4e6e0e57e36f0f74 301 SUPERFAMILY SSF46785 4 117 2.95E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_12890 1baa057756f3106d4e6e0e57e36f0f74 301 Pfam PF03466 LysR substrate binding domain 96 299 1.5E-38 T 11-10-2018 IPR005119 LysR, substrate-binding AL543_12890 1baa057756f3106d4e6e0e57e36f0f74 301 Gene3D G3DSA:3.40.190.10 168 269 3.6E-55 T 11-10-2018 AL543_12890 1baa057756f3106d4e6e0e57e36f0f74 301 SUPERFAMILY SSF53850 96 300 8.11E-36 T 11-10-2018 AL543_10425 53fe133ca9232b1139a95a4a7ee41657 711 PIRSF PIRSF009393 1 711 6.7E-288 T 11-10-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 AL543_10425 53fe133ca9232b1139a95a4a7ee41657 711 Gene3D G3DSA:3.40.640.10 130 424 3.1E-91 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL543_10425 53fe133ca9232b1139a95a4a7ee41657 711 Gene3D G3DSA:3.40.50.2300 1 129 2.4E-52 T 11-10-2018 AL543_10425 53fe133ca9232b1139a95a4a7ee41657 711 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 130 545 3.5E-187 T 11-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AL543_10425 53fe133ca9232b1139a95a4a7ee41657 711 SUPERFAMILY SSF55904 567 708 2.09E-42 T 11-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 AL543_10425 53fe133ca9232b1139a95a4a7ee41657 711 Gene3D G3DSA:3.90.100.10 595 711 3.5E-44 T 11-10-2018 AL543_10425 53fe133ca9232b1139a95a4a7ee41657 711 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 570 700 1.4E-44 T 11-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AL543_10425 53fe133ca9232b1139a95a4a7ee41657 711 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 362 376 - T 11-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AL543_10425 53fe133ca9232b1139a95a4a7ee41657 711 SUPERFAMILY SSF53383 130 562 1.12E-106 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL543_10425 53fe133ca9232b1139a95a4a7ee41657 711 Gene3D G3DSA:3.90.1150.10 425 594 7.9E-71 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL543_10425 53fe133ca9232b1139a95a4a7ee41657 711 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 14 124 9.4E-29 T 11-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 AL543_05650 4ea51fd5d9130191529f10740a65d608 642 Gene3D G3DSA:3.30.54.20 131 188 2.0E-62 T 11-10-2018 AL543_05650 4ea51fd5d9130191529f10740a65d608 642 SUPERFAMILY SSF81271 3 61 8.83E-15 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AL543_05650 4ea51fd5d9130191529f10740a65d608 642 Gene3D G3DSA:3.40.50.800 533 642 3.0E-32 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily AL543_05650 4ea51fd5d9130191529f10740a65d608 642 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 73 632 1.6E-240 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AL543_05650 4ea51fd5d9130191529f10740a65d608 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 67 635 34.182 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AL543_05650 4ea51fd5d9130191529f10740a65d608 642 Gene3D G3DSA:3.10.20.30 3 62 8.6E-22 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AL543_05650 4ea51fd5d9130191529f10740a65d608 642 SUPERFAMILY SSF55186 65 242 3.79E-62 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 AL543_05650 4ea51fd5d9130191529f10740a65d608 642 Gene3D G3DSA:3.30.930.10 224 532 3.5E-128 T 11-10-2018 AL543_05650 4ea51fd5d9130191529f10740a65d608 642 Pfam PF02824 TGS domain 4 61 4.4E-11 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 AL543_05650 4ea51fd5d9130191529f10740a65d608 642 Pfam PF03129 Anticodon binding domain 542 631 2.1E-22 T 11-10-2018 IPR004154 Anticodon-binding AL543_05650 4ea51fd5d9130191529f10740a65d608 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 330 358 7.0E-54 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AL543_05650 4ea51fd5d9130191529f10740a65d608 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 465 493 7.0E-54 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AL543_05650 4ea51fd5d9130191529f10740a65d608 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 535 547 7.0E-54 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AL543_05650 4ea51fd5d9130191529f10740a65d608 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 363 386 7.0E-54 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AL543_05650 4ea51fd5d9130191529f10740a65d608 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 508 521 7.0E-54 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AL543_05650 4ea51fd5d9130191529f10740a65d608 642 SMART SM00863 171 220 4.1E-19 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 AL543_05650 4ea51fd5d9130191529f10740a65d608 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 319 530 8.0E-49 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL543_05650 4ea51fd5d9130191529f10740a65d608 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 173 220 9.9E-14 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 AL543_05650 4ea51fd5d9130191529f10740a65d608 642 SUPERFAMILY SSF55681 244 527 5.94E-98 T 11-10-2018 AL543_05650 4ea51fd5d9130191529f10740a65d608 642 Gene3D G3DSA:3.30.980.10 70 223 2.0E-62 T 11-10-2018 AL543_05650 4ea51fd5d9130191529f10740a65d608 642 SUPERFAMILY SSF52954 530 635 3.62E-32 T 11-10-2018 AL543_20285 8598cb01da61a3e1831957f5f3b6c714 397 Gene3D G3DSA:1.20.1330.10 42 216 1.9E-32 T 11-10-2018 AL543_20285 8598cb01da61a3e1831957f5f3b6c714 397 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 142 1.7E-9 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL543_20285 8598cb01da61a3e1831957f5f3b6c714 397 SUPERFAMILY SSF64518 1 397 6.67E-63 T 11-10-2018 AL543_20285 8598cb01da61a3e1831957f5f3b6c714 397 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 4 397 5.9E-108 T 11-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 AL543_20285 8598cb01da61a3e1831957f5f3b6c714 397 Gene3D G3DSA:1.20.1330.10 264 373 2.6E-9 T 11-10-2018 AL543_08385 0786d8bec5715f3961795c4213bbf0af 438 Pfam PF00672 HAMP domain 173 221 4.4E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_08385 0786d8bec5715f3961795c4213bbf0af 438 Gene3D G3DSA:1.10.287.130 171 281 4.7E-23 T 11-10-2018 AL543_08385 0786d8bec5715f3961795c4213bbf0af 438 SUPERFAMILY SSF47384 220 281 3.73E-12 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL543_08385 0786d8bec5715f3961795c4213bbf0af 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 390 5.9E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_08385 0786d8bec5715f3961795c4213bbf0af 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 376 5.9E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_08385 0786d8bec5715f3961795c4213bbf0af 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 413 5.9E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_08385 0786d8bec5715f3961795c4213bbf0af 438 SMART SM00388 226 286 2.4E-10 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_08385 0786d8bec5715f3961795c4213bbf0af 438 SMART SM00304 173 225 2.7E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_08385 0786d8bec5715f3961795c4213bbf0af 438 SUPERFAMILY SSF55874 289 434 5.63E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_08385 0786d8bec5715f3961795c4213bbf0af 438 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 326 433 3.8E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_08385 0786d8bec5715f3961795c4213bbf0af 438 SMART SM00387 325 435 6.5E-30 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_08385 0786d8bec5715f3961795c4213bbf0af 438 Pfam PF00512 His Kinase A (phospho-acceptor) domain 229 280 4.5E-10 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_08385 0786d8bec5715f3961795c4213bbf0af 438 Gene3D G3DSA:3.30.565.10 288 438 2.1E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_12530 7868ff29284f0db71408808f85481b75 511 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 1 467 19.139 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL543_12530 7868ff29284f0db71408808f85481b75 511 Pfam PF03023 MviN-like protein 21 471 4.0E-145 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL543_12530 7868ff29284f0db71408808f85481b75 511 PRINTS PR01806 Virulence factor MviN signature 45 61 5.4E-78 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL543_12530 7868ff29284f0db71408808f85481b75 511 PRINTS PR01806 Virulence factor MviN signature 26 45 5.4E-78 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL543_12530 7868ff29284f0db71408808f85481b75 511 PRINTS PR01806 Virulence factor MviN signature 133 157 5.4E-78 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL543_12530 7868ff29284f0db71408808f85481b75 511 PRINTS PR01806 Virulence factor MviN signature 157 178 5.4E-78 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL543_12530 7868ff29284f0db71408808f85481b75 511 PRINTS PR01806 Virulence factor MviN signature 357 376 5.4E-78 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL543_12530 7868ff29284f0db71408808f85481b75 511 PRINTS PR01806 Virulence factor MviN signature 259 285 5.4E-78 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL543_12530 7868ff29284f0db71408808f85481b75 511 PRINTS PR01806 Virulence factor MviN signature 409 426 5.4E-78 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL543_12530 7868ff29284f0db71408808f85481b75 511 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 502 5.0E-134 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL543_12530 7868ff29284f0db71408808f85481b75 511 PIRSF PIRSF002869 1 509 2.2E-147 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL543_15430 1d7f67091266e56d2ec31e1265ff12ea 795 Gene3D G3DSA:3.30.56.10 7 179 9.0E-70 T 11-10-2018 AL543_15430 1d7f67091266e56d2ec31e1265ff12ea 795 Gene3D G3DSA:3.50.40.10 197 394 8.0E-83 T 11-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 AL543_15430 1d7f67091266e56d2ec31e1265ff12ea 795 SUPERFAMILY SSF55681 467 689 1.34E-54 T 11-10-2018 AL543_15430 1d7f67091266e56d2ec31e1265ff12ea 795 SUPERFAMILY SSF56037 196 394 3.4E-78 T 11-10-2018 AL543_15430 1d7f67091266e56d2ec31e1265ff12ea 795 Pfam PF03483 B3/4 domain 212 385 2.2E-72 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AL543_15430 1d7f67091266e56d2ec31e1265ff12ea 795 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 794 2.2E-280 T 11-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AL543_15430 1d7f67091266e56d2ec31e1265ff12ea 795 Pfam PF03484 tRNA synthetase B5 domain 406 471 3.0E-19 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AL543_15430 1d7f67091266e56d2ec31e1265ff12ea 795 SUPERFAMILY SSF54991 697 794 4.58E-30 T 11-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 AL543_15430 1d7f67091266e56d2ec31e1265ff12ea 795 Gene3D G3DSA:3.30.930.10 486 691 2.4E-64 T 11-10-2018 AL543_15430 1d7f67091266e56d2ec31e1265ff12ea 795 Pfam PF01588 Putative tRNA binding domain 45 145 5.5E-26 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 AL543_15430 1d7f67091266e56d2ec31e1265ff12ea 795 SMART SM00873 212 385 1.2E-99 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AL543_15430 1d7f67091266e56d2ec31e1265ff12ea 795 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 788 46.723 T 11-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AL543_15430 1d7f67091266e56d2ec31e1265ff12ea 795 SUPERFAMILY SSF46955 403 475 8.79E-20 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AL543_15430 1d7f67091266e56d2ec31e1265ff12ea 795 SUPERFAMILY SSF50249 40 190 6.61E-47 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL543_15430 1d7f67091266e56d2ec31e1265ff12ea 795 Gene3D G3DSA:2.40.50.140 39 154 9.0E-70 T 11-10-2018 AL543_15430 1d7f67091266e56d2ec31e1265ff12ea 795 Pfam PF03147 Ferredoxin-fold anticodon binding domain 701 794 1.1E-28 T 11-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 AL543_15430 1d7f67091266e56d2ec31e1265ff12ea 795 Gene3D G3DSA:3.30.70.380 702 795 5.8E-29 T 11-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 AL543_15430 1d7f67091266e56d2ec31e1265ff12ea 795 Gene3D G3DSA:3.30.56.10 403 475 4.5E-26 T 11-10-2018 AL543_15430 1d7f67091266e56d2ec31e1265ff12ea 795 SMART SM00874 403 471 9.3E-30 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AL543_15430 1d7f67091266e56d2ec31e1265ff12ea 795 SMART SM00896 701 794 4.9E-45 T 11-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 AL543_04195 627ae55b913cfa9ea4291e8fbc9e8a17 131 Gene3D G3DSA:3.30.1330.80 1 131 2.7E-51 T 11-10-2018 AL543_04195 627ae55b913cfa9ea4291e8fbc9e8a17 131 SUPERFAMILY SSF117856 3 129 7.59E-37 T 11-10-2018 AL543_04195 627ae55b913cfa9ea4291e8fbc9e8a17 131 Pfam PF03479 Domain of unknown function (DUF296) 5 108 8.1E-26 T 11-10-2018 IPR005175 PPC domain AL543_12435 d5f1dc4ba5b6b4e18f0813796d4d69cc 437 Pfam PF05525 Branched-chain amino acid transport protein 8 425 1.4E-156 T 11-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 AL543_12435 d5f1dc4ba5b6b4e18f0813796d4d69cc 437 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 413 3.0E-133 T 11-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 AL543_08285 53d90401a7e819f089f12906e33f078c 296 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 12 287 7.5E-68 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AL543_08285 53d90401a7e819f089f12906e33f078c 296 Pfam PF01545 Cation efflux family 15 206 5.9E-41 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AL543_08285 53d90401a7e819f089f12906e33f078c 296 SUPERFAMILY SSF160240 210 287 1.44E-23 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 AL543_08285 53d90401a7e819f089f12906e33f078c 296 Gene3D G3DSA:3.30.70.1350 207 290 1.2E-30 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 AL543_08285 53d90401a7e819f089f12906e33f078c 296 SUPERFAMILY SSF161111 8 207 9.02E-51 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AL543_08285 53d90401a7e819f089f12906e33f078c 296 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 286 3.3E-26 T 11-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain AL543_08285 53d90401a7e819f089f12906e33f078c 296 Gene3D G3DSA:1.20.1510.10 8 206 1.4E-59 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AL543_16990 82c045ead8905ad540bb9dca9baea5fe 206 SUPERFAMILY SSF74653 118 194 9.68E-24 T 11-10-2018 AL543_16990 82c045ead8905ad540bb9dca9baea5fe 206 Gene3D G3DSA:3.30.1150.10 103 206 5.3E-29 T 11-10-2018 AL543_16990 82c045ead8905ad540bb9dca9baea5fe 206 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 126 204 3.4E-19 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 AL543_16990 82c045ead8905ad540bb9dca9baea5fe 206 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 127 204 2.1E-19 T 11-10-2018 IPR006260 TonB/TolA, C-terminal AL543_16990 82c045ead8905ad540bb9dca9baea5fe 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 121 142 5.0E-12 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AL543_16990 82c045ead8905ad540bb9dca9baea5fe 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 142 160 5.0E-12 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AL543_16990 82c045ead8905ad540bb9dca9baea5fe 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 161 178 5.0E-12 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AL543_20120 70c9f923610c17c5c44def632e42279f 417 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 319 339 - T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AL543_20120 70c9f923610c17c5c44def632e42279f 417 Pfam PF00860 Permease family 3 371 4.3E-92 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 AL543_20120 70c9f923610c17c5c44def632e42279f 417 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 3 395 4.8E-112 T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AL543_15755 5e5db68cbe312d706281fcc479cd085a 427 SUPERFAMILY SSF51055 383 426 9.16E-14 T 11-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL543_15755 5e5db68cbe312d706281fcc479cd085a 427 SUPERFAMILY SSF88713 24 334 1.14E-26 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AL543_15755 5e5db68cbe312d706281fcc479cd085a 427 SMART SM00495 381 427 1.7 T 11-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL543_15755 5e5db68cbe312d706281fcc479cd085a 427 SMART SM00495 332 378 0.002 T 11-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL543_15755 5e5db68cbe312d706281fcc479cd085a 427 SUPERFAMILY SSF51055 335 377 4.45E-12 T 11-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL543_15755 5e5db68cbe312d706281fcc479cd085a 427 Gene3D G3DSA:2.10.10.90 333 427 6.0E-34 T 11-10-2018 AL543_15755 5e5db68cbe312d706281fcc479cd085a 427 Gene3D G3DSA:3.20.20.370 27 332 5.7E-102 T 11-10-2018 AL543_15755 5e5db68cbe312d706281fcc479cd085a 427 Pfam PF01522 Polysaccharide deacetylase 25 129 2.4E-12 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AL543_16895 23280aed0d0eaae0d6be697fa83a6a62 484 SUPERFAMILY SSF52540 155 384 6.98E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_16895 23280aed0d0eaae0d6be697fa83a6a62 484 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 240 255 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL543_16895 23280aed0d0eaae0d6be697fa83a6a62 484 Pfam PF00158 Sigma-54 interaction domain 155 321 3.0E-67 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL543_16895 23280aed0d0eaae0d6be697fa83a6a62 484 SUPERFAMILY SSF52172 14 199 1.71E-39 T 11-10-2018 IPR011006 CheY-like superfamily AL543_16895 23280aed0d0eaae0d6be697fa83a6a62 484 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 367 376 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AL543_16895 23280aed0d0eaae0d6be697fa83a6a62 484 SMART SM00448 16 127 5.7E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_16895 23280aed0d0eaae0d6be697fa83a6a62 484 Gene3D G3DSA:1.10.10.60 429 474 3.0E-12 T 11-10-2018 AL543_16895 23280aed0d0eaae0d6be697fa83a6a62 484 Gene3D G3DSA:1.10.8.60 326 414 2.4E-16 T 11-10-2018 AL543_16895 23280aed0d0eaae0d6be697fa83a6a62 484 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 179 192 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL543_16895 23280aed0d0eaae0d6be697fa83a6a62 484 SMART SM00382 175 318 9.4E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_16895 23280aed0d0eaae0d6be697fa83a6a62 484 Pfam PF00072 Response regulator receiver domain 18 128 1.7E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_16895 23280aed0d0eaae0d6be697fa83a6a62 484 Pfam PF02954 Bacterial regulatory protein, Fis family 435 475 2.9E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL543_16895 23280aed0d0eaae0d6be697fa83a6a62 484 Gene3D G3DSA:3.40.50.300 146 325 7.3E-63 T 11-10-2018 AL543_16895 23280aed0d0eaae0d6be697fa83a6a62 484 SUPERFAMILY SSF46689 427 475 3.58E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_16895 23280aed0d0eaae0d6be697fa83a6a62 484 Gene3D G3DSA:3.40.50.2300 14 145 5.0E-32 T 11-10-2018 AL543_07215 ffaa085f6962b9a73bc409d10aaaee77 218 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 33.876 T 11-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 AL543_07215 ffaa085f6962b9a73bc409d10aaaee77 218 Gene3D G3DSA:3.40.50.1360 7 207 2.7E-80 T 11-10-2018 AL543_07215 ffaa085f6962b9a73bc409d10aaaee77 218 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 1.1E-58 T 11-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 AL543_07215 ffaa085f6962b9a73bc409d10aaaee77 218 SUPERFAMILY SSF75445 127 198 4.58E-24 T 11-10-2018 AL543_07215 ffaa085f6962b9a73bc409d10aaaee77 218 Gene3D G3DSA:3.30.70.260 125 196 2.7E-80 T 11-10-2018 AL543_07215 ffaa085f6962b9a73bc409d10aaaee77 218 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 214 3.1E-69 T 11-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 AL543_07215 ffaa085f6962b9a73bc409d10aaaee77 218 SUPERFAMILY SSF100950 1 146 1.07E-47 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AL543_20415 6acee677775263ddc53b840655377b3b 146 Pfam PF04214 Protein of unknown function, DUF 48 117 3.4E-32 T 11-10-2018 IPR007332 Protein of unknown function DUF411 AL543_20470 f2b05d103897161a5b818c7ce9c1edac 191 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 37.971 T 11-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 AL543_20470 f2b05d103897161a5b818c7ce9c1edac 191 SUPERFAMILY SSF53697 1 188 5.06E-52 T 11-10-2018 AL543_20470 f2b05d103897161a5b818c7ce9c1edac 191 Pfam PF13580 SIS domain 14 146 4.1E-30 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL543_20470 f2b05d103897161a5b818c7ce9c1edac 191 Gene3D G3DSA:3.40.50.10490 1 191 1.6E-71 T 11-10-2018 AL543_20470 f2b05d103897161a5b818c7ce9c1edac 191 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 34 187 1.6E-82 T 11-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 AL543_00995 ffccc4e11afb78485c12d95f2b6251bd 300 SUPERFAMILY SSF46785 15 96 1.2E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_00995 ffccc4e11afb78485c12d95f2b6251bd 300 Gene3D G3DSA:3.40.190.290 102 299 1.2E-59 T 11-10-2018 AL543_00995 ffccc4e11afb78485c12d95f2b6251bd 300 SUPERFAMILY SSF53850 101 299 1.99E-43 T 11-10-2018 AL543_00995 ffccc4e11afb78485c12d95f2b6251bd 300 Gene3D G3DSA:1.10.10.10 14 99 5.9E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_00995 ffccc4e11afb78485c12d95f2b6251bd 300 Pfam PF03466 LysR substrate binding domain 99 299 3.6E-42 T 11-10-2018 IPR005119 LysR, substrate-binding AL543_00995 ffccc4e11afb78485c12d95f2b6251bd 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 16 74 1.5E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_19885 da2e59ef9fff9d42c67f13e61055c4f6 310 Pfam PF05175 Methyltransferase small domain 134 217 2.5E-18 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 AL543_19885 da2e59ef9fff9d42c67f13e61055c4f6 310 SUPERFAMILY SSF53335 16 293 6.27E-50 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL543_19885 da2e59ef9fff9d42c67f13e61055c4f6 310 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 299 2.1E-97 T 11-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 AL543_19885 da2e59ef9fff9d42c67f13e61055c4f6 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 300 53.201 T 11-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 AL543_19885 da2e59ef9fff9d42c67f13e61055c4f6 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AL543_19885 da2e59ef9fff9d42c67f13e61055c4f6 310 Gene3D G3DSA:1.10.8.10 16 102 5.4E-6 T 11-10-2018 AL543_19885 da2e59ef9fff9d42c67f13e61055c4f6 310 Gene3D G3DSA:3.40.50.150 103 281 1.5E-47 T 11-10-2018 AL543_19885 da2e59ef9fff9d42c67f13e61055c4f6 310 PIRSF PIRSF037167 2 307 7.7E-149 T 11-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 AL543_19885 da2e59ef9fff9d42c67f13e61055c4f6 310 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 295 3.3E-137 T 11-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 AL543_13675 253e0c77d8a7a8fc5a8f4b3a1fdba1a7 562 SMART SM00642 18 419 2.1E-164 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL543_13675 253e0c77d8a7a8fc5a8f4b3a1fdba1a7 562 Gene3D G3DSA:2.60.40.1180 481 561 1.6E-13 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta AL543_13675 253e0c77d8a7a8fc5a8f4b3a1fdba1a7 562 Gene3D G3DSA:3.20.20.80 175 480 1.1E-114 T 11-10-2018 AL543_13675 253e0c77d8a7a8fc5a8f4b3a1fdba1a7 562 SUPERFAMILY SSF51011 480 558 9.89E-14 T 11-10-2018 AL543_13675 253e0c77d8a7a8fc5a8f4b3a1fdba1a7 562 Pfam PF00128 Alpha amylase, catalytic domain 33 375 8.0E-130 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL543_13675 253e0c77d8a7a8fc5a8f4b3a1fdba1a7 562 Gene3D G3DSA:3.20.20.80 2 111 2.0E-51 T 11-10-2018 AL543_13675 253e0c77d8a7a8fc5a8f4b3a1fdba1a7 562 SUPERFAMILY SSF51445 8 476 7.05E-163 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AL543_13675 253e0c77d8a7a8fc5a8f4b3a1fdba1a7 562 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 10 556 1.4E-263 T 11-10-2018 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 AL543_13675 253e0c77d8a7a8fc5a8f4b3a1fdba1a7 562 Gene3D G3DSA:3.90.400.10 112 174 5.0E-30 T 11-10-2018 AL543_17895 df66deb6d31a4cfbbf2749eec713ae0e 234 Gene3D G3DSA:3.40.50.2300 1 133 2.3E-33 T 11-10-2018 AL543_17895 df66deb6d31a4cfbbf2749eec713ae0e 234 SMART SM00448 3 113 2.2E-36 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_17895 df66deb6d31a4cfbbf2749eec713ae0e 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 231 2.2E-20 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL543_17895 df66deb6d31a4cfbbf2749eec713ae0e 234 SMART SM00862 155 231 1.1E-19 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL543_17895 df66deb6d31a4cfbbf2749eec713ae0e 234 Gene3D G3DSA:1.10.10.10 134 234 1.7E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_17895 df66deb6d31a4cfbbf2749eec713ae0e 234 Pfam PF00072 Response regulator receiver domain 5 113 3.4E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_17895 df66deb6d31a4cfbbf2749eec713ae0e 234 SUPERFAMILY SSF52172 3 183 5.89E-36 T 11-10-2018 IPR011006 CheY-like superfamily AL543_18650 e86450be72b2468d128d64397150e5d8 947 Pfam PF01580 FtsK/SpoIIIE family 562 775 7.0E-71 T 11-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 AL543_18650 e86450be72b2468d128d64397150e5d8 947 Gene3D G3DSA:1.10.10.10 873 940 2.7E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_18650 e86450be72b2468d128d64397150e5d8 947 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 28 199 1.2E-41 T 11-10-2018 IPR025199 DNA translocase FtsK, 4TM region AL543_18650 e86450be72b2468d128d64397150e5d8 947 SUPERFAMILY SSF46785 879 942 7.48E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_18650 e86450be72b2468d128d64397150e5d8 947 SMART SM00843 879 944 5.3E-39 T 11-10-2018 IPR018541 FtsK gamma domain AL543_18650 e86450be72b2468d128d64397150e5d8 947 Gene3D G3DSA:3.30.980.40 454 558 1.0E-32 T 11-10-2018 AL543_18650 e86450be72b2468d128d64397150e5d8 947 Pfam PF09397 Ftsk gamma domain 881 941 1.3E-25 T 11-10-2018 IPR018541 FtsK gamma domain AL543_18650 e86450be72b2468d128d64397150e5d8 947 SUPERFAMILY SSF52540 536 848 5.31E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_18650 e86450be72b2468d128d64397150e5d8 947 Gene3D G3DSA:3.40.50.300 559 861 5.1E-120 T 11-10-2018 AL543_05565 3616977573083d933d49e2c329d7a09d 157 Pfam PF04229 GrpB protein 7 155 2.5E-21 T 11-10-2018 IPR007344 GrpB/Dephospho-CoA kinase AL543_05565 3616977573083d933d49e2c329d7a09d 157 SUPERFAMILY SSF81301 8 157 1.9E-31 T 11-10-2018 AL543_05565 3616977573083d933d49e2c329d7a09d 157 Gene3D G3DSA:3.30.460.10 4 157 5.3E-20 T 11-10-2018 AL543_05220 3616977573083d933d49e2c329d7a09d 157 Pfam PF04229 GrpB protein 7 155 2.5E-21 T 11-10-2018 IPR007344 GrpB/Dephospho-CoA kinase AL543_05220 3616977573083d933d49e2c329d7a09d 157 SUPERFAMILY SSF81301 8 157 1.9E-31 T 11-10-2018 AL543_05220 3616977573083d933d49e2c329d7a09d 157 Gene3D G3DSA:3.30.460.10 4 157 5.3E-20 T 11-10-2018 AL543_04825 3616977573083d933d49e2c329d7a09d 157 Pfam PF04229 GrpB protein 7 155 2.5E-21 T 11-10-2018 IPR007344 GrpB/Dephospho-CoA kinase AL543_04825 3616977573083d933d49e2c329d7a09d 157 SUPERFAMILY SSF81301 8 157 1.9E-31 T 11-10-2018 AL543_04825 3616977573083d933d49e2c329d7a09d 157 Gene3D G3DSA:3.30.460.10 4 157 5.3E-20 T 11-10-2018 AL543_19830 be365cd601577bd11034a292496b445a 150 Gene3D G3DSA:3.30.1490.190 85 142 4.5E-23 T 11-10-2018 AL543_19830 be365cd601577bd11034a292496b445a 150 Pfam PF01475 Ferric uptake regulator family 11 130 4.0E-47 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AL543_19830 be365cd601577bd11034a292496b445a 150 Gene3D G3DSA:1.10.10.10 1 84 3.6E-35 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_19830 be365cd601577bd11034a292496b445a 150 SUPERFAMILY SSF46785 5 134 9.54E-44 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_10840 dc9b612198cb9902e0ad8a95918165c7 87 Gene3D G3DSA:2.30.30.100 1 72 4.7E-35 T 11-10-2018 AL543_10840 dc9b612198cb9902e0ad8a95918165c7 87 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.727 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AL543_10840 dc9b612198cb9902e0ad8a95918165c7 87 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 6.8E-30 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AL543_10840 dc9b612198cb9902e0ad8a95918165c7 87 Pfam PF17209 Hfq protein 7 69 1.7E-31 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AL543_10840 dc9b612198cb9902e0ad8a95918165c7 87 SUPERFAMILY SSF50182 7 69 1.19E-24 T 11-10-2018 IPR010920 LSM domain superfamily AL543_11265 20aefcc32a861b2afb34db343fe58f18 351 Pfam PF00970 Oxidoreductase FAD-binding domain 16 107 1.7E-15 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 AL543_11265 20aefcc32a861b2afb34db343fe58f18 351 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 274 342 5.9E-14 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL543_11265 20aefcc32a861b2afb34db343fe58f18 351 Gene3D G3DSA:3.10.20.30 263 351 1.7E-21 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AL543_11265 20aefcc32a861b2afb34db343fe58f18 351 Pfam PF00175 Oxidoreductase NAD-binding domain 120 228 2.8E-13 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AL543_11265 20aefcc32a861b2afb34db343fe58f18 351 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 161 172 7.7E-6 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL543_11265 20aefcc32a861b2afb34db343fe58f18 351 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 119 138 7.7E-6 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL543_11265 20aefcc32a861b2afb34db343fe58f18 351 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 214 222 7.7E-6 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL543_11265 20aefcc32a861b2afb34db343fe58f18 351 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 59 66 7.7E-6 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL543_11265 20aefcc32a861b2afb34db343fe58f18 351 SUPERFAMILY SSF52343 114 247 1.57E-32 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AL543_11265 20aefcc32a861b2afb34db343fe58f18 351 Gene3D G3DSA:3.40.50.80 112 254 1.0E-31 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AL543_11265 20aefcc32a861b2afb34db343fe58f18 351 SUPERFAMILY SSF54292 237 349 7.73E-26 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AL543_11265 20aefcc32a861b2afb34db343fe58f18 351 PRINTS PR00410 Phenol hydroxylase reductase family signature 214 222 7.0E-6 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL543_11265 20aefcc32a861b2afb34db343fe58f18 351 PRINTS PR00410 Phenol hydroxylase reductase family signature 40 52 7.0E-6 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL543_11265 20aefcc32a861b2afb34db343fe58f18 351 PRINTS PR00410 Phenol hydroxylase reductase family signature 119 138 7.0E-6 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL543_11265 20aefcc32a861b2afb34db343fe58f18 351 SUPERFAMILY SSF63380 11 108 2.89E-25 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AL543_11265 20aefcc32a861b2afb34db343fe58f18 351 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 300 308 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AL543_11265 20aefcc32a861b2afb34db343fe58f18 351 Gene3D G3DSA:2.40.30.10 6 108 7.0E-27 T 11-10-2018 AL543_14690 fa75917ecdaeae211ef9c471bd76853f 181 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 43 178 7.1E-38 T 11-10-2018 IPR005247 YbhB/YbcL AL543_14690 fa75917ecdaeae211ef9c471bd76853f 181 SUPERFAMILY SSF49777 24 179 1.44E-49 T 11-10-2018 IPR036610 PEBP-like superfamily AL543_14690 fa75917ecdaeae211ef9c471bd76853f 181 Gene3D G3DSA:3.90.280.10 16 179 3.5E-52 T 11-10-2018 IPR036610 PEBP-like superfamily AL543_14690 fa75917ecdaeae211ef9c471bd76853f 181 Pfam PF01161 Phosphatidylethanolamine-binding protein 47 178 5.9E-36 T 11-10-2018 IPR008914 Phosphatidylethanolamine-binding protein AL543_12000 ad029b759fcf4568cb5ce2a490ae987c 197 Gene3D G3DSA:2.102.10.10 43 190 3.7E-47 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AL543_12000 ad029b759fcf4568cb5ce2a490ae987c 197 SUPERFAMILY SSF50022 30 194 6.5E-44 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AL543_12000 ad029b759fcf4568cb5ce2a490ae987c 197 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 5 40 8.0E-14 T 11-10-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 AL543_12000 ad029b759fcf4568cb5ce2a490ae987c 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 149 161 1.3E-7 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 AL543_12000 ad029b759fcf4568cb5ce2a490ae987c 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 119 130 1.3E-7 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 AL543_12000 ad029b759fcf4568cb5ce2a490ae987c 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 162 174 1.3E-7 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 AL543_12000 ad029b759fcf4568cb5ce2a490ae987c 197 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 9 190 1.0E-75 T 11-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 AL543_12000 ad029b759fcf4568cb5ce2a490ae987c 197 Pfam PF00355 Rieske [2Fe-2S] domain 54 174 7.1E-12 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL543_17990 d7be6e5fbcca019d6ddd2eae1b83185a 224 SUPERFAMILY SSF46689 20 89 7.18E-18 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_17990 d7be6e5fbcca019d6ddd2eae1b83185a 224 Pfam PF00440 Bacterial regulatory proteins, tetR family 27 73 3.6E-12 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL543_17990 d7be6e5fbcca019d6ddd2eae1b83185a 224 SUPERFAMILY SSF48498 96 223 9.78E-43 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AL543_17990 d7be6e5fbcca019d6ddd2eae1b83185a 224 ProSitePatterns PS01081 TetR-type HTH domain signature. 39 70 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AL543_17990 d7be6e5fbcca019d6ddd2eae1b83185a 224 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 40 7.2E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL543_17990 d7be6e5fbcca019d6ddd2eae1b83185a 224 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 48 71 7.2E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL543_17990 d7be6e5fbcca019d6ddd2eae1b83185a 224 Gene3D G3DSA:1.10.357.10 18 224 1.0E-55 T 11-10-2018 AL543_11790 90671b2fb088457cf9efdde21eef9104 862 Gene3D G3DSA:3.40.1170.10 7 129 4.3E-52 T 11-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 AL543_11790 90671b2fb088457cf9efdde21eef9104 862 Pfam PF05188 MutS domain II 136 261 2.1E-32 T 11-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 AL543_11790 90671b2fb088457cf9efdde21eef9104 862 PIRSF PIRSF037677 7 835 8.9E-160 T 11-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 AL543_11790 90671b2fb088457cf9efdde21eef9104 862 Gene3D G3DSA:1.10.1420.10 394 510 2.0E-106 T 11-10-2018 AL543_11790 90671b2fb088457cf9efdde21eef9104 862 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 15 860 0.0 T 11-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 AL543_11790 90671b2fb088457cf9efdde21eef9104 862 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 15 854 25.311 T 11-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 AL543_11790 90671b2fb088457cf9efdde21eef9104 862 SUPERFAMILY SSF53150 122 274 9.42E-41 T 11-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 AL543_11790 90671b2fb088457cf9efdde21eef9104 862 SUPERFAMILY SSF52540 574 804 5.63E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_11790 90671b2fb088457cf9efdde21eef9104 862 Gene3D G3DSA:3.40.50.300 575 860 1.6E-99 T 11-10-2018 AL543_11790 90671b2fb088457cf9efdde21eef9104 862 Pfam PF01624 MutS domain I 16 127 1.8E-41 T 11-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 AL543_11790 90671b2fb088457cf9efdde21eef9104 862 Gene3D G3DSA:3.30.420.110 135 269 7.9E-36 T 11-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 AL543_11790 90671b2fb088457cf9efdde21eef9104 862 SMART SM00534 614 801 2.9E-121 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AL543_11790 90671b2fb088457cf9efdde21eef9104 862 Pfam PF00488 MutS domain V 617 804 4.0E-86 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AL543_11790 90671b2fb088457cf9efdde21eef9104 862 Pfam PF05192 MutS domain III 277 566 5.1E-42 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AL543_11790 90671b2fb088457cf9efdde21eef9104 862 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 695 711 - T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AL543_11790 90671b2fb088457cf9efdde21eef9104 862 SMART SM00533 291 598 1.1E-110 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AL543_11790 90671b2fb088457cf9efdde21eef9104 862 Pfam PF05190 MutS family domain IV 435 525 2.0E-29 T 11-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 AL543_11790 90671b2fb088457cf9efdde21eef9104 862 SUPERFAMILY SSF48334 275 571 6.67E-93 T 11-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily AL543_11790 90671b2fb088457cf9efdde21eef9104 862 SUPERFAMILY SSF55271 8 123 5.75E-43 T 11-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 AL543_11790 90671b2fb088457cf9efdde21eef9104 862 Gene3D G3DSA:1.10.1420.10 274 566 2.0E-106 T 11-10-2018 AL543_18465 8a2528ff7945b3f1b87174ae6bddac03 626 SUPERFAMILY SSF58104 315 624 2.09E-62 T 11-10-2018 AL543_18465 8a2528ff7945b3f1b87174ae6bddac03 626 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 436 591 1.6E-39 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_18465 8a2528ff7945b3f1b87174ae6bddac03 626 SMART SM00283 364 625 4.7E-53 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_18465 8a2528ff7945b3f1b87174ae6bddac03 626 Gene3D G3DSA:1.10.287.950 295 614 4.5E-62 T 11-10-2018 AL543_18465 8a2528ff7945b3f1b87174ae6bddac03 626 SMART SM00304 295 349 5.9E-5 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_18465 8a2528ff7945b3f1b87174ae6bddac03 626 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 385 414 5.6E-22 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL543_18465 8a2528ff7945b3f1b87174ae6bddac03 626 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 491 520 5.6E-22 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL543_18465 8a2528ff7945b3f1b87174ae6bddac03 626 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 462 489 5.6E-22 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL543_15920 ad1dd09103f5602b012c31b165e78341 543 SMART SM00283 280 541 7.5E-71 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_15920 ad1dd09103f5602b012c31b165e78341 543 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 165 1.3E-18 T 11-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain AL543_15920 ad1dd09103f5602b012c31b165e78341 543 SUPERFAMILY SSF58104 235 542 3.27E-73 T 11-10-2018 AL543_15920 ad1dd09103f5602b012c31b165e78341 543 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 336 505 4.4E-40 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_15920 ad1dd09103f5602b012c31b165e78341 543 Gene3D G3DSA:1.10.287.950 211 543 2.7E-75 T 11-10-2018 AL543_15920 ad1dd09103f5602b012c31b165e78341 543 SMART SM00304 211 265 3.4E-5 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_16260 9f60ffd6f021603048bd9a6f9b82eb10 1309 Pfam PF04408 Helicase associated domain (HA2) 477 569 1.1E-18 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 AL543_16260 9f60ffd6f021603048bd9a6f9b82eb10 1309 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 633 709 3.5E-23 T 11-10-2018 IPR011709 Domain of unknown function DUF1605 AL543_16260 9f60ffd6f021603048bd9a6f9b82eb10 1309 Pfam PF00271 Helicase conserved C-terminal domain 300 414 3.2E-11 T 11-10-2018 IPR001650 Helicase, C-terminal AL543_16260 9f60ffd6f021603048bd9a6f9b82eb10 1309 Gene3D G3DSA:3.40.50.300 38 262 1.1E-77 T 11-10-2018 AL543_16260 9f60ffd6f021603048bd9a6f9b82eb10 1309 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 23 1307 0.0 T 11-10-2018 IPR010222 RNA helicase HrpA GO:0004004 AL543_16260 9f60ffd6f021603048bd9a6f9b82eb10 1309 Pfam PF00270 DEAD/DEAH box helicase 97 243 1.1E-8 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL543_16260 9f60ffd6f021603048bd9a6f9b82eb10 1309 SUPERFAMILY SSF52540 82 616 1.53E-114 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_16260 9f60ffd6f021603048bd9a6f9b82eb10 1309 SMART SM00490 315 415 6.7E-15 T 11-10-2018 IPR001650 Helicase, C-terminal AL543_16260 9f60ffd6f021603048bd9a6f9b82eb10 1309 SMART SM00382 102 395 4.5E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_16260 9f60ffd6f021603048bd9a6f9b82eb10 1309 Pfam PF11898 Domain of unknown function (DUF3418) 723 1307 2.5E-230 T 11-10-2018 IPR024590 RNA helicase HrpA, C-terminal AL543_16260 9f60ffd6f021603048bd9a6f9b82eb10 1309 SMART SM00487 82 269 5.2E-31 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL543_16260 9f60ffd6f021603048bd9a6f9b82eb10 1309 SMART SM00847 475 570 1.7E-38 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 AL543_16260 9f60ffd6f021603048bd9a6f9b82eb10 1309 Gene3D G3DSA:1.20.120.1080 459 567 3.1E-19 T 11-10-2018 AL543_16260 9f60ffd6f021603048bd9a6f9b82eb10 1309 Gene3D G3DSA:3.40.50.300 263 432 2.9E-55 T 11-10-2018 AL543_20435 87b404e054e6d4ed1a8eb0c4ba1bff9b 46 Pfam PF11346 Protein of unknown function (DUF3149) 4 43 2.6E-16 T 11-10-2018 IPR021494 Protein of unknown function DUF3149 AL543_03520 61ca5b141f1824fe82ed3674b3e5bb01 486 SUPERFAMILY SSF52935 350 477 6.23E-21 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL543_03520 61ca5b141f1824fe82ed3674b3e5bb01 486 SUPERFAMILY SSF51621 3 347 5.1E-87 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AL543_03520 61ca5b141f1824fe82ed3674b3e5bb01 486 SUPERFAMILY SSF50800 71 168 2.79E-23 T 11-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily AL543_03520 61ca5b141f1824fe82ed3674b3e5bb01 486 Pfam PF02887 Pyruvate kinase, alpha/beta domain 381 474 1.7E-8 T 11-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL543_03520 61ca5b141f1824fe82ed3674b3e5bb01 486 Gene3D G3DSA:3.20.20.60 3 339 5.0E-141 T 11-10-2018 AL543_03520 61ca5b141f1824fe82ed3674b3e5bb01 486 Gene3D G3DSA:3.40.1380.20 340 473 5.0E-141 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL543_03520 61ca5b141f1824fe82ed3674b3e5bb01 486 PRINTS PR01050 Pyruvate kinase family signature 188 202 3.7E-53 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL543_03520 61ca5b141f1824fe82ed3674b3e5bb01 486 PRINTS PR01050 Pyruvate kinase family signature 221 247 3.7E-53 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL543_03520 61ca5b141f1824fe82ed3674b3e5bb01 486 PRINTS PR01050 Pyruvate kinase family signature 298 316 3.7E-53 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL543_03520 61ca5b141f1824fe82ed3674b3e5bb01 486 PRINTS PR01050 Pyruvate kinase family signature 59 75 3.7E-53 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL543_03520 61ca5b141f1824fe82ed3674b3e5bb01 486 PRINTS PR01050 Pyruvate kinase family signature 248 272 3.7E-53 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL543_03520 61ca5b141f1824fe82ed3674b3e5bb01 486 PRINTS PR01050 Pyruvate kinase family signature 317 333 3.7E-53 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL543_03520 61ca5b141f1824fe82ed3674b3e5bb01 486 PRINTS PR01050 Pyruvate kinase family signature 273 297 3.7E-53 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL543_03520 61ca5b141f1824fe82ed3674b3e5bb01 486 Gene3D G3DSA:2.40.33.10 70 170 5.0E-141 T 11-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL543_03520 61ca5b141f1824fe82ed3674b3e5bb01 486 Pfam PF00224 Pyruvate kinase, barrel domain 3 342 1.9E-126 T 11-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL543_03520 61ca5b141f1824fe82ed3674b3e5bb01 486 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 476 2.5E-148 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL543_19240 fdd2cdb57dc34671c0c088257c293184 337 Gene3D G3DSA:3.40.50.40 210 337 1.2E-45 T 11-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 AL543_19240 fdd2cdb57dc34671c0c088257c293184 337 Pfam PF00710 Asparaginase, N-terminal 5 192 5.4E-66 T 11-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 AL543_19240 fdd2cdb57dc34671c0c088257c293184 337 SUPERFAMILY SSF53774 3 336 9.16E-112 T 11-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 AL543_19240 fdd2cdb57dc34671c0c088257c293184 337 PRINTS PR00139 Asparaginase/glutaminase family signature 261 279 8.4E-17 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AL543_19240 fdd2cdb57dc34671c0c088257c293184 337 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 8.4E-17 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AL543_19240 fdd2cdb57dc34671c0c088257c293184 337 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 8.4E-17 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AL543_19240 fdd2cdb57dc34671c0c088257c293184 337 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 11-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 AL543_19240 fdd2cdb57dc34671c0c088257c293184 337 SMART SM00870 5 324 8.4E-139 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AL543_19240 fdd2cdb57dc34671c0c088257c293184 337 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 11-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 AL543_19240 fdd2cdb57dc34671c0c088257c293184 337 PIRSF PIRSF500176 2 333 2.2E-108 T 11-10-2018 AL543_19240 fdd2cdb57dc34671c0c088257c293184 337 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 4 336 9.3E-114 T 11-10-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 AL543_19240 fdd2cdb57dc34671c0c088257c293184 337 Gene3D G3DSA:3.40.50.1170 1 209 4.0E-94 T 11-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 AL543_19240 fdd2cdb57dc34671c0c088257c293184 337 PIRSF PIRSF001220 1 335 4.0E-94 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AL543_20175 d0843afe5f8d3aa50e9e6f768833396c 314 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 3.4E-50 T 11-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AL543_20175 d0843afe5f8d3aa50e9e6f768833396c 314 SUPERFAMILY SSF53271 69 306 7.32E-67 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AL543_20175 d0843afe5f8d3aa50e9e6f768833396c 314 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 11-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 AL543_20175 d0843afe5f8d3aa50e9e6f768833396c 314 SMART SM01400 4 121 1.6E-76 T 11-10-2018 AL543_20175 d0843afe5f8d3aa50e9e6f768833396c 314 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 4 314 49.577 T 11-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 AL543_20175 d0843afe5f8d3aa50e9e6f768833396c 314 Gene3D G3DSA:3.40.50.2020 7 302 6.7E-135 T 11-10-2018 AL543_20175 d0843afe5f8d3aa50e9e6f768833396c 314 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 313 1.1E-30 T 11-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AL543_20175 d0843afe5f8d3aa50e9e6f768833396c 314 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 314 4.7E-125 T 11-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AL543_20175 d0843afe5f8d3aa50e9e6f768833396c 314 Gene3D G3DSA:3.40.50.2020 148 290 6.7E-135 T 11-10-2018 AL543_09500 eaa435ef7d2d6bb84b4509e162e8ea69 293 Gene3D G3DSA:3.90.1530.30 53 116 6.3E-28 T 11-10-2018 AL543_09500 eaa435ef7d2d6bb84b4509e162e8ea69 293 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 36 214 9.9E-59 T 11-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 AL543_09500 eaa435ef7d2d6bb84b4509e162e8ea69 293 SMART SM00470 40 130 5.7E-36 T 11-10-2018 IPR003115 ParB/Sulfiredoxin AL543_09500 eaa435ef7d2d6bb84b4509e162e8ea69 293 Pfam PF02195 ParB-like nuclease domain 43 130 4.9E-29 T 11-10-2018 IPR003115 ParB/Sulfiredoxin AL543_09500 eaa435ef7d2d6bb84b4509e162e8ea69 293 Gene3D G3DSA:1.10.10.2830 117 230 7.7E-35 T 11-10-2018 AL543_09500 eaa435ef7d2d6bb84b4509e162e8ea69 293 SUPERFAMILY SSF110849 42 174 1.57E-33 T 11-10-2018 IPR036086 ParB/Sulfiredoxin superfamily AL543_13715 2370bf8a6eed1c1c93b6fc9bae61dc8e 352 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 44 258 2.3E-29 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL543_13715 2370bf8a6eed1c1c93b6fc9bae61dc8e 352 Gene3D G3DSA:2.40.420.20 269 337 1.1E-70 T 11-10-2018 AL543_13715 2370bf8a6eed1c1c93b6fc9bae61dc8e 352 Gene3D G3DSA:2.40.30.170 45 268 1.1E-70 T 11-10-2018 AL543_13715 2370bf8a6eed1c1c93b6fc9bae61dc8e 352 Gene3D G3DSA:2.40.50.100 58 186 1.1E-70 T 11-10-2018 AL543_13715 2370bf8a6eed1c1c93b6fc9bae61dc8e 352 SUPERFAMILY SSF111369 48 264 3.14E-40 T 11-10-2018 AL543_13715 2370bf8a6eed1c1c93b6fc9bae61dc8e 352 Gene3D G3DSA:1.10.287.470 93 152 1.1E-70 T 11-10-2018 AL543_13715 2370bf8a6eed1c1c93b6fc9bae61dc8e 352 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 339 4.2E-93 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL543_12010 af1abfefca99e1847bf25942b3fdc9a3 245 Pfam PF02167 Cytochrome C1 family 34 244 5.2E-15 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 AL543_12010 af1abfefca99e1847bf25942b3fdc9a3 245 SUPERFAMILY SSF46626 16 209 4.3E-48 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL543_12010 af1abfefca99e1847bf25942b3fdc9a3 245 Gene3D G3DSA:1.10.760.10 25 210 5.0E-16 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL543_06780 d9279f0525ddefe166c91290f42aecf0 398 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 173 3.2E-39 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AL543_06780 d9279f0525ddefe166c91290f42aecf0 398 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 11-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 AL543_06780 d9279f0525ddefe166c91290f42aecf0 398 SMART SM00865 207 325 8.0E-56 T 11-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 AL543_06780 d9279f0525ddefe166c91290f42aecf0 398 SMART SM00864 13 205 4.9E-112 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AL543_06780 d9279f0525ddefe166c91290f42aecf0 398 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 385 38.155 T 11-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 AL543_06780 d9279f0525ddefe166c91290f42aecf0 398 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 11-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 AL543_06780 d9279f0525ddefe166c91290f42aecf0 398 Gene3D G3DSA:3.40.50.1440 5 220 6.0E-80 T 11-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 AL543_06780 d9279f0525ddefe166c91290f42aecf0 398 Gene3D G3DSA:3.30.1330.20 221 327 1.5E-34 T 11-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 AL543_06780 d9279f0525ddefe166c91290f42aecf0 398 SUPERFAMILY SSF55307 204 320 8.93E-43 T 11-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 AL543_06780 d9279f0525ddefe166c91290f42aecf0 398 Pfam PF12327 FtsZ family, C-terminal domain 222 316 2.8E-36 T 11-10-2018 IPR024757 Cell division protein FtsZ, C-terminal AL543_06780 d9279f0525ddefe166c91290f42aecf0 398 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 328 9.2E-136 T 11-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 AL543_06780 d9279f0525ddefe166c91290f42aecf0 398 SUPERFAMILY SSF52490 13 208 3.4E-69 T 11-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 AL543_06780 d9279f0525ddefe166c91290f42aecf0 398 PRINTS PR00423 Cell division protein FtsZ signature 126 147 5.7E-52 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AL543_06780 d9279f0525ddefe166c91290f42aecf0 398 PRINTS PR00423 Cell division protein FtsZ signature 212 233 5.7E-52 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AL543_06780 d9279f0525ddefe166c91290f42aecf0 398 PRINTS PR00423 Cell division protein FtsZ signature 189 211 5.7E-52 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AL543_06780 d9279f0525ddefe166c91290f42aecf0 398 PRINTS PR00423 Cell division protein FtsZ signature 98 118 5.7E-52 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AL543_17825 b66ed710a2a9e86fa26a40b4be66d712 761 SUPERFAMILY SSF51726 396 757 3.27E-113 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 AL543_17825 b66ed710a2a9e86fa26a40b4be66d712 761 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 7 757 0.0 T 11-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AL543_17825 b66ed710a2a9e86fa26a40b4be66d712 761 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 431 753 7.9E-150 T 11-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AL543_17825 b66ed710a2a9e86fa26a40b4be66d712 761 Gene3D G3DSA:3.20.20.210 389 756 0.0 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 AL543_17825 b66ed710a2a9e86fa26a40b4be66d712 761 PIRSF PIRSF000382 1 761 0.0 T 11-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AL543_17825 b66ed710a2a9e86fa26a40b4be66d712 761 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 2 758 35.833 T 11-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AL543_17825 b66ed710a2a9e86fa26a40b4be66d712 761 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 4 314 7.9E-119 T 11-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AL543_17825 b66ed710a2a9e86fa26a40b4be66d712 761 Gene3D G3DSA:3.20.20.210 6 524 0.0 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 AL543_17825 b66ed710a2a9e86fa26a40b4be66d712 761 SUPERFAMILY SSF51726 4 393 2.62E-106 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 AL543_03215 a050bfbd91b5b67b0f297c28468e6294 552 Gene3D G3DSA:3.40.50.300 8 228 8.9E-60 T 11-10-2018 AL543_03215 a050bfbd91b5b67b0f297c28468e6294 552 Pfam PF07728 AAA domain (dynein-related subfamily) 49 179 2.9E-23 T 11-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 AL543_03215 a050bfbd91b5b67b0f297c28468e6294 552 SMART SM00382 46 189 1.9E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_03215 a050bfbd91b5b67b0f297c28468e6294 552 SUPERFAMILY SSF52540 18 294 4.69E-20 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_03215 a050bfbd91b5b67b0f297c28468e6294 552 Gene3D G3DSA:1.10.8.300 229 299 7.6E-27 T 11-10-2018 AL543_03215 a050bfbd91b5b67b0f297c28468e6294 552 Pfam PF12592 Protein of unknown function (DUF3763) 482 534 3.4E-19 T 11-10-2018 IPR022547 ATPase, RavA, C-terminal GO:0042626 AL543_04100 dffde24929c5869729b909497ef07b08 135 Pfam PF14760 Rnk N-terminus 6 43 4.8E-12 T 11-10-2018 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain AL543_04100 dffde24929c5869729b909497ef07b08 135 PIRSF PIRSF006092 18 127 2.4E-26 T 11-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AL543_04100 dffde24929c5869729b909497ef07b08 135 Gene3D G3DSA:3.10.50.30 45 135 3.9E-26 T 11-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 AL543_04100 dffde24929c5869729b909497ef07b08 135 SUPERFAMILY SSF54534 49 125 2.75E-15 T 11-10-2018 AL543_04100 dffde24929c5869729b909497ef07b08 135 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 50 124 7.5E-15 T 11-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AL543_16815 cd7995e5b1a9a349df5540b750d67669 271 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 19 249 55.153 T 11-10-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 AL543_16815 cd7995e5b1a9a349df5540b750d67669 271 SUPERFAMILY SSF52467 19 247 2.12E-72 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AL543_16815 cd7995e5b1a9a349df5540b750d67669 271 Gene3D G3DSA:3.40.50.1220 21 237 2.5E-79 T 11-10-2018 AL543_16815 cd7995e5b1a9a349df5540b750d67669 271 Pfam PF02146 Sir2 family 26 199 1.4E-50 T 11-10-2018 IPR003000 Sirtuin family GO:0070403 AL543_16815 cd7995e5b1a9a349df5540b750d67669 271 Gene3D G3DSA:3.30.1600.10 35 171 2.5E-79 T 11-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily AL543_09030 56642d36389a5c32b13947d5c7626dc5 183 Gene3D G3DSA:3.40.1410.10 12 178 7.0E-38 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AL543_09030 56642d36389a5c32b13947d5c7626dc5 183 Pfam PF04345 Chorismate lyase 16 183 1.5E-70 T 11-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 AL543_09030 56642d36389a5c32b13947d5c7626dc5 183 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 19 178 23.179 T 11-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 AL543_09030 56642d36389a5c32b13947d5c7626dc5 183 SUPERFAMILY SSF64288 12 178 7.85E-45 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AL543_16755 b61de8a14b959817394b114e70c68860 665 SUPERFAMILY SSF50156 218 338 7.71E-15 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AL543_16755 b61de8a14b959817394b114e70c68860 665 SUPERFAMILY SSF52096 166 532 2.49E-72 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AL543_16755 b61de8a14b959817394b114e70c68860 665 Gene3D G3DSA:2.30.42.10 237 321 5.1E-11 T 11-10-2018 AL543_16755 b61de8a14b959817394b114e70c68860 665 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 240 321 3.3E-13 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AL543_16755 b61de8a14b959817394b114e70c68860 665 SMART SM00245 327 528 4.8E-67 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AL543_16755 b61de8a14b959817394b114e70c68860 665 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 531 663 4.5E-40 T 11-10-2018 IPR020992 Tail specific protease, C-terminal AL543_16755 b61de8a14b959817394b114e70c68860 665 SMART SM00228 247 324 2.0E-8 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AL543_16755 b61de8a14b959817394b114e70c68860 665 Pfam PF03572 Peptidase family S41 357 526 5.4E-52 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AL543_16755 b61de8a14b959817394b114e70c68860 665 Gene3D G3DSA:3.90.226.10 325 545 6.5E-58 T 11-10-2018 AL543_16755 b61de8a14b959817394b114e70c68860 665 Pfam PF08180 B melanoma antigen family 9 37 4.0E-11 T 11-10-2018 IPR012530 B melanoma antigen-like AL543_16755 b61de8a14b959817394b114e70c68860 665 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 197 548 1.9E-112 T 11-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 AL543_07515 e8011ccdd0c97ba3cf22158bf39cc53c 487 Pfam PF04552 Sigma-54, DNA binding domain 327 485 1.5E-73 T 11-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding AL543_07515 e8011ccdd0c97ba3cf22158bf39cc53c 487 PRINTS PR00045 Sigma-54 factor signature 198 215 4.3E-30 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AL543_07515 e8011ccdd0c97ba3cf22158bf39cc53c 487 PRINTS PR00045 Sigma-54 factor signature 386 398 4.3E-30 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AL543_07515 e8011ccdd0c97ba3cf22158bf39cc53c 487 PRINTS PR00045 Sigma-54 factor signature 402 413 4.3E-30 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AL543_07515 e8011ccdd0c97ba3cf22158bf39cc53c 487 PRINTS PR00045 Sigma-54 factor signature 460 478 4.3E-30 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AL543_07515 e8011ccdd0c97ba3cf22158bf39cc53c 487 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 374 393 - T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AL543_07515 e8011ccdd0c97ba3cf22158bf39cc53c 487 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 465 472 - T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AL543_07515 e8011ccdd0c97ba3cf22158bf39cc53c 487 Pfam PF04963 Sigma-54 factor, core binding domain 126 315 2.0E-59 T 11-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 AL543_07515 e8011ccdd0c97ba3cf22158bf39cc53c 487 PIRSF PIRSF000774 1 487 4.2E-153 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AL543_07515 e8011ccdd0c97ba3cf22158bf39cc53c 487 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 484 2.1E-156 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AL543_07515 e8011ccdd0c97ba3cf22158bf39cc53c 487 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 49 3.8E-17 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AL543_07515 e8011ccdd0c97ba3cf22158bf39cc53c 487 Gene3D G3DSA:1.10.10.60 427 484 8.6E-24 T 11-10-2018 AL543_07515 e8011ccdd0c97ba3cf22158bf39cc53c 487 Gene3D G3DSA:1.10.10.1330 128 247 3.1E-23 T 11-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily AL543_07995 f1af79ae2de724eb52a4ac41b19310e0 489 SUPERFAMILY SSF52540 12 218 2.42E-7 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_07995 f1af79ae2de724eb52a4ac41b19310e0 489 Pfam PF13401 AAA domain 29 152 3.4E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_07995 f1af79ae2de724eb52a4ac41b19310e0 489 Gene3D G3DSA:3.30.70.1070 386 486 6.0E-26 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AL543_07995 f1af79ae2de724eb52a4ac41b19310e0 489 Gene3D G3DSA:3.40.50.300 9 163 2.1E-6 T 11-10-2018 AL543_07995 f1af79ae2de724eb52a4ac41b19310e0 489 Pfam PF05036 Sporulation related domain 402 475 7.8E-8 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 AL543_00570 3a8c85b8b1ff8cd1173f7c549fa916a2 90 SUPERFAMILY SSF54403 5 56 4.34E-5 T 11-10-2018 AL543_07990 76d5f3a869173a325c444584154ddee2 277 Gene3D G3DSA:1.10.1020.10 57 156 1.4E-82 T 11-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 AL543_07990 76d5f3a869173a325c444584154ddee2 277 PIRSF PIRSF000398 1 274 9.8E-74 T 11-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 AL543_07990 76d5f3a869173a325c444584154ddee2 277 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 1.1E-17 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AL543_07990 76d5f3a869173a325c444584154ddee2 277 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 1.1E-17 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AL543_07990 76d5f3a869173a325c444584154ddee2 277 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 1.1E-17 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AL543_07990 76d5f3a869173a325c444584154ddee2 277 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 1.1E-17 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AL543_07990 76d5f3a869173a325c444584154ddee2 277 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 252 1.1E-68 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AL543_07990 76d5f3a869173a325c444584154ddee2 277 Gene3D G3DSA:3.40.50.150 7 239 1.4E-82 T 11-10-2018 AL543_07990 76d5f3a869173a325c444584154ddee2 277 SUPERFAMILY SSF53335 5 268 5.24E-74 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL543_07990 76d5f3a869173a325c444584154ddee2 277 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 268 4.8E-95 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AL543_07990 76d5f3a869173a325c444584154ddee2 277 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AL543_11275 cd53310f6bf54883e2aef50ee275263b 140 SUPERFAMILY SSF89946 7 126 6.93E-40 T 11-10-2018 IPR036701 RraB-like superfamily AL543_11275 cd53310f6bf54883e2aef50ee275263b 140 Pfam PF06877 Regulator of ribonuclease activity B 18 120 7.6E-34 T 11-10-2018 IPR009671 Regulator of ribonuclease activity B domain AL543_11275 cd53310f6bf54883e2aef50ee275263b 140 PIRSF PIRSF018193 8 140 8.7E-61 T 11-10-2018 IPR016716 Regulator of ribonuclease activity B AL543_11275 cd53310f6bf54883e2aef50ee275263b 140 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 11 124 30.086 T 11-10-2018 IPR016716 Regulator of ribonuclease activity B AL543_11275 cd53310f6bf54883e2aef50ee275263b 140 Gene3D G3DSA:3.30.70.970 1 132 2.0E-60 T 11-10-2018 IPR036701 RraB-like superfamily AL543_17220 ac27fa808158e64fa788a9acece48468 347 Pfam PF01263 Aldose 1-epimerase 14 340 2.1E-92 T 11-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 AL543_17220 ac27fa808158e64fa788a9acece48468 347 TIGRFAM TIGR02636 galM_Leloir: galactose mutarotase 9 341 1.1E-138 T 11-10-2018 IPR013458 Aldose 1-epimerase, bacterial GO:0004034|GO:0006012 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 AL543_17220 ac27fa808158e64fa788a9acece48468 347 PIRSF PIRSF005096 2 344 6.0E-115 T 11-10-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 AL543_17220 ac27fa808158e64fa788a9acece48468 347 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 167 176 - T 11-10-2018 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 AL543_17220 ac27fa808158e64fa788a9acece48468 347 Gene3D G3DSA:2.70.98.10 6 346 1.8E-113 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AL543_17220 ac27fa808158e64fa788a9acece48468 347 SUPERFAMILY SSF74650 5 341 1.44E-107 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 AL543_04510 2cd32f476e23851bd1b914c473ca5cf8 580 SUPERFAMILY SSF55816 369 566 3.01E-41 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL543_04510 2cd32f476e23851bd1b914c473ca5cf8 580 PRINTS PR01607 Apyrase family signature 234 257 1.9E-16 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL543_04510 2cd32f476e23851bd1b914c473ca5cf8 580 PRINTS PR01607 Apyrase family signature 10 28 1.9E-16 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL543_04510 2cd32f476e23851bd1b914c473ca5cf8 580 PRINTS PR01607 Apyrase family signature 513 532 1.9E-16 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL543_04510 2cd32f476e23851bd1b914c473ca5cf8 580 PRINTS PR01607 Apyrase family signature 274 294 1.9E-16 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL543_04510 2cd32f476e23851bd1b914c473ca5cf8 580 PRINTS PR01607 Apyrase family signature 215 232 1.9E-16 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL543_04510 2cd32f476e23851bd1b914c473ca5cf8 580 Gene3D G3DSA:3.60.21.10 3 368 7.5E-88 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like AL543_04510 2cd32f476e23851bd1b914c473ca5cf8 580 Gene3D G3DSA:3.90.780.10 369 574 3.0E-34 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL543_04510 2cd32f476e23851bd1b914c473ca5cf8 580 SUPERFAMILY SSF56300 6 357 3.08E-73 T 11-10-2018 AL543_04510 2cd32f476e23851bd1b914c473ca5cf8 580 Pfam PF02872 5'-nucleotidase, C-terminal domain 371 538 5.3E-24 T 11-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL543_04510 2cd32f476e23851bd1b914c473ca5cf8 580 Pfam PF00149 Calcineurin-like phosphoesterase 13 251 8.4E-7 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AL543_17640 bb54db016aacd0e13e988fbd6d450e04 233 Gene3D G3DSA:3.30.2350.10 1 192 2.2E-47 T 11-10-2018 AL543_17640 bb54db016aacd0e13e988fbd6d450e04 233 Pfam PF00849 RNA pseudouridylate synthase 10 153 3.1E-25 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL543_17640 bb54db016aacd0e13e988fbd6d450e04 233 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 47 61 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL543_17640 bb54db016aacd0e13e988fbd6d450e04 233 SUPERFAMILY SSF55120 2 191 2.08E-45 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL543_17640 bb54db016aacd0e13e988fbd6d450e04 233 TIGRFAM TIGR01621 RluA-like: pseudouridine synthase Rlu family protein, TIGR01621 1 220 6.4E-115 T 11-10-2018 IPR006508 Pseudouridine synthase, RluA-like AL543_02260 7cc05ffb6961eead54d8d20ba63b8ef6 351 Gene3D G3DSA:3.40.190.10 49 341 1.2E-87 T 11-10-2018 AL543_02260 7cc05ffb6961eead54d8d20ba63b8ef6 351 Gene3D G3DSA:3.40.190.10 135 278 1.2E-87 T 11-10-2018 AL543_02260 7cc05ffb6961eead54d8d20ba63b8ef6 351 Pfam PF16868 NMT1-like family 49 341 9.7E-107 T 11-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family AL543_02260 7cc05ffb6961eead54d8d20ba63b8ef6 351 SUPERFAMILY SSF53850 47 342 4.49E-66 T 11-10-2018 AL543_02260 7cc05ffb6961eead54d8d20ba63b8ef6 351 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 17 341 3.7E-100 T 11-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family AL543_21120 fee817dee31b78dc8bdbad1c758a7741 41 Pfam PF04875 Protein of unknown function, DUF645 2 40 1.4E-20 T 11-10-2018 IPR006959 Protein of unknown function DUF645 AL543_05495 8146b3f13c6d78a1ae4c15e337eac11d 84 Gene3D G3DSA:3.40.1620.10 1 40 2.7E-8 T 11-10-2018 AL543_05495 8146b3f13c6d78a1ae4c15e337eac11d 84 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 4 55 1.9E-7 T 11-10-2018 AL543_05495 8146b3f13c6d78a1ae4c15e337eac11d 84 SUPERFAMILY SSF143120 1 81 1.27E-23 T 11-10-2018 IPR036165 YefM-like superfamily AL543_05495 8146b3f13c6d78a1ae4c15e337eac11d 84 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 74 3.9E-21 T 11-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AL543_05495 8146b3f13c6d78a1ae4c15e337eac11d 84 Gene3D G3DSA:1.10.1220.170 41 84 2.5E-13 T 11-10-2018 AL543_19835 7afce5d6d10ce77de7af61939b9800a0 337 SMART SM00859 6 121 1.0E-42 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AL543_19835 7afce5d6d10ce77de7af61939b9800a0 337 PIRSF PIRSF000148 4 337 3.6E-134 T 11-10-2018 AL543_19835 7afce5d6d10ce77de7af61939b9800a0 337 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 232 246 - T 11-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AL543_19835 7afce5d6d10ce77de7af61939b9800a0 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 120 1.4E-32 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AL543_19835 7afce5d6d10ce77de7af61939b9800a0 337 SUPERFAMILY SSF51735 5 159 1.08E-51 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_19835 7afce5d6d10ce77de7af61939b9800a0 337 Gene3D G3DSA:3.30.360.10 130 316 9.5E-154 T 11-10-2018 AL543_19835 7afce5d6d10ce77de7af61939b9800a0 337 SUPERFAMILY SSF55347 131 320 1.7E-78 T 11-10-2018 AL543_19835 7afce5d6d10ce77de7af61939b9800a0 337 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 319 5.5E-63 T 11-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL543_19835 7afce5d6d10ce77de7af61939b9800a0 337 Gene3D G3DSA:3.40.50.720 7 331 9.5E-154 T 11-10-2018 AL543_19835 7afce5d6d10ce77de7af61939b9800a0 337 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 6 334 5.5E-130 T 11-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AL543_19835 7afce5d6d10ce77de7af61939b9800a0 337 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 4 333 36.373 T 11-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AL543_10240 11eb65ebe160dbf9ef46cfd8ce19f1a1 307 Pfam PF07507 WavE lipopolysaccharide synthesis 9 305 7.0E-109 T 11-10-2018 IPR011122 WavE lipopolysaccharide synthesis AL543_19595 3456e0d0f84b4d6daafb2239876893eb 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 204 228 3.3E-64 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL543_19595 3456e0d0f84b4d6daafb2239876893eb 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 3.3E-64 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL543_19595 3456e0d0f84b4d6daafb2239876893eb 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 3.3E-64 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL543_19595 3456e0d0f84b4d6daafb2239876893eb 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 3.3E-64 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL543_19595 3456e0d0f84b4d6daafb2239876893eb 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 3.3E-64 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL543_19595 3456e0d0f84b4d6daafb2239876893eb 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 3.3E-64 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL543_19595 3456e0d0f84b4d6daafb2239876893eb 250 Pfam PF01578 Cytochrome C assembly protein 33 184 1.0E-29 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AL543_19595 3456e0d0f84b4d6daafb2239876893eb 250 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 228 1.4E-84 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL543_01690 2cb01342cf0d1cdea064f88cb1ee040e 212 Pfam PF00462 Glutaredoxin 116 181 3.2E-15 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AL543_01690 2cb01342cf0d1cdea064f88cb1ee040e 212 ProSitePatterns PS00195 Glutaredoxin active site. 117 133 - T 11-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 AL543_01690 2cb01342cf0d1cdea064f88cb1ee040e 212 PRINTS PR00160 Glutaredoxin signature 164 177 2.0E-7 T 11-10-2018 IPR014025 Glutaredoxin subgroup AL543_01690 2cb01342cf0d1cdea064f88cb1ee040e 212 PRINTS PR00160 Glutaredoxin signature 115 133 2.0E-7 T 11-10-2018 IPR014025 Glutaredoxin subgroup AL543_01690 2cb01342cf0d1cdea064f88cb1ee040e 212 PRINTS PR00160 Glutaredoxin signature 178 191 2.0E-7 T 11-10-2018 IPR014025 Glutaredoxin subgroup AL543_01690 2cb01342cf0d1cdea064f88cb1ee040e 212 SUPERFAMILY SSF52833 116 194 6.34E-17 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL543_01690 2cb01342cf0d1cdea064f88cb1ee040e 212 Gene3D G3DSA:3.40.30.10 116 192 3.0E-18 T 11-10-2018 AL543_18985 60f286bfe71671abeb437be10508d078 339 SMART SM00382 28 211 5.2E-19 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_18985 60f286bfe71671abeb437be10508d078 339 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_18985 60f286bfe71671abeb437be10508d078 339 Pfam PF08402 TOBE domain 257 330 1.1E-5 T 11-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 AL543_18985 60f286bfe71671abeb437be10508d078 339 Pfam PF00005 ABC transporter 20 161 4.4E-38 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_18985 60f286bfe71671abeb437be10508d078 339 SUPERFAMILY SSF50331 234 334 5.67E-7 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AL543_18985 60f286bfe71671abeb437be10508d078 339 Gene3D G3DSA:3.40.50.300 1 238 2.1E-82 T 11-10-2018 AL543_18985 60f286bfe71671abeb437be10508d078 339 SUPERFAMILY SSF52540 4 240 6.82E-87 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_08950 dcace103209d5374927642d99cddd95b 462 Gene3D G3DSA:1.10.10.920 369 462 4.4E-34 T 11-10-2018 AL543_08950 dcace103209d5374927642d99cddd95b 462 Gene3D G3DSA:3.80.30.20 7 368 8.8E-139 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AL543_08950 dcace103209d5374927642d99cddd95b 462 SUPERFAMILY SSF102114 11 449 1.44E-145 T 11-10-2018 AL543_08950 dcace103209d5374927642d99cddd95b 462 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 13 462 1.9E-209 T 11-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 AL543_08950 dcace103209d5374927642d99cddd95b 462 PIRSF PIRSF000167 8 459 8.3E-173 T 11-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 AL543_08950 dcace103209d5374927642d99cddd95b 462 SMART SM00729 57 277 1.6E-55 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AL543_08950 dcace103209d5374927642d99cddd95b 462 Pfam PF04055 Radical SAM superfamily 62 232 3.5E-19 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL543_08950 dcace103209d5374927642d99cddd95b 462 Pfam PF06969 HemN C-terminal domain 368 436 1.2E-9 T 11-10-2018 IPR010723 HemN, C-terminal AL543_17075 0473f4e4b45955db547289716af32f2e 309 Gene3D G3DSA:1.10.10.10 5 92 9.6E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_17075 0473f4e4b45955db547289716af32f2e 309 Gene3D G3DSA:3.40.190.10 94 298 1.8E-54 T 11-10-2018 AL543_17075 0473f4e4b45955db547289716af32f2e 309 SUPERFAMILY SSF46785 8 88 2.86E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_17075 0473f4e4b45955db547289716af32f2e 309 SUPERFAMILY SSF53850 94 300 8.32E-40 T 11-10-2018 AL543_17075 0473f4e4b45955db547289716af32f2e 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 72 1.2E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_17075 0473f4e4b45955db547289716af32f2e 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 1.0E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_17075 0473f4e4b45955db547289716af32f2e 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 1.0E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_17075 0473f4e4b45955db547289716af32f2e 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 1.0E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_17075 0473f4e4b45955db547289716af32f2e 309 Pfam PF03466 LysR substrate binding domain 100 300 5.0E-19 T 11-10-2018 IPR005119 LysR, substrate-binding AL543_17075 0473f4e4b45955db547289716af32f2e 309 Gene3D G3DSA:3.40.190.10 175 273 1.8E-54 T 11-10-2018 AL543_04575 952353f16cf39ff3ff79c0e8aff71e20 359 Gene3D G3DSA:2.120.10.80 2 154 7.2E-13 T 11-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 AL543_04575 952353f16cf39ff3ff79c0e8aff71e20 359 Gene3D G3DSA:2.120.10.80 175 357 6.9E-6 T 11-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 AL543_04575 952353f16cf39ff3ff79c0e8aff71e20 359 SUPERFAMILY SSF117281 6 144 6.15E-17 T 11-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 AL543_04575 952353f16cf39ff3ff79c0e8aff71e20 359 SUPERFAMILY SSF117281 174 343 2.09E-11 T 11-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 AL543_04575 952353f16cf39ff3ff79c0e8aff71e20 359 TIGRFAM TIGR03547 muta_rot_YjhT: mutatrotase, YjhT family 8 353 6.5E-130 T 11-10-2018 IPR019936 Mutatrotase, YjhT-like AL543_04575 952353f16cf39ff3ff79c0e8aff71e20 359 Pfam PF07646 Kelch motif 61 107 2.0E-5 T 11-10-2018 IPR011498 Kelch repeat type 2 GO:0005515 AL543_20410 ca61aa283af68d244f558b6ecaa03d58 915 ProSitePatterns PS01047 Heavy-metal-associated domain. 178 207 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AL543_20410 ca61aa283af68d244f558b6ecaa03d58 915 Pfam PF00403 Heavy-metal-associated domain 177 233 3.8E-13 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AL543_20410 ca61aa283af68d244f558b6ecaa03d58 915 SUPERFAMILY SSF81665 360 590 6.8E-11 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 AL543_20410 ca61aa283af68d244f558b6ecaa03d58 915 SUPERFAMILY SSF55008 169 241 1.31E-19 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 AL543_20410 ca61aa283af68d244f558b6ecaa03d58 915 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 308 904 6.0E-186 T 11-10-2018 AL543_20410 ca61aa283af68d244f558b6ecaa03d58 915 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 327 903 4.3E-186 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AL543_20410 ca61aa283af68d244f558b6ecaa03d58 915 Pfam PF00122 E1-E2 ATPase 395 575 5.1E-49 T 11-10-2018 AL543_20410 ca61aa283af68d244f558b6ecaa03d58 915 Gene3D G3DSA:3.30.70.100 159 245 2.6E-21 T 11-10-2018 AL543_20410 ca61aa283af68d244f558b6ecaa03d58 915 Gene3D G3DSA:3.40.1110.10 607 726 3.0E-97 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AL543_20410 ca61aa283af68d244f558b6ecaa03d58 915 ProSitePatterns PS01229 Hypothetical cof family signature 2. 794 816 - T 11-10-2018 AL543_20410 ca61aa283af68d244f558b6ecaa03d58 915 Pfam PF00702 haloacid dehalogenase-like hydrolase 592 808 5.9E-45 T 11-10-2018 AL543_20410 ca61aa283af68d244f558b6ecaa03d58 915 PRINTS PR00943 Copper-transporting ATPase signature 215 235 1.5E-12 T 11-10-2018 AL543_20410 ca61aa283af68d244f558b6ecaa03d58 915 PRINTS PR00943 Copper-transporting ATPase signature 312 331 1.5E-12 T 11-10-2018 AL543_20410 ca61aa283af68d244f558b6ecaa03d58 915 PRINTS PR00943 Copper-transporting ATPase signature 364 383 1.5E-12 T 11-10-2018 AL543_20410 ca61aa283af68d244f558b6ecaa03d58 915 PRINTS PR00943 Copper-transporting ATPase signature 771 788 1.5E-12 T 11-10-2018 AL543_20410 ca61aa283af68d244f558b6ecaa03d58 915 PRINTS PR00943 Copper-transporting ATPase signature 579 594 1.5E-12 T 11-10-2018 AL543_20410 ca61aa283af68d244f558b6ecaa03d58 915 PRINTS PR00943 Copper-transporting ATPase signature 828 842 1.5E-12 T 11-10-2018 AL543_20410 ca61aa283af68d244f558b6ecaa03d58 915 PRINTS PR00943 Copper-transporting ATPase signature 867 881 1.5E-12 T 11-10-2018 AL543_20410 ca61aa283af68d244f558b6ecaa03d58 915 PRINTS PR00943 Copper-transporting ATPase signature 517 531 1.5E-12 T 11-10-2018 AL543_20410 ca61aa283af68d244f558b6ecaa03d58 915 SUPERFAMILY SSF81653 397 494 1.15E-23 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 AL543_20410 ca61aa283af68d244f558b6ecaa03d58 915 SUPERFAMILY SSF55008 74 139 4.06E-7 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 AL543_20410 ca61aa283af68d244f558b6ecaa03d58 915 Gene3D G3DSA:3.40.50.1000 577 846 3.0E-97 T 11-10-2018 IPR023214 HAD superfamily AL543_20410 ca61aa283af68d244f558b6ecaa03d58 915 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 817 829 7.3E-28 T 11-10-2018 AL543_20410 ca61aa283af68d244f558b6ecaa03d58 915 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 596 610 7.3E-28 T 11-10-2018 AL543_20410 ca61aa283af68d244f558b6ecaa03d58 915 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 719 730 7.3E-28 T 11-10-2018 AL543_20410 ca61aa283af68d244f558b6ecaa03d58 915 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 741 751 7.3E-28 T 11-10-2018 AL543_20410 ca61aa283af68d244f558b6ecaa03d58 915 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 444 458 7.3E-28 T 11-10-2018 AL543_20410 ca61aa283af68d244f558b6ecaa03d58 915 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 794 813 7.3E-28 T 11-10-2018 AL543_20410 ca61aa283af68d244f558b6ecaa03d58 915 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 598 604 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AL543_20410 ca61aa283af68d244f558b6ecaa03d58 915 Gene3D G3DSA:2.70.150.20 382 498 7.2E-37 T 11-10-2018 AL543_20410 ca61aa283af68d244f558b6ecaa03d58 915 SUPERFAMILY SSF56784 594 900 1.34E-59 T 11-10-2018 IPR036412 HAD-like superfamily AL543_20410 ca61aa283af68d244f558b6ecaa03d58 915 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 366 872 5.5E-94 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AL543_20410 ca61aa283af68d244f558b6ecaa03d58 915 Gene3D G3DSA:3.30.70.100 74 138 1.3E-5 T 11-10-2018 AL543_01545 228eb9990139bef10c44d666f6868758 236 Gene3D G3DSA:3.40.50.1580 1 236 2.0E-77 T 11-10-2018 AL543_01545 228eb9990139bef10c44d666f6868758 236 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 11-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL543_01545 228eb9990139bef10c44d666f6868758 236 SUPERFAMILY SSF53167 3 234 1.14E-92 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 AL543_01545 228eb9990139bef10c44d666f6868758 236 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 52.139 T 11-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 AL543_01545 228eb9990139bef10c44d666f6868758 236 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 233 2.0E-112 T 11-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 AL543_01545 228eb9990139bef10c44d666f6868758 236 Pfam PF01048 Phosphorylase superfamily 17 219 2.5E-36 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AL543_06435 9bceccaf1387549ffdb69dd297aef268 102 Pfam PF07130 YebG protein 1 72 1.7E-31 T 11-10-2018 IPR009813 Uncharacterised protein family YebG AL543_06435 9bceccaf1387549ffdb69dd297aef268 102 Gene3D G3DSA:1.10.10.710 21 97 4.5E-8 T 11-10-2018 IPR038627 YebG-like superfamily AL543_00280 1bd14c41e883526a7653d26a798935df 237 SUPERFAMILY SSF47413 1 69 4.56E-16 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL543_00280 1bd14c41e883526a7653d26a798935df 237 SUPERFAMILY SSF51306 98 233 1.83E-21 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily AL543_00280 1bd14c41e883526a7653d26a798935df 237 Pfam PF00717 Peptidase S24-like 148 215 1.5E-11 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AL543_00280 1bd14c41e883526a7653d26a798935df 237 SMART SM00530 9 64 1.8E-14 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL543_00280 1bd14c41e883526a7653d26a798935df 237 Pfam PF01381 Helix-turn-helix 10 64 7.7E-14 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL543_00280 1bd14c41e883526a7653d26a798935df 237 Gene3D G3DSA:1.10.260.40 1 68 6.2E-22 T 11-10-2018 AL543_00280 1bd14c41e883526a7653d26a798935df 237 Gene3D G3DSA:2.10.109.10 109 234 6.8E-8 T 11-10-2018 AL543_19120 a370a8f3e22f47a9aca0992133d8f99c 387 TIGRFAM TIGR00843 benE: benzoate transporter 10 377 3.3E-99 T 11-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 AL543_19120 a370a8f3e22f47a9aca0992133d8f99c 387 Pfam PF03594 Benzoate membrane transport protein 7 380 3.9E-146 T 11-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 AL543_13485 3b5b08c23ffe926ef048a3a04e1c3dc1 1297 Gene3D G3DSA:3.90.650.10 420 606 9.2E-59 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AL543_13485 3b5b08c23ffe926ef048a3a04e1c3dc1 1297 SUPERFAMILY SSF82697 1 151 3.09E-52 T 11-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL543_13485 3b5b08c23ffe926ef048a3a04e1c3dc1 1297 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1297 21.374 T 11-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL543_13485 3b5b08c23ffe926ef048a3a04e1c3dc1 1297 Gene3D G3DSA:1.10.8.750 153 213 1.9E-27 T 11-10-2018 AL543_13485 3b5b08c23ffe926ef048a3a04e1c3dc1 1297 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1295 0.0 T 11-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL543_13485 3b5b08c23ffe926ef048a3a04e1c3dc1 1297 Gene3D G3DSA:3.40.50.880 983 1297 3.3E-137 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL543_13485 3b5b08c23ffe926ef048a3a04e1c3dc1 1297 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1041 1295 1.5E-107 T 11-10-2018 AL543_13485 3b5b08c23ffe926ef048a3a04e1c3dc1 1297 Gene3D G3DSA:3.30.1330.10 613 808 3.8E-26 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AL543_13485 3b5b08c23ffe926ef048a3a04e1c3dc1 1297 SUPERFAMILY SSF56042 432 615 1.94E-53 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AL543_13485 3b5b08c23ffe926ef048a3a04e1c3dc1 1297 SUPERFAMILY SSF56042 825 1035 1.64E-53 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AL543_13485 3b5b08c23ffe926ef048a3a04e1c3dc1 1297 SUPERFAMILY SSF55326 619 816 1.33E-69 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AL543_13485 3b5b08c23ffe926ef048a3a04e1c3dc1 1297 Pfam PF02769 AIR synthase related protein, C-terminal domain 432 589 5.5E-28 T 11-10-2018 IPR010918 PurM-like, C-terminal domain AL543_13485 3b5b08c23ffe926ef048a3a04e1c3dc1 1297 Pfam PF02769 AIR synthase related protein, C-terminal domain 834 965 5.7E-14 T 11-10-2018 IPR010918 PurM-like, C-terminal domain AL543_13485 3b5b08c23ffe926ef048a3a04e1c3dc1 1297 SUPERFAMILY SSF52317 1037 1296 3.82E-98 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL543_13485 3b5b08c23ffe926ef048a3a04e1c3dc1 1297 SUPERFAMILY SSF55326 221 428 1.01E-63 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AL543_13485 3b5b08c23ffe926ef048a3a04e1c3dc1 1297 Gene3D G3DSA:3.90.650.10 809 982 1.0E-30 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AL543_13485 3b5b08c23ffe926ef048a3a04e1c3dc1 1297 SUPERFAMILY SSF109736 155 220 1.7E-21 T 11-10-2018 AL543_13485 3b5b08c23ffe926ef048a3a04e1c3dc1 1297 SMART SM01211 1041 1296 2.7E-157 T 11-10-2018 AL543_13485 3b5b08c23ffe926ef048a3a04e1c3dc1 1297 Gene3D G3DSA:3.30.1330.10 214 419 2.5E-41 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AL543_03780 1eca60c84db7cb4cbc6b7e491f602205 164 TIGRFAM TIGR00402 napF: ferredoxin-type protein NapF 6 156 1.3E-43 T 11-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 AL543_03780 1eca60c84db7cb4cbc6b7e491f602205 164 Pfam PF12838 4Fe-4S dicluster domain 107 154 3.0E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL543_03780 1eca60c84db7cb4cbc6b7e491f602205 164 Pfam PF12838 4Fe-4S dicluster domain 36 80 3.2E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL543_03780 1eca60c84db7cb4cbc6b7e491f602205 164 Hamap MF_02201 Ferredoxin-type protein NapF [napF]. 24 161 23.163 T 11-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 AL543_03780 1eca60c84db7cb4cbc6b7e491f602205 164 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 140 151 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL543_03780 1eca60c84db7cb4cbc6b7e491f602205 164 SUPERFAMILY SSF54862 33 158 2.23E-19 T 11-10-2018 AL543_03780 1eca60c84db7cb4cbc6b7e491f602205 164 Gene3D G3DSA:3.30.70.20 97 159 1.2E-10 T 11-10-2018 AL543_03780 1eca60c84db7cb4cbc6b7e491f602205 164 Gene3D G3DSA:3.30.70.20 31 83 8.6E-10 T 11-10-2018 AL543_15375 b6188e7ae1081208e6658bfd7dbb999e 610 Gene3D G3DSA:3.30.420.340 380 552 3.6E-46 T 11-10-2018 IPR038476 UvrC homology region 2 superfamily AL543_15375 b6188e7ae1081208e6658bfd7dbb999e 610 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 607 28.312 T 11-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 AL543_15375 b6188e7ae1081208e6658bfd7dbb999e 610 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 387 542 9.1E-45 T 11-10-2018 IPR001162 UvrC family homology region AL543_15375 b6188e7ae1081208e6658bfd7dbb999e 610 Pfam PF01541 GIY-YIG catalytic domain 18 93 2.4E-12 T 11-10-2018 IPR000305 GIY-YIG endonuclease AL543_15375 b6188e7ae1081208e6658bfd7dbb999e 610 SMART SM00278 556 575 0.25 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AL543_15375 b6188e7ae1081208e6658bfd7dbb999e 610 SMART SM00278 588 607 13.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AL543_15375 b6188e7ae1081208e6658bfd7dbb999e 610 SUPERFAMILY SSF82771 16 100 8.63E-24 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 AL543_15375 b6188e7ae1081208e6658bfd7dbb999e 610 Pfam PF02151 UvrB/uvrC motif 207 238 3.4E-8 T 11-10-2018 IPR001943 UVR domain GO:0005515 AL543_15375 b6188e7ae1081208e6658bfd7dbb999e 610 Gene3D G3DSA:1.10.150.20 555 610 1.9E-25 T 11-10-2018 AL543_15375 b6188e7ae1081208e6658bfd7dbb999e 610 Pfam PF14520 Helix-hairpin-helix domain 558 609 4.7E-10 T 11-10-2018 AL543_15375 b6188e7ae1081208e6658bfd7dbb999e 610 SMART SM00465 17 98 1.1E-22 T 11-10-2018 IPR000305 GIY-YIG endonuclease AL543_15375 b6188e7ae1081208e6658bfd7dbb999e 610 Gene3D G3DSA:3.40.1440.10 7 102 1.4E-31 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 AL543_15375 b6188e7ae1081208e6658bfd7dbb999e 610 SUPERFAMILY SSF47781 521 609 6.99E-20 T 11-10-2018 IPR010994 RuvA domain 2-like AL543_15375 b6188e7ae1081208e6658bfd7dbb999e 610 SUPERFAMILY SSF46600 190 243 6.54E-12 T 11-10-2018 IPR036876 UVR domain superfamily AL543_15375 b6188e7ae1081208e6658bfd7dbb999e 610 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 11 589 1.6E-211 T 11-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 AL543_00315 77072fda1fc0d42c430d2fb37de7a410 397 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 11-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 AL543_00315 77072fda1fc0d42c430d2fb37de7a410 397 Pfam PF00155 Aminotransferase class I and II 43 386 5.0E-73 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL543_00315 77072fda1fc0d42c430d2fb37de7a410 397 SUPERFAMILY SSF53383 4 395 5.85E-122 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL543_00315 77072fda1fc0d42c430d2fb37de7a410 397 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 2 395 53.653 T 11-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 AL543_00315 77072fda1fc0d42c430d2fb37de7a410 397 Gene3D G3DSA:3.90.1150.10 40 387 9.7E-135 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL543_00315 77072fda1fc0d42c430d2fb37de7a410 397 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 5 397 1.6E-210 T 11-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 AL543_00315 77072fda1fc0d42c430d2fb37de7a410 397 Gene3D G3DSA:3.40.640.10 58 296 9.7E-135 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL543_20105 f0567d2df46de55d72f373cc69afcefe 188 SUPERFAMILY SSF52218 1 185 2.04E-58 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL543_20105 f0567d2df46de55d72f373cc69afcefe 188 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 11-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 AL543_20105 f0567d2df46de55d72f373cc69afcefe 188 Pfam PF03358 NADPH-dependent FMN reductase 47 131 5.4E-11 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AL543_20105 f0567d2df46de55d72f373cc69afcefe 188 Gene3D G3DSA:3.40.50.360 1 187 3.2E-63 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL543_10620 cb02ab19e9b24c0c4111a51ca7b99387 446 Gene3D G3DSA:3.30.870.10 12 442 6.3E-166 T 11-10-2018 AL543_10620 cb02ab19e9b24c0c4111a51ca7b99387 446 PIRSF PIRSF000850 1 446 3.6E-235 T 11-10-2018 AL543_10620 cb02ab19e9b24c0c4111a51ca7b99387 446 SUPERFAMILY SSF56024 248 413 7.85E-27 T 11-10-2018 AL543_10620 cb02ab19e9b24c0c4111a51ca7b99387 446 SUPERFAMILY SSF56024 7 185 1.19E-25 T 11-10-2018 AL543_10620 cb02ab19e9b24c0c4111a51ca7b99387 446 SMART SM00155 347 374 0.058 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AL543_10620 cb02ab19e9b24c0c4111a51ca7b99387 446 SMART SM00155 126 152 0.0015 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AL543_10620 cb02ab19e9b24c0c4111a51ca7b99387 446 Pfam PF13091 PLD-like domain 251 402 4.4E-25 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AL543_10620 cb02ab19e9b24c0c4111a51ca7b99387 446 Pfam PF13091 PLD-like domain 34 146 8.2E-7 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AL543_10620 cb02ab19e9b24c0c4111a51ca7b99387 446 Gene3D G3DSA:3.30.870.10 18 225 6.3E-166 T 11-10-2018 AL543_01435 72135bace826affbf68dfb33c97d3dcd 244 SUPERFAMILY SSF46785 10 76 3.03E-9 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_01435 72135bace826affbf68dfb33c97d3dcd 244 Gene3D G3DSA:1.10.10.10 9 79 4.5E-8 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_01435 72135bace826affbf68dfb33c97d3dcd 244 Pfam PF01614 Bacterial transcriptional regulator 130 238 4.6E-13 T 11-10-2018 IPR014757 Transcription regulator IclR, C-terminal AL543_01435 72135bace826affbf68dfb33c97d3dcd 244 Gene3D G3DSA:3.30.450.40 80 240 2.7E-63 T 11-10-2018 IPR029016 GAF-like domain superfamily AL543_01435 72135bace826affbf68dfb33c97d3dcd 244 SUPERFAMILY SSF55781 82 240 1.47E-31 T 11-10-2018 AL543_01435 72135bace826affbf68dfb33c97d3dcd 244 Pfam PF09339 IclR helix-turn-helix domain 13 61 7.2E-5 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL543_10510 1d5754b80b2b1a24d94542f47d07ead8 607 SUPERFAMILY SSF51206 8 128 2.62E-15 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like AL543_10510 1d5754b80b2b1a24d94542f47d07ead8 607 SMART SM00116 155 212 1.8 T 11-10-2018 IPR000644 CBS domain AL543_10510 1d5754b80b2b1a24d94542f47d07ead8 607 SMART SM00116 229 276 2.5 T 11-10-2018 IPR000644 CBS domain AL543_10510 1d5754b80b2b1a24d94542f47d07ead8 607 SUPERFAMILY SSF54631 144 275 3.42E-18 T 11-10-2018 AL543_10510 1d5754b80b2b1a24d94542f47d07ead8 607 Gene3D G3DSA:3.10.580.10 136 288 2.1E-20 T 11-10-2018 AL543_10510 1d5754b80b2b1a24d94542f47d07ead8 607 Gene3D G3DSA:2.60.120.10 5 135 5.0E-12 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL543_10510 1d5754b80b2b1a24d94542f47d07ead8 607 Pfam PF00571 CBS domain 222 275 0.0033 T 11-10-2018 IPR000644 CBS domain AL543_10510 1d5754b80b2b1a24d94542f47d07ead8 607 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 470 603 7.7E-41 T 11-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding AL543_10510 1d5754b80b2b1a24d94542f47d07ead8 607 Pfam PF00027 Cyclic nucleotide-binding domain 31 113 1.2E-11 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AL543_10510 1d5754b80b2b1a24d94542f47d07ead8 607 Pfam PF03445 Putative nucleotidyltransferase DUF294 301 430 4.3E-41 T 11-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 AL543_06295 0c6fb4f9b53418900f8cf30e35b3ce1e 210 PIRSF PIRSF006102 3 210 1.1E-72 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 AL543_06295 0c6fb4f9b53418900f8cf30e35b3ce1e 210 Pfam PF02508 Rnf-Nqr subunit, membrane protein 9 195 1.0E-62 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 AL543_06295 0c6fb4f9b53418900f8cf30e35b3ce1e 210 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 2 207 37.001 T 11-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 AL543_06295 0c6fb4f9b53418900f8cf30e35b3ce1e 210 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 3 207 1.6E-108 T 11-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 AL543_20400 4001e77fd1f5e62ce756953cab226918 327 SUPERFAMILY SSF103088 189 313 2.88E-39 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL543_20400 4001e77fd1f5e62ce756953cab226918 327 ProSitePatterns PS01068 OmpA-like domain. 245 289 - T 11-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 AL543_20400 4001e77fd1f5e62ce756953cab226918 327 Pfam PF00691 OmpA family 212 307 9.2E-27 T 11-10-2018 IPR006665 OmpA-like domain AL543_20400 4001e77fd1f5e62ce756953cab226918 327 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 258 275 3.0E-6 T 11-10-2018 AL543_20400 4001e77fd1f5e62ce756953cab226918 327 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 276 295 3.0E-6 T 11-10-2018 AL543_20400 4001e77fd1f5e62ce756953cab226918 327 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 296 316 3.0E-6 T 11-10-2018 AL543_20400 4001e77fd1f5e62ce756953cab226918 327 Gene3D G3DSA:2.40.160.20 6 188 1.7E-42 T 11-10-2018 AL543_20400 4001e77fd1f5e62ce756953cab226918 327 PRINTS PR01021 OMPA domain signature 243 258 1.0E-14 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL543_20400 4001e77fd1f5e62ce756953cab226918 327 PRINTS PR01021 OMPA domain signature 213 235 1.0E-14 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL543_20400 4001e77fd1f5e62ce756953cab226918 327 PRINTS PR01021 OMPA domain signature 258 274 1.0E-14 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL543_20400 4001e77fd1f5e62ce756953cab226918 327 Pfam PF01389 OmpA-like transmembrane domain 20 172 7.2E-42 T 11-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 AL543_20400 4001e77fd1f5e62ce756953cab226918 327 Gene3D G3DSA:3.30.1330.60 189 321 7.2E-45 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL543_20400 4001e77fd1f5e62ce756953cab226918 327 SUPERFAMILY SSF56925 19 174 4.97E-30 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AL543_03745 934890f16b848856361f83ac49e7b2a2 208 SMART SM00448 2 115 3.0E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_03745 934890f16b848856361f83ac49e7b2a2 208 ProSitePatterns PS00622 LuxR-type HTH domain signature. 159 186 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_03745 934890f16b848856361f83ac49e7b2a2 208 Pfam PF00196 Bacterial regulatory proteins, luxR family 145 199 8.6E-21 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_03745 934890f16b848856361f83ac49e7b2a2 208 Pfam PF00072 Response regulator receiver domain 4 116 3.3E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_03745 934890f16b848856361f83ac49e7b2a2 208 SUPERFAMILY SSF46894 135 205 1.39E-20 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL543_03745 934890f16b848856361f83ac49e7b2a2 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 145 159 2.9E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_03745 934890f16b848856361f83ac49e7b2a2 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 175 2.9E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_03745 934890f16b848856361f83ac49e7b2a2 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 187 2.9E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_03745 934890f16b848856361f83ac49e7b2a2 208 Gene3D G3DSA:3.40.50.12740 2 205 2.7E-58 T 11-10-2018 AL543_03745 934890f16b848856361f83ac49e7b2a2 208 SUPERFAMILY SSF52172 1 125 2.85E-30 T 11-10-2018 IPR011006 CheY-like superfamily AL543_03745 934890f16b848856361f83ac49e7b2a2 208 SMART SM00421 142 199 2.3E-22 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_04390 a0a763b92be71c45886f1248dba5d3fa 151 Pfam PF01381 Helix-turn-helix 9 63 5.6E-18 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL543_04390 a0a763b92be71c45886f1248dba5d3fa 151 Gene3D G3DSA:1.10.260.40 3 135 3.3E-19 T 11-10-2018 AL543_04390 a0a763b92be71c45886f1248dba5d3fa 151 SUPERFAMILY SSF47413 3 66 1.62E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL543_04390 a0a763b92be71c45886f1248dba5d3fa 151 SMART SM00530 8 63 6.4E-17 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL543_04365 a0a763b92be71c45886f1248dba5d3fa 151 Pfam PF01381 Helix-turn-helix 9 63 5.6E-18 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL543_04365 a0a763b92be71c45886f1248dba5d3fa 151 Gene3D G3DSA:1.10.260.40 3 135 3.3E-19 T 11-10-2018 AL543_04365 a0a763b92be71c45886f1248dba5d3fa 151 SUPERFAMILY SSF47413 3 66 1.62E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL543_04365 a0a763b92be71c45886f1248dba5d3fa 151 SMART SM00530 8 63 6.4E-17 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL543_11520 8334db7bb609eb44d58b965835491de3 200 Pfam PF01725 Ham1 family 4 192 2.7E-57 T 11-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 AL543_11520 8334db7bb609eb44d58b965835491de3 200 SUPERFAMILY SSF52972 1 195 6.28E-75 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AL543_11520 8334db7bb609eb44d58b965835491de3 200 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 193 2.8E-62 T 11-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 AL543_11520 8334db7bb609eb44d58b965835491de3 200 Hamap MF_01405 dITP/XTP pyrophosphatase. 2 196 51.993 T 11-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 AL543_11520 8334db7bb609eb44d58b965835491de3 200 Gene3D G3DSA:3.90.950.10 1 198 3.0E-83 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AL543_15205 0c309b63b24c3980f42a6bd5f7d9f205 319 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 72 232 4.1E-56 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AL543_15205 0c309b63b24c3980f42a6bd5f7d9f205 319 SUPERFAMILY SSF55174 4 96 3.87E-12 T 11-10-2018 AL543_15205 0c309b63b24c3980f42a6bd5f7d9f205 319 Gene3D G3DSA:3.30.70.1560 130 220 7.2E-49 T 11-10-2018 AL543_15205 0c309b63b24c3980f42a6bd5f7d9f205 319 SUPERFAMILY SSF55120 68 236 3.42E-42 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL543_15205 0c309b63b24c3980f42a6bd5f7d9f205 319 Gene3D G3DSA:3.10.290.10 1 60 8.2E-20 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AL543_15205 0c309b63b24c3980f42a6bd5f7d9f205 319 SMART SM00363 3 73 6.3E-9 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_15205 0c309b63b24c3980f42a6bd5f7d9f205 319 Pfam PF00849 RNA pseudouridylate synthase 68 154 3.4E-17 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL543_15205 0c309b63b24c3980f42a6bd5f7d9f205 319 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 106 120 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AL543_15205 0c309b63b24c3980f42a6bd5f7d9f205 319 Gene3D G3DSA:3.30.70.580 70 228 7.2E-49 T 11-10-2018 AL543_15205 0c309b63b24c3980f42a6bd5f7d9f205 319 Pfam PF01479 S4 domain 4 36 1.2E-9 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_01180 ca7ee6102028531f955848b43233fa62 387 SUPERFAMILY SSF58104 80 346 4.19E-33 T 11-10-2018 AL543_01180 ca7ee6102028531f955848b43233fa62 387 Gene3D G3DSA:1.10.287.950 57 377 7.2E-31 T 11-10-2018 AL543_01180 ca7ee6102028531f955848b43233fa62 387 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 219 248 4.0E-13 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL543_01180 ca7ee6102028531f955848b43233fa62 387 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 190 217 4.0E-13 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL543_01180 ca7ee6102028531f955848b43233fa62 387 SMART SM00283 92 350 7.4E-5 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_01180 ca7ee6102028531f955848b43233fa62 387 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 170 298 4.7E-23 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_10125 9cd391fc846d4f073bf5fc2b8a00ad35 300 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 187 204 - T 11-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 AL543_10125 9cd391fc846d4f073bf5fc2b8a00ad35 300 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 8 297 1.9E-130 T 11-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 AL543_10125 9cd391fc846d4f073bf5fc2b8a00ad35 300 SUPERFAMILY SSF53697 8 250 7.34E-69 T 11-10-2018 AL543_10125 9cd391fc846d4f073bf5fc2b8a00ad35 300 Pfam PF13580 SIS domain 42 166 2.9E-9 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL543_10125 9cd391fc846d4f073bf5fc2b8a00ad35 300 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 4 297 42.84 T 11-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 AL543_10125 9cd391fc846d4f073bf5fc2b8a00ad35 300 Gene3D G3DSA:1.10.8.1080 221 299 2.1E-29 T 11-10-2018 AL543_10125 9cd391fc846d4f073bf5fc2b8a00ad35 300 Gene3D G3DSA:3.40.50.10490 1 220 1.2E-83 T 11-10-2018 AL543_17335 d6da4be7a81a8540d034ef5b23e60748 168 Pfam PF01863 Protein of unknown function DUF45 99 152 3.6E-11 T 11-10-2018 IPR002725 Protein of unknown function DUF45 AL543_17335 d6da4be7a81a8540d034ef5b23e60748 168 Gene3D G3DSA:3.30.2010.10 86 165 2.2E-6 T 11-10-2018 AL543_09850 337cdd589becf755ccfb6b1683b8ebb6 298 SUPERFAMILY SSF53850 87 292 1.3E-28 T 11-10-2018 AL543_09850 337cdd589becf755ccfb6b1683b8ebb6 298 Gene3D G3DSA:1.10.10.10 1 90 1.5E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_09850 337cdd589becf755ccfb6b1683b8ebb6 298 Gene3D G3DSA:3.40.190.10 165 265 2.4E-26 T 11-10-2018 AL543_09850 337cdd589becf755ccfb6b1683b8ebb6 298 SUPERFAMILY SSF46785 2 87 1.02E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_09850 337cdd589becf755ccfb6b1683b8ebb6 298 Gene3D G3DSA:3.40.190.10 91 286 2.4E-26 T 11-10-2018 AL543_09850 337cdd589becf755ccfb6b1683b8ebb6 298 Pfam PF03466 LysR substrate binding domain 86 289 2.4E-34 T 11-10-2018 IPR005119 LysR, substrate-binding AL543_09850 337cdd589becf755ccfb6b1683b8ebb6 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.6E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_09850 337cdd589becf755ccfb6b1683b8ebb6 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.6E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_09850 337cdd589becf755ccfb6b1683b8ebb6 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.6E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_09850 337cdd589becf755ccfb6b1683b8ebb6 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 3.3E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_06480 86b06ba7c825a1684791c30e93e8c3e1 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 6.6E-18 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL543_06480 86b06ba7c825a1684791c30e93e8c3e1 335 Gene3D G3DSA:3.40.50.2300 160 289 3.1E-74 T 11-10-2018 AL543_06480 86b06ba7c825a1684791c30e93e8c3e1 335 SUPERFAMILY SSF47413 1 60 4.88E-16 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL543_06480 86b06ba7c825a1684791c30e93e8c3e1 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.5E-7 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL543_06480 86b06ba7c825a1684791c30e93e8c3e1 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.5E-7 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL543_06480 86b06ba7c825a1684791c30e93e8c3e1 335 Gene3D G3DSA:3.40.50.2300 56 305 3.1E-74 T 11-10-2018 AL543_06480 86b06ba7c825a1684791c30e93e8c3e1 335 Gene3D G3DSA:1.10.260.40 1 55 3.0E-21 T 11-10-2018 AL543_06480 86b06ba7c825a1684791c30e93e8c3e1 335 Pfam PF13377 Periplasmic binding protein-like domain 169 329 2.9E-37 T 11-10-2018 AL543_06480 86b06ba7c825a1684791c30e93e8c3e1 335 SUPERFAMILY SSF53822 61 331 7.66E-82 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AL543_06480 86b06ba7c825a1684791c30e93e8c3e1 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 11-10-2018 AL543_06480 86b06ba7c825a1684791c30e93e8c3e1 335 SMART SM00354 1 71 1.8E-33 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL543_17665 77b27e273bb5832b6be3cc00c56278ab 449 SUPERFAMILY SSF51735 205 448 2.34E-72 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_17665 77b27e273bb5832b6be3cc00c56278ab 449 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 205 447 6.5E-84 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AL543_17665 77b27e273bb5832b6be3cc00c56278ab 449 Gene3D G3DSA:3.40.50.10860 57 192 9.8E-166 T 11-10-2018 AL543_17665 77b27e273bb5832b6be3cc00c56278ab 449 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 59 187 3.4E-49 T 11-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AL543_17665 77b27e273bb5832b6be3cc00c56278ab 449 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 116 130 3.8E-29 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AL543_17665 77b27e273bb5832b6be3cc00c56278ab 449 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 373 384 3.8E-29 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AL543_17665 77b27e273bb5832b6be3cc00c56278ab 449 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 196 218 3.8E-29 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AL543_17665 77b27e273bb5832b6be3cc00c56278ab 449 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 238 258 3.8E-29 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AL543_17665 77b27e273bb5832b6be3cc00c56278ab 449 SUPERFAMILY SSF53223 10 199 3.17E-73 T 11-10-2018 AL543_17665 77b27e273bb5832b6be3cc00c56278ab 449 Gene3D G3DSA:3.40.50.720 212 374 9.8E-166 T 11-10-2018 AL543_17665 77b27e273bb5832b6be3cc00c56278ab 449 SMART SM00839 207 447 1.4E-85 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AL543_17665 77b27e273bb5832b6be3cc00c56278ab 449 Gene3D G3DSA:1.10.285.10 10 385 9.8E-166 T 11-10-2018 AL543_17665 77b27e273bb5832b6be3cc00c56278ab 449 PIRSF PIRSF000185 24 449 4.7E-110 T 11-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 AL543_05280 f018780864cadcb43edc0cf023e7d4d2 105 SUPERFAMILY SSF47413 12 89 3.85E-19 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL543_05280 f018780864cadcb43edc0cf023e7d4d2 105 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 5 83 9.6E-29 T 11-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 AL543_05280 f018780864cadcb43edc0cf023e7d4d2 105 Gene3D G3DSA:1.10.260.40 1 102 7.0E-27 T 11-10-2018 AL543_05280 f018780864cadcb43edc0cf023e7d4d2 105 Pfam PF01381 Helix-turn-helix 19 68 2.4E-10 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL543_05280 f018780864cadcb43edc0cf023e7d4d2 105 SMART SM00530 14 69 1.5E-5 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL543_00510 f23cdd19eb3bb0feb6bbf2bd1f64afb5 342 Hamap MF_00219 Dihydroorotase [pyrC]. 2 342 47.021 T 11-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL543_00510 f23cdd19eb3bb0feb6bbf2bd1f64afb5 342 SUPERFAMILY SSF51556 1 341 1.58E-146 T 11-10-2018 IPR032466 Metal-dependent hydrolase AL543_00510 f23cdd19eb3bb0feb6bbf2bd1f64afb5 342 ProSitePatterns PS00482 Dihydroorotase signature 1. 11 19 - T 11-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL543_00510 f23cdd19eb3bb0feb6bbf2bd1f64afb5 342 Pfam PF01979 Amidohydrolase family 11 315 2.1E-18 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AL543_00510 f23cdd19eb3bb0feb6bbf2bd1f64afb5 342 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 4 342 3.2E-138 T 11-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL543_00510 f23cdd19eb3bb0feb6bbf2bd1f64afb5 342 PIRSF PIRSF001237 1 342 1.7E-143 T 11-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL543_00510 f23cdd19eb3bb0feb6bbf2bd1f64afb5 342 ProSitePatterns PS00483 Dihydroorotase signature 2. 244 255 - T 11-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL543_00510 f23cdd19eb3bb0feb6bbf2bd1f64afb5 342 Gene3D G3DSA:3.20.20.140 2 342 3.0E-112 T 11-10-2018 AL543_17545 915455f4e9a3512c457b9aa922510e6a 588 SUPERFAMILY SSF53850 123 586 2.79E-57 T 11-10-2018 AL543_17545 915455f4e9a3512c457b9aa922510e6a 588 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 164 318 7.1E-19 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain AL543_17545 915455f4e9a3512c457b9aa922510e6a 588 Pfam PF12793 Sugar transport-related sRNA regulator N-term 6 119 7.5E-32 T 11-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain AL543_17545 915455f4e9a3512c457b9aa922510e6a 588 Gene3D G3DSA:3.40.190.10 121 333 9.9E-28 T 11-10-2018 AL543_20540 3e6da29f72739d10ab93c71450b8dc52 531 Pfam PF01464 Transglycosylase SLT domain 128 231 5.2E-24 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 AL543_20540 3e6da29f72739d10ab93c71450b8dc52 531 SUPERFAMILY SSF54106 477 524 1.18E-10 T 11-10-2018 AL543_20540 3e6da29f72739d10ab93c71450b8dc52 531 Gene3D G3DSA:3.10.350.10 477 525 1.5E-15 T 11-10-2018 IPR036779 LysM domain superfamily AL543_20540 3e6da29f72739d10ab93c71450b8dc52 531 Pfam PF01476 LysM domain 349 391 1.1E-11 T 11-10-2018 IPR018392 LysM domain AL543_20540 3e6da29f72739d10ab93c71450b8dc52 531 Pfam PF01476 LysM domain 423 465 1.5E-11 T 11-10-2018 IPR018392 LysM domain AL543_20540 3e6da29f72739d10ab93c71450b8dc52 531 Pfam PF01476 LysM domain 480 522 4.5E-13 T 11-10-2018 IPR018392 LysM domain AL543_20540 3e6da29f72739d10ab93c71450b8dc52 531 SMART SM00257 479 523 4.6E-13 T 11-10-2018 IPR018392 LysM domain AL543_20540 3e6da29f72739d10ab93c71450b8dc52 531 SMART SM00257 422 466 5.7E-13 T 11-10-2018 IPR018392 LysM domain AL543_20540 3e6da29f72739d10ab93c71450b8dc52 531 SMART SM00257 348 391 7.6E-13 T 11-10-2018 IPR018392 LysM domain AL543_20540 3e6da29f72739d10ab93c71450b8dc52 531 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 138 166 - T 11-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AL543_20540 3e6da29f72739d10ab93c71450b8dc52 531 SUPERFAMILY SSF54106 421 466 5.75E-11 T 11-10-2018 AL543_20540 3e6da29f72739d10ab93c71450b8dc52 531 Gene3D G3DSA:3.10.350.10 343 402 1.9E-14 T 11-10-2018 IPR036779 LysM domain superfamily AL543_20540 3e6da29f72739d10ab93c71450b8dc52 531 Gene3D G3DSA:3.10.350.10 409 474 4.0E-15 T 11-10-2018 IPR036779 LysM domain superfamily AL543_20540 3e6da29f72739d10ab93c71450b8dc52 531 Gene3D G3DSA:1.10.530.10 115 267 2.0E-30 T 11-10-2018 AL543_20540 3e6da29f72739d10ab93c71450b8dc52 531 SUPERFAMILY SSF54106 347 391 2.35E-10 T 11-10-2018 AL543_20540 3e6da29f72739d10ab93c71450b8dc52 531 SUPERFAMILY SSF53955 116 268 1.97E-42 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AL543_00955 2d1f686b063a218df53deb91a798a053 165 SMART SM00347 50 151 6.2E-20 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL543_00955 2d1f686b063a218df53deb91a798a053 165 Pfam PF12802 MarR family 57 115 2.1E-12 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL543_00955 2d1f686b063a218df53deb91a798a053 165 Gene3D G3DSA:1.10.10.10 4 164 1.4E-34 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_00955 2d1f686b063a218df53deb91a798a053 165 SUPERFAMILY SSF46785 23 162 3.71E-32 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_00955 2d1f686b063a218df53deb91a798a053 165 ProSitePatterns PS01117 MarR-type HTH domain signature. 90 124 - T 11-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AL543_00955 2d1f686b063a218df53deb91a798a053 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 75 91 1.8E-15 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL543_00955 2d1f686b063a218df53deb91a798a053 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 141 161 1.8E-15 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL543_00955 2d1f686b063a218df53deb91a798a053 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 92 107 1.8E-15 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL543_00955 2d1f686b063a218df53deb91a798a053 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 111 127 1.8E-15 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL543_14510 61d1d5974bafc7cc5946036534a0ccf8 598 Pfam PF06276 Ferric iron reductase FhuF-like transporter 413 574 1.2E-28 T 11-10-2018 IPR022770 Ferric iron reductase FhuF domain AL543_14510 61d1d5974bafc7cc5946036534a0ccf8 598 Pfam PF04183 IucA / IucC family 148 383 1.4E-55 T 11-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 AL543_14510 61d1d5974bafc7cc5946036534a0ccf8 598 Gene3D G3DSA:1.10.510.40 372 543 5.8E-14 T 11-10-2018 AL543_09800 4c40642a60183bd3bbaf74cb6a25c130 91 SUPERFAMILY SSF160272 1 86 1.12E-29 T 11-10-2018 IPR036692 Shew3726-like superfamily AL543_09800 4c40642a60183bd3bbaf74cb6a25c130 91 Gene3D G3DSA:3.30.160.140 1 90 8.5E-34 T 11-10-2018 IPR036692 Shew3726-like superfamily AL543_09800 4c40642a60183bd3bbaf74cb6a25c130 91 Pfam PF07369 Protein of unknown function (DUF1488) 5 85 4.3E-24 T 11-10-2018 IPR009962 Protein of unknown function DUF1488 AL543_19050 039e62c5fbec7c5ae1d7534c49e1f474 405 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 9 82 4.1E-25 T 11-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 AL543_19050 039e62c5fbec7c5ae1d7534c49e1f474 405 Pfam PF07670 Nucleoside recognition 93 188 3.0E-7 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AL543_19050 039e62c5fbec7c5ae1d7534c49e1f474 405 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 5 401 5.6E-138 T 11-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 AL543_19050 039e62c5fbec7c5ae1d7534c49e1f474 405 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 195 402 4.2E-73 T 11-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 AL543_12165 2e4de7cce02e94b7ea59d4767c7c01b4 470 SUPERFAMILY SSF53738 2 187 7.65E-40 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL543_12165 2e4de7cce02e94b7ea59d4767c7c01b4 470 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 2 137 2.9E-38 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL543_12165 2e4de7cce02e94b7ea59d4767c7c01b4 470 Gene3D G3DSA:3.40.120.10 263 370 8.7E-60 T 11-10-2018 AL543_12165 2e4de7cce02e94b7ea59d4767c7c01b4 470 SUPERFAMILY SSF53738 250 379 4.71E-30 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL543_12165 2e4de7cce02e94b7ea59d4767c7c01b4 470 SUPERFAMILY SSF55957 374 466 4.06E-19 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL543_12165 2e4de7cce02e94b7ea59d4767c7c01b4 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 2.1E-11 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL543_12165 2e4de7cce02e94b7ea59d4767c7c01b4 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 214 227 2.1E-11 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL543_12165 2e4de7cce02e94b7ea59d4767c7c01b4 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 242 257 2.1E-11 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL543_12165 2e4de7cce02e94b7ea59d4767c7c01b4 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 180 199 2.1E-11 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL543_12165 2e4de7cce02e94b7ea59d4767c7c01b4 470 Gene3D G3DSA:3.40.120.10 171 365 8.7E-60 T 11-10-2018 AL543_12165 2e4de7cce02e94b7ea59d4767c7c01b4 470 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 417 465 1.4E-9 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL543_12165 2e4de7cce02e94b7ea59d4767c7c01b4 470 Gene3D G3DSA:3.30.310.50 383 469 2.4E-16 T 11-10-2018 AL543_12165 2e4de7cce02e94b7ea59d4767c7c01b4 470 Gene3D G3DSA:3.40.120.10 1 170 1.4E-46 T 11-10-2018 AL543_12165 2e4de7cce02e94b7ea59d4767c7c01b4 470 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 162 262 1.6E-24 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL543_12165 2e4de7cce02e94b7ea59d4767c7c01b4 470 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 267 378 7.0E-26 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL543_06820 a97052df6792561fc2ff8158ca59619a 453 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 448 7.2E-146 T 11-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AL543_06820 a97052df6792561fc2ff8158ca59619a 453 SUPERFAMILY SSF53623 100 311 5.36E-55 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL543_06820 a97052df6792561fc2ff8158ca59619a 453 SUPERFAMILY SSF63418 1 95 1.57E-24 T 11-10-2018 IPR035911 MurE/MurF, N-terminal AL543_06820 a97052df6792561fc2ff8158ca59619a 453 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 449 32.957 T 11-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AL543_06820 a97052df6792561fc2ff8158ca59619a 453 Gene3D G3DSA:3.40.1190.10 81 312 1.7E-77 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL543_06820 a97052df6792561fc2ff8158ca59619a 453 Pfam PF08245 Mur ligase middle domain 105 293 1.3E-46 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AL543_06820 a97052df6792561fc2ff8158ca59619a 453 Pfam PF02875 Mur ligase family, glutamate ligase domain 314 393 2.2E-11 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 AL543_06820 a97052df6792561fc2ff8158ca59619a 453 SUPERFAMILY SSF53244 314 448 5.72E-32 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL543_06820 a97052df6792561fc2ff8158ca59619a 453 Gene3D G3DSA:3.40.1390.10 1 80 7.0E-25 T 11-10-2018 AL543_06820 a97052df6792561fc2ff8158ca59619a 453 Pfam PF01225 Mur ligase family, catalytic domain 24 90 3.5E-8 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AL543_06820 a97052df6792561fc2ff8158ca59619a 453 Gene3D G3DSA:3.90.190.20 313 453 2.2E-34 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL543_07445 a357b8ecf28f5fbf90cd245c60d777f4 421 Gene3D G3DSA:3.65.10.10 22 230 3.9E-174 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 AL543_07445 a357b8ecf28f5fbf90cd245c60d777f4 421 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 44.142 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AL543_07445 a357b8ecf28f5fbf90cd245c60d777f4 421 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 10 407 8.1E-124 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AL543_07445 a357b8ecf28f5fbf90cd245c60d777f4 421 Gene3D G3DSA:3.65.10.10 13 414 3.9E-174 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 AL543_07445 a357b8ecf28f5fbf90cd245c60d777f4 421 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 416 6.3E-185 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AL543_07445 a357b8ecf28f5fbf90cd245c60d777f4 421 SUPERFAMILY SSF55205 6 418 3.11E-143 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AL543_17975 9ed62787db13bb6c97e96b12b7f70869 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.9E-27 T 11-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 AL543_17975 9ed62787db13bb6c97e96b12b7f70869 72 Gene3D G3DSA:2.40.50.140 1 72 7.1E-37 T 11-10-2018 AL543_17975 9ed62787db13bb6c97e96b12b7f70869 72 SUPERFAMILY SSF50249 1 70 1.0E-28 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL543_17975 9ed62787db13bb6c97e96b12b7f70869 72 SMART SM00316 4 72 3.7E-6 T 11-10-2018 IPR022967 RNA-binding domain, S1 AL543_17975 9ed62787db13bb6c97e96b12b7f70869 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 1.9E-38 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 AL543_17975 9ed62787db13bb6c97e96b12b7f70869 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.238 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 AL543_14365 8970684bcec89b254ac626f07ef94372 299 Gene3D G3DSA:3.40.190.290 98 299 1.2E-78 T 11-10-2018 AL543_14365 8970684bcec89b254ac626f07ef94372 299 Gene3D G3DSA:1.10.10.10 9 97 2.4E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_14365 8970684bcec89b254ac626f07ef94372 299 Pfam PF03466 LysR substrate binding domain 96 294 2.2E-41 T 11-10-2018 IPR005119 LysR, substrate-binding AL543_14365 8970684bcec89b254ac626f07ef94372 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 70 1.0E-12 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_14365 8970684bcec89b254ac626f07ef94372 299 SUPERFAMILY SSF53850 96 296 3.53E-39 T 11-10-2018 AL543_14365 8970684bcec89b254ac626f07ef94372 299 SUPERFAMILY SSF46785 9 92 6.91E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_19630 241b9c5d5d4f9fe553e36042a85d8f29 379 SUPERFAMILY SSF52738 188 373 2.88E-64 T 11-10-2018 IPR035909 Methylesterase CheB, C-terminal AL543_19630 241b9c5d5d4f9fe553e36042a85d8f29 379 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 377 39.132 T 11-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AL543_19630 241b9c5d5d4f9fe553e36042a85d8f29 379 Pfam PF01339 CheB methylesterase 194 371 4.0E-59 T 11-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AL543_19630 241b9c5d5d4f9fe553e36042a85d8f29 379 SMART SM00448 3 126 2.9E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_19630 241b9c5d5d4f9fe553e36042a85d8f29 379 Gene3D G3DSA:3.40.50.2300 2 129 1.4E-31 T 11-10-2018 AL543_19630 241b9c5d5d4f9fe553e36042a85d8f29 379 Gene3D G3DSA:3.40.50.180 186 375 2.9E-65 T 11-10-2018 IPR035909 Methylesterase CheB, C-terminal AL543_19630 241b9c5d5d4f9fe553e36042a85d8f29 379 SUPERFAMILY SSF52172 2 109 1.18E-26 T 11-10-2018 IPR011006 CheY-like superfamily AL543_19630 241b9c5d5d4f9fe553e36042a85d8f29 379 PIRSF PIRSF000876 1 377 3.8E-128 T 11-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AL543_19630 241b9c5d5d4f9fe553e36042a85d8f29 379 Pfam PF00072 Response regulator receiver domain 5 109 3.1E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_10855 50c955327c8934691ea19e8e3f4781ae 326 Pfam PF01145 SPFH domain / Band 7 family 22 233 5.5E-29 T 11-10-2018 IPR001107 Band 7 domain AL543_10855 50c955327c8934691ea19e8e3f4781ae 326 SUPERFAMILY SSF117892 56 223 1.1E-22 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily AL543_10855 50c955327c8934691ea19e8e3f4781ae 326 SMART SM00244 18 218 5.0E-49 T 11-10-2018 IPR001107 Band 7 domain AL543_10855 50c955327c8934691ea19e8e3f4781ae 326 TIGRFAM TIGR01932 hflC: HflC protein 1 318 3.5E-141 T 11-10-2018 IPR010200 HflC GO:0016021|GO:0052547 AL543_10855 50c955327c8934691ea19e8e3f4781ae 326 PIRSF PIRSF005651 1 326 1.6E-93 T 11-10-2018 IPR010200 HflC GO:0016021|GO:0052547 AL543_04210 ce1e864ba4cdf03479685f7c40bdb5e2 222 Pfam PF02798 Glutathione S-transferase, N-terminal domain 5 77 1.9E-14 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL543_04210 ce1e864ba4cdf03479685f7c40bdb5e2 222 Pfam PF00043 Glutathione S-transferase, C-terminal domain 113 193 8.8E-14 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal AL543_04210 ce1e864ba4cdf03479685f7c40bdb5e2 222 Gene3D G3DSA:1.20.1050.10 84 192 2.1E-85 T 11-10-2018 AL543_04210 ce1e864ba4cdf03479685f7c40bdb5e2 222 SUPERFAMILY SSF52833 4 81 4.31E-22 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL543_04210 ce1e864ba4cdf03479685f7c40bdb5e2 222 SUPERFAMILY SSF47616 74 202 3.27E-37 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AL543_04210 ce1e864ba4cdf03479685f7c40bdb5e2 222 Gene3D G3DSA:3.40.30.10 2 202 2.1E-85 T 11-10-2018 AL543_12515 20a9e62c88c2431cec7564b809ed9d7e 296 Gene3D G3DSA:1.10.10.10 3 93 4.2E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_12515 20a9e62c88c2431cec7564b809ed9d7e 296 Pfam PF03466 LysR substrate binding domain 97 288 6.4E-10 T 11-10-2018 IPR005119 LysR, substrate-binding AL543_12515 20a9e62c88c2431cec7564b809ed9d7e 296 SUPERFAMILY SSF53850 90 288 1.76E-21 T 11-10-2018 AL543_12515 20a9e62c88c2431cec7564b809ed9d7e 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 9.2E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_12515 20a9e62c88c2431cec7564b809ed9d7e 296 Gene3D G3DSA:3.40.190.10 100 168 1.2E-6 T 11-10-2018 AL543_12515 20a9e62c88c2431cec7564b809ed9d7e 296 SUPERFAMILY SSF46785 2 85 2.22E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_12515 20a9e62c88c2431cec7564b809ed9d7e 296 Gene3D G3DSA:3.40.190.10 169 265 1.2E-6 T 11-10-2018 AL543_07350 99a21569b3df61688d359d3bfbf8f0a4 356 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 354 1.4E-131 T 11-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 AL543_07350 99a21569b3df61688d359d3bfbf8f0a4 356 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 352 1.8E-68 T 11-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 AL543_13775 e587820909fac09243926dcc720462e0 365 Gene3D G3DSA:3.40.50.2000 79 359 2.1E-56 T 11-10-2018 AL543_13775 e587820909fac09243926dcc720462e0 365 Gene3D G3DSA:3.40.50.2000 174 346 2.1E-56 T 11-10-2018 AL543_13775 e587820909fac09243926dcc720462e0 365 Pfam PF00534 Glycosyl transferases group 1 188 340 2.2E-34 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AL543_13775 e587820909fac09243926dcc720462e0 365 SUPERFAMILY SSF53756 24 364 1.1E-64 T 11-10-2018 AL543_02235 4fabd0989f727797c09e8dd6b6ca2a5c 115 Pfam PF11777 Protein of unknown function (DUF3316) 2 111 4.7E-20 T 11-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 AL543_02235 4fabd0989f727797c09e8dd6b6ca2a5c 115 PIRSF PIRSF028299 1 114 1.6E-25 T 11-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 AL543_07590 a89a3cb4f2ce3f706c2b387c8fb81383 176 Gene3D G3DSA:3.90.80.10 1 175 2.9E-67 T 11-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AL543_07590 a89a3cb4f2ce3f706c2b387c8fb81383 176 SUPERFAMILY SSF50324 3 174 1.96E-65 T 11-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AL543_07590 a89a3cb4f2ce3f706c2b387c8fb81383 176 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AL543_07590 a89a3cb4f2ce3f706c2b387c8fb81383 176 Pfam PF00719 Inorganic pyrophosphatase 18 173 2.0E-52 T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AL543_07590 a89a3cb4f2ce3f706c2b387c8fb81383 176 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.05 T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AL543_03885 813292010e4f669322ff2b91bc8856e0 354 Gene3D G3DSA:2.40.30.170 35 294 1.8E-37 T 11-10-2018 AL543_03885 813292010e4f669322ff2b91bc8856e0 354 Gene3D G3DSA:1.10.287.470 77 199 1.8E-37 T 11-10-2018 AL543_03885 813292010e4f669322ff2b91bc8856e0 354 Pfam PF13533 Biotin-lipoyl like 44 88 1.4E-15 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AL543_03885 813292010e4f669322ff2b91bc8856e0 354 Pfam PF13437 HlyD family secretion protein 200 272 4.2E-8 T 11-10-2018 AL543_03885 813292010e4f669322ff2b91bc8856e0 354 Gene3D G3DSA:2.40.50.100 43 234 1.8E-37 T 11-10-2018 AL543_03885 813292010e4f669322ff2b91bc8856e0 354 SUPERFAMILY SSF111369 38 96 3.01E-8 T 11-10-2018 AL543_03885 813292010e4f669322ff2b91bc8856e0 354 SUPERFAMILY SSF111369 178 248 2.09E-5 T 11-10-2018 AL543_10875 a1d1533e3ec6e25db3265c8e15906279 259 Gene3D G3DSA:1.10.287.460 30 144 2.3E-33 T 11-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 AL543_10875 a1d1533e3ec6e25db3265c8e15906279 259 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 34 155 2.5E-34 T 11-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AL543_10875 a1d1533e3ec6e25db3265c8e15906279 259 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 162 249 2.2E-30 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AL543_10875 a1d1533e3ec6e25db3265c8e15906279 259 Gene3D G3DSA:3.10.50.40 145 258 9.0E-43 T 11-10-2018 AL543_10875 a1d1533e3ec6e25db3265c8e15906279 259 SUPERFAMILY SSF54534 46 251 2.39E-64 T 11-10-2018 AL543_07690 7fde651adbc4538653782fbe46b32a42 149 Gene3D G3DSA:3.40.630.30 1 149 5.8E-45 T 11-10-2018 AL543_07690 7fde651adbc4538653782fbe46b32a42 149 Pfam PF13673 Acetyltransferase (GNAT) domain 44 148 1.9E-16 T 11-10-2018 IPR000182 GNAT domain AL543_07690 7fde651adbc4538653782fbe46b32a42 149 SUPERFAMILY SSF55729 1 148 4.8E-38 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL543_06110 680d8cba262b9cdec86e8e0ac1d7eae5 402 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 391 5.8E-38 T 11-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AL543_06110 680d8cba262b9cdec86e8e0ac1d7eae5 402 Gene3D G3DSA:1.10.1740.10 312 402 1.1E-26 T 11-10-2018 AL543_06110 680d8cba262b9cdec86e8e0ac1d7eae5 402 PIRSF PIRSF006205 1 402 3.2E-152 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AL543_06110 680d8cba262b9cdec86e8e0ac1d7eae5 402 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 396 1.5E-162 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AL543_06110 680d8cba262b9cdec86e8e0ac1d7eae5 402 SUPERFAMILY SSF69055 302 399 1.57E-28 T 11-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AL543_06110 680d8cba262b9cdec86e8e0ac1d7eae5 402 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 396 46.273 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AL543_06110 680d8cba262b9cdec86e8e0ac1d7eae5 402 SUPERFAMILY SSF55347 126 274 1.67E-62 T 11-10-2018 AL543_06110 680d8cba262b9cdec86e8e0ac1d7eae5 402 SUPERFAMILY SSF51735 2 150 5.81E-48 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_06110 680d8cba262b9cdec86e8e0ac1d7eae5 402 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 1.2E-36 T 11-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AL543_06110 680d8cba262b9cdec86e8e0ac1d7eae5 402 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 5.7E-47 T 11-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AL543_06110 680d8cba262b9cdec86e8e0ac1d7eae5 402 Gene3D G3DSA:3.40.50.720 1 150 6.9E-54 T 11-10-2018 AL543_06870 3b0435d4b66ce1cc2850c4b63eaaf085 634 Pfam PF00149 Calcineurin-like phosphoesterase 29 247 5.0E-13 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AL543_06870 3b0435d4b66ce1cc2850c4b63eaaf085 634 Gene3D G3DSA:3.90.780.10 330 545 1.5E-31 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL543_06870 3b0435d4b66ce1cc2850c4b63eaaf085 634 SUPERFAMILY SSF55816 337 548 1.57E-25 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL543_06870 3b0435d4b66ce1cc2850c4b63eaaf085 634 ProSitePatterns PS00786 5'-nucleotidase signature 2. 107 118 - T 11-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL543_06870 3b0435d4b66ce1cc2850c4b63eaaf085 634 Gene3D G3DSA:3.60.21.10 22 326 2.3E-76 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like AL543_06870 3b0435d4b66ce1cc2850c4b63eaaf085 634 SUPERFAMILY SSF56300 20 327 3.8E-76 T 11-10-2018 AL543_06870 3b0435d4b66ce1cc2850c4b63eaaf085 634 PRINTS PR01607 Apyrase family signature 230 253 3.9E-13 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL543_06870 3b0435d4b66ce1cc2850c4b63eaaf085 634 PRINTS PR01607 Apyrase family signature 257 277 3.9E-13 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL543_06870 3b0435d4b66ce1cc2850c4b63eaaf085 634 PRINTS PR01607 Apyrase family signature 203 220 3.9E-13 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL543_06870 3b0435d4b66ce1cc2850c4b63eaaf085 634 PRINTS PR01607 Apyrase family signature 26 44 3.9E-13 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL543_06870 3b0435d4b66ce1cc2850c4b63eaaf085 634 Pfam PF02872 5'-nucleotidase, C-terminal domain 341 492 5.9E-22 T 11-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL543_05665 2ff65a770de90059b093015709bd888e 435 SUPERFAMILY SSF53383 14 434 7.03E-180 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL543_05665 2ff65a770de90059b093015709bd888e 435 Pfam PF00464 Serine hydroxymethyltransferase 24 399 4.5E-174 T 11-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AL543_05665 2ff65a770de90059b093015709bd888e 435 PIRSF PIRSF000412 6 435 8.5E-169 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AL543_05665 2ff65a770de90059b093015709bd888e 435 Gene3D G3DSA:3.90.1150.10 25 406 3.9E-186 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL543_05665 2ff65a770de90059b093015709bd888e 435 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 236 252 - T 11-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AL543_05665 2ff65a770de90059b093015709bd888e 435 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 21 435 52.732 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AL543_05665 2ff65a770de90059b093015709bd888e 435 Gene3D G3DSA:3.40.640.10 51 302 3.9E-186 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL543_16890 0a025e9518e31b83ab486f19403fa23f 677 SUPERFAMILY SSF55874 502 664 1.83E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_16890 0a025e9518e31b83ab486f19403fa23f 677 SMART SM00387 555 666 2.1E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_16890 0a025e9518e31b83ab486f19403fa23f 677 Pfam PF00512 His Kinase A (phospho-acceptor) domain 445 510 2.5E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_16890 0a025e9518e31b83ab486f19403fa23f 677 Pfam PF17202 Single cache domain 3 201 314 1.2E-25 T 11-10-2018 IPR033463 Single cache domain 3 AL543_16890 0a025e9518e31b83ab486f19403fa23f 677 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 559 664 2.2E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_16890 0a025e9518e31b83ab486f19403fa23f 677 SMART SM00388 445 512 1.0E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_16890 0a025e9518e31b83ab486f19403fa23f 677 Gene3D G3DSA:1.10.287.130 437 510 8.7E-21 T 11-10-2018 AL543_16890 0a025e9518e31b83ab486f19403fa23f 677 Gene3D G3DSA:3.30.565.10 517 673 4.8E-40 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_16890 0a025e9518e31b83ab486f19403fa23f 677 PRINTS PR00344 Bacterial sensor protein C-terminal signature 650 663 2.6E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_16890 0a025e9518e31b83ab486f19403fa23f 677 PRINTS PR00344 Bacterial sensor protein C-terminal signature 626 644 2.6E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_16890 0a025e9518e31b83ab486f19403fa23f 677 PRINTS PR00344 Bacterial sensor protein C-terminal signature 615 625 2.6E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_16890 0a025e9518e31b83ab486f19403fa23f 677 PRINTS PR00344 Bacterial sensor protein C-terminal signature 597 611 2.6E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_16890 0a025e9518e31b83ab486f19403fa23f 677 SUPERFAMILY SSF47384 440 509 5.3E-11 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL543_16890 0a025e9518e31b83ab486f19403fa23f 677 SUPERFAMILY SSF103190 150 307 1.18E-14 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily AL543_17210 49e5123c683a073a105f3cc21ad7e3a7 1526 SMART SM01276 1092 1395 1.1E-89 T 11-10-2018 IPR031161 Peptidase family M60 domain AL543_17210 49e5123c683a073a105f3cc21ad7e3a7 1526 Pfam PF17291 N-terminal domain of M60-like peptidases 1089 1172 6.0E-8 T 11-10-2018 IPR035423 M60-like domain, N-terminal AL543_17210 49e5123c683a073a105f3cc21ad7e3a7 1526 Pfam PF13322 Domain of unknown function (DUF4092) 398 571 1.6E-94 T 11-10-2018 IPR025385 Domain of unknown function DUF4092 AL543_17210 49e5123c683a073a105f3cc21ad7e3a7 1526 Gene3D G3DSA:1.10.390.30 1325 1483 5.1E-13 T 11-10-2018 AL543_17210 49e5123c683a073a105f3cc21ad7e3a7 1526 Pfam PF13402 Peptidase M60, enhancin and enhancin-like 1192 1477 3.2E-40 T 11-10-2018 IPR031161 Peptidase family M60 domain AL543_20135 f1e7a572dc27135fa08a8a4af3e47d7b 283 Gene3D G3DSA:3.20.20.70 1 283 3.3E-102 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_20135 f1e7a572dc27135fa08a8a4af3e47d7b 283 Pfam PF00793 DAHP synthetase I family 10 275 4.0E-70 T 11-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AL543_20135 f1e7a572dc27135fa08a8a4af3e47d7b 283 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 2.8E-116 T 11-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AL543_20135 f1e7a572dc27135fa08a8a4af3e47d7b 283 SUPERFAMILY SSF51569 3 278 3.02E-104 T 11-10-2018 AL543_20135 f1e7a572dc27135fa08a8a4af3e47d7b 283 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 48.225 T 11-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AL543_12830 acb2a80cbd04b99d19e45ee9b1e04a0f 229 Gene3D G3DSA:3.40.50.2300 1 126 5.3E-39 T 11-10-2018 AL543_12830 acb2a80cbd04b99d19e45ee9b1e04a0f 229 SUPERFAMILY SSF52172 3 184 1.51E-43 T 11-10-2018 IPR011006 CheY-like superfamily AL543_12830 acb2a80cbd04b99d19e45ee9b1e04a0f 229 Gene3D G3DSA:1.10.10.10 127 228 7.6E-41 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_12830 acb2a80cbd04b99d19e45ee9b1e04a0f 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 1.0E-28 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL543_12830 acb2a80cbd04b99d19e45ee9b1e04a0f 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 2.4E-113 T 11-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 AL543_12830 acb2a80cbd04b99d19e45ee9b1e04a0f 229 SMART SM00862 150 225 2.0E-28 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL543_12830 acb2a80cbd04b99d19e45ee9b1e04a0f 229 Pfam PF00072 Response regulator receiver domain 5 116 5.3E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_12830 acb2a80cbd04b99d19e45ee9b1e04a0f 229 SMART SM00448 3 116 2.9E-45 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_11095 4f9a35bde3468e179509cbaef35e4d04 1226 SUPERFAMILY SSF82282 8 400 1.7E-117 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 AL543_11095 4f9a35bde3468e179509cbaef35e4d04 1226 SUPERFAMILY SSF47644 654 740 9.94E-30 T 11-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL543_11095 4f9a35bde3468e179509cbaef35e4d04 1226 Gene3D G3DSA:3.40.50.280 745 896 8.9E-55 T 11-10-2018 AL543_11095 4f9a35bde3468e179509cbaef35e4d04 1226 TIGRFAM TIGR02082 metH: methionine synthase 13 1194 0.0 T 11-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL543_11095 4f9a35bde3468e179509cbaef35e4d04 1226 Gene3D G3DSA:3.20.20.330 3 341 3.7E-127 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 AL543_11095 4f9a35bde3468e179509cbaef35e4d04 1226 PIRSF PIRSF000381 3 1197 0.0 T 11-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL543_11095 4f9a35bde3468e179509cbaef35e4d04 1226 Pfam PF02310 B12 binding domain 749 843 7.4E-19 T 11-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 AL543_11095 4f9a35bde3468e179509cbaef35e4d04 1226 SUPERFAMILY SSF51717 357 631 9.03E-87 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL543_11095 4f9a35bde3468e179509cbaef35e4d04 1226 Gene3D G3DSA:3.20.20.20 342 643 4.4E-131 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL543_11095 4f9a35bde3468e179509cbaef35e4d04 1226 Pfam PF00809 Pterin binding enzyme 361 599 1.8E-59 T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL543_11095 4f9a35bde3468e179509cbaef35e4d04 1226 SUPERFAMILY SSF52242 744 895 3.01E-45 T 11-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 AL543_11095 4f9a35bde3468e179509cbaef35e4d04 1226 Pfam PF02574 Homocysteine S-methyltransferase 18 326 7.6E-80 T 11-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 AL543_11095 4f9a35bde3468e179509cbaef35e4d04 1226 SUPERFAMILY SSF56507 904 1225 1.96E-130 T 11-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL543_11095 4f9a35bde3468e179509cbaef35e4d04 1226 Gene3D G3DSA:1.10.288.10 938 1094 6.6E-146 T 11-10-2018 AL543_11095 4f9a35bde3468e179509cbaef35e4d04 1226 Gene3D G3DSA:1.10.1240.10 650 738 4.7E-41 T 11-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL543_11095 4f9a35bde3468e179509cbaef35e4d04 1226 Pfam PF02607 B12 binding domain 660 734 1.4E-26 T 11-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL543_11095 4f9a35bde3468e179509cbaef35e4d04 1226 Gene3D G3DSA:3.10.196.10 909 1224 6.6E-146 T 11-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL543_11095 4f9a35bde3468e179509cbaef35e4d04 1226 SMART SM01018 658 741 1.4E-45 T 11-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL543_11095 4f9a35bde3468e179509cbaef35e4d04 1226 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 940 1210 2.4E-122 T 11-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL543_17805 68a207d08024f1de69a52264ba4a1bc3 181 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 175 18.629 T 11-10-2018 IPR006008 Intracellular septation protein A GO:0016021 AL543_17805 68a207d08024f1de69a52264ba4a1bc3 181 Pfam PF04279 Intracellular septation protein A 1 174 3.6E-69 T 11-10-2018 IPR006008 Intracellular septation protein A GO:0016021 AL543_17805 68a207d08024f1de69a52264ba4a1bc3 181 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 177 1.3E-65 T 11-10-2018 IPR006008 Intracellular septation protein A GO:0016021 AL543_05265 7872b5850d4a4200c8fa6ffea1409f04 119 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 112 2.0E-10 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL543_05265 7872b5850d4a4200c8fa6ffea1409f04 119 Gene3D G3DSA:3.10.180.10 1 118 1.7E-21 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL543_05265 7872b5850d4a4200c8fa6ffea1409f04 119 SUPERFAMILY SSF54593 6 117 2.01E-23 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL543_06940 95b4cc107c5e15c776690c29cc5cace3 65 SUPERFAMILY SSF57716 5 63 1.07E-21 T 11-10-2018 AL543_06940 95b4cc107c5e15c776690c29cc5cace3 65 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 4 60 18.592 T 11-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 AL543_06940 95b4cc107c5e15c776690c29cc5cace3 65 Pfam PF03884 DNA gyrase inhibitor YacG 8 58 1.5E-24 T 11-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 AL543_06940 95b4cc107c5e15c776690c29cc5cace3 65 Gene3D G3DSA:3.30.50.10 1 65 1.7E-24 T 11-10-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 AL543_19165 678f0a89b12dbb75ffcae13f0f988023 441 Pfam PF13286 Phosphohydrolase-associated domain 343 433 4.7E-28 T 11-10-2018 IPR026875 Phosphohydrolase-associated domain AL543_19165 678f0a89b12dbb75ffcae13f0f988023 441 Pfam PF01966 HD domain 62 143 5.7E-7 T 11-10-2018 IPR006674 HD domain AL543_19165 678f0a89b12dbb75ffcae13f0f988023 441 SUPERFAMILY SSF109604 23 437 4.21E-81 T 11-10-2018 AL543_19165 678f0a89b12dbb75ffcae13f0f988023 441 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 24 436 7.2E-141 T 11-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 AL543_19165 678f0a89b12dbb75ffcae13f0f988023 441 SMART SM00471 58 264 4.4E-8 T 11-10-2018 IPR003607 HD/PDEase domain AL543_19165 678f0a89b12dbb75ffcae13f0f988023 441 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 5 435 34.539 T 11-10-2018 IPR023023 dNTP triphosphohydrolase, type 2 GO:0016793 AL543_02825 5f825053688ae2232f74395663e57fc4 252 Pfam PF13230 Glutamine amidotransferases class-II 25 215 1.6E-20 T 11-10-2018 IPR026869 Putative glutamine amidotransferase type 2 AL543_02825 5f825053688ae2232f74395663e57fc4 252 SUPERFAMILY SSF56235 2 247 4.29E-37 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL543_02825 5f825053688ae2232f74395663e57fc4 252 Gene3D G3DSA:3.60.20.10 1 251 2.0E-86 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL543_09075 6f119b7f144d14cba0bedc1461e03e79 544 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 539 57.12 T 11-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 AL543_09075 6f119b7f144d14cba0bedc1461e03e79 544 SUPERFAMILY SSF56112 94 436 4.33E-49 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AL543_09075 6f119b7f144d14cba0bedc1461e03e79 544 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 6 445 1.8E-179 T 11-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 AL543_09075 6f119b7f144d14cba0bedc1461e03e79 544 Pfam PF03109 ABC1 family 111 230 2.1E-37 T 11-10-2018 IPR004147 UbiB domain AL543_05950 ad479bf6a82af35e3f57d8c889a05f1c 204 Pfam PF01810 LysE type translocator 15 202 5.1E-34 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL543_05950 ad479bf6a82af35e3f57d8c889a05f1c 204 PIRSF PIRSF006324 1 204 1.1E-41 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL543_18270 1f2a12b674e2dae74dd6d9728fa96678 150 Pfam PF06610 L-alanine exporter 8 142 3.5E-68 T 11-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 AL543_18270 1f2a12b674e2dae74dd6d9728fa96678 150 ProDom PD090021 MEMBRANE YGAW TRANSMEMBRANE INNER VV2263 Y3636 VC1828 VP1070 15 142 6.0E-70 T 11-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 AL543_18270 1f2a12b674e2dae74dd6d9728fa96678 150 Hamap MF_00914 L-alanine exporter AlaE [alaE]. 2 145 32.174 T 11-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 AL543_06075 df57641e1e0f7a590adfb1b4638aa2db 381 SUPERFAMILY SSF53756 6 378 3.14E-28 T 11-10-2018 AL543_06075 df57641e1e0f7a590adfb1b4638aa2db 381 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 3 376 3.9E-143 T 11-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 AL543_06075 df57641e1e0f7a590adfb1b4638aa2db 381 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 4 378 43.221 T 11-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 AL543_06075 df57641e1e0f7a590adfb1b4638aa2db 381 Pfam PF02684 Lipid-A-disaccharide synthetase 7 373 1.9E-131 T 11-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 AL543_05860 a8c87d04264751ef07fe5c90e0b2d3ca 299 SUPERFAMILY SSF55136 157 298 2.96E-23 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily AL543_05860 a8c87d04264751ef07fe5c90e0b2d3ca 299 Pfam PF06445 GyrI-like small molecule binding domain 153 287 1.2E-19 T 11-10-2018 IPR029442 GyrI-like small molecule binding domain AL543_05860 a8c87d04264751ef07fe5c90e0b2d3ca 299 SUPERFAMILY SSF46689 60 107 1.12E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_05860 a8c87d04264751ef07fe5c90e0b2d3ca 299 Gene3D G3DSA:3.20.80.10 151 299 6.3E-29 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily AL543_05860 a8c87d04264751ef07fe5c90e0b2d3ca 299 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 60 102 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL543_05860 a8c87d04264751ef07fe5c90e0b2d3ca 299 Pfam PF12833 Helix-turn-helix domain 30 107 1.8E-19 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL543_05860 a8c87d04264751ef07fe5c90e0b2d3ca 299 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 75 90 2.8E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL543_05860 a8c87d04264751ef07fe5c90e0b2d3ca 299 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 90 106 2.8E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL543_05860 a8c87d04264751ef07fe5c90e0b2d3ca 299 Gene3D G3DSA:1.10.10.60 1 56 3.1E-16 T 11-10-2018 AL543_05860 a8c87d04264751ef07fe5c90e0b2d3ca 299 SUPERFAMILY SSF46689 6 57 4.03E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_05860 a8c87d04264751ef07fe5c90e0b2d3ca 299 SMART SM00871 150 299 3.5E-17 T 11-10-2018 IPR010499 Bacterial transcription activator, effector binding AL543_05860 a8c87d04264751ef07fe5c90e0b2d3ca 299 SMART SM00342 23 106 2.8E-27 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL543_05860 a8c87d04264751ef07fe5c90e0b2d3ca 299 Gene3D G3DSA:1.10.10.60 57 112 2.3E-12 T 11-10-2018 AL543_19230 130e67497d2f7cf0735e077496d6569d 666 SUPERFAMILY SSF51395 2 361 1.69E-108 T 11-10-2018 AL543_19230 130e67497d2f7cf0735e077496d6569d 666 Gene3D G3DSA:3.40.50.720 373 660 4.8E-110 T 11-10-2018 AL543_19230 130e67497d2f7cf0735e077496d6569d 666 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 375 394 4.9E-9 T 11-10-2018 AL543_19230 130e67497d2f7cf0735e077496d6569d 666 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 496 514 4.9E-9 T 11-10-2018 AL543_19230 130e67497d2f7cf0735e077496d6569d 666 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 373 626 2.1E-25 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL543_19230 130e67497d2f7cf0735e077496d6569d 666 Gene3D G3DSA:3.20.20.70 1 367 2.5E-122 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_19230 130e67497d2f7cf0735e077496d6569d 666 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 327 8.3E-85 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AL543_19230 130e67497d2f7cf0735e077496d6569d 666 Gene3D G3DSA:3.50.50.60 467 619 4.8E-110 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_19230 130e67497d2f7cf0735e077496d6569d 666 SUPERFAMILY SSF51905 371 600 4.4E-39 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_14430 5b27dd4a216a6dfe014b07e27ae8e5ba 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 5.1E-12 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL543_14430 5b27dd4a216a6dfe014b07e27ae8e5ba 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 5.1E-12 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL543_14430 5b27dd4a216a6dfe014b07e27ae8e5ba 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 5.1E-12 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL543_14430 5b27dd4a216a6dfe014b07e27ae8e5ba 152 Gene3D G3DSA:1.10.10.10 4 55 4.3E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_14430 5b27dd4a216a6dfe014b07e27ae8e5ba 152 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 2.0E-17 T 11-10-2018 AL543_14430 5b27dd4a216a6dfe014b07e27ae8e5ba 152 SUPERFAMILY SSF46785 2 61 9.35E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_14430 5b27dd4a216a6dfe014b07e27ae8e5ba 152 SMART SM00344 3 112 4.3E-45 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AL543_14430 5b27dd4a216a6dfe014b07e27ae8e5ba 152 SUPERFAMILY SSF54909 63 152 2.15E-21 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AL543_14430 5b27dd4a216a6dfe014b07e27ae8e5ba 152 Gene3D G3DSA:3.30.70.920 56 140 1.8E-23 T 11-10-2018 AL543_14430 5b27dd4a216a6dfe014b07e27ae8e5ba 152 Pfam PF01037 Lrp/AsnC ligand binding domain 69 142 4.1E-22 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AL543_14430 5b27dd4a216a6dfe014b07e27ae8e5ba 152 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 11-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AL543_14225 eed18c21a8969f60213cf23a025ca1f1 456 Pfam PF00072 Response regulator receiver domain 2 108 4.8E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_14225 eed18c21a8969f60213cf23a025ca1f1 456 SMART SM00448 1 108 1.2E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_14225 eed18c21a8969f60213cf23a025ca1f1 456 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 218 233 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL543_14225 eed18c21a8969f60213cf23a025ca1f1 456 Gene3D G3DSA:3.40.50.2300 1 117 3.8E-31 T 11-10-2018 AL543_14225 eed18c21a8969f60213cf23a025ca1f1 456 SUPERFAMILY SSF52172 2 176 5.27E-40 T 11-10-2018 IPR011006 CheY-like superfamily AL543_14225 eed18c21a8969f60213cf23a025ca1f1 456 Gene3D G3DSA:1.10.10.60 399 443 7.5E-10 T 11-10-2018 AL543_14225 eed18c21a8969f60213cf23a025ca1f1 456 Pfam PF02954 Bacterial regulatory protein, Fis family 405 445 4.0E-13 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL543_14225 eed18c21a8969f60213cf23a025ca1f1 456 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 345 354 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AL543_14225 eed18c21a8969f60213cf23a025ca1f1 456 SUPERFAMILY SSF46689 345 444 1.16E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_14225 eed18c21a8969f60213cf23a025ca1f1 456 Pfam PF00158 Sigma-54 interaction domain 133 298 6.6E-69 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL543_14225 eed18c21a8969f60213cf23a025ca1f1 456 SMART SM00382 152 295 2.0E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_14225 eed18c21a8969f60213cf23a025ca1f1 456 SUPERFAMILY SSF52540 132 374 1.21E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_14225 eed18c21a8969f60213cf23a025ca1f1 456 Gene3D G3DSA:3.40.50.300 118 303 6.7E-65 T 11-10-2018 AL543_14225 eed18c21a8969f60213cf23a025ca1f1 456 Gene3D G3DSA:1.10.8.60 304 382 1.2E-21 T 11-10-2018 AL543_18300 fc863d223067f4af5a08eaf35ac00783 450 SUPERFAMILY SSF69304 176 448 1.83E-57 T 11-10-2018 AL543_18300 fc863d223067f4af5a08eaf35ac00783 450 Gene3D G3DSA:3.40.50.10070 23 183 1.7E-48 T 11-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 AL543_18300 fc863d223067f4af5a08eaf35ac00783 450 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 16 447 5.2E-171 T 11-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 AL543_18300 fc863d223067f4af5a08eaf35ac00783 450 Pfam PF04052 TolB amino-terminal domain 24 126 9.8E-34 T 11-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 AL543_18300 fc863d223067f4af5a08eaf35ac00783 450 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 5 446 51.186 T 11-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 AL543_18300 fc863d223067f4af5a08eaf35ac00783 450 SUPERFAMILY SSF52964 29 181 1.05E-40 T 11-10-2018 AL543_18300 fc863d223067f4af5a08eaf35ac00783 450 Gene3D G3DSA:2.120.10.30 185 450 2.8E-98 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AL543_18300 fc863d223067f4af5a08eaf35ac00783 450 Pfam PF07676 WD40-like Beta Propeller Repeat 222 248 2.3E-8 T 11-10-2018 IPR011659 WD40-like Beta Propeller AL543_18300 fc863d223067f4af5a08eaf35ac00783 450 Pfam PF07676 WD40-like Beta Propeller Repeat 258 292 1.1E-7 T 11-10-2018 IPR011659 WD40-like Beta Propeller AL543_18300 fc863d223067f4af5a08eaf35ac00783 450 Pfam PF07676 WD40-like Beta Propeller Repeat 300 336 3.2E-14 T 11-10-2018 IPR011659 WD40-like Beta Propeller AL543_01360 cb8e56f3f98b04f644ff4d9b25182aad 921 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 872 888 2.9E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_01360 cb8e56f3f98b04f644ff4d9b25182aad 921 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 888 900 2.9E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_01360 cb8e56f3f98b04f644ff4d9b25182aad 921 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 858 872 2.9E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_01360 cb8e56f3f98b04f644ff4d9b25182aad 921 SUPERFAMILY SSF46894 850 914 6.46E-17 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL543_01360 cb8e56f3f98b04f644ff4d9b25182aad 921 SUPERFAMILY SSF52540 31 247 7.91E-10 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_01360 cb8e56f3f98b04f644ff4d9b25182aad 921 Hamap MF_01247 HTH-type transcriptional regulator MalT [malT]. 20 921 36.768 T 11-10-2018 IPR023768 Transcriptional regulator HTH-type, MalT AL543_01360 cb8e56f3f98b04f644ff4d9b25182aad 921 Gene3D G3DSA:1.25.40.10 459 826 2.6E-81 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_01360 cb8e56f3f98b04f644ff4d9b25182aad 921 Gene3D G3DSA:3.40.50.300 25 186 3.2E-6 T 11-10-2018 AL543_01360 cb8e56f3f98b04f644ff4d9b25182aad 921 Pfam PF00196 Bacterial regulatory proteins, luxR family 857 912 1.6E-19 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_01360 cb8e56f3f98b04f644ff4d9b25182aad 921 SUPERFAMILY SSF48452 462 824 1.9E-159 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_01360 cb8e56f3f98b04f644ff4d9b25182aad 921 Gene3D G3DSA:1.10.10.10 827 917 3.3E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_01360 cb8e56f3f98b04f644ff4d9b25182aad 921 ProSitePatterns PS00622 LuxR-type HTH domain signature. 872 899 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_01360 cb8e56f3f98b04f644ff4d9b25182aad 921 SMART SM00421 855 912 7.2E-19 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_18420 58c2edc6a76e0ccf1931f3a6b274241d 706 SUPERFAMILY SSF58104 396 705 5.75E-70 T 11-10-2018 AL543_18420 58c2edc6a76e0ccf1931f3a6b274241d 706 Gene3D G3DSA:1.10.287.950 374 706 2.8E-67 T 11-10-2018 AL543_18420 58c2edc6a76e0ccf1931f3a6b274241d 706 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 489 671 3.8E-40 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_18420 58c2edc6a76e0ccf1931f3a6b274241d 706 SMART SM00283 443 704 3.5E-62 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_18420 58c2edc6a76e0ccf1931f3a6b274241d 706 Gene3D G3DSA:3.30.450.20 100 233 3.7E-21 T 11-10-2018 AL543_18420 58c2edc6a76e0ccf1931f3a6b274241d 706 Pfam PF00672 HAMP domain 375 424 1.2E-11 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_18420 58c2edc6a76e0ccf1931f3a6b274241d 706 Gene3D G3DSA:3.30.450.20 234 333 3.7E-21 T 11-10-2018 AL543_18420 58c2edc6a76e0ccf1931f3a6b274241d 706 SMART SM00304 374 428 3.6E-14 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_10905 ea3ab3d59116ac343651547bf9509594 156 Gene3D G3DSA:1.10.455.10 2 155 9.6E-65 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily AL543_10905 ea3ab3d59116ac343651547bf9509594 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.981 T 11-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 AL543_10905 ea3ab3d59116ac343651547bf9509594 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 1.6E-71 T 11-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 AL543_10905 ea3ab3d59116ac343651547bf9509594 156 PIRSF PIRSF002122 3 156 1.2E-63 T 11-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 AL543_10905 ea3ab3d59116ac343651547bf9509594 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 11-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_10905 ea3ab3d59116ac343651547bf9509594 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 4.2E-66 T 11-10-2018 IPR023798 Ribosomal protein S7 domain AL543_10905 ea3ab3d59116ac343651547bf9509594 156 SUPERFAMILY SSF47973 6 149 1.7E-60 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily AL543_10040 167c112acf38640525c0050e90b74c9e 279 SUPERFAMILY SSF53335 9 275 3.33E-98 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL543_10040 167c112acf38640525c0050e90b74c9e 279 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 277 5.3E-121 T 11-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 AL543_10040 167c112acf38640525c0050e90b74c9e 279 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 41.96 T 11-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 AL543_10040 167c112acf38640525c0050e90b74c9e 279 Gene3D G3DSA:3.40.50.150 1 279 7.5E-118 T 11-10-2018 AL543_03495 dfab834fca60fb03688ed9ba62bd6bac 179 SUPERFAMILY SSF48317 7 150 2.75E-24 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AL543_03495 dfab834fca60fb03688ed9ba62bd6bac 179 Pfam PF01569 PAP2 superfamily 81 150 8.2E-11 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL543_03495 dfab834fca60fb03688ed9ba62bd6bac 179 SMART SM00014 52 151 2.9E-8 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL543_03495 dfab834fca60fb03688ed9ba62bd6bac 179 Gene3D G3DSA:1.20.144.10 54 157 6.5E-15 T 11-10-2018 AL543_07235 e175eaad485b7458b144cf74faebb98e 601 Gene3D G3DSA:3.40.50.12780 1 313 1.0E-56 T 11-10-2018 AL543_07235 e175eaad485b7458b144cf74faebb98e 601 ProSitePatterns PS00455 Putative AMP-binding domain signature. 183 194 - T 11-10-2018 IPR020845 AMP-binding, conserved site AL543_07235 e175eaad485b7458b144cf74faebb98e 601 Pfam PF00501 AMP-binding enzyme 14 466 4.6E-100 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AL543_07235 e175eaad485b7458b144cf74faebb98e 601 Gene3D G3DSA:3.40.50.12780 314 459 1.6E-32 T 11-10-2018 AL543_07235 e175eaad485b7458b144cf74faebb98e 601 SUPERFAMILY SSF56801 7 597 7.06E-117 T 11-10-2018 AL543_16700 8cd98b31d9d6312e9f61586c47de9d72 57 Pfam PF04957 Ribosome modulation factor 1 54 1.6E-28 T 11-10-2018 IPR007040 Ribosome modulation factor AL543_16700 8cd98b31d9d6312e9f61586c47de9d72 57 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 52 3.0E-24 T 11-10-2018 IPR007040 Ribosome modulation factor AL543_16700 8cd98b31d9d6312e9f61586c47de9d72 57 Gene3D G3DSA:1.10.10.620 1 57 2.1E-29 T 11-10-2018 IPR023200 Ribosome modulation factor domain superfamily AL543_16700 8cd98b31d9d6312e9f61586c47de9d72 57 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 55 30.355 T 11-10-2018 IPR007040 Ribosome modulation factor AL543_13580 5648f2e45429f27f2e8a1c45996e30ca 254 Pfam PF01618 MotA/TolQ/ExbB proton channel family 99 213 2.0E-21 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AL543_13580 5648f2e45429f27f2e8a1c45996e30ca 254 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 182 199 - T 11-10-2018 IPR000540 Flagellar motor protein MotA, conserved site AL543_01935 bdda34b2ef10371d1178bb8b60eb6f18 452 Gene3D G3DSA:1.10.10.60 93 191 6.2E-24 T 11-10-2018 AL543_01935 bdda34b2ef10371d1178bb8b60eb6f18 452 SUPERFAMILY SSF46689 141 190 5.82E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_01935 bdda34b2ef10371d1178bb8b60eb6f18 452 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 140 182 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL543_01935 bdda34b2ef10371d1178bb8b60eb6f18 452 SUPERFAMILY SSF46689 92 136 7.62E-5 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_01935 bdda34b2ef10371d1178bb8b60eb6f18 452 Pfam PF06029 AlkA N-terminal domain 198 309 2.4E-37 T 11-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal AL543_01935 bdda34b2ef10371d1178bb8b60eb6f18 452 SMART SM00342 103 186 2.5E-23 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL543_01935 bdda34b2ef10371d1178bb8b60eb6f18 452 SUPERFAMILY SSF48150 300 450 3.84E-25 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AL543_01935 bdda34b2ef10371d1178bb8b60eb6f18 452 Pfam PF02805 Metal binding domain of Ada 13 75 2.9E-30 T 11-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 AL543_01935 bdda34b2ef10371d1178bb8b60eb6f18 452 SUPERFAMILY SSF55945 198 291 2.98E-29 T 11-10-2018 AL543_01935 bdda34b2ef10371d1178bb8b60eb6f18 452 Pfam PF12833 Helix-turn-helix domain 109 187 1.8E-22 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL543_01935 bdda34b2ef10371d1178bb8b60eb6f18 452 SMART SM01009 197 309 1.5E-45 T 11-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal AL543_01935 bdda34b2ef10371d1178bb8b60eb6f18 452 Gene3D G3DSA:3.30.310.20 197 309 1.8E-29 T 11-10-2018 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily AL543_01935 bdda34b2ef10371d1178bb8b60eb6f18 452 Gene3D G3DSA:3.40.10.10 3 77 2.7E-30 T 11-10-2018 IPR035451 Ada-like domain superfamily AL543_01935 bdda34b2ef10371d1178bb8b60eb6f18 452 Gene3D G3DSA:1.10.340.30 310 410 5.2E-16 T 11-10-2018 AL543_01935 bdda34b2ef10371d1178bb8b60eb6f18 452 SUPERFAMILY SSF57884 4 90 4.58E-34 T 11-10-2018 IPR035451 Ada-like domain superfamily AL543_15445 99814414f463e7d68f6c2778a1a1af62 259 SUPERFAMILY SSF81301 68 224 2.45E-15 T 11-10-2018 AL543_15445 99814414f463e7d68f6c2778a1a1af62 259 Gene3D G3DSA:3.30.460.10 74 196 2.3E-6 T 11-10-2018 AL543_15445 99814414f463e7d68f6c2778a1a1af62 259 Pfam PF04607 Region found in RelA / SpoT proteins 107 206 2.1E-4 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 AL543_05970 6224892578b261056928415b32f9a56d 261 SUPERFAMILY SSF52172 7 171 1.57E-32 T 11-10-2018 IPR011006 CheY-like superfamily AL543_05970 6224892578b261056928415b32f9a56d 261 Pfam PF04397 LytTr DNA-binding domain 164 260 3.2E-23 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AL543_05970 6224892578b261056928415b32f9a56d 261 Gene3D G3DSA:2.40.50.40 155 226 7.0E-8 T 11-10-2018 AL543_05970 6224892578b261056928415b32f9a56d 261 SMART SM00448 6 118 3.6E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_05970 6224892578b261056928415b32f9a56d 261 SMART SM00850 163 261 4.8E-22 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AL543_05970 6224892578b261056928415b32f9a56d 261 Gene3D G3DSA:3.40.50.2300 1 137 1.7E-33 T 11-10-2018 AL543_05970 6224892578b261056928415b32f9a56d 261 Pfam PF00072 Response regulator receiver domain 9 115 3.9E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_17845 ffa2029c73c857e35b214172b4821ad1 919 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 62 85 - T 11-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 AL543_17845 ffa2029c73c857e35b214172b4821ad1 919 SUPERFAMILY SSF63411 500 716 1.22E-24 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL543_17845 ffa2029c73c857e35b214172b4821ad1 919 Gene3D G3DSA:3.30.830.10 8 251 1.0E-64 T 11-10-2018 AL543_17845 ffa2029c73c857e35b214172b4821ad1 919 Pfam PF00675 Insulinase (Peptidase family M16) 49 185 5.5E-28 T 11-10-2018 IPR011765 Peptidase M16, N-terminal AL543_17845 ffa2029c73c857e35b214172b4821ad1 919 SUPERFAMILY SSF63411 19 250 3.67E-47 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL543_17845 ffa2029c73c857e35b214172b4821ad1 919 Pfam PF05193 Peptidase M16 inactive domain 204 374 2.2E-17 T 11-10-2018 IPR007863 Peptidase M16, C-terminal AL543_17845 ffa2029c73c857e35b214172b4821ad1 919 Pfam PF05193 Peptidase M16 inactive domain 672 847 9.5E-10 T 11-10-2018 IPR007863 Peptidase M16, C-terminal AL543_17845 ffa2029c73c857e35b214172b4821ad1 919 SUPERFAMILY SSF63411 758 906 3.49E-15 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL543_17845 ffa2029c73c857e35b214172b4821ad1 919 Gene3D G3DSA:3.30.830.10 258 458 2.9E-9 T 11-10-2018 AL543_17845 ffa2029c73c857e35b214172b4821ad1 919 SUPERFAMILY SSF63411 295 460 1.55E-11 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL543_17845 ffa2029c73c857e35b214172b4821ad1 919 Gene3D G3DSA:3.30.830.10 744 918 4.7E-15 T 11-10-2018 AL543_17845 ffa2029c73c857e35b214172b4821ad1 919 Gene3D G3DSA:3.30.830.10 510 719 1.1E-16 T 11-10-2018 AL543_14915 ffc4fd0734d903bab2f8ae7cb6824c2d 413 PIRSF PIRSF003085 20 413 1.8E-123 T 11-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 AL543_14915 ffc4fd0734d903bab2f8ae7cb6824c2d 413 Pfam PF02353 Mycolic acid cyclopropane synthetase 138 406 4.6E-84 T 11-10-2018 AL543_14915 ffc4fd0734d903bab2f8ae7cb6824c2d 413 SUPERFAMILY SSF53335 41 366 1.51E-86 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL543_14915 ffc4fd0734d903bab2f8ae7cb6824c2d 413 Gene3D G3DSA:3.40.50.150 144 413 2.2E-103 T 11-10-2018 AL543_11410 066e6726473ffe088f354418a81bf230 272 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 264 55.412 T 11-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 AL543_11410 066e6726473ffe088f354418a81bf230 272 Gene3D G3DSA:1.10.8.100 200 266 4.3E-24 T 11-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 AL543_11410 066e6726473ffe088f354418a81bf230 272 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 11-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 AL543_11410 066e6726473ffe088f354418a81bf230 272 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 10 263 1.5E-86 T 11-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 AL543_11410 066e6726473ffe088f354418a81bf230 272 Gene3D G3DSA:3.40.50.150 1 198 2.5E-65 T 11-10-2018 AL543_11410 066e6726473ffe088f354418a81bf230 272 SMART SM00650 25 197 1.9E-89 T 11-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 AL543_11410 066e6726473ffe088f354418a81bf230 272 SUPERFAMILY SSF53335 8 265 4.05E-80 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL543_11410 066e6726473ffe088f354418a81bf230 272 Pfam PF00398 Ribosomal RNA adenine dimethylase 9 263 4.3E-77 T 11-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm AL543_01720 994a511cddd1141f1f4ba1cae614bcf5 105 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 2 99 4.3E-26 T 11-10-2018 IPR008407 Branched-chain amino acid transport, AzlD AL543_04685 c48b0234f06833a1c2621296e933a62f 1013 Gene3D G3DSA:3.40.50.300 731 1011 1.5E-24 T 11-10-2018 AL543_04685 c48b0234f06833a1c2621296e933a62f 1013 Pfam PF13476 AAA domain 5 253 3.5E-26 T 11-10-2018 IPR038729 Rad50/SbcC-type AAA domain AL543_04685 c48b0234f06833a1c2621296e933a62f 1013 Gene3D G3DSA:3.40.50.300 1 284 7.2E-44 T 11-10-2018 AL543_04685 c48b0234f06833a1c2621296e933a62f 1013 SUPERFAMILY SSF52540 5 991 6.73E-30 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_04685 c48b0234f06833a1c2621296e933a62f 1013 Pfam PF13558 Putative exonuclease SbcCD, C subunit 913 972 1.0E-11 T 11-10-2018 AL543_16845 ad99ce1cf64a5f93d12765ccec573921 951 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 62 112 1.7E-11 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL543_16845 ad99ce1cf64a5f93d12765ccec573921 951 Gene3D G3DSA:2.40.40.20 767 951 1.8E-47 T 11-10-2018 AL543_16845 ad99ce1cf64a5f93d12765ccec573921 951 Gene3D G3DSA:2.20.25.90 62 114 3.1E-12 T 11-10-2018 AL543_16845 ad99ce1cf64a5f93d12765ccec573921 951 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 66 83 - T 11-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 AL543_16845 ad99ce1cf64a5f93d12765ccec573921 951 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 19 47 1.1E-4 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AL543_16845 ad99ce1cf64a5f93d12765ccec573921 951 PIRSF PIRSF036643 25 579 1.9E-114 T 11-10-2018 AL543_16845 ad99ce1cf64a5f93d12765ccec573921 951 PIRSF PIRSF036643 783 950 3.2E-16 T 11-10-2018 AL543_16845 ad99ce1cf64a5f93d12765ccec573921 951 Gene3D G3DSA:3.40.228.10 195 394 6.1E-133 T 11-10-2018 AL543_16845 ad99ce1cf64a5f93d12765ccec573921 951 SUPERFAMILY SSF50692 752 951 7.05E-39 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily AL543_16845 ad99ce1cf64a5f93d12765ccec573921 951 Pfam PF01568 Molydopterin dinucleotide binding domain 818 944 1.2E-20 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 AL543_16845 ad99ce1cf64a5f93d12765ccec573921 951 Pfam PF00384 Molybdopterin oxidoreductase 118 568 1.9E-52 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL543_16845 ad99ce1cf64a5f93d12765ccec573921 951 SUPERFAMILY SSF53706 59 646 2.22E-200 T 11-10-2018 AL543_16845 ad99ce1cf64a5f93d12765ccec573921 951 Gene3D G3DSA:3.40.50.740 126 617 6.1E-133 T 11-10-2018 AL543_16845 ad99ce1cf64a5f93d12765ccec573921 951 SMART SM00926 61 115 3.9E-16 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL543_11260 41919626a5d98f9b9ed2521ee08baa08 553 Gene3D G3DSA:1.20.1270.20 153 235 1.4E-27 T 11-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 AL543_11260 41919626a5d98f9b9ed2521ee08baa08 553 Gene3D G3DSA:1.20.1270.20 1 142 6.6E-35 T 11-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 AL543_11260 41919626a5d98f9b9ed2521ee08baa08 553 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 552 20.198 T 11-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 AL543_11260 41919626a5d98f9b9ed2521ee08baa08 553 Gene3D G3DSA:3.40.50.2030 383 551 2.2E-59 T 11-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 AL543_11260 41919626a5d98f9b9ed2521ee08baa08 553 PIRSF PIRSF000076 1 553 8.6E-238 T 11-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 AL543_11260 41919626a5d98f9b9ed2521ee08baa08 553 Gene3D G3DSA:3.40.50.2030 237 382 8.6E-63 T 11-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 AL543_11260 41919626a5d98f9b9ed2521ee08baa08 553 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 551 1.3E-226 T 11-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 AL543_11260 41919626a5d98f9b9ed2521ee08baa08 553 SUPERFAMILY SSF56821 1 551 6.56E-190 T 11-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 AL543_11260 41919626a5d98f9b9ed2521ee08baa08 553 Pfam PF03063 Prismane/CO dehydrogenase family 1 547 1.5E-161 T 11-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 AL543_03515 8cf5101ac22a7e0906afe9f034f4649e 968 SUPERFAMILY SSF47226 864 965 4.06E-16 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AL543_03515 8cf5101ac22a7e0906afe9f034f4649e 968 SUPERFAMILY SSF52172 710 831 8.54E-31 T 11-10-2018 IPR011006 CheY-like superfamily AL543_03515 8cf5101ac22a7e0906afe9f034f4649e 968 TIGRFAM TIGR02956 TMAO_torS: TMAO reductase sytem sensor TorS 7 967 0.0 T 11-10-2018 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 AL543_03515 8cf5101ac22a7e0906afe9f034f4649e 968 Gene3D G3DSA:3.30.565.10 533 692 6.1E-49 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_03515 8cf5101ac22a7e0906afe9f034f4649e 968 SUPERFAMILY SSF55874 523 694 3.41E-46 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_03515 8cf5101ac22a7e0906afe9f034f4649e 968 SMART SM00448 709 825 2.9E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_03515 8cf5101ac22a7e0906afe9f034f4649e 968 SMART SM00387 581 692 3.7E-38 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_03515 8cf5101ac22a7e0906afe9f034f4649e 968 SMART SM00388 469 534 8.9E-24 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_03515 8cf5101ac22a7e0906afe9f034f4649e 968 Pfam PF01627 Hpt domain 906 945 2.9E-8 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AL543_03515 8cf5101ac22a7e0906afe9f034f4649e 968 Gene3D G3DSA:1.10.287.130 436 532 5.0E-27 T 11-10-2018 AL543_03515 8cf5101ac22a7e0906afe9f034f4649e 968 Gene3D G3DSA:1.20.120.160 855 968 5.6E-16 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AL543_03515 8cf5101ac22a7e0906afe9f034f4649e 968 Gene3D G3DSA:1.20.58.920 47 180 1.4E-45 T 11-10-2018 IPR038188 TorS, sensor domain superfamily AL543_03515 8cf5101ac22a7e0906afe9f034f4649e 968 Gene3D G3DSA:1.20.58.920 181 320 3.8E-50 T 11-10-2018 IPR038188 TorS, sensor domain superfamily AL543_03515 8cf5101ac22a7e0906afe9f034f4649e 968 PIRSF PIRSF036437 1 968 0.0 T 11-10-2018 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 AL543_03515 8cf5101ac22a7e0906afe9f034f4649e 968 Gene3D G3DSA:3.40.50.2300 703 832 5.3E-31 T 11-10-2018 AL543_03515 8cf5101ac22a7e0906afe9f034f4649e 968 PRINTS PR00344 Bacterial sensor protein C-terminal signature 619 633 1.1E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_03515 8cf5101ac22a7e0906afe9f034f4649e 968 PRINTS PR00344 Bacterial sensor protein C-terminal signature 676 689 1.1E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_03515 8cf5101ac22a7e0906afe9f034f4649e 968 PRINTS PR00344 Bacterial sensor protein C-terminal signature 637 647 1.1E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_03515 8cf5101ac22a7e0906afe9f034f4649e 968 PRINTS PR00344 Bacterial sensor protein C-terminal signature 652 670 1.1E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_03515 8cf5101ac22a7e0906afe9f034f4649e 968 SUPERFAMILY SSF47384 458 535 9.02E-20 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL543_03515 8cf5101ac22a7e0906afe9f034f4649e 968 Pfam PF00072 Response regulator receiver domain 711 825 1.5E-17 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_03515 8cf5101ac22a7e0906afe9f034f4649e 968 Gene3D G3DSA:1.20.1480.50 321 417 3.7E-5 T 11-10-2018 AL543_03515 8cf5101ac22a7e0906afe9f034f4649e 968 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 581 691 1.7E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_03515 8cf5101ac22a7e0906afe9f034f4649e 968 Pfam PF00512 His Kinase A (phospho-acceptor) domain 469 534 1.3E-19 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_19035 91ce245f112d37a96771138061101790 311 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 149 306 1.2E-67 T 11-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AL543_19035 91ce245f112d37a96771138061101790 311 SUPERFAMILY SSF53223 26 147 2.21E-39 T 11-10-2018 AL543_19035 91ce245f112d37a96771138061101790 311 Gene3D G3DSA:3.40.50.720 31 284 4.5E-107 T 11-10-2018 AL543_19035 91ce245f112d37a96771138061101790 311 SUPERFAMILY SSF51735 148 305 1.13E-50 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_19035 91ce245f112d37a96771138061101790 311 Gene3D G3DSA:3.40.50.10860 33 301 4.5E-107 T 11-10-2018 AL543_19035 91ce245f112d37a96771138061101790 311 Hamap MF_01576 Bifunctional protein FolD [folD]. 28 308 37.575 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AL543_19035 91ce245f112d37a96771138061101790 311 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 285 293 - T 11-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AL543_19035 91ce245f112d37a96771138061101790 311 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 264 280 2.8E-87 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AL543_19035 91ce245f112d37a96771138061101790 311 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 59 81 2.8E-87 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AL543_19035 91ce245f112d37a96771138061101790 311 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 100 127 2.8E-87 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AL543_19035 91ce245f112d37a96771138061101790 311 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 180 200 2.8E-87 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AL543_19035 91ce245f112d37a96771138061101790 311 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 229 258 2.8E-87 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AL543_19035 91ce245f112d37a96771138061101790 311 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 281 299 2.8E-87 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AL543_19035 91ce245f112d37a96771138061101790 311 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 135 156 2.8E-87 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AL543_19035 91ce245f112d37a96771138061101790 311 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 31 146 3.0E-38 T 11-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AL543_18860 c0d0e9a2842fc5e75eecb4ddd853bb1b 225 Gene3D G3DSA:3.40.50.300 1 225 3.9E-83 T 11-10-2018 AL543_18860 c0d0e9a2842fc5e75eecb4ddd853bb1b 225 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 34.607 T 11-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 AL543_18860 c0d0e9a2842fc5e75eecb4ddd853bb1b 225 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 1.4E-85 T 11-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 AL543_18860 c0d0e9a2842fc5e75eecb4ddd853bb1b 225 SUPERFAMILY SSF52540 6 223 3.55E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_18860 c0d0e9a2842fc5e75eecb4ddd853bb1b 225 Pfam PF02224 Cytidylate kinase 8 221 3.4E-78 T 11-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 AL543_14630 442dd1c4253c8c2bd1f2b480b4011d77 157 SUPERFAMILY SSF52728 3 156 4.32E-52 T 11-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 AL543_14630 442dd1c4253c8c2bd1f2b480b4011d77 157 Pfam PF03830 PTS system sorbose subfamily IIB component 4 149 1.1E-51 T 11-10-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 AL543_14630 442dd1c4253c8c2bd1f2b480b4011d77 157 Gene3D G3DSA:3.40.35.10 1 155 2.4E-56 T 11-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 AL543_14630 442dd1c4253c8c2bd1f2b480b4011d77 157 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 3 151 6.0E-68 T 11-10-2018 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 AL543_01500 55e282ea77e11ff81424ae584b3a7bc4 95 SUPERFAMILY SSF55729 4 90 8.65E-25 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL543_01500 55e282ea77e11ff81424ae584b3a7bc4 95 Pfam PF14542 GCN5-related N-acetyl-transferase 15 90 2.6E-23 T 11-10-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase AL543_01500 55e282ea77e11ff81424ae584b3a7bc4 95 Gene3D G3DSA:3.40.630.30 3 94 1.2E-22 T 11-10-2018 AL543_19150 26842ce29e10b38a2b9dc17000d888c0 435 Hamap MF_01935 Isochorismate synthase MenF [menF]. 3 427 31.392 T 11-10-2018 IPR034681 Isochorismate synthase MenF GO:0008909|GO:0009234 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 AL543_19150 26842ce29e10b38a2b9dc17000d888c0 435 Gene3D G3DSA:3.60.120.10 3 429 8.3E-126 T 11-10-2018 IPR005801 ADC synthase GO:0009058 AL543_19150 26842ce29e10b38a2b9dc17000d888c0 435 Pfam PF00425 chorismate binding enzyme 165 417 5.1E-69 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AL543_19150 26842ce29e10b38a2b9dc17000d888c0 435 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 85 424 7.6E-104 T 11-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 AL543_19150 26842ce29e10b38a2b9dc17000d888c0 435 SUPERFAMILY SSF56322 29 425 9.03E-97 T 11-10-2018 IPR005801 ADC synthase GO:0009058 AL543_03040 a6578c8f30f930cedc2b75e13168acfa 278 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 15 272 6.8E-66 T 11-10-2018 IPR011862 Phosphate binding protein GO:0042301 AL543_03040 a6578c8f30f930cedc2b75e13168acfa 278 SUPERFAMILY SSF53850 19 272 2.54E-64 T 11-10-2018 AL543_03040 a6578c8f30f930cedc2b75e13168acfa 278 Pfam PF12849 PBP superfamily domain 21 260 1.2E-38 T 11-10-2018 IPR024370 PBP domain AL543_03040 a6578c8f30f930cedc2b75e13168acfa 278 Gene3D G3DSA:3.40.190.10 101 235 6.8E-84 T 11-10-2018 AL543_03040 a6578c8f30f930cedc2b75e13168acfa 278 Gene3D G3DSA:3.40.190.10 30 272 6.8E-84 T 11-10-2018 AL543_17830 a588f0b21f861b0c5628a31261c81f93 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 9.4E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_17830 a588f0b21f861b0c5628a31261c81f93 305 SUPERFAMILY SSF53850 89 296 1.99E-38 T 11-10-2018 AL543_17830 a588f0b21f861b0c5628a31261c81f93 305 Pfam PF03466 LysR substrate binding domain 89 293 9.0E-41 T 11-10-2018 IPR005119 LysR, substrate-binding AL543_17830 a588f0b21f861b0c5628a31261c81f93 305 SUPERFAMILY SSF46785 1 112 4.19E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_17830 a588f0b21f861b0c5628a31261c81f93 305 Gene3D G3DSA:3.40.190.10 163 267 4.2E-72 T 11-10-2018 AL543_17830 a588f0b21f861b0c5628a31261c81f93 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.3E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_17830 a588f0b21f861b0c5628a31261c81f93 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.3E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_17830 a588f0b21f861b0c5628a31261c81f93 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.3E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_17830 a588f0b21f861b0c5628a31261c81f93 305 Gene3D G3DSA:1.10.10.10 1 92 2.3E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_17830 a588f0b21f861b0c5628a31261c81f93 305 Gene3D G3DSA:3.40.190.10 93 290 4.2E-72 T 11-10-2018 AL543_01780 5c677069d3ae1f9fb8ba10488b918826 321 Pfam PF00294 pfkB family carbohydrate kinase 1 310 2.1E-60 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB AL543_01780 5c677069d3ae1f9fb8ba10488b918826 321 SUPERFAMILY SSF53613 1 310 5.3E-68 T 11-10-2018 IPR029056 Ribokinase-like AL543_01780 5c677069d3ae1f9fb8ba10488b918826 321 Gene3D G3DSA:3.40.1190.20 1 317 7.3E-76 T 11-10-2018 IPR029056 Ribokinase-like AL543_01780 5c677069d3ae1f9fb8ba10488b918826 321 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 265 278 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AL543_13060 ef8ae0f060ca6cc6aac69960b270c276 395 Gene3D G3DSA:3.30.160.390 1 98 3.9E-27 T 11-10-2018 IPR038488 Integrase, DNA-binding domain superfamily AL543_13060 ef8ae0f060ca6cc6aac69960b270c276 395 Pfam PF00589 Phage integrase family 203 374 9.2E-24 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL543_13060 ef8ae0f060ca6cc6aac69960b270c276 395 Pfam PF13356 Arm DNA-binding domain 2 88 1.1E-17 T 11-10-2018 IPR025166 Integrase, DNA-binding domain AL543_13060 ef8ae0f060ca6cc6aac69960b270c276 395 SUPERFAMILY SSF56349 98 383 2.0E-61 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL543_13060 ef8ae0f060ca6cc6aac69960b270c276 395 Gene3D G3DSA:1.10.443.10 200 386 2.2E-21 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AL543_13060 ef8ae0f060ca6cc6aac69960b270c276 395 Gene3D G3DSA:1.10.150.130 99 198 5.1E-16 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AL543_06175 33e0c440224c2913b8d2ec68861a26fb 156 Gene3D G3DSA:3.40.50.960 1 156 4.1E-64 T 11-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL543_06175 33e0c440224c2913b8d2ec68861a26fb 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 6.5E-55 T 11-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL543_06175 33e0c440224c2913b8d2ec68861a26fb 156 SUPERFAMILY SSF52121 4 154 1.27E-60 T 11-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL543_06175 33e0c440224c2913b8d2ec68861a26fb 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 2.4E-57 T 11-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL543_06175 33e0c440224c2913b8d2ec68861a26fb 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.34 T 11-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL543_10565 513f0ac01ba1dc70c88c9e37856c1a3f 613 Gene3D G3DSA:1.20.5.570 582 613 1.9E-14 T 11-10-2018 AL543_10565 513f0ac01ba1dc70c88c9e37856c1a3f 613 Gene3D G3DSA:3.40.1670.10 337 454 2.3E-43 T 11-10-2018 AL543_10565 513f0ac01ba1dc70c88c9e37856c1a3f 613 Gene3D G3DSA:3.40.1670.10 489 581 2.9E-8 T 11-10-2018 AL543_10565 513f0ac01ba1dc70c88c9e37856c1a3f 613 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 485 567 3.1E-17 T 11-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 AL543_10565 513f0ac01ba1dc70c88c9e37856c1a3f 613 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 11 431 3.7E-162 T 11-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 AL543_10565 513f0ac01ba1dc70c88c9e37856c1a3f 613 SUPERFAMILY SSF50475 3 322 4.32E-123 T 11-10-2018 AL543_10565 513f0ac01ba1dc70c88c9e37856c1a3f 613 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 455 3.9E-165 T 11-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 AL543_10565 513f0ac01ba1dc70c88c9e37856c1a3f 613 SUPERFAMILY SSF143968 323 460 2.09E-50 T 11-10-2018 AL543_10565 513f0ac01ba1dc70c88c9e37856c1a3f 613 SUPERFAMILY SSF143968 486 611 4.58E-30 T 11-10-2018 AL543_12135 b3ac911993c6bea15da49122b5f9c857 123 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 120 3.3E-42 T 11-10-2018 IPR008249 Uncharacterised protein family UPF0231 AL543_12135 b3ac911993c6bea15da49122b5f9c857 123 Hamap MF_01053 UPF0231 protein YacL [yacL]. 1 122 30.96 T 11-10-2018 IPR008249 Uncharacterised protein family UPF0231 AL543_12135 b3ac911993c6bea15da49122b5f9c857 123 PIRSF PIRSF006287 1 123 6.2E-49 T 11-10-2018 IPR008249 Uncharacterised protein family UPF0231 AL543_12135 b3ac911993c6bea15da49122b5f9c857 123 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 120 5.0E-55 T 11-10-2018 IPR008249 Uncharacterised protein family UPF0231 AL543_06300 33c482093de4a8b857b6324e3c2e974a 257 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 6 254 36.48 T 11-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 AL543_06300 33c482093de4a8b857b6324e3c2e974a 257 SMART SM00900 144 242 9.8E-33 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AL543_06300 33c482093de4a8b857b6324e3c2e974a 257 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 5 250 1.4E-95 T 11-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 AL543_06300 33c482093de4a8b857b6324e3c2e974a 257 PIRSF PIRSF009437 1 257 4.1E-109 T 11-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 AL543_06300 33c482093de4a8b857b6324e3c2e974a 257 Pfam PF04205 FMN-binding domain 144 239 5.6E-15 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AL543_04065 1275e959433352d7e8ee65e619e2db83 582 Gene3D G3DSA:3.40.50.300 4 454 9.1E-192 T 11-10-2018 AL543_04065 1275e959433352d7e8ee65e619e2db83 582 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 1 582 42.527 T 11-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 AL543_04065 1275e959433352d7e8ee65e619e2db83 582 Pfam PF01268 Formate--tetrahydrofolate ligase 4 581 5.7E-240 T 11-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 AL543_04065 1275e959433352d7e8ee65e619e2db83 582 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 103 113 - T 11-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 AL543_04065 1275e959433352d7e8ee65e619e2db83 582 Gene3D G3DSA:3.10.410.10 469 558 3.7E-31 T 11-10-2018 AL543_04065 1275e959433352d7e8ee65e619e2db83 582 Gene3D G3DSA:3.30.1510.10 129 264 9.1E-192 T 11-10-2018 AL543_04065 1275e959433352d7e8ee65e619e2db83 582 SUPERFAMILY SSF52540 4 580 1.65E-216 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_04065 1275e959433352d7e8ee65e619e2db83 582 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 345 356 - T 11-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 AL543_11485 5bd4b2f2e88823d3ddfb39e9f634d634 375 Pfam PF11873 Domain of unknown function (DUF3393) 4 206 9.2E-79 T 11-10-2018 IPR024570 Murein transglycosylase-C, N-terminal AL543_11485 5bd4b2f2e88823d3ddfb39e9f634d634 375 Pfam PF01464 Transglycosylase SLT domain 211 333 9.1E-29 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 AL543_11485 5bd4b2f2e88823d3ddfb39e9f634d634 375 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 228 256 - T 11-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AL543_11485 5bd4b2f2e88823d3ddfb39e9f634d634 375 Gene3D G3DSA:1.10.530.10 194 370 2.5E-49 T 11-10-2018 AL543_11485 5bd4b2f2e88823d3ddfb39e9f634d634 375 SUPERFAMILY SSF53955 206 370 6.76E-36 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AL543_15815 87bc3ba029be5c99aa1a0fafe431b117 396 Gene3D G3DSA:3.90.1150.10 11 389 1.5E-155 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL543_15815 87bc3ba029be5c99aa1a0fafe431b117 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 AL543_15815 87bc3ba029be5c99aa1a0fafe431b117 396 Pfam PF00155 Aminotransferase class I and II 26 391 1.1E-77 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL543_15815 87bc3ba029be5c99aa1a0fafe431b117 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 9.4E-39 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AL543_15815 87bc3ba029be5c99aa1a0fafe431b117 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 9.4E-39 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AL543_15815 87bc3ba029be5c99aa1a0fafe431b117 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 9.4E-39 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AL543_15815 87bc3ba029be5c99aa1a0fafe431b117 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 9.4E-39 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AL543_15815 87bc3ba029be5c99aa1a0fafe431b117 396 SUPERFAMILY SSF53383 1 391 1.16E-108 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL543_15815 87bc3ba029be5c99aa1a0fafe431b117 396 Gene3D G3DSA:3.40.640.10 45 315 1.5E-155 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL543_09590 a4e71479ea6e326cca9ac692424ec01c 805 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 805 0.0 T 11-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL543_09590 a4e71479ea6e326cca9ac692424ec01c 805 Gene3D G3DSA:3.40.50.670 399 571 4.3E-75 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL543_09590 a4e71479ea6e326cca9ac692424ec01c 805 Gene3D G3DSA:3.30.230.10 221 393 5.0E-75 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL543_09590 a4e71479ea6e326cca9ac692424ec01c 805 Gene3D G3DSA:3.40.50.670 705 804 5.0E-27 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL543_09590 a4e71479ea6e326cca9ac692424ec01c 805 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 172 8.4E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_09590 a4e71479ea6e326cca9ac692424ec01c 805 PRINTS PR01159 DNA gyrase subunit B signature 195 208 2.3E-87 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL543_09590 a4e71479ea6e326cca9ac692424ec01c 805 PRINTS PR01159 DNA gyrase subunit B signature 313 329 2.3E-87 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL543_09590 a4e71479ea6e326cca9ac692424ec01c 805 PRINTS PR01159 DNA gyrase subunit B signature 758 770 2.3E-87 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL543_09590 a4e71479ea6e326cca9ac692424ec01c 805 PRINTS PR01159 DNA gyrase subunit B signature 5 15 2.3E-87 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL543_09590 a4e71479ea6e326cca9ac692424ec01c 805 PRINTS PR01159 DNA gyrase subunit B signature 180 195 2.3E-87 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL543_09590 a4e71479ea6e326cca9ac692424ec01c 805 PRINTS PR01159 DNA gyrase subunit B signature 220 242 2.3E-87 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL543_09590 a4e71479ea6e326cca9ac692424ec01c 805 PRINTS PR01159 DNA gyrase subunit B signature 243 261 2.3E-87 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL543_09590 a4e71479ea6e326cca9ac692424ec01c 805 PRINTS PR01159 DNA gyrase subunit B signature 471 480 2.3E-87 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL543_09590 a4e71479ea6e326cca9ac692424ec01c 805 PRINTS PR01159 DNA gyrase subunit B signature 361 375 2.3E-87 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL543_09590 a4e71479ea6e326cca9ac692424ec01c 805 PRINTS PR01159 DNA gyrase subunit B signature 375 395 2.3E-87 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL543_09590 a4e71479ea6e326cca9ac692424ec01c 805 PRINTS PR01159 DNA gyrase subunit B signature 774 790 2.3E-87 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL543_09590 a4e71479ea6e326cca9ac692424ec01c 805 Pfam PF00204 DNA gyrase B 221 391 2.3E-61 T 11-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL543_09590 a4e71479ea6e326cca9ac692424ec01c 805 PRINTS PR00418 DNA topoisomerase II family signature 269 282 3.6E-71 T 11-10-2018 AL543_09590 a4e71479ea6e326cca9ac692424ec01c 805 PRINTS PR00418 DNA topoisomerase II family signature 737 753 3.6E-71 T 11-10-2018 AL543_09590 a4e71479ea6e326cca9ac692424ec01c 805 PRINTS PR00418 DNA topoisomerase II family signature 70 83 3.6E-71 T 11-10-2018 AL543_09590 a4e71479ea6e326cca9ac692424ec01c 805 PRINTS PR00418 DNA topoisomerase II family signature 35 50 3.6E-71 T 11-10-2018 AL543_09590 a4e71479ea6e326cca9ac692424ec01c 805 PRINTS PR00418 DNA topoisomerase II family signature 113 127 3.6E-71 T 11-10-2018 AL543_09590 a4e71479ea6e326cca9ac692424ec01c 805 PRINTS PR00418 DNA topoisomerase II family signature 488 504 3.6E-71 T 11-10-2018 AL543_09590 a4e71479ea6e326cca9ac692424ec01c 805 PRINTS PR00418 DNA topoisomerase II family signature 506 523 3.6E-71 T 11-10-2018 AL543_09590 a4e71479ea6e326cca9ac692424ec01c 805 PRINTS PR00418 DNA topoisomerase II family signature 526 538 3.6E-71 T 11-10-2018 AL543_09590 a4e71479ea6e326cca9ac692424ec01c 805 PRINTS PR00418 DNA topoisomerase II family signature 421 435 3.6E-71 T 11-10-2018 AL543_09590 a4e71479ea6e326cca9ac692424ec01c 805 SUPERFAMILY SSF54211 221 393 3.41E-59 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL543_09590 a4e71479ea6e326cca9ac692424ec01c 805 SMART SM00433 35 798 2.1E-274 T 11-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL543_09590 a4e71479ea6e326cca9ac692424ec01c 805 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 733 794 7.2E-31 T 11-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL543_09590 a4e71479ea6e326cca9ac692424ec01c 805 Gene3D G3DSA:3.30.565.10 1 220 1.4E-94 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_09590 a4e71479ea6e326cca9ac692424ec01c 805 SUPERFAMILY SSF55874 4 213 1.7E-76 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_09590 a4e71479ea6e326cca9ac692424ec01c 805 Pfam PF01751 Toprim domain 420 532 1.1E-18 T 11-10-2018 IPR006171 TOPRIM domain AL543_09590 a4e71479ea6e326cca9ac692424ec01c 805 SUPERFAMILY SSF56719 395 796 5.75E-88 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AL543_09590 a4e71479ea6e326cca9ac692424ec01c 805 Gene3D G3DSA:3.10.20.690 593 684 1.1E-37 T 11-10-2018 AL543_09590 a4e71479ea6e326cca9ac692424ec01c 805 ProSitePatterns PS00177 DNA topoisomerase II signature. 423 431 - T 11-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL543_09590 a4e71479ea6e326cca9ac692424ec01c 805 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 805 108.921 T 11-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL543_09590 a4e71479ea6e326cca9ac692424ec01c 805 SMART SM00387 31 175 2.2E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_19475 394533ea68173f362c5b185afb2c84a8 333 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 332 46.561 T 11-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 AL543_19475 394533ea68173f362c5b185afb2c84a8 333 Pfam PF04245 37-kD nucleoid-associated bacterial protein 9 326 1.2E-98 T 11-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 AL543_14280 0835d837969b4750b3a63f979bc8fe25 773 Gene3D G3DSA:3.40.50.1000 445 711 7.8E-82 T 11-10-2018 IPR023214 HAD superfamily AL543_14280 0835d837969b4750b3a63f979bc8fe25 773 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 586 597 1.7E-27 T 11-10-2018 AL543_14280 0835d837969b4750b3a63f979bc8fe25 773 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 313 327 1.7E-27 T 11-10-2018 AL543_14280 0835d837969b4750b3a63f979bc8fe25 773 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 464 478 1.7E-27 T 11-10-2018 AL543_14280 0835d837969b4750b3a63f979bc8fe25 773 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 608 618 1.7E-27 T 11-10-2018 AL543_14280 0835d837969b4750b3a63f979bc8fe25 773 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 682 694 1.7E-27 T 11-10-2018 AL543_14280 0835d837969b4750b3a63f979bc8fe25 773 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 659 678 1.7E-27 T 11-10-2018 AL543_14280 0835d837969b4750b3a63f979bc8fe25 773 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 214 583 3.9E-96 T 11-10-2018 AL543_14280 0835d837969b4750b3a63f979bc8fe25 773 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 237 738 9.5E-78 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AL543_14280 0835d837969b4750b3a63f979bc8fe25 773 Gene3D G3DSA:2.70.150.20 264 368 1.1E-30 T 11-10-2018 AL543_14280 0835d837969b4750b3a63f979bc8fe25 773 PRINTS PR00941 Cadmium-transporting ATPase signature 329 345 2.3E-7 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AL543_14280 0835d837969b4750b3a63f979bc8fe25 773 PRINTS PR00941 Cadmium-transporting ATPase signature 90 111 2.3E-7 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AL543_14280 0835d837969b4750b3a63f979bc8fe25 773 PRINTS PR00941 Cadmium-transporting ATPase signature 249 269 2.3E-7 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AL543_14280 0835d837969b4750b3a63f979bc8fe25 773 PRINTS PR00941 Cadmium-transporting ATPase signature 348 362 2.3E-7 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AL543_14280 0835d837969b4750b3a63f979bc8fe25 773 SUPERFAMILY SSF81653 267 363 3.53E-21 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 AL543_14280 0835d837969b4750b3a63f979bc8fe25 773 Gene3D G3DSA:3.30.70.100 75 145 1.8E-14 T 11-10-2018 AL543_14280 0835d837969b4750b3a63f979bc8fe25 773 ProSitePatterns PS01229 Hypothetical cof family signature 2. 659 681 - T 11-10-2018 AL543_14280 0835d837969b4750b3a63f979bc8fe25 773 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 466 472 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AL543_14280 0835d837969b4750b3a63f979bc8fe25 773 SUPERFAMILY SSF56784 462 759 2.3E-50 T 11-10-2018 IPR036412 HAD-like superfamily AL543_14280 0835d837969b4750b3a63f979bc8fe25 773 SUPERFAMILY SSF81665 217 747 4.58E-21 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 AL543_14280 0835d837969b4750b3a63f979bc8fe25 773 Pfam PF00122 E1-E2 ATPase 265 444 2.9E-48 T 11-10-2018 AL543_14280 0835d837969b4750b3a63f979bc8fe25 773 Pfam PF00702 haloacid dehalogenase-like hydrolase 460 672 2.0E-39 T 11-10-2018 AL543_14280 0835d837969b4750b3a63f979bc8fe25 773 ProSitePatterns PS01047 Heavy-metal-associated domain. 81 110 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AL543_14280 0835d837969b4750b3a63f979bc8fe25 773 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 214 761 7.4E-174 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AL543_14280 0835d837969b4750b3a63f979bc8fe25 773 Pfam PF00403 Heavy-metal-associated domain 81 120 3.2E-9 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AL543_14280 0835d837969b4750b3a63f979bc8fe25 773 Gene3D G3DSA:3.40.1110.10 475 593 7.8E-82 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AL543_14280 0835d837969b4750b3a63f979bc8fe25 773 SUPERFAMILY SSF55008 75 140 1.14E-13 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 AL543_14380 f72832515d4f08259c573f505c7a7c9b 132 PIRSF PIRSF016789 6 127 2.2E-49 T 11-10-2018 IPR007401 Protein of unknown function DUF454 AL543_14380 f72832515d4f08259c573f505c7a7c9b 132 Pfam PF04304 Protein of unknown function (DUF454) 7 121 2.7E-39 T 11-10-2018 IPR007401 Protein of unknown function DUF454 AL543_18345 44ef971f24427b03d2603c06cc915403 334 SUPERFAMILY SSF46785 262 333 1.6E-25 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_18345 44ef971f24427b03d2603c06cc915403 334 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 28 331 5.6E-148 T 11-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 AL543_18345 44ef971f24427b03d2603c06cc915403 334 SMART SM00382 56 187 1.5E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_18345 44ef971f24427b03d2603c06cc915403 334 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 334 183.173 T 11-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 AL543_18345 44ef971f24427b03d2603c06cc915403 334 Gene3D G3DSA:1.10.8.60 187 260 5.5E-31 T 11-10-2018 AL543_18345 44ef971f24427b03d2603c06cc915403 334 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 255 332 9.0E-39 T 11-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 AL543_18345 44ef971f24427b03d2603c06cc915403 334 Gene3D G3DSA:1.10.10.10 262 334 4.1E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_18345 44ef971f24427b03d2603c06cc915403 334 SUPERFAMILY SSF52540 25 256 2.21E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_18345 44ef971f24427b03d2603c06cc915403 334 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 258 331 3.4E-33 T 11-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 AL543_18345 44ef971f24427b03d2603c06cc915403 334 Gene3D G3DSA:3.40.50.300 25 186 2.7E-41 T 11-10-2018 AL543_18345 44ef971f24427b03d2603c06cc915403 334 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 15 240 4.6E-118 T 11-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 AL543_00975 19a423d890f93b582c9197d27636e9b0 209 SUPERFAMILY SSF52833 7 206 7.13E-32 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL543_00975 19a423d890f93b582c9197d27636e9b0 209 Gene3D G3DSA:3.40.30.10 7 208 2.5E-34 T 11-10-2018 AL543_00975 19a423d890f93b582c9197d27636e9b0 209 Pfam PF13743 Thioredoxin 12 192 9.4E-16 T 11-10-2018 AL543_09095 abee0ff518fd9833f428ae9b8fa43ae2 303 SUPERFAMILY SSF103481 189 292 1.15E-11 T 11-10-2018 AL543_09095 abee0ff518fd9833f428ae9b8fa43ae2 303 SUPERFAMILY SSF103481 42 144 5.89E-13 T 11-10-2018 AL543_09095 abee0ff518fd9833f428ae9b8fa43ae2 303 Pfam PF00892 EamA-like transporter family 9 141 3.0E-18 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL543_09095 abee0ff518fd9833f428ae9b8fa43ae2 303 Pfam PF00892 EamA-like transporter family 155 286 9.5E-18 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL543_00310 c1367a01b9677c4239ddec64affbebe8 343 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 136 7.3E-31 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AL543_00310 c1367a01b9677c4239ddec64affbebe8 343 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 5 342 2.1E-180 T 11-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 AL543_00310 c1367a01b9677c4239ddec64affbebe8 343 SUPERFAMILY SSF50129 3 175 5.93E-53 T 11-10-2018 IPR011032 GroES-like superfamily AL543_00310 c1367a01b9677c4239ddec64affbebe8 343 Gene3D G3DSA:3.90.180.10 22 330 5.6E-118 T 11-10-2018 AL543_00310 c1367a01b9677c4239ddec64affbebe8 343 Pfam PF00107 Zinc-binding dehydrogenase 176 303 1.6E-27 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AL543_00310 c1367a01b9677c4239ddec64affbebe8 343 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 3 342 60.578 T 11-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 AL543_00310 c1367a01b9677c4239ddec64affbebe8 343 SUPERFAMILY SSF51735 143 307 3.13E-37 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_00310 c1367a01b9677c4239ddec64affbebe8 343 Gene3D G3DSA:3.40.50.720 155 288 5.6E-118 T 11-10-2018 AL543_00310 c1367a01b9677c4239ddec64affbebe8 343 SMART SM00829 14 340 1.7E-5 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AL543_00310 c1367a01b9677c4239ddec64affbebe8 343 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AL543_07015 55d64164563263d4c82c7d48fcdca5d0 202 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 23 201 1.1E-51 T 11-10-2018 IPR016476 SH3 domain protein AL543_07015 55d64164563263d4c82c7d48fcdca5d0 202 Pfam PF08239 Bacterial SH3 domain 31 81 1.7E-9 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type AL543_07015 55d64164563263d4c82c7d48fcdca5d0 202 SMART SM00287 19 85 6.5E-10 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type AL543_07015 55d64164563263d4c82c7d48fcdca5d0 202 Gene3D G3DSA:2.30.30.40 29 84 2.1E-9 T 11-10-2018 AL543_07015 55d64164563263d4c82c7d48fcdca5d0 202 PIRSF PIRSF006158 1 202 2.6E-68 T 11-10-2018 IPR016476 SH3 domain protein AL543_19325 08fdc2bd65776b4f8d84a30b51db6e97 196 Gene3D G3DSA:2.40.160.20 20 196 2.3E-12 T 11-10-2018 AL543_19325 08fdc2bd65776b4f8d84a30b51db6e97 196 Pfam PF01389 OmpA-like transmembrane domain 46 196 9.3E-6 T 11-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 AL543_19325 08fdc2bd65776b4f8d84a30b51db6e97 196 SUPERFAMILY SSF56925 22 196 2.88E-19 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AL543_02085 d8bfc901326476592fa58dbeec5c8ed4 145 Gene3D G3DSA:3.10.450.40 15 135 1.0E-8 T 11-10-2018 AL543_02085 d8bfc901326476592fa58dbeec5c8ed4 145 Pfam PF04965 Gene 25-like lysozyme 38 124 2.2E-16 T 11-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD AL543_02085 d8bfc901326476592fa58dbeec5c8ed4 145 SUPERFAMILY SSF160719 34 138 4.84E-20 T 11-10-2018 AL543_02085 d8bfc901326476592fa58dbeec5c8ed4 145 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 14 144 1.6E-39 T 11-10-2018 IPR017737 Type VI secretion system, lysozyme-related protein AL543_13080 be2c103f6196726fe2cd05b5c98d014d 73 SUPERFAMILY SSF46955 6 57 6.59E-8 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AL543_13080 be2c103f6196726fe2cd05b5c98d014d 73 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 6 54 6.4E-17 T 11-10-2018 IPR010260 DNA-binding transcriptional activator AlpA AL543_08075 4310e84ea475dad4e9b411a528da8161 333 Gene3D G3DSA:3.40.50.720 6 328 6.3E-120 T 11-10-2018 AL543_08075 4310e84ea475dad4e9b411a528da8161 333 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 145 2.9E-32 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AL543_08075 4310e84ea475dad4e9b411a528da8161 333 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 332 2.2E-119 T 11-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL543_08075 4310e84ea475dad4e9b411a528da8161 333 SMART SM00859 3 146 1.7E-46 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AL543_08075 4310e84ea475dad4e9b411a528da8161 333 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 333 37.911 T 11-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL543_08075 4310e84ea475dad4e9b411a528da8161 333 Gene3D G3DSA:3.30.360.10 153 311 6.3E-120 T 11-10-2018 AL543_08075 4310e84ea475dad4e9b411a528da8161 333 SUPERFAMILY SSF55347 154 307 3.01E-48 T 11-10-2018 AL543_08075 4310e84ea475dad4e9b411a528da8161 333 SUPERFAMILY SSF51735 1 168 2.35E-42 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_08075 4310e84ea475dad4e9b411a528da8161 333 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 167 310 7.2E-13 T 11-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL543_08075 4310e84ea475dad4e9b411a528da8161 333 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 11-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL543_21745 59330572aa27061e108dc3cd574701bd 402 SUPERFAMILY SSF53098 1 381 8.34E-68 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_21745 59330572aa27061e108dc3cd574701bd 402 Pfam PF01609 Transposase DDE domain 90 326 3.2E-24 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AL543_00890 499357f8ba0efe45d020d1ee1e7b94af 567 Gene3D G3DSA:3.30.310.50 443 551 7.2E-7 T 11-10-2018 AL543_00890 499357f8ba0efe45d020d1ee1e7b94af 567 SUPERFAMILY SSF53738 32 214 1.73E-42 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL543_00890 499357f8ba0efe45d020d1ee1e7b94af 567 SUPERFAMILY SSF53738 302 445 4.32E-31 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL543_00890 499357f8ba0efe45d020d1ee1e7b94af 567 Gene3D G3DSA:3.40.120.10 204 322 1.1E-20 T 11-10-2018 AL543_00890 499357f8ba0efe45d020d1ee1e7b94af 567 SUPERFAMILY SSF55957 463 551 9.42E-15 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL543_00890 499357f8ba0efe45d020d1ee1e7b94af 567 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 227 246 5.4E-7 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL543_00890 499357f8ba0efe45d020d1ee1e7b94af 567 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 294 309 5.4E-7 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL543_00890 499357f8ba0efe45d020d1ee1e7b94af 567 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 138 152 5.4E-7 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL543_00890 499357f8ba0efe45d020d1ee1e7b94af 567 Gene3D G3DSA:3.40.120.10 31 187 1.4E-46 T 11-10-2018 AL543_00890 499357f8ba0efe45d020d1ee1e7b94af 567 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 204 310 7.0E-25 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL543_00890 499357f8ba0efe45d020d1ee1e7b94af 567 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 41 181 6.4E-42 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL543_00890 499357f8ba0efe45d020d1ee1e7b94af 567 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 139 148 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL543_00890 499357f8ba0efe45d020d1ee1e7b94af 567 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 322 441 4.4E-17 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL543_00890 499357f8ba0efe45d020d1ee1e7b94af 567 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 491 547 1.2E-9 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL543_00890 499357f8ba0efe45d020d1ee1e7b94af 567 Gene3D G3DSA:3.40.120.10 323 442 1.0E-31 T 11-10-2018 AL543_00890 499357f8ba0efe45d020d1ee1e7b94af 567 SUPERFAMILY SSF53738 204 312 1.33E-20 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL543_06830 dcf634816d673bd5d5bd07417404470f 581 SUPERFAMILY SSF56519 70 241 2.49E-42 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 AL543_06830 dcf634816d673bd5d5bd07417404470f 581 Pfam PF00905 Penicillin binding protein transpeptidase domain 268 563 4.5E-77 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AL543_06830 dcf634816d673bd5d5bd07417404470f 581 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 26 578 43.829 T 11-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL543_06830 dcf634816d673bd5d5bd07417404470f 581 Gene3D G3DSA:3.90.1310.30 66 241 2.3E-43 T 11-10-2018 AL543_06830 dcf634816d673bd5d5bd07417404470f 581 SUPERFAMILY SSF56601 242 571 4.83E-90 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AL543_06830 dcf634816d673bd5d5bd07417404470f 581 Gene3D G3DSA:3.30.450.330 243 567 2.9E-105 T 11-10-2018 AL543_06830 dcf634816d673bd5d5bd07417404470f 581 Gene3D G3DSA:3.40.710.10 303 485 2.9E-105 T 11-10-2018 AL543_06830 dcf634816d673bd5d5bd07417404470f 581 Pfam PF03717 Penicillin-binding Protein dimerisation domain 75 228 2.7E-17 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AL543_11170 de08baee94992ab3a6b60bdaaa96af43 575 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 43 149 3.2E-23 T 11-10-2018 IPR007831 General secretory system II, protein E, N-terminal AL543_11170 de08baee94992ab3a6b60bdaaa96af43 575 Pfam PF00437 Type II/IV secretion system protein 192 454 4.2E-77 T 11-10-2018 IPR001482 Type II/IV secretion system protein AL543_11170 de08baee94992ab3a6b60bdaaa96af43 575 SMART SM00382 315 436 0.008 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_11170 de08baee94992ab3a6b60bdaaa96af43 575 Gene3D G3DSA:3.30.450.90 148 287 1.7E-43 T 11-10-2018 AL543_11170 de08baee94992ab3a6b60bdaaa96af43 575 SUPERFAMILY SSF160246 3 146 3.92E-39 T 11-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily AL543_11170 de08baee94992ab3a6b60bdaaa96af43 575 Gene3D G3DSA:3.40.50.300 290 566 1.8E-99 T 11-10-2018 AL543_11170 de08baee94992ab3a6b60bdaaa96af43 575 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 382 396 - T 11-10-2018 IPR001482 Type II/IV secretion system protein AL543_11170 de08baee94992ab3a6b60bdaaa96af43 575 SUPERFAMILY SSF52540 174 559 1.78E-92 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_11405 0367e0776834fc2f190162e2118877e1 126 Gene3D G3DSA:2.60.40.1470 1 126 1.9E-48 T 11-10-2018 IPR036767 ApaG domain superfamily AL543_11405 0367e0776834fc2f190162e2118877e1 126 Pfam PF04379 ApaG domain 18 103 2.3E-32 T 11-10-2018 IPR007474 ApaG domain AL543_11405 0367e0776834fc2f190162e2118877e1 126 SUPERFAMILY SSF110069 7 126 1.05E-47 T 11-10-2018 IPR036767 ApaG domain superfamily AL543_11405 0367e0776834fc2f190162e2118877e1 126 Hamap MF_00791 Protein ApaG [apaG]. 1 126 32.345 T 11-10-2018 IPR023065 Uncharacterised protein family ApaG AL543_07260 87556df48484f2183d67c87dc391755b 516 Pfam PF00682 HMGL-like 4 273 1.5E-101 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AL543_07260 87556df48484f2183d67c87dc391755b 516 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 508 42.341 T 11-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AL543_07260 87556df48484f2183d67c87dc391755b 516 SUPERFAMILY SSF110921 393 498 2.09E-20 T 11-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AL543_07260 87556df48484f2183d67c87dc391755b 516 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 11-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AL543_07260 87556df48484f2183d67c87dc391755b 516 Gene3D G3DSA:1.10.238.260 280 393 3.6E-32 T 11-10-2018 AL543_07260 87556df48484f2183d67c87dc391755b 516 Gene3D G3DSA:3.20.20.70 1 277 1.4E-107 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_07260 87556df48484f2183d67c87dc391755b 516 SMART SM00917 369 499 4.1E-28 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AL543_07260 87556df48484f2183d67c87dc391755b 516 Gene3D G3DSA:3.30.160.270 394 500 7.2E-7 T 11-10-2018 AL543_07260 87556df48484f2183d67c87dc391755b 516 SUPERFAMILY SSF51569 1 291 1.15E-100 T 11-10-2018 AL543_07260 87556df48484f2183d67c87dc391755b 516 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 11-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AL543_07260 87556df48484f2183d67c87dc391755b 516 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 498 2.7E-30 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AL543_07260 87556df48484f2183d67c87dc391755b 516 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 496 3.6E-237 T 11-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AL543_07750 77c65c7ea5f4a577d9f13264ec012c6b 144 SUPERFAMILY SSF52080 4 143 4.58E-46 T 11-10-2018 IPR036227 Ribosomal L18e/L15P superfamily AL543_07750 77c65c7ea5f4a577d9f13264ec012c6b 144 Gene3D G3DSA:3.100.10.10 69 144 4.2E-13 T 11-10-2018 AL543_07750 77c65c7ea5f4a577d9f13264ec012c6b 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 3 143 2.4E-49 T 11-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_07750 77c65c7ea5f4a577d9f13264ec012c6b 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 11-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07750 77c65c7ea5f4a577d9f13264ec012c6b 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 3.6E-31 T 11-10-2018 IPR021131 Ribosomal protein L18e/L15P AL543_07750 77c65c7ea5f4a577d9f13264ec012c6b 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 19.001 T 11-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 AL543_03770 196cb1e313d4c8d0d36dff17538f200f 829 Gene3D G3DSA:3.40.50.740 98 623 0.0 T 11-10-2018 AL543_03770 196cb1e313d4c8d0d36dff17538f200f 829 Hamap MF_01630 Periplasmic nitrate reductase [napA]. 1 828 32.534 T 11-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 AL543_03770 196cb1e313d4c8d0d36dff17538f200f 829 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 42 94 8.8E-17 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL543_03770 196cb1e313d4c8d0d36dff17538f200f 829 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 46 63 - T 11-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 AL543_03770 196cb1e313d4c8d0d36dff17538f200f 829 Gene3D G3DSA:3.30.200.210 41 666 0.0 T 11-10-2018 AL543_03770 196cb1e313d4c8d0d36dff17538f200f 829 SUPERFAMILY SSF53706 38 699 1.3E-199 T 11-10-2018 AL543_03770 196cb1e313d4c8d0d36dff17538f200f 829 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 2 828 0.0 T 11-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 AL543_03770 196cb1e313d4c8d0d36dff17538f200f 829 SUPERFAMILY SSF50692 688 828 4.07E-43 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily AL543_03770 196cb1e313d4c8d0d36dff17538f200f 829 Gene3D G3DSA:2.40.40.20 705 828 8.7E-45 T 11-10-2018 AL543_03770 196cb1e313d4c8d0d36dff17538f200f 829 Gene3D G3DSA:3.40.228.10 177 702 0.0 T 11-10-2018 AL543_03770 196cb1e313d4c8d0d36dff17538f200f 829 Pfam PF00384 Molybdopterin oxidoreductase 98 570 5.1E-89 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL543_03770 196cb1e313d4c8d0d36dff17538f200f 829 Pfam PF01568 Molydopterin dinucleotide binding domain 714 822 8.7E-26 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 AL543_03770 196cb1e313d4c8d0d36dff17538f200f 829 SMART SM00926 41 95 1.9E-13 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL543_09245 61237a44ee71f4f70767ced1a708ca6a 370 SUPERFAMILY SSF102114 37 333 4.19E-53 T 11-10-2018 AL543_09245 61237a44ee71f4f70767ced1a708ca6a 370 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 256 358 1.2E-23 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AL543_09245 61237a44ee71f4f70767ced1a708ca6a 370 SMART SM00876 256 359 3.5E-32 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AL543_09245 61237a44ee71f4f70767ced1a708ca6a 370 Pfam PF04055 Radical SAM superfamily 81 221 2.0E-10 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL543_09245 61237a44ee71f4f70767ced1a708ca6a 370 Gene3D G3DSA:3.20.20.70 11 366 5.4E-107 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_09245 61237a44ee71f4f70767ced1a708ca6a 370 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 3 366 1.7E-172 T 11-10-2018 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892 AL543_18710 d7510494f12c68cf0471ce5182eb6546 609 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 90 484 6.8E-56 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain AL543_18710 d7510494f12c68cf0471ce5182eb6546 609 PIRSF PIRSF002741 1 564 3.2E-66 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL543_18710 d7510494f12c68cf0471ce5182eb6546 609 Gene3D G3DSA:3.40.190.10 8 315 1.9E-42 T 11-10-2018 AL543_18710 d7510494f12c68cf0471ce5182eb6546 609 SUPERFAMILY SSF53850 41 559 2.35E-94 T 11-10-2018 AL543_18710 d7510494f12c68cf0471ce5182eb6546 609 Gene3D G3DSA:3.10.105.10 316 540 9.0E-43 T 11-10-2018 AL543_09215 31717da16066d37205908019e8d9752f 769 SMART SM00052 512 759 4.6E-67 T 11-10-2018 IPR001633 EAL domain AL543_09215 31717da16066d37205908019e8d9752f 769 SUPERFAMILY SSF55785 81 203 1.2E-8 T 11-10-2018 IPR035965 PAS domain superfamily AL543_09215 31717da16066d37205908019e8d9752f 769 SMART SM00091 217 283 0.0037 T 11-10-2018 IPR000014 PAS domain AL543_09215 31717da16066d37205908019e8d9752f 769 SMART SM00091 94 161 10.0 T 11-10-2018 IPR000014 PAS domain AL543_09215 31717da16066d37205908019e8d9752f 769 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 336 498 1.6E-29 T 11-10-2018 IPR000160 GGDEF domain AL543_09215 31717da16066d37205908019e8d9752f 769 Pfam PF00990 Diguanylate cyclase, GGDEF domain 339 496 3.2E-33 T 11-10-2018 IPR000160 GGDEF domain AL543_09215 31717da16066d37205908019e8d9752f 769 Pfam PF00563 EAL domain 520 754 1.5E-59 T 11-10-2018 IPR001633 EAL domain AL543_09215 31717da16066d37205908019e8d9752f 769 SMART SM00267 328 500 7.1E-43 T 11-10-2018 IPR000160 GGDEF domain AL543_09215 31717da16066d37205908019e8d9752f 769 Gene3D G3DSA:3.30.450.20 218 329 8.4E-18 T 11-10-2018 AL543_09215 31717da16066d37205908019e8d9752f 769 SUPERFAMILY SSF55073 344 501 8.63E-39 T 11-10-2018 IPR029787 Nucleotide cyclase AL543_09215 31717da16066d37205908019e8d9752f 769 Gene3D G3DSA:3.30.70.270 330 500 4.0E-44 T 11-10-2018 AL543_09215 31717da16066d37205908019e8d9752f 769 SUPERFAMILY SSF55785 202 324 5.63E-19 T 11-10-2018 IPR035965 PAS domain superfamily AL543_09215 31717da16066d37205908019e8d9752f 769 Pfam PF13426 PAS domain 228 327 8.4E-12 T 11-10-2018 IPR000014 PAS domain AL543_09215 31717da16066d37205908019e8d9752f 769 Gene3D G3DSA:3.30.450.20 81 203 3.6E-9 T 11-10-2018 AL543_09215 31717da16066d37205908019e8d9752f 769 Gene3D G3DSA:3.20.20.450 501 761 9.8E-78 T 11-10-2018 IPR035919 EAL domain superfamily AL543_09215 31717da16066d37205908019e8d9752f 769 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 215 333 1.7E-13 T 11-10-2018 IPR000014 PAS domain AL543_09215 31717da16066d37205908019e8d9752f 769 SUPERFAMILY SSF141868 518 762 1.57E-70 T 11-10-2018 IPR035919 EAL domain superfamily AL543_08365 5cbb5b6af6a47053be104a96c498c6f8 90 Pfam PF01192 RNA polymerase Rpb6 10 60 1.7E-17 T 11-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 AL543_08365 5cbb5b6af6a47053be104a96c498c6f8 90 SMART SM01409 8 61 2.4E-16 T 11-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 AL543_08365 5cbb5b6af6a47053be104a96c498c6f8 90 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.837 T 11-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL543_08365 5cbb5b6af6a47053be104a96c498c6f8 90 SUPERFAMILY SSF63562 1 78 6.67E-26 T 11-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 AL543_08365 5cbb5b6af6a47053be104a96c498c6f8 90 Gene3D G3DSA:3.90.940.10 1 90 9.3E-30 T 11-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 AL543_08365 5cbb5b6af6a47053be104a96c498c6f8 90 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 1.0E-29 T 11-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL543_12590 419d16367418f7486543726dc36454fe 237 Pfam PF00072 Response regulator receiver domain 5 112 7.2E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_12590 419d16367418f7486543726dc36454fe 237 SMART SM00448 2 112 7.9E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_12590 419d16367418f7486543726dc36454fe 237 SMART SM00850 141 235 3.3E-30 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AL543_12590 419d16367418f7486543726dc36454fe 237 Gene3D G3DSA:2.40.50.1020 137 236 4.3E-12 T 11-10-2018 AL543_12590 419d16367418f7486543726dc36454fe 237 Gene3D G3DSA:3.40.50.2300 1 125 1.6E-32 T 11-10-2018 AL543_12590 419d16367418f7486543726dc36454fe 237 Pfam PF04397 LytTr DNA-binding domain 142 234 1.1E-25 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AL543_12590 419d16367418f7486543726dc36454fe 237 SUPERFAMILY SSF52172 1 123 1.71E-31 T 11-10-2018 IPR011006 CheY-like superfamily AL543_06215 93aa1e271d2cec454082b9c3ca2b36ab 415 Hamap MF_01063 Esterase FrsA [frsA]. 4 415 55.694 T 11-10-2018 IPR010520 UPF0255 family AL543_06215 93aa1e271d2cec454082b9c3ca2b36ab 415 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 5 414 2.6E-232 T 11-10-2018 IPR010520 UPF0255 family AL543_06215 93aa1e271d2cec454082b9c3ca2b36ab 415 Gene3D G3DSA:3.40.50.1820 18 415 2.2E-113 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL543_06215 93aa1e271d2cec454082b9c3ca2b36ab 415 SUPERFAMILY SSF53474 47 411 1.57E-44 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL543_07805 b5c9a463e207be38c908743088107eba 63 Pfam PF00831 Ribosomal L29 protein 4 60 1.6E-25 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07805 b5c9a463e207be38c908743088107eba 63 SUPERFAMILY SSF46561 1 61 1.7E-23 T 11-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07805 b5c9a463e207be38c908743088107eba 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 3.7E-24 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07805 b5c9a463e207be38c908743088107eba 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 19.159 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07805 b5c9a463e207be38c908743088107eba 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 11-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07805 b5c9a463e207be38c908743088107eba 63 Gene3D G3DSA:1.10.287.310 1 63 1.3E-31 T 11-10-2018 AL543_21090 59cf18c9bde0abb3736f891e450567e1 113 Gene3D G3DSA:2.170.150.70 1 111 1.1E-21 T 11-10-2018 AL543_21090 59cf18c9bde0abb3736f891e450567e1 113 SUPERFAMILY SSF51316 4 82 9.94E-16 T 11-10-2018 IPR011057 Mss4-like superfamily AL543_20960 59cf18c9bde0abb3736f891e450567e1 113 Gene3D G3DSA:2.170.150.70 1 111 1.1E-21 T 11-10-2018 AL543_20960 59cf18c9bde0abb3736f891e450567e1 113 SUPERFAMILY SSF51316 4 82 9.94E-16 T 11-10-2018 IPR011057 Mss4-like superfamily AL543_21155 59cf18c9bde0abb3736f891e450567e1 113 Gene3D G3DSA:2.170.150.70 1 111 1.1E-21 T 11-10-2018 AL543_21155 59cf18c9bde0abb3736f891e450567e1 113 SUPERFAMILY SSF51316 4 82 9.94E-16 T 11-10-2018 IPR011057 Mss4-like superfamily AL543_12825 2c42e38769f26d80832576e933417c58 304 Pfam PF04381 Putative exonuclease, RdgC 1 298 2.8E-122 T 11-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 AL543_12825 2c42e38769f26d80832576e933417c58 304 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 301 37.9 T 11-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 AL543_15810 1c0845897bbbb8b7cb715e319f62e4c9 637 SUPERFAMILY SSF51206 14 143 1.57E-27 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like AL543_15810 1c0845897bbbb8b7cb715e319f62e4c9 637 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 486 630 2.2E-45 T 11-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding AL543_15810 1c0845897bbbb8b7cb715e319f62e4c9 637 SUPERFAMILY SSF54631 159 286 9.57E-27 T 11-10-2018 AL543_15810 1c0845897bbbb8b7cb715e319f62e4c9 637 SMART SM00116 167 224 0.27 T 11-10-2018 IPR000644 CBS domain AL543_15810 1c0845897bbbb8b7cb715e319f62e4c9 637 SMART SM00116 241 288 4.7E-6 T 11-10-2018 IPR000644 CBS domain AL543_15810 1c0845897bbbb8b7cb715e319f62e4c9 637 Gene3D G3DSA:3.10.580.10 142 300 2.3E-31 T 11-10-2018 AL543_15810 1c0845897bbbb8b7cb715e319f62e4c9 637 Gene3D G3DSA:2.60.120.10 8 141 3.2E-23 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL543_15810 1c0845897bbbb8b7cb715e319f62e4c9 637 Pfam PF00027 Cyclic nucleotide-binding domain 45 125 4.2E-14 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AL543_15810 1c0845897bbbb8b7cb715e319f62e4c9 637 SMART SM00100 25 142 2.7E-8 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AL543_15810 1c0845897bbbb8b7cb715e319f62e4c9 637 Pfam PF03445 Putative nucleotidyltransferase DUF294 313 450 2.8E-47 T 11-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 AL543_15810 1c0845897bbbb8b7cb715e319f62e4c9 637 Pfam PF00571 CBS domain 160 223 2.8E-8 T 11-10-2018 IPR000644 CBS domain AL543_15810 1c0845897bbbb8b7cb715e319f62e4c9 637 Pfam PF00571 CBS domain 234 286 1.6E-9 T 11-10-2018 IPR000644 CBS domain AL543_20095 6a3886f53b804c9025df6f0a6db06c57 484 Gene3D G3DSA:3.30.2010.10 71 148 1.0E-6 T 11-10-2018 AL543_20095 6a3886f53b804c9025df6f0a6db06c57 484 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 4 483 39.843 T 11-10-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 AL543_20095 6a3886f53b804c9025df6f0a6db06c57 484 SMART SM00028 426 459 71.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL543_20095 6a3886f53b804c9025df6f0a6db06c57 484 SMART SM00028 307 340 0.14 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL543_20095 6a3886f53b804c9025df6f0a6db06c57 484 Pfam PF14559 Tetratricopeptide repeat 355 416 8.9E-10 T 11-10-2018 AL543_20095 6a3886f53b804c9025df6f0a6db06c57 484 Pfam PF01435 Peptidase family M48 70 255 4.2E-27 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AL543_20095 6a3886f53b804c9025df6f0a6db06c57 484 SUPERFAMILY SSF48452 310 455 1.44E-18 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_20095 6a3886f53b804c9025df6f0a6db06c57 484 Gene3D G3DSA:1.25.40.10 282 457 2.0E-19 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_05780 0ccca599272fb188001422c1caa10e1c 351 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 3 350 3.1E-184 T 11-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 AL543_05780 0ccca599272fb188001422c1caa10e1c 351 PIRSF PIRSF000808 3 344 6.7E-125 T 11-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 AL543_05780 0ccca599272fb188001422c1caa10e1c 351 SUPERFAMILY SSF54197 6 178 1.83E-70 T 11-10-2018 IPR036265 HIT-like superfamily AL543_05780 0ccca599272fb188001422c1caa10e1c 351 Gene3D G3DSA:3.30.428.10 46 177 6.6E-55 T 11-10-2018 IPR036265 HIT-like superfamily AL543_05780 0ccca599272fb188001422c1caa10e1c 351 Gene3D G3DSA:3.30.428.10 178 351 1.9E-70 T 11-10-2018 IPR036265 HIT-like superfamily AL543_05780 0ccca599272fb188001422c1caa10e1c 351 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 185 349 6.5E-67 T 11-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 AL543_05780 0ccca599272fb188001422c1caa10e1c 351 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 153 170 - T 11-10-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 AL543_05780 0ccca599272fb188001422c1caa10e1c 351 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 5 178 9.3E-70 T 11-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 AL543_05780 0ccca599272fb188001422c1caa10e1c 351 SUPERFAMILY SSF54197 181 347 3.91E-52 T 11-10-2018 IPR036265 HIT-like superfamily AL543_03375 732ff8beabfd94fe963e60dcfaff00d6 217 Pfam PF04337 Protein of unknown function, DUF480 5 158 3.7E-64 T 11-10-2018 IPR007432 Protein of unknown function DUF480 AL543_03375 732ff8beabfd94fe963e60dcfaff00d6 217 SUPERFAMILY SSF46785 2 84 3.9E-31 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_03375 732ff8beabfd94fe963e60dcfaff00d6 217 Gene3D G3DSA:1.10.10.10 1 89 1.1E-35 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_03375 732ff8beabfd94fe963e60dcfaff00d6 217 SUPERFAMILY SSF46785 90 173 7.62E-30 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_03375 732ff8beabfd94fe963e60dcfaff00d6 217 Gene3D G3DSA:1.10.10.10 95 175 1.3E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_03375 732ff8beabfd94fe963e60dcfaff00d6 217 Hamap MF_01584 UPF0502 protein YceH [yceH]. 5 216 35.079 T 11-10-2018 IPR007432 Protein of unknown function DUF480 AL543_13275 77a0a2d4fb25fd446051909d8185e8ec 509 Pfam PF04223 Citrate lyase, alpha subunit (CitF) 42 506 8.9E-268 T 11-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 AL543_13275 77a0a2d4fb25fd446051909d8185e8ec 509 PIRSF PIRSF009451 1 508 1.4E-267 T 11-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 AL543_13275 77a0a2d4fb25fd446051909d8185e8ec 509 SUPERFAMILY SSF100950 4 237 2.29E-75 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AL543_13275 77a0a2d4fb25fd446051909d8185e8ec 509 TIGRFAM TIGR01584 citF: citrate lyase, alpha subunit 37 507 8.7E-236 T 11-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 AL543_13275 77a0a2d4fb25fd446051909d8185e8ec 509 SUPERFAMILY SSF100950 240 506 6.98E-63 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AL543_13275 77a0a2d4fb25fd446051909d8185e8ec 509 Gene3D G3DSA:3.40.1080.10 239 508 1.8E-125 T 11-10-2018 AL543_13275 77a0a2d4fb25fd446051909d8185e8ec 509 Gene3D G3DSA:3.40.1080.10 3 237 6.7E-98 T 11-10-2018 AL543_14170 f1ada632877e25c9341045185ac977d7 138 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 3 136 2.1E-68 T 11-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AL543_14170 f1ada632877e25c9341045185ac977d7 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 126 1.1E-23 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL543_14170 f1ada632877e25c9341045185ac977d7 138 ProSitePatterns PS00935 Glyoxalase I signature 2. 72 84 - T 11-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AL543_14170 f1ada632877e25c9341045185ac977d7 138 SUPERFAMILY SSF54593 4 131 8.99E-36 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL543_14170 f1ada632877e25c9341045185ac977d7 138 Gene3D G3DSA:3.10.180.10 3 135 1.7E-50 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL543_14170 f1ada632877e25c9341045185ac977d7 138 ProSitePatterns PS00934 Glyoxalase I signature 1. 8 29 - T 11-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AL543_11230 e7b72982c7bc8f30ce1af7a3f6e75ad2 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 9 154 2.8E-36 T 11-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 AL543_11230 e7b72982c7bc8f30ce1af7a3f6e75ad2 162 Pfam PF04093 rod shape-determining protein MreD 7 154 1.5E-44 T 11-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 AL543_11230 e7b72982c7bc8f30ce1af7a3f6e75ad2 162 PIRSF PIRSF018472 1 162 1.1E-42 T 11-10-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type AL543_08520 17ced3b2e6393574cd42475c5232c678 125 PIRSF PIRSF016821 5 125 2.7E-41 T 11-10-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 AL543_08520 17ced3b2e6393574cd42475c5232c678 125 Pfam PF01479 S4 domain 8 54 9.9E-13 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_08520 17ced3b2e6393574cd42475c5232c678 125 SUPERFAMILY SSF55174 7 104 1.1E-31 T 11-10-2018 AL543_08520 17ced3b2e6393574cd42475c5232c678 125 SMART SM00363 8 71 1.1E-10 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_08520 17ced3b2e6393574cd42475c5232c678 125 Gene3D G3DSA:3.10.290.10 2 106 1.9E-37 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AL543_17945 6ce3ef0dd892e5786ad7cc49cf679bb5 876 Gene3D G3DSA:2.20.25.10 814 871 1.2E-27 T 11-10-2018 AL543_17945 6ce3ef0dd892e5786ad7cc49cf679bb5 876 Gene3D G3DSA:3.40.50.140 1 171 3.0E-67 T 11-10-2018 AL543_17945 6ce3ef0dd892e5786ad7cc49cf679bb5 876 Pfam PF01131 DNA topoisomerase 165 572 3.6E-129 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL543_17945 6ce3ef0dd892e5786ad7cc49cf679bb5 876 SUPERFAMILY SSF56712 3 616 4.84E-200 T 11-10-2018 IPR023405 DNA topoisomerase, type IA, core domain AL543_17945 6ce3ef0dd892e5786ad7cc49cf679bb5 876 SUPERFAMILY SSF57783 750 813 2.55E-19 T 11-10-2018 AL543_17945 6ce3ef0dd892e5786ad7cc49cf679bb5 876 SUPERFAMILY SSF57783 815 871 4.76E-22 T 11-10-2018 AL543_17945 6ce3ef0dd892e5786ad7cc49cf679bb5 876 Gene3D G3DSA:2.70.20.10 221 480 2.7E-162 T 11-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AL543_17945 6ce3ef0dd892e5786ad7cc49cf679bb5 876 Pfam PF01751 Toprim domain 5 150 7.3E-32 T 11-10-2018 IPR006171 TOPRIM domain AL543_17945 6ce3ef0dd892e5786ad7cc49cf679bb5 876 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 605 629 1.3E-4 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AL543_17945 6ce3ef0dd892e5786ad7cc49cf679bb5 876 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 715 751 6.5E-11 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AL543_17945 6ce3ef0dd892e5786ad7cc49cf679bb5 876 SMART SM00437 280 534 5.2E-121 T 11-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 AL543_17945 6ce3ef0dd892e5786ad7cc49cf679bb5 876 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 641 3.5E-250 T 11-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 AL543_17945 6ce3ef0dd892e5786ad7cc49cf679bb5 876 Pfam PF08272 Topoisomerase I zinc-ribbon-like 763 799 1.2E-10 T 11-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 AL543_17945 6ce3ef0dd892e5786ad7cc49cf679bb5 876 Pfam PF08272 Topoisomerase I zinc-ribbon-like 830 870 3.7E-19 T 11-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 AL543_17945 6ce3ef0dd892e5786ad7cc49cf679bb5 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 322 331 7.2E-36 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL543_17945 6ce3ef0dd892e5786ad7cc49cf679bb5 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 114 127 7.2E-36 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL543_17945 6ce3ef0dd892e5786ad7cc49cf679bb5 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 199 217 7.2E-36 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL543_17945 6ce3ef0dd892e5786ad7cc49cf679bb5 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 398 414 7.2E-36 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL543_17945 6ce3ef0dd892e5786ad7cc49cf679bb5 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 497 511 7.2E-36 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL543_17945 6ce3ef0dd892e5786ad7cc49cf679bb5 876 SMART SM00493 3 140 1.8E-30 T 11-10-2018 IPR006171 TOPRIM domain AL543_17945 6ce3ef0dd892e5786ad7cc49cf679bb5 876 SMART SM00436 141 229 1.9E-48 T 11-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 AL543_17945 6ce3ef0dd892e5786ad7cc49cf679bb5 876 SUPERFAMILY SSF57783 706 749 7.31E-7 T 11-10-2018 AL543_17945 6ce3ef0dd892e5786ad7cc49cf679bb5 876 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 738 55.495 T 11-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 AL543_17945 6ce3ef0dd892e5786ad7cc49cf679bb5 876 Gene3D G3DSA:1.10.290.10 288 412 2.7E-162 T 11-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 AL543_17945 6ce3ef0dd892e5786ad7cc49cf679bb5 876 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 317 331 - T 11-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 AL543_17945 6ce3ef0dd892e5786ad7cc49cf679bb5 876 Gene3D G3DSA:3.30.65.10 751 813 5.6E-32 T 11-10-2018 AL543_17945 6ce3ef0dd892e5786ad7cc49cf679bb5 876 Gene3D G3DSA:3.30.65.10 703 750 4.8E-7 T 11-10-2018 AL543_17945 6ce3ef0dd892e5786ad7cc49cf679bb5 876 Gene3D G3DSA:1.10.460.10 173 578 2.7E-162 T 11-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AL543_16485 075577e7569a191ce1f55c676d60ba95 683 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 12 526 2.0E-185 T 11-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset AL543_16485 075577e7569a191ce1f55c676d60ba95 683 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 41 508 5.5E-129 T 11-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein AL543_16485 075577e7569a191ce1f55c676d60ba95 683 Gene3D G3DSA:2.30.110.50 14 336 8.5E-82 T 11-10-2018 AL543_16485 075577e7569a191ce1f55c676d60ba95 683 Gene3D G3DSA:3.55.50.10 104 195 8.5E-82 T 11-10-2018 AL543_16485 075577e7569a191ce1f55c676d60ba95 683 Gene3D G3DSA:3.30.1920.30 228 291 8.5E-82 T 11-10-2018 AL543_16485 075577e7569a191ce1f55c676d60ba95 683 SUPERFAMILY SSF69279 7 190 5.44E-50 T 11-10-2018 AL543_16485 075577e7569a191ce1f55c676d60ba95 683 SUPERFAMILY SSF69279 197 370 7.65E-46 T 11-10-2018 AL543_16485 075577e7569a191ce1f55c676d60ba95 683 SUPERFAMILY SSF69349 447 628 7.06E-48 T 11-10-2018 AL543_16485 075577e7569a191ce1f55c676d60ba95 683 SUPERFAMILY SSF69255 369 456 4.97E-33 T 11-10-2018 AL543_16485 075577e7569a191ce1f55c676d60ba95 683 Pfam PF05954 Phage late control gene D protein (GPD) 41 334 4.9E-75 T 11-10-2018 AL543_16485 075577e7569a191ce1f55c676d60ba95 683 Gene3D G3DSA:2.40.50.230 362 461 8.3E-42 T 11-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily AL543_10305 6ba33ccddc789c0bd3874a19debbdac1 380 Gene3D G3DSA:1.10.287.210 221 319 6.6E-19 T 11-10-2018 AL543_10305 6ba33ccddc789c0bd3874a19debbdac1 380 SUPERFAMILY SSF160355 63 338 3.79E-64 T 11-10-2018 AL543_10305 6ba33ccddc789c0bd3874a19debbdac1 380 Pfam PF13807 G-rich domain on putative tyrosine kinase 332 368 2.1E-7 T 11-10-2018 IPR032807 Tyrosine kinase, G-rich domain AL543_10305 6ba33ccddc789c0bd3874a19debbdac1 380 Gene3D G3DSA:3.30.1890.10 52 220 3.0E-30 T 11-10-2018 AL543_10305 6ba33ccddc789c0bd3874a19debbdac1 380 Pfam PF02706 Chain length determinant protein 24 105 3.5E-18 T 11-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 AL543_19820 f68e24b713a9dbd62feec7dff02b1605 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.8E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_19820 f68e24b713a9dbd62feec7dff02b1605 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.8E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_19820 f68e24b713a9dbd62feec7dff02b1605 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.8E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_19820 f68e24b713a9dbd62feec7dff02b1605 292 Gene3D G3DSA:3.40.190.290 92 291 1.8E-43 T 11-10-2018 AL543_19820 f68e24b713a9dbd62feec7dff02b1605 292 Pfam PF03466 LysR substrate binding domain 87 290 3.9E-40 T 11-10-2018 IPR005119 LysR, substrate-binding AL543_19820 f68e24b713a9dbd62feec7dff02b1605 292 Gene3D G3DSA:1.10.10.10 1 91 2.6E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_19820 f68e24b713a9dbd62feec7dff02b1605 292 SUPERFAMILY SSF53850 89 290 3.95E-34 T 11-10-2018 AL543_19820 f68e24b713a9dbd62feec7dff02b1605 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.7E-20 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_19820 f68e24b713a9dbd62feec7dff02b1605 292 SUPERFAMILY SSF46785 1 86 1.2E-24 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_07660 4cba77f47aa980ba4d6c3a8faa4f2ee6 476 Gene3D G3DSA:2.40.30.10 243 327 5.7E-27 T 11-10-2018 AL543_07660 4cba77f47aa980ba4d6c3a8faa4f2ee6 476 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 33 213 1.6E-13 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL543_07660 4cba77f47aa980ba4d6c3a8faa4f2ee6 476 SUPERFAMILY SSF50465 333 434 1.68E-28 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AL543_07660 4cba77f47aa980ba4d6c3a8faa4f2ee6 476 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 27 433 9.8E-195 T 11-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AL543_07660 4cba77f47aa980ba4d6c3a8faa4f2ee6 476 Gene3D G3DSA:3.40.50.300 5 239 1.3E-72 T 11-10-2018 AL543_07660 4cba77f47aa980ba4d6c3a8faa4f2ee6 476 PRINTS PR00315 GTP-binding elongation factor signature 125 136 9.6E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL543_07660 4cba77f47aa980ba4d6c3a8faa4f2ee6 476 PRINTS PR00315 GTP-binding elongation factor signature 162 171 9.6E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL543_07660 4cba77f47aa980ba4d6c3a8faa4f2ee6 476 PRINTS PR00315 GTP-binding elongation factor signature 89 97 9.6E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL543_07660 4cba77f47aa980ba4d6c3a8faa4f2ee6 476 PRINTS PR00315 GTP-binding elongation factor signature 109 119 9.6E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL543_07660 4cba77f47aa980ba4d6c3a8faa4f2ee6 476 PRINTS PR00315 GTP-binding elongation factor signature 28 41 9.6E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL543_07660 4cba77f47aa980ba4d6c3a8faa4f2ee6 476 SUPERFAMILY SSF52540 19 236 2.15E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_07660 4cba77f47aa980ba4d6c3a8faa4f2ee6 476 Gene3D G3DSA:2.40.30.10 331 433 1.9E-27 T 11-10-2018 AL543_07660 4cba77f47aa980ba4d6c3a8faa4f2ee6 476 SUPERFAMILY SSF50447 242 324 4.78E-24 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AL543_07660 4cba77f47aa980ba4d6c3a8faa4f2ee6 476 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 82 97 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site AL543_07660 4cba77f47aa980ba4d6c3a8faa4f2ee6 476 Pfam PF00009 Elongation factor Tu GTP binding domain 26 226 3.8E-44 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL543_07660 4cba77f47aa980ba4d6c3a8faa4f2ee6 476 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 18 474 53.752 T 11-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AL543_20185 d2c93377a716b88f79cf5083dabd198b 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 9.5E-40 T 11-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 AL543_20185 d2c93377a716b88f79cf5083dabd198b 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 45.537 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 AL543_20185 d2c93377a716b88f79cf5083dabd198b 363 PIRSF PIRSF006641 1 363 1.4E-157 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 AL543_20185 d2c93377a716b88f79cf5083dabd198b 363 Gene3D G3DSA:3.10.20.30 48 362 1.9E-151 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AL543_20185 d2c93377a716b88f79cf5083dabd198b 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.9E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AL543_20185 d2c93377a716b88f79cf5083dabd198b 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.9E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AL543_20185 d2c93377a716b88f79cf5083dabd198b 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.9E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AL543_20185 d2c93377a716b88f79cf5083dabd198b 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.9E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AL543_20185 d2c93377a716b88f79cf5083dabd198b 363 SUPERFAMILY SSF81271 279 360 5.23E-37 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AL543_20185 d2c93377a716b88f79cf5083dabd198b 363 Gene3D G3DSA:3.40.50.300 4 278 1.9E-151 T 11-10-2018 AL543_20185 d2c93377a716b88f79cf5083dabd198b 363 Gene3D G3DSA:1.10.150.300 120 200 1.9E-151 T 11-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 AL543_20185 d2c93377a716b88f79cf5083dabd198b 363 SUPERFAMILY SSF52540 3 301 2.68E-83 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_20185 d2c93377a716b88f79cf5083dabd198b 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 5.1E-169 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 AL543_20185 d2c93377a716b88f79cf5083dabd198b 363 Pfam PF01926 50S ribosome-binding GTPase 5 115 5.6E-22 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AL543_03965 473627c8972956ac631d6dc35cadc780 181 Pfam PF00857 Isochorismatase family 4 166 7.1E-32 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 AL543_03965 473627c8972956ac631d6dc35cadc780 181 Gene3D G3DSA:3.40.50.850 1 162 6.8E-40 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AL543_03965 473627c8972956ac631d6dc35cadc780 181 SUPERFAMILY SSF52499 2 177 1.44E-41 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AL543_07220 1dcd6d264da040c0cf940b1f4b08a831 409 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AL543_07220 1dcd6d264da040c0cf940b1f4b08a831 409 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AL543_07220 1dcd6d264da040c0cf940b1f4b08a831 409 Gene3D G3DSA:3.30.70.260 328 408 4.3E-33 T 11-10-2018 AL543_07220 1dcd6d264da040c0cf940b1f4b08a831 409 Gene3D G3DSA:3.40.50.720 14 312 2.1E-112 T 11-10-2018 AL543_07220 1dcd6d264da040c0cf940b1f4b08a831 409 Gene3D G3DSA:3.40.50.720 109 297 2.1E-112 T 11-10-2018 AL543_07220 1dcd6d264da040c0cf940b1f4b08a831 409 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 7.1E-54 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AL543_07220 1dcd6d264da040c0cf940b1f4b08a831 409 SUPERFAMILY SSF55021 333 408 2.37E-18 T 11-10-2018 AL543_07220 1dcd6d264da040c0cf940b1f4b08a831 409 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 13 326 3.1E-38 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 AL543_07220 1dcd6d264da040c0cf940b1f4b08a831 409 SUPERFAMILY SSF52283 7 136 3.59E-49 T 11-10-2018 AL543_07220 1dcd6d264da040c0cf940b1f4b08a831 409 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AL543_07220 1dcd6d264da040c0cf940b1f4b08a831 409 SUPERFAMILY SSF51735 108 295 6.23E-60 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_11200 4862acf3b0bb619e3892c78d522f89ce 202 Pfam PF07963 Prokaryotic N-terminal methylation motif 24 45 5.9E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL543_11200 4862acf3b0bb619e3892c78d522f89ce 202 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 24 45 1.8E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL543_11200 4862acf3b0bb619e3892c78d522f89ce 202 SUPERFAMILY SSF54523 26 81 8.63E-5 T 11-10-2018 AL543_11200 4862acf3b0bb619e3892c78d522f89ce 202 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 24 44 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL543_06500 41623955e466271b33effd70a1d64ff0 384 Gene3D G3DSA:3.30.450.40 18 159 1.3E-7 T 11-10-2018 IPR029016 GAF-like domain superfamily AL543_06500 41623955e466271b33effd70a1d64ff0 384 SUPERFAMILY SSF55781 33 149 1.01E-9 T 11-10-2018 AL543_06500 41623955e466271b33effd70a1d64ff0 384 Pfam PF13487 HD domain 244 313 5.3E-14 T 11-10-2018 AL543_06500 41623955e466271b33effd70a1d64ff0 384 Gene3D G3DSA:1.10.3210.10 175 375 4.1E-46 T 11-10-2018 AL543_06500 41623955e466271b33effd70a1d64ff0 384 SUPERFAMILY SSF109604 199 361 1.29E-22 T 11-10-2018 AL543_14075 b7fa9b3c4cc9d7feeec0427b70cd234c 495 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 69 93 - T 11-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 AL543_14075 b7fa9b3c4cc9d7feeec0427b70cd234c 495 Pfam PF00854 POT family 81 444 2.3E-80 T 11-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 AL543_14075 b7fa9b3c4cc9d7feeec0427b70cd234c 495 Gene3D G3DSA:1.20.1250.20 4 483 1.3E-107 T 11-10-2018 AL543_14075 b7fa9b3c4cc9d7feeec0427b70cd234c 495 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 8 482 4.9E-128 T 11-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 AL543_14075 b7fa9b3c4cc9d7feeec0427b70cd234c 495 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 149 161 - T 11-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 AL543_14075 b7fa9b3c4cc9d7feeec0427b70cd234c 495 SUPERFAMILY SSF103473 3 203 1.83E-19 T 11-10-2018 IPR036259 MFS transporter superfamily AL543_14075 b7fa9b3c4cc9d7feeec0427b70cd234c 495 SUPERFAMILY SSF103473 214 481 7.46E-9 T 11-10-2018 IPR036259 MFS transporter superfamily AL543_14195 4296ec00dbe5ac9b0145e0110cff2708 889 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 444 455 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL543_14195 4296ec00dbe5ac9b0145e0110cff2708 889 Gene3D G3DSA:1.10.1060.10 391 472 9.1E-12 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL543_14195 4296ec00dbe5ac9b0145e0110cff2708 889 Pfam PF13375 RnfC Barrel sandwich hybrid domain 41 143 1.5E-35 T 11-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain AL543_14195 4296ec00dbe5ac9b0145e0110cff2708 889 SUPERFAMILY SSF46548 363 473 2.62E-21 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL543_14195 4296ec00dbe5ac9b0145e0110cff2708 889 Gene3D G3DSA:3.40.50.11540 172 318 5.8E-13 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL543_14195 4296ec00dbe5ac9b0145e0110cff2708 889 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 40 474 8.6E-200 T 11-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 AL543_14195 4296ec00dbe5ac9b0145e0110cff2708 889 SUPERFAMILY SSF142019 122 329 2.09E-60 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL543_14195 4296ec00dbe5ac9b0145e0110cff2708 889 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 167 310 3.3E-48 T 11-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL543_14195 4296ec00dbe5ac9b0145e0110cff2708 889 Pfam PF12838 4Fe-4S dicluster domain 404 458 2.8E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL543_14195 4296ec00dbe5ac9b0145e0110cff2708 889 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 807 265.954 T 11-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 AL543_14195 4296ec00dbe5ac9b0145e0110cff2708 889 Pfam PF10531 SLBB domain 323 372 4.5E-9 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL543_10465 c44e900a5a2abbe6a95d72b0216040dc 332 Gene3D G3DSA:3.40.50.2300 67 308 4.8E-68 T 11-10-2018 AL543_10465 c44e900a5a2abbe6a95d72b0216040dc 332 Gene3D G3DSA:3.40.50.2300 164 292 4.8E-68 T 11-10-2018 AL543_10465 c44e900a5a2abbe6a95d72b0216040dc 332 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 65 314 9.8E-33 T 11-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain AL543_10465 c44e900a5a2abbe6a95d72b0216040dc 332 Gene3D G3DSA:1.10.260.40 1 64 3.6E-16 T 11-10-2018 AL543_10465 c44e900a5a2abbe6a95d72b0216040dc 332 SMART SM00354 6 76 3.8E-25 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL543_10465 c44e900a5a2abbe6a95d72b0216040dc 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 53 1.8E-15 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL543_10465 c44e900a5a2abbe6a95d72b0216040dc 332 SUPERFAMILY SSF47413 6 64 2.35E-13 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL543_10465 c44e900a5a2abbe6a95d72b0216040dc 332 SUPERFAMILY SSF53822 64 325 8.05E-58 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AL543_10465 c44e900a5a2abbe6a95d72b0216040dc 332 ProSitePatterns PS00356 LacI-type HTH domain signature. 9 27 - T 11-10-2018 AL543_07885 fe9636a6751392685c318ab8ab55c27d 200 SUPERFAMILY SSF54534 2 140 1.91E-35 T 11-10-2018 AL543_07885 fe9636a6751392685c318ab8ab55c27d 200 Gene3D G3DSA:2.40.10.330 71 121 4.7E-60 T 11-10-2018 AL543_07885 fe9636a6751392685c318ab8ab55c27d 200 Gene3D G3DSA:3.10.50.40 3 154 4.7E-60 T 11-10-2018 AL543_07885 fe9636a6751392685c318ab8ab55c27d 200 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 3 136 2.9E-11 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AL543_13610 282d64d3620b42413828a5d6eea884fe 259 Gene3D G3DSA:3.40.50.1010 1 166 1.3E-51 T 11-10-2018 AL543_13610 282d64d3620b42413828a5d6eea884fe 259 Gene3D G3DSA:1.10.150.20 167 254 5.4E-22 T 11-10-2018 AL543_13610 282d64d3620b42413828a5d6eea884fe 259 Hamap MF_01192 Flap endonuclease Xni [xni]. 2 255 45.192 T 11-10-2018 IPR022895 Flap endonuclease Xni GO:0048256 AL543_13610 282d64d3620b42413828a5d6eea884fe 259 SUPERFAMILY SSF47807 164 257 4.04E-20 T 11-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily AL543_13610 282d64d3620b42413828a5d6eea884fe 259 SUPERFAMILY SSF88723 4 164 1.02E-38 T 11-10-2018 IPR029060 PIN-like domain superfamily AL543_13610 282d64d3620b42413828a5d6eea884fe 259 SMART SM00475 3 254 1.1E-60 T 11-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 AL543_13610 282d64d3620b42413828a5d6eea884fe 259 SMART SM00279 167 202 2.9E-8 T 11-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 AL543_13610 282d64d3620b42413828a5d6eea884fe 259 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 161 1.2E-31 T 11-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 AL543_13610 282d64d3620b42413828a5d6eea884fe 259 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 165 257 4.4E-23 T 11-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 AL543_15855 0fdbf3ea51fc01dda4c30073ed3d866d 417 Pfam PF03222 Tryptophan/tyrosine permease family 28 413 8.5E-17 T 11-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 AL543_01675 a49ec8fd9a09b1c0e305b21531f2f567 291 Pfam PF01039 Carboxyl transferase domain 101 239 6.1E-14 T 11-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 AL543_01675 a49ec8fd9a09b1c0e305b21531f2f567 291 SUPERFAMILY SSF52096 25 282 9.07E-82 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AL543_01675 a49ec8fd9a09b1c0e305b21531f2f567 291 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 4.2E-36 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AL543_01675 a49ec8fd9a09b1c0e305b21531f2f567 291 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 4.2E-36 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AL543_01675 a49ec8fd9a09b1c0e305b21531f2f567 291 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 4.2E-36 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AL543_01675 a49ec8fd9a09b1c0e305b21531f2f567 291 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 4.2E-36 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AL543_01675 a49ec8fd9a09b1c0e305b21531f2f567 291 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 4.2E-36 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AL543_01675 a49ec8fd9a09b1c0e305b21531f2f567 291 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 36.353 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AL543_01675 a49ec8fd9a09b1c0e305b21531f2f567 291 Gene3D G3DSA:3.90.226.10 25 285 9.6E-78 T 11-10-2018 AL543_01675 a49ec8fd9a09b1c0e305b21531f2f567 291 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 284 5.2E-128 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AL543_05975 ffda3f3e32f6f26c287be17611b64f72 351 SUPERFAMILY SSF55874 206 336 3.8E-14 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_05975 ffda3f3e32f6f26c287be17611b64f72 351 Gene3D G3DSA:3.30.565.10 206 338 2.1E-14 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_05975 ffda3f3e32f6f26c287be17611b64f72 351 Pfam PF06580 Histidine kinase 151 229 4.9E-23 T 11-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 AL543_05975 ffda3f3e32f6f26c287be17611b64f72 351 SMART SM00387 244 342 8.9E-5 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_02205 81397eae8a30768f56a99b44e9cc28ba 334 Gene3D G3DSA:3.40.50.2300 161 290 2.1E-87 T 11-10-2018 AL543_02205 81397eae8a30768f56a99b44e9cc28ba 334 Gene3D G3DSA:3.40.50.2300 69 322 2.1E-87 T 11-10-2018 AL543_02205 81397eae8a30768f56a99b44e9cc28ba 334 SUPERFAMILY SSF47413 1 59 1.01E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL543_02205 81397eae8a30768f56a99b44e9cc28ba 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.7E-6 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL543_02205 81397eae8a30768f56a99b44e9cc28ba 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.7E-6 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL543_02205 81397eae8a30768f56a99b44e9cc28ba 334 Gene3D G3DSA:1.10.260.40 3 59 2.0E-23 T 11-10-2018 AL543_02205 81397eae8a30768f56a99b44e9cc28ba 334 SMART SM00354 1 71 8.2E-36 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL543_02205 81397eae8a30768f56a99b44e9cc28ba 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 3.6E-20 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL543_02205 81397eae8a30768f56a99b44e9cc28ba 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 11-10-2018 AL543_02205 81397eae8a30768f56a99b44e9cc28ba 334 Pfam PF13377 Periplasmic binding protein-like domain 170 330 1.8E-44 T 11-10-2018 AL543_02205 81397eae8a30768f56a99b44e9cc28ba 334 SUPERFAMILY SSF53822 60 331 6.67E-93 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AL543_15995 b0eb3278c27cde373d4d46efcde451d5 337 Pfam PF02653 Branched-chain amino acid transport system / permease component 42 326 3.8E-48 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AL543_00800 4b100f7a7f85ecb4c687f1b7e2c3751e 378 SUPERFAMILY SSF51395 7 375 9.16E-99 T 11-10-2018 AL543_00800 4b100f7a7f85ecb4c687f1b7e2c3751e 378 PIRSF PIRSF000138 2 378 1.5E-121 T 11-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 AL543_00800 4b100f7a7f85ecb4c687f1b7e2c3751e 378 Pfam PF01070 FMN-dependent dehydrogenase 13 375 1.8E-126 T 11-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 AL543_00800 4b100f7a7f85ecb4c687f1b7e2c3751e 378 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 11-10-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 AL543_00800 4b100f7a7f85ecb4c687f1b7e2c3751e 378 Hamap MF_01559 L-lactate dehydrogenase [lldD]. 1 378 72.187 T 11-10-2018 IPR020920 L-lactate dehydrogenase, bacterial GO:0004457|GO:0006089|GO:0010181|GO:0055114 AL543_00800 4b100f7a7f85ecb4c687f1b7e2c3751e 378 Gene3D G3DSA:3.20.20.70 2 378 1.2E-125 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_04535 5ffee3b1cd9ad86970c72d6c8f3b8292 189 Pfam PF04264 YceI-like domain 25 184 3.6E-37 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AL543_04535 5ffee3b1cd9ad86970c72d6c8f3b8292 189 Hamap MF_00780 Protein YceI [yceI]. 1 189 43.498 T 11-10-2018 IPR023480 Uncharacterised protein family UPF0312/YceI AL543_04535 5ffee3b1cd9ad86970c72d6c8f3b8292 189 SUPERFAMILY SSF101874 22 186 1.96E-49 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily AL543_04535 5ffee3b1cd9ad86970c72d6c8f3b8292 189 SMART SM00867 24 187 4.1E-66 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AL543_04535 5ffee3b1cd9ad86970c72d6c8f3b8292 189 Gene3D G3DSA:2.40.128.110 23 189 5.9E-51 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily AL543_06655 6db84f19d701acac9fd18061db263758 238 Gene3D G3DSA:3.40.50.2300 2 121 7.3E-33 T 11-10-2018 AL543_06655 6db84f19d701acac9fd18061db263758 238 SUPERFAMILY SSF52172 2 129 2.56E-36 T 11-10-2018 IPR011006 CheY-like superfamily AL543_06655 6db84f19d701acac9fd18061db263758 238 SMART SM00448 4 114 3.6E-37 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_06655 6db84f19d701acac9fd18061db263758 238 SUPERFAMILY SSF46894 137 233 5.1E-21 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL543_06655 6db84f19d701acac9fd18061db263758 238 SMART SM00862 156 232 2.4E-14 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL543_06655 6db84f19d701acac9fd18061db263758 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 2.8E-17 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL543_06655 6db84f19d701acac9fd18061db263758 238 Pfam PF00072 Response regulator receiver domain 6 113 7.0E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_06655 6db84f19d701acac9fd18061db263758 238 Gene3D G3DSA:1.10.10.10 122 236 4.9E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_12970 b78eac56b632b01c096ab367beb36d48 171 SMART SM00271 1 66 1.2E-8 T 11-10-2018 IPR001623 DnaJ domain AL543_12970 b78eac56b632b01c096ab367beb36d48 171 SUPERFAMILY SSF46565 1 74 9.55E-18 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AL543_12970 b78eac56b632b01c096ab367beb36d48 171 SUPERFAMILY SSF47144 78 170 6.54E-25 T 11-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL543_12970 b78eac56b632b01c096ab367beb36d48 171 Pfam PF07743 HSCB C-terminal oligomerisation domain 87 163 5.1E-19 T 11-10-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL543_12970 b78eac56b632b01c096ab367beb36d48 171 Pfam PF00226 DnaJ domain 3 70 4.2E-7 T 11-10-2018 IPR001623 DnaJ domain AL543_12970 b78eac56b632b01c096ab367beb36d48 171 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 170 26.24 T 11-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL543_12970 b78eac56b632b01c096ab367beb36d48 171 Gene3D G3DSA:1.10.287.110 1 79 1.9E-23 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AL543_12970 b78eac56b632b01c096ab367beb36d48 171 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 169 1.3E-42 T 11-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL543_12970 b78eac56b632b01c096ab367beb36d48 171 Gene3D G3DSA:1.20.1280.20 80 171 1.4E-28 T 11-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL543_10720 71e5156efcb830396afe109eccde6c94 269 ProSitePatterns PS00893 Nudix box signature. 171 192 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AL543_10720 71e5156efcb830396afe109eccde6c94 269 SUPERFAMILY SSF55811 69 255 1.7E-43 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AL543_10720 71e5156efcb830396afe109eccde6c94 269 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 106 136 1.5E-9 T 11-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 AL543_10720 71e5156efcb830396afe109eccde6c94 269 Gene3D G3DSA:3.90.79.20 4 137 9.8E-35 T 11-10-2018 AL543_10720 71e5156efcb830396afe109eccde6c94 269 Gene3D G3DSA:3.90.79.10 138 267 8.8E-41 T 11-10-2018 AL543_10720 71e5156efcb830396afe109eccde6c94 269 Pfam PF00293 NUDIX domain 144 245 2.4E-19 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL543_10720 71e5156efcb830396afe109eccde6c94 269 Hamap MF_00297 NADH pyrophosphatase [nudC]. 10 269 44.605 T 11-10-2018 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 AL543_10720 71e5156efcb830396afe109eccde6c94 269 PRINTS PR00502 NUDIX hydrolase family signature 180 195 5.6E-5 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL543_10720 71e5156efcb830396afe109eccde6c94 269 PRINTS PR00502 NUDIX hydrolase family signature 166 180 5.6E-5 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL543_01530 ae74768154081b66c44b87d7192737f5 526 SMART SM00267 358 526 7.8E-34 T 11-10-2018 IPR000160 GGDEF domain AL543_01530 ae74768154081b66c44b87d7192737f5 526 SUPERFAMILY SSF48452 38 191 4.64E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_01530 ae74768154081b66c44b87d7192737f5 526 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 366 525 7.9E-33 T 11-10-2018 IPR000160 GGDEF domain AL543_01530 ae74768154081b66c44b87d7192737f5 526 Pfam PF00990 Diguanylate cyclase, GGDEF domain 370 522 4.0E-34 T 11-10-2018 IPR000160 GGDEF domain AL543_01530 ae74768154081b66c44b87d7192737f5 526 SUPERFAMILY SSF48452 171 317 9.28E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_01530 ae74768154081b66c44b87d7192737f5 526 SUPERFAMILY SSF55073 374 525 1.41E-35 T 11-10-2018 IPR029787 Nucleotide cyclase AL543_01530 ae74768154081b66c44b87d7192737f5 526 Gene3D G3DSA:3.30.70.270 356 526 1.3E-42 T 11-10-2018 AL543_01530 ae74768154081b66c44b87d7192737f5 526 Gene3D G3DSA:1.25.40.10 31 320 1.6E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_07065 8ef45bd055efc808c60a9d4a25c2ab67 270 SUPERFAMILY SSF101386 3 103 4.22E-23 T 11-10-2018 AL543_07065 8ef45bd055efc808c60a9d4a25c2ab67 270 TIGRFAM TIGR00444 mazG: MazG family protein 11 260 6.0E-104 T 11-10-2018 IPR011551 NTP pyrophosphohydrolase MazG AL543_07065 8ef45bd055efc808c60a9d4a25c2ab67 270 Gene3D G3DSA:1.10.287.1080 132 265 5.4E-47 T 11-10-2018 AL543_07065 8ef45bd055efc808c60a9d4a25c2ab67 270 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 28 101 4.5E-26 T 11-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core AL543_07065 8ef45bd055efc808c60a9d4a25c2ab67 270 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 171 229 2.2E-7 T 11-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core AL543_07065 8ef45bd055efc808c60a9d4a25c2ab67 270 SUPERFAMILY SSF101386 138 240 5.72E-25 T 11-10-2018 AL543_07065 8ef45bd055efc808c60a9d4a25c2ab67 270 Gene3D G3DSA:1.10.287.1080 2 126 1.4E-44 T 11-10-2018 AL543_17885 2cd5823b8474d55ccea766454624a1f9 260 Pfam PF08241 Methyltransferase domain 52 148 3.5E-13 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AL543_17885 2cd5823b8474d55ccea766454624a1f9 260 SUPERFAMILY SSF53335 5 259 4.69E-33 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL543_17885 2cd5823b8474d55ccea766454624a1f9 260 Gene3D G3DSA:3.40.50.150 9 260 9.3E-60 T 11-10-2018 AL543_17885 2cd5823b8474d55ccea766454624a1f9 260 Hamap MF_02057 tRNA 5-carboxymethoxyuridine methyltransferase [cmoM]. 3 259 41.844 T 11-10-2018 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase GO:0008168 AL543_04015 f0353660d3a19317ad8c301e746d89f8 316 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 11-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AL543_04015 f0353660d3a19317ad8c301e746d89f8 316 Hamap MF_00492 Transaldolase [tal]. 2 316 51.304 T 11-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AL543_04015 f0353660d3a19317ad8c301e746d89f8 316 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 312 9.7E-102 T 11-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AL543_04015 f0353660d3a19317ad8c301e746d89f8 316 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 11-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AL543_04015 f0353660d3a19317ad8c301e746d89f8 316 Gene3D G3DSA:3.20.20.70 2 316 9.3E-139 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_04015 f0353660d3a19317ad8c301e746d89f8 316 TIGRFAM TIGR00874 talAB: transaldolase 3 316 1.2E-154 T 11-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AL543_04015 f0353660d3a19317ad8c301e746d89f8 316 SUPERFAMILY SSF51569 1 315 5.23E-115 T 11-10-2018 AL543_15215 6b698f58f248aa47d4fcd5f8e9deb5d7 595 SUPERFAMILY SSF52540 348 580 1.55E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_15215 6b698f58f248aa47d4fcd5f8e9deb5d7 595 SUPERFAMILY SSF90123 12 331 1.7E-54 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AL543_15215 6b698f58f248aa47d4fcd5f8e9deb5d7 595 SMART SM00382 375 558 7.5E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_15215 6b698f58f248aa47d4fcd5f8e9deb5d7 595 Gene3D G3DSA:3.40.50.300 343 593 1.9E-67 T 11-10-2018 AL543_15215 6b698f58f248aa47d4fcd5f8e9deb5d7 595 Gene3D G3DSA:1.20.1560.10 2 334 1.4E-49 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AL543_15215 6b698f58f248aa47d4fcd5f8e9deb5d7 595 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 20 554 9.6E-180 T 11-10-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 AL543_15215 6b698f58f248aa47d4fcd5f8e9deb5d7 595 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_15215 6b698f58f248aa47d4fcd5f8e9deb5d7 595 Pfam PF00005 ABC transporter 369 512 6.8E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_15215 6b698f58f248aa47d4fcd5f8e9deb5d7 595 Pfam PF00664 ABC transporter transmembrane region 25 292 5.4E-40 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AL543_06340 105303c07fcc54e8f0839bf441a43892 226 SUPERFAMILY SSF51182 115 209 8.43E-13 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AL543_06340 105303c07fcc54e8f0839bf441a43892 226 Pfam PF13490 Putative zinc-finger 9 37 8.2E-6 T 11-10-2018 IPR027383 Putative zinc-finger AL543_06340 105303c07fcc54e8f0839bf441a43892 226 TIGRFAM TIGR02451 anti_sig_ChrR: anti-sigma factor, putative, ChrR family 3 223 1.6E-85 T 11-10-2018 IPR012807 Anti-sigma factor ChrR, putative AL543_06340 105303c07fcc54e8f0839bf441a43892 226 Pfam PF12973 ChrR Cupin-like domain 122 200 3.7E-12 T 11-10-2018 IPR025979 ChrR-like cupin domain AL543_06340 105303c07fcc54e8f0839bf441a43892 226 Gene3D G3DSA:1.10.10.1320 1 112 3.6E-18 T 11-10-2018 AL543_06340 105303c07fcc54e8f0839bf441a43892 226 Gene3D G3DSA:2.60.120.10 114 204 6.9E-23 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL543_10145 8a0a1ad63f03ae8a059ee3ddff65b133 238 Hamap MF_00564 Ribonuclease PH [rph]. 11 237 44.149 T 11-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 AL543_10145 8a0a1ad63f03ae8a059ee3ddff65b133 238 SUPERFAMILY SSF54211 1 181 3.44E-46 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL543_10145 8a0a1ad63f03ae8a059ee3ddff65b133 238 Gene3D G3DSA:3.30.230.70 10 236 3.7E-63 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL543_10145 8a0a1ad63f03ae8a059ee3ddff65b133 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 2.3E-113 T 11-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 AL543_10145 8a0a1ad63f03ae8a059ee3ddff65b133 238 SUPERFAMILY SSF55666 153 234 1.07E-25 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL543_10145 8a0a1ad63f03ae8a059ee3ddff65b133 238 Pfam PF03725 3' exoribonuclease family, domain 2 159 224 2.7E-11 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL543_10145 8a0a1ad63f03ae8a059ee3ddff65b133 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 11-10-2018 IPR018336 Ribonuclease PH, conserved site AL543_10145 8a0a1ad63f03ae8a059ee3ddff65b133 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 1.2E-24 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL543_11335 6cc256487157b7e0e54e7076d95b8b66 145 Pfam PF00582 Universal stress protein family 1 142 1.9E-33 T 11-10-2018 IPR006016 UspA AL543_11335 6cc256487157b7e0e54e7076d95b8b66 145 SUPERFAMILY SSF52402 2 143 3.1E-36 T 11-10-2018 AL543_11335 6cc256487157b7e0e54e7076d95b8b66 145 PRINTS PR01438 Universal stress protein signature 120 142 7.4E-12 T 11-10-2018 IPR006015 Universal stress protein A AL543_11335 6cc256487157b7e0e54e7076d95b8b66 145 PRINTS PR01438 Universal stress protein signature 102 114 7.4E-12 T 11-10-2018 IPR006015 Universal stress protein A AL543_11335 6cc256487157b7e0e54e7076d95b8b66 145 PRINTS PR01438 Universal stress protein signature 2 20 7.4E-12 T 11-10-2018 IPR006015 Universal stress protein A AL543_11335 6cc256487157b7e0e54e7076d95b8b66 145 PIRSF PIRSF006276 1 145 5.3E-20 T 11-10-2018 IPR006015 Universal stress protein A AL543_11335 6cc256487157b7e0e54e7076d95b8b66 145 Gene3D G3DSA:3.40.50.620 1 142 3.6E-37 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL543_01125 e923f101cc6297338eb1857acb990faf 237 Pfam PF08448 PAS fold 13 124 1.7E-22 T 11-10-2018 IPR013656 PAS fold-4 AL543_01125 e923f101cc6297338eb1857acb990faf 237 SUPERFAMILY SSF46894 150 215 2.96E-13 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL543_01125 e923f101cc6297338eb1857acb990faf 237 Pfam PF00196 Bacterial regulatory proteins, luxR family 156 210 3.3E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_01125 e923f101cc6297338eb1857acb990faf 237 Gene3D G3DSA:1.10.10.10 152 215 1.0E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_01125 e923f101cc6297338eb1857acb990faf 237 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 6.5E-7 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_01125 e923f101cc6297338eb1857acb990faf 237 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 6.5E-7 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_01125 e923f101cc6297338eb1857acb990faf 237 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 6.5E-7 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_01125 e923f101cc6297338eb1857acb990faf 237 Gene3D G3DSA:3.30.450.20 8 128 1.1E-14 T 11-10-2018 AL543_01125 e923f101cc6297338eb1857acb990faf 237 SUPERFAMILY SSF55785 22 123 6.11E-12 T 11-10-2018 IPR035965 PAS domain superfamily AL543_01125 e923f101cc6297338eb1857acb990faf 237 SMART SM00421 153 210 1.2E-7 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_04050 35a296dc6c61241f97d7f32277f1d66e 411 SMART SM00852 184 321 7.0E-42 T 11-10-2018 IPR001453 MoaB/Mog domain AL543_04050 35a296dc6c61241f97d7f32277f1d66e 411 Gene3D G3DSA:3.40.980.10 179 331 3.6E-142 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily AL543_04050 35a296dc6c61241f97d7f32277f1d66e 411 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 257 290 - T 11-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 AL543_04050 35a296dc6c61241f97d7f32277f1d66e 411 SUPERFAMILY SSF63882 7 180 9.42E-55 T 11-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL543_04050 35a296dc6c61241f97d7f32277f1d66e 411 Pfam PF03454 MoeA C-terminal region (domain IV) 336 406 5.0E-21 T 11-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL543_04050 35a296dc6c61241f97d7f32277f1d66e 411 Gene3D G3DSA:3.90.105.10 31 178 3.6E-142 T 11-10-2018 AL543_04050 35a296dc6c61241f97d7f32277f1d66e 411 SUPERFAMILY SSF63867 332 410 1.57E-22 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL543_04050 35a296dc6c61241f97d7f32277f1d66e 411 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 180 317 3.7E-32 T 11-10-2018 IPR001453 MoaB/Mog domain AL543_04050 35a296dc6c61241f97d7f32277f1d66e 411 Pfam PF03453 MoeA N-terminal region (domain I and II) 11 171 3.7E-43 T 11-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL543_04050 35a296dc6c61241f97d7f32277f1d66e 411 Pfam PF00994 Probable molybdopterin binding domain 186 320 1.9E-25 T 11-10-2018 IPR001453 MoaB/Mog domain AL543_04050 35a296dc6c61241f97d7f32277f1d66e 411 Gene3D G3DSA:2.170.190.11 53 145 3.6E-142 T 11-10-2018 AL543_04050 35a296dc6c61241f97d7f32277f1d66e 411 Gene3D G3DSA:2.40.340.10 332 401 3.6E-142 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL543_04050 35a296dc6c61241f97d7f32277f1d66e 411 SUPERFAMILY SSF53218 181 325 2.62E-42 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily AL543_12280 5e74032692ba6b4f29e7754ff4e255a5 157 SUPERFAMILY SSF46557 2 75 3.27E-25 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 AL543_12280 5e74032692ba6b4f29e7754ff4e255a5 157 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 156 9.6E-27 T 11-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AL543_12280 5e74032692ba6b4f29e7754ff4e255a5 157 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 47 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AL543_12280 5e74032692ba6b4f29e7754ff4e255a5 157 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 32.191 T 11-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 AL543_12280 5e74032692ba6b4f29e7754ff4e255a5 157 SUPERFAMILY SSF54534 81 156 8.11E-24 T 11-10-2018 AL543_12280 5e74032692ba6b4f29e7754ff4e255a5 157 Pfam PF03449 Transcription elongation factor, N-terminal 4 73 1.5E-24 T 11-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AL543_12280 5e74032692ba6b4f29e7754ff4e255a5 157 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 154 1.6E-52 T 11-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 AL543_12280 5e74032692ba6b4f29e7754ff4e255a5 157 Gene3D G3DSA:3.10.50.30 75 157 2.4E-29 T 11-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 AL543_12280 5e74032692ba6b4f29e7754ff4e255a5 157 PIRSF PIRSF006092 1 157 2.5E-46 T 11-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AL543_12280 5e74032692ba6b4f29e7754ff4e255a5 157 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AL543_12280 5e74032692ba6b4f29e7754ff4e255a5 157 Gene3D G3DSA:1.10.287.180 1 74 6.8E-25 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 AL543_11165 50d68dcd94d236b5334fdc251106a3ba 357 SMART SM00028 200 233 290.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL543_11165 50d68dcd94d236b5334fdc251106a3ba 357 SMART SM00028 300 333 110.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL543_11165 50d68dcd94d236b5334fdc251106a3ba 357 SMART SM00028 166 199 12.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL543_11165 50d68dcd94d236b5334fdc251106a3ba 357 SMART SM00028 266 299 0.21 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL543_11165 50d68dcd94d236b5334fdc251106a3ba 357 SUPERFAMILY SSF48452 171 325 1.54E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_11165 50d68dcd94d236b5334fdc251106a3ba 357 Gene3D G3DSA:1.25.40.10 149 356 2.8E-20 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_11800 0639cf8ed1549351b666474cc294a40c 333 SUPERFAMILY SSF53850 22 330 3.86E-72 T 11-10-2018 AL543_11800 0639cf8ed1549351b666474cc294a40c 333 Gene3D G3DSA:3.40.190.10 30 299 1.8E-117 T 11-10-2018 AL543_11800 0639cf8ed1549351b666474cc294a40c 333 Gene3D G3DSA:3.40.190.10 117 329 1.8E-117 T 11-10-2018 AL543_11800 0639cf8ed1549351b666474cc294a40c 333 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 21 330 2.9E-136 T 11-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 AL543_11800 0639cf8ed1549351b666474cc294a40c 333 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 148 156 - T 11-10-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 AL543_11800 0639cf8ed1549351b666474cc294a40c 333 Pfam PF13531 Bacterial extracellular solute-binding protein 34 284 5.9E-39 T 11-10-2018 AL543_04910 ee0c7dcd0b1015512edb7c997406588d 222 SUPERFAMILY SSF52096 36 207 5.37E-21 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AL543_04910 ee0c7dcd0b1015512edb7c997406588d 222 Pfam PF00574 Clp protease 42 208 6.9E-12 T 11-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AL543_04910 ee0c7dcd0b1015512edb7c997406588d 222 Gene3D G3DSA:3.90.226.10 31 210 4.0E-29 T 11-10-2018 AL543_03465 51fdcf0e2007f7c225a1684180f9cec6 589 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 328 484 3.0E-39 T 11-10-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 AL543_03465 51fdcf0e2007f7c225a1684180f9cec6 589 Gene3D G3DSA:1.10.390.10 330 484 1.9E-46 T 11-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily AL543_03465 51fdcf0e2007f7c225a1684180f9cec6 589 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 337 348 6.0E-25 T 11-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 AL543_03465 51fdcf0e2007f7c225a1684180f9cec6 589 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 401 417 6.0E-25 T 11-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 AL543_03465 51fdcf0e2007f7c225a1684180f9cec6 589 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 280 300 6.0E-25 T 11-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 AL543_03465 51fdcf0e2007f7c225a1684180f9cec6 589 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 316 332 6.0E-25 T 11-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 AL543_03465 51fdcf0e2007f7c225a1684180f9cec6 589 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 178 325 7.7E-34 T 11-10-2018 IPR013856 Peptidase M4 domain GO:0004222 AL543_03465 51fdcf0e2007f7c225a1684180f9cec6 589 SUPERFAMILY SSF55486 177 484 2.93E-71 T 11-10-2018 AL543_03465 51fdcf0e2007f7c225a1684180f9cec6 589 Gene3D G3DSA:3.10.170.10 176 329 9.2E-35 T 11-10-2018 AL543_15680 8406d7346818242cbe1e816f8943b029 461 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 21 461 1.5E-141 T 11-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase AL543_15680 8406d7346818242cbe1e816f8943b029 461 PIRSF PIRSF028099 5 461 1.5E-182 T 11-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase AL543_15680 8406d7346818242cbe1e816f8943b029 461 Gene3D G3DSA:1.10.760.10 319 461 7.8E-9 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL543_15680 8406d7346818242cbe1e816f8943b029 461 SUPERFAMILY SSF46626 319 461 2.76E-22 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL543_08710 97d62690b520c4c53e200e8c506e70f6 329 Gene3D G3DSA:3.40.50.300 4 287 7.6E-27 T 11-10-2018 AL543_08710 97d62690b520c4c53e200e8c506e70f6 329 SUPERFAMILY SSF52540 26 174 5.65E-21 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_08710 97d62690b520c4c53e200e8c506e70f6 329 Pfam PF01926 50S ribosome-binding GTPase 42 165 6.3E-10 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AL543_06345 591804944707ee1b86fe4e825866856f 194 Pfam PF04542 Sigma-70 region 2 33 99 7.1E-17 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AL543_06345 591804944707ee1b86fe4e825866856f 194 Gene3D G3DSA:1.10.10.10 127 194 2.7E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_06345 591804944707ee1b86fe4e825866856f 194 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 28 187 1.2E-28 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AL543_06345 591804944707ee1b86fe4e825866856f 194 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 54 86 - T 11-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL543_06345 591804944707ee1b86fe4e825866856f 194 Pfam PF04545 Sigma-70, region 4 139 186 3.6E-13 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 AL543_06345 591804944707ee1b86fe4e825866856f 194 SUPERFAMILY SSF88659 127 187 6.17E-14 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AL543_06345 591804944707ee1b86fe4e825866856f 194 Gene3D G3DSA:1.10.1740.10 14 96 4.5E-24 T 11-10-2018 AL543_06345 591804944707ee1b86fe4e825866856f 194 SUPERFAMILY SSF88946 7 118 2.88E-25 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AL543_03405 5d913ef9ffc78106619488d4d2e8eee5 221 SUPERFAMILY SSF141371 117 219 7.98E-18 T 11-10-2018 AL543_03405 5d913ef9ffc78106619488d4d2e8eee5 221 Pfam PF07238 PilZ domain 115 205 6.5E-16 T 11-10-2018 IPR009875 PilZ domain GO:0035438 AL543_03405 5d913ef9ffc78106619488d4d2e8eee5 221 SUPERFAMILY SSF141371 12 115 2.28E-25 T 11-10-2018 AL543_03405 5d913ef9ffc78106619488d4d2e8eee5 221 Gene3D G3DSA:2.40.10.220 114 213 5.3E-8 T 11-10-2018 AL543_03405 5d913ef9ffc78106619488d4d2e8eee5 221 Pfam PF12945 Flagellar protein YcgR 16 106 7.5E-10 T 11-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal AL543_03405 5d913ef9ffc78106619488d4d2e8eee5 221 Gene3D G3DSA:2.30.110.10 5 113 3.0E-10 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AL543_10165 78e108d17815dd01e1b10a626d53d1f3 318 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 11 317 44.127 T 11-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 AL543_10165 78e108d17815dd01e1b10a626d53d1f3 318 PIRSF PIRSF026649 10 314 5.4E-79 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AL543_10165 78e108d17815dd01e1b10a626d53d1f3 318 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 13 305 2.5E-69 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AL543_10165 78e108d17815dd01e1b10a626d53d1f3 318 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 12 311 6.0E-125 T 11-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 AL543_16370 c3335a0473c35536e56bc87f3668d02d 313 Gene3D G3DSA:3.40.190.10 124 242 1.7E-59 T 11-10-2018 AL543_16370 c3335a0473c35536e56bc87f3668d02d 313 PIRSF PIRSF017082 1 312 1.3E-50 T 11-10-2018 IPR005064 Bordetella uptake gene GO:0030288 AL543_16370 c3335a0473c35536e56bc87f3668d02d 313 Gene3D G3DSA:3.40.190.150 28 307 1.7E-59 T 11-10-2018 AL543_16370 c3335a0473c35536e56bc87f3668d02d 313 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 48 309 5.2E-33 T 11-10-2018 IPR005064 Bordetella uptake gene GO:0030288 AL543_03550 8f526908b306cb7b64b93614d13acf38 217 Pfam PF07947 YhhN family 36 215 2.7E-47 T 11-10-2018 IPR012506 YhhN-like GO:0016021 AL543_13630 5adf31c005e261859415eb0a6dfd2971 281 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 21 130 2.0E-49 T 11-10-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AL543_13630 5adf31c005e261859415eb0a6dfd2971 281 Pfam PF14489 QueF-like protein 194 269 1.3E-26 T 11-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AL543_13630 5adf31c005e261859415eb0a6dfd2971 281 SUPERFAMILY SSF55620 184 264 6.0E-10 T 11-10-2018 AL543_13630 5adf31c005e261859415eb0a6dfd2971 281 Gene3D G3DSA:3.30.1130.10 21 138 2.3E-47 T 11-10-2018 AL543_13630 5adf31c005e261859415eb0a6dfd2971 281 PIRSF PIRSF004750 6 281 7.7E-130 T 11-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AL543_13630 5adf31c005e261859415eb0a6dfd2971 281 TIGRFAM TIGR03138 QueF: queuine synthase 11 281 1.3E-129 T 11-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AL543_13630 5adf31c005e261859415eb0a6dfd2971 281 Gene3D G3DSA:3.30.1130.10 143 281 3.7E-63 T 11-10-2018 AL543_13630 5adf31c005e261859415eb0a6dfd2971 281 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 281 163.044 T 11-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AL543_11355 bfa7a223fe5dcf0e149327bbbfcd5a6c 311 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 311 1.3E-128 T 11-10-2018 IPR010097 Malate dehydrogenase, type 1 GO:0006099|GO:0030060 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263|Reactome: R-HSA-71403 AL543_11355 bfa7a223fe5dcf0e149327bbbfcd5a6c 311 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 310 6.9E-48 T 11-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 AL543_11355 bfa7a223fe5dcf0e149327bbbfcd5a6c 311 SUPERFAMILY SSF51735 1 145 4.36E-39 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_11355 bfa7a223fe5dcf0e149327bbbfcd5a6c 311 Gene3D G3DSA:3.40.50.720 1 146 2.8E-65 T 11-10-2018 AL543_11355 bfa7a223fe5dcf0e149327bbbfcd5a6c 311 PIRSF PIRSF000102 1 308 1.0E-61 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AL543_11355 bfa7a223fe5dcf0e149327bbbfcd5a6c 311 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 11-10-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 AL543_11355 bfa7a223fe5dcf0e149327bbbfcd5a6c 311 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 9.1E-47 T 11-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 AL543_11355 bfa7a223fe5dcf0e149327bbbfcd5a6c 311 SUPERFAMILY SSF56327 146 310 3.71E-42 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AL543_11355 bfa7a223fe5dcf0e149327bbbfcd5a6c 311 Gene3D G3DSA:3.90.110.10 147 311 2.1E-53 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AL543_11355 bfa7a223fe5dcf0e149327bbbfcd5a6c 311 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 311 57.513 T 11-10-2018 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 AL543_12085 b2a14bddfff28e62cbb175bb66368b33 264 PIRSF PIRSF000388 1 264 2.3E-101 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AL543_12085 b2a14bddfff28e62cbb175bb66368b33 264 Gene3D G3DSA:3.20.20.60 1 262 6.3E-106 T 11-10-2018 AL543_12085 b2a14bddfff28e62cbb175bb66368b33 264 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 258 6.9E-108 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AL543_12085 b2a14bddfff28e62cbb175bb66368b33 264 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 263 41.35 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AL543_12085 b2a14bddfff28e62cbb175bb66368b33 264 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 261 1.4E-112 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AL543_12085 b2a14bddfff28e62cbb175bb66368b33 264 SUPERFAMILY SSF51621 3 262 4.32E-105 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AL543_16625 3d98db513e681925dba0c3405da3bc0b 158 Pfam PF05751 FixH 7 147 9.1E-43 T 11-10-2018 IPR008620 Nitrogen fixation protein FixH AL543_08680 ffea6da27f0fb02a11b62f4d3e3de0c2 265 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 74 82 - T 11-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL543_08680 ffea6da27f0fb02a11b62f4d3e3de0c2 265 Hamap MF_00258 Glutamate racemase [murI]. 7 254 33.639 T 11-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL543_08680 ffea6da27f0fb02a11b62f4d3e3de0c2 265 TIGRFAM TIGR00067 glut_race: glutamate racemase 9 224 1.4E-70 T 11-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL543_08680 ffea6da27f0fb02a11b62f4d3e3de0c2 265 SUPERFAMILY SSF53681 112 260 8.01E-35 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL543_08680 ffea6da27f0fb02a11b62f4d3e3de0c2 265 SUPERFAMILY SSF53681 8 108 1.18E-29 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL543_08680 ffea6da27f0fb02a11b62f4d3e3de0c2 265 Gene3D G3DSA:3.40.50.1860 99 208 4.3E-83 T 11-10-2018 AL543_08680 ffea6da27f0fb02a11b62f4d3e3de0c2 265 Pfam PF01177 Asp/Glu/Hydantoin racemase 11 215 9.8E-27 T 11-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL543_08680 ffea6da27f0fb02a11b62f4d3e3de0c2 265 Gene3D G3DSA:3.40.50.1860 11 233 4.3E-83 T 11-10-2018 AL543_14850 84e27338aa43e253e4e9f90a09b8d9a0 449 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 54 159 7.7E-17 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL543_14850 84e27338aa43e253e4e9f90a09b8d9a0 449 SUPERFAMILY SSF52540 11 235 1.25E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_14850 84e27338aa43e253e4e9f90a09b8d9a0 449 Pfam PF16193 AAA C-terminal domain 192 268 6.5E-20 T 11-10-2018 IPR032423 AAA C-terminal domain AL543_14850 84e27338aa43e253e4e9f90a09b8d9a0 449 SMART SM00382 50 166 9.5E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_14850 84e27338aa43e253e4e9f90a09b8d9a0 449 Gene3D G3DSA:1.10.3710.10 347 448 1.8E-37 T 11-10-2018 AL543_14850 84e27338aa43e253e4e9f90a09b8d9a0 449 Gene3D G3DSA:3.40.50.300 2 165 1.3E-48 T 11-10-2018 AL543_14850 84e27338aa43e253e4e9f90a09b8d9a0 449 SUPERFAMILY SSF48019 253 435 5.33E-72 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AL543_14850 84e27338aa43e253e4e9f90a09b8d9a0 449 Pfam PF12002 MgsA AAA+ ATPase C terminal 269 435 1.5E-66 T 11-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal AL543_14850 84e27338aa43e253e4e9f90a09b8d9a0 449 Gene3D G3DSA:1.10.8.60 166 241 1.2E-24 T 11-10-2018 AL543_14850 84e27338aa43e253e4e9f90a09b8d9a0 449 Gene3D G3DSA:1.20.272.10 242 346 4.0E-43 T 11-10-2018 AL543_07685 a43efd95af08bb773d0ec2f1288e5b94 460 SUPERFAMILY SSF52540 73 354 3.83E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_07685 a43efd95af08bb773d0ec2f1288e5b94 460 Pfam PF00270 DEAD/DEAH box helicase 28 194 1.7E-46 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL543_07685 a43efd95af08bb773d0ec2f1288e5b94 460 Gene3D G3DSA:3.40.50.300 2 210 7.2E-74 T 11-10-2018 AL543_07685 a43efd95af08bb773d0ec2f1288e5b94 460 Gene3D G3DSA:3.30.70.330 386 459 1.5E-18 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily AL543_07685 a43efd95af08bb773d0ec2f1288e5b94 460 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AL543_07685 a43efd95af08bb773d0ec2f1288e5b94 460 Pfam PF00271 Helicase conserved C-terminal domain 232 338 3.7E-28 T 11-10-2018 IPR001650 Helicase, C-terminal AL543_07685 a43efd95af08bb773d0ec2f1288e5b94 460 SMART SM00487 23 220 1.8E-54 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL543_07685 a43efd95af08bb773d0ec2f1288e5b94 460 SMART SM00490 257 338 4.7E-30 T 11-10-2018 IPR001650 Helicase, C-terminal AL543_07685 a43efd95af08bb773d0ec2f1288e5b94 460 Gene3D G3DSA:3.40.50.300 211 371 2.1E-46 T 11-10-2018 AL543_07685 a43efd95af08bb773d0ec2f1288e5b94 460 Pfam PF03880 DbpA RNA binding domain 387 457 1.1E-22 T 11-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain AL543_01175 6ca7dbf43532733b9b14cc705ed26df6 99 Gene3D G3DSA:3.30.750.24 2 99 4.9E-17 T 11-10-2018 IPR036513 STAS domain superfamily AL543_01175 6ca7dbf43532733b9b14cc705ed26df6 99 SUPERFAMILY SSF52091 6 98 1.51E-19 T 11-10-2018 IPR036513 STAS domain superfamily AL543_01175 6ca7dbf43532733b9b14cc705ed26df6 99 Pfam PF01740 STAS domain 15 96 3.0E-9 T 11-10-2018 IPR002645 STAS domain AL543_06675 3d4dc73d9740d08cd45b85ab2053f409 1530 Gene3D G3DSA:3.20.20.70 514 1220 0.0 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_06675 3d4dc73d9740d08cd45b85ab2053f409 1530 Pfam PF04898 Glutamate synthase central domain 488 772 3.7E-116 T 11-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 AL543_06675 3d4dc73d9740d08cd45b85ab2053f409 1530 Pfam PF01645 Conserved region in glutamate synthase 833 1203 3.0E-152 T 11-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 AL543_06675 3d4dc73d9740d08cd45b85ab2053f409 1530 Gene3D G3DSA:2.160.20.60 1255 1526 3.3E-109 T 11-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 AL543_06675 3d4dc73d9740d08cd45b85ab2053f409 1530 Gene3D G3DSA:3.20.20.70 464 831 0.0 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_06675 3d4dc73d9740d08cd45b85ab2053f409 1530 Pfam PF00310 Glutamine amidotransferases class-II 37 459 6.6E-185 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain AL543_06675 3d4dc73d9740d08cd45b85ab2053f409 1530 SUPERFAMILY SSF69336 1251 1514 1.57E-93 T 11-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 AL543_06675 3d4dc73d9740d08cd45b85ab2053f409 1530 Pfam PF01493 GXGXG motif 1283 1468 3.5E-82 T 11-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 AL543_06675 3d4dc73d9740d08cd45b85ab2053f409 1530 SUPERFAMILY SSF56235 37 463 4.01E-152 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL543_06675 3d4dc73d9740d08cd45b85ab2053f409 1530 SUPERFAMILY SSF51395 477 1236 1.03E-270 T 11-10-2018 AL543_06675 3d4dc73d9740d08cd45b85ab2053f409 1530 Gene3D G3DSA:3.60.20.10 37 576 0.0 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL543_08310 24da21ddc086cfd0ffbc88e99738a438 158 Pfam PF00588 SpoU rRNA Methylase family 3 145 2.9E-34 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AL543_08310 24da21ddc086cfd0ffbc88e99738a438 158 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 156 4.5E-58 T 11-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 AL543_08310 24da21ddc086cfd0ffbc88e99738a438 158 PIRSF PIRSF029256 1 158 5.0E-66 T 11-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 AL543_08310 24da21ddc086cfd0ffbc88e99738a438 158 SUPERFAMILY SSF75217 2 156 4.12E-43 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AL543_08310 24da21ddc086cfd0ffbc88e99738a438 158 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 155 32.592 T 11-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 AL543_08310 24da21ddc086cfd0ffbc88e99738a438 158 Gene3D G3DSA:3.40.1280.10 1 158 2.6E-63 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL543_14355 838a754be9053a5f4dc1e94afe6cbc70 708 SUPERFAMILY SSF48179 615 707 2.21E-26 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AL543_14355 838a754be9053a5f4dc1e94afe6cbc70 708 Gene3D G3DSA:1.10.1040.50 500 701 2.3E-71 T 11-10-2018 AL543_14355 838a754be9053a5f4dc1e94afe6cbc70 708 Pfam PF00378 Enoyl-CoA hydratase/isomerase 26 227 7.4E-38 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AL543_14355 838a754be9053a5f4dc1e94afe6cbc70 708 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 AL543_14355 838a754be9053a5f4dc1e94afe6cbc70 708 SUPERFAMILY SSF48179 497 606 1.19E-27 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AL543_14355 838a754be9053a5f4dc1e94afe6cbc70 708 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 494 519 - T 11-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AL543_14355 838a754be9053a5f4dc1e94afe6cbc70 708 Gene3D G3DSA:3.40.50.720 306 499 8.6E-60 T 11-10-2018 AL543_14355 838a754be9053a5f4dc1e94afe6cbc70 708 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 590 1.9E-24 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AL543_14355 838a754be9053a5f4dc1e94afe6cbc70 708 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 619 694 8.0E-6 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AL543_14355 838a754be9053a5f4dc1e94afe6cbc70 708 SUPERFAMILY SSF52096 5 305 3.7E-67 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AL543_14355 838a754be9053a5f4dc1e94afe6cbc70 708 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 6 707 0.0 T 11-10-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AL543_14355 838a754be9053a5f4dc1e94afe6cbc70 708 Hamap MF_01617 Fatty acid oxidation complex subunit alpha [fadJ]. 1 707 52.13 T 11-10-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AL543_14355 838a754be9053a5f4dc1e94afe6cbc70 708 Gene3D G3DSA:3.90.226.10 1 305 1.8E-95 T 11-10-2018 AL543_14355 838a754be9053a5f4dc1e94afe6cbc70 708 SUPERFAMILY SSF51735 313 495 5.02E-47 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_14355 838a754be9053a5f4dc1e94afe6cbc70 708 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 316 495 1.8E-54 T 11-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AL543_08555 6ea58dac9c6ce08014e791985b86ecb4 176 SUPERFAMILY SSF52540 3 172 3.7E-15 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_08555 6ea58dac9c6ce08014e791985b86ecb4 176 Gene3D G3DSA:3.40.50.300 2 168 3.4E-10 T 11-10-2018 AL543_08555 6ea58dac9c6ce08014e791985b86ecb4 176 Pfam PF13521 AAA domain 4 164 6.0E-38 T 11-10-2018 IPR038727 NadR/Ttd14, AAA domain AL543_15620 8a600d6e15097582f50eb16203cc74f1 644 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 314 333 6.2E-75 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL543_15620 8a600d6e15097582f50eb16203cc74f1 644 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 214 240 6.2E-75 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL543_15620 8a600d6e15097582f50eb16203cc74f1 644 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 163 185 6.2E-75 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL543_15620 8a600d6e15097582f50eb16203cc74f1 644 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 248 268 6.2E-75 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL543_15620 8a600d6e15097582f50eb16203cc74f1 644 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 278 298 6.2E-75 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL543_15620 8a600d6e15097582f50eb16203cc74f1 644 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 136 153 6.2E-75 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL543_15620 8a600d6e15097582f50eb16203cc74f1 644 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 85 111 6.2E-75 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL543_15620 8a600d6e15097582f50eb16203cc74f1 644 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 298 314 6.2E-75 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL543_15620 8a600d6e15097582f50eb16203cc74f1 644 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 319 627 1.2E-52 T 11-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal AL543_15620 8a600d6e15097582f50eb16203cc74f1 644 Pfam PF01578 Cytochrome C assembly protein 94 299 1.2E-42 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AL543_15620 8a600d6e15097582f50eb16203cc74f1 644 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 193 208 6.8E-7 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL543_15620 8a600d6e15097582f50eb16203cc74f1 644 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 3 27 6.8E-7 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL543_15620 8a600d6e15097582f50eb16203cc74f1 644 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 320 335 6.8E-7 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL543_15620 8a600d6e15097582f50eb16203cc74f1 644 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 117 140 6.8E-7 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL543_15620 8a600d6e15097582f50eb16203cc74f1 644 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 355 372 6.8E-7 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL543_15620 8a600d6e15097582f50eb16203cc74f1 644 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 58 630 1.4E-172 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL543_16555 b67ccc07b1398691671fdedc975501b4 343 PIRSF PIRSF019574 1 343 3.0E-109 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL543_16555 b67ccc07b1398691671fdedc975501b4 343 Gene3D G3DSA:3.40.190.10 131 315 5.1E-108 T 11-10-2018 AL543_16555 b67ccc07b1398691671fdedc975501b4 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 91 104 1.2E-70 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL543_16555 b67ccc07b1398691671fdedc975501b4 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 75 89 1.2E-70 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL543_16555 b67ccc07b1398691671fdedc975501b4 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 148 162 1.2E-70 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL543_16555 b67ccc07b1398691671fdedc975501b4 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 166 185 1.2E-70 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL543_16555 b67ccc07b1398691671fdedc975501b4 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 122 138 1.2E-70 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL543_16555 b67ccc07b1398691671fdedc975501b4 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 203 222 1.2E-70 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL543_16555 b67ccc07b1398691671fdedc975501b4 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 247 266 1.2E-70 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL543_16555 b67ccc07b1398691671fdedc975501b4 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 32 48 1.2E-70 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL543_16555 b67ccc07b1398691671fdedc975501b4 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 48 69 1.2E-70 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL543_16555 b67ccc07b1398691671fdedc975501b4 343 Gene3D G3DSA:3.40.190.10 31 310 5.1E-108 T 11-10-2018 AL543_16555 b67ccc07b1398691671fdedc975501b4 343 Pfam PF13416 Bacterial extracellular solute-binding protein 42 301 8.8E-38 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein AL543_16555 b67ccc07b1398691671fdedc975501b4 343 SUPERFAMILY SSF53850 26 330 1.13E-86 T 11-10-2018 AL543_13220 ba4990a7def5d948885ed4f0007f512b 528 SUPERFAMILY SSF141868 258 500 1.01E-76 T 11-10-2018 IPR035919 EAL domain superfamily AL543_13220 ba4990a7def5d948885ed4f0007f512b 528 SMART SM00052 251 495 3.1E-99 T 11-10-2018 IPR001633 EAL domain AL543_13220 ba4990a7def5d948885ed4f0007f512b 528 Pfam PF00563 EAL domain 258 490 4.8E-66 T 11-10-2018 IPR001633 EAL domain AL543_13220 ba4990a7def5d948885ed4f0007f512b 528 Gene3D G3DSA:3.20.20.450 252 502 4.0E-83 T 11-10-2018 IPR035919 EAL domain superfamily AL543_13220 ba4990a7def5d948885ed4f0007f512b 528 Pfam PF12792 CSS motif domain associated with EAL 53 224 5.3E-17 T 11-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain AL543_03240 38768a6acd0ff0061c0ab063e9e921bf 229 SUPERFAMILY SSF161098 10 202 2.35E-37 T 11-10-2018 IPR035906 MetI-like superfamily AL543_03240 38768a6acd0ff0061c0ab063e9e921bf 229 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 111 3.4E-17 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 AL543_03240 38768a6acd0ff0061c0ab063e9e921bf 229 Gene3D G3DSA:1.10.3720.10 2 218 1.4E-46 T 11-10-2018 IPR035906 MetI-like superfamily AL543_03240 38768a6acd0ff0061c0ab063e9e921bf 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 216 5.4E-19 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL543_07075 4d26c5a4646ff60c6545e74016d71997 440 SUPERFAMILY SSF53335 76 438 6.87E-79 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL543_07075 4d26c5a4646ff60c6545e74016d71997 440 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 100 438 4.3E-33 T 11-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 AL543_07075 4d26c5a4646ff60c6545e74016d71997 440 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 421 431 - T 11-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site AL543_07075 4d26c5a4646ff60c6545e74016d71997 440 Gene3D G3DSA:2.40.50.140 1 88 1.9E-29 T 11-10-2018 AL543_07075 4d26c5a4646ff60c6545e74016d71997 440 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 25 431 4.7E-129 T 11-10-2018 AL543_07075 4d26c5a4646ff60c6545e74016d71997 440 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 19 439 66.654 T 11-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 AL543_07075 4d26c5a4646ff60c6545e74016d71997 440 Gene3D G3DSA:3.40.50.150 89 433 2.5E-115 T 11-10-2018 AL543_07075 4d26c5a4646ff60c6545e74016d71997 440 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 370 400 - T 11-10-2018 IPR030390 RNA methyltransferase TrmA, active site AL543_07075 4d26c5a4646ff60c6545e74016d71997 440 SUPERFAMILY SSF50249 17 74 4.85E-14 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL543_07075 4d26c5a4646ff60c6545e74016d71997 440 Gene3D G3DSA:3.40.1350.30 135 271 2.5E-115 T 11-10-2018 AL543_07075 4d26c5a4646ff60c6545e74016d71997 440 Pfam PF01938 TRAM domain 17 68 9.9E-11 T 11-10-2018 IPR002792 TRAM domain AL543_12585 a8ade89f974539ae6d084a90204b0c74 330 Gene3D G3DSA:3.20.20.300 1 330 2.8E-137 T 11-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 AL543_12585 a8ade89f974539ae6d084a90204b0c74 330 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 3 326 46.52 T 11-10-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 AL543_12585 a8ade89f974539ae6d084a90204b0c74 330 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 228 245 - T 11-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 AL543_12585 a8ade89f974539ae6d084a90204b0c74 330 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 12 283 2.4E-82 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AL543_12585 a8ade89f974539ae6d084a90204b0c74 330 SUPERFAMILY SSF51445 2 286 1.68E-87 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AL543_14020 92c9fb67e41e5ce384e5755bfa4eb6e3 306 Gene3D G3DSA:3.30.479.30 50 182 1.3E-43 T 11-10-2018 AL543_14020 92c9fb67e41e5ce384e5755bfa4eb6e3 306 Pfam PF01145 SPFH domain / Band 7 family 26 195 6.6E-34 T 11-10-2018 IPR001107 Band 7 domain AL543_14020 92c9fb67e41e5ce384e5755bfa4eb6e3 306 Pfam PF16200 C-terminal region of band_7 241 303 2.9E-7 T 11-10-2018 IPR032435 Band 7, C-terminal extension Reactome: R-HSA-8949664 AL543_14020 92c9fb67e41e5ce384e5755bfa4eb6e3 306 SMART SM00244 22 180 2.4E-60 T 11-10-2018 IPR001107 Band 7 domain AL543_14020 92c9fb67e41e5ce384e5755bfa4eb6e3 306 PRINTS PR00721 Stomatin signature 132 155 5.8E-29 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AL543_14020 92c9fb67e41e5ce384e5755bfa4eb6e3 306 PRINTS PR00721 Stomatin signature 156 174 5.8E-29 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AL543_14020 92c9fb67e41e5ce384e5755bfa4eb6e3 306 PRINTS PR00721 Stomatin signature 175 196 5.8E-29 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AL543_14020 92c9fb67e41e5ce384e5755bfa4eb6e3 306 PRINTS PR00721 Stomatin signature 77 98 5.8E-29 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AL543_14020 92c9fb67e41e5ce384e5755bfa4eb6e3 306 PRINTS PR00721 Stomatin signature 112 129 5.8E-29 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AL543_14020 92c9fb67e41e5ce384e5755bfa4eb6e3 306 SUPERFAMILY SSF117892 53 187 3.66E-42 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily AL543_14020 92c9fb67e41e5ce384e5755bfa4eb6e3 306 ProSitePatterns PS01270 Band 7 protein family signature. 136 164 - T 11-10-2018 IPR018080 Band 7/stomatin-like, conserved site AL543_01045 7190e33ab2acab5550e1b13442d6c0e3 720 SUPERFAMILY SSF52172 1 108 6.46E-33 T 11-10-2018 IPR011006 CheY-like superfamily AL543_01045 7190e33ab2acab5550e1b13442d6c0e3 720 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 576 704 1.0E-47 T 11-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AL543_01045 7190e33ab2acab5550e1b13442d6c0e3 720 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 4 103 1.3E-21 T 11-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 AL543_01045 7190e33ab2acab5550e1b13442d6c0e3 720 TIGRFAM TIGR04301 ODC_inducible: ornithine decarboxylase SpeF 1 719 0.0 T 11-10-2018 IPR027568 Ornithine decarboxylase SpeF GO:0004586 KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 AL543_01045 7190e33ab2acab5550e1b13442d6c0e3 720 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 109 551 2.0E-192 T 11-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AL543_01045 7190e33ab2acab5550e1b13442d6c0e3 720 SUPERFAMILY SSF53383 109 566 6.95E-126 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL543_01045 7190e33ab2acab5550e1b13442d6c0e3 720 Gene3D G3DSA:3.90.1150.10 421 600 8.8E-73 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL543_01045 7190e33ab2acab5550e1b13442d6c0e3 720 PIRSF PIRSF009393 1 720 3.8E-296 T 11-10-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 AL543_01045 7190e33ab2acab5550e1b13442d6c0e3 720 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 350 364 - T 11-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AL543_01045 7190e33ab2acab5550e1b13442d6c0e3 720 Gene3D G3DSA:3.90.100.10 601 720 3.7E-43 T 11-10-2018 AL543_01045 7190e33ab2acab5550e1b13442d6c0e3 720 SUPERFAMILY SSF55904 571 719 6.02E-47 T 11-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 AL543_01045 7190e33ab2acab5550e1b13442d6c0e3 720 Gene3D G3DSA:3.40.640.10 109 419 2.7E-85 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL543_01045 7190e33ab2acab5550e1b13442d6c0e3 720 Gene3D G3DSA:3.40.50.220 1 108 1.3E-21 T 11-10-2018 IPR027464 Ornithine decarboxylase, N-terminal KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 AL543_09865 42d44604774a3501d23fc86d45cb3401 1036 Gene3D G3DSA:3.30.2090.10 178 268 2.0E-288 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL543_09865 42d44604774a3501d23fc86d45cb3401 1036 Pfam PF00873 AcrB/AcrD/AcrF family 4 1003 6.1E-276 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_09865 42d44604774a3501d23fc86d45cb3401 1036 Gene3D G3DSA:1.20.1640.10 501 1001 2.0E-288 T 11-10-2018 AL543_09865 42d44604774a3501d23fc86d45cb3401 1036 SUPERFAMILY SSF82693 41 130 8.72E-25 T 11-10-2018 AL543_09865 42d44604774a3501d23fc86d45cb3401 1036 SUPERFAMILY SSF82714 182 263 4.05E-16 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL543_09865 42d44604774a3501d23fc86d45cb3401 1036 SUPERFAMILY SSF82866 782 1008 4.32E-47 T 11-10-2018 AL543_09865 42d44604774a3501d23fc86d45cb3401 1036 SUPERFAMILY SSF82714 701 783 4.97E-18 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL543_09865 42d44604774a3501d23fc86d45cb3401 1036 Gene3D G3DSA:3.30.70.1430 555 647 2.0E-288 T 11-10-2018 AL543_09865 42d44604774a3501d23fc86d45cb3401 1036 Gene3D G3DSA:3.30.2090.10 698 786 2.0E-288 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL543_09865 42d44604774a3501d23fc86d45cb3401 1036 SUPERFAMILY SSF82693 136 323 1.57E-20 T 11-10-2018 AL543_09865 42d44604774a3501d23fc86d45cb3401 1036 Gene3D G3DSA:1.20.1640.10 10 500 2.0E-288 T 11-10-2018 AL543_09865 42d44604774a3501d23fc86d45cb3401 1036 SUPERFAMILY SSF82866 290 489 4.19E-47 T 11-10-2018 AL543_09865 42d44604774a3501d23fc86d45cb3401 1036 Gene3D G3DSA:3.30.70.1430 40 794 2.0E-288 T 11-10-2018 AL543_09865 42d44604774a3501d23fc86d45cb3401 1036 SUPERFAMILY SSF82693 553 650 6.28E-20 T 11-10-2018 AL543_09865 42d44604774a3501d23fc86d45cb3401 1036 Gene3D G3DSA:3.30.70.1320 134 325 2.0E-288 T 11-10-2018 AL543_09865 42d44604774a3501d23fc86d45cb3401 1036 Gene3D G3DSA:3.30.70.1440 648 843 2.0E-288 T 11-10-2018 AL543_09865 42d44604774a3501d23fc86d45cb3401 1036 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 1.6E-73 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_09865 42d44604774a3501d23fc86d45cb3401 1036 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 1.6E-73 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_09865 42d44604774a3501d23fc86d45cb3401 1036 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 1.6E-73 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_09865 42d44604774a3501d23fc86d45cb3401 1036 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 1.6E-73 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_09865 42d44604774a3501d23fc86d45cb3401 1036 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.6E-73 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_09865 42d44604774a3501d23fc86d45cb3401 1036 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.6E-73 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_09865 42d44604774a3501d23fc86d45cb3401 1036 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 1.6E-73 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_09865 42d44604774a3501d23fc86d45cb3401 1036 PRINTS PR00702 Acriflavin resistance protein family signature 603 617 1.6E-73 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_09865 42d44604774a3501d23fc86d45cb3401 1036 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 1.6E-73 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_13665 c931d85862138322e51b17c21b7c9827 316 Gene3D G3DSA:3.40.50.2300 163 279 3.9E-67 T 11-10-2018 AL543_13665 c931d85862138322e51b17c21b7c9827 316 Pfam PF13377 Periplasmic binding protein-like domain 168 305 2.0E-21 T 11-10-2018 AL543_13665 c931d85862138322e51b17c21b7c9827 316 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 11-10-2018 AL543_13665 c931d85862138322e51b17c21b7c9827 316 Gene3D G3DSA:1.10.260.40 3 60 8.9E-20 T 11-10-2018 AL543_13665 c931d85862138322e51b17c21b7c9827 316 SUPERFAMILY SSF53822 63 304 4.12E-60 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AL543_13665 c931d85862138322e51b17c21b7c9827 316 Gene3D G3DSA:3.40.50.2300 68 301 3.9E-67 T 11-10-2018 AL543_13665 c931d85862138322e51b17c21b7c9827 316 TIGRFAM TIGR02405 trehalos_R_Ecol: trehalose operon repressor 4 305 8.2E-137 T 11-10-2018 IPR012771 Trehalose operon repressor GO:0003677|GO:0005991|GO:0045892 AL543_13665 c931d85862138322e51b17c21b7c9827 316 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 2.8E-18 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL543_13665 c931d85862138322e51b17c21b7c9827 316 SUPERFAMILY SSF47413 3 60 3.24E-15 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL543_13665 c931d85862138322e51b17c21b7c9827 316 SMART SM00354 4 74 6.8E-29 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL543_05895 9751a3f3f9cbffba666d3258cfd56225 324 Gene3D G3DSA:3.40.190.10 111 318 1.1E-37 T 11-10-2018 AL543_05895 9751a3f3f9cbffba666d3258cfd56225 324 SUPERFAMILY SSF46785 25 107 4.01E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_05895 9751a3f3f9cbffba666d3258cfd56225 324 Pfam PF03466 LysR substrate binding domain 114 322 9.9E-18 T 11-10-2018 IPR005119 LysR, substrate-binding AL543_05895 9751a3f3f9cbffba666d3258cfd56225 324 Gene3D G3DSA:1.10.10.10 21 108 7.9E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_05895 9751a3f3f9cbffba666d3258cfd56225 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 30 87 4.2E-12 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_05895 9751a3f3f9cbffba666d3258cfd56225 324 Gene3D G3DSA:3.40.190.10 196 294 1.1E-37 T 11-10-2018 AL543_05895 9751a3f3f9cbffba666d3258cfd56225 324 SUPERFAMILY SSF53850 111 320 5.12E-35 T 11-10-2018 AL543_07610 e4f5ebe0aed8e159ddc79a601443263f 582 Pfam PF17243 POTRA domain TamA domain 1 35 106 3.3E-20 T 11-10-2018 IPR035243 TamA, POTRA domain 1 AL543_07610 e4f5ebe0aed8e159ddc79a601443263f 582 Gene3D G3DSA:3.10.20.310 31 107 1.4E-22 T 11-10-2018 AL543_07610 e4f5ebe0aed8e159ddc79a601443263f 582 Gene3D G3DSA:3.10.20.310 110 195 1.3E-23 T 11-10-2018 AL543_07610 e4f5ebe0aed8e159ddc79a601443263f 582 Gene3D G3DSA:2.40.160.50 273 582 2.3E-97 T 11-10-2018 AL543_07610 e4f5ebe0aed8e159ddc79a601443263f 582 Pfam PF01103 Surface antigen 285 579 6.3E-28 T 11-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 AL543_07610 e4f5ebe0aed8e159ddc79a601443263f 582 Gene3D G3DSA:3.10.20.310 196 272 4.0E-19 T 11-10-2018 AL543_03570 a1f0e236500cc2e0cfec02cd72ad71fb 628 Gene3D G3DSA:3.30.450.20 331 463 5.8E-26 T 11-10-2018 AL543_03570 a1f0e236500cc2e0cfec02cd72ad71fb 628 SUPERFAMILY SSF103190 39 205 5.57E-33 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily AL543_03570 a1f0e236500cc2e0cfec02cd72ad71fb 628 SUPERFAMILY SSF55073 470 618 7.85E-39 T 11-10-2018 IPR029787 Nucleotide cyclase AL543_03570 a1f0e236500cc2e0cfec02cd72ad71fb 628 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 344 461 3.8E-16 T 11-10-2018 IPR000014 PAS domain AL543_03570 a1f0e236500cc2e0cfec02cd72ad71fb 628 SMART SM00267 454 619 9.7E-48 T 11-10-2018 IPR000160 GGDEF domain AL543_03570 a1f0e236500cc2e0cfec02cd72ad71fb 628 SMART SM00086 412 454 3.3E-5 T 11-10-2018 IPR001610 PAC motif AL543_03570 a1f0e236500cc2e0cfec02cd72ad71fb 628 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 463 618 9.6E-39 T 11-10-2018 IPR000160 GGDEF domain AL543_03570 a1f0e236500cc2e0cfec02cd72ad71fb 628 Pfam PF13426 PAS domain 352 452 3.7E-12 T 11-10-2018 IPR000014 PAS domain AL543_03570 a1f0e236500cc2e0cfec02cd72ad71fb 628 Gene3D G3DSA:3.30.450.20 77 205 5.6E-11 T 11-10-2018 AL543_03570 a1f0e236500cc2e0cfec02cd72ad71fb 628 Gene3D G3DSA:3.30.70.270 464 627 2.1E-46 T 11-10-2018 AL543_03570 a1f0e236500cc2e0cfec02cd72ad71fb 628 Pfam PF00990 Diguanylate cyclase, GGDEF domain 467 615 6.8E-35 T 11-10-2018 IPR000160 GGDEF domain AL543_03570 a1f0e236500cc2e0cfec02cd72ad71fb 628 SUPERFAMILY SSF55785 352 463 2.42E-21 T 11-10-2018 IPR035965 PAS domain superfamily AL543_03570 a1f0e236500cc2e0cfec02cd72ad71fb 628 SUPERFAMILY SSF103190 206 298 6.36E-14 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily AL543_18865 f7a5c163f64ea024c73d2dd5d7436d55 103 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 41 102 1.7E-25 T 11-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain AL543_18865 f7a5c163f64ea024c73d2dd5d7436d55 103 Pfam PF12836 Helix-hairpin-helix motif 41 101 4.8E-22 T 11-10-2018 AL543_18865 f7a5c163f64ea024c73d2dd5d7436d55 103 SMART SM00278 51 70 13.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AL543_18865 f7a5c163f64ea024c73d2dd5d7436d55 103 SMART SM00278 81 100 22.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AL543_18865 f7a5c163f64ea024c73d2dd5d7436d55 103 Gene3D G3DSA:1.10.150.280 28 103 1.9E-23 T 11-10-2018 AL543_18865 f7a5c163f64ea024c73d2dd5d7436d55 103 SUPERFAMILY SSF47781 27 101 3.67E-28 T 11-10-2018 IPR010994 RuvA domain 2-like AL543_07035 a400d66ee92952945b74e05c3ed8d620 462 SUPERFAMILY SSF53383 3 460 2.91E-126 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL543_07035 a400d66ee92952945b74e05c3ed8d620 462 PIRSF PIRSF001386 1 461 8.0E-202 T 11-10-2018 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1 AL543_07035 a400d66ee92952945b74e05c3ed8d620 462 TIGRFAM TIGR02618 tyr_phenol_ly: tyrosine phenol-lyase 6 458 3.5E-241 T 11-10-2018 IPR013441 Tyrosine phenol-lyase GO:0006570|GO:0050371 KEGG: 00350+4.1.99.2 AL543_07035 a400d66ee92952945b74e05c3ed8d620 462 Gene3D G3DSA:3.90.1150.10 7 454 1.5E-200 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL543_07035 a400d66ee92952945b74e05c3ed8d620 462 Gene3D G3DSA:3.40.640.10 59 314 1.5E-200 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL543_07035 a400d66ee92952945b74e05c3ed8d620 462 Hamap MF_00543 Tyrosine phenol-lyase [tpl]. 2 460 76.116 T 11-10-2018 IPR013441 Tyrosine phenol-lyase GO:0006570|GO:0050371 KEGG: 00350+4.1.99.2 AL543_07035 a400d66ee92952945b74e05c3ed8d620 462 Pfam PF01212 Beta-eliminating lyase 47 426 5.0E-87 T 11-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 AL543_11815 f61d6c24d07b3b9af71d5a3ddca5c234 376 Gene3D G3DSA:3.40.50.300 2 292 2.3E-79 T 11-10-2018 AL543_11815 f61d6c24d07b3b9af71d5a3ddca5c234 376 SMART SM00382 27 214 1.2E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_11815 f61d6c24d07b3b9af71d5a3ddca5c234 376 SUPERFAMILY SSF52540 3 246 1.42E-86 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_11815 f61d6c24d07b3b9af71d5a3ddca5c234 376 Pfam PF00005 ABC transporter 19 164 3.6E-36 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_11815 f61d6c24d07b3b9af71d5a3ddca5c234 376 SUPERFAMILY SSF50331 239 346 7.37E-6 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AL543_11815 f61d6c24d07b3b9af71d5a3ddca5c234 376 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_11815 f61d6c24d07b3b9af71d5a3ddca5c234 376 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 242 2.6E-115 T 11-10-2018 IPR005666 Sulphate transport system permease protein 1 GO:0008272|GO:0015419|GO:0016020|GO:0043190 KEGG: 00920+3.6.3.25 AL543_11815 f61d6c24d07b3b9af71d5a3ddca5c234 376 Pfam PF12857 TOBE-like domain 288 345 4.5E-14 T 11-10-2018 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 AL543_02425 5967dab1f4c1ded846eae2319b597fa7 410 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 138 177 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AL543_02425 5967dab1f4c1ded846eae2319b597fa7 410 TIGRFAM TIGR01882 peptidase-T: peptidase T 2 404 1.3E-152 T 11-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 AL543_02425 5967dab1f4c1ded846eae2319b597fa7 410 Hamap MF_00550 Peptidase T [pepT]. 1 404 54.223 T 11-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 AL543_02425 5967dab1f4c1ded846eae2319b597fa7 410 SUPERFAMILY SSF55031 209 319 4.19E-37 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AL543_02425 5967dab1f4c1ded846eae2319b597fa7 410 Pfam PF01546 Peptidase family M20/M25/M40 139 402 9.3E-15 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 AL543_02425 5967dab1f4c1ded846eae2319b597fa7 410 SUPERFAMILY SSF53187 1 403 1.06E-80 T 11-10-2018 AL543_02425 5967dab1f4c1ded846eae2319b597fa7 410 Pfam PF07687 Peptidase dimerisation domain 206 308 1.7E-13 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain AL543_02425 5967dab1f4c1ded846eae2319b597fa7 410 Gene3D G3DSA:3.30.70.360 209 319 2.4E-173 T 11-10-2018 AL543_02425 5967dab1f4c1ded846eae2319b597fa7 410 Gene3D G3DSA:3.40.630.10 4 400 2.4E-173 T 11-10-2018 AL543_02425 5967dab1f4c1ded846eae2319b597fa7 410 PIRSF PIRSF037215 1 408 1.4E-179 T 11-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 AL543_02425 5967dab1f4c1ded846eae2319b597fa7 410 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AL543_02830 e7a378395671d2abd149f12a8f4c6cf8 323 Gene3D G3DSA:3.40.50.1980 191 294 2.6E-104 T 11-10-2018 AL543_02830 e7a378395671d2abd149f12a8f4c6cf8 323 SUPERFAMILY SSF53807 38 301 3.92E-58 T 11-10-2018 AL543_02830 e7a378395671d2abd149f12a8f4c6cf8 323 Gene3D G3DSA:3.40.50.1980 45 300 2.6E-104 T 11-10-2018 AL543_02830 e7a378395671d2abd149f12a8f4c6cf8 323 Pfam PF01497 Periplasmic binding protein 62 295 1.8E-24 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain AL543_04125 1ffec9b669bd5431cb17852a4323a3f7 403 Gene3D G3DSA:2.40.50.940 253 312 4.5E-13 T 11-10-2018 AL543_04125 1ffec9b669bd5431cb17852a4323a3f7 403 Pfam PF00005 ABC transporter 50 192 2.0E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_04125 1ffec9b669bd5431cb17852a4323a3f7 403 SUPERFAMILY SSF52540 35 274 3.78E-86 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_04125 1ffec9b669bd5431cb17852a4323a3f7 403 SMART SM00382 59 242 1.0E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_04125 1ffec9b669bd5431cb17852a4323a3f7 403 TIGRFAM TIGR03265 PhnT2: putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein 32 384 2.9E-155 T 11-10-2018 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 GO:0005524 AL543_04125 1ffec9b669bd5431cb17852a4323a3f7 403 Gene3D G3DSA:3.40.50.300 34 252 5.4E-69 T 11-10-2018 AL543_04125 1ffec9b669bd5431cb17852a4323a3f7 403 Gene3D G3DSA:2.40.50.140 313 347 4.5E-13 T 11-10-2018 AL543_04125 1ffec9b669bd5431cb17852a4323a3f7 403 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_04125 1ffec9b669bd5431cb17852a4323a3f7 403 SUPERFAMILY SSF50331 268 381 5.44E-9 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AL543_10890 746e5d172acada2a05084b15c95317cc 118 Gene3D G3DSA:3.40.1260.10 1 118 2.1E-37 T 11-10-2018 IPR027396 DsrEFH-like AL543_10890 746e5d172acada2a05084b15c95317cc 118 Pfam PF02635 DsrE/DsrF-like family 3 118 1.6E-27 T 11-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein AL543_10890 746e5d172acada2a05084b15c95317cc 118 SUPERFAMILY SSF75169 2 118 1.62E-37 T 11-10-2018 IPR027396 DsrEFH-like AL543_10890 746e5d172acada2a05084b15c95317cc 118 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 3 118 3.9E-47 T 11-10-2018 IPR017462 Sulphur relay, TusC/DsrF AL543_01620 229464df6f389ed4896425eff14e508d 458 Pfam PF07670 Nucleoside recognition 144 237 7.2E-8 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AL543_20130 ca31b04cb45e1e3f986a2eaf3823f1d3 553 Gene3D G3DSA:3.60.21.10 30 365 1.0E-129 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like AL543_20130 ca31b04cb45e1e3f986a2eaf3823f1d3 553 SUPERFAMILY SSF56300 31 364 2.32E-101 T 11-10-2018 AL543_20130 ca31b04cb45e1e3f986a2eaf3823f1d3 553 SUPERFAMILY SSF55816 366 542 1.83E-51 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL543_20130 ca31b04cb45e1e3f986a2eaf3823f1d3 553 ProSitePatterns PS00786 5'-nucleotidase signature 2. 113 124 - T 11-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL543_20130 ca31b04cb45e1e3f986a2eaf3823f1d3 553 Pfam PF02872 5'-nucleotidase, C-terminal domain 366 512 1.4E-34 T 11-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL543_20130 ca31b04cb45e1e3f986a2eaf3823f1d3 553 Gene3D G3DSA:3.90.780.10 366 552 2.7E-59 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL543_20130 ca31b04cb45e1e3f986a2eaf3823f1d3 553 ProSitePatterns PS00785 5'-nucleotidase signature 1. 38 50 - T 11-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL543_20130 ca31b04cb45e1e3f986a2eaf3823f1d3 553 PRINTS PR01607 Apyrase family signature 211 228 2.2E-53 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL543_20130 ca31b04cb45e1e3f986a2eaf3823f1d3 553 PRINTS PR01607 Apyrase family signature 242 265 2.2E-53 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL543_20130 ca31b04cb45e1e3f986a2eaf3823f1d3 553 PRINTS PR01607 Apyrase family signature 420 443 2.2E-53 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL543_20130 ca31b04cb45e1e3f986a2eaf3823f1d3 553 PRINTS PR01607 Apyrase family signature 287 307 2.2E-53 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL543_20130 ca31b04cb45e1e3f986a2eaf3823f1d3 553 PRINTS PR01607 Apyrase family signature 487 506 2.2E-53 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL543_20130 ca31b04cb45e1e3f986a2eaf3823f1d3 553 PRINTS PR01607 Apyrase family signature 36 54 2.2E-53 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL543_20130 ca31b04cb45e1e3f986a2eaf3823f1d3 553 Pfam PF00149 Calcineurin-like phosphoesterase 38 259 2.3E-20 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AL543_19400 4cf50f3009f1b510ab361c71f281eb03 56 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.068 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_19400 4cf50f3009f1b510ab361c71f281eb03 56 SUPERFAMILY SSF57829 2 55 3.97E-18 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 AL543_19400 4cf50f3009f1b510ab361c71f281eb03 56 Pfam PF01783 Ribosomal L32p protein family 2 56 5.2E-20 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_19400 4cf50f3009f1b510ab361c71f281eb03 56 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 6.5E-20 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_18250 801eef5b8906509c0eaf676a0ba9e437 259 Gene3D G3DSA:3.40.930.10 105 252 1.0E-16 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AL543_18250 801eef5b8906509c0eaf676a0ba9e437 259 PIRSF PIRSF029195 1 259 2.1E-171 T 11-10-2018 IPR016910 Uncharacterised conserved protein UCP029195, PTS-EIIA 2 AL543_18250 801eef5b8906509c0eaf676a0ba9e437 259 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 129 252 4.0E-21 T 11-10-2018 IPR002178 PTS EIIA type-2 domain AL543_18250 801eef5b8906509c0eaf676a0ba9e437 259 SUPERFAMILY SSF55594 9 89 1.05E-10 T 11-10-2018 IPR035895 HPr-like superfamily AL543_18250 801eef5b8906509c0eaf676a0ba9e437 259 SUPERFAMILY SSF55804 127 250 7.72E-19 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AL543_12935 13beec62cc1cb53aef294d24e00b65d1 315 Gene3D G3DSA:1.20.1640.10 105 298 1.7E-12 T 11-10-2018 AL543_12935 13beec62cc1cb53aef294d24e00b65d1 315 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 39 285 5.7E-88 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AL543_12935 13beec62cc1cb53aef294d24e00b65d1 315 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 118 282 3.0E-57 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL543_12935 13beec62cc1cb53aef294d24e00b65d1 315 SUPERFAMILY SSF82866 74 293 3.53E-41 T 11-10-2018 AL543_12935 13beec62cc1cb53aef294d24e00b65d1 315 PRINTS PR01755 Bacterial translocase SecF protein signature 233 248 3.5E-32 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL543_12935 13beec62cc1cb53aef294d24e00b65d1 315 PRINTS PR01755 Bacterial translocase SecF protein signature 38 53 3.5E-32 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL543_12935 13beec62cc1cb53aef294d24e00b65d1 315 PRINTS PR01755 Bacterial translocase SecF protein signature 201 219 3.5E-32 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL543_12935 13beec62cc1cb53aef294d24e00b65d1 315 PRINTS PR01755 Bacterial translocase SecF protein signature 153 167 3.5E-32 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL543_12935 13beec62cc1cb53aef294d24e00b65d1 315 Pfam PF07549 SecD/SecF GG Motif 35 60 7.3E-11 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AL543_12935 13beec62cc1cb53aef294d24e00b65d1 315 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 11 296 29.827 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AL543_12935 13beec62cc1cb53aef294d24e00b65d1 315 Pfam PF02355 Protein export membrane protein 111 292 2.5E-71 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AL543_13385 cc876f4055f6288fac50cee587ebb810 161 Pfam PF01668 SmpB protein 15 157 8.2E-57 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 AL543_13385 cc876f4055f6288fac50cee587ebb810 161 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 15 139 3.0E-61 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 AL543_13385 cc876f4055f6288fac50cee587ebb810 161 Hamap MF_00023 SsrA-binding protein [smpB]. 1 161 71.021 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 AL543_13385 cc876f4055f6288fac50cee587ebb810 161 TIGRFAM TIGR00086 smpB: SsrA-binding protein 15 157 2.8E-53 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 AL543_13385 cc876f4055f6288fac50cee587ebb810 161 Gene3D G3DSA:2.40.280.10 7 136 7.0E-45 T 11-10-2018 IPR023620 Small protein B AL543_13385 cc876f4055f6288fac50cee587ebb810 161 SUPERFAMILY SSF74982 9 139 6.8E-49 T 11-10-2018 IPR023620 Small protein B AL543_13385 cc876f4055f6288fac50cee587ebb810 161 ProSitePatterns PS01317 SsrA-binding protein. 33 45 - T 11-10-2018 IPR020081 SsrA-binding protein, conserved site AL543_05850 5149d62b2a0c8f7443c2e9ff45b24dc4 421 PIRSF PIRSF000521 175 412 1.8E-29 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL543_05850 5149d62b2a0c8f7443c2e9ff45b24dc4 421 PIRSF PIRSF000521 121 154 1.7 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL543_05850 5149d62b2a0c8f7443c2e9ff45b24dc4 421 PIRSF PIRSF000521 2 125 1.4E-4 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL543_05850 5149d62b2a0c8f7443c2e9ff45b24dc4 421 Pfam PF00202 Aminotransferase class-III 15 407 1.2E-75 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL543_05850 5149d62b2a0c8f7443c2e9ff45b24dc4 421 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 2 412 1.1E-142 T 11-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 AL543_05850 5149d62b2a0c8f7443c2e9ff45b24dc4 421 TIGRFAM TIGR02407 ectoine_ectB: diaminobutyrate--2-oxoglutarate aminotransferase 2 409 5.5E-197 T 11-10-2018 IPR012773 Ectoine biosynthetic protein GO:0019491|GO:0030170|GO:0047307 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 AL543_05850 5149d62b2a0c8f7443c2e9ff45b24dc4 421 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 230 266 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL543_05850 5149d62b2a0c8f7443c2e9ff45b24dc4 421 Gene3D G3DSA:3.90.1150.10 7 405 2.0E-104 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL543_05850 5149d62b2a0c8f7443c2e9ff45b24dc4 421 SUPERFAMILY SSF53383 5 408 1.77E-103 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL543_05850 5149d62b2a0c8f7443c2e9ff45b24dc4 421 Gene3D G3DSA:3.40.640.10 54 313 2.0E-104 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL543_01195 5bd4c3410a0ee598238d72e057c2eced 276 Pfam PF01739 CheR methyltransferase, SAM binding domain 79 271 6.1E-59 T 11-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AL543_01195 5bd4c3410a0ee598238d72e057c2eced 276 PRINTS PR00996 Glutamate methyltransferase family signature 216 230 1.9E-45 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL543_01195 5bd4c3410a0ee598238d72e057c2eced 276 PRINTS PR00996 Glutamate methyltransferase family signature 72 84 1.9E-45 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL543_01195 5bd4c3410a0ee598238d72e057c2eced 276 PRINTS PR00996 Glutamate methyltransferase family signature 35 48 1.9E-45 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL543_01195 5bd4c3410a0ee598238d72e057c2eced 276 PRINTS PR00996 Glutamate methyltransferase family signature 145 161 1.9E-45 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL543_01195 5bd4c3410a0ee598238d72e057c2eced 276 PRINTS PR00996 Glutamate methyltransferase family signature 235 258 1.9E-45 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL543_01195 5bd4c3410a0ee598238d72e057c2eced 276 PRINTS PR00996 Glutamate methyltransferase family signature 110 130 1.9E-45 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL543_01195 5bd4c3410a0ee598238d72e057c2eced 276 Pfam PF03705 CheR methyltransferase, all-alpha domain 14 66 7.6E-14 T 11-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AL543_01195 5bd4c3410a0ee598238d72e057c2eced 276 Gene3D G3DSA:3.40.50.150 78 276 2.6E-63 T 11-10-2018 AL543_01195 5bd4c3410a0ee598238d72e057c2eced 276 PIRSF PIRSF000410 1 276 1.6E-104 T 11-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR AL543_01195 5bd4c3410a0ee598238d72e057c2eced 276 SUPERFAMILY SSF53335 79 274 5.03E-56 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL543_01195 5bd4c3410a0ee598238d72e057c2eced 276 Gene3D G3DSA:1.10.155.10 1 77 8.2E-22 T 11-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily AL543_01195 5bd4c3410a0ee598238d72e057c2eced 276 SUPERFAMILY SSF47757 6 78 1.44E-19 T 11-10-2018 AL543_01195 5bd4c3410a0ee598238d72e057c2eced 276 SMART SM00138 13 276 4.5E-91 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL543_07720 696bbb50d9c3c3026d08c51e542486e0 330 SMART SM00662 23 235 4.9E-104 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL543_07720 696bbb50d9c3c3026d08c51e542486e0 330 SUPERFAMILY SSF47789 252 326 1.44E-25 T 11-10-2018 AL543_07720 696bbb50d9c3c3026d08c51e542486e0 330 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 62 157 2.6E-24 T 11-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL543_07720 696bbb50d9c3c3026d08c51e542486e0 330 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 318 34.977 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL543_07720 696bbb50d9c3c3026d08c51e542486e0 330 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 246 309 7.1E-24 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL543_07720 696bbb50d9c3c3026d08c51e542486e0 330 Gene3D G3DSA:2.170.120.12 53 178 1.2E-83 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL543_07720 696bbb50d9c3c3026d08c51e542486e0 330 Gene3D G3DSA:1.10.150.20 245 330 1.4E-38 T 11-10-2018 AL543_07720 696bbb50d9c3c3026d08c51e542486e0 330 SUPERFAMILY SSF56553 53 179 5.06E-41 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL543_07720 696bbb50d9c3c3026d08c51e542486e0 330 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 257 330 2.0E-36 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL543_07720 696bbb50d9c3c3026d08c51e542486e0 330 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 317 4.0E-112 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL543_07720 696bbb50d9c3c3026d08c51e542486e0 330 SUPERFAMILY SSF55257 7 234 3.93E-30 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL543_07720 696bbb50d9c3c3026d08c51e542486e0 330 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 229 2.5E-23 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL543_07720 696bbb50d9c3c3026d08c51e542486e0 330 Gene3D G3DSA:3.30.1360.10 17 229 1.2E-83 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL543_11810 cc21aa2c8f1457c70c0758212913c530 287 SUPERFAMILY SSF161098 13 265 1.07E-56 T 11-10-2018 IPR035906 MetI-like superfamily AL543_11810 cc21aa2c8f1457c70c0758212913c530 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 275 6.7E-15 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL543_11810 cc21aa2c8f1457c70c0758212913c530 287 Gene3D G3DSA:1.10.3720.10 17 275 1.3E-63 T 11-10-2018 IPR035906 MetI-like superfamily AL543_11810 cc21aa2c8f1457c70c0758212913c530 287 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 15 274 3.5E-130 T 11-10-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 AL543_11810 cc21aa2c8f1457c70c0758212913c530 287 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 14 272 7.3E-101 T 11-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 AL543_00325 d162648c851811d8fdb8b87192d68586 312 SUPERFAMILY SSF46785 11 90 3.64E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_00325 d162648c851811d8fdb8b87192d68586 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 5.6E-20 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_00325 d162648c851811d8fdb8b87192d68586 312 Gene3D G3DSA:1.10.10.10 9 95 3.1E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_00325 d162648c851811d8fdb8b87192d68586 312 Gene3D G3DSA:3.40.190.10 169 270 7.5E-59 T 11-10-2018 AL543_00325 d162648c851811d8fdb8b87192d68586 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 5.7E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_00325 d162648c851811d8fdb8b87192d68586 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 5.7E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_00325 d162648c851811d8fdb8b87192d68586 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 5.7E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_00325 d162648c851811d8fdb8b87192d68586 312 SUPERFAMILY SSF53850 95 303 2.71E-39 T 11-10-2018 AL543_00325 d162648c851811d8fdb8b87192d68586 312 Gene3D G3DSA:3.40.190.10 98 298 7.5E-59 T 11-10-2018 AL543_00325 d162648c851811d8fdb8b87192d68586 312 Pfam PF03466 LysR substrate binding domain 94 301 1.6E-41 T 11-10-2018 IPR005119 LysR, substrate-binding AL543_08330 c389519db2ef92358af7c076dcddb504 601 SUPERFAMILY SSF74863 38 150 1.1E-39 T 11-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily AL543_08330 c389519db2ef92358af7c076dcddb504 601 Gene3D G3DSA:2.60.40.1250 33 166 3.4E-40 T 11-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily AL543_08330 c389519db2ef92358af7c076dcddb504 601 Pfam PF11412 Disulphide bond corrector protein DsbC 40 150 8.4E-30 T 11-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AL543_08330 c389519db2ef92358af7c076dcddb504 601 ProSitePatterns PS00194 Thioredoxin family active site. 508 526 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AL543_08330 c389519db2ef92358af7c076dcddb504 601 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 600 39.34 T 11-10-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 AL543_08330 c389519db2ef92358af7c076dcddb504 601 Pfam PF13899 Thioredoxin-like 489 553 2.1E-14 T 11-10-2018 AL543_08330 c389519db2ef92358af7c076dcddb504 601 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 208 408 1.9E-17 T 11-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 AL543_08330 c389519db2ef92358af7c076dcddb504 601 SUPERFAMILY SSF52833 485 597 7.49E-22 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL543_08330 c389519db2ef92358af7c076dcddb504 601 Gene3D G3DSA:3.40.30.10 473 599 1.8E-34 T 11-10-2018 AL543_17685 4510ebe3f35f0435bc395e03adce3e78 341 Gene3D G3DSA:3.40.50.300 1 176 1.3E-59 T 11-10-2018 AL543_17685 4510ebe3f35f0435bc395e03adce3e78 341 SUPERFAMILY SSF52540 5 238 2.66E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_17685 4510ebe3f35f0435bc395e03adce3e78 341 Pfam PF00158 Sigma-54 interaction domain 5 168 1.4E-58 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL543_17685 4510ebe3f35f0435bc395e03adce3e78 341 SMART SM00382 25 177 1.0E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_17685 4510ebe3f35f0435bc395e03adce3e78 341 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 219 228 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AL543_17685 4510ebe3f35f0435bc395e03adce3e78 341 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 5 328 4.8E-164 T 11-10-2018 IPR014317 Transcription activator PspF AL543_17685 4510ebe3f35f0435bc395e03adce3e78 341 Gene3D G3DSA:1.10.10.60 266 330 1.9E-6 T 11-10-2018 AL543_17685 4510ebe3f35f0435bc395e03adce3e78 341 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 91 106 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL543_17685 4510ebe3f35f0435bc395e03adce3e78 341 SUPERFAMILY SSF46689 219 328 7.17E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_17685 4510ebe3f35f0435bc395e03adce3e78 341 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 294 311 1.2E-5 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL543_17685 4510ebe3f35f0435bc395e03adce3e78 341 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 311 331 1.2E-5 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL543_17685 4510ebe3f35f0435bc395e03adce3e78 341 Pfam PF02954 Bacterial regulatory protein, Fis family 294 328 1.2E-6 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL543_17685 4510ebe3f35f0435bc395e03adce3e78 341 Gene3D G3DSA:1.10.8.60 177 260 6.6E-27 T 11-10-2018 AL543_02610 b5609c9309c6f7b7a29f2f1eaf90a08b 606 Pfam PF03237 Terminase-like family 182 403 2.0E-60 T 11-10-2018 IPR004921 Terminase large subunit, T4likevirus-type AL543_02610 b5609c9309c6f7b7a29f2f1eaf90a08b 606 Pfam PF17289 Terminase RNaseH-like domain 430 589 5.8E-39 T 11-10-2018 IPR035421 Terminase, large subunit gp17-like AL543_02610 b5609c9309c6f7b7a29f2f1eaf90a08b 606 Gene3D G3DSA:3.30.420.240 405 589 1.2E-8 T 11-10-2018 AL543_02610 b5609c9309c6f7b7a29f2f1eaf90a08b 606 Pfam PF06056 Putative ATPase subunit of terminase (gpP-like) 6 64 9.6E-22 T 11-10-2018 IPR010332 ATPase terminase subunit, putative GO:0005524|GO:0019069 AL543_02610 b5609c9309c6f7b7a29f2f1eaf90a08b 606 Gene3D G3DSA:3.40.50.300 105 323 4.1E-21 T 11-10-2018 AL543_11505 b57b30659255473a4d4d86f04d57140c 306 Hamap MF_00313 Glutaminase [glsA]. 4 306 47.181 T 11-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 AL543_11505 b57b30659255473a4d4d86f04d57140c 306 Gene3D G3DSA:3.40.710.10 1 306 1.4E-111 T 11-10-2018 AL543_11505 b57b30659255473a4d4d86f04d57140c 306 SUPERFAMILY SSF56601 4 306 1.04E-114 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AL543_11505 b57b30659255473a4d4d86f04d57140c 306 TIGRFAM TIGR03814 Gln_ase: glutaminase A 8 306 1.5E-131 T 11-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 AL543_11505 b57b30659255473a4d4d86f04d57140c 306 Pfam PF04960 Glutaminase 22 306 1.6E-113 T 11-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 AL543_09430 51fb7ca956da2514521c9e0571997dbb 723 SUPERFAMILY SSF48179 496 604 6.29E-28 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AL543_09430 51fb7ca956da2514521c9e0571997dbb 723 Gene3D G3DSA:1.10.1040.50 498 710 1.3E-73 T 11-10-2018 AL543_09430 51fb7ca956da2514521c9e0571997dbb 723 SUPERFAMILY SSF48179 624 715 5.1E-25 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AL543_09430 51fb7ca956da2514521c9e0571997dbb 723 Gene3D G3DSA:3.90.226.10 1 312 8.0E-91 T 11-10-2018 AL543_09430 51fb7ca956da2514521c9e0571997dbb 723 SUPERFAMILY SSF51735 313 496 1.21E-54 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_09430 51fb7ca956da2514521c9e0571997dbb 723 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 317 495 7.1E-58 T 11-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AL543_09430 51fb7ca956da2514521c9e0571997dbb 723 Gene3D G3DSA:3.40.50.720 314 497 1.5E-63 T 11-10-2018 AL543_09430 51fb7ca956da2514521c9e0571997dbb 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 628 712 1.3E-5 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AL543_09430 51fb7ca956da2514521c9e0571997dbb 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 593 4.9E-25 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AL543_09430 51fb7ca956da2514521c9e0571997dbb 723 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 715 0.0 T 11-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AL543_09430 51fb7ca956da2514521c9e0571997dbb 723 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 494 518 - T 11-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AL543_09430 51fb7ca956da2514521c9e0571997dbb 723 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 208 4.7E-40 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AL543_09430 51fb7ca956da2514521c9e0571997dbb 723 SUPERFAMILY SSF52096 2 305 1.08E-66 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AL543_09430 51fb7ca956da2514521c9e0571997dbb 723 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 716 53.385 T 11-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AL543_09475 086564576512ac974e7683daa65d0581 177 Gene3D G3DSA:1.10.520.20 2 106 7.5E-37 T 11-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL543_09475 086564576512ac974e7683daa65d0581 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 175 5.0E-51 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL543_09475 086564576512ac974e7683daa65d0581 177 SUPERFAMILY SSF47928 3 105 2.48E-26 T 11-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL543_09475 086564576512ac974e7683daa65d0581 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 18.231 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL543_09475 086564576512ac974e7683daa65d0581 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 11-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL543_09475 086564576512ac974e7683daa65d0581 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 8.8E-26 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL543_09475 086564576512ac974e7683daa65d0581 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 8.8E-26 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL543_09475 086564576512ac974e7683daa65d0581 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 8.8E-26 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL543_09475 086564576512ac974e7683daa65d0581 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 8.8E-26 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL543_09475 086564576512ac974e7683daa65d0581 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 8.8E-26 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL543_09475 086564576512ac974e7683daa65d0581 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 1.7E-60 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL543_17345 9a33394942e5afc30480ff88e9ec3751 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 8.0E-20 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_17345 9a33394942e5afc30480ff88e9ec3751 289 Pfam PF03466 LysR substrate binding domain 89 287 5.3E-45 T 11-10-2018 IPR005119 LysR, substrate-binding AL543_17345 9a33394942e5afc30480ff88e9ec3751 289 Gene3D G3DSA:1.10.10.10 1 83 6.2E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_17345 9a33394942e5afc30480ff88e9ec3751 289 Gene3D G3DSA:3.40.190.290 90 289 1.4E-48 T 11-10-2018 AL543_17345 9a33394942e5afc30480ff88e9ec3751 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.8E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_17345 9a33394942e5afc30480ff88e9ec3751 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.8E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_17345 9a33394942e5afc30480ff88e9ec3751 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.8E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_17345 9a33394942e5afc30480ff88e9ec3751 289 SUPERFAMILY SSF53850 89 288 1.09E-39 T 11-10-2018 AL543_17345 9a33394942e5afc30480ff88e9ec3751 289 SUPERFAMILY SSF46785 1 86 9.31E-24 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_01035 5d2db167d7736afd07b737687360823d 218 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 14 210 1.8E-77 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL543_01035 5d2db167d7736afd07b737687360823d 218 SUPERFAMILY SSF55821 10 213 2.75E-82 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AL543_01035 5d2db167d7736afd07b737687360823d 218 Gene3D G3DSA:3.90.870.10 6 218 3.5E-91 T 11-10-2018 AL543_01035 5d2db167d7736afd07b737687360823d 218 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 18 209 2.2E-80 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL543_01035 5d2db167d7736afd07b737687360823d 218 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 12 214 42.734 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL543_16660 a435149a5d2550678c99407784c90f1c 575 Gene3D G3DSA:3.40.50.2300 437 569 1.9E-40 T 11-10-2018 AL543_16660 a435149a5d2550678c99407784c90f1c 575 Pfam PF00512 His Kinase A (phospho-acceptor) domain 211 275 1.1E-17 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_16660 a435149a5d2550678c99407784c90f1c 575 SUPERFAMILY SSF47384 196 276 4.9E-20 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL543_16660 a435149a5d2550678c99407784c90f1c 575 SUPERFAMILY SSF55874 264 431 3.14E-47 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_16660 a435149a5d2550678c99407784c90f1c 575 Gene3D G3DSA:1.10.287.130 177 273 9.6E-24 T 11-10-2018 AL543_16660 a435149a5d2550678c99407784c90f1c 575 Gene3D G3DSA:3.30.565.10 274 436 4.5E-45 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_16660 a435149a5d2550678c99407784c90f1c 575 Pfam PF00072 Response regulator receiver domain 456 566 1.9E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_16660 a435149a5d2550678c99407784c90f1c 575 SMART SM00448 454 566 1.6E-37 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_16660 a435149a5d2550678c99407784c90f1c 575 SUPERFAMILY SSF52172 453 571 1.42E-37 T 11-10-2018 IPR011006 CheY-like superfamily AL543_16660 a435149a5d2550678c99407784c90f1c 575 SMART SM00387 322 433 1.7E-37 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_16660 a435149a5d2550678c99407784c90f1c 575 SMART SM00388 211 275 8.1E-20 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_16660 a435149a5d2550678c99407784c90f1c 575 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 322 432 1.1E-31 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_16660 a435149a5d2550678c99407784c90f1c 575 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 386 7.6E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_16660 a435149a5d2550678c99407784c90f1c 575 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 411 7.6E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_16660 a435149a5d2550678c99407784c90f1c 575 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 430 7.6E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_16660 a435149a5d2550678c99407784c90f1c 575 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 372 7.6E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_17635 8be0e421f97a21526c8e76a444448ecd 211 Gene3D G3DSA:1.20.120.1760 1 200 1.2E-20 T 11-10-2018 AL543_17635 8be0e421f97a21526c8e76a444448ecd 211 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 89 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AL543_17635 8be0e421f97a21526c8e76a444448ecd 211 Pfam PF01066 CDP-alcohol phosphatidyltransferase 28 89 1.1E-10 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AL543_03305 571ba279ac74a5f7b3624e7242bd9f78 144 Gene3D G3DSA:3.40.30.10 41 144 1.7E-33 T 11-10-2018 AL543_03305 571ba279ac74a5f7b3624e7242bd9f78 144 TIGRFAM TIGR01068 thioredoxin: thioredoxin 45 141 6.3E-35 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AL543_03305 571ba279ac74a5f7b3624e7242bd9f78 144 Gene3D G3DSA:2.20.28.140 1 37 1.3E-15 T 11-10-2018 AL543_03305 571ba279ac74a5f7b3624e7242bd9f78 144 Pfam PF00085 Thioredoxin 43 140 2.3E-28 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 AL543_03305 571ba279ac74a5f7b3624e7242bd9f78 144 SUPERFAMILY SSF52833 29 142 1.73E-37 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL543_03305 571ba279ac74a5f7b3624e7242bd9f78 144 PIRSF PIRSF000077 38 142 3.2E-32 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AL543_03305 571ba279ac74a5f7b3624e7242bd9f78 144 PRINTS PR00421 Thioredoxin family signature 58 66 1.6E-7 T 11-10-2018 AL543_03305 571ba279ac74a5f7b3624e7242bd9f78 144 PRINTS PR00421 Thioredoxin family signature 106 117 1.6E-7 T 11-10-2018 AL543_03305 571ba279ac74a5f7b3624e7242bd9f78 144 PRINTS PR00421 Thioredoxin family signature 66 75 1.6E-7 T 11-10-2018 AL543_14455 e082a12518631c3813e83b51783a45a5 672 Gene3D G3DSA:3.40.190.10 26 111 7.7E-10 T 11-10-2018 AL543_14455 e082a12518631c3813e83b51783a45a5 672 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 511 654 1.8E-26 T 11-10-2018 IPR000160 GGDEF domain AL543_14455 e082a12518631c3813e83b51783a45a5 672 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 46 182 7.4E-17 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL543_14455 e082a12518631c3813e83b51783a45a5 672 SMART SM00062 29 230 2.5E-8 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL543_14455 e082a12518631c3813e83b51783a45a5 672 SMART SM00062 249 496 7.2E-11 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL543_14455 e082a12518631c3813e83b51783a45a5 672 SMART SM00267 501 661 5.8E-24 T 11-10-2018 IPR000160 GGDEF domain AL543_14455 e082a12518631c3813e83b51783a45a5 672 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 255 444 2.4E-26 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL543_14455 e082a12518631c3813e83b51783a45a5 672 Pfam PF00990 Diguanylate cyclase, GGDEF domain 512 654 2.0E-28 T 11-10-2018 IPR000160 GGDEF domain AL543_14455 e082a12518631c3813e83b51783a45a5 672 SUPERFAMILY SSF55073 517 656 7.45E-29 T 11-10-2018 IPR029787 Nucleotide cyclase AL543_14455 e082a12518631c3813e83b51783a45a5 672 SUPERFAMILY SSF53850 250 464 1.6E-29 T 11-10-2018 AL543_14455 e082a12518631c3813e83b51783a45a5 672 SUPERFAMILY SSF53850 48 226 3.8E-22 T 11-10-2018 AL543_14455 e082a12518631c3813e83b51783a45a5 672 Gene3D G3DSA:3.40.190.10 336 434 7.5E-31 T 11-10-2018 AL543_14455 e082a12518631c3813e83b51783a45a5 672 Gene3D G3DSA:3.40.190.10 113 180 1.0E-6 T 11-10-2018 AL543_14455 e082a12518631c3813e83b51783a45a5 672 Gene3D G3DSA:3.40.190.10 247 466 7.5E-31 T 11-10-2018 AL543_14455 e082a12518631c3813e83b51783a45a5 672 Gene3D G3DSA:3.30.70.270 507 670 2.9E-33 T 11-10-2018 AL543_00035 8fad3e49ddb16074484200b3feaf3b78 347 Pfam PF13384 Homeodomain-like domain 28 67 4.3E-7 T 11-10-2018 AL543_00035 8fad3e49ddb16074484200b3feaf3b78 347 Pfam PF13358 DDE superfamily endonuclease 169 312 1.9E-34 T 11-10-2018 IPR038717 Tc1-like transposase, DDE domain AL543_00035 8fad3e49ddb16074484200b3feaf3b78 347 SUPERFAMILY SSF53098 221 316 2.58E-7 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_00035 8fad3e49ddb16074484200b3feaf3b78 347 SUPERFAMILY SSF46689 16 131 4.06E-24 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_00035 8fad3e49ddb16074484200b3feaf3b78 347 Pfam PF13592 Winged helix-turn helix 98 155 2.6E-18 T 11-10-2018 IPR025959 Winged helix-turn helix domain AL543_00035 8fad3e49ddb16074484200b3feaf3b78 347 Gene3D G3DSA:3.30.420.470 138 344 4.4E-12 T 11-10-2018 AL543_08605 8fad3e49ddb16074484200b3feaf3b78 347 Pfam PF13384 Homeodomain-like domain 28 67 4.3E-7 T 11-10-2018 AL543_08605 8fad3e49ddb16074484200b3feaf3b78 347 Pfam PF13358 DDE superfamily endonuclease 169 312 1.9E-34 T 11-10-2018 IPR038717 Tc1-like transposase, DDE domain AL543_08605 8fad3e49ddb16074484200b3feaf3b78 347 SUPERFAMILY SSF53098 221 316 2.58E-7 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_08605 8fad3e49ddb16074484200b3feaf3b78 347 SUPERFAMILY SSF46689 16 131 4.06E-24 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_08605 8fad3e49ddb16074484200b3feaf3b78 347 Pfam PF13592 Winged helix-turn helix 98 155 2.6E-18 T 11-10-2018 IPR025959 Winged helix-turn helix domain AL543_08605 8fad3e49ddb16074484200b3feaf3b78 347 Gene3D G3DSA:3.30.420.470 138 344 4.4E-12 T 11-10-2018 AL543_00640 3c6542411b9628f63f2d1278ebb8d4ed 173 Pfam PF13302 Acetyltransferase (GNAT) domain 5 139 3.0E-19 T 11-10-2018 IPR000182 GNAT domain AL543_00640 3c6542411b9628f63f2d1278ebb8d4ed 173 SUPERFAMILY SSF55729 3 164 9.31E-41 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL543_00640 3c6542411b9628f63f2d1278ebb8d4ed 173 Gene3D G3DSA:3.40.630.30 4 173 5.5E-52 T 11-10-2018 AL543_04460 621a6aef10e1b8c76f4bdfd442510f6c 461 SUPERFAMILY SSF53850 33 252 1.0E-40 T 11-10-2018 AL543_04460 621a6aef10e1b8c76f4bdfd442510f6c 461 Gene3D G3DSA:3.40.190.10 29 250 2.7E-39 T 11-10-2018 AL543_04460 621a6aef10e1b8c76f4bdfd442510f6c 461 Gene3D G3DSA:3.30.70.270 291 459 1.4E-43 T 11-10-2018 AL543_04460 621a6aef10e1b8c76f4bdfd442510f6c 461 SMART SM00062 32 254 2.2E-12 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL543_04460 621a6aef10e1b8c76f4bdfd442510f6c 461 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 33 251 3.3E-34 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL543_04460 621a6aef10e1b8c76f4bdfd442510f6c 461 SUPERFAMILY SSF55073 307 457 4.32E-38 T 11-10-2018 IPR029787 Nucleotide cyclase AL543_04460 621a6aef10e1b8c76f4bdfd442510f6c 461 Gene3D G3DSA:3.40.190.10 117 213 2.7E-39 T 11-10-2018 AL543_04460 621a6aef10e1b8c76f4bdfd442510f6c 461 SMART SM00267 291 458 8.3E-41 T 11-10-2018 IPR000160 GGDEF domain AL543_04460 621a6aef10e1b8c76f4bdfd442510f6c 461 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 300 457 4.7E-35 T 11-10-2018 IPR000160 GGDEF domain AL543_04460 621a6aef10e1b8c76f4bdfd442510f6c 461 Pfam PF00990 Diguanylate cyclase, GGDEF domain 303 454 4.3E-34 T 11-10-2018 IPR000160 GGDEF domain AL543_18645 8dd410940452b24451c43eac2c4e53f5 173 Gene3D G3DSA:1.20.1550.10 3 173 2.6E-55 T 11-10-2018 IPR023380 DsbB-like superfamily AL543_18645 8dd410940452b24451c43eac2c4e53f5 173 Pfam PF02600 Disulfide bond formation protein DsbB 14 161 4.9E-42 T 11-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 AL543_18645 8dd410940452b24451c43eac2c4e53f5 173 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 9 170 21.446 T 11-10-2018 IPR022920 Disulphide bond formation protein DsbB AL543_18645 8dd410940452b24451c43eac2c4e53f5 173 SUPERFAMILY SSF158442 17 162 5.89E-44 T 11-10-2018 IPR023380 DsbB-like superfamily AL543_02930 42bd0eea362d839c7d9a593f619639b8 586 Gene3D G3DSA:3.40.50.2300 489 579 1.1E-17 T 11-10-2018 AL543_02930 42bd0eea362d839c7d9a593f619639b8 586 PIRSF PIRSF037343 1 581 6.8E-283 T 11-10-2018 IPR017180 Phosphotransferase system component IIBC, sugar-specific, predicted AL543_02930 42bd0eea362d839c7d9a593f619639b8 586 Pfam PF03611 PTS system sugar-specific permease component 15 407 3.0E-123 T 11-10-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 AL543_02930 42bd0eea362d839c7d9a593f619639b8 586 SUPERFAMILY SSF52794 490 580 6.02E-14 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 AL543_02930 42bd0eea362d839c7d9a593f619639b8 586 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 491 564 5.3E-12 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL543_09750 dbac4ffb31435d4a7b79492c42f9ca3b 169 Pfam PF01327 Polypeptide deformylase 4 152 3.5E-50 T 11-10-2018 IPR023635 Peptide deformylase AL543_09750 dbac4ffb31435d4a7b79492c42f9ca3b 169 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 1.0E-61 T 11-10-2018 IPR023635 Peptide deformylase AL543_09750 dbac4ffb31435d4a7b79492c42f9ca3b 169 Gene3D G3DSA:3.90.45.10 1 169 7.4E-68 T 11-10-2018 IPR036821 Peptide deformylase superfamily AL543_09750 dbac4ffb31435d4a7b79492c42f9ca3b 169 Hamap MF_00163 Peptide deformylase [def]. 2 162 31.011 T 11-10-2018 IPR023635 Peptide deformylase AL543_09750 dbac4ffb31435d4a7b79492c42f9ca3b 169 PIRSF PIRSF004749 1 169 2.3E-56 T 11-10-2018 IPR023635 Peptide deformylase AL543_09750 dbac4ffb31435d4a7b79492c42f9ca3b 169 SUPERFAMILY SSF56420 3 165 1.96E-62 T 11-10-2018 IPR036821 Peptide deformylase superfamily AL543_09750 dbac4ffb31435d4a7b79492c42f9ca3b 169 PRINTS PR01576 Peptide deformylase signature 120 149 3.2E-37 T 11-10-2018 IPR023635 Peptide deformylase AL543_09750 dbac4ffb31435d4a7b79492c42f9ca3b 169 PRINTS PR01576 Peptide deformylase signature 89 100 3.2E-37 T 11-10-2018 IPR023635 Peptide deformylase AL543_09750 dbac4ffb31435d4a7b79492c42f9ca3b 169 PRINTS PR01576 Peptide deformylase signature 101 119 3.2E-37 T 11-10-2018 IPR023635 Peptide deformylase AL543_09750 dbac4ffb31435d4a7b79492c42f9ca3b 169 PRINTS PR01576 Peptide deformylase signature 33 62 3.2E-37 T 11-10-2018 IPR023635 Peptide deformylase AL543_09305 c055ffbb17c75f46b5e69ace50d4c7cf 304 Gene3D G3DSA:3.40.50.10490 4 223 1.4E-70 T 11-10-2018 AL543_09305 c055ffbb17c75f46b5e69ace50d4c7cf 304 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 7 300 36.622 T 11-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 AL543_09305 c055ffbb17c75f46b5e69ace50d4c7cf 304 Pfam PF13580 SIS domain 45 170 3.7E-11 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL543_09305 c055ffbb17c75f46b5e69ace50d4c7cf 304 Gene3D G3DSA:1.10.8.1080 224 302 3.7E-21 T 11-10-2018 AL543_09305 c055ffbb17c75f46b5e69ace50d4c7cf 304 SUPERFAMILY SSF53697 10 254 5.87E-64 T 11-10-2018 AL543_09305 c055ffbb17c75f46b5e69ace50d4c7cf 304 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 11 301 6.1E-98 T 11-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 AL543_09305 c055ffbb17c75f46b5e69ace50d4c7cf 304 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 190 207 - T 11-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 AL543_16270 7c8730f72e86c13fdc70f043e9e27b5c 387 SUPERFAMILY SSF52440 174 280 2.47E-38 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AL543_16270 7c8730f72e86c13fdc70f043e9e27b5c 387 SUPERFAMILY SSF56059 1 385 7.77E-88 T 11-10-2018 AL543_16270 7c8730f72e86c13fdc70f043e9e27b5c 387 Gene3D G3DSA:3.30.1490.330 264 345 4.9E-23 T 11-10-2018 AL543_16270 7c8730f72e86c13fdc70f043e9e27b5c 387 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 386 2.7E-156 T 11-10-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain AL543_11185 995f9ad4700483707a82a8a934693ace 184 Gene3D G3DSA:3.30.700.10 8 183 1.4E-10 T 11-10-2018 AL543_11185 995f9ad4700483707a82a8a934693ace 184 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 28 1.8E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL543_11185 995f9ad4700483707a82a8a934693ace 184 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL543_11185 995f9ad4700483707a82a8a934693ace 184 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 28 5.3E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL543_11185 995f9ad4700483707a82a8a934693ace 184 SUPERFAMILY SSF54523 8 105 3.61E-13 T 11-10-2018 AL543_11780 632ba44bca691aad96c267eaa91ab0ec 309 Pfam PF01551 Peptidase family M23 210 304 3.5E-30 T 11-10-2018 IPR016047 Peptidase M23 AL543_11780 632ba44bca691aad96c267eaa91ab0ec 309 Pfam PF01476 LysM domain 48 90 9.8E-12 T 11-10-2018 IPR018392 LysM domain AL543_11780 632ba44bca691aad96c267eaa91ab0ec 309 SUPERFAMILY SSF54106 46 91 5.36E-10 T 11-10-2018 AL543_11780 632ba44bca691aad96c267eaa91ab0ec 309 Gene3D G3DSA:2.70.70.10 173 308 4.4E-36 T 11-10-2018 IPR011055 Duplicated hybrid motif AL543_11780 632ba44bca691aad96c267eaa91ab0ec 309 SUPERFAMILY SSF51261 157 308 1.1E-47 T 11-10-2018 IPR011055 Duplicated hybrid motif AL543_11780 632ba44bca691aad96c267eaa91ab0ec 309 SMART SM00257 47 91 8.7E-11 T 11-10-2018 IPR018392 LysM domain AL543_11780 632ba44bca691aad96c267eaa91ab0ec 309 Gene3D G3DSA:3.10.350.10 47 89 7.5E-11 T 11-10-2018 IPR036779 LysM domain superfamily AL543_09555 3b0eb75b7a492dd002f8063a89b91aed 45 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 3 43 2.0E-15 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_09555 3b0eb75b7a492dd002f8063a89b91aed 45 ProSitePatterns PS00784 Ribosomal protein L34 signature. 3 22 - T 11-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_09555 3b0eb75b7a492dd002f8063a89b91aed 45 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 2 45 16.462 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_09555 3b0eb75b7a492dd002f8063a89b91aed 45 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 3 44 8.1E-26 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_09555 3b0eb75b7a492dd002f8063a89b91aed 45 Pfam PF00468 Ribosomal protein L34 3 44 2.5E-24 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_04705 4dcb9843f7485bf22c755aa13f74147a 317 SUPERFAMILY SSF53613 6 297 1.34E-70 T 11-10-2018 IPR029056 Ribokinase-like AL543_04705 4dcb9843f7485bf22c755aa13f74147a 317 Gene3D G3DSA:3.40.1190.20 2 311 1.2E-95 T 11-10-2018 IPR029056 Ribokinase-like AL543_04705 4dcb9843f7485bf22c755aa13f74147a 317 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 5 308 1.3E-103 T 11-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 AL543_04705 4dcb9843f7485bf22c755aa13f74147a 317 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 5 309 2.1E-105 T 11-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 AL543_04705 4dcb9843f7485bf22c755aa13f74147a 317 Pfam PF00294 pfkB family carbohydrate kinase 26 294 9.6E-53 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB AL543_04705 4dcb9843f7485bf22c755aa13f74147a 317 PIRSF PIRSF000535 2 311 3.1E-98 T 11-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 AL543_04705 4dcb9843f7485bf22c755aa13f74147a 317 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 39 63 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AL543_16765 77a8a9833cdff50a21e687b8666e0b54 157 SUPERFAMILY SSF55781 4 145 3.36E-38 T 11-10-2018 AL543_16765 77a8a9833cdff50a21e687b8666e0b54 157 Gene3D G3DSA:3.30.450.40 2 157 1.4E-62 T 11-10-2018 IPR029016 GAF-like domain superfamily AL543_16765 77a8a9833cdff50a21e687b8666e0b54 157 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 89 106 - T 11-10-2018 IPR000614 Free Met sulfoxide reductase conserved site AL543_16765 77a8a9833cdff50a21e687b8666e0b54 157 Pfam PF13185 GAF domain 44 146 7.2E-10 T 11-10-2018 IPR003018 GAF domain GO:0005515 AL543_18360 40b261852cc59a78fa3a98ab90924462 459 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 458 2.5E-193 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 AL543_18360 40b261852cc59a78fa3a98ab90924462 459 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 459 39.251 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 AL543_18360 40b261852cc59a78fa3a98ab90924462 459 Gene3D G3DSA:1.20.120.640 306 459 8.1E-52 T 11-10-2018 AL543_18360 40b261852cc59a78fa3a98ab90924462 459 SUPERFAMILY SSF47323 316 458 3.79E-41 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL543_18360 40b261852cc59a78fa3a98ab90924462 459 Pfam PF09190 DALR domain 341 402 2.8E-24 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 AL543_18360 40b261852cc59a78fa3a98ab90924462 459 SUPERFAMILY SSF52374 1 313 2.09E-103 T 11-10-2018 AL543_18360 40b261852cc59a78fa3a98ab90924462 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 3.6E-29 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AL543_18360 40b261852cc59a78fa3a98ab90924462 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 3.6E-29 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AL543_18360 40b261852cc59a78fa3a98ab90924462 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 3.6E-29 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AL543_18360 40b261852cc59a78fa3a98ab90924462 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 3.6E-29 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AL543_18360 40b261852cc59a78fa3a98ab90924462 459 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 1.2E-142 T 11-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 AL543_18360 40b261852cc59a78fa3a98ab90924462 459 SMART SM00840 341 402 5.4E-27 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 AL543_18360 40b261852cc59a78fa3a98ab90924462 459 Gene3D G3DSA:3.40.50.620 1 305 5.1E-139 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL543_00250 8281c1af384fa5d598ca76c8627c0a8a 565 Gene3D G3DSA:3.40.50.300 9 222 8.0E-43 T 11-10-2018 AL543_00250 8281c1af384fa5d598ca76c8627c0a8a 565 Gene3D G3DSA:3.30.420.240 338 546 5.2E-34 T 11-10-2018 AL543_17165 3c2dc3057ba18483e045616e48900916 461 Gene3D G3DSA:1.10.275.10 6 133 1.8E-50 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal AL543_17165 3c2dc3057ba18483e045616e48900916 461 PRINTS PR00149 Fumarate lyase superfamily signature 129 147 1.2E-31 T 11-10-2018 IPR000362 Fumarate lyase family AL543_17165 3c2dc3057ba18483e045616e48900916 461 PRINTS PR00149 Fumarate lyase superfamily signature 266 293 1.2E-31 T 11-10-2018 IPR000362 Fumarate lyase family AL543_17165 3c2dc3057ba18483e045616e48900916 461 PRINTS PR00149 Fumarate lyase superfamily signature 175 193 1.2E-31 T 11-10-2018 IPR000362 Fumarate lyase family AL543_17165 3c2dc3057ba18483e045616e48900916 461 PRINTS PR00149 Fumarate lyase superfamily signature 312 328 1.2E-31 T 11-10-2018 IPR000362 Fumarate lyase family AL543_17165 3c2dc3057ba18483e045616e48900916 461 Gene3D G3DSA:1.20.200.10 134 400 2.6E-97 T 11-10-2018 AL543_17165 3c2dc3057ba18483e045616e48900916 461 Hamap MF_00743 Fumarate hydratase class II [fumC]. 5 457 74.437 T 11-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AL543_17165 3c2dc3057ba18483e045616e48900916 461 Pfam PF00206 Lyase 13 337 2.2E-94 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal AL543_17165 3c2dc3057ba18483e045616e48900916 461 PRINTS PR00145 Argininosuccinate lyase family signature 170 190 2.3E-6 T 11-10-2018 AL543_17165 3c2dc3057ba18483e045616e48900916 461 PRINTS PR00145 Argininosuccinate lyase family signature 312 328 2.3E-6 T 11-10-2018 AL543_17165 3c2dc3057ba18483e045616e48900916 461 PRINTS PR00145 Argininosuccinate lyase family signature 128 150 2.3E-6 T 11-10-2018 AL543_17165 3c2dc3057ba18483e045616e48900916 461 Gene3D G3DSA:1.10.40.30 403 461 5.5E-19 T 11-10-2018 AL543_17165 3c2dc3057ba18483e045616e48900916 461 SUPERFAMILY SSF48557 5 455 2.04E-137 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 AL543_17165 3c2dc3057ba18483e045616e48900916 461 ProSitePatterns PS00163 Fumarate lyases signature. 312 321 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AL543_17165 3c2dc3057ba18483e045616e48900916 461 Pfam PF10415 Fumarase C C-terminus 403 455 3.8E-18 T 11-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AL543_06825 b5bbe3fa1ff0e8dbb2de39baa6c25a25 495 Gene3D G3DSA:3.40.1190.10 109 342 2.2E-79 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL543_06825 b5bbe3fa1ff0e8dbb2de39baa6c25a25 495 Pfam PF08245 Mur ligase middle domain 117 318 1.3E-50 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AL543_06825 b5bbe3fa1ff0e8dbb2de39baa6c25a25 495 SUPERFAMILY SSF53244 340 491 1.83E-48 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL543_06825 b5bbe3fa1ff0e8dbb2de39baa6c25a25 495 SUPERFAMILY SSF63418 8 108 2.09E-21 T 11-10-2018 IPR035911 MurE/MurF, N-terminal AL543_06825 b5bbe3fa1ff0e8dbb2de39baa6c25a25 495 Pfam PF01225 Mur ligase family, catalytic domain 27 105 6.3E-12 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AL543_06825 b5bbe3fa1ff0e8dbb2de39baa6c25a25 495 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 5 491 33.898 T 11-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 AL543_06825 b5bbe3fa1ff0e8dbb2de39baa6c25a25 495 SUPERFAMILY SSF53623 111 338 1.16E-72 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL543_06825 b5bbe3fa1ff0e8dbb2de39baa6c25a25 495 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 26 491 9.1E-180 T 11-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 AL543_06825 b5bbe3fa1ff0e8dbb2de39baa6c25a25 495 Pfam PF02875 Mur ligase family, glutamate ligase domain 341 424 7.7E-25 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 AL543_06825 b5bbe3fa1ff0e8dbb2de39baa6c25a25 495 Gene3D G3DSA:3.40.1390.10 4 108 8.9E-31 T 11-10-2018 AL543_06825 b5bbe3fa1ff0e8dbb2de39baa6c25a25 495 Gene3D G3DSA:3.90.190.20 345 494 1.6E-55 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL543_10525 cf0e8defd1e68182ec3528377e54a837 1145 SMART SM00388 788 853 1.3E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_10525 cf0e8defd1e68182ec3528377e54a837 1145 Gene3D G3DSA:3.40.50.2300 1017 1145 9.7E-18 T 11-10-2018 AL543_10525 cf0e8defd1e68182ec3528377e54a837 1145 Gene3D G3DSA:1.20.1730.10 32 503 2.5E-7 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily AL543_10525 cf0e8defd1e68182ec3528377e54a837 1145 Pfam PF12860 PAS fold 634 748 3.0E-44 T 11-10-2018 AL543_10525 cf0e8defd1e68182ec3528377e54a837 1145 SMART SM00448 1028 1141 6.5E-17 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_10525 cf0e8defd1e68182ec3528377e54a837 1145 SUPERFAMILY SSF52172 1027 1144 2.7E-19 T 11-10-2018 IPR011006 CheY-like superfamily AL543_10525 cf0e8defd1e68182ec3528377e54a837 1145 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 898 1003 5.6E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_10525 cf0e8defd1e68182ec3528377e54a837 1145 Pfam PF00512 His Kinase A (phospho-acceptor) domain 788 853 3.4E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_10525 cf0e8defd1e68182ec3528377e54a837 1145 SUPERFAMILY SSF47384 773 854 8.44E-15 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL543_10525 cf0e8defd1e68182ec3528377e54a837 1145 SUPERFAMILY SSF55785 626 741 2.72E-9 T 11-10-2018 IPR035965 PAS domain superfamily AL543_10525 cf0e8defd1e68182ec3528377e54a837 1145 Pfam PF00072 Response regulator receiver domain 1030 1141 1.3E-12 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_10525 cf0e8defd1e68182ec3528377e54a837 1145 SMART SM00387 897 1006 1.4E-27 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_10525 cf0e8defd1e68182ec3528377e54a837 1145 Gene3D G3DSA:3.30.565.10 860 1012 6.6E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_10525 cf0e8defd1e68182ec3528377e54a837 1145 Gene3D G3DSA:1.10.287.130 750 851 1.1E-14 T 11-10-2018 AL543_10525 cf0e8defd1e68182ec3528377e54a837 1145 Gene3D G3DSA:3.30.450.20 616 749 2.0E-12 T 11-10-2018 AL543_10525 cf0e8defd1e68182ec3528377e54a837 1145 PRINTS PR00344 Bacterial sensor protein C-terminal signature 990 1003 3.6E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_10525 cf0e8defd1e68182ec3528377e54a837 1145 PRINTS PR00344 Bacterial sensor protein C-terminal signature 933 947 3.6E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_10525 cf0e8defd1e68182ec3528377e54a837 1145 PRINTS PR00344 Bacterial sensor protein C-terminal signature 966 984 3.6E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_10525 cf0e8defd1e68182ec3528377e54a837 1145 PRINTS PR00344 Bacterial sensor protein C-terminal signature 951 961 3.6E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_10525 cf0e8defd1e68182ec3528377e54a837 1145 SUPERFAMILY SSF55874 842 1004 1.57E-37 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_06235 d93122382e234fe573dd9ff24cd85dbc 147 Pfam PF05618 Putative ATP-dependant zinc protease 6 141 1.1E-47 T 11-10-2018 AL543_06235 d93122382e234fe573dd9ff24cd85dbc 147 SUPERFAMILY SSF50630 6 140 1.92E-46 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily AL543_06235 d93122382e234fe573dd9ff24cd85dbc 147 Gene3D G3DSA:2.40.70.10 3 133 4.2E-35 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily AL543_08725 f5c55dcbd148758882727a8dcc5709d5 149 Pfam PF10980 Protein of unknown function (DUF2787) 15 138 8.6E-33 T 11-10-2018 IPR021248 Protein of unknown function DUF2787 AL543_08725 f5c55dcbd148758882727a8dcc5709d5 149 Gene3D G3DSA:3.10.450.430 1 141 3.3E-26 T 11-10-2018 AL543_19265 9d40eab8e96aef07521757806f3147b9 296 PIRSF PIRSF016020 4 296 9.0E-64 T 11-10-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 AL543_19265 9d40eab8e96aef07521757806f3147b9 296 SUPERFAMILY SSF74650 7 284 8.79E-74 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 AL543_19265 9d40eab8e96aef07521757806f3147b9 296 Gene3D G3DSA:2.70.98.10 1 294 8.7E-89 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AL543_19265 9d40eab8e96aef07521757806f3147b9 296 Pfam PF01263 Aldose 1-epimerase 27 292 9.0E-53 T 11-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 AL543_06555 4e38b09b87cdfca40b3e7e9f37902a29 241 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 1.1E-119 T 11-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 AL543_06555 4e38b09b87cdfca40b3e7e9f37902a29 241 Pfam PF01048 Phosphorylase superfamily 15 222 1.5E-40 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AL543_06555 4e38b09b87cdfca40b3e7e9f37902a29 241 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 11-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL543_06555 4e38b09b87cdfca40b3e7e9f37902a29 241 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 51.848 T 11-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 AL543_06555 4e38b09b87cdfca40b3e7e9f37902a29 241 SUPERFAMILY SSF53167 3 235 1.7E-94 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 AL543_06555 4e38b09b87cdfca40b3e7e9f37902a29 241 Gene3D G3DSA:3.40.50.1580 1 239 5.5E-79 T 11-10-2018 AL543_08695 c7e710d8b7e031fda6f942956d38f165 369 SUPERFAMILY SSF53335 11 367 5.96E-55 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL543_08695 c7e710d8b7e031fda6f942956d38f165 369 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 11 367 6.9E-187 T 11-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 AL543_08695 c7e710d8b7e031fda6f942956d38f165 369 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 301 330 - T 11-10-2018 IPR030390 RNA methyltransferase TrmA, active site AL543_08695 c7e710d8b7e031fda6f942956d38f165 369 Gene3D G3DSA:3.40.50.150 13 363 3.8E-139 T 11-10-2018 AL543_08695 c7e710d8b7e031fda6f942956d38f165 369 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 11 367 9.2E-184 T 11-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 AL543_08695 c7e710d8b7e031fda6f942956d38f165 369 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 368 43.931 T 11-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 AL543_08695 c7e710d8b7e031fda6f942956d38f165 369 Gene3D G3DSA:3.40.1350.30 45 189 3.8E-139 T 11-10-2018 AL543_08695 c7e710d8b7e031fda6f942956d38f165 369 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 350 360 - T 11-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site AL543_07585 21b06c9766e39350a255444bc6e0886e 336 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 273 285 - T 11-10-2018 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL543_07585 21b06c9766e39350a255444bc6e0886e 336 PIRSF PIRSF500210 1 335 3.3E-128 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL543_07585 21b06c9766e39350a255444bc6e0886e 336 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 5 333 43.374 T 11-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL543_07585 21b06c9766e39350a255444bc6e0886e 336 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 6 197 1.1E-77 T 11-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL543_07585 21b06c9766e39350a255444bc6e0886e 336 PIRSF PIRSF000904 1 335 5.7E-125 T 11-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL543_07585 21b06c9766e39350a255444bc6e0886e 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 208 235 1.2E-77 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL543_07585 21b06c9766e39350a255444bc6e0886e 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 30 57 1.2E-77 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL543_07585 21b06c9766e39350a255444bc6e0886e 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 182 205 1.2E-77 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL543_07585 21b06c9766e39350a255444bc6e0886e 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 67 93 1.2E-77 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL543_07585 21b06c9766e39350a255444bc6e0886e 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 307 332 1.2E-77 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL543_07585 21b06c9766e39350a255444bc6e0886e 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 151 174 1.2E-77 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL543_07585 21b06c9766e39350a255444bc6e0886e 336 Gene3D G3DSA:3.30.540.10 4 198 6.4E-77 T 11-10-2018 AL543_07585 21b06c9766e39350a255444bc6e0886e 336 SUPERFAMILY SSF56655 2 331 2.54E-114 T 11-10-2018 AL543_07585 21b06c9766e39350a255444bc6e0886e 336 Gene3D G3DSA:3.40.190.80 200 336 8.4E-61 T 11-10-2018 AL543_00845 2182fc9d02f7ac4b58dced68b1295252 214 Pfam PF01470 Pyroglutamyl peptidase 4 201 9.8E-74 T 11-10-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like MetaCyc: PWY-7942 AL543_00845 2182fc9d02f7ac4b58dced68b1295252 214 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 4 212 2.6E-77 T 11-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 AL543_00845 2182fc9d02f7ac4b58dced68b1295252 214 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 2 200 37.628 T 11-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 AL543_00845 2182fc9d02f7ac4b58dced68b1295252 214 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 131 145 - T 11-10-2018 IPR033694 Pyroglutamyl peptidase I, Cys active site MetaCyc: PWY-7942 AL543_00845 2182fc9d02f7ac4b58dced68b1295252 214 PIRSF PIRSF015592 2 212 1.0E-76 T 11-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 AL543_00845 2182fc9d02f7ac4b58dced68b1295252 214 SUPERFAMILY SSF53182 3 205 4.71E-67 T 11-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 AL543_00845 2182fc9d02f7ac4b58dced68b1295252 214 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 4 27 4.4E-43 T 11-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 AL543_00845 2182fc9d02f7ac4b58dced68b1295252 214 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 162 174 4.4E-43 T 11-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 AL543_00845 2182fc9d02f7ac4b58dced68b1295252 214 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 81 101 4.4E-43 T 11-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 AL543_00845 2182fc9d02f7ac4b58dced68b1295252 214 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 133 149 4.4E-43 T 11-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 AL543_00845 2182fc9d02f7ac4b58dced68b1295252 214 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 63 75 4.4E-43 T 11-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 AL543_00845 2182fc9d02f7ac4b58dced68b1295252 214 Gene3D G3DSA:3.40.630.20 2 214 1.6E-77 T 11-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 AL543_11280 dd9165e54b41365224f7ca32bcb2030b 287 Gene3D G3DSA:1.10.10.10 3 79 1.9E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_11280 dd9165e54b41365224f7ca32bcb2030b 287 Pfam PF01380 SIS domain 124 250 4.9E-16 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL543_11280 dd9165e54b41365224f7ca32bcb2030b 287 Gene3D G3DSA:3.40.50.10490 94 273 8.7E-36 T 11-10-2018 AL543_11280 dd9165e54b41365224f7ca32bcb2030b 287 SUPERFAMILY SSF46689 5 79 5.38E-18 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_11280 dd9165e54b41365224f7ca32bcb2030b 287 Pfam PF01418 Helix-turn-helix domain, rpiR family 7 78 2.5E-15 T 11-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AL543_11280 dd9165e54b41365224f7ca32bcb2030b 287 SUPERFAMILY SSF53697 95 264 8.09E-35 T 11-10-2018 AL543_15500 4554f943a2e7646247233dcea2043c26 341 Pfam PF02277 Phosphoribosyltransferase 2 339 3.9E-128 T 11-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 AL543_15500 4554f943a2e7646247233dcea2043c26 341 SUPERFAMILY SSF52733 2 340 2.09E-112 T 11-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 AL543_15500 4554f943a2e7646247233dcea2043c26 341 Gene3D G3DSA:3.40.50.10210 51 322 1.2E-124 T 11-10-2018 AL543_15500 4554f943a2e7646247233dcea2043c26 341 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 1 341 37.085 T 11-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 AL543_15500 4554f943a2e7646247233dcea2043c26 341 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 3 339 1.7E-135 T 11-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 AL543_15500 4554f943a2e7646247233dcea2043c26 341 Gene3D G3DSA:1.10.1610.10 13 339 1.2E-124 T 11-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 AL543_19710 1b4407e6a9e65ab403b3e648724f0e5e 1122 Pfam PF12833 Helix-turn-helix domain 1042 1117 1.4E-23 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL543_19710 1b4407e6a9e65ab403b3e648724f0e5e 1122 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 1072 1113 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL543_19710 1b4407e6a9e65ab403b3e648724f0e5e 1122 SUPERFAMILY SSF46689 1071 1118 2.06E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_19710 1b4407e6a9e65ab403b3e648724f0e5e 1122 SUPERFAMILY SSF55874 859 980 1.79E-6 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_19710 1b4407e6a9e65ab403b3e648724f0e5e 1122 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 1086 1101 7.0E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL543_19710 1b4407e6a9e65ab403b3e648724f0e5e 1122 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 1101 1117 7.0E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL543_19710 1b4407e6a9e65ab403b3e648724f0e5e 1122 Gene3D G3DSA:2.130.10.10 46 320 3.9E-19 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AL543_19710 1b4407e6a9e65ab403b3e648724f0e5e 1122 Gene3D G3DSA:2.130.10.10 321 574 8.1E-21 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AL543_19710 1b4407e6a9e65ab403b3e648724f0e5e 1122 Gene3D G3DSA:2.60.40.10 624 739 7.0E-7 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL543_19710 1b4407e6a9e65ab403b3e648724f0e5e 1122 Gene3D G3DSA:1.10.10.60 1013 1122 2.1E-28 T 11-10-2018 AL543_19710 1b4407e6a9e65ab403b3e648724f0e5e 1122 SUPERFAMILY SSF63829 211 453 4.25E-11 T 11-10-2018 AL543_19710 1b4407e6a9e65ab403b3e648724f0e5e 1122 SMART SM00342 1035 1117 1.1E-27 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL543_19710 1b4407e6a9e65ab403b3e648724f0e5e 1122 Gene3D G3DSA:3.30.565.10 849 990 3.8E-5 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_11705 b53242a5ffd1dd637312983423a5478e 147 Gene3D G3DSA:1.10.10.410 91 147 1.8E-17 T 11-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal AL543_11705 b53242a5ffd1dd637312983423a5478e 147 SUPERFAMILY SSF89095 1 146 6.28E-43 T 11-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 AL543_11705 b53242a5ffd1dd637312983423a5478e 147 Gene3D G3DSA:1.10.1510.10 1 90 3.7E-28 T 11-10-2018 AL543_11705 b53242a5ffd1dd637312983423a5478e 147 Pfam PF09424 Yqey-like protein 5 146 2.6E-55 T 11-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 AL543_10830 5b0ae39998797c21cc9c1a775f702008 653 SMART SM00853 475 612 9.1E-19 T 11-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 AL543_10830 5b0ae39998797c21cc9c1a775f702008 653 Pfam PF08676 MutL C terminal dimerisation domain 472 609 3.3E-31 T 11-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 AL543_10830 5b0ae39998797c21cc9c1a775f702008 653 Gene3D G3DSA:3.30.230.10 217 329 4.2E-40 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL543_10830 5b0ae39998797c21cc9c1a775f702008 653 SUPERFAMILY SSF54211 191 329 1.67E-37 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL543_10830 5b0ae39998797c21cc9c1a775f702008 653 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 651 26.218 T 11-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 AL543_10830 5b0ae39998797c21cc9c1a775f702008 653 SMART SM01340 212 330 3.3E-57 T 11-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 AL543_10830 5b0ae39998797c21cc9c1a775f702008 653 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 119 2.0E-12 T 11-10-2018 AL543_10830 5b0ae39998797c21cc9c1a775f702008 653 Gene3D G3DSA:3.30.1370.100 516 606 8.1E-55 T 11-10-2018 AL543_10830 5b0ae39998797c21cc9c1a775f702008 653 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 310 2.8E-103 T 11-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 AL543_10830 5b0ae39998797c21cc9c1a775f702008 653 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 11-10-2018 IPR014762 DNA mismatch repair, conserved site AL543_10830 5b0ae39998797c21cc9c1a775f702008 653 SUPERFAMILY SSF118116 472 648 3.66E-40 T 11-10-2018 IPR037198 MutL, C-terminal domain superfamily AL543_10830 5b0ae39998797c21cc9c1a775f702008 653 SUPERFAMILY SSF55874 1 209 4.32E-55 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_10830 5b0ae39998797c21cc9c1a775f702008 653 Gene3D G3DSA:2.30.42.20 472 650 8.1E-55 T 11-10-2018 AL543_10830 5b0ae39998797c21cc9c1a775f702008 653 Gene3D G3DSA:3.30.565.10 1 216 1.5E-72 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_10830 5b0ae39998797c21cc9c1a775f702008 653 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 213 329 1.7E-39 T 11-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 AL543_02785 a0a99fee33b6140022ce66e8fa3de3e6 414 Pfam PF07690 Major Facilitator Superfamily 26 367 5.7E-41 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL543_02785 a0a99fee33b6140022ce66e8fa3de3e6 414 SUPERFAMILY SSF103473 22 399 7.19E-55 T 11-10-2018 IPR036259 MFS transporter superfamily AL543_02785 a0a99fee33b6140022ce66e8fa3de3e6 414 Gene3D G3DSA:1.20.1720.10 23 397 5.3E-96 T 11-10-2018 AL543_17955 af273421d5110ec194eeeab8a03d86aa 426 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 420 7.2E-156 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AL543_17955 af273421d5110ec194eeeab8a03d86aa 426 SUPERFAMILY SSF55205 1 424 1.23E-144 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AL543_17955 af273421d5110ec194eeeab8a03d86aa 426 Gene3D G3DSA:3.65.10.10 20 224 7.0E-166 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 AL543_17955 af273421d5110ec194eeeab8a03d86aa 426 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 424 4.1E-144 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AL543_17955 af273421d5110ec194eeeab8a03d86aa 426 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 426 34.285 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AL543_17955 af273421d5110ec194eeeab8a03d86aa 426 Gene3D G3DSA:3.65.10.10 242 419 7.0E-166 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 AL543_17955 af273421d5110ec194eeeab8a03d86aa 426 PIRSF PIRSF000505 2 426 5.7E-157 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AL543_17955 af273421d5110ec194eeeab8a03d86aa 426 ProSitePatterns PS00885 EPSP synthase signature 2. 339 357 - T 11-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AL543_17955 af273421d5110ec194eeeab8a03d86aa 426 ProSitePatterns PS00104 EPSP synthase signature 1. 90 104 - T 11-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AL543_11685 942c417028eca436323bbe33fc6456dd 586 SUPERFAMILY SSF55729 312 452 4.56E-22 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL543_11685 942c417028eca436323bbe33fc6456dd 586 Pfam PF13444 Acetyltransferase (GNAT) domain 329 430 3.2E-21 T 11-10-2018 AL543_11685 942c417028eca436323bbe33fc6456dd 586 SUPERFAMILY SSF69593 56 248 1.03E-7 T 11-10-2018 AL543_11685 942c417028eca436323bbe33fc6456dd 586 Gene3D G3DSA:3.40.630.30 314 456 2.3E-6 T 11-10-2018 AL543_11685 942c417028eca436323bbe33fc6456dd 586 SMART SM00563 75 199 3.2E-11 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AL543_11685 942c417028eca436323bbe33fc6456dd 586 Pfam PF01553 Acyltransferase 66 196 2.6E-5 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AL543_04820 e3fd7e29693dac63006d5c87a027918e 360 Gene3D G3DSA:1.20.58.1130 7 205 1.5E-87 T 11-10-2018 AL543_04820 e3fd7e29693dac63006d5c87a027918e 360 Pfam PF01699 Sodium/calcium exchanger protein 4 142 2.9E-30 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AL543_04820 e3fd7e29693dac63006d5c87a027918e 360 Pfam PF01699 Sodium/calcium exchanger protein 173 316 1.1E-31 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AL543_04820 e3fd7e29693dac63006d5c87a027918e 360 Gene3D G3DSA:1.20.1420.30 33 309 1.5E-87 T 11-10-2018 AL543_04820 e3fd7e29693dac63006d5c87a027918e 360 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 5 311 8.6E-82 T 11-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 AL543_02050 36f851a2a409271a48036e1a6fe6f531 592 Gene3D G3DSA:3.30.750.24 439 558 1.5E-20 T 11-10-2018 IPR036513 STAS domain superfamily AL543_02050 36f851a2a409271a48036e1a6fe6f531 592 SUPERFAMILY SSF52091 449 541 3.73E-12 T 11-10-2018 IPR036513 STAS domain superfamily AL543_02050 36f851a2a409271a48036e1a6fe6f531 592 Pfam PF00916 Sulfate permease family 27 392 1.2E-80 T 11-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AL543_02050 36f851a2a409271a48036e1a6fe6f531 592 Pfam PF01740 STAS domain 447 543 5.4E-16 T 11-10-2018 IPR002645 STAS domain AL543_06095 8a511f025151523fb106cf917d9b3bac 169 SMART SM00935 15 169 1.0E-42 T 11-10-2018 IPR005632 Chaperone protein Skp GO:0051082 AL543_06095 8a511f025151523fb106cf917d9b3bac 169 Gene3D G3DSA:3.30.910.20 25 169 2.4E-36 T 11-10-2018 IPR024930 Skp domain superfamily AL543_06095 8a511f025151523fb106cf917d9b3bac 169 PIRSF PIRSF002094 1 169 1.0E-40 T 11-10-2018 IPR005632 Chaperone protein Skp GO:0051082 AL543_06095 8a511f025151523fb106cf917d9b3bac 169 Pfam PF03938 Outer membrane protein (OmpH-like) 13 167 1.6E-25 T 11-10-2018 IPR005632 Chaperone protein Skp GO:0051082 AL543_06095 8a511f025151523fb106cf917d9b3bac 169 SUPERFAMILY SSF111384 26 168 6.8E-32 T 11-10-2018 AL543_18030 32021b0c73621d6ab087089e06cc07cf 264 Gene3D G3DSA:3.20.20.450 7 262 3.5E-42 T 11-10-2018 IPR035919 EAL domain superfamily AL543_18030 32021b0c73621d6ab087089e06cc07cf 264 SUPERFAMILY SSF141868 26 261 1.03E-40 T 11-10-2018 IPR035919 EAL domain superfamily AL543_18030 32021b0c73621d6ab087089e06cc07cf 264 Pfam PF00563 EAL domain 29 253 9.6E-38 T 11-10-2018 IPR001633 EAL domain AL543_18030 32021b0c73621d6ab087089e06cc07cf 264 SMART SM00052 12 258 4.5E-11 T 11-10-2018 IPR001633 EAL domain AL543_12215 0ed5b133e2f7a8820af8ca76346273af 1129 Pfam PF00512 His Kinase A (phospho-acceptor) domain 460 525 3.5E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_12215 0ed5b133e2f7a8820af8ca76346273af 1129 Gene3D G3DSA:1.10.287.130 445 527 5.2E-20 T 11-10-2018 AL543_12215 0ed5b133e2f7a8820af8ca76346273af 1129 Gene3D G3DSA:3.40.50.2300 719 862 4.2E-41 T 11-10-2018 AL543_12215 0ed5b133e2f7a8820af8ca76346273af 1129 SMART SM00388 459 527 4.6E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_12215 0ed5b133e2f7a8820af8ca76346273af 1129 Gene3D G3DSA:3.30.450.20 863 955 8.5E-7 T 11-10-2018 AL543_12215 0ed5b133e2f7a8820af8ca76346273af 1129 Gene3D G3DSA:3.30.565.10 528 689 5.0E-44 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_12215 0ed5b133e2f7a8820af8ca76346273af 1129 PRINTS PR00344 Bacterial sensor protein C-terminal signature 627 637 1.3E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_12215 0ed5b133e2f7a8820af8ca76346273af 1129 PRINTS PR00344 Bacterial sensor protein C-terminal signature 609 623 1.3E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_12215 0ed5b133e2f7a8820af8ca76346273af 1129 PRINTS PR00344 Bacterial sensor protein C-terminal signature 668 681 1.3E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_12215 0ed5b133e2f7a8820af8ca76346273af 1129 PRINTS PR00344 Bacterial sensor protein C-terminal signature 644 662 1.3E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_12215 0ed5b133e2f7a8820af8ca76346273af 1129 Pfam PF00072 Response regulator receiver domain 725 835 5.3E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_12215 0ed5b133e2f7a8820af8ca76346273af 1129 SMART SM00448 722 835 1.3E-45 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_12215 0ed5b133e2f7a8820af8ca76346273af 1129 Gene3D G3DSA:1.10.8.500 376 430 7.5E-17 T 11-10-2018 AL543_12215 0ed5b133e2f7a8820af8ca76346273af 1129 Pfam PF13188 PAS domain 879 914 7.8E-4 T 11-10-2018 IPR000014 PAS domain AL543_12215 0ed5b133e2f7a8820af8ca76346273af 1129 SUPERFAMILY SSF52172 717 846 2.56E-41 T 11-10-2018 IPR011006 CheY-like superfamily AL543_12215 0ed5b133e2f7a8820af8ca76346273af 1129 SMART SM00304 377 430 4.8E-12 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_12215 0ed5b133e2f7a8820af8ca76346273af 1129 Pfam PF00672 HAMP domain 379 427 2.2E-12 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_12215 0ed5b133e2f7a8820af8ca76346273af 1129 SUPERFAMILY SSF55785 861 933 4.95E-7 T 11-10-2018 IPR035965 PAS domain superfamily AL543_12215 0ed5b133e2f7a8820af8ca76346273af 1129 SMART SM00091 873 938 0.0027 T 11-10-2018 IPR000014 PAS domain AL543_12215 0ed5b133e2f7a8820af8ca76346273af 1129 SUPERFAMILY SSF47384 446 527 1.96E-18 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL543_12215 0ed5b133e2f7a8820af8ca76346273af 1129 Gene3D G3DSA:3.30.450.20 262 358 6.3E-8 T 11-10-2018 AL543_12215 0ed5b133e2f7a8820af8ca76346273af 1129 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 574 683 5.4E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_12215 0ed5b133e2f7a8820af8ca76346273af 1129 SMART SM00387 573 684 2.2E-38 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_12215 0ed5b133e2f7a8820af8ca76346273af 1129 SUPERFAMILY SSF158472 378 428 7.98E-11 T 11-10-2018 AL543_12215 0ed5b133e2f7a8820af8ca76346273af 1129 SUPERFAMILY SSF55874 516 688 2.62E-46 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_19615 df9991e9dee8b50323676f49d32bb02f 164 SMART SM00260 16 153 2.2E-49 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AL543_19615 df9991e9dee8b50323676f49d32bb02f 164 Gene3D G3DSA:2.40.50.180 39 148 5.2E-43 T 11-10-2018 AL543_19615 df9991e9dee8b50323676f49d32bb02f 164 Pfam PF01584 CheW-like domain 20 156 1.2E-39 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AL543_19615 df9991e9dee8b50323676f49d32bb02f 164 SUPERFAMILY SSF50341 14 158 2.35E-41 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AL543_19615 df9991e9dee8b50323676f49d32bb02f 164 Gene3D G3DSA:2.30.30.40 22 147 5.2E-43 T 11-10-2018 AL543_00600 324162ae4f9b04d8f688c80aec8f60f9 162 Gene3D G3DSA:3.10.129.10 2 160 1.3E-42 T 11-10-2018 AL543_00600 324162ae4f9b04d8f688c80aec8f60f9 162 Pfam PF03061 Thioesterase superfamily 22 95 6.0E-17 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AL543_00600 324162ae4f9b04d8f688c80aec8f60f9 162 SUPERFAMILY SSF54637 5 150 3.59E-40 T 11-10-2018 IPR029069 HotDog domain superfamily AL543_10495 d74399e377002b6f16f926316f46f5ba 149 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 21 143 7.0E-65 T 11-10-2018 AL543_10495 d74399e377002b6f16f926316f46f5ba 149 SUPERFAMILY SSF52304 4 145 1.1E-62 T 11-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL543_10495 d74399e377002b6f16f926316f46f5ba 149 Gene3D G3DSA:3.40.50.9100 1 149 4.0E-67 T 11-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL543_10495 d74399e377002b6f16f926316f46f5ba 149 Pfam PF01220 Dehydroquinase class II 6 142 9.6E-63 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL543_10495 d74399e377002b6f16f926316f46f5ba 149 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 145 6.6E-67 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL543_10495 d74399e377002b6f16f926316f46f5ba 149 PIRSF PIRSF001399 3 149 1.8E-60 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL543_10495 d74399e377002b6f16f926316f46f5ba 149 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 149 75.598 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL543_10495 d74399e377002b6f16f926316f46f5ba 149 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 11-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL543_02250 6b91e75e2f70166aba35864758588726 450 Gene3D G3DSA:1.10.8.60 314 389 8.9E-14 T 11-10-2018 AL543_02250 6b91e75e2f70166aba35864758588726 450 Pfam PF00158 Sigma-54 interaction domain 145 308 1.5E-64 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL543_02250 6b91e75e2f70166aba35864758588726 450 SMART SM00382 165 305 1.1E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_02250 6b91e75e2f70166aba35864758588726 450 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 231 246 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL543_02250 6b91e75e2f70166aba35864758588726 450 SUPERFAMILY SSF52172 3 189 4.55E-40 T 11-10-2018 IPR011006 CheY-like superfamily AL543_02250 6b91e75e2f70166aba35864758588726 450 Gene3D G3DSA:3.40.50.2300 1 134 5.8E-34 T 11-10-2018 AL543_02250 6b91e75e2f70166aba35864758588726 450 SUPERFAMILY SSF52540 145 367 7.34E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_02250 6b91e75e2f70166aba35864758588726 450 SUPERFAMILY SSF46689 388 440 9.41E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_02250 6b91e75e2f70166aba35864758588726 450 SMART SM00448 4 115 1.9E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_02250 6b91e75e2f70166aba35864758588726 450 Gene3D G3DSA:1.10.10.60 393 439 4.5E-11 T 11-10-2018 AL543_02250 6b91e75e2f70166aba35864758588726 450 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 351 360 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AL543_02250 6b91e75e2f70166aba35864758588726 450 Gene3D G3DSA:3.40.50.300 135 313 2.0E-58 T 11-10-2018 AL543_02250 6b91e75e2f70166aba35864758588726 450 Pfam PF02954 Bacterial regulatory protein, Fis family 400 438 2.6E-10 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL543_02250 6b91e75e2f70166aba35864758588726 450 Pfam PF00072 Response regulator receiver domain 6 115 9.8E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_05750 615cd192317c60ac3d1fa45552287bae 487 ProSitePatterns PS00149 Sulfatases signature 2. 99 109 - T 11-10-2018 IPR024607 Sulfatase, conserved site AL543_05750 615cd192317c60ac3d1fa45552287bae 487 Gene3D G3DSA:3.40.720.10 6 403 2.2E-111 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AL543_05750 615cd192317c60ac3d1fa45552287bae 487 ProSitePatterns PS00523 Sulfatases signature 1. 52 64 - T 11-10-2018 IPR024607 Sulfatase, conserved site AL543_05750 615cd192317c60ac3d1fa45552287bae 487 Pfam PF00884 Sulfatase 6 376 6.1E-70 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 AL543_05750 615cd192317c60ac3d1fa45552287bae 487 SUPERFAMILY SSF53649 3 483 6.22E-119 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AL543_05750 615cd192317c60ac3d1fa45552287bae 487 Pfam PF16385 Domain of unknown function 382 477 5.1E-20 T 11-10-2018 IPR032158 Domain of unknown function DUF4994 AL543_05750 615cd192317c60ac3d1fa45552287bae 487 Gene3D G3DSA:3.30.1120.10 404 473 2.2E-111 T 11-10-2018 AL543_06490 f159fb61f38b1bae829f192fbc4152bc 1020 SUPERFAMILY SSF51445 332 622 8.75E-102 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AL543_06490 f159fb61f38b1bae829f192fbc4152bc 1020 Pfam PF16353 Domain of unknown function(DUF4981) 634 719 3.3E-14 T 11-10-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AL543_06490 f159fb61f38b1bae829f192fbc4152bc 1020 Hamap MF_01687 Beta-galactosidase [lacZ]. 2 1019 16.647 T 11-10-2018 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase GO:0016798 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AL543_06490 f159fb61f38b1bae829f192fbc4152bc 1020 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 333 626 6.7E-111 T 11-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 AL543_06490 f159fb61f38b1bae829f192fbc4152bc 1020 SUPERFAMILY SSF74650 731 1017 4.71E-96 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 AL543_06490 f159fb61f38b1bae829f192fbc4152bc 1020 SUPERFAMILY SSF49303 619 721 1.39E-22 T 11-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily AL543_06490 f159fb61f38b1bae829f192fbc4152bc 1020 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 49 215 9.2E-55 T 11-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AL543_06490 f159fb61f38b1bae829f192fbc4152bc 1020 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 383 408 - T 11-10-2018 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AL543_06490 f159fb61f38b1bae829f192fbc4152bc 1020 SUPERFAMILY SSF49785 9 215 6.94E-64 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily AL543_06490 f159fb61f38b1bae829f192fbc4152bc 1020 PRINTS PR00132 Glycosyl hydrolase family 2 signature 445 460 3.9E-38 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AL543_06490 f159fb61f38b1bae829f192fbc4152bc 1020 PRINTS PR00132 Glycosyl hydrolase family 2 signature 342 356 3.9E-38 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AL543_06490 f159fb61f38b1bae829f192fbc4152bc 1020 PRINTS PR00132 Glycosyl hydrolase family 2 signature 143 158 3.9E-38 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AL543_06490 f159fb61f38b1bae829f192fbc4152bc 1020 PRINTS PR00132 Glycosyl hydrolase family 2 signature 373 391 3.9E-38 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AL543_06490 f159fb61f38b1bae829f192fbc4152bc 1020 PRINTS PR00132 Glycosyl hydrolase family 2 signature 529 544 3.9E-38 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AL543_06490 f159fb61f38b1bae829f192fbc4152bc 1020 SUPERFAMILY SSF49303 218 331 2.16E-22 T 11-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily AL543_06490 f159fb61f38b1bae829f192fbc4152bc 1020 Pfam PF02929 Beta galactosidase small chain 748 1016 4.1E-68 T 11-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AL543_06490 f159fb61f38b1bae829f192fbc4152bc 1020 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 445 459 - T 11-10-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AL543_06490 f159fb61f38b1bae829f192fbc4152bc 1020 Pfam PF00703 Glycosyl hydrolases family 2 218 331 4.7E-15 T 11-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AL543_06490 f159fb61f38b1bae829f192fbc4152bc 1020 Gene3D G3DSA:2.60.120.260 7 216 1.8E-81 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily AL543_06490 f159fb61f38b1bae829f192fbc4152bc 1020 SMART SM01038 744 1017 5.7E-116 T 11-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AL543_06490 f159fb61f38b1bae829f192fbc4152bc 1020 Gene3D G3DSA:2.70.98.10 728 1019 8.4E-96 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AL543_06490 f159fb61f38b1bae829f192fbc4152bc 1020 Gene3D G3DSA:2.60.40.10 623 722 9.3E-17 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL543_06490 f159fb61f38b1bae829f192fbc4152bc 1020 Gene3D G3DSA:2.60.40.10 217 331 8.2E-25 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL543_06490 f159fb61f38b1bae829f192fbc4152bc 1020 Gene3D G3DSA:3.20.20.80 332 622 3.3E-123 T 11-10-2018 AL543_06415 f65aac55047ab9a81525a9b8d503b5bc 1208 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 12 1189 0.0 T 11-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 AL543_06415 f65aac55047ab9a81525a9b8d503b5bc 1208 Gene3D G3DSA:3.40.50.300 12 437 7.2E-150 T 11-10-2018 AL543_06415 f65aac55047ab9a81525a9b8d503b5bc 1208 Gene3D G3DSA:3.40.50.300 446 849 4.4E-155 T 11-10-2018 AL543_06415 f65aac55047ab9a81525a9b8d503b5bc 1208 Pfam PF12705 PD-(D/E)XK nuclease superfamily 966 1174 4.6E-6 T 11-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type AL543_06415 f65aac55047ab9a81525a9b8d503b5bc 1208 SUPERFAMILY SSF52540 16 825 9.76E-107 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_06415 f65aac55047ab9a81525a9b8d503b5bc 1208 Pfam PF00580 UvrD/REP helicase N-terminal domain 19 437 3.8E-57 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AL543_06415 f65aac55047ab9a81525a9b8d503b5bc 1208 Gene3D G3DSA:3.90.320.10 895 1196 1.2E-100 T 11-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal AL543_06415 f65aac55047ab9a81525a9b8d503b5bc 1208 Gene3D G3DSA:1.10.3170.10 160 350 7.2E-150 T 11-10-2018 AL543_06415 f65aac55047ab9a81525a9b8d503b5bc 1208 SUPERFAMILY SSF52980 904 1190 1.13E-83 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AL543_06415 f65aac55047ab9a81525a9b8d503b5bc 1208 Gene3D G3DSA:1.10.486.10 584 732 4.4E-155 T 11-10-2018 AL543_06415 f65aac55047ab9a81525a9b8d503b5bc 1208 Pfam PF13361 UvrD-like helicase C-terminal domain 442 813 6.3E-15 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AL543_06415 f65aac55047ab9a81525a9b8d503b5bc 1208 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 10 1190 22.914 T 11-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 AL543_06170 71bc45c301cc3884ffba2bd6bd0b0e25 156 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 8 153 23.03 T 11-10-2018 IPR011605 NusB antitermination factor GO:0006353 AL543_06170 71bc45c301cc3884ffba2bd6bd0b0e25 156 SUPERFAMILY SSF48013 7 153 1.31E-38 T 11-10-2018 IPR035926 NusB-like superfamily AL543_06170 71bc45c301cc3884ffba2bd6bd0b0e25 156 Gene3D G3DSA:1.10.940.10 3 156 1.8E-47 T 11-10-2018 IPR035926 NusB-like superfamily AL543_06170 71bc45c301cc3884ffba2bd6bd0b0e25 156 Pfam PF01029 NusB family 11 149 1.8E-35 T 11-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AL543_06170 71bc45c301cc3884ffba2bd6bd0b0e25 156 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 10 150 4.9E-42 T 11-10-2018 IPR011605 NusB antitermination factor GO:0006353 AL543_01715 589928d03566f981f8a9fccc1486b636 204 SUPERFAMILY SSF56529 9 188 6.41E-47 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AL543_01715 589928d03566f981f8a9fccc1486b636 204 Gene3D G3DSA:3.90.850.10 7 203 9.7E-47 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AL543_01715 589928d03566f981f8a9fccc1486b636 204 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 15 183 2.4E-28 T 11-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 AL543_08135 6cea37b429ac2a79cb0f851d4296cc7b 130 Pfam PF02313 Fumarate reductase subunit D 16 128 2.0E-45 T 11-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 AL543_08135 6cea37b429ac2a79cb0f851d4296cc7b 130 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 15 126 6.0E-59 T 11-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 AL543_08135 6cea37b429ac2a79cb0f851d4296cc7b 130 Gene3D G3DSA:1.20.1300.10 11 130 3.6E-45 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL543_08135 6cea37b429ac2a79cb0f851d4296cc7b 130 SUPERFAMILY SSF81343 12 130 4.14E-50 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL543_08135 6cea37b429ac2a79cb0f851d4296cc7b 130 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 12 130 24.821 T 11-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 AL543_08135 6cea37b429ac2a79cb0f851d4296cc7b 130 PIRSF PIRSF000179 11 130 4.1E-57 T 11-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 AL543_01340 662701528a1745082d74659320a73c26 239 Gene3D G3DSA:3.30.70.980 131 202 2.1E-44 T 11-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL543_01340 662701528a1745082d74659320a73c26 239 Gene3D G3DSA:1.10.10.200 17 78 8.9E-18 T 11-10-2018 IPR017856 Integrase-like, N-terminal AL543_01340 662701528a1745082d74659320a73c26 239 SUPERFAMILY SSF75625 1 238 9.29E-77 T 11-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL543_01340 662701528a1745082d74659320a73c26 239 Pfam PF01709 Transcriptional regulator 5 236 1.5E-73 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL543_01340 662701528a1745082d74659320a73c26 239 Gene3D G3DSA:3.30.70.980 83 235 2.1E-44 T 11-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL543_01340 662701528a1745082d74659320a73c26 239 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 238 28.459 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL543_08855 82242da5f07aea7414acb8c05b8da696 205 Pfam PF01810 LysE type translocator 15 202 1.5E-34 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL543_08855 82242da5f07aea7414acb8c05b8da696 205 PIRSF PIRSF006324 1 205 2.3E-56 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL543_14750 a339ef286c471c967e8889ddf38a04ad 447 SUPERFAMILY SSF52172 10 165 6.12E-33 T 11-10-2018 IPR011006 CheY-like superfamily AL543_14750 a339ef286c471c967e8889ddf38a04ad 447 Gene3D G3DSA:3.40.50.2300 9 151 4.1E-33 T 11-10-2018 AL543_14750 a339ef286c471c967e8889ddf38a04ad 447 Pfam PF13487 HD domain 283 331 1.2E-12 T 11-10-2018 AL543_14750 a339ef286c471c967e8889ddf38a04ad 447 Pfam PF00072 Response regulator receiver domain 13 121 2.2E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_14750 a339ef286c471c967e8889ddf38a04ad 447 SUPERFAMILY SSF109604 210 379 3.73E-13 T 11-10-2018 AL543_14750 a339ef286c471c967e8889ddf38a04ad 447 Gene3D G3DSA:1.10.3210.10 193 390 2.5E-31 T 11-10-2018 AL543_14750 a339ef286c471c967e8889ddf38a04ad 447 SMART SM00448 11 122 6.2E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_16420 ff722632c14524267c37b76ae7422489 267 SUPERFAMILY SSF56529 2 267 1.7E-75 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AL543_16420 ff722632c14524267c37b76ae7422489 267 TIGRFAM TIGR02312 HpaH: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 1 267 4.7E-141 T 11-10-2018 IPR012690 2-oxo-hepta-4-ene-1,7-dioic acid hydratase GO:0018817|GO:0019439 AL543_16420 ff722632c14524267c37b76ae7422489 267 Gene3D G3DSA:3.90.850.10 1 267 2.3E-80 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AL543_12235 cfba476fa766a24212efb6ee3bed57e9 432 SUPERFAMILY SSF53383 1 423 1.34E-134 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL543_12235 cfba476fa766a24212efb6ee3bed57e9 432 Pfam PF00202 Aminotransferase class-III 33 395 7.5E-77 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL543_12235 cfba476fa766a24212efb6ee3bed57e9 432 Gene3D G3DSA:3.40.640.10 69 317 1.3E-179 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL543_12235 cfba476fa766a24212efb6ee3bed57e9 432 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 105.342 T 11-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 AL543_12235 cfba476fa766a24212efb6ee3bed57e9 432 Gene3D G3DSA:3.90.1150.10 7 419 1.3E-179 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL543_12235 cfba476fa766a24212efb6ee3bed57e9 432 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 424 2.2E-194 T 11-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 AL543_12235 cfba476fa766a24212efb6ee3bed57e9 432 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL543_20170 5b15561672d2fbb5048f0aa646fa37ef 295 Pfam PF00288 GHMP kinases N terminal domain 93 150 6.3E-8 T 11-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 AL543_20170 5b15561672d2fbb5048f0aa646fa37ef 295 PIRSF PIRSF010376 9 285 1.6E-85 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AL543_20170 5b15561672d2fbb5048f0aa646fa37ef 295 Gene3D G3DSA:3.30.230.10 3 165 2.0E-51 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL543_20170 5b15561672d2fbb5048f0aa646fa37ef 295 Pfam PF08544 GHMP kinases C terminal 202 264 6.0E-7 T 11-10-2018 IPR013750 GHMP kinase, C-terminal domain AL543_20170 5b15561672d2fbb5048f0aa646fa37ef 295 Gene3D G3DSA:3.30.70.890 167 285 2.1E-28 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily AL543_20170 5b15561672d2fbb5048f0aa646fa37ef 295 SUPERFAMILY SSF54211 11 162 1.9E-42 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL543_20170 5b15561672d2fbb5048f0aa646fa37ef 295 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 11 277 31.469 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AL543_20170 5b15561672d2fbb5048f0aa646fa37ef 295 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 10 284 4.5E-93 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AL543_20170 5b15561672d2fbb5048f0aa646fa37ef 295 SUPERFAMILY SSF55060 167 283 1.68E-36 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily AL543_14710 827148b246469147d6f8ebddf02759df 329 Gene3D G3DSA:3.40.50.11030 220 329 1.7E-11 T 11-10-2018 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily AL543_14710 827148b246469147d6f8ebddf02759df 329 Pfam PF03481 Putative GTP-binding controlling metal-binding 205 329 7.5E-17 T 11-10-2018 IPR005145 Putative GTP-binding controlling metal-binding domain AL543_14710 827148b246469147d6f8ebddf02759df 329 Gene3D G3DSA:3.90.870.10 9 219 7.2E-77 T 11-10-2018 AL543_14710 827148b246469147d6f8ebddf02759df 329 Pfam PF01300 Telomere recombination 28 203 1.2E-56 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 AL543_14710 827148b246469147d6f8ebddf02759df 329 SUPERFAMILY SSF55821 19 215 5.19E-62 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AL543_14710 827148b246469147d6f8ebddf02759df 329 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 20 213 3.6E-57 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 AL543_14710 827148b246469147d6f8ebddf02759df 329 PIRSF PIRSF004930 8 329 1.2E-105 T 11-10-2018 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 AL543_12315 a113689cc6b44c0f4dac58f09207902b 111 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 73 2.6E-26 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AL543_12315 a113689cc6b44c0f4dac58f09207902b 111 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 2.5E-45 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AL543_12315 a113689cc6b44c0f4dac58f09207902b 111 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 2.5E-45 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AL543_12315 a113689cc6b44c0f4dac58f09207902b 111 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 2.5E-45 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AL543_12315 a113689cc6b44c0f4dac58f09207902b 111 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 2.5E-45 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AL543_12315 a113689cc6b44c0f4dac58f09207902b 111 Pfam PF03840 Preprotein translocase SecG subunit 4 72 1.9E-22 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AL543_12910 d1b36b0c6710b9e52845edf4fa825f98 352 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 345 1.0E-159 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AL543_12910 d1b36b0c6710b9e52845edf4fa825f98 352 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 346 47.49 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AL543_12910 d1b36b0c6710b9e52845edf4fa825f98 352 Pfam PF02547 Queuosine biosynthesis protein 3 345 6.2E-134 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AL543_12910 d1b36b0c6710b9e52845edf4fa825f98 352 Gene3D G3DSA:2.40.10.240 64 163 3.6E-118 T 11-10-2018 AL543_12910 d1b36b0c6710b9e52845edf4fa825f98 352 Gene3D G3DSA:3.40.1780.10 14 345 3.6E-118 T 11-10-2018 AL543_12910 d1b36b0c6710b9e52845edf4fa825f98 352 SUPERFAMILY SSF111337 1 345 2.62E-140 T 11-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AL543_12625 97122a051b08e4a969afa4bac211b058 114 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 24 97 8.0E-34 T 11-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 AL543_12625 97122a051b08e4a969afa4bac211b058 114 Pfam PF01371 Trp repressor protein 24 109 6.1E-33 T 11-10-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 AL543_12625 97122a051b08e4a969afa4bac211b058 114 Gene3D G3DSA:1.10.1270.10 13 113 1.5E-35 T 11-10-2018 IPR038116 TrpR-like superfamily AL543_12625 97122a051b08e4a969afa4bac211b058 114 PIRSF PIRSF003196 16 114 1.5E-40 T 11-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 AL543_12625 97122a051b08e4a969afa4bac211b058 114 Hamap MF_00475 Trp operon repressor [trpR]. 21 114 24.301 T 11-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 AL543_12625 97122a051b08e4a969afa4bac211b058 114 TIGRFAM TIGR01321 TrpR: trp operon repressor 22 103 1.7E-28 T 11-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 AL543_12625 97122a051b08e4a969afa4bac211b058 114 SUPERFAMILY SSF48295 13 110 3.66E-30 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AL543_17315 a724cee3e4f5ec6bf26cb25c1cd81c26 313 PIRSF PIRSF000450 1 309 6.4E-149 T 11-10-2018 IPR033752 MetA family AL543_17315 a724cee3e4f5ec6bf26cb25c1cd81c26 313 SUPERFAMILY SSF52317 17 297 1.59E-102 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL543_17315 a724cee3e4f5ec6bf26cb25c1cd81c26 313 Pfam PF04204 Homoserine O-succinyltransferase 2 299 7.2E-135 T 11-10-2018 IPR033752 MetA family AL543_17315 a724cee3e4f5ec6bf26cb25c1cd81c26 313 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 302 2.4E-169 T 11-10-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 AL543_17315 a724cee3e4f5ec6bf26cb25c1cd81c26 313 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 1.0E-136 T 11-10-2018 AL543_17315 a724cee3e4f5ec6bf26cb25c1cd81c26 313 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 299 41.231 T 11-10-2018 IPR033752 MetA family AL543_17315 a724cee3e4f5ec6bf26cb25c1cd81c26 313 Gene3D G3DSA:3.40.50.880 1 301 6.1E-125 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL543_10430 0b87d1bf2a44eda92b55a31114bacace 556 SMART SM00283 294 555 9.9E-64 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_10430 0b87d1bf2a44eda92b55a31114bacace 556 SMART SM00304 225 279 1.3E-9 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_10430 0b87d1bf2a44eda92b55a31114bacace 556 SMART SM01049 48 142 8.4E-44 T 11-10-2018 IPR033480 Single Cache domain 2 AL543_10430 0b87d1bf2a44eda92b55a31114bacace 556 Pfam PF00672 HAMP domain 225 274 3.1E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_10430 0b87d1bf2a44eda92b55a31114bacace 556 Pfam PF17200 Single Cache domain 2 54 197 7.1E-47 T 11-10-2018 IPR033480 Single Cache domain 2 AL543_10430 0b87d1bf2a44eda92b55a31114bacace 556 SUPERFAMILY SSF58104 247 556 3.53E-72 T 11-10-2018 AL543_10430 0b87d1bf2a44eda92b55a31114bacace 556 Gene3D G3DSA:1.10.287.950 225 556 1.4E-70 T 11-10-2018 AL543_10430 0b87d1bf2a44eda92b55a31114bacace 556 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 339 521 2.4E-42 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_10430 0b87d1bf2a44eda92b55a31114bacace 556 Gene3D G3DSA:3.30.450.20 47 202 3.6E-65 T 11-10-2018 AL543_13490 b8870cf50310fb9b5b7766176dc955e5 63 Pfam PF14056 Domain of unknown function (DUF4250) 8 62 6.4E-21 T 11-10-2018 IPR025346 Protein of unknown function DUF4250 AL543_14425 bea48986c5d8e346e53105886c9ed3e7 355 SUPERFAMILY SSF53686 23 335 7.2E-70 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL543_14425 bea48986c5d8e346e53105886c9ed3e7 355 Gene3D G3DSA:3.40.50.1100 48 165 3.1E-66 T 11-10-2018 AL543_14425 bea48986c5d8e346e53105886c9ed3e7 355 Gene3D G3DSA:3.40.50.1100 24 324 3.1E-66 T 11-10-2018 AL543_14425 bea48986c5d8e346e53105886c9ed3e7 355 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 36 316 3.1E-40 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AL543_10845 de9c3af85c9cf9c54209f03f9e9ff66c 429 Gene3D G3DSA:3.40.50.11060 18 138 8.6E-37 T 11-10-2018 AL543_10845 de9c3af85c9cf9c54209f03f9e9ff66c 429 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 1.9E-28 T 11-10-2018 IPR032305 GTP-binding protein, middle domain AL543_10845 de9c3af85c9cf9c54209f03f9e9ff66c 429 Gene3D G3DSA:3.40.50.300 197 371 5.1E-43 T 11-10-2018 AL543_10845 de9c3af85c9cf9c54209f03f9e9ff66c 429 PIRSF PIRSF006809 3 422 1.7E-149 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 AL543_10845 de9c3af85c9cf9c54209f03f9e9ff66c 429 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 1.7E-30 T 11-10-2018 IPR025121 GTPase HflX, N-terminal AL543_10845 de9c3af85c9cf9c54209f03f9e9ff66c 429 SUPERFAMILY SSF54980 365 428 8.63E-17 T 11-10-2018 IPR035647 EF-G domain III/V-like AL543_10845 de9c3af85c9cf9c54209f03f9e9ff66c 429 Hamap MF_00900 GTPase HflX [hflX]. 27 390 46.884 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 AL543_10845 de9c3af85c9cf9c54209f03f9e9ff66c 429 SUPERFAMILY SSF52540 197 370 9.06E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_10845 de9c3af85c9cf9c54209f03f9e9ff66c 429 Pfam PF01926 50S ribosome-binding GTPase 200 318 1.0E-20 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AL543_10845 de9c3af85c9cf9c54209f03f9e9ff66c 429 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 361 1.7E-155 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 AL543_10845 de9c3af85c9cf9c54209f03f9e9ff66c 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 4.6E-10 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AL543_10845 de9c3af85c9cf9c54209f03f9e9ff66c 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 4.6E-10 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AL543_10845 de9c3af85c9cf9c54209f03f9e9ff66c 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 4.6E-10 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AL543_08230 e893956987020d5596739a364d7bd125 335 Pfam PF13377 Periplasmic binding protein-like domain 168 328 1.7E-43 T 11-10-2018 AL543_08230 e893956987020d5596739a364d7bd125 335 Gene3D G3DSA:3.40.50.2300 56 306 5.7E-83 T 11-10-2018 AL543_08230 e893956987020d5596739a364d7bd125 335 Gene3D G3DSA:1.10.260.40 1 55 2.9E-26 T 11-10-2018 AL543_08230 e893956987020d5596739a364d7bd125 335 SUPERFAMILY SSF53822 60 332 2.94E-91 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AL543_08230 e893956987020d5596739a364d7bd125 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 4.4E-20 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL543_08230 e893956987020d5596739a364d7bd125 335 SMART SM00354 1 71 4.8E-33 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL543_08230 e893956987020d5596739a364d7bd125 335 Gene3D G3DSA:3.40.50.2300 160 289 5.7E-83 T 11-10-2018 AL543_08230 e893956987020d5596739a364d7bd125 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 11-10-2018 AL543_08230 e893956987020d5596739a364d7bd125 335 SUPERFAMILY SSF47413 1 59 2.16E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL543_18285 c83880abafadefe41d803ebac8bd7b25 353 SUPERFAMILY SSF142754 28 341 5.49E-106 T 11-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AL543_18285 c83880abafadefe41d803ebac8bd7b25 353 Pfam PF02445 Quinolinate synthetase A protein 32 340 2.8E-101 T 11-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AL543_18285 c83880abafadefe41d803ebac8bd7b25 353 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 29 341 7.0E-113 T 11-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AL543_18285 c83880abafadefe41d803ebac8bd7b25 353 Gene3D G3DSA:3.40.50.10800 200 295 1.5E-93 T 11-10-2018 AL543_18285 c83880abafadefe41d803ebac8bd7b25 353 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 347 66.484 T 11-10-2018 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AL543_18285 c83880abafadefe41d803ebac8bd7b25 353 Gene3D G3DSA:3.40.50.10800 31 322 1.5E-93 T 11-10-2018 AL543_18285 c83880abafadefe41d803ebac8bd7b25 353 Gene3D G3DSA:3.40.50.10800 115 340 1.5E-93 T 11-10-2018 AL543_07030 cbde834dea670fbcf64f5a27153e3a02 403 Gene3D G3DSA:3.30.460.10 1 121 4.8E-28 T 11-10-2018 AL543_07030 cbde834dea670fbcf64f5a27153e3a02 403 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 4.6E-14 T 11-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AL543_07030 cbde834dea670fbcf64f5a27153e3a02 403 SUPERFAMILY SSF81891 120 360 5.36E-54 T 11-10-2018 AL543_07030 cbde834dea670fbcf64f5a27153e3a02 403 Pfam PF01966 HD domain 229 326 3.5E-6 T 11-10-2018 IPR006674 HD domain AL543_07030 cbde834dea670fbcf64f5a27153e3a02 403 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 403 52.521 T 11-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 AL543_07030 cbde834dea670fbcf64f5a27153e3a02 403 PIRSF PIRSF000813 1 403 1.1E-200 T 11-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 AL543_07030 cbde834dea670fbcf64f5a27153e3a02 403 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 42.894 T 11-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 AL543_07030 cbde834dea670fbcf64f5a27153e3a02 403 Pfam PF01743 Poly A polymerase head domain 3 122 2.8E-17 T 11-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AL543_07030 cbde834dea670fbcf64f5a27153e3a02 403 SUPERFAMILY SSF81301 1 119 1.96E-30 T 11-10-2018 AL543_07030 cbde834dea670fbcf64f5a27153e3a02 403 Gene3D G3DSA:1.10.3090.10 122 403 3.0E-43 T 11-10-2018 AL543_09855 4c6c0f108c5b050513d90bae7e1453a6 494 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 367 8.2E-124 T 11-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AL543_09855 4c6c0f108c5b050513d90bae7e1453a6 494 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 1.4E-59 T 11-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AL543_09855 4c6c0f108c5b050513d90bae7e1453a6 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 355 485 6.1E-16 T 11-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AL543_09855 4c6c0f108c5b050513d90bae7e1453a6 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 341 3.0E-25 T 11-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AL543_09855 4c6c0f108c5b050513d90bae7e1453a6 494 SUPERFAMILY SSF51735 27 208 7.98E-58 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_09855 4c6c0f108c5b050513d90bae7e1453a6 494 SUPERFAMILY SSF48179 210 341 6.12E-39 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AL543_09855 4c6c0f108c5b050513d90bae7e1453a6 494 Gene3D G3DSA:3.40.50.720 1 208 3.1E-86 T 11-10-2018 AL543_09855 4c6c0f108c5b050513d90bae7e1453a6 494 SUPERFAMILY SSF48179 348 487 8.84E-41 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AL543_09855 4c6c0f108c5b050513d90bae7e1453a6 494 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 22 488 36.61 T 11-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AL543_09855 4c6c0f108c5b050513d90bae7e1453a6 494 Gene3D G3DSA:1.10.1040.10 209 494 1.8E-119 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL543_10705 92dcb24bcadeb9eb8742f30d8bff1112 1341 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 4.3E-24 T 11-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL543_10705 92dcb24bcadeb9eb8742f30d8bff1112 1341 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 7.3E-29 T 11-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL543_10705 92dcb24bcadeb9eb8742f30d8bff1112 1341 Gene3D G3DSA:3.90.1800.10 1251 1305 8.1E-11 T 11-10-2018 AL543_10705 92dcb24bcadeb9eb8742f30d8bff1112 1341 Gene3D G3DSA:2.40.270.10 790 832 1.7E-6 T 11-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL543_10705 92dcb24bcadeb9eb8742f30d8bff1112 1341 Gene3D G3DSA:2.40.270.10 998 1241 6.6E-89 T 11-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL543_10705 92dcb24bcadeb9eb8742f30d8bff1112 1341 Gene3D G3DSA:2.40.50.150 833 954 3.6E-44 T 11-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL543_10705 92dcb24bcadeb9eb8742f30d8bff1112 1341 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 11-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL543_10705 92dcb24bcadeb9eb8742f30d8bff1112 1341 Gene3D G3DSA:3.90.1110.10 157 269 3.2E-27 T 11-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL543_10705 92dcb24bcadeb9eb8742f30d8bff1112 1341 Pfam PF04560 RNA polymerase Rpb2, domain 7 1265 1339 3.8E-27 T 11-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL543_10705 92dcb24bcadeb9eb8742f30d8bff1112 1341 Gene3D G3DSA:3.90.1100.10 19 156 1.4E-48 T 11-10-2018 AL543_10705 92dcb24bcadeb9eb8742f30d8bff1112 1341 Pfam PF04563 RNA polymerase beta subunit 26 500 6.4E-58 T 11-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL543_10705 92dcb24bcadeb9eb8742f30d8bff1112 1341 Pfam PF04561 RNA polymerase Rpb2, domain 2 336 454 1.6E-17 T 11-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL543_10705 92dcb24bcadeb9eb8742f30d8bff1112 1341 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 235 1.1E-7 T 11-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL543_10705 92dcb24bcadeb9eb8742f30d8bff1112 1341 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1338 0.0 T 11-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL543_10705 92dcb24bcadeb9eb8742f30d8bff1112 1341 Gene3D G3DSA:3.90.1110.10 302 441 2.2E-35 T 11-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL543_10705 92dcb24bcadeb9eb8742f30d8bff1112 1341 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1263 3.9E-157 T 11-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL543_10705 92dcb24bcadeb9eb8742f30d8bff1112 1341 Gene3D G3DSA:3.90.1100.10 647 713 2.8E-21 T 11-10-2018 AL543_10705 92dcb24bcadeb9eb8742f30d8bff1112 1341 Gene3D G3DSA:3.90.1100.10 442 622 2.0E-65 T 11-10-2018 AL543_10705 92dcb24bcadeb9eb8742f30d8bff1112 1341 SUPERFAMILY SSF64484 11 1340 0.0 T 11-10-2018 AL543_10705 92dcb24bcadeb9eb8742f30d8bff1112 1341 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1341 12.295 T 11-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL543_10705 92dcb24bcadeb9eb8742f30d8bff1112 1341 Gene3D G3DSA:2.40.50.100 714 788 9.5E-32 T 11-10-2018 AL543_06285 0c8c13d468c4676d576e1da19ea6c13c 408 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 2 408 62.427 T 11-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 AL543_06285 0c8c13d468c4676d576e1da19ea6c13c 408 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 4 408 9.1E-228 T 11-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 AL543_06285 0c8c13d468c4676d576e1da19ea6c13c 408 Gene3D G3DSA:2.40.30.10 127 265 3.0E-51 T 11-10-2018 AL543_06285 0c8c13d468c4676d576e1da19ea6c13c 408 Gene3D G3DSA:3.40.50.80 276 394 1.6E-31 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AL543_06285 0c8c13d468c4676d576e1da19ea6c13c 408 SUPERFAMILY SSF54292 38 125 4.57E-21 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AL543_06285 0c8c13d468c4676d576e1da19ea6c13c 408 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 41 116 2.0E-10 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL543_06285 0c8c13d468c4676d576e1da19ea6c13c 408 Pfam PF00970 Oxidoreductase FAD-binding domain 205 267 1.5E-8 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 AL543_06285 0c8c13d468c4676d576e1da19ea6c13c 408 SUPERFAMILY SSF63380 106 273 8.42E-35 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AL543_06285 0c8c13d468c4676d576e1da19ea6c13c 408 PIRSF PIRSF000044 1 408 1.5E-218 T 11-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 AL543_06285 0c8c13d468c4676d576e1da19ea6c13c 408 Pfam PF00175 Oxidoreductase NAD-binding domain 278 386 2.9E-17 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AL543_06285 0c8c13d468c4676d576e1da19ea6c13c 408 Gene3D G3DSA:3.10.20.30 35 126 2.0E-33 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AL543_06285 0c8c13d468c4676d576e1da19ea6c13c 408 SUPERFAMILY SSF52343 259 403 1.03E-35 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AL543_19840 e8876cd62fdd413e500c3d2ca22ab833 387 Pfam PF11890 Domain of unknown function (DUF3410) 296 376 1.6E-27 T 11-10-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00750+1.1.1.290 AL543_19840 e8876cd62fdd413e500c3d2ca22ab833 387 Gene3D G3DSA:3.40.50.720 99 264 6.1E-117 T 11-10-2018 AL543_19840 e8876cd62fdd413e500c3d2ca22ab833 387 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 116 263 9.1E-36 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AL543_19840 e8876cd62fdd413e500c3d2ca22ab833 387 Gene3D G3DSA:3.30.1370.170 300 387 1.4E-38 T 11-10-2018 IPR038251 PdxB, dimerisation domain superfamily KEGG: 00750+1.1.1.290 AL543_19840 e8876cd62fdd413e500c3d2ca22ab833 387 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 10 293 1.1E-23 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 AL543_19840 e8876cd62fdd413e500c3d2ca22ab833 387 SUPERFAMILY SSF52283 8 137 6.59E-23 T 11-10-2018 AL543_19840 e8876cd62fdd413e500c3d2ca22ab833 387 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 204 220 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AL543_19840 e8876cd62fdd413e500c3d2ca22ab833 387 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 7 364 45.925 T 11-10-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00750+1.1.1.290 AL543_19840 e8876cd62fdd413e500c3d2ca22ab833 387 Gene3D G3DSA:3.40.50.720 7 285 6.1E-117 T 11-10-2018 AL543_19840 e8876cd62fdd413e500c3d2ca22ab833 387 SUPERFAMILY SSF51735 99 264 6.93E-37 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_16530 acbf8b1c45b31579f96dc6d13390ce32 621 Pfam PF00512 His Kinase A (phospho-acceptor) domain 260 325 1.2E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_16530 acbf8b1c45b31579f96dc6d13390ce32 621 Pfam PF00072 Response regulator receiver domain 504 613 1.1E-9 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_16530 acbf8b1c45b31579f96dc6d13390ce32 621 Pfam PF12860 PAS fold 93 196 2.5E-10 T 11-10-2018 AL543_16530 acbf8b1c45b31579f96dc6d13390ce32 621 SUPERFAMILY SSF55874 315 481 4.45E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_16530 acbf8b1c45b31579f96dc6d13390ce32 621 SUPERFAMILY SSF52172 501 620 1.07E-14 T 11-10-2018 IPR011006 CheY-like superfamily AL543_16530 acbf8b1c45b31579f96dc6d13390ce32 621 SMART SM00448 502 615 4.4E-9 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_16530 acbf8b1c45b31579f96dc6d13390ce32 621 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 419 2.9E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_16530 acbf8b1c45b31579f96dc6d13390ce32 621 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 433 2.9E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_16530 acbf8b1c45b31579f96dc6d13390ce32 621 PRINTS PR00344 Bacterial sensor protein C-terminal signature 464 477 2.9E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_16530 acbf8b1c45b31579f96dc6d13390ce32 621 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 458 2.9E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_16530 acbf8b1c45b31579f96dc6d13390ce32 621 SUPERFAMILY SSF47384 245 325 1.69E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL543_16530 acbf8b1c45b31579f96dc6d13390ce32 621 Gene3D G3DSA:3.30.565.10 330 485 1.0E-31 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_16530 acbf8b1c45b31579f96dc6d13390ce32 621 SMART SM00388 260 325 4.0E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_16530 acbf8b1c45b31579f96dc6d13390ce32 621 Gene3D G3DSA:3.30.450.20 74 199 4.7E-6 T 11-10-2018 AL543_16530 acbf8b1c45b31579f96dc6d13390ce32 621 Gene3D G3DSA:3.40.50.2300 498 621 3.5E-15 T 11-10-2018 AL543_16530 acbf8b1c45b31579f96dc6d13390ce32 621 Gene3D G3DSA:1.10.287.130 221 323 7.9E-15 T 11-10-2018 AL543_16530 acbf8b1c45b31579f96dc6d13390ce32 621 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 370 479 1.2E-15 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_16530 acbf8b1c45b31579f96dc6d13390ce32 621 SMART SM00387 369 480 2.0E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_18910 ef63ae48dba506b9c9645da57d08268c 446 SUPERFAMILY SSF46689 357 439 3.99E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_18910 ef63ae48dba506b9c9645da57d08268c 446 Gene3D G3DSA:3.40.50.2300 2 129 1.7E-34 T 11-10-2018 AL543_18910 ef63ae48dba506b9c9645da57d08268c 446 Gene3D G3DSA:3.40.50.300 140 314 2.2E-60 T 11-10-2018 AL543_18910 ef63ae48dba506b9c9645da57d08268c 446 Gene3D G3DSA:1.10.10.60 389 443 3.6E-12 T 11-10-2018 AL543_18910 ef63ae48dba506b9c9645da57d08268c 446 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 357 366 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AL543_18910 ef63ae48dba506b9c9645da57d08268c 446 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 230 245 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL543_18910 ef63ae48dba506b9c9645da57d08268c 446 SUPERFAMILY SSF52540 144 374 1.86E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_18910 ef63ae48dba506b9c9645da57d08268c 446 SMART SM00382 164 308 2.2E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_18910 ef63ae48dba506b9c9645da57d08268c 446 SUPERFAMILY SSF52172 2 188 2.85E-36 T 11-10-2018 IPR011006 CheY-like superfamily AL543_18910 ef63ae48dba506b9c9645da57d08268c 446 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 168 181 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL543_18910 ef63ae48dba506b9c9645da57d08268c 446 Pfam PF00072 Response regulator receiver domain 4 114 3.3E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_18910 ef63ae48dba506b9c9645da57d08268c 446 SMART SM00448 2 114 5.1E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_18910 ef63ae48dba506b9c9645da57d08268c 446 Pfam PF02954 Bacterial regulatory protein, Fis family 397 437 4.6E-9 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL543_18910 ef63ae48dba506b9c9645da57d08268c 446 Gene3D G3DSA:1.10.8.60 315 388 6.1E-20 T 11-10-2018 AL543_18910 ef63ae48dba506b9c9645da57d08268c 446 Pfam PF00158 Sigma-54 interaction domain 144 310 1.5E-69 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL543_12415 44ab353f3c526fc27b70d84253c6468e 685 Pfam PF00990 Diguanylate cyclase, GGDEF domain 242 398 7.8E-44 T 11-10-2018 IPR000160 GGDEF domain AL543_12415 44ab353f3c526fc27b70d84253c6468e 685 SUPERFAMILY SSF141868 418 672 9.94E-89 T 11-10-2018 IPR035919 EAL domain superfamily AL543_12415 44ab353f3c526fc27b70d84253c6468e 685 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 238 400 7.2E-38 T 11-10-2018 IPR000160 GGDEF domain AL543_12415 44ab353f3c526fc27b70d84253c6468e 685 SUPERFAMILY SSF55073 247 404 1.96E-47 T 11-10-2018 IPR029787 Nucleotide cyclase AL543_12415 44ab353f3c526fc27b70d84253c6468e 685 Pfam PF00563 EAL domain 420 655 7.9E-75 T 11-10-2018 IPR001633 EAL domain AL543_12415 44ab353f3c526fc27b70d84253c6468e 685 Gene3D G3DSA:3.30.70.270 236 414 1.6E-57 T 11-10-2018 AL543_12415 44ab353f3c526fc27b70d84253c6468e 685 SMART SM00052 412 660 2.0E-104 T 11-10-2018 IPR001633 EAL domain AL543_12415 44ab353f3c526fc27b70d84253c6468e 685 SMART SM00267 231 402 2.6E-58 T 11-10-2018 IPR000160 GGDEF domain AL543_12415 44ab353f3c526fc27b70d84253c6468e 685 Gene3D G3DSA:3.20.20.450 415 676 6.0E-97 T 11-10-2018 IPR035919 EAL domain superfamily AL543_08395 a6980d829dc180905804794c19faa207 535 Gene3D G3DSA:3.20.20.300 2 357 3.6E-109 T 11-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 AL543_08395 a6980d829dc180905804794c19faa207 535 Gene3D G3DSA:3.40.50.1700 362 527 2.3E-5 T 11-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 AL543_08395 a6980d829dc180905804794c19faa207 535 SUPERFAMILY SSF51445 5 371 1.16E-80 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AL543_08395 a6980d829dc180905804794c19faa207 535 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 254 271 - T 11-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 AL543_08395 a6980d829dc180905804794c19faa207 535 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 16 344 8.0E-85 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AL543_01805 2a97fbc460974f87d43adc7d550f9613 327 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 32 311 4.1E-88 T 11-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 AL543_01805 2a97fbc460974f87d43adc7d550f9613 327 SUPERFAMILY SSF53850 139 276 6.39E-10 T 11-10-2018 AL543_01805 2a97fbc460974f87d43adc7d550f9613 327 Gene3D G3DSA:3.40.190.170 29 327 2.9E-108 T 11-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily AL543_01805 2a97fbc460974f87d43adc7d550f9613 327 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 32 285 1.5E-80 T 11-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 AL543_01805 2a97fbc460974f87d43adc7d550f9613 327 PIRSF PIRSF006470 1 325 5.5E-95 T 11-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 AL543_20565 4413071d684aa6f03b4cbf785bbb06ab 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 3.6E-48 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AL543_20565 4413071d684aa6f03b4cbf785bbb06ab 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 3.6E-48 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AL543_20565 4413071d684aa6f03b4cbf785bbb06ab 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 3.6E-48 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AL543_20565 4413071d684aa6f03b4cbf785bbb06ab 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 3.6E-48 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AL543_20565 4413071d684aa6f03b4cbf785bbb06ab 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 3.6E-48 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AL543_20565 4413071d684aa6f03b4cbf785bbb06ab 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 3.6E-48 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AL543_20565 4413071d684aa6f03b4cbf785bbb06ab 319 SUPERFAMILY SSF52096 5 318 8.81E-104 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AL543_20565 4413071d684aa6f03b4cbf785bbb06ab 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 151 2.0E-63 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AL543_20565 4413071d684aa6f03b4cbf785bbb06ab 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 50.595 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AL543_20565 4413071d684aa6f03b4cbf785bbb06ab 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 7.6E-164 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AL543_20565 4413071d684aa6f03b4cbf785bbb06ab 319 Gene3D G3DSA:3.90.226.10 2 318 1.1E-120 T 11-10-2018 AL543_04540 6e079cfc31d0c7fcf4e4558b2a7b43e6 181 Pfam PF01292 Prokaryotic cytochrome b561 8 178 1.9E-31 T 11-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AL543_04540 6e079cfc31d0c7fcf4e4558b2a7b43e6 181 SUPERFAMILY SSF81342 6 179 5.73E-37 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AL543_16440 19b06ed6b755988a6912949d6740a07b 506 Pfam PF00171 Aldehyde dehydrogenase family 33 492 3.2E-171 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AL543_16440 19b06ed6b755988a6912949d6740a07b 506 Gene3D G3DSA:3.40.605.10 38 490 1.2E-173 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AL543_16440 19b06ed6b755988a6912949d6740a07b 506 SUPERFAMILY SSF53720 16 494 1.44E-162 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AL543_16440 19b06ed6b755988a6912949d6740a07b 506 Gene3D G3DSA:3.40.309.10 270 465 1.2E-173 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AL543_16440 19b06ed6b755988a6912949d6740a07b 506 TIGRFAM TIGR02299 HpaE: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase 25 506 4.3E-264 T 11-10-2018 IPR011985 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase GO:0018480|GO:1901023 AL543_16440 19b06ed6b755988a6912949d6740a07b 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 266 273 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AL543_11220 0a5b414e013b72295fc22dff2198e295 347 Pfam PF06723 MreB/Mbl protein 11 338 1.4E-148 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AL543_11220 0a5b414e013b72295fc22dff2198e295 347 Gene3D G3DSA:3.90.640.10 190 263 1.4E-131 T 11-10-2018 AL543_11220 0a5b414e013b72295fc22dff2198e295 347 SUPERFAMILY SSF53067 9 152 1.11E-37 T 11-10-2018 AL543_11220 0a5b414e013b72295fc22dff2198e295 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 2.7E-164 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AL543_11220 0a5b414e013b72295fc22dff2198e295 347 SUPERFAMILY SSF53067 154 340 8.26E-51 T 11-10-2018 AL543_11220 0a5b414e013b72295fc22dff2198e295 347 Gene3D G3DSA:3.30.420.40 158 321 1.4E-131 T 11-10-2018 AL543_11220 0a5b414e013b72295fc22dff2198e295 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 1.6E-63 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AL543_11220 0a5b414e013b72295fc22dff2198e295 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 1.6E-63 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AL543_11220 0a5b414e013b72295fc22dff2198e295 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 1.6E-63 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AL543_11220 0a5b414e013b72295fc22dff2198e295 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 1.6E-63 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AL543_11220 0a5b414e013b72295fc22dff2198e295 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 1.6E-63 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AL543_11220 0a5b414e013b72295fc22dff2198e295 347 Gene3D G3DSA:3.30.420.40 14 331 1.4E-131 T 11-10-2018 AL543_16135 18e95dcef7c5134a149930e2eddbe685 109 PIRSF PIRSF006223 2 109 1.2E-41 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE AL543_16135 18e95dcef7c5134a149930e2eddbe685 109 Gene3D G3DSA:3.30.1420.10 1 38 4.6E-12 T 11-10-2018 AL543_16135 18e95dcef7c5134a149930e2eddbe685 109 Gene3D G3DSA:1.10.10.370 39 109 3.3E-31 T 11-10-2018 AL543_16135 18e95dcef7c5134a149930e2eddbe685 109 Pfam PF04358 DsrC like protein 4 109 3.4E-44 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE AL543_16135 18e95dcef7c5134a149930e2eddbe685 109 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 2 109 2.2E-49 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE AL543_16135 18e95dcef7c5134a149930e2eddbe685 109 SUPERFAMILY SSF69721 2 109 3.79E-41 T 11-10-2018 IPR025526 DsrC-like domain superfamily AL543_09000 2c85efd49e484a533dc51aa554a98721 255 SUPERFAMILY SSF51556 1 254 2.04E-79 T 11-10-2018 IPR032466 Metal-dependent hydrolase AL543_09000 2c85efd49e484a533dc51aa554a98721 255 Pfam PF01026 TatD related DNase 2 252 1.4E-66 T 11-10-2018 IPR001130 TatD family GO:0016788 AL543_09000 2c85efd49e484a533dc51aa554a98721 255 Gene3D G3DSA:3.20.20.140 1 255 2.2E-80 T 11-10-2018 AL543_09000 2c85efd49e484a533dc51aa554a98721 255 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 1 252 9.6E-72 T 11-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 AL543_09000 2c85efd49e484a533dc51aa554a98721 255 PIRSF PIRSF005902 1 255 2.3E-70 T 11-10-2018 IPR001130 TatD family GO:0016788 AL543_14175 19ba6e015fd79842b151c504ba5c4228 213 TIGRFAM TIGR01083 nth: endonuclease III 5 194 2.3E-89 T 11-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 AL543_14175 19ba6e015fd79842b151c504ba5c4228 213 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.649 T 11-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 AL543_14175 19ba6e015fd79842b151c504ba5c4228 213 Pfam PF00633 Helix-hairpin-helix motif 99 127 2.5E-8 T 11-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 AL543_14175 19ba6e015fd79842b151c504ba5c4228 213 Gene3D G3DSA:1.10.340.30 21 132 1.1E-78 T 11-10-2018 AL543_14175 19ba6e015fd79842b151c504ba5c4228 213 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 1.1E-4 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 AL543_14175 19ba6e015fd79842b151c504ba5c4228 213 SMART SM00478 38 185 2.0E-53 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AL543_14175 19ba6e015fd79842b151c504ba5c4228 213 PIRSF PIRSF001435 1 210 9.0E-50 T 11-10-2018 AL543_14175 19ba6e015fd79842b151c504ba5c4228 213 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 11-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 AL543_14175 19ba6e015fd79842b151c504ba5c4228 213 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 7.1E-19 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AL543_14175 19ba6e015fd79842b151c504ba5c4228 213 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 11-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AL543_14175 19ba6e015fd79842b151c504ba5c4228 213 Gene3D G3DSA:1.10.1670.10 11 203 1.1E-78 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AL543_14175 19ba6e015fd79842b151c504ba5c4228 213 SMART SM00525 186 206 4.4E-5 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 AL543_14175 19ba6e015fd79842b151c504ba5c4228 213 SUPERFAMILY SSF48150 4 207 2.36E-71 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AL543_04680 8a8c4f4e867af65435755086b831cc62 686 SUPERFAMILY SSF47384 179 246 8.24E-6 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL543_04680 8a8c4f4e867af65435755086b831cc62 686 Gene3D G3DSA:3.30.565.10 260 414 1.4E-27 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_04680 8a8c4f4e867af65435755086b831cc62 686 Gene3D G3DSA:1.10.287.130 172 259 1.9E-6 T 11-10-2018 AL543_04680 8a8c4f4e867af65435755086b831cc62 686 SMART SM00448 568 682 2.1E-33 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_04680 8a8c4f4e867af65435755086b831cc62 686 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 313 414 1.1E-15 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_04680 8a8c4f4e867af65435755086b831cc62 686 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 413 6.4E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_04680 8a8c4f4e867af65435755086b831cc62 686 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 394 6.4E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_04680 8a8c4f4e867af65435755086b831cc62 686 PRINTS PR00344 Bacterial sensor protein C-terminal signature 346 360 6.4E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_04680 8a8c4f4e867af65435755086b831cc62 686 SUPERFAMILY SSF52172 567 685 3.27E-34 T 11-10-2018 IPR011006 CheY-like superfamily AL543_04680 8a8c4f4e867af65435755086b831cc62 686 Pfam PF00072 Response regulator receiver domain 570 682 1.5E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_04680 8a8c4f4e867af65435755086b831cc62 686 SMART SM00387 309 416 1.1E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_04680 8a8c4f4e867af65435755086b831cc62 686 Gene3D G3DSA:3.40.50.2300 556 686 6.2E-35 T 11-10-2018 AL543_04680 8a8c4f4e867af65435755086b831cc62 686 SUPERFAMILY SSF55874 254 416 1.24E-31 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_02905 89136cbe6cfad3641e2ea3393529ed57 294 Pfam PF01261 Xylose isomerase-like TIM barrel 30 238 3.3E-35 T 11-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AL543_02905 89136cbe6cfad3641e2ea3393529ed57 294 Gene3D G3DSA:3.20.20.150 3 287 1.5E-65 T 11-10-2018 AL543_02905 89136cbe6cfad3641e2ea3393529ed57 294 TIGRFAM TIGR00542 hxl6Piso_put: putative hexulose-6-phosphate isomerase 7 285 5.5E-101 T 11-10-2018 IPR004560 L-ribulose-5-phosphate 3-epimerase GO:0005975|GO:0016861 KEGG: 00040+5.1.3.22|KEGG: 00053+5.1.3.22|MetaCyc: PWY-6961 AL543_02905 89136cbe6cfad3641e2ea3393529ed57 294 SUPERFAMILY SSF51658 7 277 1.57E-49 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily AL543_05490 3cc9facf468afc185ed784206a72742d 89 Gene3D G3DSA:3.30.2310.20 7 89 1.5E-41 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily AL543_05490 3cc9facf468afc185ed784206a72742d 89 SUPERFAMILY SSF143011 8 88 1.22E-28 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily AL543_05490 3cc9facf468afc185ed784206a72742d 89 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 10 89 5.8E-37 T 11-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 AL543_05490 3cc9facf468afc185ed784206a72742d 89 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 10 89 7.0E-44 T 11-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 AL543_07250 1d1865050033e48d62e56a9e6e00bbc8 178 SUPERFAMILY SSF48317 6 175 1.03E-37 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AL543_07250 1d1865050033e48d62e56a9e6e00bbc8 178 Gene3D G3DSA:1.20.144.10 90 178 1.1E-20 T 11-10-2018 AL543_07250 1d1865050033e48d62e56a9e6e00bbc8 178 SMART SM00014 62 171 6.4E-13 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL543_07250 1d1865050033e48d62e56a9e6e00bbc8 178 Pfam PF01569 PAP2 superfamily 65 175 4.5E-20 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL543_19955 d2a17da2eadaad5598f61bdf08350a42 348 Gene3D G3DSA:1.10.220.30 211 348 1.5E-43 T 11-10-2018 AL543_19955 d2a17da2eadaad5598f61bdf08350a42 348 Pfam PF01706 FliG C-terminal domain 234 340 2.7E-41 T 11-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal AL543_19955 d2a17da2eadaad5598f61bdf08350a42 348 SUPERFAMILY SSF48029 130 341 3.92E-67 T 11-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical AL543_19955 d2a17da2eadaad5598f61bdf08350a42 348 Pfam PF14841 FliG middle domain 131 203 9.6E-25 T 11-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain AL543_19955 d2a17da2eadaad5598f61bdf08350a42 348 Gene3D G3DSA:1.10.220.30 17 102 4.6E-17 T 11-10-2018 AL543_19955 d2a17da2eadaad5598f61bdf08350a42 348 Gene3D G3DSA:1.10.220.30 104 209 5.8E-28 T 11-10-2018 AL543_19955 d2a17da2eadaad5598f61bdf08350a42 348 Pfam PF14842 FliG N-terminal domain 22 121 6.4E-27 T 11-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain AL543_19955 d2a17da2eadaad5598f61bdf08350a42 348 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 17 346 1.3E-94 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL543_19955 d2a17da2eadaad5598f61bdf08350a42 348 SUPERFAMILY SSF48029 19 132 2.35E-19 T 11-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical AL543_19955 d2a17da2eadaad5598f61bdf08350a42 348 PIRSF PIRSF003161 16 348 9.6E-112 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL543_19955 d2a17da2eadaad5598f61bdf08350a42 348 PRINTS PR00954 Flagellar motor switch protein FliG signature 21 37 1.8E-57 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL543_19955 d2a17da2eadaad5598f61bdf08350a42 348 PRINTS PR00954 Flagellar motor switch protein FliG signature 50 76 1.8E-57 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL543_19955 d2a17da2eadaad5598f61bdf08350a42 348 PRINTS PR00954 Flagellar motor switch protein FliG signature 264 284 1.8E-57 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL543_19955 d2a17da2eadaad5598f61bdf08350a42 348 PRINTS PR00954 Flagellar motor switch protein FliG signature 130 153 1.8E-57 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL543_19955 d2a17da2eadaad5598f61bdf08350a42 348 PRINTS PR00954 Flagellar motor switch protein FliG signature 211 236 1.8E-57 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL543_19955 d2a17da2eadaad5598f61bdf08350a42 348 PRINTS PR00954 Flagellar motor switch protein FliG signature 242 262 1.8E-57 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL543_19955 d2a17da2eadaad5598f61bdf08350a42 348 PRINTS PR00954 Flagellar motor switch protein FliG signature 288 314 1.8E-57 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL543_14300 02c17fa0a79d7e8f3c2a8c68f1b123c5 683 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 26 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL543_14300 02c17fa0a79d7e8f3c2a8c68f1b123c5 683 Gene3D G3DSA:2.40.50.140 573 683 5.2E-35 T 11-10-2018 AL543_14300 02c17fa0a79d7e8f3c2a8c68f1b123c5 683 Gene3D G3DSA:2.20.28.20 142 176 5.6E-161 T 11-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AL543_14300 02c17fa0a79d7e8f3c2a8c68f1b123c5 683 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 9 535 3.8E-201 T 11-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AL543_14300 02c17fa0a79d7e8f3c2a8c68f1b123c5 683 Gene3D G3DSA:1.10.730.10 389 526 1.8E-34 T 11-10-2018 AL543_14300 02c17fa0a79d7e8f3c2a8c68f1b123c5 683 Gene3D G3DSA:3.40.50.620 9 384 5.6E-161 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL543_14300 02c17fa0a79d7e8f3c2a8c68f1b123c5 683 Pfam PF01588 Putative tRNA binding domain 588 680 6.0E-25 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 AL543_14300 02c17fa0a79d7e8f3c2a8c68f1b123c5 683 PRINTS PR01041 Methionyl-tRNA synthetase signature 251 262 6.6E-25 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AL543_14300 02c17fa0a79d7e8f3c2a8c68f1b123c5 683 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 6.6E-25 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AL543_14300 02c17fa0a79d7e8f3c2a8c68f1b123c5 683 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 6.6E-25 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AL543_14300 02c17fa0a79d7e8f3c2a8c68f1b123c5 683 PRINTS PR01041 Methionyl-tRNA synthetase signature 384 395 6.6E-25 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AL543_14300 02c17fa0a79d7e8f3c2a8c68f1b123c5 683 PRINTS PR01041 Methionyl-tRNA synthetase signature 291 306 6.6E-25 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AL543_14300 02c17fa0a79d7e8f3c2a8c68f1b123c5 683 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 6.6E-25 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AL543_14300 02c17fa0a79d7e8f3c2a8c68f1b123c5 683 SUPERFAMILY SSF47323 389 546 1.46E-44 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL543_14300 02c17fa0a79d7e8f3c2a8c68f1b123c5 683 SUPERFAMILY SSF50249 578 682 9.55E-33 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL543_14300 02c17fa0a79d7e8f3c2a8c68f1b123c5 683 SUPERFAMILY SSF57770 142 176 5.89E-13 T 11-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AL543_14300 02c17fa0a79d7e8f3c2a8c68f1b123c5 683 SUPERFAMILY SSF52374 4 387 6.66E-101 T 11-10-2018 AL543_14300 02c17fa0a79d7e8f3c2a8c68f1b123c5 683 Hamap MF_00098 Methionine--tRNA ligase [metG]. 6 545 41.436 T 11-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AL543_14300 02c17fa0a79d7e8f3c2a8c68f1b123c5 683 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 542 682 7.9E-48 T 11-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AL543_14300 02c17fa0a79d7e8f3c2a8c68f1b123c5 683 Pfam PF09334 tRNA synthetases class I (M) 9 396 8.6E-165 T 11-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL543_15520 0f57cccc046ceb523e98b68293604819 342 SUPERFAMILY SSF53187 9 329 1.65E-78 T 11-10-2018 AL543_15520 0f57cccc046ceb523e98b68293604819 342 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 342 132.624 T 11-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 AL543_15520 0f57cccc046ceb523e98b68293604819 342 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 53 330 2.2E-75 T 11-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 AL543_15520 0f57cccc046ceb523e98b68293604819 342 PIRSF PIRSF017020 4 336 5.9E-121 T 11-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 AL543_15520 0f57cccc046ceb523e98b68293604819 342 Gene3D G3DSA:3.40.630.10 1 342 1.4E-122 T 11-10-2018 AL543_16155 21ec4b266a29a1e0ffd6b481f3895a8a 401 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 91 155 3.6E-17 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 AL543_16155 21ec4b266a29a1e0ffd6b481f3895a8a 401 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 233 396 7.6E-13 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL543_16155 21ec4b266a29a1e0ffd6b481f3895a8a 401 Gene3D G3DSA:1.10.3720.10 79 182 5.2E-16 T 11-10-2018 IPR035906 MetI-like superfamily AL543_16155 21ec4b266a29a1e0ffd6b481f3895a8a 401 Gene3D G3DSA:1.10.3720.10 188 397 1.6E-31 T 11-10-2018 IPR035906 MetI-like superfamily AL543_16155 21ec4b266a29a1e0ffd6b481f3895a8a 401 SUPERFAMILY SSF161098 193 382 2.75E-24 T 11-10-2018 IPR035906 MetI-like superfamily AL543_16155 21ec4b266a29a1e0ffd6b481f3895a8a 401 SUPERFAMILY SSF161098 91 159 2.75E-12 T 11-10-2018 IPR035906 MetI-like superfamily AL543_02090 442c00a754c056e15e385a267ca6d001 589 Pfam PF05947 Type VI secretion system, TssF 5 588 2.3E-198 T 11-10-2018 IPR010272 Type VI secretion system, TssF-like AL543_02090 442c00a754c056e15e385a267ca6d001 589 PIRSF PIRSF028304 1 589 1.6E-187 T 11-10-2018 IPR010272 Type VI secretion system, TssF-like AL543_02090 442c00a754c056e15e385a267ca6d001 589 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 589 2.5E-208 T 11-10-2018 IPR010272 Type VI secretion system, TssF-like AL543_17600 56590a352e14dc24bbc530e3ef5ea17e 365 Pfam PF12698 ABC-2 family transporter protein 24 356 1.0E-45 T 11-10-2018 AL543_17600 56590a352e14dc24bbc530e3ef5ea17e 365 PRINTS PR00164 ABC-2 type transport system membrane protein signature 250 274 9.0E-7 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AL543_17600 56590a352e14dc24bbc530e3ef5ea17e 365 PRINTS PR00164 ABC-2 type transport system membrane protein signature 307 326 9.0E-7 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AL543_17600 56590a352e14dc24bbc530e3ef5ea17e 365 PRINTS PR00164 ABC-2 type transport system membrane protein signature 287 306 9.0E-7 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AL543_06690 4109e8ae0005495bb5f5eb256b8d7d49 470 Gene3D G3DSA:3.50.50.60 247 398 1.0E-44 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_06690 4109e8ae0005495bb5f5eb256b8d7d49 470 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 2.2E-36 T 11-10-2018 AL543_06690 4109e8ae0005495bb5f5eb256b8d7d49 470 PRINTS PR00419 Adrenodoxin reductase family signature 288 302 2.2E-36 T 11-10-2018 AL543_06690 4109e8ae0005495bb5f5eb256b8d7d49 470 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 2.2E-36 T 11-10-2018 AL543_06690 4109e8ae0005495bb5f5eb256b8d7d49 470 PRINTS PR00419 Adrenodoxin reductase family signature 322 335 2.2E-36 T 11-10-2018 AL543_06690 4109e8ae0005495bb5f5eb256b8d7d49 470 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 2.2E-36 T 11-10-2018 AL543_06690 4109e8ae0005495bb5f5eb256b8d7d49 470 Gene3D G3DSA:3.50.50.60 147 237 7.9E-10 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_06690 4109e8ae0005495bb5f5eb256b8d7d49 470 Gene3D G3DSA:1.10.1060.10 12 146 2.8E-35 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL543_06690 4109e8ae0005495bb5f5eb256b8d7d49 470 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 457 1.1E-23 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL543_06690 4109e8ae0005495bb5f5eb256b8d7d49 470 SUPERFAMILY SSF46548 6 157 1.83E-41 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL543_06690 4109e8ae0005495bb5f5eb256b8d7d49 470 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 470 1.8E-251 T 11-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 AL543_06690 4109e8ae0005495bb5f5eb256b8d7d49 470 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 134 7.2E-39 T 11-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 AL543_06690 4109e8ae0005495bb5f5eb256b8d7d49 470 SUPERFAMILY SSF51971 145 399 7.65E-69 T 11-10-2018 AL543_19770 c1e8512d878e6127be542cc2f60bf9fc 429 Gene3D G3DSA:2.20.28.60 1 50 4.4E-26 T 11-10-2018 AL543_19770 c1e8512d878e6127be542cc2f60bf9fc 429 Pfam PF00285 Citrate synthase, C-terminal domain 49 411 4.0E-136 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AL543_19770 c1e8512d878e6127be542cc2f60bf9fc 429 PRINTS PR00143 Citrate synthase signature 241 269 3.6E-55 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AL543_19770 c1e8512d878e6127be542cc2f60bf9fc 429 PRINTS PR00143 Citrate synthase signature 296 316 3.6E-55 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AL543_19770 c1e8512d878e6127be542cc2f60bf9fc 429 PRINTS PR00143 Citrate synthase signature 219 234 3.6E-55 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AL543_19770 c1e8512d878e6127be542cc2f60bf9fc 429 PRINTS PR00143 Citrate synthase signature 359 375 3.6E-55 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AL543_19770 c1e8512d878e6127be542cc2f60bf9fc 429 PRINTS PR00143 Citrate synthase signature 165 178 3.6E-55 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AL543_19770 c1e8512d878e6127be542cc2f60bf9fc 429 PRINTS PR00143 Citrate synthase signature 379 393 3.6E-55 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AL543_19770 c1e8512d878e6127be542cc2f60bf9fc 429 SUPERFAMILY SSF48256 4 428 8.9E-171 T 11-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 AL543_19770 c1e8512d878e6127be542cc2f60bf9fc 429 Gene3D G3DSA:1.10.230.10 268 376 1.4E-150 T 11-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain AL543_19770 c1e8512d878e6127be542cc2f60bf9fc 429 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 11-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AL543_19770 c1e8512d878e6127be542cc2f60bf9fc 429 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 15 422 3.6E-239 T 11-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 AL543_19770 c1e8512d878e6127be542cc2f60bf9fc 429 PIRSF PIRSF001369 38 429 1.5E-173 T 11-10-2018 IPR024176 Citrate synthase, bacterial-type AL543_19770 c1e8512d878e6127be542cc2f60bf9fc 429 Gene3D G3DSA:1.10.580.10 57 411 1.4E-150 T 11-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AL543_09460 0da468bd337d8368d12e9a1b4a24f5bb 467 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 467 1.8E-247 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 AL543_09460 0da468bd337d8368d12e9a1b4a24f5bb 467 Gene3D G3DSA:2.40.10.170 2 75 7.7E-29 T 11-10-2018 AL543_09460 0da468bd337d8368d12e9a1b4a24f5bb 467 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 467 55.945 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 AL543_09460 0da468bd337d8368d12e9a1b4a24f5bb 467 Gene3D G3DSA:3.40.50.300 76 351 4.5E-111 T 11-10-2018 AL543_09460 0da468bd337d8368d12e9a1b4a24f5bb 467 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 340 349 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL543_09460 0da468bd337d8368d12e9a1b4a24f5bb 467 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 349 1.9E-61 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL543_09460 0da468bd337d8368d12e9a1b4a24f5bb 467 SMART SM00382 142 334 2.8E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_09460 0da468bd337d8368d12e9a1b4a24f5bb 467 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 73 2.3E-19 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL543_09460 0da468bd337d8368d12e9a1b4a24f5bb 467 SUPERFAMILY SSF47917 352 466 3.4E-50 T 11-10-2018 AL543_09460 0da468bd337d8368d12e9a1b4a24f5bb 467 SUPERFAMILY SSF50615 1 75 1.65E-24 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL543_09460 0da468bd337d8368d12e9a1b4a24f5bb 467 Gene3D G3DSA:1.10.1140.10 352 467 4.8E-53 T 11-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL543_09460 0da468bd337d8368d12e9a1b4a24f5bb 467 SUPERFAMILY SSF52540 77 355 5.33E-87 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_11100 88053a7c4b883afaa8e2d5f9690be6a1 451 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 6 449 3.6E-122 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AL543_11100 88053a7c4b883afaa8e2d5f9690be6a1 451 SUPERFAMILY SSF55021 298 394 3.27E-19 T 11-10-2018 AL543_11100 88053a7c4b883afaa8e2d5f9690be6a1 451 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 6 449 4.0E-122 T 11-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AL543_11100 88053a7c4b883afaa8e2d5f9690be6a1 451 Gene3D G3DSA:1.20.120.1320 42 135 4.8E-100 T 11-10-2018 AL543_11100 88053a7c4b883afaa8e2d5f9690be6a1 451 Pfam PF00696 Amino acid kinase family 6 278 5.4E-48 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AL543_11100 88053a7c4b883afaa8e2d5f9690be6a1 451 Gene3D G3DSA:3.30.70.260 310 383 2.2E-47 T 11-10-2018 AL543_11100 88053a7c4b883afaa8e2d5f9690be6a1 451 Gene3D G3DSA:3.40.1160.10 6 290 4.8E-100 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AL543_11100 88053a7c4b883afaa8e2d5f9690be6a1 451 Gene3D G3DSA:3.30.70.260 304 447 2.2E-47 T 11-10-2018 AL543_11100 88053a7c4b883afaa8e2d5f9690be6a1 451 ProSitePatterns PS00324 Aspartokinase signature. 6 14 - T 11-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AL543_11100 88053a7c4b883afaa8e2d5f9690be6a1 451 SUPERFAMILY SSF53633 6 293 3.8E-77 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AL543_11100 88053a7c4b883afaa8e2d5f9690be6a1 451 PIRSF PIRSF000726 2 451 2.5E-126 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AL543_11100 88053a7c4b883afaa8e2d5f9690be6a1 451 SUPERFAMILY SSF55021 377 449 1.03E-14 T 11-10-2018 AL543_10205 f3f9ecd344ab5e0f9c6610757e3f4ddd 269 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 11-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 AL543_10205 f3f9ecd344ab5e0f9c6610757e3f4ddd 269 Gene3D G3DSA:1.10.8.50 131 269 5.5E-48 T 11-10-2018 AL543_10205 f3f9ecd344ab5e0f9c6610757e3f4ddd 269 SMART SM00898 2 115 3.8E-51 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AL543_10205 f3f9ecd344ab5e0f9c6610757e3f4ddd 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 2.4E-28 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AL543_10205 f3f9ecd344ab5e0f9c6610757e3f4ddd 269 SUPERFAMILY SSF46946 130 222 8.68E-31 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AL543_10205 f3f9ecd344ab5e0f9c6610757e3f4ddd 269 SUPERFAMILY SSF57716 217 268 5.13E-16 T 11-10-2018 AL543_10205 f3f9ecd344ab5e0f9c6610757e3f4ddd 269 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 9.6E-96 T 11-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 AL543_10205 f3f9ecd344ab5e0f9c6610757e3f4ddd 269 Pfam PF06827 Zinc finger found in FPG and IleRS 242 269 9.4E-7 T 11-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 AL543_10205 f3f9ecd344ab5e0f9c6610757e3f4ddd 269 SUPERFAMILY SSF81624 2 138 1.44E-38 T 11-10-2018 IPR035937 MutM-like, N-terminal AL543_10205 f3f9ecd344ab5e0f9c6610757e3f4ddd 269 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 43.702 T 11-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 AL543_10205 f3f9ecd344ab5e0f9c6610757e3f4ddd 269 Gene3D G3DSA:3.20.190.10 2 127 7.7E-41 T 11-10-2018 IPR035937 MutM-like, N-terminal AL543_10205 f3f9ecd344ab5e0f9c6610757e3f4ddd 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 6.5E-30 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AL543_10205 f3f9ecd344ab5e0f9c6610757e3f4ddd 269 SMART SM01232 129 221 2.3E-47 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AL543_09145 cdbba27f1eda656cd17aa9cb93a42a26 525 Pfam PF06527 TniQ 4 150 1.6E-9 T 11-10-2018 IPR009492 TniQ AL543_09145 cdbba27f1eda656cd17aa9cb93a42a26 525 SUPERFAMILY SSF46689 346 436 8.24E-5 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_09145 cdbba27f1eda656cd17aa9cb93a42a26 525 Pfam PF15978 Tn7-like transposition protein D 336 513 1.2E-21 T 11-10-2018 IPR032750 Transposon Tn7 transposition protein TnsD, C-termianl AL543_06525 a4a77ee2fab0034b8db7c303470bea10 458 Pfam PF13541 Subunit ChlI of Mg-chelatase 346 431 4.3E-9 T 11-10-2018 AL543_06525 a4a77ee2fab0034b8db7c303470bea10 458 SUPERFAMILY SSF52540 69 290 3.87E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_06525 a4a77ee2fab0034b8db7c303470bea10 458 SMART SM00382 92 245 9.2E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_06525 a4a77ee2fab0034b8db7c303470bea10 458 PRINTS PR01874 DNA repair protein radA signature 249 275 1.2E-93 T 11-10-2018 AL543_06525 a4a77ee2fab0034b8db7c303470bea10 458 PRINTS PR01874 DNA repair protein radA signature 10 34 1.2E-93 T 11-10-2018 AL543_06525 a4a77ee2fab0034b8db7c303470bea10 458 PRINTS PR01874 DNA repair protein radA signature 84 112 1.2E-93 T 11-10-2018 AL543_06525 a4a77ee2fab0034b8db7c303470bea10 458 PRINTS PR01874 DNA repair protein radA signature 175 199 1.2E-93 T 11-10-2018 AL543_06525 a4a77ee2fab0034b8db7c303470bea10 458 PRINTS PR01874 DNA repair protein radA signature 214 242 1.2E-93 T 11-10-2018 AL543_06525 a4a77ee2fab0034b8db7c303470bea10 458 PRINTS PR01874 DNA repair protein radA signature 125 142 1.2E-93 T 11-10-2018 AL543_06525 a4a77ee2fab0034b8db7c303470bea10 458 PRINTS PR01874 DNA repair protein radA signature 323 346 1.2E-93 T 11-10-2018 AL543_06525 a4a77ee2fab0034b8db7c303470bea10 458 Gene3D G3DSA:3.40.50.300 67 279 1.7E-39 T 11-10-2018 AL543_06525 a4a77ee2fab0034b8db7c303470bea10 458 Pfam PF13481 AAA domain 82 223 4.7E-13 T 11-10-2018 AL543_06525 a4a77ee2fab0034b8db7c303470bea10 458 Hamap MF_01498 DNA repair protein RadA [radA]. 21 456 42.729 T 11-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 AL543_06525 a4a77ee2fab0034b8db7c303470bea10 458 TIGRFAM TIGR00416 sms: DNA repair protein RadA 2 452 2.2E-223 T 11-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 AL543_06525 a4a77ee2fab0034b8db7c303470bea10 458 Gene3D G3DSA:3.30.230.10 317 457 3.5E-21 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL543_06525 a4a77ee2fab0034b8db7c303470bea10 458 SUPERFAMILY SSF54211 256 454 2.43E-42 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL543_05500 e25d43839dbf644c632360acd618a78f 100 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 91 6.6E-19 T 11-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AL543_05500 e25d43839dbf644c632360acd618a78f 100 Gene3D G3DSA:3.30.2310.20 1 96 2.9E-19 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily AL543_19485 c11331fcfa205a7c95e0f41678d0554a 601 Gene3D G3DSA:3.40.720.10 250 524 2.5E-37 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AL543_19485 c11331fcfa205a7c95e0f41678d0554a 601 Pfam PF00884 Sulfatase 265 514 1.7E-21 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 AL543_19485 c11331fcfa205a7c95e0f41678d0554a 601 PIRSF PIRSF004950 6 599 4.9E-246 T 11-10-2018 IPR012159 Inner membrane protein YejM AL543_19485 c11331fcfa205a7c95e0f41678d0554a 601 SUPERFAMILY SSF53649 259 581 3.78E-46 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AL543_19485 c11331fcfa205a7c95e0f41678d0554a 601 Pfam PF11893 Domain of unknown function (DUF3413) 6 251 4.6E-101 T 11-10-2018 IPR024588 Inner membrane protein YejM, N-terminal AL543_15975 c21e1e72151de483214d1ba7b9d15612 347 Pfam PF13358 DDE superfamily endonuclease 169 312 1.9E-34 T 11-10-2018 IPR038717 Tc1-like transposase, DDE domain AL543_15975 c21e1e72151de483214d1ba7b9d15612 347 Pfam PF13384 Homeodomain-like domain 28 67 4.3E-7 T 11-10-2018 AL543_15975 c21e1e72151de483214d1ba7b9d15612 347 Gene3D G3DSA:3.30.420.470 138 343 3.0E-12 T 11-10-2018 AL543_15975 c21e1e72151de483214d1ba7b9d15612 347 SUPERFAMILY SSF53098 221 317 2.28E-7 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_15975 c21e1e72151de483214d1ba7b9d15612 347 SUPERFAMILY SSF46689 16 131 8.96E-24 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_15975 c21e1e72151de483214d1ba7b9d15612 347 Pfam PF13592 Winged helix-turn helix 99 155 3.7E-18 T 11-10-2018 IPR025959 Winged helix-turn helix domain AL543_06420 a742d9ab55d71fa913b0c0692b7234ca 1148 Gene3D G3DSA:3.40.50.10930 4 322 1.4E-125 T 11-10-2018 AL543_06420 a742d9ab55d71fa913b0c0692b7234ca 1148 SUPERFAMILY SSF52540 367 810 1.06E-102 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_06420 a742d9ab55d71fa913b0c0692b7234ca 1148 SUPERFAMILY SSF52980 826 1135 8.58E-75 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AL543_06420 a742d9ab55d71fa913b0c0692b7234ca 1148 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 2 809 6.1E-297 T 11-10-2018 AL543_06420 a742d9ab55d71fa913b0c0692b7234ca 1148 SUPERFAMILY SSF52540 2 352 1.46E-122 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_06420 a742d9ab55d71fa913b0c0692b7234ca 1148 Gene3D G3DSA:3.40.50.300 340 811 4.0E-191 T 11-10-2018 AL543_06420 a742d9ab55d71fa913b0c0692b7234ca 1148 PIRSF PIRSF000980 1 1148 0.0 T 11-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 AL543_06420 a742d9ab55d71fa913b0c0692b7234ca 1148 Gene3D G3DSA:1.10.10.160 79 187 1.4E-125 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily AL543_06420 a742d9ab55d71fa913b0c0692b7234ca 1148 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1109 0.0 T 11-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 AL543_06420 a742d9ab55d71fa913b0c0692b7234ca 1148 Gene3D G3DSA:1.10.486.10 458 670 4.0E-191 T 11-10-2018 AL543_06420 a742d9ab55d71fa913b0c0692b7234ca 1148 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1146 20.764 T 11-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 AL543_06420 a742d9ab55d71fa913b0c0692b7234ca 1148 Gene3D G3DSA:1.10.10.990 872 948 1.3E-17 T 11-10-2018 AL543_06875 5519ad5c8d442d65a59b4aabe303cec8 317 Gene3D G3DSA:3.90.1640.10 12 195 8.9E-50 T 11-10-2018 AL543_06875 5519ad5c8d442d65a59b4aabe303cec8 317 Pfam PF01368 DHH family 16 148 1.8E-11 T 11-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AL543_06875 5519ad5c8d442d65a59b4aabe303cec8 317 SUPERFAMILY SSF64182 12 314 3.01E-57 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily AL543_06875 5519ad5c8d442d65a59b4aabe303cec8 317 SMART SM01131 187 314 3.5E-42 T 11-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AL543_06875 5519ad5c8d442d65a59b4aabe303cec8 317 Pfam PF02833 DHHA2 domain 189 313 1.6E-22 T 11-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AL543_06875 5519ad5c8d442d65a59b4aabe303cec8 317 Gene3D G3DSA:3.10.310.20 196 315 3.2E-34 T 11-10-2018 IPR038222 DHHA2 domain superfamily KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AL543_09735 4db18e5eda9dbbc9460ca415839aff62 458 SUPERFAMILY SSF116726 136 223 1.26E-9 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AL543_09735 4db18e5eda9dbbc9460ca415839aff62 458 Gene3D G3DSA:3.30.70.1450 140 232 2.1E-21 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AL543_09735 4db18e5eda9dbbc9460ca415839aff62 458 SUPERFAMILY SSF51735 232 376 2.47E-32 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_09735 4db18e5eda9dbbc9460ca415839aff62 458 SUPERFAMILY SSF116726 381 437 6.02E-7 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AL543_09735 4db18e5eda9dbbc9460ca415839aff62 458 SUPERFAMILY SSF51735 1 151 6.47E-36 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_09735 4db18e5eda9dbbc9460ca415839aff62 458 Gene3D G3DSA:3.30.70.1450 367 458 4.6E-28 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AL543_09735 4db18e5eda9dbbc9460ca415839aff62 458 Pfam PF02254 TrkA-N domain 3 115 5.0E-29 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AL543_09735 4db18e5eda9dbbc9460ca415839aff62 458 Pfam PF02254 TrkA-N domain 235 350 3.3E-24 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AL543_09735 4db18e5eda9dbbc9460ca415839aff62 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 3.9E-34 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AL543_09735 4db18e5eda9dbbc9460ca415839aff62 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 3.9E-34 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AL543_09735 4db18e5eda9dbbc9460ca415839aff62 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 3.9E-34 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AL543_09735 4db18e5eda9dbbc9460ca415839aff62 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 3.9E-34 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AL543_09735 4db18e5eda9dbbc9460ca415839aff62 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 3.9E-34 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AL543_09735 4db18e5eda9dbbc9460ca415839aff62 458 Gene3D G3DSA:3.40.50.720 233 366 2.0E-37 T 11-10-2018 AL543_09735 4db18e5eda9dbbc9460ca415839aff62 458 Pfam PF02080 TrkA-C domain 390 449 4.1E-9 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL543_09735 4db18e5eda9dbbc9460ca415839aff62 458 Pfam PF02080 TrkA-C domain 156 225 4.8E-11 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL543_09735 4db18e5eda9dbbc9460ca415839aff62 458 Gene3D G3DSA:3.40.50.720 2 139 1.4E-51 T 11-10-2018 AL543_07050 caeb8e9d4285cb03358569066bc035b4 433 SUPERFAMILY SSF54826 3 138 3.36E-56 T 11-10-2018 AL543_07050 caeb8e9d4285cb03358569066bc035b4 433 Pfam PF03952 Enolase, N-terminal domain 4 134 7.9E-58 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL543_07050 caeb8e9d4285cb03358569066bc035b4 433 PIRSF PIRSF001400 1 431 7.3E-193 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL543_07050 caeb8e9d4285cb03358569066bc035b4 433 SUPERFAMILY SSF51604 144 428 4.53E-128 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AL543_07050 caeb8e9d4285cb03358569066bc035b4 433 ProSitePatterns PS00164 Enolase signature. 340 353 - T 11-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_07050 caeb8e9d4285cb03358569066bc035b4 433 Hamap MF_00318 Enolase [eno]. 2 417 44.6 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL543_07050 caeb8e9d4285cb03358569066bc035b4 433 Gene3D G3DSA:3.30.390.10 3 127 2.1E-54 T 11-10-2018 IPR029017 Enolase-like, N-terminal AL543_07050 caeb8e9d4285cb03358569066bc035b4 433 Pfam PF00113 Enolase, C-terminal TIM barrel domain 145 430 5.6E-139 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL543_07050 caeb8e9d4285cb03358569066bc035b4 433 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 429 1.0E-207 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL543_07050 caeb8e9d4285cb03358569066bc035b4 433 Gene3D G3DSA:3.20.20.120 128 433 8.3E-134 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AL543_07050 caeb8e9d4285cb03358569066bc035b4 433 PRINTS PR00148 Enolase signature 369 386 4.0E-44 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL543_07050 caeb8e9d4285cb03358569066bc035b4 433 PRINTS PR00148 Enolase signature 317 328 4.0E-44 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL543_07050 caeb8e9d4285cb03358569066bc035b4 433 PRINTS PR00148 Enolase signature 165 178 4.0E-44 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL543_07050 caeb8e9d4285cb03358569066bc035b4 433 PRINTS PR00148 Enolase signature 340 354 4.0E-44 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL543_07050 caeb8e9d4285cb03358569066bc035b4 433 PRINTS PR00148 Enolase signature 37 51 4.0E-44 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL543_07050 caeb8e9d4285cb03358569066bc035b4 433 PRINTS PR00148 Enolase signature 107 123 4.0E-44 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL543_07050 caeb8e9d4285cb03358569066bc035b4 433 SMART SM01192 143 431 5.8E-213 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL543_07050 caeb8e9d4285cb03358569066bc035b4 433 SMART SM01193 4 134 2.5E-92 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL543_10340 2b45deb127f6e67ffcd46a1b204d777a 297 SUPERFAMILY SSF53756 46 234 2.83E-9 T 11-10-2018 AL543_10340 2b45deb127f6e67ffcd46a1b204d777a 297 Pfam PF13692 Glycosyl transferases group 1 149 238 2.6E-6 T 11-10-2018 AL543_10340 2b45deb127f6e67ffcd46a1b204d777a 297 Gene3D G3DSA:3.40.50.2000 122 268 5.4E-9 T 11-10-2018 AL543_18510 eeb34dbde0db7b2bf34fc573eb1a6a2f 477 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 371 475 1.7E-15 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_18510 eeb34dbde0db7b2bf34fc573eb1a6a2f 477 SUPERFAMILY SSF47384 259 320 1.1E-9 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL543_18510 eeb34dbde0db7b2bf34fc573eb1a6a2f 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 418 9.5E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_18510 eeb34dbde0db7b2bf34fc573eb1a6a2f 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 455 9.5E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_18510 eeb34dbde0db7b2bf34fc573eb1a6a2f 477 SMART SM00387 370 477 9.4E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_18510 eeb34dbde0db7b2bf34fc573eb1a6a2f 477 Gene3D G3DSA:3.30.565.10 334 476 6.3E-24 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_18510 eeb34dbde0db7b2bf34fc573eb1a6a2f 477 SUPERFAMILY SSF55874 333 475 2.1E-24 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_18510 eeb34dbde0db7b2bf34fc573eb1a6a2f 477 Gene3D G3DSA:1.10.287.130 226 332 4.5E-15 T 11-10-2018 AL543_09570 336c0c49f1e04f1543891e281dbbe9f7 248 SMART SM00062 24 245 3.8E-72 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL543_09570 336c0c49f1e04f1543891e281dbbe9f7 248 Gene3D G3DSA:3.40.190.10 91 203 8.4E-28 T 11-10-2018 AL543_09570 336c0c49f1e04f1543891e281dbbe9f7 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 25 243 1.9E-56 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL543_09570 336c0c49f1e04f1543891e281dbbe9f7 248 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 46 59 - T 11-10-2018 IPR018313 Solute-binding protein family 3, conserved site AL543_09570 336c0c49f1e04f1543891e281dbbe9f7 248 SUPERFAMILY SSF53850 1 246 1.81E-58 T 11-10-2018 AL543_09570 336c0c49f1e04f1543891e281dbbe9f7 248 SMART SM00079 24 244 0.0071 T 11-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AL543_06120 4d7fe7b26acb15101d65e37edd671f41 250 SUPERFAMILY SSF64005 7 233 2.09E-87 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 AL543_06120 4d7fe7b26acb15101d65e37edd671f41 250 Pfam PF01255 Putative undecaprenyl diphosphate synthase 18 238 1.6E-80 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AL543_06120 4d7fe7b26acb15101d65e37edd671f41 250 Gene3D G3DSA:3.40.1180.10 1 239 3.9E-94 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 AL543_06120 4d7fe7b26acb15101d65e37edd671f41 250 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 184 201 - T 11-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 AL543_06120 4d7fe7b26acb15101d65e37edd671f41 250 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 11 239 39.241 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AL543_06120 4d7fe7b26acb15101d65e37edd671f41 250 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 11 238 3.5E-94 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AL543_13545 5db0c866a769ae961bb5cfb933c6aa2b 100 Pfam PF11743 Protein of unknown function (DUF3301) 5 96 2.9E-30 T 11-10-2018 IPR021732 Protein of unknown function DUF3301 AL543_10730 b431fbd3d0615ba489daef97d344d70c 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 52 4.0E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL543_10730 b431fbd3d0615ba489daef97d344d70c 211 Gene3D G3DSA:1.10.357.10 1 210 1.5E-65 T 11-10-2018 AL543_10730 b431fbd3d0615ba489daef97d344d70c 211 SUPERFAMILY SSF46689 3 72 3.3E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_10730 b431fbd3d0615ba489daef97d344d70c 211 Pfam PF13972 Bacterial transcriptional repressor 57 199 4.4E-42 T 11-10-2018 IPR025722 Bacterial transcriptional repressor TetR AL543_10730 b431fbd3d0615ba489daef97d344d70c 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 8.2E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL543_10730 b431fbd3d0615ba489daef97d344d70c 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 8.2E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL543_20160 1e04116fc63f68ef7622fd86d5147737 419 SUPERFAMILY SSF51735 161 313 1.71E-36 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_20160 1e04116fc63f68ef7622fd86d5147737 419 SUPERFAMILY SSF69742 1 156 2.22E-48 T 11-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AL543_20160 1e04116fc63f68ef7622fd86d5147737 419 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 416 30.588 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AL543_20160 1e04116fc63f68ef7622fd86d5147737 419 SUPERFAMILY SSF69075 315 416 2.22E-27 T 11-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AL543_20160 1e04116fc63f68ef7622fd86d5147737 419 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 154 7.4E-52 T 11-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AL543_20160 1e04116fc63f68ef7622fd86d5147737 419 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 415 6.4E-145 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AL543_20160 1e04116fc63f68ef7622fd86d5147737 419 Gene3D G3DSA:3.30.460.30 1 156 1.6E-58 T 11-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AL543_20160 1e04116fc63f68ef7622fd86d5147737 419 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 318 413 1.9E-22 T 11-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AL543_20160 1e04116fc63f68ef7622fd86d5147737 419 PIRSF PIRSF000445 1 419 1.4E-156 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AL543_20160 1e04116fc63f68ef7622fd86d5147737 419 Gene3D G3DSA:3.40.50.720 159 311 7.7E-44 T 11-10-2018 AL543_20160 1e04116fc63f68ef7622fd86d5147737 419 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 170 304 2.1E-49 T 11-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AL543_20160 1e04116fc63f68ef7622fd86d5147737 419 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 97 120 - T 11-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AL543_20535 192b47cd1d077843db4ecc0e623d8700 252 SUPERFAMILY SSF56281 2 252 4.19E-70 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AL543_20535 192b47cd1d077843db4ecc0e623d8700 252 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 252 1.1E-103 T 11-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AL543_20535 192b47cd1d077843db4ecc0e623d8700 252 SMART SM00849 12 166 4.2E-32 T 11-10-2018 IPR001279 Metallo-beta-lactamase AL543_20535 192b47cd1d077843db4ecc0e623d8700 252 PIRSF PIRSF005457 1 252 5.8E-97 T 11-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AL543_20535 192b47cd1d077843db4ecc0e623d8700 252 Pfam PF00753 Metallo-beta-lactamase superfamily 14 166 1.0E-20 T 11-10-2018 IPR001279 Metallo-beta-lactamase AL543_20535 192b47cd1d077843db4ecc0e623d8700 252 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 252 45.077 T 11-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AL543_20535 192b47cd1d077843db4ecc0e623d8700 252 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 167 252 8.2E-27 T 11-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AL543_20535 192b47cd1d077843db4ecc0e623d8700 252 Gene3D G3DSA:3.60.15.10 1 252 1.3E-94 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AL543_04220 5cbe2ac1dabb57156d7a62bbde53ff0f 162 Gene3D G3DSA:3.10.290.10 12 85 5.1E-22 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AL543_04220 5cbe2ac1dabb57156d7a62bbde53ff0f 162 Pfam PF13275 S4 domain 20 83 2.8E-23 T 11-10-2018 AL543_04220 5cbe2ac1dabb57156d7a62bbde53ff0f 162 SUPERFAMILY SSF55174 10 84 1.83E-19 T 11-10-2018 AL543_19730 6eaa950ce3eca1279799efe18088c5a8 290 Pfam PF02629 CoA binding domain 6 99 3.0E-31 T 11-10-2018 IPR003781 CoA-binding GO:0048037 AL543_19730 6eaa950ce3eca1279799efe18088c5a8 290 Gene3D G3DSA:3.40.50.720 1 123 3.8E-51 T 11-10-2018 AL543_19730 6eaa950ce3eca1279799efe18088c5a8 290 SMART SM00881 4 100 6.8E-36 T 11-10-2018 IPR003781 CoA-binding GO:0048037 AL543_19730 6eaa950ce3eca1279799efe18088c5a8 290 Pfam PF00549 CoA-ligase 151 270 4.9E-21 T 11-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL543_19730 6eaa950ce3eca1279799efe18088c5a8 290 SUPERFAMILY SSF51735 1 122 1.09E-42 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_19730 6eaa950ce3eca1279799efe18088c5a8 290 SUPERFAMILY SSF52210 123 286 1.44E-56 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL543_19730 6eaa950ce3eca1279799efe18088c5a8 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 11-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site AL543_19730 6eaa950ce3eca1279799efe18088c5a8 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 287 7.1E-145 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AL543_19730 6eaa950ce3eca1279799efe18088c5a8 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.4E-40 T 11-10-2018 AL543_19730 6eaa950ce3eca1279799efe18088c5a8 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.4E-40 T 11-10-2018 AL543_19730 6eaa950ce3eca1279799efe18088c5a8 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.4E-40 T 11-10-2018 AL543_19730 6eaa950ce3eca1279799efe18088c5a8 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.4E-40 T 11-10-2018 AL543_19730 6eaa950ce3eca1279799efe18088c5a8 290 PIRSF PIRSF001553 1 289 2.0E-133 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AL543_19730 6eaa950ce3eca1279799efe18088c5a8 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 11-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site AL543_19730 6eaa950ce3eca1279799efe18088c5a8 290 Gene3D G3DSA:3.40.50.261 124 288 7.0E-76 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL543_19730 6eaa950ce3eca1279799efe18088c5a8 290 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 43.055 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AL543_14370 ff07b7e21cea93c4d78666c07d4b2ed7 370 Gene3D G3DSA:3.60.40.10 167 350 6.0E-8 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AL543_14370 ff07b7e21cea93c4d78666c07d4b2ed7 370 Gene3D G3DSA:3.40.50.2300 16 153 5.6E-34 T 11-10-2018 AL543_14370 ff07b7e21cea93c4d78666c07d4b2ed7 370 SMART SM00448 25 137 1.3E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_14370 ff07b7e21cea93c4d78666c07d4b2ed7 370 SUPERFAMILY SSF52172 27 143 1.57E-32 T 11-10-2018 IPR011006 CheY-like superfamily AL543_14370 ff07b7e21cea93c4d78666c07d4b2ed7 370 Pfam PF00072 Response regulator receiver domain 27 129 3.2E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_01490 550d87648166dff9ba48a9c3e1996fd3 408 Pfam PF03616 Sodium/glutamate symporter 5 376 1.3E-153 T 11-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AL543_01490 550d87648166dff9ba48a9c3e1996fd3 408 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 9 407 3.4E-130 T 11-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AL543_01490 550d87648166dff9ba48a9c3e1996fd3 408 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 5 407 23.825 T 11-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AL543_15865 4979ddb023590c6e9248d8ef49a6a48c 458 SUPERFAMILY SSF56322 8 457 3.92E-143 T 11-10-2018 IPR005801 ADC synthase GO:0009058 AL543_15865 4979ddb023590c6e9248d8ef49a6a48c 458 Pfam PF04715 Anthranilate synthase component I, N terminal region 24 156 7.0E-27 T 11-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL543_15865 4979ddb023590c6e9248d8ef49a6a48c 458 PRINTS PR00095 Anthranilate synthase component I signature 390 404 2.7E-18 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL543_15865 4979ddb023590c6e9248d8ef49a6a48c 458 PRINTS PR00095 Anthranilate synthase component I signature 296 309 2.7E-18 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL543_15865 4979ddb023590c6e9248d8ef49a6a48c 458 PRINTS PR00095 Anthranilate synthase component I signature 310 323 2.7E-18 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL543_15865 4979ddb023590c6e9248d8ef49a6a48c 458 PRINTS PR00095 Anthranilate synthase component I signature 405 419 2.7E-18 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL543_15865 4979ddb023590c6e9248d8ef49a6a48c 458 Gene3D G3DSA:3.60.120.10 5 458 2.3E-170 T 11-10-2018 IPR005801 ADC synthase GO:0009058 AL543_15865 4979ddb023590c6e9248d8ef49a6a48c 458 Pfam PF00425 chorismate binding enzyme 196 448 2.0E-95 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AL543_15865 4979ddb023590c6e9248d8ef49a6a48c 458 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 110 450 1.1E-122 T 11-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 AL543_15275 131cdba6093531ed816dd939afb1d197 337 Gene3D G3DSA:1.25.40.10 17 169 6.1E-25 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_15275 131cdba6093531ed816dd939afb1d197 337 Gene3D G3DSA:1.10.287.110 265 337 1.7E-12 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AL543_15275 131cdba6093531ed816dd939afb1d197 337 SMART SM00671 34 69 3.8E-9 T 11-10-2018 IPR006597 Sel1-like repeat AL543_15275 131cdba6093531ed816dd939afb1d197 337 SMART SM00671 70 105 0.24 T 11-10-2018 IPR006597 Sel1-like repeat AL543_15275 131cdba6093531ed816dd939afb1d197 337 SUPERFAMILY SSF81901 25 175 1.7E-21 T 11-10-2018 AL543_15275 131cdba6093531ed816dd939afb1d197 337 Pfam PF08238 Sel1 repeat 70 101 0.025 T 11-10-2018 IPR006597 Sel1-like repeat AL543_15275 131cdba6093531ed816dd939afb1d197 337 Pfam PF08238 Sel1 repeat 34 69 9.6E-10 T 11-10-2018 IPR006597 Sel1-like repeat AL543_15275 131cdba6093531ed816dd939afb1d197 337 SUPERFAMILY SSF46565 276 331 2.09E-12 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AL543_19315 fee35ddc7cc528c8a542b5fe1613f176 481 Gene3D G3DSA:3.40.1380.20 342 476 1.5E-155 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL543_19315 fee35ddc7cc528c8a542b5fe1613f176 481 PRINTS PR01050 Pyruvate kinase family signature 63 79 1.3E-54 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL543_19315 fee35ddc7cc528c8a542b5fe1613f176 481 PRINTS PR01050 Pyruvate kinase family signature 300 318 1.3E-54 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL543_19315 fee35ddc7cc528c8a542b5fe1613f176 481 PRINTS PR01050 Pyruvate kinase family signature 319 335 1.3E-54 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL543_19315 fee35ddc7cc528c8a542b5fe1613f176 481 PRINTS PR01050 Pyruvate kinase family signature 250 274 1.3E-54 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL543_19315 fee35ddc7cc528c8a542b5fe1613f176 481 PRINTS PR01050 Pyruvate kinase family signature 275 299 1.3E-54 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL543_19315 fee35ddc7cc528c8a542b5fe1613f176 481 PRINTS PR01050 Pyruvate kinase family signature 223 249 1.3E-54 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL543_19315 fee35ddc7cc528c8a542b5fe1613f176 481 PRINTS PR01050 Pyruvate kinase family signature 190 204 1.3E-54 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL543_19315 fee35ddc7cc528c8a542b5fe1613f176 481 SUPERFAMILY SSF50800 74 169 9.77E-24 T 11-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily AL543_19315 fee35ddc7cc528c8a542b5fe1613f176 481 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 479 1.2E-167 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL543_19315 fee35ddc7cc528c8a542b5fe1613f176 481 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 11-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL543_19315 fee35ddc7cc528c8a542b5fe1613f176 481 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 478 1.6E-29 T 11-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL543_19315 fee35ddc7cc528c8a542b5fe1613f176 481 Gene3D G3DSA:2.40.33.10 74 172 1.5E-155 T 11-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL543_19315 fee35ddc7cc528c8a542b5fe1613f176 481 Gene3D G3DSA:3.20.20.60 6 341 1.5E-155 T 11-10-2018 AL543_19315 fee35ddc7cc528c8a542b5fe1613f176 481 SUPERFAMILY SSF51621 4 346 7.07E-89 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AL543_19315 fee35ddc7cc528c8a542b5fe1613f176 481 Pfam PF00224 Pyruvate kinase, barrel domain 6 349 1.8E-130 T 11-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL543_19315 fee35ddc7cc528c8a542b5fe1613f176 481 SUPERFAMILY SSF52935 329 480 8.77E-38 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL543_07745 c64e84a21ea193c60919b0917a171753 444 PIRSF PIRSF004557 11 442 1.2E-120 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AL543_07745 c64e84a21ea193c60919b0917a171753 444 ProSitePatterns PS00756 Protein secY signature 2. 171 188 - T 11-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AL543_07745 c64e84a21ea193c60919b0917a171753 444 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 11-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AL543_07745 c64e84a21ea193c60919b0917a171753 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 3.3E-95 T 11-10-2018 AL543_07745 c64e84a21ea193c60919b0917a171753 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 371 389 3.3E-95 T 11-10-2018 AL543_07745 c64e84a21ea193c60919b0917a171753 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 403 421 3.3E-95 T 11-10-2018 AL543_07745 c64e84a21ea193c60919b0917a171753 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 152 177 3.3E-95 T 11-10-2018 AL543_07745 c64e84a21ea193c60919b0917a171753 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 178 201 3.3E-95 T 11-10-2018 AL543_07745 c64e84a21ea193c60919b0917a171753 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 3.3E-95 T 11-10-2018 AL543_07745 c64e84a21ea193c60919b0917a171753 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 316 338 3.3E-95 T 11-10-2018 AL543_07745 c64e84a21ea193c60919b0917a171753 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 3.3E-95 T 11-10-2018 AL543_07745 c64e84a21ea193c60919b0917a171753 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 270 289 3.3E-95 T 11-10-2018 AL543_07745 c64e84a21ea193c60919b0917a171753 444 Gene3D G3DSA:1.10.3370.10 10 430 7.7E-160 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AL543_07745 c64e84a21ea193c60919b0917a171753 444 SUPERFAMILY SSF103491 15 425 3.27E-130 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AL543_07745 c64e84a21ea193c60919b0917a171753 444 Pfam PF00344 SecY translocase 76 418 2.1E-117 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AL543_07745 c64e84a21ea193c60919b0917a171753 444 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 430 4.9E-134 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AL543_07745 c64e84a21ea193c60919b0917a171753 444 Hamap MF_01465 Protein translocase subunit SecY [secY]. 9 434 29.166 T 11-10-2018 IPR026593 Protein translocase subunit SecY AL543_09450 8dd2fc1a16b7a41a0ee3dd3a43dd2d5b 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 392 426 2.7E-9 T 11-10-2018 IPR001451 Hexapeptide repeat AL543_09450 8dd2fc1a16b7a41a0ee3dd3a43dd2d5b 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 265 295 5.3E-6 T 11-10-2018 IPR001451 Hexapeptide repeat AL543_09450 8dd2fc1a16b7a41a0ee3dd3a43dd2d5b 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 314 347 5.1E-5 T 11-10-2018 IPR001451 Hexapeptide repeat AL543_09450 8dd2fc1a16b7a41a0ee3dd3a43dd2d5b 453 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 452 2.5E-209 T 11-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 AL543_09450 8dd2fc1a16b7a41a0ee3dd3a43dd2d5b 453 SUPERFAMILY SSF51161 252 434 1.87E-52 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AL543_09450 8dd2fc1a16b7a41a0ee3dd3a43dd2d5b 453 SUPERFAMILY SSF53448 1 249 5.22E-63 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL543_09450 8dd2fc1a16b7a41a0ee3dd3a43dd2d5b 453 Pfam PF12804 MobA-like NTP transferase domain 6 127 8.5E-22 T 11-10-2018 IPR025877 MobA-like NTP transferase AL543_09450 8dd2fc1a16b7a41a0ee3dd3a43dd2d5b 453 Gene3D G3DSA:2.160.10.10 225 453 7.4E-73 T 11-10-2018 AL543_09450 8dd2fc1a16b7a41a0ee3dd3a43dd2d5b 453 Gene3D G3DSA:3.90.550.10 1 224 5.0E-67 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL543_09450 8dd2fc1a16b7a41a0ee3dd3a43dd2d5b 453 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 449 42.787 T 11-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 AL543_16980 7ed109c984cca1e2d78dd3a1232fd975 283 Pfam PF01068 ATP dependent DNA ligase domain 117 201 4.9E-6 T 11-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 AL543_16980 7ed109c984cca1e2d78dd3a1232fd975 283 ProSitePatterns PS00333 ATP-dependent DNA ligase signature 2. 178 201 - T 11-10-2018 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 AL543_16980 7ed109c984cca1e2d78dd3a1232fd975 283 SUPERFAMILY SSF56091 30 201 6.0E-36 T 11-10-2018 AL543_16980 7ed109c984cca1e2d78dd3a1232fd975 283 Pfam PF14743 DNA ligase OB-like domain 216 280 2.6E-29 T 11-10-2018 IPR029319 DNA ligase, OB-like domain AL543_16980 7ed109c984cca1e2d78dd3a1232fd975 283 SUPERFAMILY SSF50249 175 280 1.03E-31 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL543_16980 7ed109c984cca1e2d78dd3a1232fd975 283 Gene3D G3DSA:2.40.50.140 201 282 1.9E-9 T 11-10-2018 AL543_16980 7ed109c984cca1e2d78dd3a1232fd975 283 Gene3D G3DSA:3.30.1490.70 34 193 3.5E-53 T 11-10-2018 AL543_16980 7ed109c984cca1e2d78dd3a1232fd975 283 Gene3D G3DSA:3.30.470.30 54 154 3.5E-53 T 11-10-2018 AL543_10850 b187c5873115624e176430261af29f29 395 TIGRFAM TIGR01933 hflK: HflK protein 87 347 3.5E-125 T 11-10-2018 IPR010201 HflK GO:0016021 AL543_10850 b187c5873115624e176430261af29f29 395 Gene3D G3DSA:3.30.479.30 115 247 8.6E-22 T 11-10-2018 AL543_10850 b187c5873115624e176430261af29f29 395 SMART SM00244 85 245 1.1E-50 T 11-10-2018 IPR001107 Band 7 domain AL543_10850 b187c5873115624e176430261af29f29 395 PRINTS PR00721 Stomatin signature 92 114 5.7E-7 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AL543_10850 b187c5873115624e176430261af29f29 395 PRINTS PR00721 Stomatin signature 139 160 5.7E-7 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AL543_10850 b187c5873115624e176430261af29f29 395 PRINTS PR00721 Stomatin signature 195 218 5.7E-7 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AL543_10850 b187c5873115624e176430261af29f29 395 Pfam PF01145 SPFH domain / Band 7 family 89 260 8.5E-30 T 11-10-2018 IPR001107 Band 7 domain AL543_10850 b187c5873115624e176430261af29f29 395 SUPERFAMILY SSF117892 118 250 3.79E-22 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily AL543_10850 b187c5873115624e176430261af29f29 395 Pfam PF12221 Bacterial membrane protein N terminal 1 56 1.8E-15 T 11-10-2018 IPR020980 Menbrane protein HflK, N-terminal AL543_09705 adc4daea086aaa09c6c172e6f97de5bf 88 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 2.6E-45 T 11-10-2018 IPR009383 Protein of unknown function DUF1040 AL543_09705 adc4daea086aaa09c6c172e6f97de5bf 88 Gene3D G3DSA:1.10.1580.20 1 88 5.3E-44 T 11-10-2018 IPR038134 YihD-like superfamily AL543_09705 adc4daea086aaa09c6c172e6f97de5bf 88 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 1.0E-37 T 11-10-2018 IPR009383 Protein of unknown function DUF1040 AL543_06255 38d1e20547561de05e528575c2ebfc5b 505 SMART SM00267 328 502 1.0E-51 T 11-10-2018 IPR000160 GGDEF domain AL543_06255 38d1e20547561de05e528575c2ebfc5b 505 SUPERFAMILY SSF55073 344 501 1.02E-37 T 11-10-2018 IPR029787 Nucleotide cyclase AL543_06255 38d1e20547561de05e528575c2ebfc5b 505 Gene3D G3DSA:3.30.70.270 325 503 2.5E-46 T 11-10-2018 AL543_06255 38d1e20547561de05e528575c2ebfc5b 505 Pfam PF00990 Diguanylate cyclase, GGDEF domain 340 498 2.0E-38 T 11-10-2018 IPR000160 GGDEF domain AL543_06255 38d1e20547561de05e528575c2ebfc5b 505 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 335 501 7.7E-40 T 11-10-2018 IPR000160 GGDEF domain AL543_06255 38d1e20547561de05e528575c2ebfc5b 505 Pfam PF05228 CHASE4 domain 60 211 2.0E-26 T 11-10-2018 IPR007892 CHASE4 AL543_18475 1a24f3d2a9b038bdc6379e953fc84ecc 221 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 38 204 1.1E-8 T 11-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 AL543_18160 30ecb70f9ffeed4c6a80be35217fae4d 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 38 2.3E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_18160 30ecb70f9ffeed4c6a80be35217fae4d 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 17 28 2.3E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_18160 30ecb70f9ffeed4c6a80be35217fae4d 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 49 2.3E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_18160 30ecb70f9ffeed4c6a80be35217fae4d 305 SUPERFAMILY SSF53850 90 298 1.9E-30 T 11-10-2018 AL543_18160 30ecb70f9ffeed4c6a80be35217fae4d 305 Gene3D G3DSA:3.40.190.290 90 303 1.9E-30 T 11-10-2018 AL543_18160 30ecb70f9ffeed4c6a80be35217fae4d 305 Gene3D G3DSA:1.10.10.10 3 88 5.6E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_18160 30ecb70f9ffeed4c6a80be35217fae4d 305 SUPERFAMILY SSF46785 4 108 3.64E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_18160 30ecb70f9ffeed4c6a80be35217fae4d 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 61 6.0E-14 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_18160 30ecb70f9ffeed4c6a80be35217fae4d 305 Pfam PF03466 LysR substrate binding domain 89 295 3.7E-29 T 11-10-2018 IPR005119 LysR, substrate-binding AL543_00375 96a759217d1f293ac57744ca0c91f1af 482 Gene3D G3DSA:1.20.5.320 435 482 2.5E-25 T 11-10-2018 AL543_00375 96a759217d1f293ac57744ca0c91f1af 482 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 4 469 3.7E-232 T 11-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AL543_00375 96a759217d1f293ac57744ca0c91f1af 482 PIRSF PIRSF000109 1 477 2.6E-240 T 11-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AL543_00375 96a759217d1f293ac57744ca0c91f1af 482 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 11-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AL543_00375 96a759217d1f293ac57744ca0c91f1af 482 Gene3D G3DSA:1.10.1040.10 181 434 4.6E-102 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL543_00375 96a759217d1f293ac57744ca0c91f1af 482 SMART SM01350 179 469 1.3E-211 T 11-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AL543_00375 96a759217d1f293ac57744ca0c91f1af 482 SUPERFAMILY SSF51735 4 174 1.38E-55 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_00375 96a759217d1f293ac57744ca0c91f1af 482 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 179 468 4.8E-126 T 11-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AL543_00375 96a759217d1f293ac57744ca0c91f1af 482 Gene3D G3DSA:3.40.50.720 1 180 6.6E-56 T 11-10-2018 AL543_00375 96a759217d1f293ac57744ca0c91f1af 482 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 169 2.4E-51 T 11-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 AL543_00375 96a759217d1f293ac57744ca0c91f1af 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 1.6E-84 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AL543_00375 96a759217d1f293ac57744ca0c91f1af 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 1.6E-84 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AL543_00375 96a759217d1f293ac57744ca0c91f1af 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 168 196 1.6E-84 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AL543_00375 96a759217d1f293ac57744ca0c91f1af 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 1.6E-84 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AL543_00375 96a759217d1f293ac57744ca0c91f1af 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 3 26 1.6E-84 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AL543_00375 96a759217d1f293ac57744ca0c91f1af 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 356 378 1.6E-84 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AL543_00375 96a759217d1f293ac57744ca0c91f1af 482 SUPERFAMILY SSF48179 177 472 3.33E-126 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AL543_01565 101416e6d48f12f456bb9ec4d7674e3a 469 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 323 335 - T 11-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal AL543_01565 101416e6d48f12f456bb9ec4d7674e3a 469 Gene3D G3DSA:1.25.40.80 133 284 8.0E-77 T 11-10-2018 AL543_01565 101416e6d48f12f456bb9ec4d7674e3a 469 Gene3D G3DSA:3.40.50.620 3 202 8.0E-77 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL543_01565 101416e6d48f12f456bb9ec4d7674e3a 469 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 343 362 - T 11-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal AL543_01565 101416e6d48f12f456bb9ec4d7674e3a 469 PRINTS PR00147 DNA photolyase signature 343 361 1.2E-29 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AL543_01565 101416e6d48f12f456bb9ec4d7674e3a 469 PRINTS PR00147 DNA photolyase signature 142 158 1.2E-29 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AL543_01565 101416e6d48f12f456bb9ec4d7674e3a 469 PRINTS PR00147 DNA photolyase signature 323 339 1.2E-29 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AL543_01565 101416e6d48f12f456bb9ec4d7674e3a 469 PRINTS PR00147 DNA photolyase signature 382 396 1.2E-29 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AL543_01565 101416e6d48f12f456bb9ec4d7674e3a 469 SUPERFAMILY SSF48173 191 468 3.4E-107 T 11-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 AL543_01565 101416e6d48f12f456bb9ec4d7674e3a 469 Pfam PF03441 FAD binding domain of DNA photolyase 273 465 6.6E-84 T 11-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 AL543_01565 101416e6d48f12f456bb9ec4d7674e3a 469 Gene3D G3DSA:1.10.579.10 291 469 1.6E-81 T 11-10-2018 AL543_01565 101416e6d48f12f456bb9ec4d7674e3a 469 SUPERFAMILY SSF52425 2 180 6.93E-52 T 11-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 AL543_01565 101416e6d48f12f456bb9ec4d7674e3a 469 Pfam PF00875 DNA photolyase 3 164 1.1E-48 T 11-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 AL543_07915 113dacc099f2f9f115b5a928ded5ce64 329 SUPERFAMILY SSF53474 22 299 1.61E-44 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL543_07915 113dacc099f2f9f115b5a928ded5ce64 329 PIRSF PIRSF005211 1 329 1.2E-107 T 11-10-2018 IPR012020 AB hydrolase 4 family AL543_07915 113dacc099f2f9f115b5a928ded5ce64 329 Pfam PF00561 alpha/beta hydrolase fold 61 301 1.1E-21 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AL543_12485 5a4488941cacda2a70c614392fa1389d 748 SMART SM00065 17 163 1.3E-21 T 11-10-2018 IPR003018 GAF domain GO:0005515 AL543_12485 5a4488941cacda2a70c614392fa1389d 748 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 171 721 1.8E-131 T 11-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 AL543_12485 5a4488941cacda2a70c614392fa1389d 748 Gene3D G3DSA:1.10.274.10 190 314 1.1E-57 T 11-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 AL543_12485 5a4488941cacda2a70c614392fa1389d 748 Gene3D G3DSA:3.20.20.60 400 739 1.7E-99 T 11-10-2018 AL543_12485 5a4488941cacda2a70c614392fa1389d 748 SUPERFAMILY SSF52009 293 413 2.09E-26 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 AL543_12485 5a4488941cacda2a70c614392fa1389d 748 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 612 630 - T 11-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AL543_12485 5a4488941cacda2a70c614392fa1389d 748 Pfam PF00391 PEP-utilising enzyme, mobile domain 319 391 2.2E-16 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AL543_12485 5a4488941cacda2a70c614392fa1389d 748 SUPERFAMILY SSF55781 2 158 2.18E-32 T 11-10-2018 AL543_12485 5a4488941cacda2a70c614392fa1389d 748 Gene3D G3DSA:3.30.450.40 1 162 2.6E-42 T 11-10-2018 IPR029016 GAF-like domain superfamily AL543_12485 5a4488941cacda2a70c614392fa1389d 748 Gene3D G3DSA:3.50.30.10 173 399 1.1E-57 T 11-10-2018 AL543_12485 5a4488941cacda2a70c614392fa1389d 748 SUPERFAMILY SSF47831 203 311 1.07E-26 T 11-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 AL543_12485 5a4488941cacda2a70c614392fa1389d 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 612 627 1.2E-22 T 11-10-2018 AL543_12485 5a4488941cacda2a70c614392fa1389d 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 629 644 1.2E-22 T 11-10-2018 AL543_12485 5a4488941cacda2a70c614392fa1389d 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 459 478 1.2E-22 T 11-10-2018 AL543_12485 5a4488941cacda2a70c614392fa1389d 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 665 677 1.2E-22 T 11-10-2018 AL543_12485 5a4488941cacda2a70c614392fa1389d 748 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 351 362 - T 11-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 AL543_12485 5a4488941cacda2a70c614392fa1389d 748 Pfam PF01590 GAF domain 20 151 3.1E-14 T 11-10-2018 IPR003018 GAF domain GO:0005515 AL543_12485 5a4488941cacda2a70c614392fa1389d 748 SUPERFAMILY SSF51621 419 714 1.1E-95 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AL543_12485 5a4488941cacda2a70c614392fa1389d 748 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 424 706 9.3E-92 T 11-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AL543_12485 5a4488941cacda2a70c614392fa1389d 748 Pfam PF05524 PEP-utilising enzyme, N-terminal 172 294 6.4E-23 T 11-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AL543_08260 e0ed20bccec2099615362e0ef0594b50 803 Gene3D G3DSA:1.20.120.1320 44 137 3.7E-75 T 11-10-2018 AL543_08260 e0ed20bccec2099615362e0ef0594b50 803 SUPERFAMILY SSF51735 448 623 3.1E-35 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_08260 e0ed20bccec2099615362e0ef0594b50 803 SUPERFAMILY SSF55347 601 784 3.07E-47 T 11-10-2018 AL543_08260 e0ed20bccec2099615362e0ef0594b50 803 Pfam PF00696 Amino acid kinase family 5 277 2.2E-43 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AL543_08260 e0ed20bccec2099615362e0ef0594b50 803 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 8 445 2.3E-67 T 11-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AL543_08260 e0ed20bccec2099615362e0ef0594b50 803 Pfam PF00742 Homoserine dehydrogenase 601 796 5.0E-44 T 11-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AL543_08260 e0ed20bccec2099615362e0ef0594b50 803 PIRSF PIRSF000727 5 803 2.1E-288 T 11-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AL543_08260 e0ed20bccec2099615362e0ef0594b50 803 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 457 593 3.5E-15 T 11-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 AL543_08260 e0ed20bccec2099615362e0ef0594b50 803 Gene3D G3DSA:3.40.1160.10 8 290 3.7E-75 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AL543_08260 e0ed20bccec2099615362e0ef0594b50 803 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 647 669 - T 11-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AL543_08260 e0ed20bccec2099615362e0ef0594b50 803 Gene3D G3DSA:3.40.50.720 451 797 2.9E-105 T 11-10-2018 AL543_08260 e0ed20bccec2099615362e0ef0594b50 803 Gene3D G3DSA:3.30.360.10 612 782 2.9E-105 T 11-10-2018 AL543_08260 e0ed20bccec2099615362e0ef0594b50 803 SUPERFAMILY SSF53633 5 291 2.49E-60 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AL543_08260 e0ed20bccec2099615362e0ef0594b50 803 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 11-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AL543_06545 e10046bc51866d1c46f471b886de22ab 328 Gene3D G3DSA:1.10.150.210 117 179 1.2E-188 T 11-10-2018 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 AL543_06545 e10046bc51866d1c46f471b886de22ab 328 SUPERFAMILY SSF56784 106 312 7.71E-48 T 11-10-2018 IPR036412 HAD-like superfamily AL543_06545 e10046bc51866d1c46f471b886de22ab 328 Gene3D G3DSA:3.40.50.1000 4 312 1.2E-188 T 11-10-2018 IPR023214 HAD superfamily AL543_06545 e10046bc51866d1c46f471b886de22ab 328 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 103 312 4.9E-85 T 11-10-2018 AL543_06545 e10046bc51866d1c46f471b886de22ab 328 Gene3D G3DSA:3.30.70.2020 10 324 1.2E-188 T 11-10-2018 AL543_06545 e10046bc51866d1c46f471b886de22ab 328 Pfam PF00702 haloacid dehalogenase-like hydrolase 109 281 3.0E-15 T 11-10-2018 AL543_06545 e10046bc51866d1c46f471b886de22ab 328 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 109 279 1.9E-25 T 11-10-2018 AL543_07160 7a0a914cf42a4f9e330020149a5ec4f3 550 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 370 392 9.3E-9 T 11-10-2018 AL543_07160 7a0a914cf42a4f9e330020149a5ec4f3 550 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 26 45 9.3E-9 T 11-10-2018 AL543_07160 7a0a914cf42a4f9e330020149a5ec4f3 550 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 22 535 4.9E-213 T 11-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 AL543_07160 7a0a914cf42a4f9e330020149a5ec4f3 550 SUPERFAMILY SSF51905 17 462 6.2E-77 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_07160 7a0a914cf42a4f9e330020149a5ec4f3 550 Pfam PF02910 Fumarate reductase flavoprotein C-term 456 537 1.0E-14 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL543_07160 7a0a914cf42a4f9e330020149a5ec4f3 550 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 25 47 2.8E-7 T 11-10-2018 AL543_07160 7a0a914cf42a4f9e330020149a5ec4f3 550 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 385 392 2.8E-7 T 11-10-2018 AL543_07160 7a0a914cf42a4f9e330020149a5ec4f3 550 SUPERFAMILY SSF56425 253 368 5.53E-42 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL543_07160 7a0a914cf42a4f9e330020149a5ec4f3 550 Gene3D G3DSA:3.50.50.60 25 418 1.4E-154 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_07160 7a0a914cf42a4f9e330020149a5ec4f3 550 PIRSF PIRSF000171 350 547 2.3E-11 T 11-10-2018 AL543_07160 7a0a914cf42a4f9e330020149a5ec4f3 550 PIRSF PIRSF000171 15 285 1.7E-27 T 11-10-2018 AL543_07160 7a0a914cf42a4f9e330020149a5ec4f3 550 Gene3D G3DSA:3.90.700.10 263 373 1.4E-154 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL543_07160 7a0a914cf42a4f9e330020149a5ec4f3 550 Gene3D G3DSA:1.20.58.100 440 550 4.5E-43 T 11-10-2018 AL543_07160 7a0a914cf42a4f9e330020149a5ec4f3 550 Pfam PF00890 FAD binding domain 25 407 5.4E-104 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL543_07160 7a0a914cf42a4f9e330020149a5ec4f3 550 SUPERFAMILY SSF46977 441 538 4.06E-31 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL543_13830 e75cc3616cad51dda88f2c95b4b79684 737 Pfam PF02706 Chain length determinant protein 12 101 5.5E-11 T 11-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 AL543_13830 e75cc3616cad51dda88f2c95b4b79684 737 Pfam PF13807 G-rich domain on putative tyrosine kinase 397 468 4.3E-10 T 11-10-2018 IPR032807 Tyrosine kinase, G-rich domain AL543_13830 e75cc3616cad51dda88f2c95b4b79684 737 SUPERFAMILY SSF52540 538 717 6.49E-37 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_13830 e75cc3616cad51dda88f2c95b4b79684 737 Gene3D G3DSA:3.40.50.300 462 732 1.8E-70 T 11-10-2018 AL543_13830 e75cc3616cad51dda88f2c95b4b79684 737 Pfam PF13614 AAA domain 548 684 5.3E-13 T 11-10-2018 IPR025669 AAA domain AL543_13830 e75cc3616cad51dda88f2c95b4b79684 737 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 520 723 3.7E-46 T 11-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 AL543_11110 1593b75ba57f0d01dd28aee3ea1e54ad 597 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 391 580 5.7E-63 T 11-10-2018 IPR021797 Virulence factor membrane-bound polymerase, C-terminal AL543_11110 1593b75ba57f0d01dd28aee3ea1e54ad 597 Pfam PF15864 Protein glycosylation ligase 177 202 1.6E-11 T 11-10-2018 IPR031726 Protein glycosylation ligase domain AL543_11110 1593b75ba57f0d01dd28aee3ea1e54ad 597 Pfam PF04932 O-Antigen ligase 224 370 4.3E-13 T 11-10-2018 IPR007016 O-antigen ligase-related AL543_13920 6c405134c2b2a11b4c71ec25ffa621f6 156 Pfam PF07295 Zinc-ribbon containing domain 14 153 1.5E-49 T 11-10-2018 IPR009912 Zinc-ribbon containing domain AL543_20110 1f1743b26afabe723bc9872776148877 145 Pfam PF09842 Predicted membrane protein (DUF2069) 18 120 1.3E-32 T 11-10-2018 IPR018643 Protein of unknown function DUF2069, membrane AL543_17145 8784ec671e4c80e406b93c67fcdd7e98 248 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_17145 8784ec671e4c80e406b93c67fcdd7e98 248 SMART SM00382 26 223 5.6E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_17145 8784ec671e4c80e406b93c67fcdd7e98 248 Pfam PF00005 ABC transporter 17 172 7.8E-21 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_17145 8784ec671e4c80e406b93c67fcdd7e98 248 SUPERFAMILY SSF52540 2 230 8.79E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_17145 8784ec671e4c80e406b93c67fcdd7e98 248 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 2 244 2.2E-109 T 11-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 AL543_17145 8784ec671e4c80e406b93c67fcdd7e98 248 Gene3D G3DSA:3.40.50.300 1 248 3.2E-65 T 11-10-2018 AL543_14145 d4a28474fc6cc3ab950eaeee98edfb40 504 SUPERFAMILY SSF53271 249 482 1.57E-69 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AL543_14145 d4a28474fc6cc3ab950eaeee98edfb40 504 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 463 2.1E-165 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AL543_14145 d4a28474fc6cc3ab950eaeee98edfb40 504 SUPERFAMILY SSF56235 2 256 1.8E-72 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL543_14145 d4a28474fc6cc3ab950eaeee98edfb40 504 Gene3D G3DSA:3.60.20.10 2 411 9.4E-158 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL543_14145 d4a28474fc6cc3ab950eaeee98edfb40 504 Pfam PF13522 Glutamine amidotransferase domain 64 207 1.1E-17 T 11-10-2018 AL543_14145 d4a28474fc6cc3ab950eaeee98edfb40 504 PIRSF PIRSF000485 1 480 6.3E-169 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AL543_14145 d4a28474fc6cc3ab950eaeee98edfb40 504 Gene3D G3DSA:3.40.50.2020 276 440 9.4E-158 T 11-10-2018 AL543_14145 d4a28474fc6cc3ab950eaeee98edfb40 504 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 463 44.754 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AL543_07905 03cfef7ca950042319b986dbf95a7b53 638 Gene3D G3DSA:3.40.50.300 276 540 2.1E-54 T 11-10-2018 AL543_07905 03cfef7ca950042319b986dbf95a7b53 638 Pfam PF09496 Cenp-O kinetochore centromere component 534 627 4.2E-4 T 11-10-2018 IPR018464 Centromere protein O GO:0000776|GO:0034508 Reactome: R-HSA-141444|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-5663220|Reactome: R-HSA-606279|Reactome: R-HSA-68877 AL543_07905 03cfef7ca950042319b986dbf95a7b53 638 SMART SM00382 26 223 2.6E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_07905 03cfef7ca950042319b986dbf95a7b53 638 SMART SM00382 337 503 4.7E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_07905 03cfef7ca950042319b986dbf95a7b53 638 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_07905 03cfef7ca950042319b986dbf95a7b53 638 Pfam PF00005 ABC transporter 328 459 4.9E-25 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_07905 03cfef7ca950042319b986dbf95a7b53 638 SUPERFAMILY SSF52540 277 494 2.79E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_07905 03cfef7ca950042319b986dbf95a7b53 638 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_07905 03cfef7ca950042319b986dbf95a7b53 638 Pfam PF00005 ABC transporter 17 178 4.7E-20 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_07905 03cfef7ca950042319b986dbf95a7b53 638 Pfam PF12848 ABC transporter 217 295 4.4E-28 T 11-10-2018 IPR032781 ABC-transporter extension domain AL543_07905 03cfef7ca950042319b986dbf95a7b53 638 Gene3D G3DSA:3.40.50.300 7 273 6.4E-59 T 11-10-2018 AL543_07905 03cfef7ca950042319b986dbf95a7b53 638 SUPERFAMILY SSF52540 2 255 1.75E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_09185 9885ad302446a39f48bc99be340009aa 175 Pfam PF00210 Ferritin-like domain 8 143 1.3E-39 T 11-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AL543_09185 9885ad302446a39f48bc99be340009aa 175 SUPERFAMILY SSF47240 1 159 9.15E-59 T 11-10-2018 IPR009078 Ferritin-like superfamily AL543_09185 9885ad302446a39f48bc99be340009aa 175 Gene3D G3DSA:1.20.1260.10 1 175 1.1E-53 T 11-10-2018 IPR012347 Ferritin-like AL543_10445 37bf9f7f730afdb7567305ac99c52d38 201 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 123 136 - T 11-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AL543_10445 37bf9f7f730afdb7567305ac99c52d38 201 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 3 200 1.1E-85 T 11-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AL543_10445 37bf9f7f730afdb7567305ac99c52d38 201 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 35 44 - T 11-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AL543_10445 37bf9f7f730afdb7567305ac99c52d38 201 Gene3D G3DSA:3.20.20.70 1 201 9.5E-75 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_10445 37bf9f7f730afdb7567305ac99c52d38 201 Pfam PF01081 KDPG and KHG aldolase 3 196 2.2E-74 T 11-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AL543_10445 37bf9f7f730afdb7567305ac99c52d38 201 SUPERFAMILY SSF51569 2 199 8.42E-66 T 11-10-2018 AL543_03740 dc6f2827faf934d04367e7a769c68fa3 519 Pfam PF05231 MASE1 7 285 1.2E-48 T 11-10-2018 IPR007895 MASE1 AL543_03740 dc6f2827faf934d04367e7a769c68fa3 519 SUPERFAMILY SSF55874 394 514 4.98E-17 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_03740 dc6f2827faf934d04367e7a769c68fa3 519 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 426 512 1.9E-5 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_03740 dc6f2827faf934d04367e7a769c68fa3 519 Pfam PF07730 Histidine kinase 320 383 1.0E-12 T 11-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AL543_03740 dc6f2827faf934d04367e7a769c68fa3 519 Gene3D G3DSA:3.30.565.10 386 513 2.1E-27 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_03740 dc6f2827faf934d04367e7a769c68fa3 519 SMART SM00387 423 515 7.5E-8 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_06370 6aca6f7ccf98af9dd73eb0aa759d728c 404 Gene3D G3DSA:3.40.640.10 36 296 9.3E-166 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL543_06370 6aca6f7ccf98af9dd73eb0aa759d728c 404 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 7 402 4.3E-170 T 11-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 AL543_06370 6aca6f7ccf98af9dd73eb0aa759d728c 404 PIRSF PIRSF005572 22 404 1.3E-56 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 AL543_06370 6aca6f7ccf98af9dd73eb0aa759d728c 404 Pfam PF00266 Aminotransferase class-V 25 393 1.2E-154 T 11-10-2018 IPR000192 Aminotransferase class V domain AL543_06370 6aca6f7ccf98af9dd73eb0aa759d728c 404 TIGRFAM TIGR03392 FeS_syn_CsdA: cysteine desulfurase, catalytic subunit CsdA 5 404 1.0E-156 T 11-10-2018 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GO:0016226|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 AL543_06370 6aca6f7ccf98af9dd73eb0aa759d728c 404 Gene3D G3DSA:3.90.1150.10 8 397 9.3E-166 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL543_06370 6aca6f7ccf98af9dd73eb0aa759d728c 404 SUPERFAMILY SSF53383 4 401 1.61E-126 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL543_09540 548f5684c144e7881b4e99931dfe4f51 541 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 350 1.5E-115 T 11-10-2018 IPR028053 Membrane insertase YidC, N-terminal AL543_09540 548f5684c144e7881b4e99931dfe4f51 541 PRINTS PR00701 60kDa inner membrane protein signature 162 182 2.2E-100 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AL543_09540 548f5684c144e7881b4e99931dfe4f51 541 PRINTS PR00701 60kDa inner membrane protein signature 72 93 2.2E-100 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AL543_09540 548f5684c144e7881b4e99931dfe4f51 541 PRINTS PR00701 60kDa inner membrane protein signature 2 23 2.2E-100 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AL543_09540 548f5684c144e7881b4e99931dfe4f51 541 PRINTS PR00701 60kDa inner membrane protein signature 413 436 2.2E-100 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AL543_09540 548f5684c144e7881b4e99931dfe4f51 541 PRINTS PR00701 60kDa inner membrane protein signature 250 265 2.2E-100 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AL543_09540 548f5684c144e7881b4e99931dfe4f51 541 PRINTS PR00701 60kDa inner membrane protein signature 497 520 2.2E-100 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AL543_09540 548f5684c144e7881b4e99931dfe4f51 541 PRINTS PR00701 60kDa inner membrane protein signature 215 233 2.2E-100 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AL543_09540 548f5684c144e7881b4e99931dfe4f51 541 PRINTS PR00701 60kDa inner membrane protein signature 322 342 2.2E-100 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AL543_09540 548f5684c144e7881b4e99931dfe4f51 541 PRINTS PR00701 60kDa inner membrane protein signature 460 482 2.2E-100 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AL543_09540 548f5684c144e7881b4e99931dfe4f51 541 Pfam PF02096 60Kd inner membrane protein 352 531 5.3E-64 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AL543_09540 548f5684c144e7881b4e99931dfe4f51 541 PRINTS PR01900 YidC translocation/secretion protein signature 466 481 2.0E-27 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AL543_09540 548f5684c144e7881b4e99931dfe4f51 541 PRINTS PR01900 YidC translocation/secretion protein signature 337 353 2.0E-27 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AL543_09540 548f5684c144e7881b4e99931dfe4f51 541 PRINTS PR01900 YidC translocation/secretion protein signature 486 510 2.0E-27 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AL543_09540 548f5684c144e7881b4e99931dfe4f51 541 Gene3D G3DSA:2.70.98.90 62 331 3.5E-89 T 11-10-2018 IPR038221 YidC, periplasmic domain superfamily AL543_09540 548f5684c144e7881b4e99931dfe4f51 541 Pfam PF14849 YidC periplasmic domain 66 341 1.2E-84 T 11-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain AL543_09540 548f5684c144e7881b4e99931dfe4f51 541 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 351 530 6.0E-74 T 11-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_09540 548f5684c144e7881b4e99931dfe4f51 541 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 533 26.301 T 11-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 AL543_07650 d1dcd40dfce5acf19ee5fe02a0907e6c 299 TIGRFAM TIGR03899 TIGR03899: TIGR03899 family protein 37 286 1.3E-109 T 11-10-2018 IPR021254 Protein of unknown function DUF2806 AL543_07650 d1dcd40dfce5acf19ee5fe02a0907e6c 299 Pfam PF10987 Protein of unknown function (DUF2806) 58 276 2.0E-85 T 11-10-2018 IPR021254 Protein of unknown function DUF2806 AL543_05355 3004dd6d4a68ece9e4c14dffd03dd0ba 119 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 112 5.7E-9 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL543_05355 3004dd6d4a68ece9e4c14dffd03dd0ba 119 Gene3D G3DSA:3.10.180.10 1 118 5.0E-20 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL543_05355 3004dd6d4a68ece9e4c14dffd03dd0ba 119 SUPERFAMILY SSF54593 6 117 2.15E-22 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL543_06515 eaab4c424844ab4a8ff89abb5f9e79cd 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 2.4E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_06515 eaab4c424844ab4a8ff89abb5f9e79cd 309 Gene3D G3DSA:3.40.190.10 163 259 1.0E-42 T 11-10-2018 AL543_06515 eaab4c424844ab4a8ff89abb5f9e79cd 309 SUPERFAMILY SSF46785 4 87 8.11E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_06515 eaab4c424844ab4a8ff89abb5f9e79cd 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.8E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_06515 eaab4c424844ab4a8ff89abb5f9e79cd 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.8E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_06515 eaab4c424844ab4a8ff89abb5f9e79cd 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.8E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_06515 eaab4c424844ab4a8ff89abb5f9e79cd 309 Gene3D G3DSA:1.10.10.10 7 95 4.4E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_06515 eaab4c424844ab4a8ff89abb5f9e79cd 309 SUPERFAMILY SSF53850 95 293 1.48E-29 T 11-10-2018 AL543_06515 eaab4c424844ab4a8ff89abb5f9e79cd 309 Gene3D G3DSA:3.40.190.10 103 286 1.0E-42 T 11-10-2018 AL543_06515 eaab4c424844ab4a8ff89abb5f9e79cd 309 Pfam PF03466 LysR substrate binding domain 93 289 8.4E-24 T 11-10-2018 IPR005119 LysR, substrate-binding AL543_09795 f0228e051347c5abe97c4358873290c0 278 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 117 195 6.0E-13 T 11-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AL543_09795 f0228e051347c5abe97c4358873290c0 278 Gene3D G3DSA:3.40.50.720 119 239 1.4E-85 T 11-10-2018 AL543_09795 f0228e051347c5abe97c4358873290c0 278 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 10 92 3.5E-22 T 11-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AL543_09795 f0228e051347c5abe97c4358873290c0 278 Gene3D G3DSA:3.40.50.10860 8 258 1.4E-85 T 11-10-2018 AL543_09795 f0228e051347c5abe97c4358873290c0 278 SUPERFAMILY SSF51735 106 273 2.77E-42 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_09795 f0228e051347c5abe97c4358873290c0 278 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 8 274 1.2E-85 T 11-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AL543_09795 f0228e051347c5abe97c4358873290c0 278 SUPERFAMILY SSF53223 6 105 3.34E-31 T 11-10-2018 AL543_09795 f0228e051347c5abe97c4358873290c0 278 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 5 273 31.0 T 11-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AL543_15530 c91d7b8313b0ddaf9752e8d651f85120 251 Gene3D G3DSA:3.40.50.300 3 250 1.7E-55 T 11-10-2018 AL543_15530 c91d7b8313b0ddaf9752e8d651f85120 251 Pfam PF00005 ABC transporter 16 164 6.9E-20 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_15530 c91d7b8313b0ddaf9752e8d651f85120 251 Hamap MF_01005 Vitamin B12 import ATP-binding protein BtuD [btuD]. 1 251 43.841 T 11-10-2018 IPR023693 ABC transporter, vitamin B12, BtuD GO:0005524|GO:0015889|GO:0016887 AL543_15530 c91d7b8313b0ddaf9752e8d651f85120 251 SMART SM00382 22 213 1.4E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_15530 c91d7b8313b0ddaf9752e8d651f85120 251 SUPERFAMILY SSF52540 16 230 1.33E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_02750 1e5c76a82b739f520691fe76482b0fb9 276 SUPERFAMILY SSF52402 2 276 1.53E-78 T 11-10-2018 AL543_02750 1e5c76a82b739f520691fe76482b0fb9 276 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 16 274 44.532 T 11-10-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 AL543_02750 1e5c76a82b739f520691fe76482b0fb9 276 TIGRFAM TIGR00552 nadE: NAD+ synthetase 20 272 5.5E-63 T 11-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 AL543_02750 1e5c76a82b739f520691fe76482b0fb9 276 Gene3D G3DSA:3.40.50.620 1 276 1.3E-81 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL543_02750 1e5c76a82b739f520691fe76482b0fb9 276 Pfam PF02540 NAD synthase 21 270 2.1E-61 T 11-10-2018 IPR022310 NAD/GMP synthase AL543_07940 8a666acb1ff31cda4d452ded5751fdc4 485 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 242 249 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AL543_07940 8a666acb1ff31cda4d452ded5751fdc4 485 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 3 484 4.8E-226 T 11-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 AL543_07940 8a666acb1ff31cda4d452ded5751fdc4 485 SUPERFAMILY SSF53720 2 449 6.68E-121 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AL543_07940 8a666acb1ff31cda4d452ded5751fdc4 485 Gene3D G3DSA:3.40.309.10 247 436 3.5E-137 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AL543_07940 8a666acb1ff31cda4d452ded5751fdc4 485 Pfam PF00171 Aldehyde dehydrogenase family 9 453 2.0E-116 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AL543_07940 8a666acb1ff31cda4d452ded5751fdc4 485 Gene3D G3DSA:3.40.605.10 7 448 3.5E-137 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AL543_07940 8a666acb1ff31cda4d452ded5751fdc4 485 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 1 485 55.726 T 11-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 AL543_07940 8a666acb1ff31cda4d452ded5751fdc4 485 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AL543_17880 8ce211856d71ed900645bebcfb374274 445 Gene3D G3DSA:1.10.225.40 358 445 1.3E-37 T 11-10-2018 IPR038198 MukF, C-terminal domain superfamily AL543_17880 8ce211856d71ed900645bebcfb374274 445 Pfam PF17192 MukF middle domain 126 286 2.8E-80 T 11-10-2018 IPR033440 Chromosome partition protein MukF, middle domain AL543_17880 8ce211856d71ed900645bebcfb374274 445 PIRSF PIRSF018282 1 445 2.8E-243 T 11-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 AL543_17880 8ce211856d71ed900645bebcfb374274 445 Gene3D G3DSA:1.20.58.590 124 316 9.7E-80 T 11-10-2018 IPR036141 MukF, middle domain superfamily AL543_17880 8ce211856d71ed900645bebcfb374274 445 Gene3D G3DSA:1.10.10.10 29 123 1.3E-47 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_17880 8ce211856d71ed900645bebcfb374274 445 Pfam PF03882 MukF winged-helix domain 10 122 1.3E-55 T 11-10-2018 IPR033439 Chromosome partition protein MukF, winged-helix domain AL543_17880 8ce211856d71ed900645bebcfb374274 445 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 6 445 53.635 T 11-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 AL543_17880 8ce211856d71ed900645bebcfb374274 445 Pfam PF17193 MukF C-terminal domain 288 445 4.4E-78 T 11-10-2018 IPR033441 Chromosome partition protein MukF, C-terminal domain AL543_17880 8ce211856d71ed900645bebcfb374274 445 SUPERFAMILY SSF46785 13 123 6.8E-46 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_17880 8ce211856d71ed900645bebcfb374274 445 SUPERFAMILY SSF140570 124 286 6.93E-79 T 11-10-2018 IPR036141 MukF, middle domain superfamily AL543_12635 8c27085d2d87988c7e716a4596a51f36 791 SMART SM00052 517 760 1.9E-74 T 11-10-2018 IPR001633 EAL domain AL543_12635 8c27085d2d87988c7e716a4596a51f36 791 Gene3D G3DSA:3.20.20.450 519 773 2.4E-74 T 11-10-2018 IPR035919 EAL domain superfamily AL543_12635 8c27085d2d87988c7e716a4596a51f36 791 SMART SM00267 328 507 3.2E-44 T 11-10-2018 IPR000160 GGDEF domain AL543_12635 8c27085d2d87988c7e716a4596a51f36 791 Gene3D G3DSA:3.30.70.270 337 518 1.7E-46 T 11-10-2018 AL543_12635 8c27085d2d87988c7e716a4596a51f36 791 Gene3D G3DSA:1.20.1480.50 241 336 5.2E-7 T 11-10-2018 AL543_12635 8c27085d2d87988c7e716a4596a51f36 791 Pfam PF00563 EAL domain 523 755 1.2E-62 T 11-10-2018 IPR001633 EAL domain AL543_12635 8c27085d2d87988c7e716a4596a51f36 791 Pfam PF00990 Diguanylate cyclase, GGDEF domain 340 503 1.0E-37 T 11-10-2018 IPR000160 GGDEF domain AL543_12635 8c27085d2d87988c7e716a4596a51f36 791 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 338 506 1.1E-32 T 11-10-2018 IPR000160 GGDEF domain AL543_12635 8c27085d2d87988c7e716a4596a51f36 791 SUPERFAMILY SSF55073 344 508 6.67E-38 T 11-10-2018 IPR029787 Nucleotide cyclase AL543_12635 8c27085d2d87988c7e716a4596a51f36 791 SUPERFAMILY SSF141868 522 769 5.49E-68 T 11-10-2018 IPR035919 EAL domain superfamily AL543_18435 82ae87e05e69276e9281daedb3ec6fb6 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 74 9.8E-17 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 AL543_18435 82ae87e05e69276e9281daedb3ec6fb6 246 SUPERFAMILY SSF161098 11 227 3.01E-40 T 11-10-2018 IPR035906 MetI-like superfamily AL543_18435 82ae87e05e69276e9281daedb3ec6fb6 246 Gene3D G3DSA:1.10.3720.10 3 243 4.4E-51 T 11-10-2018 IPR035906 MetI-like superfamily AL543_18435 82ae87e05e69276e9281daedb3ec6fb6 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 242 7.6E-23 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL543_08290 3ce6ab3fdeed0ab9f198020ec619cb5c 166 Pfam PF07813 LTXXQ motif family protein 39 144 2.0E-21 T 11-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 AL543_08290 3ce6ab3fdeed0ab9f198020ec619cb5c 166 PIRSF PIRSF034445 2 155 1.3E-16 T 11-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 AL543_08290 3ce6ab3fdeed0ab9f198020ec619cb5c 166 Gene3D G3DSA:1.20.120.1490 37 156 5.9E-28 T 11-10-2018 AL543_03980 423ae4431c31aeb99d28e993116c7e4d 317 SUPERFAMILY SSF52283 1 138 1.7E-20 T 11-10-2018 AL543_03980 423ae4431c31aeb99d28e993116c7e4d 317 Gene3D G3DSA:3.40.50.720 2 307 2.7E-119 T 11-10-2018 AL543_03980 423ae4431c31aeb99d28e993116c7e4d 317 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 21 312 3.0E-15 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 AL543_03980 423ae4431c31aeb99d28e993116c7e4d 317 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 289 3.4E-48 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AL543_03980 423ae4431c31aeb99d28e993116c7e4d 317 SUPERFAMILY SSF51735 106 289 4.57E-45 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_03980 423ae4431c31aeb99d28e993116c7e4d 317 Gene3D G3DSA:3.40.50.720 102 292 2.7E-119 T 11-10-2018 AL543_14130 4ab13f01990439d1e19ca600220ae7ee 421 PIRSF PIRSF001563 7 420 1.1E-108 T 11-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 AL543_14130 4ab13f01990439d1e19ca600220ae7ee 421 Pfam PF08245 Mur ligase middle domain 54 196 7.5E-8 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AL543_14130 4ab13f01990439d1e19ca600220ae7ee 421 SUPERFAMILY SSF53244 289 418 8.24E-33 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL543_14130 4ab13f01990439d1e19ca600220ae7ee 421 Gene3D G3DSA:3.90.190.20 289 420 2.4E-35 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL543_14130 4ab13f01990439d1e19ca600220ae7ee 421 Gene3D G3DSA:3.40.1190.10 1 288 1.3E-94 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL543_14130 4ab13f01990439d1e19ca600220ae7ee 421 TIGRFAM TIGR01499 folC: bifunctional protein FolC 32 415 9.4E-110 T 11-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 AL543_14130 4ab13f01990439d1e19ca600220ae7ee 421 Pfam PF02875 Mur ligase family, glutamate ligase domain 288 340 1.6E-8 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 AL543_14130 4ab13f01990439d1e19ca600220ae7ee 421 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 11-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 AL543_14130 4ab13f01990439d1e19ca600220ae7ee 421 SUPERFAMILY SSF53623 15 286 1.96E-87 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL543_04695 a409880a342ed6eecabb04b179fb7f78 326 SUPERFAMILY SSF53822 61 312 1.96E-38 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AL543_04695 a409880a342ed6eecabb04b179fb7f78 326 SMART SM00354 1 73 2.5E-25 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL543_04695 a409880a342ed6eecabb04b179fb7f78 326 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 63 257 2.2E-15 T 11-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain AL543_04695 a409880a342ed6eecabb04b179fb7f78 326 SUPERFAMILY SSF47413 1 58 4.61E-15 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL543_04695 a409880a342ed6eecabb04b179fb7f78 326 Pfam PF00356 Bacterial regulatory proteins, lacI family 2 50 1.6E-16 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL543_04695 a409880a342ed6eecabb04b179fb7f78 326 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 2 325 1.4E-134 T 11-10-2018 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 AL543_04695 a409880a342ed6eecabb04b179fb7f78 326 Gene3D G3DSA:3.40.50.2300 155 326 2.2E-26 T 11-10-2018 AL543_04695 a409880a342ed6eecabb04b179fb7f78 326 Gene3D G3DSA:3.40.50.2300 62 154 2.0E-19 T 11-10-2018 AL543_04695 a409880a342ed6eecabb04b179fb7f78 326 Gene3D G3DSA:1.10.260.40 1 61 2.2E-25 T 11-10-2018 AL543_04695 a409880a342ed6eecabb04b179fb7f78 326 ProSitePatterns PS00356 LacI-type HTH domain signature. 3 21 - T 11-10-2018 AL543_07895 3bb556fa6538e6db252cf8c4d4fc3278 600 Gene3D G3DSA:3.40.50.720 398 560 2.8E-38 T 11-10-2018 AL543_07895 3bb556fa6538e6db252cf8c4d4fc3278 600 PRINTS PR00335 TrkA potassium uptake protein signature 401 415 5.4E-7 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AL543_07895 3bb556fa6538e6db252cf8c4d4fc3278 600 PRINTS PR00335 TrkA potassium uptake protein signature 418 432 5.4E-7 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AL543_07895 3bb556fa6538e6db252cf8c4d4fc3278 600 PRINTS PR00335 TrkA potassium uptake protein signature 447 457 5.4E-7 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AL543_07895 3bb556fa6538e6db252cf8c4d4fc3278 600 PRINTS PR00335 TrkA potassium uptake protein signature 458 468 5.4E-7 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AL543_07895 3bb556fa6538e6db252cf8c4d4fc3278 600 SUPERFAMILY SSF51735 401 529 1.21E-32 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_07895 3bb556fa6538e6db252cf8c4d4fc3278 600 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 16 283 3.1E-81 T 11-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 AL543_07895 3bb556fa6538e6db252cf8c4d4fc3278 600 Gene3D G3DSA:1.20.1530.20 5 387 1.5E-84 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily AL543_07895 3bb556fa6538e6db252cf8c4d4fc3278 600 Hamap MF_01412 Glutathione-regulated potassium-efflux system protein KefB [kefB]. 4 598 46.733 T 11-10-2018 IPR020884 Glutathione-regulated potassium-efflux system protein KefB GO:0005886|GO:0006813|GO:0015503 AL543_07895 3bb556fa6538e6db252cf8c4d4fc3278 600 Pfam PF00999 Sodium/hydrogen exchanger family 14 372 3.6E-62 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AL543_07895 3bb556fa6538e6db252cf8c4d4fc3278 600 Pfam PF02254 TrkA-N domain 402 512 7.8E-25 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AL543_02995 cd0e64b7dd4ae990181d164070038ef3 1041 Gene3D G3DSA:1.20.1640.10 15 508 1.5E-271 T 11-10-2018 AL543_02995 cd0e64b7dd4ae990181d164070038ef3 1041 SUPERFAMILY SSF82866 798 1037 1.31E-51 T 11-10-2018 AL543_02995 cd0e64b7dd4ae990181d164070038ef3 1041 Gene3D G3DSA:3.30.70.1440 665 862 1.5E-271 T 11-10-2018 AL543_02995 cd0e64b7dd4ae990181d164070038ef3 1041 Gene3D G3DSA:3.30.70.1430 562 664 1.5E-271 T 11-10-2018 AL543_02995 cd0e64b7dd4ae990181d164070038ef3 1041 Gene3D G3DSA:3.30.70.1430 42 812 1.5E-271 T 11-10-2018 AL543_02995 cd0e64b7dd4ae990181d164070038ef3 1041 Gene3D G3DSA:1.20.1640.10 509 1030 1.5E-271 T 11-10-2018 AL543_02995 cd0e64b7dd4ae990181d164070038ef3 1041 SUPERFAMILY SSF82714 185 269 6.28E-17 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL543_02995 cd0e64b7dd4ae990181d164070038ef3 1041 SUPERFAMILY SSF82693 46 127 8.89E-20 T 11-10-2018 AL543_02995 cd0e64b7dd4ae990181d164070038ef3 1041 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 1.4E-31 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_02995 cd0e64b7dd4ae990181d164070038ef3 1041 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 1.4E-31 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_02995 cd0e64b7dd4ae990181d164070038ef3 1041 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 1.4E-31 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_02995 cd0e64b7dd4ae990181d164070038ef3 1041 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 1.4E-31 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_02995 cd0e64b7dd4ae990181d164070038ef3 1041 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 1.4E-31 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_02995 cd0e64b7dd4ae990181d164070038ef3 1041 PRINTS PR00702 Acriflavin resistance protein family signature 545 562 1.4E-31 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_02995 cd0e64b7dd4ae990181d164070038ef3 1041 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.4E-31 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_02995 cd0e64b7dd4ae990181d164070038ef3 1041 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1036 0.0 T 11-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 AL543_02995 cd0e64b7dd4ae990181d164070038ef3 1041 SUPERFAMILY SSF82866 294 498 9.16E-43 T 11-10-2018 AL543_02995 cd0e64b7dd4ae990181d164070038ef3 1041 SUPERFAMILY SSF82693 138 328 3.4E-23 T 11-10-2018 AL543_02995 cd0e64b7dd4ae990181d164070038ef3 1041 SUPERFAMILY SSF82714 716 800 3.27E-18 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL543_02995 cd0e64b7dd4ae990181d164070038ef3 1041 Gene3D G3DSA:3.30.70.1320 135 328 1.5E-271 T 11-10-2018 AL543_02995 cd0e64b7dd4ae990181d164070038ef3 1041 Gene3D G3DSA:3.30.2090.10 182 274 1.5E-271 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL543_02995 cd0e64b7dd4ae990181d164070038ef3 1041 Gene3D G3DSA:3.30.2090.10 716 804 1.5E-271 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL543_02995 cd0e64b7dd4ae990181d164070038ef3 1041 Pfam PF00873 AcrB/AcrD/AcrF family 8 1032 1.0E-243 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_16525 740c15000d8b5f7abf1db6b66c94330c 273 SMART SM00267 117 272 4.0E-23 T 11-10-2018 IPR000160 GGDEF domain AL543_16525 740c15000d8b5f7abf1db6b66c94330c 273 SUPERFAMILY SSF55073 133 260 4.24E-27 T 11-10-2018 IPR029787 Nucleotide cyclase AL543_16525 740c15000d8b5f7abf1db6b66c94330c 273 Gene3D G3DSA:3.30.70.270 115 263 5.6E-31 T 11-10-2018 AL543_16525 740c15000d8b5f7abf1db6b66c94330c 273 Pfam PF00990 Diguanylate cyclase, GGDEF domain 128 259 2.0E-22 T 11-10-2018 IPR000160 GGDEF domain AL543_16525 740c15000d8b5f7abf1db6b66c94330c 273 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 126 261 1.8E-21 T 11-10-2018 IPR000160 GGDEF domain AL543_01165 0c6ff7aaa3110e7b328092c1bb0634f5 556 Pfam PF03961 Flagellar Assembly Protein A 81 543 1.6E-122 T 11-10-2018 IPR005646 Flagellar assembly protein A AL543_01165 0c6ff7aaa3110e7b328092c1bb0634f5 556 SUPERFAMILY SSF63848 279 310 9.02E-6 T 11-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 AL543_16805 89d45e4d42f91eda2ee41d054706a623 353 SUPERFAMILY SSF51569 8 349 1.1E-129 T 11-10-2018 AL543_16805 89d45e4d42f91eda2ee41d054706a623 353 PIRSF PIRSF001361 1 353 8.1E-156 T 11-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AL543_16805 89d45e4d42f91eda2ee41d054706a623 353 Pfam PF00793 DAHP synthetase I family 44 338 1.0E-97 T 11-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AL543_16805 89d45e4d42f91eda2ee41d054706a623 353 Gene3D G3DSA:3.20.20.70 1 351 2.7E-152 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_16805 89d45e4d42f91eda2ee41d054706a623 353 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 350 1.8E-158 T 11-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AL543_00870 d82d2ea59bc3bba64702f6057502dab5 239 SUPERFAMILY SSF52540 3 232 4.56E-78 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_00870 d82d2ea59bc3bba64702f6057502dab5 239 PIRSF PIRSF039085 1 238 1.2E-100 T 11-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AL543_00870 d82d2ea59bc3bba64702f6057502dab5 239 SMART SM00382 28 210 1.3E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_00870 d82d2ea59bc3bba64702f6057502dab5 239 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_00870 d82d2ea59bc3bba64702f6057502dab5 239 Pfam PF00005 ABC transporter 19 162 1.2E-36 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_00870 d82d2ea59bc3bba64702f6057502dab5 239 Gene3D G3DSA:3.40.50.300 1 239 1.3E-79 T 11-10-2018 AL543_16085 c46ef3ba529c1af036915df87f7df35b 340 Gene3D G3DSA:3.90.850.10 1 338 5.0E-144 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AL543_16085 c46ef3ba529c1af036915df87f7df35b 340 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 80 332 1.1E-45 T 11-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 AL543_16085 c46ef3ba529c1af036915df87f7df35b 340 SUPERFAMILY SSF56529 76 334 2.75E-58 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AL543_14220 e110351401f16b72bcdb8d175e09eebb 676 Pfam PF12344 Ultra-violet resistance protein B 553 594 7.9E-21 T 11-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain AL543_14220 e110351401f16b72bcdb8d175e09eebb 676 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 669 0.0 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 AL543_14220 e110351401f16b72bcdb8d175e09eebb 676 SMART SM00487 9 426 3.7E-25 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL543_14220 e110351401f16b72bcdb8d175e09eebb 676 Pfam PF02151 UvrB/uvrC motif 636 671 5.6E-8 T 11-10-2018 IPR001943 UVR domain GO:0005515 AL543_14220 e110351401f16b72bcdb8d175e09eebb 676 Gene3D G3DSA:3.40.50.300 416 597 5.3E-48 T 11-10-2018 AL543_14220 e110351401f16b72bcdb8d175e09eebb 676 Pfam PF00271 Helicase conserved C-terminal domain 444 545 1.5E-16 T 11-10-2018 IPR001650 Helicase, C-terminal AL543_14220 e110351401f16b72bcdb8d175e09eebb 676 Gene3D G3DSA:3.40.50.300 1 232 1.1E-73 T 11-10-2018 AL543_14220 e110351401f16b72bcdb8d175e09eebb 676 SMART SM00490 461 547 8.7E-19 T 11-10-2018 IPR001650 Helicase, C-terminal AL543_14220 e110351401f16b72bcdb8d175e09eebb 676 Gene3D G3DSA:4.10.860.10 631 676 8.9E-21 T 11-10-2018 AL543_14220 e110351401f16b72bcdb8d175e09eebb 676 Gene3D G3DSA:3.40.50.300 268 415 5.6E-50 T 11-10-2018 AL543_14220 e110351401f16b72bcdb8d175e09eebb 676 SUPERFAMILY SSF52540 3 416 8.52E-137 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_14220 e110351401f16b72bcdb8d175e09eebb 676 SUPERFAMILY SSF46600 626 672 5.36E-11 T 11-10-2018 IPR036876 UVR domain superfamily AL543_14220 e110351401f16b72bcdb8d175e09eebb 676 Pfam PF04851 Type III restriction enzyme, res subunit 16 128 1.4E-8 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AL543_14220 e110351401f16b72bcdb8d175e09eebb 676 SUPERFAMILY SSF52540 37 586 2.18E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_14220 e110351401f16b72bcdb8d175e09eebb 676 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 671 42.951 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 AL543_11545 ad54f94dcd582e1e9293ed9d1464f23e 236 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 6 229 35.415 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 AL543_11545 ad54f94dcd582e1e9293ed9d1464f23e 236 SUPERFAMILY SSF51419 1 228 1.83E-81 T 11-10-2018 IPR029066 PLP-binding barrel AL543_11545 ad54f94dcd582e1e9293ed9d1464f23e 236 Pfam PF01168 Alanine racemase, N-terminal domain 8 230 6.5E-34 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL543_11545 ad54f94dcd582e1e9293ed9d1464f23e 236 PIRSF PIRSF004848 1 236 1.6E-77 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 AL543_11545 ad54f94dcd582e1e9293ed9d1464f23e 236 Gene3D G3DSA:3.20.20.10 1 235 3.7E-86 T 11-10-2018 IPR029066 PLP-binding barrel AL543_11545 ad54f94dcd582e1e9293ed9d1464f23e 236 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 80 94 - T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 AL543_11545 ad54f94dcd582e1e9293ed9d1464f23e 236 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 230 5.7E-86 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 AL543_08255 257b3c923c6d600c5a2c46c13880322a 388 Gene3D G3DSA:3.40.640.10 3 248 2.1E-80 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL543_08255 257b3c923c6d600c5a2c46c13880322a 388 SUPERFAMILY SSF53383 9 383 9.54E-113 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL543_08255 257b3c923c6d600c5a2c46c13880322a 388 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 382 3.8E-133 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL543_08255 257b3c923c6d600c5a2c46c13880322a 388 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 191 205 - T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL543_08255 257b3c923c6d600c5a2c46c13880322a 388 PIRSF PIRSF001434 1 384 6.9E-128 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL543_08255 257b3c923c6d600c5a2c46c13880322a 388 Gene3D G3DSA:3.90.1150.10 249 385 7.4E-51 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL543_08255 257b3c923c6d600c5a2c46c13880322a 388 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 4 383 1.5E-208 T 11-10-2018 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|MetaCyc: PWY-801 AL543_00560 fe7501560679facb183042e4672f4b83 467 Pfam PF13487 HD domain 129 186 1.7E-11 T 11-10-2018 AL543_00560 fe7501560679facb183042e4672f4b83 467 Pfam PF13487 HD domain 333 394 3.0E-17 T 11-10-2018 AL543_00560 fe7501560679facb183042e4672f4b83 467 SMART SM00471 278 413 6.4E-12 T 11-10-2018 IPR003607 HD/PDEase domain AL543_00560 fe7501560679facb183042e4672f4b83 467 Gene3D G3DSA:1.10.3210.10 261 451 1.4E-59 T 11-10-2018 AL543_00560 fe7501560679facb183042e4672f4b83 467 SUPERFAMILY SSF109604 15 229 1.95E-13 T 11-10-2018 AL543_00560 fe7501560679facb183042e4672f4b83 467 SUPERFAMILY SSF109604 269 440 1.01E-34 T 11-10-2018 AL543_00605 ed029e9dab84553a894681d38b53198c 521 Gene3D G3DSA:3.60.21.10 26 336 1.5E-79 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like AL543_00605 ed029e9dab84553a894681d38b53198c 521 PRINTS PR01607 Apyrase family signature 29 47 3.2E-19 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL543_00605 ed029e9dab84553a894681d38b53198c 521 PRINTS PR01607 Apyrase family signature 455 474 3.2E-19 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL543_00605 ed029e9dab84553a894681d38b53198c 521 PRINTS PR01607 Apyrase family signature 386 409 3.2E-19 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL543_00605 ed029e9dab84553a894681d38b53198c 521 PRINTS PR01607 Apyrase family signature 242 265 3.2E-19 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL543_00605 ed029e9dab84553a894681d38b53198c 521 PRINTS PR01607 Apyrase family signature 272 292 3.2E-19 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL543_00605 ed029e9dab84553a894681d38b53198c 521 SUPERFAMILY SSF55816 333 515 4.97E-49 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL543_00605 ed029e9dab84553a894681d38b53198c 521 SUPERFAMILY SSF56300 25 332 6.75E-66 T 11-10-2018 AL543_00605 ed029e9dab84553a894681d38b53198c 521 Pfam PF02872 5'-nucleotidase, C-terminal domain 342 481 5.8E-41 T 11-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL543_00605 ed029e9dab84553a894681d38b53198c 521 Pfam PF00149 Calcineurin-like phosphoesterase 32 257 1.6E-10 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AL543_00605 ed029e9dab84553a894681d38b53198c 521 Gene3D G3DSA:3.90.780.10 337 518 9.3E-50 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL543_19925 9ccc09c06044f50ce7ae7a30ab7a7b71 349 SUPERFAMILY SSF101801 248 323 1.96E-13 T 11-10-2018 IPR036429 SpoA-like superfamily AL543_19925 9ccc09c06044f50ce7ae7a30ab7a7b71 349 Pfam PF02154 Flagellar motor switch protein FliM 37 229 1.8E-81 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AL543_19925 9ccc09c06044f50ce7ae7a30ab7a7b71 349 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 319 2.6E-119 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AL543_19925 9ccc09c06044f50ce7ae7a30ab7a7b71 349 PIRSF PIRSF002888 1 328 1.3E-90 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AL543_19925 9ccc09c06044f50ce7ae7a30ab7a7b71 349 Gene3D G3DSA:3.40.1550.10 43 230 1.1E-55 T 11-10-2018 IPR028976 CheC-like superfamily AL543_19925 9ccc09c06044f50ce7ae7a30ab7a7b71 349 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 250 319 1.2E-16 T 11-10-2018 IPR001543 Surface presentation of antigen (SpoA) AL543_19925 9ccc09c06044f50ce7ae7a30ab7a7b71 349 PRINTS PR00955 Flagellar motor switch protein FliM signature 211 229 2.3E-18 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AL543_19925 9ccc09c06044f50ce7ae7a30ab7a7b71 349 PRINTS PR00955 Flagellar motor switch protein FliM signature 113 132 2.3E-18 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AL543_19925 9ccc09c06044f50ce7ae7a30ab7a7b71 349 PRINTS PR00955 Flagellar motor switch protein FliM signature 88 104 2.3E-18 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AL543_19925 9ccc09c06044f50ce7ae7a30ab7a7b71 349 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 2.3E-18 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AL543_19925 9ccc09c06044f50ce7ae7a30ab7a7b71 349 SUPERFAMILY SSF103039 4 230 3.92E-22 T 11-10-2018 IPR028976 CheC-like superfamily AL543_12175 17401c6a86652b591911c9edf7e591ba 637 SUPERFAMILY SSF51445 258 618 4.37E-127 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AL543_12175 17401c6a86652b591911c9edf7e591ba 637 Gene3D G3DSA:3.20.20.80 257 634 4.1E-134 T 11-10-2018 AL543_12175 17401c6a86652b591911c9edf7e591ba 637 SUPERFAMILY SSF55545 125 257 7.63E-24 T 11-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 AL543_12175 17401c6a86652b591911c9edf7e591ba 637 PRINTS PR00738 Glycosyl hydrolase family 20 signature 587 604 2.6E-50 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL543_12175 17401c6a86652b591911c9edf7e591ba 637 PRINTS PR00738 Glycosyl hydrolase family 20 signature 351 368 2.6E-50 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL543_12175 17401c6a86652b591911c9edf7e591ba 637 PRINTS PR00738 Glycosyl hydrolase family 20 signature 569 585 2.6E-50 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL543_12175 17401c6a86652b591911c9edf7e591ba 637 PRINTS PR00738 Glycosyl hydrolase family 20 signature 400 418 2.6E-50 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL543_12175 17401c6a86652b591911c9edf7e591ba 637 PRINTS PR00738 Glycosyl hydrolase family 20 signature 281 302 2.6E-50 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL543_12175 17401c6a86652b591911c9edf7e591ba 637 PRINTS PR00738 Glycosyl hydrolase family 20 signature 217 237 2.6E-50 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL543_12175 17401c6a86652b591911c9edf7e591ba 637 PRINTS PR00738 Glycosyl hydrolase family 20 signature 252 269 2.6E-50 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL543_12175 17401c6a86652b591911c9edf7e591ba 637 PRINTS PR00738 Glycosyl hydrolase family 20 signature 422 435 2.6E-50 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL543_12175 17401c6a86652b591911c9edf7e591ba 637 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 139 255 3.7E-19 T 11-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal AL543_12175 17401c6a86652b591911c9edf7e591ba 637 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 258 605 7.9E-117 T 11-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 AL543_12175 17401c6a86652b591911c9edf7e591ba 637 Gene3D G3DSA:3.30.379.10 130 256 1.2E-21 T 11-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 AL543_13735 db24f022756e0022216424370f7ddc45 372 Gene3D G3DSA:3.40.50.2000 3 369 2.4E-161 T 11-10-2018 AL543_13735 db24f022756e0022216424370f7ddc45 372 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 3 370 2.2E-162 T 11-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 AL543_13735 db24f022756e0022216424370f7ddc45 372 SUPERFAMILY SSF53756 2 371 3.99E-139 T 11-10-2018 AL543_13735 db24f022756e0022216424370f7ddc45 372 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 23 370 1.3E-123 T 11-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AL543_13735 db24f022756e0022216424370f7ddc45 372 Gene3D G3DSA:3.40.50.2000 188 357 2.4E-161 T 11-10-2018 AL543_18230 bea9b5a528a0aa6a890a54921c9ceb78 296 SUPERFAMILY SSF103481 196 282 1.44E-7 T 11-10-2018 AL543_18230 bea9b5a528a0aa6a890a54921c9ceb78 296 Pfam PF00892 EamA-like transporter family 141 280 2.4E-14 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL543_18230 bea9b5a528a0aa6a890a54921c9ceb78 296 Pfam PF00892 EamA-like transporter family 7 131 1.3E-8 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL543_18230 bea9b5a528a0aa6a890a54921c9ceb78 296 SUPERFAMILY SSF103481 42 132 2.35E-5 T 11-10-2018 AL543_17410 81fb646e147af6d39f1b8d1fe9a2a630 223 SMART SM00382 30 218 4.8E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_17410 81fb646e147af6d39f1b8d1fe9a2a630 223 Gene3D G3DSA:3.40.50.300 1 223 9.7E-59 T 11-10-2018 AL543_17410 81fb646e147af6d39f1b8d1fe9a2a630 223 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_17410 81fb646e147af6d39f1b8d1fe9a2a630 223 SUPERFAMILY SSF52540 1 218 4.56E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_17410 81fb646e147af6d39f1b8d1fe9a2a630 223 Pfam PF00005 ABC transporter 21 167 5.9E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_15650 b46f33c72c3b4af73f12105b26276227 299 Pfam PF12833 Helix-turn-helix domain 214 293 9.1E-23 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL543_15650 b46f33c72c3b4af73f12105b26276227 299 SMART SM00342 208 291 1.4E-23 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL543_15650 b46f33c72c3b4af73f12105b26276227 299 Gene3D G3DSA:1.10.10.60 189 240 3.1E-13 T 11-10-2018 AL543_15650 b46f33c72c3b4af73f12105b26276227 299 Gene3D G3DSA:1.10.10.60 241 298 1.4E-15 T 11-10-2018 AL543_15650 b46f33c72c3b4af73f12105b26276227 299 SUPERFAMILY SSF46689 191 242 4.38E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_15650 b46f33c72c3b4af73f12105b26276227 299 SUPERFAMILY SSF46689 245 295 6.72E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_04515 113952fbdef8e2239abb3e24a30b95b8 543 Gene3D G3DSA:3.40.50.300 1 339 5.4E-17 T 11-10-2018 AL543_04515 113952fbdef8e2239abb3e24a30b95b8 543 SUPERFAMILY SSF52540 1 326 9.02E-18 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_04515 113952fbdef8e2239abb3e24a30b95b8 543 Pfam PF11398 Protein of unknown function (DUF2813) 1 369 1.5E-150 T 11-10-2018 IPR022602 Protein of unknown function DUF2813 AL543_02845 956fa1de1ba568c374c6c75c6ea4d186 254 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_02845 956fa1de1ba568c374c6c75c6ea4d186 254 SUPERFAMILY SSF52540 2 226 6.81E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_02845 956fa1de1ba568c374c6c75c6ea4d186 254 Gene3D G3DSA:3.40.50.300 1 251 6.9E-65 T 11-10-2018 AL543_02845 956fa1de1ba568c374c6c75c6ea4d186 254 Pfam PF00005 ABC transporter 18 164 4.4E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_02845 956fa1de1ba568c374c6c75c6ea4d186 254 SMART SM00382 26 213 4.0E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_03250 5433081615b5672da7decfe3be11b577 288 Pfam PF02634 FdhD/NarQ family 42 276 5.3E-61 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AL543_03250 5433081615b5672da7decfe3be11b577 288 PIRSF PIRSF015626 12 280 7.1E-65 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AL543_03250 5433081615b5672da7decfe3be11b577 288 Gene3D G3DSA:3.40.140.10 132 282 1.3E-37 T 11-10-2018 AL543_03250 5433081615b5672da7decfe3be11b577 288 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 39 275 1.2E-43 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AL543_03250 5433081615b5672da7decfe3be11b577 288 SUPERFAMILY SSF53927 26 275 1.11E-64 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AL543_03250 5433081615b5672da7decfe3be11b577 288 Gene3D G3DSA:3.10.20.10 43 129 2.8E-8 T 11-10-2018 AL543_03250 5433081615b5672da7decfe3be11b577 288 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 18 279 26.882 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AL543_02105 ff5e173cf6ad161fb95839942f65e14b 158 Gene3D G3DSA:2.60.40.4150 24 155 2.0E-33 T 11-10-2018 IPR038706 Type VI secretion protein SciN-like superfamily AL543_02105 ff5e173cf6ad161fb95839942f65e14b 158 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 3 146 3.1E-45 T 11-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN AL543_02105 ff5e173cf6ad161fb95839942f65e14b 158 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 12 147 1.4E-38 T 11-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN AL543_12525 6c6a4b650beaa41462799be7d4f7eaf7 86 Pfam PF01649 Ribosomal protein S20 2 84 8.3E-28 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_12525 6c6a4b650beaa41462799be7d4f7eaf7 86 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 85 3.4E-31 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_12525 6c6a4b650beaa41462799be7d4f7eaf7 86 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 86 4.0E-36 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_12525 6c6a4b650beaa41462799be7d4f7eaf7 86 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.341 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_12525 6c6a4b650beaa41462799be7d4f7eaf7 86 SUPERFAMILY SSF46992 3 86 2.49E-32 T 11-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_12525 6c6a4b650beaa41462799be7d4f7eaf7 86 Gene3D G3DSA:1.20.58.110 1 86 1.3E-29 T 11-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_03005 12c4b8f6113f4a7ddcac37f42d5bc3c5 459 Gene3D G3DSA:1.20.1600.10 33 438 3.6E-44 T 11-10-2018 AL543_03005 12c4b8f6113f4a7ddcac37f42d5bc3c5 459 SUPERFAMILY SSF56954 3 438 6.41E-54 T 11-10-2018 AL543_03005 12c4b8f6113f4a7ddcac37f42d5bc3c5 459 Pfam PF02321 Outer membrane efflux protein 42 221 3.8E-9 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AL543_03005 12c4b8f6113f4a7ddcac37f42d5bc3c5 459 Pfam PF02321 Outer membrane efflux protein 259 436 2.3E-16 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AL543_08100 2c25952cc0da47473a59a4f87c660ab4 344 Gene3D G3DSA:3.40.50.720 6 199 2.8E-52 T 11-10-2018 AL543_08100 2c25952cc0da47473a59a4f87c660ab4 344 PIRSF PIRSF000114 10 344 1.1E-96 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AL543_08100 2c25952cc0da47473a59a4f87c660ab4 344 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 16 171 2.5E-46 T 11-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AL543_08100 2c25952cc0da47473a59a4f87c660ab4 344 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 14 334 37.319 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AL543_08100 2c25952cc0da47473a59a4f87c660ab4 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 68 95 1.7E-42 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AL543_08100 2c25952cc0da47473a59a4f87c660ab4 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 144 164 1.7E-42 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AL543_08100 2c25952cc0da47473a59a4f87c660ab4 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 185 209 1.7E-42 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AL543_08100 2c25952cc0da47473a59a4f87c660ab4 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 210 234 1.7E-42 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AL543_08100 2c25952cc0da47473a59a4f87c660ab4 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 18 35 1.7E-42 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AL543_08100 2c25952cc0da47473a59a4f87c660ab4 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 250 267 1.7E-42 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AL543_08100 2c25952cc0da47473a59a4f87c660ab4 344 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 200 221 - T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AL543_08100 2c25952cc0da47473a59a4f87c660ab4 344 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 192 329 1.2E-52 T 11-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AL543_08100 2c25952cc0da47473a59a4f87c660ab4 344 SUPERFAMILY SSF51735 15 190 2.89E-49 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_08100 2c25952cc0da47473a59a4f87c660ab4 344 SUPERFAMILY SSF48179 191 343 2.3E-56 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AL543_08100 2c25952cc0da47473a59a4f87c660ab4 344 Gene3D G3DSA:1.10.1040.10 201 344 2.6E-54 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL543_08335 590a1a422ee154636303b986ea5acf89 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 6.9E-20 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_08335 590a1a422ee154636303b986ea5acf89 209 SMART SM00448 5 119 7.1E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_08335 590a1a422ee154636303b986ea5acf89 209 Gene3D G3DSA:1.10.10.10 147 209 1.3E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_08335 590a1a422ee154636303b986ea5acf89 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_08335 590a1a422ee154636303b986ea5acf89 209 SUPERFAMILY SSF46894 140 206 7.48E-20 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL543_08335 590a1a422ee154636303b986ea5acf89 209 SUPERFAMILY SSF52172 4 130 4.41E-25 T 11-10-2018 IPR011006 CheY-like superfamily AL543_08335 590a1a422ee154636303b986ea5acf89 209 SMART SM00421 147 204 6.2E-23 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_08335 590a1a422ee154636303b986ea5acf89 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 3.6E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_08335 590a1a422ee154636303b986ea5acf89 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 3.6E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_08335 590a1a422ee154636303b986ea5acf89 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 3.6E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_08335 590a1a422ee154636303b986ea5acf89 209 Pfam PF00072 Response regulator receiver domain 7 120 4.1E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_08335 590a1a422ee154636303b986ea5acf89 209 Gene3D G3DSA:3.40.50.2300 3 132 7.5E-26 T 11-10-2018 AL543_12535 c2ad6758f9e6452156912893d8a2ae79 322 PIRSF PIRSF004491 1 313 1.8E-107 T 11-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 AL543_12535 c2ad6758f9e6452156912893d8a2ae79 322 Pfam PF01687 Riboflavin kinase 184 306 6.0E-38 T 11-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 AL543_12535 c2ad6758f9e6452156912893d8a2ae79 322 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 307 3.3E-106 T 11-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 AL543_12535 c2ad6758f9e6452156912893d8a2ae79 322 SUPERFAMILY SSF52374 15 175 3.56E-33 T 11-10-2018 AL543_12535 c2ad6758f9e6452156912893d8a2ae79 322 SMART SM00904 183 307 7.3E-64 T 11-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 AL543_12535 c2ad6758f9e6452156912893d8a2ae79 322 Gene3D G3DSA:3.40.50.620 1 185 2.1E-62 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL543_12535 c2ad6758f9e6452156912893d8a2ae79 322 Pfam PF06574 FAD synthetase 11 167 9.0E-60 T 11-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 AL543_12535 c2ad6758f9e6452156912893d8a2ae79 322 Gene3D G3DSA:2.40.30.30 186 320 1.7E-38 T 11-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 AL543_12535 c2ad6758f9e6452156912893d8a2ae79 322 SUPERFAMILY SSF82114 175 309 5.45E-44 T 11-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 AL543_19660 9eb307f7295457abff8f846b8a10417c 493 SMART SM00962 280 473 3.0E-64 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL543_19660 9eb307f7295457abff8f846b8a10417c 493 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 2 368 6.7E-86 T 11-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 AL543_19660 9eb307f7295457abff8f846b8a10417c 493 Pfam PF00448 SRP54-type protein, GTPase domain 282 470 1.8E-38 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL543_19660 9eb307f7295457abff8f846b8a10417c 493 SUPERFAMILY SSF52540 277 468 8.24E-34 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_19660 9eb307f7295457abff8f846b8a10417c 493 Gene3D G3DSA:3.40.50.300 275 461 4.5E-57 T 11-10-2018 AL543_19660 9eb307f7295457abff8f846b8a10417c 493 SMART SM00382 279 417 6.1E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_19660 9eb307f7295457abff8f846b8a10417c 493 Gene3D G3DSA:1.20.120.1380 265 464 4.5E-57 T 11-10-2018 AL543_04560 4082d695f29eaad214286c5d491d15a5 540 SUPERFAMILY SSF58104 231 540 8.76E-82 T 11-10-2018 AL543_04560 4082d695f29eaad214286c5d491d15a5 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 20 1.7E-21 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL543_04560 4082d695f29eaad214286c5d491d15a5 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 376 403 1.7E-21 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL543_04560 4082d695f29eaad214286c5d491d15a5 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 405 434 1.7E-21 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL543_04560 4082d695f29eaad214286c5d491d15a5 540 Pfam PF00672 HAMP domain 209 259 3.8E-11 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_04560 4082d695f29eaad214286c5d491d15a5 540 SMART SM00304 209 263 2.8E-14 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_04560 4082d695f29eaad214286c5d491d15a5 540 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 316 505 4.0E-43 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_04560 4082d695f29eaad214286c5d491d15a5 540 SMART SM00283 278 539 3.0E-84 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_04560 4082d695f29eaad214286c5d491d15a5 540 Gene3D G3DSA:1.10.287.950 209 540 2.5E-76 T 11-10-2018 AL543_09745 c74c93b44c75da23477b6012846cd6c3 315 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 315 36.887 T 11-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 AL543_09745 c74c93b44c75da23477b6012846cd6c3 315 SUPERFAMILY SSF50486 208 310 3.3E-31 T 11-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 AL543_09745 c74c93b44c75da23477b6012846cd6c3 315 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 312 4.0E-108 T 11-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 AL543_09745 c74c93b44c75da23477b6012846cd6c3 315 Pfam PF02911 Formyl transferase, C-terminal domain 207 303 4.4E-27 T 11-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL543_09745 c74c93b44c75da23477b6012846cd6c3 315 Gene3D G3DSA:3.10.25.10 210 314 2.1E-37 T 11-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL543_09745 c74c93b44c75da23477b6012846cd6c3 315 Pfam PF00551 Formyl transferase 6 183 4.4E-48 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL543_09745 c74c93b44c75da23477b6012846cd6c3 315 SUPERFAMILY SSF53328 5 210 4.97E-68 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL543_09745 c74c93b44c75da23477b6012846cd6c3 315 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 11-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL543_09745 c74c93b44c75da23477b6012846cd6c3 315 Gene3D G3DSA:3.40.50.170 1 209 2.9E-89 T 11-10-2018 AL543_19275 85e57ceed9e46a8832b5c827da8c2195 272 Gene3D G3DSA:3.40.50.150 1 272 6.0E-78 T 11-10-2018 AL543_19275 85e57ceed9e46a8832b5c827da8c2195 272 Pfam PF13649 Methyltransferase domain 90 161 1.8E-11 T 11-10-2018 AL543_19275 85e57ceed9e46a8832b5c827da8c2195 272 PIRSF PIRSF018249 1 272 1.9E-83 T 11-10-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 AL543_19275 85e57ceed9e46a8832b5c827da8c2195 272 SUPERFAMILY SSF53335 5 250 1.2E-44 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL543_06970 7bb643f967eef7f688dd82f3c309b702 208 Gene3D G3DSA:3.90.79.10 1 208 8.2E-64 T 11-10-2018 AL543_06970 7bb643f967eef7f688dd82f3c309b702 208 ProSitePatterns PS00893 Nudix box signature. 96 117 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AL543_06970 7bb643f967eef7f688dd82f3c309b702 208 SUPERFAMILY SSF55811 3 206 1.26E-44 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AL543_06970 7bb643f967eef7f688dd82f3c309b702 208 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 15 198 1.4E-59 T 11-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 AL543_06970 7bb643f967eef7f688dd82f3c309b702 208 Pfam PF00293 NUDIX domain 59 175 9.9E-8 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL543_15710 fa24494027d7d64b0952fb7adcab3653 238 Pfam PF11201 Protein of unknown function (DUF2982) 81 230 1.5E-61 T 11-10-2018 IPR021367 Protein of unknown function DUF2982 AL543_08720 a077a776fb2dc16f6b62947b56f5f7ef 145 Pfam PF10980 Protein of unknown function (DUF2787) 16 141 7.3E-41 T 11-10-2018 IPR021248 Protein of unknown function DUF2787 AL543_08720 a077a776fb2dc16f6b62947b56f5f7ef 145 Gene3D G3DSA:3.10.450.430 1 143 1.3E-48 T 11-10-2018 AL543_10020 93101ea21bea1570816edf4afbb4a5ca 402 Pfam PF01609 Transposase DDE domain 90 325 2.4E-24 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AL543_10020 93101ea21bea1570816edf4afbb4a5ca 402 SUPERFAMILY SSF53098 1 381 1.59E-66 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_19305 977db9617961a4e86b29bcf67525a998 314 PIRSF PIRSF002867 1 312 2.0E-106 T 11-10-2018 IPR024181 Chemotaxis response regulator CheV AL543_19305 977db9617961a4e86b29bcf67525a998 314 SMART SM00260 17 158 3.4E-28 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AL543_19305 977db9617961a4e86b29bcf67525a998 314 SUPERFAMILY SSF52172 179 310 1.71E-22 T 11-10-2018 IPR011006 CheY-like superfamily AL543_19305 977db9617961a4e86b29bcf67525a998 314 Pfam PF01584 CheW-like domain 21 160 3.3E-36 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AL543_19305 977db9617961a4e86b29bcf67525a998 314 Gene3D G3DSA:2.30.30.40 24 152 2.1E-28 T 11-10-2018 AL543_19305 977db9617961a4e86b29bcf67525a998 314 Gene3D G3DSA:3.40.50.2300 181 311 7.8E-22 T 11-10-2018 AL543_19305 977db9617961a4e86b29bcf67525a998 314 SMART SM00448 184 305 1.1E-10 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_19305 977db9617961a4e86b29bcf67525a998 314 Pfam PF00072 Response regulator receiver domain 186 303 9.8E-15 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_19305 977db9617961a4e86b29bcf67525a998 314 Gene3D G3DSA:2.40.50.180 39 158 2.1E-28 T 11-10-2018 AL543_19305 977db9617961a4e86b29bcf67525a998 314 SUPERFAMILY SSF50341 16 163 4.45E-34 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AL543_10140 f3e8953bd57f797abcadc39ede16b6d0 288 Pfam PF03755 YicC-like family, N-terminal region 2 154 1.0E-41 T 11-10-2018 IPR013527 YicC-like, N-terminal AL543_10140 f3e8953bd57f797abcadc39ede16b6d0 288 Pfam PF08340 Domain of unknown function (DUF1732) 204 288 5.7E-35 T 11-10-2018 IPR013551 Domain of unknown function DUF1732 AL543_10140 f3e8953bd57f797abcadc39ede16b6d0 288 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 288 2.9E-117 T 11-10-2018 IPR005229 Conserved hypothetical protein CHP00255 AL543_18575 008204b265fe4faebeb3615625b68e0d 1156 SMART SM00490 828 912 4.1E-19 T 11-10-2018 IPR001650 Helicase, C-terminal AL543_18575 008204b265fe4faebeb3615625b68e0d 1156 Gene3D G3DSA:2.30.30.840 485 543 7.1E-236 T 11-10-2018 AL543_18575 008204b265fe4faebeb3615625b68e0d 1156 Gene3D G3DSA:3.30.2060.10 130 215 3.2E-120 T 11-10-2018 AL543_18575 008204b265fe4faebeb3615625b68e0d 1156 SUPERFAMILY SSF52540 784 992 1.01E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_18575 008204b265fe4faebeb3615625b68e0d 1156 Gene3D G3DSA:3.40.50.11180 26 333 3.2E-120 T 11-10-2018 AL543_18575 008204b265fe4faebeb3615625b68e0d 1156 SMART SM01058 481 578 1.0E-49 T 11-10-2018 IPR003711 CarD-like/TRCF domain AL543_18575 008204b265fe4faebeb3615625b68e0d 1156 Pfam PF03461 TRCF domain 1012 1102 6.8E-28 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 AL543_18575 008204b265fe4faebeb3615625b68e0d 1156 Gene3D G3DSA:3.90.1150.50 1006 1153 8.8E-46 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain AL543_18575 008204b265fe4faebeb3615625b68e0d 1156 SMART SM00487 602 792 3.3E-33 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL543_18575 008204b265fe4faebeb3615625b68e0d 1156 Pfam PF00271 Helicase conserved C-terminal domain 809 911 3.3E-16 T 11-10-2018 IPR001650 Helicase, C-terminal AL543_18575 008204b265fe4faebeb3615625b68e0d 1156 SUPERFAMILY SSF143517 1000 1149 6.02E-43 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain AL543_18575 008204b265fe4faebeb3615625b68e0d 1156 SUPERFAMILY SSF52540 351 466 8.5E-28 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_18575 008204b265fe4faebeb3615625b68e0d 1156 Gene3D G3DSA:3.40.50.300 544 783 7.1E-236 T 11-10-2018 AL543_18575 008204b265fe4faebeb3615625b68e0d 1156 Pfam PF00270 DEAD/DEAH box helicase 607 767 3.9E-20 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL543_18575 008204b265fe4faebeb3615625b68e0d 1156 Gene3D G3DSA:3.40.50.300 480 992 7.1E-236 T 11-10-2018 AL543_18575 008204b265fe4faebeb3615625b68e0d 1156 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 37 1114 28.017 T 11-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 AL543_18575 008204b265fe4faebeb3615625b68e0d 1156 Pfam PF02559 CarD-like/TRCF domain 482 577 2.7E-25 T 11-10-2018 IPR003711 CarD-like/TRCF domain AL543_18575 008204b265fe4faebeb3615625b68e0d 1156 SUPERFAMILY SSF52540 525 785 6.0E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_18575 008204b265fe4faebeb3615625b68e0d 1156 Gene3D G3DSA:3.40.50.11140 355 453 2.7E-36 T 11-10-2018 AL543_18575 008204b265fe4faebeb3615625b68e0d 1156 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 148 1084 0.0 T 11-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 AL543_18575 008204b265fe4faebeb3615625b68e0d 1156 SUPERFAMILY SSF52540 15 345 8.76E-99 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_18575 008204b265fe4faebeb3615625b68e0d 1156 SMART SM00982 1010 1110 7.8E-47 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 AL543_18575 008204b265fe4faebeb3615625b68e0d 1156 SUPERFAMILY SSF141259 472 550 1.31E-24 T 11-10-2018 IPR036101 CarD-like/TRCF domain superfamily AL543_05845 01be49a012ae78305a2e75c20cb7bad8 128 Hamap MF_01255 L-ectoine synthase [ectC]. 1 127 38.011 T 11-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 AL543_05845 01be49a012ae78305a2e75c20cb7bad8 128 ProDom PD080544 SYNTHASE 4.2.1.- LYASE L-ECTOINE DEHYDRATASE N-ACETYLDIAMINOBUTYRATE ECTOINE ENZYME SYNTHASE:ECTOINE ECTC 1 117 4.0E-60 T 11-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 AL543_05845 01be49a012ae78305a2e75c20cb7bad8 128 Gene3D G3DSA:2.60.120.10 1 115 2.9E-43 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL543_05845 01be49a012ae78305a2e75c20cb7bad8 128 Pfam PF06339 Ectoine synthase 1 126 1.7E-58 T 11-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 AL543_05845 01be49a012ae78305a2e75c20cb7bad8 128 SUPERFAMILY SSF51182 9 127 4.18E-21 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AL543_09265 0baf204fe29a60e0283b08bf8a5b958e 418 SUPERFAMILY SSF51391 190 390 3.01E-58 T 11-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL543_09265 0baf204fe29a60e0283b08bf8a5b958e 418 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 181 394 18.815 T 11-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL543_09265 0baf204fe29a60e0283b08bf8a5b958e 418 Gene3D G3DSA:3.20.20.70 181 397 1.4E-54 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_09265 0baf204fe29a60e0283b08bf8a5b958e 418 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 201 389 2.8E-46 T 11-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL543_09265 0baf204fe29a60e0283b08bf8a5b958e 418 Pfam PF02581 Thiamine monophosphate synthase 199 376 3.9E-52 T 11-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL543_13025 7659204f8419448c35458e2f56acb12d 386 SMART SM00564 243 274 9.1 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AL543_13025 7659204f8419448c35458e2f56acb12d 386 SMART SM00564 321 353 140.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AL543_13025 7659204f8419448c35458e2f56acb12d 386 SMART SM00564 63 94 5.0E-5 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AL543_13025 7659204f8419448c35458e2f56acb12d 386 SMART SM00564 280 312 25.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AL543_13025 7659204f8419448c35458e2f56acb12d 386 SMART SM00564 192 223 510.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AL543_13025 7659204f8419448c35458e2f56acb12d 386 SMART SM00564 147 178 3.1 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AL543_13025 7659204f8419448c35458e2f56acb12d 386 SMART SM00564 106 138 21.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AL543_13025 7659204f8419448c35458e2f56acb12d 386 SUPERFAMILY SSF50998 36 376 1.49E-79 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AL543_13025 7659204f8419448c35458e2f56acb12d 386 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 7 382 4.3E-137 T 11-10-2018 IPR017687 Outer membrane protein assembly factor BamB AL543_13025 7659204f8419448c35458e2f56acb12d 386 Pfam PF13360 PQQ-like domain 76 311 7.5E-53 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AL543_13025 7659204f8419448c35458e2f56acb12d 386 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 3 384 41.395 T 11-10-2018 IPR017687 Outer membrane protein assembly factor BamB AL543_13025 7659204f8419448c35458e2f56acb12d 386 Gene3D G3DSA:2.130.10.10 18 385 2.8E-96 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AL543_00590 fa8dc53a9e86ed54ef70395b17a6e185 308 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 142 301 4.5E-41 T 11-10-2018 IPR000160 GGDEF domain AL543_00590 fa8dc53a9e86ed54ef70395b17a6e185 308 SMART SM00267 133 303 8.8E-51 T 11-10-2018 IPR000160 GGDEF domain AL543_00590 fa8dc53a9e86ed54ef70395b17a6e185 308 Pfam PF00990 Diguanylate cyclase, GGDEF domain 144 299 1.4E-39 T 11-10-2018 IPR000160 GGDEF domain AL543_00590 fa8dc53a9e86ed54ef70395b17a6e185 308 Gene3D G3DSA:3.30.450.20 13 140 2.4E-16 T 11-10-2018 AL543_00590 fa8dc53a9e86ed54ef70395b17a6e185 308 SUPERFAMILY SSF55785 23 134 2.97E-14 T 11-10-2018 IPR035965 PAS domain superfamily AL543_00590 fa8dc53a9e86ed54ef70395b17a6e185 308 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 20 140 2.8E-6 T 11-10-2018 IPR000014 PAS domain AL543_00590 fa8dc53a9e86ed54ef70395b17a6e185 308 Pfam PF08448 PAS fold 23 132 2.0E-15 T 11-10-2018 IPR013656 PAS fold-4 AL543_00590 fa8dc53a9e86ed54ef70395b17a6e185 308 Gene3D G3DSA:3.30.70.270 141 306 1.7E-49 T 11-10-2018 AL543_00590 fa8dc53a9e86ed54ef70395b17a6e185 308 SUPERFAMILY SSF55073 149 305 9.42E-44 T 11-10-2018 IPR029787 Nucleotide cyclase AL543_16480 4ab8f26501c02711c6914edf73eb1831 172 Pfam PF05638 Type VI secretion system effector, Hcp 6 155 1.9E-34 T 11-10-2018 IPR008514 Type VI secretion system effector, Hcp AL543_16480 4ab8f26501c02711c6914edf73eb1831 172 SUPERFAMILY SSF141452 3 168 1.57E-40 T 11-10-2018 IPR036624 Hcp1-like superfamily AL543_16480 4ab8f26501c02711c6914edf73eb1831 172 Gene3D G3DSA:2.30.110.20 2 172 2.7E-68 T 11-10-2018 IPR036624 Hcp1-like superfamily AL543_16480 4ab8f26501c02711c6914edf73eb1831 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 8.6E-65 T 11-10-2018 IPR008514 Type VI secretion system effector, Hcp AL543_01380 4ab8f26501c02711c6914edf73eb1831 172 Pfam PF05638 Type VI secretion system effector, Hcp 6 155 1.9E-34 T 11-10-2018 IPR008514 Type VI secretion system effector, Hcp AL543_01380 4ab8f26501c02711c6914edf73eb1831 172 SUPERFAMILY SSF141452 3 168 1.57E-40 T 11-10-2018 IPR036624 Hcp1-like superfamily AL543_01380 4ab8f26501c02711c6914edf73eb1831 172 Gene3D G3DSA:2.30.110.20 2 172 2.7E-68 T 11-10-2018 IPR036624 Hcp1-like superfamily AL543_01380 4ab8f26501c02711c6914edf73eb1831 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 8.6E-65 T 11-10-2018 IPR008514 Type VI secretion system effector, Hcp AL543_08350 654f04979a99250b4c0058dc9b69e3ef 567 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 8 558 2.9E-263 T 11-10-2018 IPR019899 Sodium/solute symporter, VC2705 subfamily AL543_08350 654f04979a99250b4c0058dc9b69e3ef 567 Gene3D G3DSA:1.20.1730.10 5 328 5.0E-35 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily AL543_08350 654f04979a99250b4c0058dc9b69e3ef 567 Gene3D G3DSA:1.20.1730.10 347 556 9.1E-26 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily AL543_08350 654f04979a99250b4c0058dc9b69e3ef 567 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 471 491 - T 11-10-2018 IPR018212 Sodium/solute symporter, conserved site AL543_08350 654f04979a99250b4c0058dc9b69e3ef 567 Pfam PF00474 Sodium:solute symporter family 33 299 8.9E-33 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AL543_08350 654f04979a99250b4c0058dc9b69e3ef 567 Pfam PF00474 Sodium:solute symporter family 373 489 3.6E-18 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AL543_02385 def7f95980448ed41e6c63b5dd68d7cd 318 Gene3D G3DSA:3.40.50.410 82 284 5.7E-58 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AL543_02385 def7f95980448ed41e6c63b5dd68d7cd 318 SMART SM00327 83 284 1.2E-20 T 11-10-2018 IPR002035 von Willebrand factor, type A AL543_02385 def7f95980448ed41e6c63b5dd68d7cd 318 Pfam PF00092 von Willebrand factor type A domain 85 277 2.3E-35 T 11-10-2018 IPR002035 von Willebrand factor, type A AL543_02385 def7f95980448ed41e6c63b5dd68d7cd 318 SUPERFAMILY SSF53300 82 280 5.64E-37 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AL543_05825 e4203c68aed880c8a1c25fcb4e308b71 407 Gene3D G3DSA:1.10.287.470 100 168 9.6E-13 T 11-10-2018 AL543_05825 e4203c68aed880c8a1c25fcb4e308b71 407 SUPERFAMILY SSF111369 193 276 1.06E-5 T 11-10-2018 AL543_05825 e4203c68aed880c8a1c25fcb4e308b71 407 Gene3D G3DSA:2.40.50.100 70 99 9.6E-13 T 11-10-2018 AL543_05825 e4203c68aed880c8a1c25fcb4e308b71 407 Pfam PF13533 Biotin-lipoyl like 70 110 3.0E-9 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AL543_05825 e4203c68aed880c8a1c25fcb4e308b71 407 Gene3D G3DSA:1.10.287.470 181 248 2.0E-13 T 11-10-2018 AL543_05825 e4203c68aed880c8a1c25fcb4e308b71 407 Gene3D G3DSA:2.40.50.100 177 281 2.0E-13 T 11-10-2018 AL543_05825 e4203c68aed880c8a1c25fcb4e308b71 407 SUPERFAMILY SSF111369 71 136 1.44E-6 T 11-10-2018 AL543_05825 e4203c68aed880c8a1c25fcb4e308b71 407 Gene3D G3DSA:2.40.30.170 282 338 2.0E-13 T 11-10-2018 AL543_08475 ff2e2c223a73d2a0db36618fc36d4b99 336 SUPERFAMILY SSF158544 101 213 8.63E-28 T 11-10-2018 IPR038072 GspK, central domain superfamily AL543_08475 ff2e2c223a73d2a0db36618fc36d4b99 336 Gene3D G3DSA:1.10.40.60 216 285 4.3E-90 T 11-10-2018 IPR038072 GspK, central domain superfamily AL543_08475 ff2e2c223a73d2a0db36618fc36d4b99 336 Pfam PF03934 Type II secretion system (T2SS), protein K 30 317 6.9E-87 T 11-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 AL543_08475 ff2e2c223a73d2a0db36618fc36d4b99 336 PIRSF PIRSF002786 1 328 1.0E-62 T 11-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 AL543_08475 ff2e2c223a73d2a0db36618fc36d4b99 336 Gene3D G3DSA:3.30.1300.30 42 309 4.3E-90 T 11-10-2018 AL543_08475 ff2e2c223a73d2a0db36618fc36d4b99 336 SUPERFAMILY SSF54523 36 325 1.1E-37 T 11-10-2018 AL543_08475 ff2e2c223a73d2a0db36618fc36d4b99 336 Gene3D G3DSA:1.10.40.60 99 215 4.3E-90 T 11-10-2018 IPR038072 GspK, central domain superfamily AL543_08475 ff2e2c223a73d2a0db36618fc36d4b99 336 SUPERFAMILY SSF158544 215 284 7.32E-19 T 11-10-2018 IPR038072 GspK, central domain superfamily AL543_02280 44193396f4d56cfbe21580ee037ec315 168 SUPERFAMILY SSF56420 2 164 4.19E-57 T 11-10-2018 IPR036821 Peptide deformylase superfamily AL543_02280 44193396f4d56cfbe21580ee037ec315 168 Hamap MF_00163 Peptide deformylase [def]. 2 162 29.885 T 11-10-2018 IPR023635 Peptide deformylase AL543_02280 44193396f4d56cfbe21580ee037ec315 168 PRINTS PR01576 Peptide deformylase signature 120 149 3.8E-31 T 11-10-2018 IPR023635 Peptide deformylase AL543_02280 44193396f4d56cfbe21580ee037ec315 168 PRINTS PR01576 Peptide deformylase signature 101 119 3.8E-31 T 11-10-2018 IPR023635 Peptide deformylase AL543_02280 44193396f4d56cfbe21580ee037ec315 168 PRINTS PR01576 Peptide deformylase signature 89 100 3.8E-31 T 11-10-2018 IPR023635 Peptide deformylase AL543_02280 44193396f4d56cfbe21580ee037ec315 168 PRINTS PR01576 Peptide deformylase signature 33 62 3.8E-31 T 11-10-2018 IPR023635 Peptide deformylase AL543_02280 44193396f4d56cfbe21580ee037ec315 168 Gene3D G3DSA:3.90.45.10 1 168 8.7E-67 T 11-10-2018 IPR036821 Peptide deformylase superfamily AL543_02280 44193396f4d56cfbe21580ee037ec315 168 PIRSF PIRSF004749 1 168 2.8E-52 T 11-10-2018 IPR023635 Peptide deformylase AL543_02280 44193396f4d56cfbe21580ee037ec315 168 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 3.4E-50 T 11-10-2018 IPR023635 Peptide deformylase AL543_02280 44193396f4d56cfbe21580ee037ec315 168 Pfam PF01327 Polypeptide deformylase 4 152 2.0E-47 T 11-10-2018 IPR023635 Peptide deformylase AL543_09935 5ea9e14d66b890500291e1b684a65475 312 Gene3D G3DSA:1.10.3720.10 86 306 7.5E-25 T 11-10-2018 IPR035906 MetI-like superfamily AL543_09935 5ea9e14d66b890500291e1b684a65475 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 309 7.8E-30 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL543_09935 5ea9e14d66b890500291e1b684a65475 312 SUPERFAMILY SSF161098 93 295 2.49E-25 T 11-10-2018 IPR035906 MetI-like superfamily AL543_09935 5ea9e14d66b890500291e1b684a65475 312 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 18 69 1.0E-9 T 11-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AL543_09925 f2629f57c39f41a60b23f7f2b63b7ecd 518 SUPERFAMILY SSF53850 26 516 1.3E-126 T 11-10-2018 AL543_09925 f2629f57c39f41a60b23f7f2b63b7ecd 518 PIRSF PIRSF002741 21 501 7.4E-95 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL543_09925 f2629f57c39f41a60b23f7f2b63b7ecd 518 Gene3D G3DSA:3.10.105.10 279 494 2.2E-123 T 11-10-2018 AL543_09925 f2629f57c39f41a60b23f7f2b63b7ecd 518 Gene3D G3DSA:3.90.76.10 57 165 2.2E-123 T 11-10-2018 AL543_09925 f2629f57c39f41a60b23f7f2b63b7ecd 518 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 66 425 6.7E-89 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain AL543_09925 f2629f57c39f41a60b23f7f2b63b7ecd 518 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 72 93 - T 11-10-2018 IPR023765 Solute-binding protein family 5, conserved site AL543_09925 f2629f57c39f41a60b23f7f2b63b7ecd 518 Gene3D G3DSA:3.40.190.10 32 278 2.2E-123 T 11-10-2018 AL543_19755 7a7e977a1bbfd08de0fa2ca14571a250 588 Gene3D G3DSA:3.50.50.60 9 416 6.3E-170 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_19755 7a7e977a1bbfd08de0fa2ca14571a250 588 PIRSF PIRSF000171 1 580 8.2E-48 T 11-10-2018 AL543_19755 7a7e977a1bbfd08de0fa2ca14571a250 588 SUPERFAMILY SSF56425 236 356 2.99E-42 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL543_19755 7a7e977a1bbfd08de0fa2ca14571a250 588 Gene3D G3DSA:4.10.80.40 548 588 9.0E-22 T 11-10-2018 AL543_19755 7a7e977a1bbfd08de0fa2ca14571a250 588 Pfam PF00890 FAD binding domain 9 405 1.3E-118 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL543_19755 7a7e977a1bbfd08de0fa2ca14571a250 588 SUPERFAMILY SSF51905 6 438 9.18E-72 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_19755 7a7e977a1bbfd08de0fa2ca14571a250 588 Gene3D G3DSA:1.20.58.100 432 547 5.2E-38 T 11-10-2018 AL543_19755 7a7e977a1bbfd08de0fa2ca14571a250 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 2.0E-37 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL543_19755 7a7e977a1bbfd08de0fa2ca14571a250 588 SUPERFAMILY SSF46977 451 588 2.75E-47 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL543_19755 7a7e977a1bbfd08de0fa2ca14571a250 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 588 8.8E-241 T 11-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL543_19755 7a7e977a1bbfd08de0fa2ca14571a250 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 11-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL543_19755 7a7e977a1bbfd08de0fa2ca14571a250 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 7 588 5.7E-275 T 11-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL543_19755 7a7e977a1bbfd08de0fa2ca14571a250 588 Gene3D G3DSA:3.90.700.10 246 350 6.3E-170 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL543_07815 b39826a12b2d2d5e099b65d09d7233e6 233 SMART SM00322 60 125 1.8E-7 T 11-10-2018 IPR004087 K Homology domain GO:0003676 AL543_07815 b39826a12b2d2d5e099b65d09d7233e6 233 Pfam PF07650 KH domain 38 111 1.4E-18 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07815 b39826a12b2d2d5e099b65d09d7233e6 233 SUPERFAMILY SSF54814 2 106 1.15E-36 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 AL543_07815 b39826a12b2d2d5e099b65d09d7233e6 233 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 5.8E-99 T 11-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 AL543_07815 b39826a12b2d2d5e099b65d09d7233e6 233 Gene3D G3DSA:3.30.300.20 17 107 1.5E-28 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AL543_07815 b39826a12b2d2d5e099b65d09d7233e6 233 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.055 T 11-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 AL543_07815 b39826a12b2d2d5e099b65d09d7233e6 233 Gene3D G3DSA:3.30.1140.32 108 208 3.3E-45 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07815 b39826a12b2d2d5e099b65d09d7233e6 233 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 11-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07815 b39826a12b2d2d5e099b65d09d7233e6 233 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 5.0E-42 T 11-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07815 b39826a12b2d2d5e099b65d09d7233e6 233 SUPERFAMILY SSF54821 108 206 8.76E-41 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_00275 fbc0e0bc5816d037ac9f7086395bd0df 64 Pfam PF14549 DNA-binding transcriptional regulator Cro 9 48 1.4E-14 T 11-10-2018 AL543_00275 fbc0e0bc5816d037ac9f7086395bd0df 64 Gene3D G3DSA:1.10.260.40 8 56 2.7E-14 T 11-10-2018 AL543_00275 fbc0e0bc5816d037ac9f7086395bd0df 64 SUPERFAMILY SSF47413 10 53 7.31E-9 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL543_00220 4d982e9c5290c04886aa895b25944d2b 513 Gene3D G3DSA:3.40.50.150 3 318 2.4E-43 T 11-10-2018 AL543_00220 4d982e9c5290c04886aa895b25944d2b 513 Pfam PF00145 C-5 cytosine-specific DNA methylase 86 506 5.3E-40 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AL543_00220 4d982e9c5290c04886aa895b25944d2b 513 SUPERFAMILY SSF53335 3 508 9.97E-65 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL543_00220 4d982e9c5290c04886aa895b25944d2b 513 Gene3D G3DSA:3.90.120.10 391 500 7.7E-23 T 11-10-2018 AL543_00220 4d982e9c5290c04886aa895b25944d2b 513 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 82 505 1.1E-36 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AL543_00220 4d982e9c5290c04886aa895b25944d2b 513 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 167 181 2.1E-17 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AL543_00220 4d982e9c5290c04886aa895b25944d2b 513 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 243 256 2.1E-17 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AL543_00220 4d982e9c5290c04886aa895b25944d2b 513 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 5 21 2.1E-17 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AL543_01460 bf1366f6b1337e16af44e15e7ee7f9fa 594 SUPERFAMILY SSF52025 129 252 7.06E-18 T 11-10-2018 AL543_01460 bf1366f6b1337e16af44e15e7ee7f9fa 594 Gene3D G3DSA:3.40.630.10 29 118 2.6E-6 T 11-10-2018 AL543_01460 bf1366f6b1337e16af44e15e7ee7f9fa 594 SUPERFAMILY SSF53187 36 540 5.72E-58 T 11-10-2018 AL543_01460 bf1366f6b1337e16af44e15e7ee7f9fa 594 Pfam PF04389 Peptidase family M28 272 531 1.1E-35 T 11-10-2018 IPR007484 Peptidase M28 AL543_01460 bf1366f6b1337e16af44e15e7ee7f9fa 594 Gene3D G3DSA:3.50.30.30 133 260 2.6E-26 T 11-10-2018 AL543_01460 bf1366f6b1337e16af44e15e7ee7f9fa 594 Pfam PF02225 PA domain 144 245 4.5E-17 T 11-10-2018 IPR003137 PA domain AL543_17675 69572baecfd44fc023b3aa7108503a6d 77 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 1 74 1.9E-34 T 11-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 AL543_17675 69572baecfd44fc023b3aa7108503a6d 77 Pfam PF06667 Phage shock protein B 3 74 1.8E-32 T 11-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 AL543_12520 6c34248e33f224dd9b2f08d2bd37d3e3 98 Gene3D G3DSA:1.10.10.10 6 98 6.1E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_12520 6c34248e33f224dd9b2f08d2bd37d3e3 98 SUPERFAMILY SSF46785 9 97 4.09E-26 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_12520 6c34248e33f224dd9b2f08d2bd37d3e3 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 1.6E-15 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL543_12520 6c34248e33f224dd9b2f08d2bd37d3e3 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 36 47 1.6E-15 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL543_12520 6c34248e33f224dd9b2f08d2bd37d3e3 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 1.6E-15 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL543_12520 6c34248e33f224dd9b2f08d2bd37d3e3 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 1.6E-15 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL543_12520 6c34248e33f224dd9b2f08d2bd37d3e3 98 Pfam PF01022 Bacterial regulatory protein, arsR family 23 68 4.8E-17 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL543_12520 6c34248e33f224dd9b2f08d2bd37d3e3 98 SMART SM00418 15 93 6.1E-29 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL543_17595 02eb44caab695ff8e5ebd52dec146410 308 SUPERFAMILY SSF52540 5 227 2.11E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_17595 02eb44caab695ff8e5ebd52dec146410 308 SMART SM00382 30 212 3.9E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_17595 02eb44caab695ff8e5ebd52dec146410 308 Pfam PF00005 ABC transporter 22 165 7.2E-36 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_17595 02eb44caab695ff8e5ebd52dec146410 308 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_17595 02eb44caab695ff8e5ebd52dec146410 308 Gene3D G3DSA:3.40.50.300 1 237 5.3E-71 T 11-10-2018 AL543_18855 90b42a378a0498600f69f8140a530740 556 SUPERFAMILY SSF50249 88 174 7.17E-13 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL543_18855 90b42a378a0498600f69f8140a530740 556 Gene3D G3DSA:2.40.50.140 6 98 3.9E-17 T 11-10-2018 AL543_18855 90b42a378a0498600f69f8140a530740 556 SUPERFAMILY SSF50249 190 277 2.09E-26 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL543_18855 90b42a378a0498600f69f8140a530740 556 Gene3D G3DSA:2.40.50.140 187 268 5.6E-27 T 11-10-2018 AL543_18855 90b42a378a0498600f69f8140a530740 556 Gene3D G3DSA:2.40.50.140 445 528 1.7E-20 T 11-10-2018 AL543_18855 90b42a378a0498600f69f8140a530740 556 Gene3D G3DSA:2.40.50.140 99 178 2.9E-5 T 11-10-2018 AL543_18855 90b42a378a0498600f69f8140a530740 556 Gene3D G3DSA:2.40.50.140 269 357 2.9E-31 T 11-10-2018 AL543_18855 90b42a378a0498600f69f8140a530740 556 Gene3D G3DSA:2.40.50.140 358 444 6.0E-24 T 11-10-2018 AL543_18855 90b42a378a0498600f69f8140a530740 556 SUPERFAMILY SSF50249 255 360 5.5E-28 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL543_18855 90b42a378a0498600f69f8140a530740 556 PIRSF PIRSF002111 1 534 8.4E-218 T 11-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AL543_18855 90b42a378a0498600f69f8140a530740 556 SUPERFAMILY SSF50249 342 440 8.21E-23 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL543_18855 90b42a378a0498600f69f8140a530740 556 SUPERFAMILY SSF50249 429 539 5.45E-24 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL543_18855 90b42a378a0498600f69f8140a530740 556 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 9.8E-231 T 11-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AL543_18855 90b42a378a0498600f69f8140a530740 556 SMART SM00316 19 87 2.4E-4 T 11-10-2018 IPR022967 RNA-binding domain, S1 AL543_18855 90b42a378a0498600f69f8140a530740 556 SMART SM00316 190 260 1.2E-27 T 11-10-2018 IPR022967 RNA-binding domain, S1 AL543_18855 90b42a378a0498600f69f8140a530740 556 SMART SM00316 362 434 1.3E-21 T 11-10-2018 IPR022967 RNA-binding domain, S1 AL543_18855 90b42a378a0498600f69f8140a530740 556 SMART SM00316 103 171 1.8E-7 T 11-10-2018 IPR022967 RNA-binding domain, S1 AL543_18855 90b42a378a0498600f69f8140a530740 556 SMART SM00316 449 520 6.5E-21 T 11-10-2018 IPR022967 RNA-binding domain, S1 AL543_18855 90b42a378a0498600f69f8140a530740 556 SMART SM00316 275 347 8.3E-27 T 11-10-2018 IPR022967 RNA-binding domain, S1 AL543_18855 90b42a378a0498600f69f8140a530740 556 PRINTS PR00681 Ribosomal protein S1 signature 155 175 4.9E-97 T 11-10-2018 AL543_18855 90b42a378a0498600f69f8140a530740 556 PRINTS PR00681 Ribosomal protein S1 signature 108 124 4.9E-97 T 11-10-2018 AL543_18855 90b42a378a0498600f69f8140a530740 556 PRINTS PR00681 Ribosomal protein S1 signature 330 348 4.9E-97 T 11-10-2018 AL543_18855 90b42a378a0498600f69f8140a530740 556 PRINTS PR00681 Ribosomal protein S1 signature 126 143 4.9E-97 T 11-10-2018 AL543_18855 90b42a378a0498600f69f8140a530740 556 PRINTS PR00681 Ribosomal protein S1 signature 21 39 4.9E-97 T 11-10-2018 AL543_18855 90b42a378a0498600f69f8140a530740 556 PRINTS PR00681 Ribosomal protein S1 signature 212 233 4.9E-97 T 11-10-2018 AL543_18855 90b42a378a0498600f69f8140a530740 556 PRINTS PR00681 Ribosomal protein S1 signature 290 309 4.9E-97 T 11-10-2018 AL543_18855 90b42a378a0498600f69f8140a530740 556 PRINTS PR00681 Ribosomal protein S1 signature 39 53 4.9E-97 T 11-10-2018 AL543_18855 90b42a378a0498600f69f8140a530740 556 PRINTS PR00681 Ribosomal protein S1 signature 84 103 4.9E-97 T 11-10-2018 AL543_18855 90b42a378a0498600f69f8140a530740 556 Pfam PF00575 S1 RNA binding domain 189 260 1.9E-21 T 11-10-2018 IPR003029 S1 domain GO:0003676 AL543_18855 90b42a378a0498600f69f8140a530740 556 Pfam PF00575 S1 RNA binding domain 104 171 1.2E-7 T 11-10-2018 IPR003029 S1 domain GO:0003676 AL543_18855 90b42a378a0498600f69f8140a530740 556 Pfam PF00575 S1 RNA binding domain 275 347 7.9E-21 T 11-10-2018 IPR003029 S1 domain GO:0003676 AL543_18855 90b42a378a0498600f69f8140a530740 556 Pfam PF00575 S1 RNA binding domain 449 520 1.4E-15 T 11-10-2018 IPR003029 S1 domain GO:0003676 AL543_18855 90b42a378a0498600f69f8140a530740 556 Pfam PF00575 S1 RNA binding domain 18 86 3.2E-7 T 11-10-2018 IPR003029 S1 domain GO:0003676 AL543_18855 90b42a378a0498600f69f8140a530740 556 Pfam PF00575 S1 RNA binding domain 362 434 3.8E-20 T 11-10-2018 IPR003029 S1 domain GO:0003676 AL543_18855 90b42a378a0498600f69f8140a530740 556 SUPERFAMILY SSF50249 4 112 1.11E-17 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL543_02140 8f1faf2e81259c86910d8c5c8d8a2ce1 1181 Pfam PF06761 Intracellular multiplication and human macrophage-killing 510 824 3.4E-76 T 11-10-2018 IPR009612 ImcF-related AL543_02140 8f1faf2e81259c86910d8c5c8d8a2ce1 1181 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 25 1177 0.0 T 11-10-2018 IPR017731 Type VI secretion system, IcmF AL543_02140 8f1faf2e81259c86910d8c5c8d8a2ce1 1181 SUPERFAMILY SSF52540 120 325 1.35E-7 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_02140 8f1faf2e81259c86910d8c5c8d8a2ce1 1181 Pfam PF06744 Type VI secretion protein IcmF C-terminal 931 1129 2.0E-58 T 11-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal AL543_02140 8f1faf2e81259c86910d8c5c8d8a2ce1 1181 Pfam PF14331 ImcF-related N-terminal domain 203 460 3.2E-78 T 11-10-2018 IPR025743 ImcF-related, N-terminal domain AL543_02140 8f1faf2e81259c86910d8c5c8d8a2ce1 1181 Gene3D G3DSA:3.40.50.300 130 324 5.9E-6 T 11-10-2018 AL543_14110 b08d0b9772c86162de32c264bb84993f 556 Gene3D G3DSA:3.90.800.10 101 209 2.1E-107 T 11-10-2018 AL543_14110 b08d0b9772c86162de32c264bb84993f 556 Gene3D G3DSA:1.10.1160.10 261 339 3.5E-37 T 11-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 AL543_14110 b08d0b9772c86162de32c264bb84993f 556 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL543_14110 b08d0b9772c86162de32c264bb84993f 556 Gene3D G3DSA:3.40.50.620 30 247 2.1E-107 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL543_14110 b08d0b9772c86162de32c264bb84993f 556 Gene3D G3DSA:2.40.240.10 348 466 8.9E-81 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AL543_14110 b08d0b9772c86162de32c264bb84993f 556 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 552 5.1E-297 T 11-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AL543_14110 b08d0b9772c86162de32c264bb84993f 556 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 529 1.6E-61 T 11-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AL543_14110 b08d0b9772c86162de32c264bb84993f 556 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 3.9E-127 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 AL543_14110 b08d0b9772c86162de32c264bb84993f 556 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 550 54.482 T 11-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 AL543_14110 b08d0b9772c86162de32c264bb84993f 556 Gene3D G3DSA:2.40.240.10 340 547 8.9E-81 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AL543_14110 b08d0b9772c86162de32c264bb84993f 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 6.0E-10 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AL543_14110 b08d0b9772c86162de32c264bb84993f 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 6.0E-10 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AL543_14110 b08d0b9772c86162de32c264bb84993f 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 6.0E-10 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AL543_14110 b08d0b9772c86162de32c264bb84993f 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 6.0E-10 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AL543_14110 b08d0b9772c86162de32c264bb84993f 556 SUPERFAMILY SSF50715 340 549 1.05E-78 T 11-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AL543_14110 b08d0b9772c86162de32c264bb84993f 556 SUPERFAMILY SSF52374 11 337 5.35E-105 T 11-10-2018 AL543_05130 bf838b99479b4149310b4ea8f8e25943 225 Pfam PF04299 Putative FMN-binding domain 18 182 3.0E-57 T 11-10-2018 IPR007396 Transcriptional regulator PAI 2-type AL543_05130 bf838b99479b4149310b4ea8f8e25943 225 PIRSF PIRSF010372 17 225 1.6E-68 T 11-10-2018 IPR007396 Transcriptional regulator PAI 2-type AL543_05130 bf838b99479b4149310b4ea8f8e25943 225 Gene3D G3DSA:2.30.110.10 17 224 2.5E-68 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AL543_05130 bf838b99479b4149310b4ea8f8e25943 225 SUPERFAMILY SSF50475 28 208 3.6E-32 T 11-10-2018 AL543_07370 8f003542a8784f89fb6c14153b1b1f89 953 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL543_07370 8f003542a8784f89fb6c14153b1b1f89 953 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 933 0.0 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AL543_07370 8f003542a8784f89fb6c14153b1b1f89 953 SUPERFAMILY SSF50677 190 365 8.11E-60 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AL543_07370 8f003542a8784f89fb6c14153b1b1f89 953 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 951 16.047 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AL543_07370 8f003542a8784f89fb6c14153b1b1f89 953 Gene3D G3DSA:3.90.740.10 242 301 6.1E-6 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AL543_07370 8f003542a8784f89fb6c14153b1b1f89 953 PRINTS PR00986 Valyl-tRNA synthetase signature 369 382 2.0E-35 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AL543_07370 8f003542a8784f89fb6c14153b1b1f89 953 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 2.0E-35 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AL543_07370 8f003542a8784f89fb6c14153b1b1f89 953 PRINTS PR00986 Valyl-tRNA synthetase signature 500 518 2.0E-35 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AL543_07370 8f003542a8784f89fb6c14153b1b1f89 953 PRINTS PR00986 Valyl-tRNA synthetase signature 35 46 2.0E-35 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AL543_07370 8f003542a8784f89fb6c14153b1b1f89 953 PRINTS PR00986 Valyl-tRNA synthetase signature 469 490 2.0E-35 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AL543_07370 8f003542a8784f89fb6c14153b1b1f89 953 Gene3D G3DSA:3.90.740.10 204 241 6.1E-6 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AL543_07370 8f003542a8784f89fb6c14153b1b1f89 953 Gene3D G3DSA:3.40.50.620 320 555 6.0E-71 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL543_07370 8f003542a8784f89fb6c14153b1b1f89 953 SUPERFAMILY SSF46589 886 950 8.89E-18 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 AL543_07370 8f003542a8784f89fb6c14153b1b1f89 953 Gene3D G3DSA:1.10.287.380 879 951 1.3E-18 T 11-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 AL543_07370 8f003542a8784f89fb6c14153b1b1f89 953 SUPERFAMILY SSF52374 1 641 1.67E-137 T 11-10-2018 AL543_07370 8f003542a8784f89fb6c14153b1b1f89 953 Gene3D G3DSA:3.40.50.620 2 203 2.6E-65 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL543_07370 8f003542a8784f89fb6c14153b1b1f89 953 Pfam PF08264 Anticodon-binding domain of tRNA 675 827 9.4E-40 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 AL543_07370 8f003542a8784f89fb6c14153b1b1f89 953 SUPERFAMILY SSF47323 642 900 1.66E-67 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL543_07370 8f003542a8784f89fb6c14153b1b1f89 953 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 631 3.5E-225 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL543_07370 8f003542a8784f89fb6c14153b1b1f89 953 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 886 946 3.7E-18 T 11-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 AL543_07370 8f003542a8784f89fb6c14153b1b1f89 953 Gene3D G3DSA:1.10.730.10 577 819 3.3E-69 T 11-10-2018 AL543_01010 17c58ae8f6443e8edc9f133e2d8db7ae 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 1.6E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_01010 17c58ae8f6443e8edc9f133e2d8db7ae 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 1.6E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_01010 17c58ae8f6443e8edc9f133e2d8db7ae 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 1.6E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_01010 17c58ae8f6443e8edc9f133e2d8db7ae 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.6E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_01010 17c58ae8f6443e8edc9f133e2d8db7ae 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 1.6E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_01010 17c58ae8f6443e8edc9f133e2d8db7ae 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 1.6E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_01010 17c58ae8f6443e8edc9f133e2d8db7ae 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 8.0E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_01010 17c58ae8f6443e8edc9f133e2d8db7ae 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 8.0E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_01010 17c58ae8f6443e8edc9f133e2d8db7ae 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 8.0E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_01010 17c58ae8f6443e8edc9f133e2d8db7ae 239 Pfam PF00106 short chain dehydrogenase 5 187 6.9E-51 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_01010 17c58ae8f6443e8edc9f133e2d8db7ae 239 SUPERFAMILY SSF51735 4 223 1.83E-61 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_01010 17c58ae8f6443e8edc9f133e2d8db7ae 239 Gene3D G3DSA:3.40.50.720 1 239 5.9E-75 T 11-10-2018 AL543_01010 17c58ae8f6443e8edc9f133e2d8db7ae 239 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 132 160 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL543_11595 53b922969061ff2428277022de339b7b 162 Pfam PF10263 SprT-like family 32 115 1.7E-18 T 11-10-2018 IPR006640 SprT-like AL543_11595 53b922969061ff2428277022de339b7b 162 SMART SM00731 12 161 8.3E-64 T 11-10-2018 IPR006640 SprT-like AL543_11595 53b922969061ff2428277022de339b7b 162 Hamap MF_00746 Protein SprT [sprT]. 8 161 42.093 T 11-10-2018 IPR023483 Uncharacterised protein family SprT AL543_11595 53b922969061ff2428277022de339b7b 162 Pfam PF17283 SprT-like zinc ribbon domain 121 159 3.0E-9 T 11-10-2018 IPR035240 SprT-like, zinc ribbon domain AL543_18080 5e41e37c57b7265e453ce883dd61ff7d 495 SUPERFAMILY SSF52540 126 459 5.06E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_18080 5e41e37c57b7265e453ce883dd61ff7d 495 Gene3D G3DSA:3.40.50.300 240 462 4.1E-70 T 11-10-2018 AL543_18080 5e41e37c57b7265e453ce883dd61ff7d 495 Gene3D G3DSA:3.30.450.380 33 239 6.4E-43 T 11-10-2018 AL543_18080 5e41e37c57b7265e453ce883dd61ff7d 495 Pfam PF00437 Type II/IV secretion system protein 144 421 4.9E-83 T 11-10-2018 IPR001482 Type II/IV secretion system protein AL543_08570 3e7945d19d80f707c6e462e9247af4d1 469 SMART SM01230 102 379 4.0E-153 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AL543_08570 3e7945d19d80f707c6e462e9247af4d1 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 1.9E-140 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AL543_08570 3e7945d19d80f707c6e462e9247af4d1 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 11-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AL543_08570 3e7945d19d80f707c6e462e9247af4d1 469 Gene3D G3DSA:3.10.20.70 2 104 2.6E-41 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AL543_08570 3e7945d19d80f707c6e462e9247af4d1 469 SUPERFAMILY SSF55931 102 468 8.44E-140 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AL543_08570 3e7945d19d80f707c6e462e9247af4d1 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 11-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AL543_08570 3e7945d19d80f707c6e462e9247af4d1 469 SUPERFAMILY SSF54368 3 100 9.42E-37 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AL543_08570 3e7945d19d80f707c6e462e9247af4d1 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 11-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AL543_08570 3e7945d19d80f707c6e462e9247af4d1 469 Gene3D G3DSA:3.30.590.10 105 457 2.4E-150 T 11-10-2018 AL543_08570 3e7945d19d80f707c6e462e9247af4d1 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 1.0E-213 T 11-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AL543_08570 3e7945d19d80f707c6e462e9247af4d1 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 1.4E-31 T 11-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AL543_10295 09572206be3cd605a4c2c21fbf49bd78 589 Pfam PF01522 Polysaccharide deacetylase 405 541 2.7E-33 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AL543_10295 09572206be3cd605a4c2c21fbf49bd78 589 Gene3D G3DSA:3.40.50.2000 167 334 3.2E-5 T 11-10-2018 AL543_10295 09572206be3cd605a4c2c21fbf49bd78 589 SUPERFAMILY SSF88713 366 563 6.23E-40 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AL543_10295 09572206be3cd605a4c2c21fbf49bd78 589 SUPERFAMILY SSF53756 10 338 9.74E-34 T 11-10-2018 AL543_10295 09572206be3cd605a4c2c21fbf49bd78 589 Gene3D G3DSA:3.20.20.370 338 576 9.8E-60 T 11-10-2018 AL543_10295 09572206be3cd605a4c2c21fbf49bd78 589 Pfam PF13439 Glycosyltransferase Family 4 13 158 9.6E-24 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AL543_10295 09572206be3cd605a4c2c21fbf49bd78 589 Gene3D G3DSA:3.40.50.2000 1 166 7.3E-22 T 11-10-2018 AL543_07390 073c0a680c1f409f724ab5d3b921988d 390 Pfam PF05987 Bacterial protein of unknown function (DUF898) 7 382 2.0E-91 T 11-10-2018 IPR010295 Protein of unknown function DUF898 AL543_07365 0f5a14b6c9d53aba2eab386b4495a85f 149 Gene3D G3DSA:3.40.50.10110 1 146 4.9E-42 T 11-10-2018 IPR036768 DNA polymerase III subunit chi superfamily AL543_07365 0f5a14b6c9d53aba2eab386b4495a85f 149 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 142 1.7E-32 T 11-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 AL543_07365 0f5a14b6c9d53aba2eab386b4495a85f 149 SUPERFAMILY SSF102400 1 145 8.63E-43 T 11-10-2018 IPR036768 DNA polymerase III subunit chi superfamily AL543_05800 f0075a1c4b21fea820c2e4ffa2188a17 482 Gene3D G3DSA:2.40.160.10 55 482 9.5E-17 T 11-10-2018 IPR023614 Porin domain superfamily AL543_05800 f0075a1c4b21fea820c2e4ffa2188a17 482 Pfam PF03573 outer membrane porin, OprD family 365 480 1.0E-12 T 11-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 AL543_02745 6819896776eeb9ed54284056a1f0be8c 442 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 373 4.7E-148 T 11-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AL543_02745 6819896776eeb9ed54284056a1f0be8c 442 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 6 440 7.5E-147 T 11-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AL543_02745 6819896776eeb9ed54284056a1f0be8c 442 PIRSF PIRSF004539 1 441 5.2E-182 T 11-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AL543_02800 eb6ebeb3d819f3d827b9ff9425fbbb96 416 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 147 158 - T 11-10-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 AL543_02800 eb6ebeb3d819f3d827b9ff9425fbbb96 416 SUPERFAMILY SSF52266 146 408 3.51E-25 T 11-10-2018 AL543_02800 eb6ebeb3d819f3d827b9ff9425fbbb96 416 Gene3D G3DSA:3.40.50.1110 127 411 2.8E-40 T 11-10-2018 IPR036514 SGNH hydrolase superfamily AL543_02800 eb6ebeb3d819f3d827b9ff9425fbbb96 416 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 147 406 1.4E-14 T 11-10-2018 IPR001087 GDSL lipase/esterase GO:0016788 AL543_02070 4b1912560c558c21e59a849320f71fea 334 SUPERFAMILY SSF81901 50 106 6.15E-5 T 11-10-2018 AL543_02070 4b1912560c558c21e59a849320f71fea 334 Gene3D G3DSA:1.25.40.10 26 323 1.2E-18 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_02070 4b1912560c558c21e59a849320f71fea 334 SUPERFAMILY SSF81901 127 290 1.31E-10 T 11-10-2018 AL543_08295 1f6dec325341b003dac8b43f86cdd157 228 SMART SM00448 2 111 3.7E-43 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_08295 1f6dec325341b003dac8b43f86cdd157 228 Gene3D G3DSA:3.40.50.2300 1 126 5.0E-37 T 11-10-2018 AL543_08295 1f6dec325341b003dac8b43f86cdd157 228 SUPERFAMILY SSF46894 126 225 4.82E-23 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL543_08295 1f6dec325341b003dac8b43f86cdd157 228 SMART SM00862 148 224 3.6E-18 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL543_08295 1f6dec325341b003dac8b43f86cdd157 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 224 5.8E-19 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL543_08295 1f6dec325341b003dac8b43f86cdd157 228 Gene3D G3DSA:1.10.10.10 127 228 3.0E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_08295 1f6dec325341b003dac8b43f86cdd157 228 SUPERFAMILY SSF52172 1 121 2.28E-38 T 11-10-2018 IPR011006 CheY-like superfamily AL543_08295 1f6dec325341b003dac8b43f86cdd157 228 Pfam PF00072 Response regulator receiver domain 4 112 4.5E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_02025 98713d354a75b8f219ed772a58e86bf9 435 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 7 412 47.426 T 11-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AL543_02025 98713d354a75b8f219ed772a58e86bf9 435 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 10 411 1.4E-183 T 11-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AL543_02025 98713d354a75b8f219ed772a58e86bf9 435 Gene3D G3DSA:3.20.140.10 1 426 1.1E-176 T 11-10-2018 AL543_02025 98713d354a75b8f219ed772a58e86bf9 435 SUPERFAMILY SSF51690 128 410 1.26E-84 T 11-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AL543_02025 98713d354a75b8f219ed772a58e86bf9 435 PIRSF PIRSF000484 1 398 1.3E-63 T 11-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 AL543_02025 98713d354a75b8f219ed772a58e86bf9 435 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 177 410 2.1E-83 T 11-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 AL543_02025 98713d354a75b8f219ed772a58e86bf9 435 SUPERFAMILY SSF54675 7 146 4.0E-35 T 11-10-2018 AL543_01505 e4e8b066abb048b9c694de570b35b269 75 SMART SM00530 6 62 7.7E-6 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL543_01505 e4e8b066abb048b9c694de570b35b269 75 Gene3D G3DSA:1.10.260.40 2 71 8.5E-10 T 11-10-2018 AL543_01505 e4e8b066abb048b9c694de570b35b269 75 SUPERFAMILY SSF47413 1 69 9.29E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL543_01505 e4e8b066abb048b9c694de570b35b269 75 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 6 66 2.2E-21 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL543_20005 2927a445b0425eec45d7a51e65d1219d 376 Gene3D G3DSA:1.20.58.1830 5 33 4.7E-74 T 11-10-2018 AL543_20005 2927a445b0425eec45d7a51e65d1219d 376 Gene3D G3DSA:1.20.1330.10 185 327 7.0E-18 T 11-10-2018 AL543_20005 2927a445b0425eec45d7a51e65d1219d 376 SUPERFAMILY SSF64518 1 375 1.01E-98 T 11-10-2018 AL543_20005 2927a445b0425eec45d7a51e65d1219d 376 PRINTS PR00207 Flagellin signature 37 54 5.4E-27 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL543_20005 2927a445b0425eec45d7a51e65d1219d 376 PRINTS PR00207 Flagellin signature 76 95 5.4E-27 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL543_20005 2927a445b0425eec45d7a51e65d1219d 376 PRINTS PR00207 Flagellin signature 111 134 5.4E-27 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL543_20005 2927a445b0425eec45d7a51e65d1219d 376 Gene3D G3DSA:1.10.8.410 328 375 4.5E-21 T 11-10-2018 AL543_20005 2927a445b0425eec45d7a51e65d1219d 376 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 5.1E-44 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL543_20005 2927a445b0425eec45d7a51e65d1219d 376 Pfam PF00700 Bacterial flagellin C-terminal helical region 291 375 4.3E-26 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL543_20005 2927a445b0425eec45d7a51e65d1219d 376 Gene3D G3DSA:1.20.1330.10 45 179 4.7E-74 T 11-10-2018 AL543_20005 2927a445b0425eec45d7a51e65d1219d 376 Pfam PF07196 Flagellin hook IN motif 193 247 3.8E-12 T 11-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 AL543_12895 69a9ff505469a3fc1e963e1d70077cb9 556 Gene3D G3DSA:3.20.20.360 24 434 4.2E-188 T 11-10-2018 AL543_12895 69a9ff505469a3fc1e963e1d70077cb9 556 PIRSF PIRSF001363 24 556 1.8E-250 T 11-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AL543_12895 69a9ff505469a3fc1e963e1d70077cb9 556 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 46 555 1.4E-270 T 11-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AL543_12895 69a9ff505469a3fc1e963e1d70077cb9 556 Pfam PF01274 Malate synthase 34 555 3.9E-197 T 11-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AL543_12895 69a9ff505469a3fc1e963e1d70077cb9 556 SUPERFAMILY SSF51645 29 555 2.75E-186 T 11-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AL543_12895 69a9ff505469a3fc1e963e1d70077cb9 556 ProSitePatterns PS00510 Malate synthase signature. 289 304 - T 11-10-2018 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AL543_12895 69a9ff505469a3fc1e963e1d70077cb9 556 Gene3D G3DSA:1.20.1220.12 435 556 3.9E-47 T 11-10-2018 AL543_19650 9d6149be8feb9ee205c87cb169c36bee 244 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 7 240 61.691 T 11-10-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AL543_19650 9d6149be8feb9ee205c87cb169c36bee 244 Pfam PF04545 Sigma-70, region 4 187 234 3.2E-18 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 AL543_19650 9d6149be8feb9ee205c87cb169c36bee 244 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 20 238 4.3E-82 T 11-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AL543_19650 9d6149be8feb9ee205c87cb169c36bee 244 SUPERFAMILY SSF88659 92 162 8.28E-16 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AL543_19650 9d6149be8feb9ee205c87cb169c36bee 244 SUPERFAMILY SSF88659 163 240 5.61E-20 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AL543_19650 9d6149be8feb9ee205c87cb169c36bee 244 PIRSF PIRSF000770 3 242 1.9E-35 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL543_19650 9d6149be8feb9ee205c87cb169c36bee 244 Pfam PF04542 Sigma-70 region 2 20 91 3.7E-15 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AL543_19650 9d6149be8feb9ee205c87cb169c36bee 244 SUPERFAMILY SSF88946 6 91 1.83E-22 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AL543_19650 9d6149be8feb9ee205c87cb169c36bee 244 Gene3D G3DSA:1.10.1740.10 4 88 3.5E-26 T 11-10-2018 AL543_19650 9d6149be8feb9ee205c87cb169c36bee 244 Pfam PF04539 Sigma-70 region 3 100 172 4.7E-14 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 AL543_19650 9d6149be8feb9ee205c87cb169c36bee 244 Gene3D G3DSA:1.20.140.160 90 239 1.6E-43 T 11-10-2018 AL543_19650 9d6149be8feb9ee205c87cb169c36bee 244 PRINTS PR00046 Major sigma-70 factor signature 46 59 7.3E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL543_19650 9d6149be8feb9ee205c87cb169c36bee 244 PRINTS PR00046 Major sigma-70 factor signature 222 233 7.3E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL543_19650 9d6149be8feb9ee205c87cb169c36bee 244 PRINTS PR00046 Major sigma-70 factor signature 190 202 7.3E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL543_19650 9d6149be8feb9ee205c87cb169c36bee 244 PRINTS PR00046 Major sigma-70 factor signature 207 222 7.3E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL543_19650 9d6149be8feb9ee205c87cb169c36bee 244 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 237 1.5E-30 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AL543_16495 22f5516bc12cb299528d2688a467649e 709 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 239 503 1.7E-18 T 11-10-2018 IPR018712 Domain of unknown function DUF2235 AL543_02445 74e0597bce1c9ea10a289576a4c4dd81 69 PIRSF PIRSF002599 1 69 3.0E-23 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 AL543_02445 74e0597bce1c9ea10a289576a4c4dd81 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 11-10-2018 IPR019844 Cold-shock conserved site AL543_02445 74e0597bce1c9ea10a289576a4c4dd81 69 PRINTS PR00050 Cold shock protein signature 7 22 1.5E-17 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL543_02445 74e0597bce1c9ea10a289576a4c4dd81 69 PRINTS PR00050 Cold shock protein signature 42 60 1.5E-17 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL543_02445 74e0597bce1c9ea10a289576a4c4dd81 69 PRINTS PR00050 Cold shock protein signature 27 36 1.5E-17 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL543_02445 74e0597bce1c9ea10a289576a4c4dd81 69 SUPERFAMILY SSF50249 3 68 2.45E-24 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL543_02445 74e0597bce1c9ea10a289576a4c4dd81 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 67 2.5E-29 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL543_02445 74e0597bce1c9ea10a289576a4c4dd81 69 Gene3D G3DSA:2.40.50.140 5 68 6.3E-29 T 11-10-2018 AL543_02445 74e0597bce1c9ea10a289576a4c4dd81 69 SMART SM00357 6 69 3.8E-31 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 AL543_08540 85b47deb5d0e5e90efce601922d7491f 310 Gene3D G3DSA:3.10.129.10 149 300 2.7E-43 T 11-10-2018 AL543_08540 85b47deb5d0e5e90efce601922d7491f 310 Gene3D G3DSA:3.40.630.30 3 147 3.6E-27 T 11-10-2018 AL543_08540 85b47deb5d0e5e90efce601922d7491f 310 Pfam PF13673 Acetyltransferase (GNAT) domain 61 146 2.4E-11 T 11-10-2018 IPR000182 GNAT domain AL543_08540 85b47deb5d0e5e90efce601922d7491f 310 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 159 298 2.3E-50 T 11-10-2018 IPR012660 Thioesterase, putative AL543_08540 85b47deb5d0e5e90efce601922d7491f 310 SUPERFAMILY SSF54637 156 298 9.33E-39 T 11-10-2018 IPR029069 HotDog domain superfamily AL543_08540 85b47deb5d0e5e90efce601922d7491f 310 SUPERFAMILY SSF55729 4 162 1.74E-29 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL543_08540 85b47deb5d0e5e90efce601922d7491f 310 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 166 298 6.0E-44 T 11-10-2018 IPR012660 Thioesterase, putative AL543_01245 78b129805c7f6d29b792462b0f1cc3e8 486 Pfam PF00005 ABC transporter 47 199 2.1E-19 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_01245 78b129805c7f6d29b792462b0f1cc3e8 486 SMART SM00382 314 485 1.6E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_01245 78b129805c7f6d29b792462b0f1cc3e8 486 SMART SM00382 55 247 1.4E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_01245 78b129805c7f6d29b792462b0f1cc3e8 486 ProSitePatterns PS00211 ABC transporters family signature. 413 427 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_01245 78b129805c7f6d29b792462b0f1cc3e8 486 Gene3D G3DSA:3.40.50.300 27 289 1.3E-51 T 11-10-2018 AL543_01245 78b129805c7f6d29b792462b0f1cc3e8 486 Gene3D G3DSA:3.40.50.300 290 486 2.0E-45 T 11-10-2018 AL543_01245 78b129805c7f6d29b792462b0f1cc3e8 486 Pfam PF00005 ABC transporter 306 441 1.3E-24 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_01245 78b129805c7f6d29b792462b0f1cc3e8 486 SUPERFAMILY SSF52540 280 486 8.91E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_01245 78b129805c7f6d29b792462b0f1cc3e8 486 SUPERFAMILY SSF52540 27 275 4.67E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_10275 ca7e12261fc5eb19258d3eaf668cf80a 345 Gene3D G3DSA:3.40.50.2000 163 344 5.4E-59 T 11-10-2018 AL543_10275 ca7e12261fc5eb19258d3eaf668cf80a 345 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 70 321 2.1E-69 T 11-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 AL543_10275 ca7e12261fc5eb19258d3eaf668cf80a 345 Gene3D G3DSA:3.40.50.2000 1 147 4.2E-55 T 11-10-2018 AL543_10275 ca7e12261fc5eb19258d3eaf668cf80a 345 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 2 340 8.0E-148 T 11-10-2018 IPR011910 ADP-heptose--LPS heptosyltransferase 2 GO:0009103|GO:0016757 AL543_10275 ca7e12261fc5eb19258d3eaf668cf80a 345 SUPERFAMILY SSF53756 1 343 4.39E-102 T 11-10-2018 AL543_01015 d67c69dc48c25f07cbdcedf5b76c0a66 300 Pfam PF03466 LysR substrate binding domain 92 294 1.8E-38 T 11-10-2018 IPR005119 LysR, substrate-binding AL543_01015 d67c69dc48c25f07cbdcedf5b76c0a66 300 Gene3D G3DSA:1.10.10.10 6 94 9.8E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_01015 d67c69dc48c25f07cbdcedf5b76c0a66 300 Gene3D G3DSA:3.40.190.290 96 294 1.9E-60 T 11-10-2018 AL543_01015 d67c69dc48c25f07cbdcedf5b76c0a66 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 1.9E-20 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_01015 d67c69dc48c25f07cbdcedf5b76c0a66 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 8.5E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_01015 d67c69dc48c25f07cbdcedf5b76c0a66 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 8.5E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_01015 d67c69dc48c25f07cbdcedf5b76c0a66 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 8.5E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_01015 d67c69dc48c25f07cbdcedf5b76c0a66 300 SUPERFAMILY SSF53850 93 298 1.01E-38 T 11-10-2018 AL543_01015 d67c69dc48c25f07cbdcedf5b76c0a66 300 SUPERFAMILY SSF46785 7 86 9.35E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_17435 b80be2be837eff7c7a28e0d4539bfd52 231 SMART SM00363 1 59 3.1E-5 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_17435 b80be2be837eff7c7a28e0d4539bfd52 231 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 98 112 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AL543_17435 b80be2be837eff7c7a28e0d4539bfd52 231 Pfam PF01479 S4 domain 1 44 3.3E-5 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_17435 b80be2be837eff7c7a28e0d4539bfd52 231 Gene3D G3DSA:3.30.70.580 62 226 1.3E-59 T 11-10-2018 AL543_17435 b80be2be837eff7c7a28e0d4539bfd52 231 Gene3D G3DSA:3.10.290.10 1 61 1.2E-15 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AL543_17435 b80be2be837eff7c7a28e0d4539bfd52 231 Gene3D G3DSA:3.30.70.1560 127 208 1.3E-59 T 11-10-2018 AL543_17435 b80be2be837eff7c7a28e0d4539bfd52 231 Pfam PF00849 RNA pseudouridylate synthase 61 191 6.5E-18 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL543_17435 b80be2be837eff7c7a28e0d4539bfd52 231 SUPERFAMILY SSF55174 1 56 8.24E-11 T 11-10-2018 AL543_17435 b80be2be837eff7c7a28e0d4539bfd52 231 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 65 223 1.7E-49 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AL543_17435 b80be2be837eff7c7a28e0d4539bfd52 231 SUPERFAMILY SSF55120 60 226 4.0E-47 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL543_11940 d47cb8154136c90e1ba1f9ccf9f7108b 461 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL543_11940 d47cb8154136c90e1ba1f9ccf9f7108b 461 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 1.5E-21 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL543_11940 d47cb8154136c90e1ba1f9ccf9f7108b 461 Gene3D G3DSA:1.20.120.140 4 305 3.1E-122 T 11-10-2018 AL543_11940 d47cb8154136c90e1ba1f9ccf9f7108b 461 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 34.074 T 11-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 AL543_11940 d47cb8154136c90e1ba1f9ccf9f7108b 461 SMART SM00382 99 247 2.2E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_11940 d47cb8154136c90e1ba1f9ccf9f7108b 461 Pfam PF02978 Signal peptide binding domain 329 427 4.4E-34 T 11-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AL543_11940 d47cb8154136c90e1ba1f9ccf9f7108b 461 SUPERFAMILY SSF47446 329 430 1.8E-38 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AL543_11940 d47cb8154136c90e1ba1f9ccf9f7108b 461 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 9.7E-179 T 11-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 AL543_11940 d47cb8154136c90e1ba1f9ccf9f7108b 461 Gene3D G3DSA:3.40.50.300 90 285 3.1E-122 T 11-10-2018 AL543_11940 d47cb8154136c90e1ba1f9ccf9f7108b 461 SMART SM00962 100 296 1.2E-115 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL543_11940 d47cb8154136c90e1ba1f9ccf9f7108b 461 Gene3D G3DSA:1.10.260.30 328 451 6.6E-46 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AL543_11940 d47cb8154136c90e1ba1f9ccf9f7108b 461 SUPERFAMILY SSF52540 42 353 1.96E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_11940 d47cb8154136c90e1ba1f9ccf9f7108b 461 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 9.7E-75 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL543_11940 d47cb8154136c90e1ba1f9ccf9f7108b 461 SMART SM00963 1 86 8.6E-36 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL543_04095 3513f7be74279a8196ca74bc40c55e50 224 Gene3D G3DSA:3.40.50.1000 5 218 1.6E-64 T 11-10-2018 IPR023214 HAD superfamily AL543_04095 3513f7be74279a8196ca74bc40c55e50 224 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 64 195 3.1E-9 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL543_04095 3513f7be74279a8196ca74bc40c55e50 224 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 96 189 7.0E-17 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL543_04095 3513f7be74279a8196ca74bc40c55e50 224 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 3 222 8.4E-99 T 11-10-2018 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 AL543_04095 3513f7be74279a8196ca74bc40c55e50 224 Gene3D G3DSA:1.10.150.240 16 95 1.6E-64 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AL543_04095 3513f7be74279a8196ca74bc40c55e50 224 SUPERFAMILY SSF56784 2 222 1.71E-51 T 11-10-2018 IPR036412 HAD-like superfamily AL543_04095 3513f7be74279a8196ca74bc40c55e50 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 194 7.1E-24 T 11-10-2018 AL543_07455 836a418514f73f3c08193a393c91b525 109 Pfam PF13466 STAS domain 16 92 1.2E-15 T 11-10-2018 IPR002645 STAS domain AL543_07455 836a418514f73f3c08193a393c91b525 109 SUPERFAMILY SSF52091 1 97 1.33E-17 T 11-10-2018 IPR036513 STAS domain superfamily AL543_07455 836a418514f73f3c08193a393c91b525 109 Gene3D G3DSA:3.30.750.24 8 100 2.2E-12 T 11-10-2018 IPR036513 STAS domain superfamily AL543_10500 b0109ad3274a129f3ff71d53de6dab7a 649 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 11-10-2018 IPR020845 AMP-binding, conserved site AL543_10500 b0109ad3274a129f3ff71d53de6dab7a 649 Pfam PF00501 AMP-binding enzyme 84 522 2.5E-94 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AL543_10500 b0109ad3274a129f3ff71d53de6dab7a 649 Gene3D G3DSA:3.40.50.12780 50 515 7.2E-105 T 11-10-2018 AL543_10500 b0109ad3274a129f3ff71d53de6dab7a 649 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 6.8E-23 T 11-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 AL543_10500 b0109ad3274a129f3ff71d53de6dab7a 649 Gene3D G3DSA:3.30.300.30 518 649 1.4E-30 T 11-10-2018 AL543_10500 b0109ad3274a129f3ff71d53de6dab7a 649 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 609 4.1E-25 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL543_10500 b0109ad3274a129f3ff71d53de6dab7a 649 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 645 52.617 T 11-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 AL543_10500 b0109ad3274a129f3ff71d53de6dab7a 649 SUPERFAMILY SSF56801 8 644 2.35E-184 T 11-10-2018 AL543_10500 b0109ad3274a129f3ff71d53de6dab7a 649 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 643 0.0 T 11-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 AL543_07265 14df302167896a8e15455f9545255f71 363 SMART SM01329 7 356 3.3E-200 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AL543_07265 14df302167896a8e15455f9545255f71 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 356 1.1E-135 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AL543_07265 14df302167896a8e15455f9545255f71 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 248 267 - T 11-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 AL543_07265 14df302167896a8e15455f9545255f71 363 SUPERFAMILY SSF53659 4 360 3.96E-122 T 11-10-2018 AL543_07265 14df302167896a8e15455f9545255f71 363 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 7 355 1.2E-163 T 11-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 AL543_07265 14df302167896a8e15455f9545255f71 363 Gene3D G3DSA:3.40.718.10 1 363 8.9E-155 T 11-10-2018 AL543_07265 14df302167896a8e15455f9545255f71 363 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 6 360 51.131 T 11-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 AL543_10110 7cfb4cb38d78af2b55bab2e5a6846bbb 653 SUPERFAMILY SSF81345 338 648 6.93E-62 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AL543_10110 7cfb4cb38d78af2b55bab2e5a6846bbb 653 Gene3D G3DSA:1.10.3470.10 333 651 1.9E-69 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AL543_10110 7cfb4cb38d78af2b55bab2e5a6846bbb 653 Gene3D G3DSA:1.10.3470.10 1 328 1.7E-61 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AL543_10110 7cfb4cb38d78af2b55bab2e5a6846bbb 653 Pfam PF01032 FecCD transport family 372 648 2.8E-66 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AL543_10110 7cfb4cb38d78af2b55bab2e5a6846bbb 653 Pfam PF01032 FecCD transport family 12 323 8.1E-61 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AL543_10110 7cfb4cb38d78af2b55bab2e5a6846bbb 653 SUPERFAMILY SSF81345 4 323 7.72E-55 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AL543_01130 19bb723001e20499bb52c25724a5c6b0 211 SUPERFAMILY SSF50475 14 211 1.66E-65 T 11-10-2018 AL543_01130 19bb723001e20499bb52c25724a5c6b0 211 Gene3D G3DSA:2.30.110.10 13 211 3.9E-77 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AL543_01130 19bb723001e20499bb52c25724a5c6b0 211 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 1 211 3.8E-88 T 11-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AL543_01130 19bb723001e20499bb52c25724a5c6b0 211 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 171 211 3.6E-20 T 11-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AL543_01130 19bb723001e20499bb52c25724a5c6b0 211 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 33 116 2.1E-23 T 11-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AL543_01130 19bb723001e20499bb52c25724a5c6b0 211 PIRSF PIRSF000190 1 211 7.2E-79 T 11-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AL543_01130 19bb723001e20499bb52c25724a5c6b0 211 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 181 194 - T 11-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AL543_01130 19bb723001e20499bb52c25724a5c6b0 211 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 9 211 37.485 T 11-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AL543_18740 8257e531c6878e876efffe5fa86e048b 106 Gene3D G3DSA:3.30.750.24 4 105 2.3E-16 T 11-10-2018 IPR036513 STAS domain superfamily AL543_18740 8257e531c6878e876efffe5fa86e048b 106 SUPERFAMILY SSF52091 13 101 2.55E-18 T 11-10-2018 IPR036513 STAS domain superfamily AL543_18740 8257e531c6878e876efffe5fa86e048b 106 Pfam PF01740 STAS domain 11 95 2.7E-10 T 11-10-2018 IPR002645 STAS domain AL543_07070 b48ecfa38bde8f50d90852b76aec0f86 738 SMART SM00954 250 360 1.6E-63 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 AL543_07070 b48ecfa38bde8f50d90852b76aec0f86 738 SUPERFAMILY SSF81301 207 380 2.45E-61 T 11-10-2018 AL543_07070 b48ecfa38bde8f50d90852b76aec0f86 738 Pfam PF13328 HD domain 56 190 2.1E-37 T 11-10-2018 IPR003607 HD/PDEase domain AL543_07070 b48ecfa38bde8f50d90852b76aec0f86 738 Gene3D G3DSA:3.10.20.30 397 470 1.8E-31 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AL543_07070 b48ecfa38bde8f50d90852b76aec0f86 738 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 64 736 3.0E-184 T 11-10-2018 IPR004811 RelA/SpoT family GO:0015969 AL543_07070 b48ecfa38bde8f50d90852b76aec0f86 738 Gene3D G3DSA:3.30.70.260 659 738 3.0E-15 T 11-10-2018 AL543_07070 b48ecfa38bde8f50d90852b76aec0f86 738 Pfam PF04607 Region found in RelA / SpoT proteins 250 359 1.7E-36 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 AL543_07070 b48ecfa38bde8f50d90852b76aec0f86 738 Gene3D G3DSA:1.10.3210.10 51 205 1.4E-36 T 11-10-2018 AL543_07070 b48ecfa38bde8f50d90852b76aec0f86 738 SUPERFAMILY SSF109604 32 205 3.77E-43 T 11-10-2018 AL543_07070 b48ecfa38bde8f50d90852b76aec0f86 738 SUPERFAMILY SSF55021 661 736 1.42E-10 T 11-10-2018 AL543_07070 b48ecfa38bde8f50d90852b76aec0f86 738 SUPERFAMILY SSF81271 396 462 2.83E-21 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AL543_07070 b48ecfa38bde8f50d90852b76aec0f86 738 Pfam PF13291 ACT domain 660 736 3.1E-15 T 11-10-2018 IPR002912 ACT domain AL543_07070 b48ecfa38bde8f50d90852b76aec0f86 738 Pfam PF02824 TGS domain 403 462 3.3E-22 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 AL543_07070 b48ecfa38bde8f50d90852b76aec0f86 738 Gene3D G3DSA:3.30.460.10 208 340 3.7E-49 T 11-10-2018 AL543_18680 655c70ad9c125191d3993371e7b5adb6 260 Gene3D G3DSA:1.20.1260.10 9 76 2.5E-15 T 11-10-2018 IPR012347 Ferritin-like AL543_18680 655c70ad9c125191d3993371e7b5adb6 260 Gene3D G3DSA:1.20.1260.10 99 260 6.5E-56 T 11-10-2018 IPR012347 Ferritin-like AL543_18680 655c70ad9c125191d3993371e7b5adb6 260 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 11 254 6.1E-124 T 11-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 AL543_18680 655c70ad9c125191d3993371e7b5adb6 260 SUPERFAMILY SSF47240 13 257 3.75E-74 T 11-10-2018 IPR009078 Ferritin-like superfamily AL543_18680 655c70ad9c125191d3993371e7b5adb6 260 PIRSF PIRSF020736 4 259 1.4E-93 T 11-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 AL543_15605 c69dbb01880587f1dd4d1b84eee74963 195 SUPERFAMILY SSF48695 48 191 4.07E-26 T 11-10-2018 IPR036280 Multiheme cytochrome superfamily AL543_15605 c69dbb01880587f1dd4d1b84eee74963 195 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 152 189 1.3E-4 T 11-10-2018 IPR010177 Doubled CXXCH motif AL543_15605 c69dbb01880587f1dd4d1b84eee74963 195 TIGRFAM TIGR03146 cyt_nit_nrfB: cytochrome c nitrite reductase, pentaheme subunit 42 189 2.0E-60 T 11-10-2018 IPR017564 Cytochrome c nitrite reductase, pentahaem subunit GO:0006807|GO:0020037|GO:0042597 AL543_15605 c69dbb01880587f1dd4d1b84eee74963 195 Gene3D G3DSA:1.10.1130.10 109 192 7.4E-6 T 11-10-2018 AL543_16745 acfbf84d419f91982808b173c77deb71 869 Gene3D G3DSA:2.60.40.1840 444 545 8.7E-37 T 11-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily AL543_16745 acfbf84d419f91982808b173c77deb71 869 Gene3D G3DSA:2.60.40.1730 15 194 1.1E-71 T 11-10-2018 AL543_16745 acfbf84d419f91982808b173c77deb71 869 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 12 867 0.0 T 11-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 AL543_16745 acfbf84d419f91982808b173c77deb71 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 294 309 3.6E-9 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AL543_16745 acfbf84d419f91982808b173c77deb71 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 125 140 3.6E-9 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AL543_16745 acfbf84d419f91982808b173c77deb71 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 313 325 3.6E-9 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AL543_16745 acfbf84d419f91982808b173c77deb71 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 258 268 3.6E-9 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AL543_16745 acfbf84d419f91982808b173c77deb71 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 176 191 3.6E-9 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AL543_16745 acfbf84d419f91982808b173c77deb71 869 SUPERFAMILY SSF63737 3 193 4.45E-46 T 11-10-2018 AL543_16745 acfbf84d419f91982808b173c77deb71 869 Gene3D G3DSA:1.25.50.10 546 868 1.3E-114 T 11-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily AL543_16745 acfbf84d419f91982808b173c77deb71 869 Gene3D G3DSA:1.10.1740.60 195 279 8.7E-40 T 11-10-2018 AL543_16745 acfbf84d419f91982808b173c77deb71 869 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 548 868 1.4E-113 T 11-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal AL543_16745 acfbf84d419f91982808b173c77deb71 869 Gene3D G3DSA:1.10.390.10 280 443 5.3E-65 T 11-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily AL543_16745 acfbf84d419f91982808b173c77deb71 869 SUPERFAMILY SSF55486 204 450 8.06E-75 T 11-10-2018 AL543_16745 acfbf84d419f91982808b173c77deb71 869 Pfam PF01433 Peptidase family M1 domain 208 436 8.2E-58 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AL543_16745 acfbf84d419f91982808b173c77deb71 869 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 444 544 6.3E-34 T 11-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold AL543_06910 dbef74bd6c4bb17dd67b0ea00fe6c858 156 SUPERFAMILY SSF54523 12 139 7.85E-20 T 11-10-2018 AL543_06910 dbef74bd6c4bb17dd67b0ea00fe6c858 156 Gene3D G3DSA:3.30.700.10 12 156 1.0E-25 T 11-10-2018 AL543_06910 dbef74bd6c4bb17dd67b0ea00fe6c858 156 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 31 5.9E-11 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL543_06910 dbef74bd6c4bb17dd67b0ea00fe6c858 156 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL543_06910 dbef74bd6c4bb17dd67b0ea00fe6c858 156 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 32 9.7E-11 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL543_07920 2f3409c57841c268b070b954338865f8 69 Gene3D G3DSA:1.10.10.610 1 67 4.9E-30 T 11-10-2018 IPR036685 YehU-like superfamily AL543_07920 2f3409c57841c268b070b954338865f8 69 PIRSF PIRSF006169 1 68 2.4E-35 T 11-10-2018 IPR010648 Uncharacterised protein family UPF0270 AL543_07920 2f3409c57841c268b070b954338865f8 69 SUPERFAMILY SSF118001 1 65 1.23E-28 T 11-10-2018 IPR036685 YehU-like superfamily AL543_07920 2f3409c57841c268b070b954338865f8 69 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 65 8.4E-35 T 11-10-2018 IPR010648 Uncharacterised protein family UPF0270 AL543_07920 2f3409c57841c268b070b954338865f8 69 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 55 3.0E-24 T 11-10-2018 IPR010648 Uncharacterised protein family UPF0270 AL543_17980 f3011cc1e254de86fbef471869293183 401 Pfam PF07055 Enoyl reductase FAD binding domain 326 389 2.4E-29 T 11-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL543_17980 f3011cc1e254de86fbef471869293183 401 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 395 56.601 T 11-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL543_17980 f3011cc1e254de86fbef471869293183 401 Gene3D G3DSA:3.40.50.720 1 399 4.9E-180 T 11-10-2018 AL543_17980 f3011cc1e254de86fbef471869293183 401 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 79 2.7E-37 T 11-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL543_17980 f3011cc1e254de86fbef471869293183 401 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 317 6.6E-112 T 11-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL543_10280 34f6816c7a6be1b25d155f6110ba6b26 242 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 2 177 7.0E-42 T 11-10-2018 IPR002654 Glycosyl transferase, family 25 AL543_02490 56ca8204b19b4a9fe7638f253aed0bd9 274 PRINTS PR00169 Potassium channel signature 119 142 1.4E-7 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AL543_02490 56ca8204b19b4a9fe7638f253aed0bd9 274 PRINTS PR00169 Potassium channel signature 178 204 1.4E-7 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AL543_02490 56ca8204b19b4a9fe7638f253aed0bd9 274 PRINTS PR00169 Potassium channel signature 149 171 1.4E-7 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AL543_02490 56ca8204b19b4a9fe7638f253aed0bd9 274 SUPERFAMILY SSF81324 21 206 1.71E-37 T 11-10-2018 AL543_02490 56ca8204b19b4a9fe7638f253aed0bd9 274 Pfam PF07885 Ion channel 128 205 7.0E-18 T 11-10-2018 IPR013099 Potassium channel domain AL543_02490 56ca8204b19b4a9fe7638f253aed0bd9 274 Gene3D G3DSA:1.10.287.70 13 206 1.0E-37 T 11-10-2018 AL543_11395 7e07aca0091eb7dfc70ad1f5e54c740c 160 PIRSF PIRSF000194 1 160 6.9E-64 T 11-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 AL543_11395 7e07aca0091eb7dfc70ad1f5e54c740c 160 PRINTS PR00070 Dihydrofolate reductase signature 92 106 7.7E-14 T 11-10-2018 AL543_11395 7e07aca0091eb7dfc70ad1f5e54c740c 160 PRINTS PR00070 Dihydrofolate reductase signature 14 24 7.7E-14 T 11-10-2018 AL543_11395 7e07aca0091eb7dfc70ad1f5e54c740c 160 PRINTS PR00070 Dihydrofolate reductase signature 41 52 7.7E-14 T 11-10-2018 AL543_11395 7e07aca0091eb7dfc70ad1f5e54c740c 160 PRINTS PR00070 Dihydrofolate reductase signature 28 36 7.7E-14 T 11-10-2018 AL543_11395 7e07aca0091eb7dfc70ad1f5e54c740c 160 Pfam PF00186 Dihydrofolate reductase 2 159 3.6E-62 T 11-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AL543_11395 7e07aca0091eb7dfc70ad1f5e54c740c 160 SUPERFAMILY SSF53597 1 160 6.81E-58 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AL543_11395 7e07aca0091eb7dfc70ad1f5e54c740c 160 Gene3D G3DSA:3.40.430.10 1 160 4.9E-60 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AL543_18590 a735792628d088139f7ee51472b2cbf0 429 SUPERFAMILY SSF51905 165 346 2.33E-25 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_18590 a735792628d088139f7ee51472b2cbf0 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 2.7E-12 T 11-10-2018 AL543_18590 a735792628d088139f7ee51472b2cbf0 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 2.7E-12 T 11-10-2018 AL543_18590 a735792628d088139f7ee51472b2cbf0 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 167 185 2.7E-12 T 11-10-2018 AL543_18590 a735792628d088139f7ee51472b2cbf0 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 2.7E-12 T 11-10-2018 AL543_18590 a735792628d088139f7ee51472b2cbf0 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 4.0E-6 T 11-10-2018 AL543_18590 a735792628d088139f7ee51472b2cbf0 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 167 192 4.0E-6 T 11-10-2018 AL543_18590 a735792628d088139f7ee51472b2cbf0 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 4.0E-6 T 11-10-2018 AL543_18590 a735792628d088139f7ee51472b2cbf0 429 SUPERFAMILY SSF51905 3 219 5.01E-27 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_18590 a735792628d088139f7ee51472b2cbf0 429 Gene3D G3DSA:3.50.50.100 1 406 8.2E-114 T 11-10-2018 AL543_18590 a735792628d088139f7ee51472b2cbf0 429 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 333 2.1E-63 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL543_14650 316d0e2c7b3086a1bd9d8fab99198f3f 397 SUPERFAMILY SSF51338 10 385 5.18E-8 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AL543_14650 316d0e2c7b3086a1bd9d8fab99198f3f 397 Pfam PF01979 Amidohydrolase family 55 383 2.3E-23 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AL543_14650 316d0e2c7b3086a1bd9d8fab99198f3f 397 Gene3D G3DSA:2.30.40.10 13 381 4.8E-121 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AL543_14650 316d0e2c7b3086a1bd9d8fab99198f3f 397 PIRSF PIRSF038994 4 387 3.3E-119 T 11-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 AL543_14650 316d0e2c7b3086a1bd9d8fab99198f3f 397 SUPERFAMILY SSF51556 58 354 1.32E-97 T 11-10-2018 IPR032466 Metal-dependent hydrolase AL543_14650 316d0e2c7b3086a1bd9d8fab99198f3f 397 Gene3D G3DSA:3.20.20.140 58 354 4.8E-121 T 11-10-2018 AL543_14650 316d0e2c7b3086a1bd9d8fab99198f3f 397 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 13 380 9.6E-91 T 11-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 AL543_06085 e3927b67629940d6585c9c6752a91c4d 153 SUPERFAMILY SSF54637 10 149 2.44E-49 T 11-10-2018 IPR029069 HotDog domain superfamily AL543_06085 e3927b67629940d6585c9c6752a91c4d 153 Gene3D G3DSA:3.10.129.10 4 153 2.3E-60 T 11-10-2018 AL543_06085 e3927b67629940d6585c9c6752a91c4d 153 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 11 152 36.67 T 11-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL543_06085 e3927b67629940d6585c9c6752a91c4d 153 Pfam PF07977 FabA-like domain 20 144 3.5E-41 T 11-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL543_06085 e3927b67629940d6585c9c6752a91c4d 153 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 11 149 1.2E-58 T 11-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL543_10405 1f976e2f12f67cf29bc1418959d63b44 530 SMART SM00798 137 462 1.2E-214 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL543_10405 1f976e2f12f67cf29bc1418959d63b44 530 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 461 2.6E-117 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL543_10405 1f976e2f12f67cf29bc1418959d63b44 530 SUPERFAMILY SSF52335 7 196 9.42E-72 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AL543_10405 1f976e2f12f67cf29bc1418959d63b44 530 SMART SM00851 19 132 2.2E-61 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain AL543_10405 1f976e2f12f67cf29bc1418959d63b44 530 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 9 530 3.6E-259 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL543_10405 1f976e2f12f67cf29bc1418959d63b44 530 SUPERFAMILY SSF53927 222 530 2.71E-129 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AL543_10405 1f976e2f12f67cf29bc1418959d63b44 530 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 530 45.351 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL543_10405 1f976e2f12f67cf29bc1418959d63b44 530 Pfam PF02142 MGS-like domain 19 132 2.7E-30 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain AL543_10405 1f976e2f12f67cf29bc1418959d63b44 530 Gene3D G3DSA:3.40.50.1380 1 200 6.6E-87 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AL543_10405 1f976e2f12f67cf29bc1418959d63b44 530 Gene3D G3DSA:3.40.140.20 220 373 2.2E-57 T 11-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL543_10405 1f976e2f12f67cf29bc1418959d63b44 530 Gene3D G3DSA:3.40.140.20 394 530 3.2E-59 T 11-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL543_10405 1f976e2f12f67cf29bc1418959d63b44 530 PIRSF PIRSF000414 1 530 1.4E-228 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL543_18050 623a2a4a912747be29081bab88af6c0b 284 Pfam PF01418 Helix-turn-helix domain, rpiR family 12 78 1.2E-7 T 11-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AL543_18050 623a2a4a912747be29081bab88af6c0b 284 Gene3D G3DSA:3.40.50.10490 97 278 3.4E-23 T 11-10-2018 AL543_18050 623a2a4a912747be29081bab88af6c0b 284 Pfam PF01380 SIS domain 131 255 1.6E-10 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL543_18050 623a2a4a912747be29081bab88af6c0b 284 SUPERFAMILY SSF53697 98 264 4.67E-15 T 11-10-2018 AL543_18050 623a2a4a912747be29081bab88af6c0b 284 Gene3D G3DSA:1.10.10.10 2 78 9.0E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_18050 623a2a4a912747be29081bab88af6c0b 284 SUPERFAMILY SSF46689 11 80 6.63E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_13210 666b92f8fe8bede68c53c333d03fab71 325 Gene3D G3DSA:1.10.287.70 228 325 1.9E-16 T 11-10-2018 AL543_13210 666b92f8fe8bede68c53c333d03fab71 325 SUPERFAMILY SSF141571 53 140 4.19E-14 T 11-10-2018 AL543_13210 666b92f8fe8bede68c53c333d03fab71 325 Pfam PF00805 Pentapeptide repeats (8 copies) 101 139 6.3E-6 T 11-10-2018 IPR001646 Pentapeptide repeat AL543_13210 666b92f8fe8bede68c53c333d03fab71 325 SUPERFAMILY SSF81324 229 325 2.49E-17 T 11-10-2018 AL543_13210 666b92f8fe8bede68c53c333d03fab71 325 Gene3D G3DSA:2.160.20.100 38 176 4.1E-16 T 11-10-2018 AL543_13210 666b92f8fe8bede68c53c333d03fab71 325 Pfam PF07885 Ion channel 239 324 3.5E-16 T 11-10-2018 IPR013099 Potassium channel domain AL543_14050 82f935819a4da75b2514b1d97b0e9595 173 Pfam PF17323 Trans-membrane regulatory protein ToxS 22 170 4.4E-71 T 11-10-2018 IPR035288 Trans-membrane regulatory protein ToxS GO:0016021 AL543_14050 82f935819a4da75b2514b1d97b0e9595 173 ProDom PD016359 TRANSMEMBRANE TOXS REGULATORY MEMBRANE PERIPLASMIC 3 172 6.0E-80 T 11-10-2018 IPR035288 Trans-membrane regulatory protein ToxS GO:0016021 AL543_02935 edf3742de9980c9b3029161b33e891b1 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 4.4E-5 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL543_02935 edf3742de9980c9b3029161b33e891b1 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 4.4E-5 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL543_02935 edf3742de9980c9b3029161b33e891b1 251 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 6.1E-16 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL543_02935 edf3742de9980c9b3029161b33e891b1 251 Gene3D G3DSA:1.10.10.10 1 63 5.1E-6 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_02935 edf3742de9980c9b3029161b33e891b1 251 SUPERFAMILY SSF100950 75 233 7.53E-24 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AL543_02935 edf3742de9980c9b3029161b33e891b1 251 SMART SM01134 74 232 1.0E-41 T 11-10-2018 AL543_02935 edf3742de9980c9b3029161b33e891b1 251 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 11-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AL543_02935 edf3742de9980c9b3029161b33e891b1 251 SUPERFAMILY SSF46785 5 63 3.87E-13 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_02935 edf3742de9980c9b3029161b33e891b1 251 SMART SM00420 6 58 3.8E-16 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL543_02935 edf3742de9980c9b3029161b33e891b1 251 Pfam PF00455 DeoR C terminal sensor domain 76 230 4.2E-38 T 11-10-2018 IPR014036 DeoR C-terminal sensor domain AL543_07425 a68e23d1426339147549bc6f4cf903fe 309 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 1.7E-114 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL543_07425 a68e23d1426339147549bc6f4cf903fe 309 SUPERFAMILY SSF53671 4 306 9.43E-101 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AL543_07425 a68e23d1426339147549bc6f4cf903fe 309 Gene3D G3DSA:3.40.50.1370 135 292 1.4E-119 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AL543_07425 a68e23d1426339147549bc6f4cf903fe 309 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL543_07425 a68e23d1426339147549bc6f4cf903fe 309 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 3.5E-43 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AL543_07425 a68e23d1426339147549bc6f4cf903fe 309 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 5.5E-33 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AL543_07425 a68e23d1426339147549bc6f4cf903fe 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 1.1E-25 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL543_07425 a68e23d1426339147549bc6f4cf903fe 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 1.1E-25 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL543_07425 a68e23d1426339147549bc6f4cf903fe 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 1.1E-25 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL543_07425 a68e23d1426339147549bc6f4cf903fe 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 1.1E-25 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL543_07425 a68e23d1426339147549bc6f4cf903fe 309 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 38.344 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL543_07425 a68e23d1426339147549bc6f4cf903fe 309 Gene3D G3DSA:3.40.50.1370 8 304 1.4E-119 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AL543_07425 a68e23d1426339147549bc6f4cf903fe 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 5.1E-36 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL543_07425 a68e23d1426339147549bc6f4cf903fe 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 5.1E-36 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL543_07425 a68e23d1426339147549bc6f4cf903fe 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 5.1E-36 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL543_07425 a68e23d1426339147549bc6f4cf903fe 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 5.1E-36 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL543_07425 a68e23d1426339147549bc6f4cf903fe 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 5.1E-36 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL543_07425 a68e23d1426339147549bc6f4cf903fe 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 5.1E-36 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL543_17910 b6c2a3b1bf504c470ceca430bf75353e 195 SUPERFAMILY SSF159894 6 103 1.18E-31 T 11-10-2018 AL543_17910 b6c2a3b1bf504c470ceca430bf75353e 195 Gene3D G3DSA:3.30.1460.30 1 105 1.5E-36 T 11-10-2018 AL543_17910 b6c2a3b1bf504c470ceca430bf75353e 195 Pfam PF04993 TfoX N-terminal domain 12 102 7.8E-30 T 11-10-2018 IPR007076 TfoX, N-terminal AL543_17910 b6c2a3b1bf504c470ceca430bf75353e 195 Gene3D G3DSA:1.10.150.20 115 195 2.1E-24 T 11-10-2018 AL543_17910 b6c2a3b1bf504c470ceca430bf75353e 195 Pfam PF04994 TfoX C-terminal domain 115 194 1.2E-32 T 11-10-2018 IPR007077 TfoX, C-terminal AL543_17910 b6c2a3b1bf504c470ceca430bf75353e 195 PIRSF PIRSF028788 1 195 2.2E-48 T 11-10-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type AL543_07855 d5e8f1b6ec236ee887e5ebd1562bfb17 246 Pfam PF00588 SpoU rRNA Methylase family 97 237 1.3E-38 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AL543_07855 d5e8f1b6ec236ee887e5ebd1562bfb17 246 SMART SM00967 5 81 8.6E-21 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 AL543_07855 d5e8f1b6ec236ee887e5ebd1562bfb17 246 SUPERFAMILY SSF55315 3 77 1.41E-19 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like AL543_07855 d5e8f1b6ec236ee887e5ebd1562bfb17 246 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 4 243 3.7E-86 T 11-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 AL543_07855 d5e8f1b6ec236ee887e5ebd1562bfb17 246 Gene3D G3DSA:3.30.1330.30 1 77 7.8E-26 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like AL543_07855 d5e8f1b6ec236ee887e5ebd1562bfb17 246 SUPERFAMILY SSF75217 69 244 5.1E-48 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AL543_07855 d5e8f1b6ec236ee887e5ebd1562bfb17 246 Gene3D G3DSA:3.40.1280.10 78 244 7.4E-65 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL543_07855 d5e8f1b6ec236ee887e5ebd1562bfb17 246 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 3 244 43.407 T 11-10-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB AL543_07855 d5e8f1b6ec236ee887e5ebd1562bfb17 246 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 5 80 5.7E-20 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 AL543_12785 bf41d3da60eb505945a8e84936d3e08d 225 SUPERFAMILY SSF52172 1 171 3.42E-38 T 11-10-2018 IPR011006 CheY-like superfamily AL543_12785 bf41d3da60eb505945a8e84936d3e08d 225 Gene3D G3DSA:3.40.50.2300 1 119 8.8E-34 T 11-10-2018 AL543_12785 bf41d3da60eb505945a8e84936d3e08d 225 SMART SM00448 1 113 4.2E-35 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_12785 bf41d3da60eb505945a8e84936d3e08d 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 221 1.0E-15 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL543_12785 bf41d3da60eb505945a8e84936d3e08d 225 Gene3D G3DSA:1.10.10.10 120 225 1.0E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_12785 bf41d3da60eb505945a8e84936d3e08d 225 SMART SM00862 146 221 8.7E-10 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL543_12785 bf41d3da60eb505945a8e84936d3e08d 225 Pfam PF00072 Response regulator receiver domain 4 113 2.0E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_16620 8abd8c96eb0918c8aee6548f1884534c 790 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 279 762 3.0E-79 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AL543_16620 8abd8c96eb0918c8aee6548f1884534c 790 Pfam PF00702 haloacid dehalogenase-like hydrolase 497 695 2.1E-34 T 11-10-2018 AL543_16620 8abd8c96eb0918c8aee6548f1884534c 790 SUPERFAMILY SSF56784 500 782 2.48E-49 T 11-10-2018 IPR036412 HAD-like superfamily AL543_16620 8abd8c96eb0918c8aee6548f1884534c 790 Gene3D G3DSA:3.40.1110.10 511 615 6.2E-69 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AL543_16620 8abd8c96eb0918c8aee6548f1884534c 790 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 503 509 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AL543_16620 8abd8c96eb0918c8aee6548f1884534c 790 Pfam PF00122 E1-E2 ATPase 318 478 1.9E-47 T 11-10-2018 AL543_16620 8abd8c96eb0918c8aee6548f1884534c 790 PRINTS PR00943 Copper-transporting ATPase signature 276 295 3.4E-6 T 11-10-2018 AL543_16620 8abd8c96eb0918c8aee6548f1884534c 790 PRINTS PR00943 Copper-transporting ATPase signature 135 155 3.4E-6 T 11-10-2018 AL543_16620 8abd8c96eb0918c8aee6548f1884534c 790 PRINTS PR00943 Copper-transporting ATPase signature 296 314 3.4E-6 T 11-10-2018 AL543_16620 8abd8c96eb0918c8aee6548f1884534c 790 PRINTS PR00943 Copper-transporting ATPase signature 660 677 3.4E-6 T 11-10-2018 AL543_16620 8abd8c96eb0918c8aee6548f1884534c 790 ProSitePatterns PS01229 Hypothetical cof family signature 2. 682 704 - T 11-10-2018 AL543_16620 8abd8c96eb0918c8aee6548f1884534c 790 Gene3D G3DSA:3.30.70.100 89 157 7.4E-14 T 11-10-2018 AL543_16620 8abd8c96eb0918c8aee6548f1884534c 790 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 4 86 4.5E-27 T 11-10-2018 IPR021993 Putative metal-binding domain of cation transport ATPase AL543_16620 8abd8c96eb0918c8aee6548f1884534c 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 353 367 5.5E-27 T 11-10-2018 AL543_16620 8abd8c96eb0918c8aee6548f1884534c 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 682 701 5.5E-27 T 11-10-2018 AL543_16620 8abd8c96eb0918c8aee6548f1884534c 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 705 717 5.5E-27 T 11-10-2018 AL543_16620 8abd8c96eb0918c8aee6548f1884534c 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 501 515 5.5E-27 T 11-10-2018 AL543_16620 8abd8c96eb0918c8aee6548f1884534c 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 630 640 5.5E-27 T 11-10-2018 AL543_16620 8abd8c96eb0918c8aee6548f1884534c 790 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 273 786 2.4E-126 T 11-10-2018 AL543_16620 8abd8c96eb0918c8aee6548f1884534c 790 Gene3D G3DSA:2.70.150.20 292 407 3.4E-33 T 11-10-2018 AL543_16620 8abd8c96eb0918c8aee6548f1884534c 790 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 228 784 2.1E-156 T 11-10-2018 AL543_16620 8abd8c96eb0918c8aee6548f1884534c 790 SUPERFAMILY SSF55008 86 162 1.44E-17 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 AL543_16620 8abd8c96eb0918c8aee6548f1884534c 790 Pfam PF00403 Heavy-metal-associated domain 93 154 2.8E-9 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AL543_16620 8abd8c96eb0918c8aee6548f1884534c 790 SUPERFAMILY SSF81653 318 402 1.57E-23 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 AL543_16620 8abd8c96eb0918c8aee6548f1884534c 790 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 245 784 5.1E-166 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AL543_16620 8abd8c96eb0918c8aee6548f1884534c 790 Gene3D G3DSA:3.40.50.1000 482 720 6.2E-69 T 11-10-2018 IPR023214 HAD superfamily AL543_16620 8abd8c96eb0918c8aee6548f1884534c 790 SUPERFAMILY SSF81665 251 766 1.16E-9 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 AL543_09545 7f32c59ba6715b7378857e0be3b0c182 85 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 8 76 24.888 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor AL543_09545 7f32c59ba6715b7378857e0be3b0c182 85 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 23 75 1.0E-25 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor AL543_09545 7f32c59ba6715b7378857e0be3b0c182 85 SMART SM01234 8 75 8.0E-44 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor AL543_09545 7f32c59ba6715b7378857e0be3b0c182 85 Pfam PF01809 Haemolytic domain 10 75 1.1E-29 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor AL543_09545 7f32c59ba6715b7378857e0be3b0c182 85 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 13 82 1.7E-32 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor AL543_14410 3e21254898c3b641f1b720a913d510ab 145 Pfam PF03692 Putative zinc- or iron-chelating domain 23 91 3.9E-9 T 11-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein AL543_14410 3e21254898c3b641f1b720a913d510ab 145 PIRSF PIRSF006173 1 144 1.5E-64 T 11-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 AL543_14410 3e21254898c3b641f1b720a913d510ab 145 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 1 144 42.122 T 11-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 AL543_01965 6d7713c946c9b4461f6597b7839f89c6 477 Pfam PF03600 Citrate transporter 46 421 8.3E-52 T 11-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 AL543_08405 7f580eb59248f7868d5d66b88e538bbf 493 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_08405 7f580eb59248f7868d5d66b88e538bbf 493 Pfam PF00005 ABC transporter 20 169 1.6E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_08405 7f580eb59248f7868d5d66b88e538bbf 493 SUPERFAMILY SSF52540 259 479 7.79E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_08405 7f580eb59248f7868d5d66b88e538bbf 493 ProSitePatterns PS00211 ABC transporters family signature. 397 411 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_08405 7f580eb59248f7868d5d66b88e538bbf 493 Pfam PF00005 ABC transporter 270 424 4.2E-21 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_08405 7f580eb59248f7868d5d66b88e538bbf 493 SMART SM00382 279 472 0.0017 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_08405 7f580eb59248f7868d5d66b88e538bbf 493 SMART SM00382 29 216 4.6E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_08405 7f580eb59248f7868d5d66b88e538bbf 493 Gene3D G3DSA:3.40.50.300 244 492 1.1E-41 T 11-10-2018 AL543_08405 7f580eb59248f7868d5d66b88e538bbf 493 Gene3D G3DSA:3.40.50.300 1 243 2.6E-56 T 11-10-2018 AL543_08405 7f580eb59248f7868d5d66b88e538bbf 493 SUPERFAMILY SSF52540 4 225 6.37E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_18705 55c42c966254f2e2feca62d2defa2fdb 288 Pfam PF00005 ABC transporter 26 186 1.9E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_18705 55c42c966254f2e2feca62d2defa2fdb 288 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 280 4.7E-6 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL543_18705 55c42c966254f2e2feca62d2defa2fdb 288 Gene3D G3DSA:3.40.50.300 4 284 2.1E-90 T 11-10-2018 AL543_18705 55c42c966254f2e2feca62d2defa2fdb 288 SMART SM00382 35 244 4.6E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_18705 55c42c966254f2e2feca62d2defa2fdb 288 SUPERFAMILY SSF52540 6 257 7.76E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_18705 55c42c966254f2e2feca62d2defa2fdb 288 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_16640 eec65e50e600526066820b1228ec7d36 206 SUPERFAMILY SSF46626 21 202 9.44E-29 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL543_16640 eec65e50e600526066820b1228ec7d36 206 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 9 186 1.4E-82 T 11-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO AL543_16640 eec65e50e600526066820b1228ec7d36 206 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 9 188 1.0E-82 T 11-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO AL543_16640 eec65e50e600526066820b1228ec7d36 206 Gene3D G3DSA:1.10.760.10 46 206 1.3E-73 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL543_07715 53e2a444852f855428604a46d2795594 128 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.737 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_07715 53e2a444852f855428604a46d2795594 128 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 1.4E-49 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_07715 53e2a444852f855428604a46d2795594 128 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_07715 53e2a444852f855428604a46d2795594 128 Gene3D G3DSA:3.90.1030.10 1 117 3.0E-48 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_07715 53e2a444852f855428604a46d2795594 128 SUPERFAMILY SSF64263 1 119 3.4E-51 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_07715 53e2a444852f855428604a46d2795594 128 Pfam PF01196 Ribosomal protein L17 20 116 7.6E-35 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_13300 72f77673704fee2297de4ec5d4dee487 107 Gene3D G3DSA:3.30.70.20 2 107 8.5E-27 T 11-10-2018 AL543_13300 72f77673704fee2297de4ec5d4dee487 107 Pfam PF11953 Domain of unknown function (DUF3470) 68 107 4.4E-19 T 11-10-2018 IPR022569 Ferredoxin, C-terminal AL543_13300 72f77673704fee2297de4ec5d4dee487 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 5.5E-12 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 AL543_13300 72f77673704fee2297de4ec5d4dee487 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 5.5E-12 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 AL543_13300 72f77673704fee2297de4ec5d4dee487 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 5.5E-12 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 AL543_13300 72f77673704fee2297de4ec5d4dee487 107 Pfam PF13187 4Fe-4S dicluster domain 8 55 9.8E-7 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL543_13300 72f77673704fee2297de4ec5d4dee487 107 SUPERFAMILY SSF54862 3 100 4.61E-23 T 11-10-2018 AL543_18945 831a24cd5d5b094253bd6750ceeaa318 641 Pfam PF00563 EAL domain 380 614 3.6E-59 T 11-10-2018 IPR001633 EAL domain AL543_18945 831a24cd5d5b094253bd6750ceeaa318 641 SMART SM00052 372 619 3.4E-66 T 11-10-2018 IPR001633 EAL domain AL543_18945 831a24cd5d5b094253bd6750ceeaa318 641 Gene3D G3DSA:3.20.20.450 377 627 6.0E-73 T 11-10-2018 IPR035919 EAL domain superfamily AL543_18945 831a24cd5d5b094253bd6750ceeaa318 641 SMART SM00267 187 362 3.0E-23 T 11-10-2018 IPR000160 GGDEF domain AL543_18945 831a24cd5d5b094253bd6750ceeaa318 641 SUPERFAMILY SSF141868 383 627 4.97E-68 T 11-10-2018 IPR035919 EAL domain superfamily AL543_18945 831a24cd5d5b094253bd6750ceeaa318 641 Pfam PF00990 Diguanylate cyclase, GGDEF domain 198 355 4.4E-26 T 11-10-2018 IPR000160 GGDEF domain AL543_18945 831a24cd5d5b094253bd6750ceeaa318 641 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 195 361 1.7E-21 T 11-10-2018 IPR000160 GGDEF domain AL543_18945 831a24cd5d5b094253bd6750ceeaa318 641 SUPERFAMILY SSF55073 203 363 5.73E-26 T 11-10-2018 IPR029787 Nucleotide cyclase AL543_18945 831a24cd5d5b094253bd6750ceeaa318 641 Gene3D G3DSA:3.30.70.270 194 376 3.2E-33 T 11-10-2018 AL543_20465 435942167fedfff9b2b188de910c7df5 281 Gene3D G3DSA:3.60.20.10 1 258 7.5E-100 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL543_20465 435942167fedfff9b2b188de910c7df5 281 SUPERFAMILY SSF56235 2 253 2.74E-51 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL543_20465 435942167fedfff9b2b188de910c7df5 281 Pfam PF13230 Glutamine amidotransferases class-II 1 256 3.4E-113 T 11-10-2018 IPR026869 Putative glutamine amidotransferase type 2 AL543_08030 1b6d532173e8aa997fde388d2cdc8583 338 SUPERFAMILY SSF53067 185 326 3.0E-7 T 11-10-2018 AL543_08030 1b6d532173e8aa997fde388d2cdc8583 338 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 3 329 3.1E-113 T 11-10-2018 IPR005883 Type IV pilus assembly protein PilM AL543_08030 1b6d532173e8aa997fde388d2cdc8583 338 SUPERFAMILY SSF53067 5 165 9.23E-6 T 11-10-2018 AL543_08030 1b6d532173e8aa997fde388d2cdc8583 338 PIRSF PIRSF019169 1 330 2.2E-84 T 11-10-2018 IPR005883 Type IV pilus assembly protein PilM AL543_08030 1b6d532173e8aa997fde388d2cdc8583 338 Gene3D G3DSA:3.30.420.40 2 138 8.9E-10 T 11-10-2018 AL543_08030 1b6d532173e8aa997fde388d2cdc8583 338 Pfam PF11104 Type IV pilus assembly protein PilM; 8 328 1.4E-47 T 11-10-2018 IPR005883 Type IV pilus assembly protein PilM AL543_08030 1b6d532173e8aa997fde388d2cdc8583 338 Gene3D G3DSA:3.30.420.40 229 293 6.1E-6 T 11-10-2018 AL543_16965 5f6d723d877cbec8dd26d8a0c7465caf 67 Pfam PF14255 Cysteine-rich CPXCG 10 60 5.9E-21 T 11-10-2018 IPR025990 Cysteine-rich CPXCG protein AL543_16965 5f6d723d877cbec8dd26d8a0c7465caf 67 PIRSF PIRSF037225 1 65 3.9E-26 T 11-10-2018 IPR017143 Uncharacterised conserved protein UCP037225 AL543_11310 4d7dbded9badadd57af7c9f89c2cc962 505 Pfam PF00474 Sodium:solute symporter family 34 416 1.4E-45 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AL543_11310 4d7dbded9badadd57af7c9f89c2cc962 505 Gene3D G3DSA:1.20.1730.10 8 485 1.5E-71 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily AL543_08730 6ece69229bbe7b3863ad9e8f95ba33f2 155 Gene3D G3DSA:3.40.140.10 34 155 3.1E-44 T 11-10-2018 AL543_08730 6ece69229bbe7b3863ad9e8f95ba33f2 155 Pfam PF04002 RadC-like JAB domain 37 154 2.3E-45 T 11-10-2018 IPR025657 RadC-like JAB domain AL543_08730 6ece69229bbe7b3863ad9e8f95ba33f2 155 SUPERFAMILY SSF102712 51 125 7.06E-6 T 11-10-2018 AL543_08730 6ece69229bbe7b3863ad9e8f95ba33f2 155 TIGRFAM TIGR00608 radc: DNA repair protein RadC 27 155 3.8E-46 T 11-10-2018 IPR001405 Uncharacterised protein family UPF0758 AL543_08730 6ece69229bbe7b3863ad9e8f95ba33f2 155 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 105 110 - T 11-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site AL543_10970 dadda7bbcba239cc0e5ccbb75a844d79 550 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 47 525 42.821 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_10970 dadda7bbcba239cc0e5ccbb75a844d79 550 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 266 279 - T 11-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_10970 dadda7bbcba239cc0e5ccbb75a844d79 550 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 498 515 - T 11-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_10970 dadda7bbcba239cc0e5ccbb75a844d79 550 SUPERFAMILY SSF53697 6 548 1.2E-225 T 11-10-2018 AL543_10970 dadda7bbcba239cc0e5ccbb75a844d79 550 Gene3D G3DSA:3.40.50.10490 13 507 3.5E-243 T 11-10-2018 AL543_10970 dadda7bbcba239cc0e5ccbb75a844d79 550 Pfam PF00342 Phosphoglucose isomerase 53 542 3.4E-254 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_10970 dadda7bbcba239cc0e5ccbb75a844d79 550 Gene3D G3DSA:3.40.50.10490 99 292 3.5E-243 T 11-10-2018 AL543_10970 dadda7bbcba239cc0e5ccbb75a844d79 550 Gene3D G3DSA:1.10.1390.10 508 548 2.7E-20 T 11-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_10970 dadda7bbcba239cc0e5ccbb75a844d79 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 151 170 8.5E-57 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_10970 dadda7bbcba239cc0e5ccbb75a844d79 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 339 360 8.5E-57 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_10970 dadda7bbcba239cc0e5ccbb75a844d79 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 262 280 8.5E-57 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_10970 dadda7bbcba239cc0e5ccbb75a844d79 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 498 511 8.5E-57 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_10970 dadda7bbcba239cc0e5ccbb75a844d79 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 466 484 8.5E-57 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_10970 dadda7bbcba239cc0e5ccbb75a844d79 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 484 498 8.5E-57 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_03800 5f1720344534ff4d7cec7ce6b8974fb7 459 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 59 445 1.2E-142 T 11-10-2018 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 AL543_03800 5f1720344534ff4d7cec7ce6b8974fb7 459 Pfam PF03606 C4-dicarboxylate anaerobic carrier 6 455 3.2E-129 T 11-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 AL543_05835 d1927b5541b421de73fcb68e11cf2e58 448 SUPERFAMILY SSF158791 33 129 1.57E-13 T 11-10-2018 AL543_05835 d1927b5541b421de73fcb68e11cf2e58 448 SMART SM00924 34 137 4.8E-14 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain AL543_05835 d1927b5541b421de73fcb68e11cf2e58 448 Gene3D G3DSA:1.10.357.20 274 447 1.7E-47 T 11-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain AL543_05835 d1927b5541b421de73fcb68e11cf2e58 448 Pfam PF03448 MgtE intracellular N domain 36 135 6.1E-14 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain AL543_05835 d1927b5541b421de73fcb68e11cf2e58 448 SUPERFAMILY SSF54631 137 273 3.66E-14 T 11-10-2018 AL543_05835 d1927b5541b421de73fcb68e11cf2e58 448 SUPERFAMILY SSF161093 276 446 1.96E-47 T 11-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 AL543_05835 d1927b5541b421de73fcb68e11cf2e58 448 Gene3D G3DSA:3.10.580.10 133 258 3.1E-35 T 11-10-2018 AL543_05835 d1927b5541b421de73fcb68e11cf2e58 448 Pfam PF01769 Divalent cation transporter 319 440 3.3E-23 T 11-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AL543_00200 4b3e125885cabfa28fb3c7b8431bcac6 192 SUPERFAMILY SSF49899 19 165 1.58E-7 T 11-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AL543_02465 2821aa5c2f79416ec72daabe2690b874 334 SUPERFAMILY SSF103039 141 329 4.05E-38 T 11-10-2018 IPR028976 CheC-like superfamily AL543_02465 2821aa5c2f79416ec72daabe2690b874 334 SUPERFAMILY SSF52172 3 121 2.42E-28 T 11-10-2018 IPR011006 CheY-like superfamily AL543_02465 2821aa5c2f79416ec72daabe2690b874 334 SMART SM00448 3 115 8.7E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_02465 2821aa5c2f79416ec72daabe2690b874 334 Gene3D G3DSA:3.40.50.2300 1 124 2.6E-27 T 11-10-2018 AL543_02465 2821aa5c2f79416ec72daabe2690b874 334 Pfam PF00072 Response regulator receiver domain 5 114 4.9E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_02465 2821aa5c2f79416ec72daabe2690b874 334 Gene3D G3DSA:3.40.1550.10 139 328 8.0E-30 T 11-10-2018 IPR028976 CheC-like superfamily AL543_10380 035696f26de88ac5306bab22c8d84402 195 Pfam PF04222 Protein of unknown function (DUF416) 6 193 1.1E-77 T 11-10-2018 IPR007338 Protein of unknown function DUF416 AL543_10380 035696f26de88ac5306bab22c8d84402 195 Gene3D G3DSA:1.20.1590.10 3 195 2.4E-65 T 11-10-2018 IPR023381 YP001051499.1-like domain superfamily AL543_03945 caba836f724cca1eee369049466ba6d7 310 Gene3D G3DSA:1.10.10.10 1 90 4.3E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_03945 caba836f724cca1eee369049466ba6d7 310 Gene3D G3DSA:3.40.190.290 91 293 1.7E-57 T 11-10-2018 AL543_03945 caba836f724cca1eee369049466ba6d7 310 SUPERFAMILY SSF46785 4 112 1.81E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_03945 caba836f724cca1eee369049466ba6d7 310 Pfam PF03466 LysR substrate binding domain 88 291 9.3E-43 T 11-10-2018 IPR005119 LysR, substrate-binding AL543_03945 caba836f724cca1eee369049466ba6d7 310 SUPERFAMILY SSF53850 89 293 4.48E-44 T 11-10-2018 AL543_03945 caba836f724cca1eee369049466ba6d7 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.8E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_03945 caba836f724cca1eee369049466ba6d7 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.8E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_03945 caba836f724cca1eee369049466ba6d7 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.8E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_03945 caba836f724cca1eee369049466ba6d7 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 4.3E-20 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_14335 2ad1fa841a6783c6f042a3d9da17173f 431 Gene3D G3DSA:2.40.160.60 26 431 7.6E-106 T 11-10-2018 AL543_14335 2ad1fa841a6783c6f042a3d9da17173f 431 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 17 431 3.4E-118 T 11-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) AL543_14335 2ad1fa841a6783c6f042a3d9da17173f 431 SUPERFAMILY SSF56935 26 431 1.14E-88 T 11-10-2018 AL543_00345 8214194038341b0256f921bd0b197935 314 SMART SM00267 128 308 1.2E-49 T 11-10-2018 IPR000160 GGDEF domain AL543_00345 8214194038341b0256f921bd0b197935 314 Gene3D G3DSA:3.30.70.270 131 308 7.4E-52 T 11-10-2018 AL543_00345 8214194038341b0256f921bd0b197935 314 SUPERFAMILY SSF55073 144 307 1.18E-41 T 11-10-2018 IPR029787 Nucleotide cyclase AL543_00345 8214194038341b0256f921bd0b197935 314 Pfam PF00990 Diguanylate cyclase, GGDEF domain 139 304 3.6E-44 T 11-10-2018 IPR000160 GGDEF domain AL543_00345 8214194038341b0256f921bd0b197935 314 Gene3D G3DSA:3.40.50.2300 3 130 7.5E-30 T 11-10-2018 AL543_00345 8214194038341b0256f921bd0b197935 314 SUPERFAMILY SSF52172 11 132 5.83E-32 T 11-10-2018 IPR011006 CheY-like superfamily AL543_00345 8214194038341b0256f921bd0b197935 314 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 135 306 7.9E-46 T 11-10-2018 IPR000160 GGDEF domain AL543_00345 8214194038341b0256f921bd0b197935 314 SMART SM00448 10 122 7.3E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_00345 8214194038341b0256f921bd0b197935 314 Pfam PF00072 Response regulator receiver domain 12 120 3.8E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_14865 7dc9b60b37f2c712f50a3ba4dd7342b1 350 Hamap MF_01694 Biotin synthase [bioB]. 5 313 41.864 T 11-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AL543_14865 7dc9b60b37f2c712f50a3ba4dd7342b1 350 SMART SM00729 43 255 3.6E-38 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AL543_14865 7dc9b60b37f2c712f50a3ba4dd7342b1 350 Pfam PF04055 Radical SAM superfamily 50 200 4.7E-15 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL543_14865 7dc9b60b37f2c712f50a3ba4dd7342b1 350 TIGRFAM TIGR00433 bioB: biotin synthase 15 310 1.7E-125 T 11-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AL543_14865 7dc9b60b37f2c712f50a3ba4dd7342b1 350 SMART SM00876 220 312 2.3E-46 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AL543_14865 7dc9b60b37f2c712f50a3ba4dd7342b1 350 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 4.4E-20 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AL543_14865 7dc9b60b37f2c712f50a3ba4dd7342b1 350 PIRSF PIRSF001619 1 318 3.5E-137 T 11-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AL543_14865 7dc9b60b37f2c712f50a3ba4dd7342b1 350 Gene3D G3DSA:3.20.20.70 4 315 6.7E-133 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_14865 7dc9b60b37f2c712f50a3ba4dd7342b1 350 SUPERFAMILY SSF102114 5 310 2.75E-92 T 11-10-2018 AL543_09920 27e9ae08037fc56650fc289609103539 571 ProSitePatterns PS00211 ABC transporters family signature. 455 469 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_09920 27e9ae08037fc56650fc289609103539 571 SUPERFAMILY SSF52540 303 553 4.02E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_09920 27e9ae08037fc56650fc289609103539 571 SUPERFAMILY SSF52540 3 253 4.55E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_09920 27e9ae08037fc56650fc289609103539 571 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 271 8.2E-8 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL543_09920 27e9ae08037fc56650fc289609103539 571 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 534 562 0.0014 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL543_09920 27e9ae08037fc56650fc289609103539 571 SMART SM00382 32 231 3.9E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_09920 27e9ae08037fc56650fc289609103539 571 SMART SM00382 338 534 2.0E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_09920 27e9ae08037fc56650fc289609103539 571 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_09920 27e9ae08037fc56650fc289609103539 571 Pfam PF00005 ABC transporter 330 483 9.2E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_09920 27e9ae08037fc56650fc289609103539 571 Gene3D G3DSA:3.40.50.300 1 293 5.0E-86 T 11-10-2018 AL543_09920 27e9ae08037fc56650fc289609103539 571 Gene3D G3DSA:3.40.50.300 300 570 3.9E-86 T 11-10-2018 AL543_09920 27e9ae08037fc56650fc289609103539 571 Pfam PF00005 ABC transporter 24 181 3.6E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_12875 803c069eac2f7d6c7636ea1cc9113516 258 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 3 228 3.5E-114 T 11-10-2018 IPR022488 Polyphosphate kinase-2-related AL543_12875 803c069eac2f7d6c7636ea1cc9113516 258 SUPERFAMILY SSF52540 35 223 9.46E-32 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_12875 803c069eac2f7d6c7636ea1cc9113516 258 Gene3D G3DSA:3.40.50.300 1 241 1.5E-99 T 11-10-2018 AL543_12875 803c069eac2f7d6c7636ea1cc9113516 258 PIRSF PIRSF028756 1 258 1.8E-132 T 11-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 AL543_12875 803c069eac2f7d6c7636ea1cc9113516 258 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 3 229 1.5E-114 T 11-10-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 KEGG: 00190+2.7.4.1 AL543_11365 8aface145dfe871bc50e379407fd4639 323 Gene3D G3DSA:1.10.600.10 1 323 2.0E-121 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily AL543_11365 8aface145dfe871bc50e379407fd4639 323 SUPERFAMILY SSF48576 4 322 4.5E-101 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily AL543_11365 8aface145dfe871bc50e379407fd4639 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site AL543_11365 8aface145dfe871bc50e379407fd4639 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site AL543_11365 8aface145dfe871bc50e379407fd4639 323 Pfam PF00348 Polyprenyl synthetase 32 273 5.6E-75 T 11-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 AL543_02815 899d7504073fd745293cf9d07a66bd78 918 Pfam PF05547 Immune inhibitor A peptidase M6 105 747 5.1E-301 T 11-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 AL543_02815 899d7504073fd745293cf9d07a66bd78 918 Pfam PF00801 PKD domain 844 911 9.1E-9 T 11-10-2018 IPR000601 PKD domain AL543_02815 899d7504073fd745293cf9d07a66bd78 918 Pfam PF00801 PKD domain 772 827 5.6E-12 T 11-10-2018 IPR000601 PKD domain AL543_02815 899d7504073fd745293cf9d07a66bd78 918 SUPERFAMILY SSF49299 838 916 6.02E-10 T 11-10-2018 IPR035986 PKD domain superfamily AL543_02815 899d7504073fd745293cf9d07a66bd78 918 SUPERFAMILY SSF55486 211 385 2.78E-19 T 11-10-2018 AL543_02815 899d7504073fd745293cf9d07a66bd78 918 Gene3D G3DSA:2.60.40.10 839 918 4.2E-8 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL543_02815 899d7504073fd745293cf9d07a66bd78 918 Gene3D G3DSA:2.60.40.10 753 838 4.1E-36 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL543_02815 899d7504073fd745293cf9d07a66bd78 918 SUPERFAMILY SSF49299 756 838 3.27E-22 T 11-10-2018 IPR035986 PKD domain superfamily AL543_02815 899d7504073fd745293cf9d07a66bd78 918 SMART SM00089 760 838 1.6E-23 T 11-10-2018 IPR022409 PKD/Chitinase domain AL543_02815 899d7504073fd745293cf9d07a66bd78 918 SMART SM00089 841 917 2.8E-10 T 11-10-2018 IPR022409 PKD/Chitinase domain AL543_02815 899d7504073fd745293cf9d07a66bd78 918 PIRSF PIRSF007519 1 767 0.0 T 11-10-2018 IPR012300 Peptidase M6, InhA AL543_02815 899d7504073fd745293cf9d07a66bd78 918 TIGRFAM TIGR03296 M6dom_TIGR03296: M6 family metalloprotease domain 121 442 4.5E-84 T 11-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 AL543_09455 ec44c642affa0bad021ec655b588dc3b 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 85 4.9E-28 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL543_09455 ec44c642affa0bad021ec655b588dc3b 140 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 134 8.9E-12 T 11-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain AL543_09455 ec44c642affa0bad021ec655b588dc3b 140 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 134 4.0E-42 T 11-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL543_09455 ec44c642affa0bad021ec655b588dc3b 140 SUPERFAMILY SSF51344 5 87 7.06E-24 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL543_09455 ec44c642affa0bad021ec655b588dc3b 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 4 132 20.433 T 11-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL543_09455 ec44c642affa0bad021ec655b588dc3b 140 SUPERFAMILY SSF46604 89 138 3.66E-14 T 11-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL543_09455 ec44c642affa0bad021ec655b588dc3b 140 Gene3D G3DSA:2.60.15.10 4 91 1.4E-30 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL543_09455 ec44c642affa0bad021ec655b588dc3b 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 11 91 2.0E-40 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL543_09455 ec44c642affa0bad021ec655b588dc3b 140 Gene3D G3DSA:1.20.5.440 92 135 5.0E-19 T 11-10-2018 AL543_14545 1861e310e9478065683c1dad03c88b01 497 Gene3D G3DSA:3.30.300.30 393 495 5.7E-18 T 11-10-2018 AL543_14545 1861e310e9478065683c1dad03c88b01 497 Pfam PF13193 AMP-binding enzyme C-terminal domain 407 482 2.8E-7 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL543_14545 1861e310e9478065683c1dad03c88b01 497 Pfam PF00501 AMP-binding enzyme 11 398 1.2E-52 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AL543_14545 1861e310e9478065683c1dad03c88b01 497 SUPERFAMILY SSF56801 3 490 1.7E-88 T 11-10-2018 AL543_14545 1861e310e9478065683c1dad03c88b01 497 ProSitePatterns PS00455 Putative AMP-binding domain signature. 142 153 - T 11-10-2018 IPR020845 AMP-binding, conserved site AL543_14545 1861e310e9478065683c1dad03c88b01 497 Gene3D G3DSA:3.40.50.12780 1 392 7.5E-66 T 11-10-2018 AL543_16540 ee260840a0f5709c7e0ada0bd575f58d 222 Gene3D G3DSA:1.10.10.10 154 218 1.1E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_16540 ee260840a0f5709c7e0ada0bd575f58d 222 SMART SM00421 154 211 1.2E-20 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_16540 ee260840a0f5709c7e0ada0bd575f58d 222 SUPERFAMILY SSF52172 2 183 4.02E-24 T 11-10-2018 IPR011006 CheY-like superfamily AL543_16540 ee260840a0f5709c7e0ada0bd575f58d 222 Pfam PF00196 Bacterial regulatory proteins, luxR family 156 209 4.1E-21 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_16540 ee260840a0f5709c7e0ada0bd575f58d 222 SMART SM00448 2 116 3.0E-17 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_16540 ee260840a0f5709c7e0ada0bd575f58d 222 Pfam PF00072 Response regulator receiver domain 5 115 1.3E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_16540 ee260840a0f5709c7e0ada0bd575f58d 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 187 4.8E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_16540 ee260840a0f5709c7e0ada0bd575f58d 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 187 199 4.8E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_16540 ee260840a0f5709c7e0ada0bd575f58d 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 171 4.8E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_16540 ee260840a0f5709c7e0ada0bd575f58d 222 ProSitePatterns PS00622 LuxR-type HTH domain signature. 171 198 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_16540 ee260840a0f5709c7e0ada0bd575f58d 222 Gene3D G3DSA:3.40.50.2300 3 129 1.3E-25 T 11-10-2018 AL543_16045 48c4fa2eb286bd4e6f961cb030034dbd 868 PRINTS PR00415 Aconitase family signature 195 208 1.4E-25 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AL543_16045 48c4fa2eb286bd4e6f961cb030034dbd 868 PRINTS PR00415 Aconitase family signature 411 422 1.4E-25 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AL543_16045 48c4fa2eb286bd4e6f961cb030034dbd 868 PRINTS PR00415 Aconitase family signature 142 155 1.4E-25 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AL543_16045 48c4fa2eb286bd4e6f961cb030034dbd 868 PRINTS PR00415 Aconitase family signature 166 174 1.4E-25 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AL543_16045 48c4fa2eb286bd4e6f961cb030034dbd 868 PRINTS PR00415 Aconitase family signature 271 284 1.4E-25 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AL543_16045 48c4fa2eb286bd4e6f961cb030034dbd 868 PRINTS PR00415 Aconitase family signature 285 298 1.4E-25 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AL543_16045 48c4fa2eb286bd4e6f961cb030034dbd 868 PRINTS PR00415 Aconitase family signature 473 486 1.4E-25 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AL543_16045 48c4fa2eb286bd4e6f961cb030034dbd 868 PRINTS PR00415 Aconitase family signature 209 224 1.4E-25 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AL543_16045 48c4fa2eb286bd4e6f961cb030034dbd 868 PRINTS PR00415 Aconitase family signature 364 378 1.4E-25 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AL543_16045 48c4fa2eb286bd4e6f961cb030034dbd 868 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 34 864 9.4E-292 T 11-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 AL543_16045 48c4fa2eb286bd4e6f961cb030034dbd 868 Gene3D G3DSA:3.20.19.10 627 866 1.4E-83 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 AL543_16045 48c4fa2eb286bd4e6f961cb030034dbd 868 SUPERFAMILY SSF53732 27 602 6.54E-187 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 AL543_16045 48c4fa2eb286bd4e6f961cb030034dbd 868 Pfam PF00694 Aconitase C-terminal domain 665 796 8.4E-31 T 11-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 AL543_16045 48c4fa2eb286bd4e6f961cb030034dbd 868 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 2 867 0.0 T 11-10-2018 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 AL543_16045 48c4fa2eb286bd4e6f961cb030034dbd 868 Gene3D G3DSA:3.30.499.20 5 364 2.9E-131 T 11-10-2018 AL543_16045 48c4fa2eb286bd4e6f961cb030034dbd 868 Gene3D G3DSA:1.10.1440.20 571 626 2.6E-9 T 11-10-2018 AL543_16045 48c4fa2eb286bd4e6f961cb030034dbd 868 SUPERFAMILY SSF52016 607 865 5.49E-67 T 11-10-2018 AL543_16045 48c4fa2eb286bd4e6f961cb030034dbd 868 Pfam PF00330 Aconitase family (aconitate hydratase) 74 542 5.8E-148 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AL543_16045 48c4fa2eb286bd4e6f961cb030034dbd 868 Gene3D G3DSA:3.30.499.10 365 570 1.1E-78 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 AL543_02965 dc2d52a7c760d19420325dfcbd3d7d46 215 SMART SM01007 8 182 7.6E-62 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal AL543_02965 dc2d52a7c760d19420325dfcbd3d7d46 215 Hamap MF_00987 L-fuculose phosphate aldolase [fucA]. 1 215 54.615 T 11-10-2018 IPR004782 L-fucose phosphate aldolase GO:0006004|GO:0008270|GO:0008738 KEGG: 00051+4.1.2.17|MetaCyc: PWY-5197 AL543_02965 dc2d52a7c760d19420325dfcbd3d7d46 215 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 182 3.1E-44 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal AL543_02965 dc2d52a7c760d19420325dfcbd3d7d46 215 Gene3D G3DSA:3.40.225.10 1 215 2.2E-73 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily AL543_02965 dc2d52a7c760d19420325dfcbd3d7d46 215 TIGRFAM TIGR01086 fucA: L-fuculose phosphate aldolase 2 215 3.7E-124 T 11-10-2018 IPR004782 L-fucose phosphate aldolase GO:0006004|GO:0008270|GO:0008738 KEGG: 00051+4.1.2.17|MetaCyc: PWY-5197 AL543_02965 dc2d52a7c760d19420325dfcbd3d7d46 215 SUPERFAMILY SSF53639 3 211 1.2E-63 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily AL543_05935 e82ad453e333c5a410bdcb390d27e168 595 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 165 325 2.8E-29 T 11-10-2018 IPR000160 GGDEF domain AL543_05935 e82ad453e333c5a410bdcb390d27e168 595 SMART SM00052 337 582 1.7E-107 T 11-10-2018 IPR001633 EAL domain AL543_05935 e82ad453e333c5a410bdcb390d27e168 595 Gene3D G3DSA:3.20.20.450 339 593 9.6E-97 T 11-10-2018 IPR035919 EAL domain superfamily AL543_05935 e82ad453e333c5a410bdcb390d27e168 595 Gene3D G3DSA:3.30.70.270 162 338 3.9E-43 T 11-10-2018 AL543_05935 e82ad453e333c5a410bdcb390d27e168 595 Pfam PF00563 EAL domain 343 577 1.7E-69 T 11-10-2018 IPR001633 EAL domain AL543_05935 e82ad453e333c5a410bdcb390d27e168 595 SUPERFAMILY SSF141868 342 589 1.07E-89 T 11-10-2018 IPR035919 EAL domain superfamily AL543_05935 e82ad453e333c5a410bdcb390d27e168 595 Pfam PF00990 Diguanylate cyclase, GGDEF domain 168 322 6.2E-34 T 11-10-2018 IPR000160 GGDEF domain AL543_05935 e82ad453e333c5a410bdcb390d27e168 595 SMART SM00267 156 327 2.0E-32 T 11-10-2018 IPR000160 GGDEF domain AL543_05935 e82ad453e333c5a410bdcb390d27e168 595 SUPERFAMILY SSF55073 172 329 8.63E-36 T 11-10-2018 IPR029787 Nucleotide cyclase AL543_12245 121afa16f8b113572de23c2da3bbd45e 113 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 113 35.601 T 11-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 AL543_12245 121afa16f8b113572de23c2da3bbd45e 113 Pfam PF01521 Iron-sulphur cluster biosynthesis 8 108 2.9E-19 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AL543_12245 121afa16f8b113572de23c2da3bbd45e 113 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 9 113 2.6E-37 T 11-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 AL543_12245 121afa16f8b113572de23c2da3bbd45e 113 SUPERFAMILY SSF89360 7 99 4.12E-30 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AL543_12245 121afa16f8b113572de23c2da3bbd45e 113 Gene3D G3DSA:2.60.300.12 8 113 1.9E-32 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AL543_12245 121afa16f8b113572de23c2da3bbd45e 113 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 94 111 - T 11-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 AL543_03255 f2445e1fd097f19941125eeeb4c526ca 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.2E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_03255 f2445e1fd097f19941125eeeb4c526ca 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.2E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_03255 f2445e1fd097f19941125eeeb4c526ca 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.2E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_03255 f2445e1fd097f19941125eeeb4c526ca 299 SUPERFAMILY SSF46785 1 87 2.1E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_03255 f2445e1fd097f19941125eeeb4c526ca 299 Gene3D G3DSA:3.40.190.290 91 295 8.0E-29 T 11-10-2018 AL543_03255 f2445e1fd097f19941125eeeb4c526ca 299 Pfam PF03466 LysR substrate binding domain 87 290 2.0E-25 T 11-10-2018 IPR005119 LysR, substrate-binding AL543_03255 f2445e1fd097f19941125eeeb4c526ca 299 SUPERFAMILY SSF53850 88 293 7.42E-27 T 11-10-2018 AL543_03255 f2445e1fd097f19941125eeeb4c526ca 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.0E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_03255 f2445e1fd097f19941125eeeb4c526ca 299 Gene3D G3DSA:1.10.10.10 1 84 3.9E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_03700 5a84c5b4e2b2e9c6ab236509d95758ac 177 Pfam PF07811 TadE-like protein 8 49 2.2E-5 T 11-10-2018 IPR012495 TadE-like AL543_10685 25c29602bc00172f857e4fc0e04c92a4 142 Gene3D G3DSA:3.30.1550.10 2 69 1.8E-34 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily AL543_10685 25c29602bc00172f857e4fc0e04c92a4 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 1.0E-15 T 11-10-2018 AL543_10685 25c29602bc00172f857e4fc0e04c92a4 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 1.7E-63 T 11-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_10685 25c29602bc00172f857e4fc0e04c92a4 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.507 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 AL543_10685 25c29602bc00172f857e4fc0e04c92a4 142 SUPERFAMILY SSF46906 68 141 3.4E-24 T 11-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily AL543_10685 25c29602bc00172f857e4fc0e04c92a4 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 3.2E-29 T 11-10-2018 IPR020784 Ribosomal protein L11, N-terminal AL543_10685 25c29602bc00172f857e4fc0e04c92a4 142 Gene3D G3DSA:1.10.10.250 70 142 8.4E-25 T 11-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily AL543_10685 25c29602bc00172f857e4fc0e04c92a4 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 11-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_10685 25c29602bc00172f857e4fc0e04c92a4 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 2.7E-22 T 11-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 AL543_10685 25c29602bc00172f857e4fc0e04c92a4 142 SMART SM00649 9 141 6.6E-81 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 AL543_10685 25c29602bc00172f857e4fc0e04c92a4 142 SUPERFAMILY SSF54747 3 73 1.11E-29 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily AL543_01470 4f8d5b52703e5af14f393cbbce6e22b7 151 SUPERFAMILY SSF110087 3 141 3.53E-45 T 11-10-2018 IPR036182 Copper chaperone PCuAC superfamily AL543_01470 4f8d5b52703e5af14f393cbbce6e22b7 151 Pfam PF04314 Copper chaperone PCu(A)C 27 131 3.3E-34 T 11-10-2018 IPR007410 Copper chaperone PCuAC AL543_01470 4f8d5b52703e5af14f393cbbce6e22b7 151 Gene3D G3DSA:2.60.40.1890 29 144 4.8E-36 T 11-10-2018 IPR036182 Copper chaperone PCuAC superfamily AL543_12840 bc0bac34008c641644a06dfe440ecf0d 326 Pfam PF12849 PBP superfamily domain 36 292 2.6E-31 T 11-10-2018 IPR024370 PBP domain AL543_12840 bc0bac34008c641644a06dfe440ecf0d 326 SUPERFAMILY SSF53850 35 317 2.34E-66 T 11-10-2018 AL543_12840 bc0bac34008c641644a06dfe440ecf0d 326 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 15 305 2.8E-74 T 11-10-2018 IPR011862 Phosphate binding protein GO:0042301 AL543_12840 bc0bac34008c641644a06dfe440ecf0d 326 Gene3D G3DSA:3.40.190.10 37 308 3.6E-100 T 11-10-2018 AL543_12840 bc0bac34008c641644a06dfe440ecf0d 326 Gene3D G3DSA:3.40.190.10 122 264 3.6E-100 T 11-10-2018 AL543_16470 9ec7f2a994bc04773a444904f3d92cfd 389 SUPERFAMILY SSF56645 14 201 1.83E-30 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AL543_16470 9ec7f2a994bc04773a444904f3d92cfd 389 SUPERFAMILY SSF47203 232 382 1.77E-15 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AL543_16470 9ec7f2a994bc04773a444904f3d92cfd 389 PIRSF PIRSF016578 1 389 1.8E-135 T 11-10-2018 AL543_16470 9ec7f2a994bc04773a444904f3d92cfd 389 Gene3D G3DSA:1.10.540.10 1 109 3.7E-28 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AL543_16470 9ec7f2a994bc04773a444904f3d92cfd 389 Gene3D G3DSA:1.20.140.10 205 389 4.1E-47 T 11-10-2018 AL543_16470 9ec7f2a994bc04773a444904f3d92cfd 389 Gene3D G3DSA:2.40.110.10 110 203 1.5E-27 T 11-10-2018 AL543_16470 9ec7f2a994bc04773a444904f3d92cfd 389 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 235 367 6.8E-41 T 11-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain AL543_02730 1194fd4ace8f7a6382704fa5dae1be82 543 SUPERFAMILY SSF69255 248 339 4.45E-10 T 11-10-2018 AL543_17445 ccf40b8971981d938de91986d0140218 133 Gene3D G3DSA:3.10.450.40 68 123 1.7E-5 T 11-10-2018 AL543_03385 ed270ec21f32fe21ee12d2480da24a3f 99 Pfam PF01541 GIY-YIG catalytic domain 9 80 2.0E-13 T 11-10-2018 IPR000305 GIY-YIG endonuclease AL543_03385 ed270ec21f32fe21ee12d2480da24a3f 99 Gene3D G3DSA:3.40.1440.10 5 97 4.1E-27 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 AL543_03385 ed270ec21f32fe21ee12d2480da24a3f 99 SUPERFAMILY SSF82771 9 78 6.67E-11 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 AL543_14190 45e733372d7ae1db317241d9cd749b6c 348 Pfam PF03116 NQR2, RnfD, RnfE family 6 347 1.7E-108 T 11-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 AL543_14190 45e733372d7ae1db317241d9cd749b6c 348 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 348 1.2E-146 T 11-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 AL543_14190 45e733372d7ae1db317241d9cd749b6c 348 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 3 348 27.464 T 11-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 AL543_13770 02f1113577611272c645a1e1c8733654 447 Gene3D G3DSA:3.40.50.12780 39 349 1.3E-70 T 11-10-2018 AL543_13770 02f1113577611272c645a1e1c8733654 447 SUPERFAMILY SSF56801 110 438 6.67E-20 T 11-10-2018 AL543_13770 02f1113577611272c645a1e1c8733654 447 Pfam PF00501 AMP-binding enzyme 28 275 3.3E-8 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AL543_07200 b20209aef8c83b633b4b59fe55eaf409 102 Gene3D G3DSA:1.10.20.30 1 47 5.4E-20 T 11-10-2018 AL543_07200 b20209aef8c83b633b4b59fe55eaf409 102 SUPERFAMILY SSF102829 6 95 1.57E-24 T 11-10-2018 IPR036192 Cell division protein ZapA-like superfamily AL543_07200 b20209aef8c83b633b4b59fe55eaf409 102 Pfam PF05164 Cell division protein ZapA 6 89 3.7E-20 T 11-10-2018 IPR007838 Cell division protein ZapA-like AL543_12645 84b2449ca53c5434283980b2a4e5d610 391 Gene3D G3DSA:1.20.59.10 2 110 1.0E-31 T 11-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL543_12645 84b2449ca53c5434283980b2a4e5d610 391 Gene3D G3DSA:3.40.190.10 192 277 1.0E-53 T 11-10-2018 AL543_12645 84b2449ca53c5434283980b2a4e5d610 391 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 8 91 9.3E-27 T 11-10-2018 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 AL543_12645 84b2449ca53c5434283980b2a4e5d610 391 SUPERFAMILY SSF55021 283 380 5.55E-27 T 11-10-2018 AL543_12645 84b2449ca53c5434283980b2a4e5d610 391 Pfam PF00800 Prephenate dehydratase 109 290 2.1E-58 T 11-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AL543_12645 84b2449ca53c5434283980b2a4e5d610 391 PIRSF PIRSF001500 1 383 1.7E-145 T 11-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AL543_12645 84b2449ca53c5434283980b2a4e5d610 391 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 328 335 - T 11-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AL543_12645 84b2449ca53c5434283980b2a4e5d610 391 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 264 286 - T 11-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AL543_12645 84b2449ca53c5434283980b2a4e5d610 391 SUPERFAMILY SSF53850 108 294 3.15E-55 T 11-10-2018 AL543_12645 84b2449ca53c5434283980b2a4e5d610 391 SMART SM00830 12 93 1.7E-23 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL543_12645 84b2449ca53c5434283980b2a4e5d610 391 Pfam PF01817 Chorismate mutase type II 12 91 6.9E-18 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL543_12645 84b2449ca53c5434283980b2a4e5d610 391 Gene3D G3DSA:3.30.70.260 295 382 1.1E-25 T 11-10-2018 AL543_12645 84b2449ca53c5434283980b2a4e5d610 391 Gene3D G3DSA:3.40.190.10 111 284 1.0E-53 T 11-10-2018 AL543_12645 84b2449ca53c5434283980b2a4e5d610 391 SUPERFAMILY SSF48600 7 95 3.48E-20 T 11-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL543_01925 5d331e70c04701c270b5c13b293cf1b7 313 Pfam PF03466 LysR substrate binding domain 103 277 6.4E-10 T 11-10-2018 IPR005119 LysR, substrate-binding AL543_01925 5d331e70c04701c270b5c13b293cf1b7 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 18 74 1.3E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_01925 5d331e70c04701c270b5c13b293cf1b7 313 Gene3D G3DSA:1.10.10.10 8 94 3.2E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_01925 5d331e70c04701c270b5c13b293cf1b7 313 SUPERFAMILY SSF46785 11 91 3.78E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_01925 5d331e70c04701c270b5c13b293cf1b7 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 62 1.3E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_01925 5d331e70c04701c270b5c13b293cf1b7 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 41 1.3E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_01925 5d331e70c04701c270b5c13b293cf1b7 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 51 1.3E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_01925 5d331e70c04701c270b5c13b293cf1b7 313 Gene3D G3DSA:3.40.190.10 95 190 1.5E-5 T 11-10-2018 AL543_01925 5d331e70c04701c270b5c13b293cf1b7 313 SUPERFAMILY SSF53850 103 289 1.39E-15 T 11-10-2018 AL543_06065 5fb3c4247e4ca701b7e95f092cf3d81a 973 Pfam PF01336 OB-fold nucleic acid binding domain 813 885 1.0E-8 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AL543_06065 5fb3c4247e4ca701b7e95f092cf3d81a 973 Gene3D G3DSA:2.40.50.140 800 886 6.4E-7 T 11-10-2018 AL543_06065 5fb3c4247e4ca701b7e95f092cf3d81a 973 Pfam PF14579 Helix-hairpin-helix motif 622 711 9.8E-26 T 11-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL543_06065 5fb3c4247e4ca701b7e95f092cf3d81a 973 Gene3D G3DSA:1.10.150.870 589 700 3.4E-5 T 11-10-2018 AL543_06065 5fb3c4247e4ca701b7e95f092cf3d81a 973 Gene3D G3DSA:1.10.10.1600 247 324 6.6E-31 T 11-10-2018 AL543_06065 5fb3c4247e4ca701b7e95f092cf3d81a 973 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 1 844 0.0 T 11-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL543_06065 5fb3c4247e4ca701b7e95f092cf3d81a 973 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 106 549 9.0E-173 T 11-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL543_06065 5fb3c4247e4ca701b7e95f092cf3d81a 973 Gene3D G3DSA:3.20.20.140 1 84 3.4E-25 T 11-10-2018 AL543_04615 abaa62f1a0c0b3824b1c5c9a22edcb17 240 Gene3D G3DSA:3.20.20.70 6 234 2.3E-77 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_04615 abaa62f1a0c0b3824b1c5c9a22edcb17 240 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 41 231 2.6E-89 T 11-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 AL543_04615 abaa62f1a0c0b3824b1c5c9a22edcb17 240 SUPERFAMILY SSF51366 19 229 6.83E-49 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AL543_04615 abaa62f1a0c0b3824b1c5c9a22edcb17 240 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 17 231 35.517 T 11-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 AL543_19875 01cfa87d5af1d51c0794d2f904af1904 361 Gene3D G3DSA:3.60.150.10 1 361 3.0E-162 T 11-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AL543_19875 01cfa87d5af1d51c0794d2f904af1904 361 PIRSF PIRSF001456 3 360 1.3E-143 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AL543_19875 01cfa87d5af1d51c0794d2f904af1904 361 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 38.085 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AL543_19875 01cfa87d5af1d51c0794d2f904af1904 361 Pfam PF01264 Chorismate synthase 10 345 8.9E-145 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AL543_19875 01cfa87d5af1d51c0794d2f904af1904 361 SUPERFAMILY SSF103263 4 352 8.37E-151 T 11-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AL543_19875 01cfa87d5af1d51c0794d2f904af1904 361 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AL543_19875 01cfa87d5af1d51c0794d2f904af1904 361 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 6.4E-144 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AL543_19875 01cfa87d5af1d51c0794d2f904af1904 361 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AL543_19875 01cfa87d5af1d51c0794d2f904af1904 361 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AL543_05890 e7e2b237bc95063edf38a27003e8e0cd 659 SUPERFAMILY SSF56801 37 635 1.11E-119 T 11-10-2018 AL543_05890 e7e2b237bc95063edf38a27003e8e0cd 659 Gene3D G3DSA:3.40.50.12780 78 531 1.3E-53 T 11-10-2018 AL543_05890 e7e2b237bc95063edf38a27003e8e0cd 659 ProSitePatterns PS00455 Putative AMP-binding domain signature. 280 291 - T 11-10-2018 IPR020845 AMP-binding, conserved site AL543_05890 e7e2b237bc95063edf38a27003e8e0cd 659 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 6 650 5.0E-233 T 11-10-2018 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16|Reactome: R-HSA-77111 AL543_05890 e7e2b237bc95063edf38a27003e8e0cd 659 Pfam PF13193 AMP-binding enzyme C-terminal domain 549 623 5.6E-6 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL543_05890 e7e2b237bc95063edf38a27003e8e0cd 659 Pfam PF00501 AMP-binding enzyme 107 535 2.7E-39 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AL543_05890 e7e2b237bc95063edf38a27003e8e0cd 659 Gene3D G3DSA:3.30.300.30 534 655 2.4E-16 T 11-10-2018 AL543_12675 d49909d6dbda132e3eb4057fee0be82c 857 Gene3D G3DSA:3.40.50.300 348 544 4.2E-66 T 11-10-2018 AL543_12675 d49909d6dbda132e3eb4057fee0be82c 857 SMART SM01086 766 855 3.0E-37 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AL543_12675 d49909d6dbda132e3eb4057fee0be82c 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 AL543_12675 d49909d6dbda132e3eb4057fee0be82c 857 SUPERFAMILY SSF52540 546 848 3.12E-84 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_12675 d49909d6dbda132e3eb4057fee0be82c 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 4.6E-13 T 11-10-2018 IPR004176 Clp, N-terminal AL543_12675 d49909d6dbda132e3eb4057fee0be82c 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 2.4E-13 T 11-10-2018 IPR004176 Clp, N-terminal AL543_12675 d49909d6dbda132e3eb4057fee0be82c 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 AL543_12675 d49909d6dbda132e3eb4057fee0be82c 857 SUPERFAMILY SSF52540 159 545 8.19E-101 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_12675 d49909d6dbda132e3eb4057fee0be82c 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 335 2.8E-13 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL543_12675 d49909d6dbda132e3eb4057fee0be82c 857 Gene3D G3DSA:1.10.8.60 766 857 8.6E-27 T 11-10-2018 AL543_12675 d49909d6dbda132e3eb4057fee0be82c 857 SMART SM00382 198 344 1.4E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_12675 d49909d6dbda132e3eb4057fee0be82c 857 SMART SM00382 597 748 3.7E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_12675 d49909d6dbda132e3eb4057fee0be82c 857 SUPERFAMILY SSF81923 4 156 9.81E-42 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AL543_12675 d49909d6dbda132e3eb4057fee0be82c 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 853 0.0 T 11-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 AL543_12675 d49909d6dbda132e3eb4057fee0be82c 857 Gene3D G3DSA:3.40.50.300 158 347 3.6E-75 T 11-10-2018 AL543_12675 d49909d6dbda132e3eb4057fee0be82c 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 4.3E-42 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AL543_12675 d49909d6dbda132e3eb4057fee0be82c 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 4.3E-42 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AL543_12675 d49909d6dbda132e3eb4057fee0be82c 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 4.3E-42 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AL543_12675 d49909d6dbda132e3eb4057fee0be82c 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 4.3E-42 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AL543_12675 d49909d6dbda132e3eb4057fee0be82c 857 Gene3D G3DSA:3.40.50.300 550 764 5.4E-90 T 11-10-2018 AL543_12675 d49909d6dbda132e3eb4057fee0be82c 857 Gene3D G3DSA:1.10.1780.10 1 148 1.5E-32 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AL543_12675 d49909d6dbda132e3eb4057fee0be82c 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 759 3.7E-57 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL543_12675 d49909d6dbda132e3eb4057fee0be82c 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 843 1.5E-27 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AL543_09885 12fcf03e28a5a56070cd4c918bed486d 135 PRINTS PR00607 Class IE cytochrome C signature 78 88 6.1E-16 T 11-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 AL543_09885 12fcf03e28a5a56070cd4c918bed486d 135 PRINTS PR00607 Class IE cytochrome C signature 121 132 6.1E-16 T 11-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 AL543_09885 12fcf03e28a5a56070cd4c918bed486d 135 PRINTS PR00607 Class IE cytochrome C signature 106 118 6.1E-16 T 11-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 AL543_09885 12fcf03e28a5a56070cd4c918bed486d 135 PRINTS PR00607 Class IE cytochrome C signature 67 78 6.1E-16 T 11-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 AL543_09885 12fcf03e28a5a56070cd4c918bed486d 135 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 58 131 2.5E-14 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL543_09885 12fcf03e28a5a56070cd4c918bed486d 135 Gene3D G3DSA:1.10.760.10 57 134 4.6E-31 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL543_09885 12fcf03e28a5a56070cd4c918bed486d 135 SUPERFAMILY SSF46626 57 131 2.63E-18 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL543_15025 a885e355011aa8ae19955cbd922c18c2 755 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 1.4E-12 T 11-10-2018 IPR004176 Clp, N-terminal AL543_15025 a885e355011aa8ae19955cbd922c18c2 755 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 213 326 7.2E-12 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL543_15025 a885e355011aa8ae19955cbd922c18c2 755 SUPERFAMILY SSF81923 1 142 3.66E-59 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AL543_15025 a885e355011aa8ae19955cbd922c18c2 755 Pfam PF07724 AAA domain (Cdc48 subfamily) 488 648 3.9E-47 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL543_15025 a885e355011aa8ae19955cbd922c18c2 755 SMART SM00382 208 353 3.6E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_15025 a885e355011aa8ae19955cbd922c18c2 755 SMART SM00382 489 656 7.2E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_15025 a885e355011aa8ae19955cbd922c18c2 755 SUPERFAMILY SSF52540 439 743 2.28E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_15025 a885e355011aa8ae19955cbd922c18c2 755 Gene3D G3DSA:1.10.8.60 353 440 8.3E-35 T 11-10-2018 AL543_15025 a885e355011aa8ae19955cbd922c18c2 755 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 655 735 8.0E-25 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AL543_15025 a885e355011aa8ae19955cbd922c18c2 755 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 520 538 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 AL543_15025 a885e355011aa8ae19955cbd922c18c2 755 Gene3D G3DSA:3.40.50.300 441 654 8.9E-75 T 11-10-2018 AL543_15025 a885e355011aa8ae19955cbd922c18c2 755 SMART SM01086 655 744 5.5E-37 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AL543_15025 a885e355011aa8ae19955cbd922c18c2 755 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 597 611 4.6E-36 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AL543_15025 a885e355011aa8ae19955cbd922c18c2 755 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 493 511 4.6E-36 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AL543_15025 a885e355011aa8ae19955cbd922c18c2 755 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 535 553 4.6E-36 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AL543_15025 a885e355011aa8ae19955cbd922c18c2 755 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 564 582 4.6E-36 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AL543_15025 a885e355011aa8ae19955cbd922c18c2 755 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 736 0.0 T 11-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 AL543_15025 a885e355011aa8ae19955cbd922c18c2 755 Gene3D G3DSA:1.10.8.60 655 754 2.1E-30 T 11-10-2018 AL543_15025 a885e355011aa8ae19955cbd922c18c2 755 SUPERFAMILY SSF52540 170 425 3.43E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_15025 a885e355011aa8ae19955cbd922c18c2 755 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 304 316 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 AL543_15025 a885e355011aa8ae19955cbd922c18c2 755 Gene3D G3DSA:1.10.1780.10 1 143 5.0E-43 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AL543_15025 a885e355011aa8ae19955cbd922c18c2 755 Gene3D G3DSA:3.40.50.300 159 352 5.1E-63 T 11-10-2018 AL543_15090 a1fea28a871b46c3af5fd9b210a50615 165 Pfam PF00072 Response regulator receiver domain 6 126 1.1E-13 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_15090 a1fea28a871b46c3af5fd9b210a50615 165 SMART SM00448 4 125 5.7E-7 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_15090 a1fea28a871b46c3af5fd9b210a50615 165 SUPERFAMILY SSF52172 1 150 1.07E-19 T 11-10-2018 IPR011006 CheY-like superfamily AL543_15090 a1fea28a871b46c3af5fd9b210a50615 165 Gene3D G3DSA:3.40.50.2300 5 142 2.4E-18 T 11-10-2018 AL543_10715 bc184ac342dc06f01961e9127f4a8e3c 164 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 3 154 6.8E-56 T 11-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 AL543_10715 bc184ac342dc06f01961e9127f4a8e3c 164 Gene3D G3DSA:1.20.120.1370 1 157 1.5E-52 T 11-10-2018 IPR038309 Rsd/AlgQ superfamily AL543_10715 bc184ac342dc06f01961e9127f4a8e3c 164 PIRSF PIRSF016548 3 164 3.8E-72 T 11-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 AL543_16405 d8f3f389a3162b0f5ab66e0a19942226 432 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 19 428 1.2E-95 T 11-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 AL543_16405 d8f3f389a3162b0f5ab66e0a19942226 432 PIRSF PIRSF006066 2 432 5.3E-97 T 11-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 AL543_16405 d8f3f389a3162b0f5ab66e0a19942226 432 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 423 1.4E-93 T 11-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AL543_11575 5de6ce2431fdb48af1002f86eaf03e80 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 187 39.203 T 11-10-2018 IPR003774 Protein of unknown function UPF0301 AL543_11575 5de6ce2431fdb48af1002f86eaf03e80 187 Pfam PF02622 Uncharacterized ACR, COG1678 12 174 2.2E-51 T 11-10-2018 IPR003774 Protein of unknown function UPF0301 AL543_11575 5de6ce2431fdb48af1002f86eaf03e80 187 Gene3D G3DSA:3.40.1740.10 1 187 2.9E-70 T 11-10-2018 AL543_11575 5de6ce2431fdb48af1002f86eaf03e80 187 SUPERFAMILY SSF143456 1 187 2.88E-67 T 11-10-2018 AL543_20425 38ce03ccc4c9ef7cc0e1ebba47588e93 288 Pfam PF01963 TraB family 22 276 3.3E-55 T 11-10-2018 IPR002816 Pheromone shutdown, TraB AL543_03035 97d4cda27dc3dc045fe3490c2158740a 230 SUPERFAMILY SSF54637 84 223 6.06E-29 T 11-10-2018 IPR029069 HotDog domain superfamily AL543_03035 97d4cda27dc3dc045fe3490c2158740a 230 Pfam PF01575 MaoC like domain 86 205 3.9E-20 T 11-10-2018 IPR002539 MaoC-like dehydratase domain AL543_03035 97d4cda27dc3dc045fe3490c2158740a 230 Gene3D G3DSA:3.10.129.10 80 228 2.0E-33 T 11-10-2018 AL543_14120 64c3b08fced1b8c30f7b6887ace4c98f 264 Gene3D G3DSA:3.30.70.660 105 242 5.7E-50 T 11-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 AL543_14120 64c3b08fced1b8c30f7b6887ace4c98f 264 PIRSF PIRSF001430 1 254 1.5E-78 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL543_14120 64c3b08fced1b8c30f7b6887ace4c98f 264 SUPERFAMILY SSF55120 1 256 2.16E-94 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL543_14120 64c3b08fced1b8c30f7b6887ace4c98f 264 Pfam PF01416 tRNA pseudouridine synthase 8 102 1.9E-12 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL543_14120 64c3b08fced1b8c30f7b6887ace4c98f 264 Pfam PF01416 tRNA pseudouridine synthase 144 244 8.5E-29 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL543_14120 64c3b08fced1b8c30f7b6887ace4c98f 264 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 238 2.3E-77 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL543_14120 64c3b08fced1b8c30f7b6887ace4c98f 264 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 243 35.775 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL543_14120 64c3b08fced1b8c30f7b6887ace4c98f 264 Gene3D G3DSA:3.30.70.580 1 104 2.3E-40 T 11-10-2018 AL543_16330 95c381683304413fc9bb58a52f12e827 562 SUPERFAMILY SSF58104 253 560 5.36E-67 T 11-10-2018 AL543_16330 95c381683304413fc9bb58a52f12e827 562 Gene3D G3DSA:1.10.287.950 232 562 1.2E-67 T 11-10-2018 AL543_16330 95c381683304413fc9bb58a52f12e827 562 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 398 425 2.8E-26 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL543_16330 95c381683304413fc9bb58a52f12e827 562 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 321 350 2.8E-26 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL543_16330 95c381683304413fc9bb58a52f12e827 562 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 427 456 2.8E-26 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL543_16330 95c381683304413fc9bb58a52f12e827 562 SMART SM00304 233 285 2.6E-9 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_16330 95c381683304413fc9bb58a52f12e827 562 Pfam PF00672 HAMP domain 235 280 5.6E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_16330 95c381683304413fc9bb58a52f12e827 562 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 374 526 3.9E-39 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_16330 95c381683304413fc9bb58a52f12e827 562 SMART SM00283 300 561 3.1E-57 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_19575 3e53188c2ea8461865d9d038491c4a73 184 Gene3D G3DSA:3.40.30.10 20 184 6.7E-46 T 11-10-2018 AL543_19575 3e53188c2ea8461865d9d038491c4a73 184 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 6 177 1.3E-73 T 11-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 AL543_19575 3e53188c2ea8461865d9d038491c4a73 184 ProSitePatterns PS00194 Thioredoxin family active site. 71 89 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AL543_19575 3e53188c2ea8461865d9d038491c4a73 184 SUPERFAMILY SSF52833 46 177 1.24E-38 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL543_19575 3e53188c2ea8461865d9d038491c4a73 184 Pfam PF08534 Redoxin 41 163 1.9E-27 T 11-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AL543_12850 b0d74e9e650870e606d264d7ecad7cff 701 Pfam PF02503 Polyphosphate kinase middle domain 119 320 3.3E-46 T 11-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 AL543_12850 b0d74e9e650870e606d264d7ecad7cff 701 Gene3D G3DSA:3.30.870.10 500 686 8.1E-73 T 11-10-2018 AL543_12850 b0d74e9e650870e606d264d7ecad7cff 701 Gene3D G3DSA:1.20.58.310 9 109 5.5E-37 T 11-10-2018 AL543_12850 b0d74e9e650870e606d264d7ecad7cff 701 Hamap MF_00347 Polyphosphate kinase [ppk]. 4 681 27.261 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AL543_12850 b0d74e9e650870e606d264d7ecad7cff 701 Gene3D G3DSA:3.30.870.10 319 499 8.0E-72 T 11-10-2018 AL543_12850 b0d74e9e650870e606d264d7ecad7cff 701 SUPERFAMILY SSF56024 500 684 3.36E-68 T 11-10-2018 AL543_12850 b0d74e9e650870e606d264d7ecad7cff 701 SUPERFAMILY SSF56024 315 493 1.73E-54 T 11-10-2018 AL543_12850 b0d74e9e650870e606d264d7ecad7cff 701 PIRSF PIRSF015589 1 697 1.2E-253 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AL543_12850 b0d74e9e650870e606d264d7ecad7cff 701 SUPERFAMILY SSF143724 107 313 1.96E-63 T 11-10-2018 AL543_12850 b0d74e9e650870e606d264d7ecad7cff 701 SUPERFAMILY SSF140356 4 104 7.85E-34 T 11-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 AL543_12850 b0d74e9e650870e606d264d7ecad7cff 701 Gene3D G3DSA:3.30.1840.10 110 307 1.1E-74 T 11-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 AL543_12850 b0d74e9e650870e606d264d7ecad7cff 701 Pfam PF13090 Polyphosphate kinase C-terminal domain 331 676 2.7E-144 T 11-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 AL543_12850 b0d74e9e650870e606d264d7ecad7cff 701 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 109 1.2E-31 T 11-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 AL543_12850 b0d74e9e650870e606d264d7ecad7cff 701 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 677 4.9E-265 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AL543_13590 6ff8ce3716e6db96d49bf86a32eaf729 483 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 382 483 6.6E-40 T 11-10-2018 IPR026340 Thiazole biosynthesis domain GO:0052837 KEGG: 00730+2.8.1.4 AL543_13590 6ff8ce3716e6db96d49bf86a32eaf729 483 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 369 1.2E-72 T 11-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 AL543_13590 6ff8ce3716e6db96d49bf86a32eaf729 483 SUPERFAMILY SSF52402 174 372 2.14E-43 T 11-10-2018 AL543_13590 6ff8ce3716e6db96d49bf86a32eaf729 483 Gene3D G3DSA:3.30.2130.30 1 174 2.4E-31 T 11-10-2018 AL543_13590 6ff8ce3716e6db96d49bf86a32eaf729 483 Gene3D G3DSA:3.40.250.10 398 483 2.8E-11 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AL543_13590 6ff8ce3716e6db96d49bf86a32eaf729 483 Gene3D G3DSA:3.40.50.620 175 397 1.2E-51 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL543_13590 6ff8ce3716e6db96d49bf86a32eaf729 483 Pfam PF02926 THUMP domain 55 157 3.3E-21 T 11-10-2018 IPR004114 THUMP domain GO:0003723 AL543_13590 6ff8ce3716e6db96d49bf86a32eaf729 483 SMART SM00981 75 165 2.3E-21 T 11-10-2018 IPR004114 THUMP domain GO:0003723 AL543_13590 6ff8ce3716e6db96d49bf86a32eaf729 483 SUPERFAMILY SSF52821 399 482 1.17E-12 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AL543_13590 6ff8ce3716e6db96d49bf86a32eaf729 483 SUPERFAMILY SSF143437 1 173 8.72E-46 T 11-10-2018 AL543_13590 6ff8ce3716e6db96d49bf86a32eaf729 483 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 483 219.939 T 11-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 AL543_13590 6ff8ce3716e6db96d49bf86a32eaf729 483 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 375 1.7E-110 T 11-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 AL543_19055 816e7af374419e9854215b321319d00c 315 Pfam PF03466 LysR substrate binding domain 90 296 6.5E-47 T 11-10-2018 IPR005119 LysR, substrate-binding AL543_19055 816e7af374419e9854215b321319d00c 315 SUPERFAMILY SSF53850 90 300 1.03E-48 T 11-10-2018 AL543_19055 816e7af374419e9854215b321319d00c 315 Gene3D G3DSA:1.10.10.10 5 91 1.9E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_19055 816e7af374419e9854215b321319d00c 315 Gene3D G3DSA:3.40.190.10 94 293 3.3E-61 T 11-10-2018 AL543_19055 816e7af374419e9854215b321319d00c 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 64 1.4E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_19055 816e7af374419e9854215b321319d00c 315 SUPERFAMILY SSF46785 7 114 7.24E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_19055 816e7af374419e9854215b321319d00c 315 Gene3D G3DSA:3.40.190.10 165 267 3.3E-61 T 11-10-2018 AL543_19380 a52edf9600382be4967eb70ff5e60c7a 244 Gene3D G3DSA:3.40.50.720 1 244 4.3E-93 T 11-10-2018 AL543_19380 a52edf9600382be4967eb70ff5e60c7a 244 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 242 1.1E-102 T 11-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL543_19380 a52edf9600382be4967eb70ff5e60c7a 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 215 1.3E-5 T 11-10-2018 AL543_19380 a52edf9600382be4967eb70ff5e60c7a 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 4.2E-70 T 11-10-2018 AL543_19380 a52edf9600382be4967eb70ff5e60c7a 244 SUPERFAMILY SSF51735 4 243 8.56E-91 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_19380 a52edf9600382be4967eb70ff5e60c7a 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 6.9E-17 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_19380 a52edf9600382be4967eb70ff5e60c7a 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 6.9E-17 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_19380 a52edf9600382be4967eb70ff5e60c7a 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 6.9E-17 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_19380 a52edf9600382be4967eb70ff5e60c7a 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL543_19380 a52edf9600382be4967eb70ff5e60c7a 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 8.3E-53 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_19380 a52edf9600382be4967eb70ff5e60c7a 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 8.3E-53 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_19380 a52edf9600382be4967eb70ff5e60c7a 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 8.3E-53 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_19380 a52edf9600382be4967eb70ff5e60c7a 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 8.3E-53 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_19380 a52edf9600382be4967eb70ff5e60c7a 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 8.3E-53 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_19380 a52edf9600382be4967eb70ff5e60c7a 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 8.3E-53 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_10115 768d70bf1934594dc8328c03888806b1 282 Gene3D G3DSA:1.10.10.10 1 80 1.7E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_10115 768d70bf1934594dc8328c03888806b1 282 Pfam PF01380 SIS domain 130 257 9.7E-18 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL543_10115 768d70bf1934594dc8328c03888806b1 282 Gene3D G3DSA:3.40.50.10490 97 276 7.0E-40 T 11-10-2018 AL543_10115 768d70bf1934594dc8328c03888806b1 282 SUPERFAMILY SSF46689 1 77 4.12E-19 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_10115 768d70bf1934594dc8328c03888806b1 282 SUPERFAMILY SSF53697 99 279 7.86E-37 T 11-10-2018 AL543_10115 768d70bf1934594dc8328c03888806b1 282 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 75 1.4E-21 T 11-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AL543_02495 60767a678905a63fff40084cd61e230e 182 SUPERFAMILY SSF56925 21 182 3.92E-15 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AL543_02495 60767a678905a63fff40084cd61e230e 182 Gene3D G3DSA:2.40.160.20 21 182 3.3E-16 T 11-10-2018 AL543_02495 60767a678905a63fff40084cd61e230e 182 Pfam PF13505 Outer membrane protein beta-barrel domain 13 182 7.8E-10 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel AL543_16145 e153da2192df330716b651ad592164d3 251 Pfam PF00005 ABC transporter 26 174 5.8E-39 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_16145 e153da2192df330716b651ad592164d3 251 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_16145 e153da2192df330716b651ad592164d3 251 Gene3D G3DSA:3.40.50.300 8 251 2.8E-79 T 11-10-2018 AL543_16145 e153da2192df330716b651ad592164d3 251 SMART SM00382 35 222 2.5E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_16145 e153da2192df330716b651ad592164d3 251 SUPERFAMILY SSF52540 10 244 5.07E-82 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_16145 e153da2192df330716b651ad592164d3 251 PIRSF PIRSF039085 7 250 5.6E-112 T 11-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AL543_05735 e813e3dd845c378b83d4acfd71d49576 573 Pfam PF10022 Uncharacterized protein conserved in bacteria (DUF2264) 21 351 1.9E-87 T 11-10-2018 IPR016624 Uncharacterised conserved protein UCP014753 AL543_05735 e813e3dd845c378b83d4acfd71d49576 573 PIRSF PIRSF014753 1 572 1.2E-135 T 11-10-2018 IPR016624 Uncharacterised conserved protein UCP014753 AL543_16875 df307b1e91c2dcf891968b1607c9c5b4 278 Gene3D G3DSA:3.40.140.10 122 275 6.4E-43 T 11-10-2018 AL543_16875 df307b1e91c2dcf891968b1607c9c5b4 278 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 11 267 26.113 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AL543_16875 df307b1e91c2dcf891968b1607c9c5b4 278 Gene3D G3DSA:3.10.20.10 36 119 9.5E-10 T 11-10-2018 AL543_16875 df307b1e91c2dcf891968b1607c9c5b4 278 Pfam PF02634 FdhD/NarQ family 35 266 3.5E-74 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AL543_16875 df307b1e91c2dcf891968b1607c9c5b4 278 SUPERFAMILY SSF53927 15 267 1.23E-72 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AL543_16875 df307b1e91c2dcf891968b1607c9c5b4 278 PIRSF PIRSF015626 1 271 2.1E-104 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AL543_01520 a258a42b21c9f428fa374bbfc184ab35 376 Gene3D G3DSA:1.10.287.470 124 186 1.1E-8 T 11-10-2018 AL543_01520 a258a42b21c9f428fa374bbfc184ab35 376 Pfam PF13533 Biotin-lipoyl like 64 111 3.4E-8 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AL543_01520 a258a42b21c9f428fa374bbfc184ab35 376 Gene3D G3DSA:1.10.287.470 198 219 4.1E-13 T 11-10-2018 AL543_01520 a258a42b21c9f428fa374bbfc184ab35 376 SUPERFAMILY SSF111369 61 114 7.32E-6 T 11-10-2018 AL543_01520 a258a42b21c9f428fa374bbfc184ab35 376 Gene3D G3DSA:2.40.50.100 220 255 4.1E-13 T 11-10-2018 AL543_01520 a258a42b21c9f428fa374bbfc184ab35 376 Gene3D G3DSA:1.10.287.470 97 115 5.8E-8 T 11-10-2018 AL543_01520 a258a42b21c9f428fa374bbfc184ab35 376 Gene3D G3DSA:2.40.30.170 256 342 4.1E-13 T 11-10-2018 AL543_01520 a258a42b21c9f428fa374bbfc184ab35 376 Gene3D G3DSA:2.40.50.100 62 96 5.8E-8 T 11-10-2018 AL543_13965 cceb840ef05a8b4ddaea4cc3d6c6e170 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 11-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site AL543_13965 cceb840ef05a8b4ddaea4cc3d6c6e170 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 4.3E-27 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AL543_13965 cceb840ef05a8b4ddaea4cc3d6c6e170 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 11-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AL543_13965 cceb840ef05a8b4ddaea4cc3d6c6e170 85 SUPERFAMILY SSF55594 1 82 3.01E-26 T 11-10-2018 IPR035895 HPr-like superfamily AL543_13965 cceb840ef05a8b4ddaea4cc3d6c6e170 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 5.0E-28 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AL543_13965 cceb840ef05a8b4ddaea4cc3d6c6e170 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 6.5E-18 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AL543_13965 cceb840ef05a8b4ddaea4cc3d6c6e170 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 6.5E-18 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AL543_13965 cceb840ef05a8b4ddaea4cc3d6c6e170 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 6.5E-18 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AL543_13965 cceb840ef05a8b4ddaea4cc3d6c6e170 85 Gene3D G3DSA:3.30.1340.10 1 85 2.5E-32 T 11-10-2018 IPR035895 HPr-like superfamily AL543_01285 392af061f9e7be0699ea3bdf3f0e49cb 499 SUPERFAMILY SSF56801 3 472 2.49E-82 T 11-10-2018 AL543_01285 392af061f9e7be0699ea3bdf3f0e49cb 499 Gene3D G3DSA:3.40.50.12780 3 370 2.4E-72 T 11-10-2018 AL543_01285 392af061f9e7be0699ea3bdf3f0e49cb 499 Pfam PF00501 AMP-binding enzyme 8 378 2.6E-61 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AL543_01285 392af061f9e7be0699ea3bdf3f0e49cb 499 ProSitePatterns PS00455 Putative AMP-binding domain signature. 142 153 - T 11-10-2018 IPR020845 AMP-binding, conserved site AL543_14970 f8cd99d5d4093f8a26f5986d9fafed08 431 PIRSF PIRSF000099 1 427 1.8E-168 T 11-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL543_14970 f8cd99d5d4093f8a26f5986d9fafed08 431 Gene3D G3DSA:3.40.50.1980 231 346 1.7E-125 T 11-10-2018 AL543_14970 f8cd99d5d4093f8a26f5986d9fafed08 431 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 227 259 - T 11-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 AL543_14970 f8cd99d5d4093f8a26f5986d9fafed08 431 Gene3D G3DSA:3.40.50.1980 32 229 1.7E-125 T 11-10-2018 AL543_14970 f8cd99d5d4093f8a26f5986d9fafed08 431 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 423 1.2E-164 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL543_14970 f8cd99d5d4093f8a26f5986d9fafed08 431 Pfam PF00815 Histidinol dehydrogenase 27 424 1.0E-169 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL543_14970 f8cd99d5d4093f8a26f5986d9fafed08 431 PRINTS PR00083 Histidinol dehydrogenase signature 195 220 2.2E-101 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL543_14970 f8cd99d5d4093f8a26f5986d9fafed08 431 PRINTS PR00083 Histidinol dehydrogenase signature 134 160 2.2E-101 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL543_14970 f8cd99d5d4093f8a26f5986d9fafed08 431 PRINTS PR00083 Histidinol dehydrogenase signature 227 248 2.2E-101 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL543_14970 f8cd99d5d4093f8a26f5986d9fafed08 431 PRINTS PR00083 Histidinol dehydrogenase signature 317 342 2.2E-101 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL543_14970 f8cd99d5d4093f8a26f5986d9fafed08 431 PRINTS PR00083 Histidinol dehydrogenase signature 358 376 2.2E-101 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL543_14970 f8cd99d5d4093f8a26f5986d9fafed08 431 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 2.2E-101 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL543_14970 f8cd99d5d4093f8a26f5986d9fafed08 431 PRINTS PR00083 Histidinol dehydrogenase signature 165 191 2.2E-101 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL543_14970 f8cd99d5d4093f8a26f5986d9fafed08 431 PRINTS PR00083 Histidinol dehydrogenase signature 249 268 2.2E-101 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL543_14970 f8cd99d5d4093f8a26f5986d9fafed08 431 SUPERFAMILY SSF53720 4 424 7.26E-92 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AL543_14970 f8cd99d5d4093f8a26f5986d9fafed08 431 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 4 424 42.029 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL543_19975 3c8b43bafc3a2aa2776e6c951680f268 351 SUPERFAMILY SSF47384 120 191 6.08E-10 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL543_19975 3c8b43bafc3a2aa2776e6c951680f268 351 Gene3D G3DSA:3.30.565.10 193 350 4.8E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_19975 3c8b43bafc3a2aa2776e6c951680f268 351 SMART SM00387 234 340 1.3E-31 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_19975 3c8b43bafc3a2aa2776e6c951680f268 351 SUPERFAMILY SSF55874 180 338 9.17E-37 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_19975 3c8b43bafc3a2aa2776e6c951680f268 351 Pfam PF13188 PAS domain 21 68 3.5E-7 T 11-10-2018 IPR000014 PAS domain AL543_19975 3c8b43bafc3a2aa2776e6c951680f268 351 SUPERFAMILY SSF55785 7 88 5.02E-9 T 11-10-2018 IPR035965 PAS domain superfamily AL543_19975 3c8b43bafc3a2aa2776e6c951680f268 351 SMART SM00091 21 84 6.6E-5 T 11-10-2018 IPR000014 PAS domain AL543_19975 3c8b43bafc3a2aa2776e6c951680f268 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 324 337 1.1E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_19975 3c8b43bafc3a2aa2776e6c951680f268 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 300 318 1.1E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_19975 3c8b43bafc3a2aa2776e6c951680f268 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 271 285 1.1E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_19975 3c8b43bafc3a2aa2776e6c951680f268 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 289 299 1.1E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_19975 3c8b43bafc3a2aa2776e6c951680f268 351 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 236 339 4.6E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_19975 3c8b43bafc3a2aa2776e6c951680f268 351 Pfam PF00512 His Kinase A (phospho-acceptor) domain 125 189 2.7E-10 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_19975 3c8b43bafc3a2aa2776e6c951680f268 351 SMART SM00388 125 191 1.8E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_19975 3c8b43bafc3a2aa2776e6c951680f268 351 Gene3D G3DSA:1.10.287.130 112 188 5.6E-9 T 11-10-2018 AL543_19975 3c8b43bafc3a2aa2776e6c951680f268 351 Gene3D G3DSA:3.30.450.20 11 111 8.9E-7 T 11-10-2018 AL543_03190 034a2abad527cfb63cb59fe924f53614 422 Gene3D G3DSA:3.40.50.300 2 217 4.0E-79 T 11-10-2018 AL543_03190 034a2abad527cfb63cb59fe924f53614 422 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 160 168 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AL543_03190 034a2abad527cfb63cb59fe924f53614 422 SMART SM00487 25 229 1.3E-63 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL543_03190 034a2abad527cfb63cb59fe924f53614 422 Pfam PF00271 Helicase conserved C-terminal domain 240 346 3.5E-27 T 11-10-2018 IPR001650 Helicase, C-terminal AL543_03190 034a2abad527cfb63cb59fe924f53614 422 Gene3D G3DSA:3.40.50.300 221 421 1.5E-47 T 11-10-2018 AL543_03190 034a2abad527cfb63cb59fe924f53614 422 Pfam PF00270 DEAD/DEAH box helicase 30 202 1.5E-52 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL543_03190 034a2abad527cfb63cb59fe924f53614 422 SUPERFAMILY SSF52540 81 367 6.08E-75 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_03190 034a2abad527cfb63cb59fe924f53614 422 SMART SM00490 265 346 1.1E-31 T 11-10-2018 IPR001650 Helicase, C-terminal AL543_00365 486617ca9b7086e92a05ae8bbdb05233 501 PIRSF PIRSF000110 2 490 1.4E-177 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AL543_00365 486617ca9b7086e92a05ae8bbdb05233 501 Gene3D G3DSA:3.30.360.10 181 489 2.8E-124 T 11-10-2018 AL543_00365 486617ca9b7086e92a05ae8bbdb05233 501 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 182 188 - T 11-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AL543_00365 486617ca9b7086e92a05ae8bbdb05233 501 Gene3D G3DSA:3.40.50.720 5 180 2.4E-57 T 11-10-2018 AL543_00365 486617ca9b7086e92a05ae8bbdb05233 501 SUPERFAMILY SSF55347 182 490 5.23E-114 T 11-10-2018 AL543_00365 486617ca9b7086e92a05ae8bbdb05233 501 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 7 488 85.043 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AL543_00365 486617ca9b7086e92a05ae8bbdb05233 501 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 11 192 1.5E-62 T 11-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AL543_00365 486617ca9b7086e92a05ae8bbdb05233 501 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 7 487 2.2E-198 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AL543_00365 486617ca9b7086e92a05ae8bbdb05233 501 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 224 241 2.3E-49 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AL543_00365 486617ca9b7086e92a05ae8bbdb05233 501 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 333 359 2.3E-49 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AL543_00365 486617ca9b7086e92a05ae8bbdb05233 501 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 148 161 2.3E-49 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AL543_00365 486617ca9b7086e92a05ae8bbdb05233 501 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 242 258 2.3E-49 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AL543_00365 486617ca9b7086e92a05ae8bbdb05233 501 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 172 200 2.3E-49 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AL543_00365 486617ca9b7086e92a05ae8bbdb05233 501 SUPERFAMILY SSF51735 4 195 3.94E-60 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_00365 486617ca9b7086e92a05ae8bbdb05233 501 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 194 487 1.7E-114 T 11-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AL543_06850 7b47a9c75e9481af3b101d71c84ffe29 475 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AL543_06850 7b47a9c75e9481af3b101d71c84ffe29 475 SUPERFAMILY SSF51905 1 322 3.89E-59 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_06850 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.6E-41 T 11-10-2018 AL543_06850 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 2.6E-41 T 11-10-2018 AL543_06850 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 2.6E-41 T 11-10-2018 AL543_06850 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 2.6E-41 T 11-10-2018 AL543_06850 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 2.6E-41 T 11-10-2018 AL543_06850 7b47a9c75e9481af3b101d71c84ffe29 475 PIRSF PIRSF000350 1 469 6.4E-83 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 AL543_06850 7b47a9c75e9481af3b101d71c84ffe29 475 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 7.1E-66 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL543_06850 7b47a9c75e9481af3b101d71c84ffe29 475 Gene3D G3DSA:3.50.50.60 150 271 5.7E-126 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_06850 7b47a9c75e9481af3b101d71c84ffe29 475 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 8 460 8.5E-151 T 11-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 AL543_06850 7b47a9c75e9481af3b101d71c84ffe29 475 Gene3D G3DSA:3.30.390.30 346 467 1.3E-44 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AL543_06850 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 3.2E-68 T 11-10-2018 AL543_06850 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 3.2E-68 T 11-10-2018 AL543_06850 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 3.2E-68 T 11-10-2018 AL543_06850 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 3.2E-68 T 11-10-2018 AL543_06850 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 3.2E-68 T 11-10-2018 AL543_06850 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 3.2E-68 T 11-10-2018 AL543_06850 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 3.2E-68 T 11-10-2018 AL543_06850 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 3.2E-68 T 11-10-2018 AL543_06850 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 3.2E-68 T 11-10-2018 AL543_06850 7b47a9c75e9481af3b101d71c84ffe29 475 Gene3D G3DSA:3.50.50.60 9 332 5.7E-126 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_06850 7b47a9c75e9481af3b101d71c84ffe29 475 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 2.7E-35 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AL543_06850 7b47a9c75e9481af3b101d71c84ffe29 475 SUPERFAMILY SSF55424 343 466 6.36E-39 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AL543_02335 f6466c4b566883ec35589407a6e3eab5 160 SUPERFAMILY SSF141523 24 158 5.49E-23 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AL543_02335 f6466c4b566883ec35589407a6e3eab5 160 Pfam PF03734 L,D-transpeptidase catalytic domain 24 158 3.5E-17 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AL543_02335 f6466c4b566883ec35589407a6e3eab5 160 Gene3D G3DSA:2.40.440.10 19 158 1.5E-14 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AL543_00585 ccc886d39a04c0046114014080118eec 299 SUPERFAMILY SSF103481 41 136 8.24E-11 T 11-10-2018 AL543_00585 ccc886d39a04c0046114014080118eec 299 Pfam PF00892 EamA-like transporter family 151 280 9.3E-16 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL543_00585 ccc886d39a04c0046114014080118eec 299 Pfam PF00892 EamA-like transporter family 3 135 1.5E-20 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL543_00585 ccc886d39a04c0046114014080118eec 299 SUPERFAMILY SSF103481 211 283 5.36E-10 T 11-10-2018 AL543_17860 2af7db9e37746fd31b47f36cc31af019 204 Pfam PF01810 LysE type translocator 27 197 1.4E-13 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL543_06755 71326ca90a40847fd936b71996ca701f 903 SMART SM00957 6 403 0.0 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 AL543_06755 71326ca90a40847fd936b71996ca701f 903 Pfam PF01043 SecA preprotein cross-linking domain 232 359 1.0E-38 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 AL543_06755 71326ca90a40847fd936b71996ca701f 903 Pfam PF02810 SEC-C motif 883 901 2.0E-10 T 11-10-2018 IPR004027 SEC-C motif AL543_06755 71326ca90a40847fd936b71996ca701f 903 SUPERFAMILY SSF81886 620 891 1.22E-84 T 11-10-2018 IPR036266 SecA, Wing/Scaffold superfamily AL543_06755 71326ca90a40847fd936b71996ca701f 903 Pfam PF07517 SecA DEAD-like domain 7 403 2.4E-133 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 AL543_06755 71326ca90a40847fd936b71996ca701f 903 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 20.093 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AL543_06755 71326ca90a40847fd936b71996ca701f 903 Gene3D G3DSA:1.10.3060.10 621 833 3.4E-76 T 11-10-2018 AL543_06755 71326ca90a40847fd936b71996ca701f 903 Gene3D G3DSA:3.90.1440.10 229 369 9.2E-176 T 11-10-2018 AL543_06755 71326ca90a40847fd936b71996ca701f 903 SUPERFAMILY SSF81767 227 369 3.79E-43 T 11-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 AL543_06755 71326ca90a40847fd936b71996ca701f 903 SUPERFAMILY SSF52540 418 610 1.87E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_06755 71326ca90a40847fd936b71996ca701f 903 ProSitePatterns PS01312 SecA family signature. 501 516 - T 11-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 AL543_06755 71326ca90a40847fd936b71996ca701f 903 Gene3D G3DSA:3.40.50.300 418 620 4.0E-88 T 11-10-2018 AL543_06755 71326ca90a40847fd936b71996ca701f 903 Pfam PF07516 SecA Wing and Scaffold domain 617 829 1.1E-67 T 11-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AL543_06755 71326ca90a40847fd936b71996ca701f 903 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 817 0.0 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AL543_06755 71326ca90a40847fd936b71996ca701f 903 SUPERFAMILY SSF52540 5 416 2.75E-85 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_06755 71326ca90a40847fd936b71996ca701f 903 Gene3D G3DSA:3.40.50.300 22 416 9.2E-176 T 11-10-2018 AL543_06755 71326ca90a40847fd936b71996ca701f 903 PRINTS PR00906 SecA protein signature 170 190 1.6E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AL543_06755 71326ca90a40847fd936b71996ca701f 903 PRINTS PR00906 SecA protein signature 414 427 1.6E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AL543_06755 71326ca90a40847fd936b71996ca701f 903 PRINTS PR00906 SecA protein signature 340 362 1.6E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AL543_06755 71326ca90a40847fd936b71996ca701f 903 PRINTS PR00906 SecA protein signature 63 87 1.6E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AL543_06755 71326ca90a40847fd936b71996ca701f 903 PRINTS PR00906 SecA protein signature 101 115 1.6E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AL543_06755 71326ca90a40847fd936b71996ca701f 903 PRINTS PR00906 SecA protein signature 117 127 1.6E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AL543_06755 71326ca90a40847fd936b71996ca701f 903 PRINTS PR00906 SecA protein signature 377 394 1.6E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AL543_06755 71326ca90a40847fd936b71996ca701f 903 SMART SM00958 228 359 9.0E-83 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 AL543_19985 96aadb75c369b0efb8d6166876139429 136 Gene3D G3DSA:1.20.120.340 2 125 1.0E-40 T 11-10-2018 AL543_19985 96aadb75c369b0efb8d6166876139429 136 TIGRFAM TIGR00208 fliS: flagellar protein FliS 4 122 2.4E-26 T 11-10-2018 IPR003713 Flagellar protein FliS GO:0044780 AL543_19985 96aadb75c369b0efb8d6166876139429 136 PIRSF PIRSF039090 1 133 9.5E-45 T 11-10-2018 IPR003713 Flagellar protein FliS GO:0044780 AL543_19985 96aadb75c369b0efb8d6166876139429 136 Pfam PF02561 Flagellar protein FliS 6 122 1.4E-38 T 11-10-2018 IPR003713 Flagellar protein FliS GO:0044780 AL543_19985 96aadb75c369b0efb8d6166876139429 136 SUPERFAMILY SSF101116 6 127 6.15E-40 T 11-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 AL543_13230 de6abc0acc75d62929b72b351cddc3d7 227 Gene3D G3DSA:3.40.50.2300 2 144 7.9E-26 T 11-10-2018 AL543_13230 de6abc0acc75d62929b72b351cddc3d7 227 SUPERFAMILY SSF52172 5 147 1.71E-30 T 11-10-2018 IPR011006 CheY-like superfamily AL543_13230 de6abc0acc75d62929b72b351cddc3d7 227 Pfam PF00072 Response regulator receiver domain 7 117 3.4E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_13230 de6abc0acc75d62929b72b351cddc3d7 227 Pfam PF12431 Transcriptional regulator 134 162 9.0E-11 T 11-10-2018 IPR028141 Transcriptional regulator AL543_13230 de6abc0acc75d62929b72b351cddc3d7 227 PIRSF PIRSF006171 3 227 9.3E-80 T 11-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 AL543_13230 de6abc0acc75d62929b72b351cddc3d7 227 SMART SM00448 5 118 8.3E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_16285 43690d2523f9e07466cb91187f8cd5ee 347 Pfam PF13384 Homeodomain-like domain 28 67 4.3E-7 T 11-10-2018 AL543_16285 43690d2523f9e07466cb91187f8cd5ee 347 Gene3D G3DSA:3.30.420.470 138 344 4.4E-12 T 11-10-2018 AL543_16285 43690d2523f9e07466cb91187f8cd5ee 347 SUPERFAMILY SSF53098 221 316 2.58E-7 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_16285 43690d2523f9e07466cb91187f8cd5ee 347 SUPERFAMILY SSF46689 16 131 1.91E-23 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_16285 43690d2523f9e07466cb91187f8cd5ee 347 Pfam PF13358 DDE superfamily endonuclease 169 312 1.9E-34 T 11-10-2018 IPR038717 Tc1-like transposase, DDE domain AL543_16285 43690d2523f9e07466cb91187f8cd5ee 347 Pfam PF13592 Winged helix-turn helix 99 155 3.7E-18 T 11-10-2018 IPR025959 Winged helix-turn helix domain AL543_06015 43690d2523f9e07466cb91187f8cd5ee 347 Pfam PF13384 Homeodomain-like domain 28 67 4.3E-7 T 11-10-2018 AL543_06015 43690d2523f9e07466cb91187f8cd5ee 347 Gene3D G3DSA:3.30.420.470 138 344 4.4E-12 T 11-10-2018 AL543_06015 43690d2523f9e07466cb91187f8cd5ee 347 SUPERFAMILY SSF53098 221 316 2.58E-7 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_06015 43690d2523f9e07466cb91187f8cd5ee 347 SUPERFAMILY SSF46689 16 131 1.91E-23 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_06015 43690d2523f9e07466cb91187f8cd5ee 347 Pfam PF13358 DDE superfamily endonuclease 169 312 1.9E-34 T 11-10-2018 IPR038717 Tc1-like transposase, DDE domain AL543_06015 43690d2523f9e07466cb91187f8cd5ee 347 Pfam PF13592 Winged helix-turn helix 99 155 3.7E-18 T 11-10-2018 IPR025959 Winged helix-turn helix domain AL543_18025 43690d2523f9e07466cb91187f8cd5ee 347 Pfam PF13384 Homeodomain-like domain 28 67 4.3E-7 T 11-10-2018 AL543_18025 43690d2523f9e07466cb91187f8cd5ee 347 Gene3D G3DSA:3.30.420.470 138 344 4.4E-12 T 11-10-2018 AL543_18025 43690d2523f9e07466cb91187f8cd5ee 347 SUPERFAMILY SSF53098 221 316 2.58E-7 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_18025 43690d2523f9e07466cb91187f8cd5ee 347 SUPERFAMILY SSF46689 16 131 1.91E-23 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_18025 43690d2523f9e07466cb91187f8cd5ee 347 Pfam PF13358 DDE superfamily endonuclease 169 312 1.9E-34 T 11-10-2018 IPR038717 Tc1-like transposase, DDE domain AL543_18025 43690d2523f9e07466cb91187f8cd5ee 347 Pfam PF13592 Winged helix-turn helix 99 155 3.7E-18 T 11-10-2018 IPR025959 Winged helix-turn helix domain AL543_12510 43690d2523f9e07466cb91187f8cd5ee 347 Pfam PF13384 Homeodomain-like domain 28 67 4.3E-7 T 11-10-2018 AL543_12510 43690d2523f9e07466cb91187f8cd5ee 347 Gene3D G3DSA:3.30.420.470 138 344 4.4E-12 T 11-10-2018 AL543_12510 43690d2523f9e07466cb91187f8cd5ee 347 SUPERFAMILY SSF53098 221 316 2.58E-7 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_12510 43690d2523f9e07466cb91187f8cd5ee 347 SUPERFAMILY SSF46689 16 131 1.91E-23 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_12510 43690d2523f9e07466cb91187f8cd5ee 347 Pfam PF13358 DDE superfamily endonuclease 169 312 1.9E-34 T 11-10-2018 IPR038717 Tc1-like transposase, DDE domain AL543_12510 43690d2523f9e07466cb91187f8cd5ee 347 Pfam PF13592 Winged helix-turn helix 99 155 3.7E-18 T 11-10-2018 IPR025959 Winged helix-turn helix domain AL543_18930 e868e801c8ad579a134b5894ec70c63f 489 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 5 475 44.204 T 11-10-2018 IPR003846 Uncharacterised protein family UPF0061 AL543_18930 e868e801c8ad579a134b5894ec70c63f 489 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 9 458 3.0E-154 T 11-10-2018 IPR003846 Uncharacterised protein family UPF0061 AL543_17020 3c54f54d7fdb270600845cdcc1aa4674 434 Pfam PF13416 Bacterial extracellular solute-binding protein 45 367 3.7E-38 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein AL543_17020 3c54f54d7fdb270600845cdcc1aa4674 434 Gene3D G3DSA:3.40.190.10 30 380 3.8E-116 T 11-10-2018 AL543_17020 3c54f54d7fdb270600845cdcc1aa4674 434 SUPERFAMILY SSF53850 26 421 9.83E-70 T 11-10-2018 AL543_17020 3c54f54d7fdb270600845cdcc1aa4674 434 Gene3D G3DSA:3.40.190.10 146 419 3.8E-116 T 11-10-2018 AL543_07840 e3ba5fe6e6dd088bb25a5aa5e7de3ce3 200 Gene3D G3DSA:3.40.1370.10 5 200 4.2E-69 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 AL543_07840 e3ba5fe6e6dd088bb25a5aa5e7de3ce3 200 SUPERFAMILY SSF52166 8 199 7.46E-74 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 AL543_07840 e3ba5fe6e6dd088bb25a5aa5e7de3ce3 200 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 3 200 33.953 T 11-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_07840 e3ba5fe6e6dd088bb25a5aa5e7de3ce3 200 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 12 197 5.0E-76 T 11-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_07840 e3ba5fe6e6dd088bb25a5aa5e7de3ce3 200 Pfam PF00573 Ribosomal protein L4/L1 family 12 197 1.4E-65 T 11-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 AL543_08580 6911b47f1266563097888be5f137eaf9 352 SUPERFAMILY SSF55874 197 347 1.96E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_08580 6911b47f1266563097888be5f137eaf9 352 Gene3D G3DSA:3.30.450.20 2 112 1.3E-27 T 11-10-2018 AL543_08580 6911b47f1266563097888be5f137eaf9 352 SUPERFAMILY SSF55785 4 97 3.84E-10 T 11-10-2018 IPR035965 PAS domain superfamily AL543_08580 6911b47f1266563097888be5f137eaf9 352 SMART SM00388 129 194 9.7E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_08580 6911b47f1266563097888be5f137eaf9 352 SMART SM00091 4 72 4.2E-7 T 11-10-2018 IPR000014 PAS domain AL543_08580 6911b47f1266563097888be5f137eaf9 352 PRINTS PR00344 Bacterial sensor protein C-terminal signature 282 296 1.9E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_08580 6911b47f1266563097888be5f137eaf9 352 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 347 1.9E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_08580 6911b47f1266563097888be5f137eaf9 352 PRINTS PR00344 Bacterial sensor protein C-terminal signature 311 329 1.9E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_08580 6911b47f1266563097888be5f137eaf9 352 Pfam PF00512 His Kinase A (phospho-acceptor) domain 133 190 3.1E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_08580 6911b47f1266563097888be5f137eaf9 352 Gene3D G3DSA:3.30.565.10 192 348 8.1E-41 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_08580 6911b47f1266563097888be5f137eaf9 352 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 7 121 1.0E-6 T 11-10-2018 IPR000014 PAS domain AL543_08580 6911b47f1266563097888be5f137eaf9 352 Pfam PF00989 PAS fold 7 106 1.3E-15 T 11-10-2018 IPR013767 PAS fold GO:0006355 AL543_08580 6911b47f1266563097888be5f137eaf9 352 SUPERFAMILY SSF47384 125 192 5.3E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL543_08580 6911b47f1266563097888be5f137eaf9 352 SMART SM00387 233 350 1.3E-32 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_08580 6911b47f1266563097888be5f137eaf9 352 Gene3D G3DSA:1.10.287.130 114 191 9.3E-14 T 11-10-2018 AL543_08580 6911b47f1266563097888be5f137eaf9 352 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 347 1.4E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_08750 ad16ab4aef8df1ffe7c51bacb5d80086 421 Gene3D G3DSA:3.90.220.20 214 357 2.0E-37 T 11-10-2018 AL543_08750 ad16ab4aef8df1ffe7c51bacb5d80086 421 Gene3D G3DSA:3.90.220.20 15 209 1.2E-24 T 11-10-2018 AL543_08750 ad16ab4aef8df1ffe7c51bacb5d80086 421 Gene3D G3DSA:1.10.287.1120 358 390 2.0E-37 T 11-10-2018 AL543_08750 ad16ab4aef8df1ffe7c51bacb5d80086 421 Pfam PF01420 Type I restriction modification DNA specificity domain 108 194 4.8E-7 T 11-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 AL543_08750 ad16ab4aef8df1ffe7c51bacb5d80086 421 Pfam PF01420 Type I restriction modification DNA specificity domain 215 397 3.3E-23 T 11-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 AL543_08750 ad16ab4aef8df1ffe7c51bacb5d80086 421 SUPERFAMILY SSF116734 16 211 1.96E-23 T 11-10-2018 AL543_08750 ad16ab4aef8df1ffe7c51bacb5d80086 421 SUPERFAMILY SSF116734 213 412 2.94E-37 T 11-10-2018 AL543_11950 cc86803420fdaaf003d855686ae91bf6 184 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 16 183 1.5E-56 T 11-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 AL543_11950 cc86803420fdaaf003d855686ae91bf6 184 Pfam PF01782 RimM N-terminal domain 17 98 1.7E-26 T 11-10-2018 IPR002676 RimM, N-terminal GO:0006364 AL543_11950 cc86803420fdaaf003d855686ae91bf6 184 SUPERFAMILY SSF50447 15 102 5.65E-25 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AL543_11950 cc86803420fdaaf003d855686ae91bf6 184 Pfam PF05239 PRC-barrel domain 105 179 3.3E-12 T 11-10-2018 IPR027275 PRC-barrel domain AL543_11950 cc86803420fdaaf003d855686ae91bf6 184 Gene3D G3DSA:2.30.30.240 103 184 4.3E-31 T 11-10-2018 AL543_11950 cc86803420fdaaf003d855686ae91bf6 184 Gene3D G3DSA:2.40.30.60 6 102 7.8E-33 T 11-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 AL543_11950 cc86803420fdaaf003d855686ae91bf6 184 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 15 184 23.882 T 11-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 AL543_11950 cc86803420fdaaf003d855686ae91bf6 184 SUPERFAMILY SSF50346 108 182 3.34E-19 T 11-10-2018 IPR011033 PRC-barrel-like superfamily AL543_01160 978b3a750c67e379cd9df794feaf84d7 808 Gene3D G3DSA:1.20.1610.10 494 672 1.5E-201 T 11-10-2018 AL543_01160 978b3a750c67e379cd9df794feaf84d7 808 Gene3D G3DSA:1.20.1050.60 377 493 1.5E-201 T 11-10-2018 AL543_01160 978b3a750c67e379cd9df794feaf84d7 808 Gene3D G3DSA:3.30.2080.10 318 798 1.5E-201 T 11-10-2018 AL543_01160 978b3a750c67e379cd9df794feaf84d7 808 Gene3D G3DSA:2.70.98.10 37 376 1.5E-201 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AL543_01160 978b3a750c67e379cd9df794feaf84d7 808 SUPERFAMILY SSF48208 292 779 2.04E-19 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AL543_01160 978b3a750c67e379cd9df794feaf84d7 808 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 13 799 3.7E-156 T 11-10-2018 IPR005887 Alpha-1,2-mannosidase, putative AL543_01160 978b3a750c67e379cd9df794feaf84d7 808 Pfam PF07971 Glycosyl hydrolase family 92 260 796 1.5E-141 T 11-10-2018 IPR012939 Glycosyl hydrolase family 92 AL543_18340 f7c0a5e98035cb2cd92b80766b4d4178 541 PIRSF PIRSF006446 13 344 7.9E-119 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AL543_18340 f7c0a5e98035cb2cd92b80766b4d4178 541 PIRSF PIRSF006446 359 541 5.1E-33 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AL543_18340 f7c0a5e98035cb2cd92b80766b4d4178 541 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 20 514 2.4E-177 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AL543_13205 af653be86febebd10607c1c5e3593fc0 299 Pfam PF03466 LysR substrate binding domain 91 295 2.5E-27 T 11-10-2018 IPR005119 LysR, substrate-binding AL543_13205 af653be86febebd10607c1c5e3593fc0 299 SUPERFAMILY SSF46785 9 113 3.75E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_13205 af653be86febebd10607c1c5e3593fc0 299 Gene3D G3DSA:3.40.190.10 102 293 2.0E-47 T 11-10-2018 AL543_13205 af653be86febebd10607c1c5e3593fc0 299 Gene3D G3DSA:1.10.10.10 5 98 6.8E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_13205 af653be86febebd10607c1c5e3593fc0 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 1.7E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_13205 af653be86febebd10607c1c5e3593fc0 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 5.5E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_13205 af653be86febebd10607c1c5e3593fc0 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 5.5E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_13205 af653be86febebd10607c1c5e3593fc0 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 5.5E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_13205 af653be86febebd10607c1c5e3593fc0 299 SUPERFAMILY SSF53850 82 297 4.52E-29 T 11-10-2018 AL543_13205 af653be86febebd10607c1c5e3593fc0 299 Gene3D G3DSA:3.40.190.10 162 270 2.0E-47 T 11-10-2018 AL543_15435 7f4cf8c1fef0b00fff645c20f4c8e0dd 98 Gene3D G3DSA:4.10.520.10 1 98 4.0E-38 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AL543_15435 7f4cf8c1fef0b00fff645c20f4c8e0dd 98 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 5.9E-17 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL543_15435 7f4cf8c1fef0b00fff645c20f4c8e0dd 98 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 5.9E-17 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL543_15435 7f4cf8c1fef0b00fff645c20f4c8e0dd 98 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 5.9E-17 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL543_15435 7f4cf8c1fef0b00fff645c20f4c8e0dd 98 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 30.411 T 11-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 AL543_15435 7f4cf8c1fef0b00fff645c20f4c8e0dd 98 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 94 9.2E-51 T 11-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 AL543_15435 7f4cf8c1fef0b00fff645c20f4c8e0dd 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AL543_15435 7f4cf8c1fef0b00fff645c20f4c8e0dd 98 SMART SM00411 3 92 7.9E-41 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL543_15435 7f4cf8c1fef0b00fff645c20f4c8e0dd 98 Pfam PF00216 Bacterial DNA-binding protein 3 91 5.3E-32 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL543_15435 7f4cf8c1fef0b00fff645c20f4c8e0dd 98 SUPERFAMILY SSF47729 3 95 1.4E-32 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AL543_15950 a963c458a18a14208d3602bb62f0af93 433 SUPERFAMILY SSF158472 160 209 9.94E-6 T 11-10-2018 AL543_15950 a963c458a18a14208d3602bb62f0af93 433 Pfam PF00672 HAMP domain 161 208 4.0E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_15950 a963c458a18a14208d3602bb62f0af93 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 408 4.7E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_15950 a963c458a18a14208d3602bb62f0af93 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 383 4.7E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_15950 a963c458a18a14208d3602bb62f0af93 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 355 369 4.7E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_15950 a963c458a18a14208d3602bb62f0af93 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 427 4.7E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_15950 a963c458a18a14208d3602bb62f0af93 433 SUPERFAMILY SSF55874 266 428 3.67E-37 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_15950 a963c458a18a14208d3602bb62f0af93 433 Pfam PF00512 His Kinase A (phospho-acceptor) domain 215 276 3.7E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_15950 a963c458a18a14208d3602bb62f0af93 433 Gene3D G3DSA:1.10.287.130 163 278 1.4E-21 T 11-10-2018 AL543_15950 a963c458a18a14208d3602bb62f0af93 433 SUPERFAMILY SSF47384 195 277 6.87E-15 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL543_15950 a963c458a18a14208d3602bb62f0af93 433 SMART SM00387 320 430 1.5E-32 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_15950 a963c458a18a14208d3602bb62f0af93 433 SMART SM00304 159 211 1.6E-5 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_15950 a963c458a18a14208d3602bb62f0af93 433 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 323 429 6.0E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_15950 a963c458a18a14208d3602bb62f0af93 433 Gene3D G3DSA:3.30.565.10 282 433 3.4E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_15950 a963c458a18a14208d3602bb62f0af93 433 SMART SM00388 212 277 6.9E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_06160 e70ec5a38d3010bedece673f72aeb4bb 168 PIRSF PIRSF006162 4 166 9.7E-54 T 11-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AL543_06160 e70ec5a38d3010bedece673f72aeb4bb 168 SUPERFAMILY SSF101307 8 161 5.76E-48 T 11-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 AL543_06160 e70ec5a38d3010bedece673f72aeb4bb 168 Pfam PF04608 Phosphatidylglycerophosphatase A 15 160 6.0E-52 T 11-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 AL543_05855 0c8cde59d42878073b40e67d48a4ad12 177 Gene3D G3DSA:3.40.630.30 14 173 6.6E-46 T 11-10-2018 AL543_05855 0c8cde59d42878073b40e67d48a4ad12 177 Pfam PF00583 Acetyltransferase (GNAT) family 49 135 1.4E-13 T 11-10-2018 IPR000182 GNAT domain AL543_05855 0c8cde59d42878073b40e67d48a4ad12 177 TIGRFAM TIGR02406 ectoine_EctA: diaminobutyrate acetyltransferase 16 169 1.6E-57 T 11-10-2018 IPR012772 L-2,4-diaminobutyric acid acetyltransferase GO:0019491|GO:0033816 KEGG: 00260+2.3.1.178 AL543_05855 0c8cde59d42878073b40e67d48a4ad12 177 SUPERFAMILY SSF55729 15 135 5.4E-21 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL543_16125 b9bd639c95b32a006f9ea95769b31d56 467 Gene3D G3DSA:1.10.287.950 139 466 1.9E-64 T 11-10-2018 AL543_16125 b9bd639c95b32a006f9ea95769b31d56 467 SUPERFAMILY SSF58104 157 466 5.89E-67 T 11-10-2018 AL543_16125 b9bd639c95b32a006f9ea95769b31d56 467 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 250 431 1.7E-36 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_16125 b9bd639c95b32a006f9ea95769b31d56 467 SMART SM00283 205 466 4.5E-53 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_11655 c5fb06979371afd561067564f9888a33 298 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 298 58.421 T 11-10-2018 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria AL543_11655 c5fb06979371afd561067564f9888a33 298 Gene3D G3DSA:3.40.190.290 89 296 9.8E-65 T 11-10-2018 AL543_11655 c5fb06979371afd561067564f9888a33 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 8.8E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_11655 c5fb06979371afd561067564f9888a33 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 8.8E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_11655 c5fb06979371afd561067564f9888a33 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 8.8E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_11655 c5fb06979371afd561067564f9888a33 298 SUPERFAMILY SSF46785 4 112 8.71E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_11655 c5fb06979371afd561067564f9888a33 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.5E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_11655 c5fb06979371afd561067564f9888a33 298 SUPERFAMILY SSF53850 96 291 2.53E-20 T 11-10-2018 AL543_11655 c5fb06979371afd561067564f9888a33 298 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 4 295 5.6E-104 T 11-10-2018 IPR017685 HTH-type transcriptional regulator ArgP AL543_11655 c5fb06979371afd561067564f9888a33 298 Gene3D G3DSA:1.10.10.10 2 85 1.4E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_11655 c5fb06979371afd561067564f9888a33 298 Pfam PF03466 LysR substrate binding domain 97 260 8.4E-10 T 11-10-2018 IPR005119 LysR, substrate-binding AL543_00085 e808b97010956bd7e47ea0e712a128f9 253 SMART SM01134 73 233 1.8E-59 T 11-10-2018 AL543_00085 e808b97010956bd7e47ea0e712a128f9 253 SMART SM00420 6 58 1.4E-22 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL543_00085 e808b97010956bd7e47ea0e712a128f9 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 11-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AL543_00085 e808b97010956bd7e47ea0e712a128f9 253 Pfam PF00455 DeoR C terminal sensor domain 75 231 9.9E-46 T 11-10-2018 IPR014036 DeoR C-terminal sensor domain AL543_00085 e808b97010956bd7e47ea0e712a128f9 253 Gene3D G3DSA:1.10.10.10 1 59 3.2E-10 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_00085 e808b97010956bd7e47ea0e712a128f9 253 SUPERFAMILY SSF100950 75 233 2.93E-26 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AL543_00085 e808b97010956bd7e47ea0e712a128f9 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.8E-6 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL543_00085 e808b97010956bd7e47ea0e712a128f9 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.8E-6 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL543_00085 e808b97010956bd7e47ea0e712a128f9 253 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 4.5E-17 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL543_00085 e808b97010956bd7e47ea0e712a128f9 253 SUPERFAMILY SSF46785 5 62 5.13E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_00110 95e5a5d2d25ea95b1f6efcbc52e47706 323 SUPERFAMILY SSF51735 1 312 2.73E-41 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_00110 95e5a5d2d25ea95b1f6efcbc52e47706 323 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 200 4.0E-25 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AL543_00110 95e5a5d2d25ea95b1f6efcbc52e47706 323 Gene3D G3DSA:3.40.50.720 8 299 4.1E-107 T 11-10-2018 AL543_00110 95e5a5d2d25ea95b1f6efcbc52e47706 323 Gene3D G3DSA:3.90.25.10 172 307 4.1E-107 T 11-10-2018 AL543_01455 2ae26dfe08e7b1ed8a605e47e849eb72 250 Pfam PF01569 PAP2 superfamily 84 232 8.5E-23 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL543_01455 2ae26dfe08e7b1ed8a605e47e849eb72 250 Gene3D G3DSA:1.20.144.10 8 246 2.8E-51 T 11-10-2018 AL543_01455 2ae26dfe08e7b1ed8a605e47e849eb72 250 SUPERFAMILY SSF48317 13 242 4.71E-29 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AL543_01455 2ae26dfe08e7b1ed8a605e47e849eb72 250 SMART SM00014 85 230 6.1E-18 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL543_03105 331e5858458407df4a4aa53f7f1c2f95 207 Gene3D G3DSA:1.10.287.110 149 207 2.4E-11 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AL543_03105 331e5858458407df4a4aa53f7f1c2f95 207 SUPERFAMILY SSF46565 156 205 2.36E-12 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AL543_03105 331e5858458407df4a4aa53f7f1c2f95 207 SMART SM00271 153 206 3.9E-5 T 11-10-2018 IPR001623 DnaJ domain AL543_03105 331e5858458407df4a4aa53f7f1c2f95 207 Pfam PF12339 DNA-J related protein 17 138 2.5E-41 T 11-10-2018 IPR021059 DnaJ-related protein, N-terminal AL543_03105 331e5858458407df4a4aa53f7f1c2f95 207 Pfam PF00226 DnaJ domain 159 205 3.2E-10 T 11-10-2018 IPR001623 DnaJ domain AL543_11540 40e0cbda47f6b6097c3846c1b4dbdafe 272 SUPERFAMILY SSF51735 4 160 4.88E-40 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_11540 40e0cbda47f6b6097c3846c1b4dbdafe 272 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 268 9.2E-72 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AL543_11540 40e0cbda47f6b6097c3846c1b4dbdafe 272 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 6 99 6.7E-26 T 11-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal AL543_11540 40e0cbda47f6b6097c3846c1b4dbdafe 272 Gene3D G3DSA:1.10.3730.10 165 272 2.3E-33 T 11-10-2018 AL543_11540 40e0cbda47f6b6097c3846c1b4dbdafe 272 SUPERFAMILY SSF48179 162 270 1.24E-29 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AL543_11540 40e0cbda47f6b6097c3846c1b4dbdafe 272 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 224 246 - T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AL543_11540 40e0cbda47f6b6097c3846c1b4dbdafe 272 PIRSF PIRSF000193 3 270 2.7E-78 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AL543_11540 40e0cbda47f6b6097c3846c1b4dbdafe 272 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 268 26.049 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AL543_11540 40e0cbda47f6b6097c3846c1b4dbdafe 272 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 268 4.8E-29 T 11-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AL543_11540 40e0cbda47f6b6097c3846c1b4dbdafe 272 Gene3D G3DSA:3.40.50.720 2 164 1.6E-53 T 11-10-2018 AL543_03760 0eccdfe6a422c5fddae07fc4d017db0e 191 TIGRFAM TIGR02161 napC_nirT: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family 4 185 4.3E-94 T 11-10-2018 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT GO:0016021|GO:0019333|GO:0020037 AL543_03760 0eccdfe6a422c5fddae07fc4d017db0e 191 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 15 184 2.0E-71 T 11-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal AL543_03760 0eccdfe6a422c5fddae07fc4d017db0e 191 SUPERFAMILY SSF48695 16 190 1.26E-56 T 11-10-2018 IPR036280 Multiheme cytochrome superfamily AL543_03760 0eccdfe6a422c5fddae07fc4d017db0e 191 Gene3D G3DSA:1.10.3820.10 11 187 1.1E-33 T 11-10-2018 IPR038266 NapC/NirT cytochrome c superfamily AL543_03760 0eccdfe6a422c5fddae07fc4d017db0e 191 PIRSF PIRSF000013 1 191 3.2E-95 T 11-10-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 AL543_06660 f85010a74e5f59289d0e13e56a9706b3 785 SMART SM00387 394 510 3.9E-35 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_06660 f85010a74e5f59289d0e13e56a9706b3 785 Gene3D G3DSA:3.30.565.10 349 511 4.1E-46 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_06660 f85010a74e5f59289d0e13e56a9706b3 785 SUPERFAMILY SSF47384 270 347 2.35E-16 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL543_06660 f85010a74e5f59289d0e13e56a9706b3 785 SUPERFAMILY SSF55785 140 267 5.23E-24 T 11-10-2018 IPR035965 PAS domain superfamily AL543_06660 f85010a74e5f59289d0e13e56a9706b3 785 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 507 1.8E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_06660 f85010a74e5f59289d0e13e56a9706b3 785 Gene3D G3DSA:3.30.450.20 142 272 3.4E-24 T 11-10-2018 AL543_06660 f85010a74e5f59289d0e13e56a9706b3 785 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 507 7.6E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_06660 f85010a74e5f59289d0e13e56a9706b3 785 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 448 7.6E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_06660 f85010a74e5f59289d0e13e56a9706b3 785 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 462 7.6E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_06660 f85010a74e5f59289d0e13e56a9706b3 785 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 488 7.6E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_06660 f85010a74e5f59289d0e13e56a9706b3 785 SUPERFAMILY SSF47226 668 779 3.79E-27 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AL543_06660 f85010a74e5f59289d0e13e56a9706b3 785 SUPERFAMILY SSF52172 526 646 1.05E-24 T 11-10-2018 IPR011006 CheY-like superfamily AL543_06660 f85010a74e5f59289d0e13e56a9706b3 785 Pfam PF01627 Hpt domain 692 763 1.3E-10 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AL543_06660 f85010a74e5f59289d0e13e56a9706b3 785 Gene3D G3DSA:1.20.120.160 662 783 3.5E-29 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AL543_06660 f85010a74e5f59289d0e13e56a9706b3 785 SUPERFAMILY SSF55874 336 507 7.73E-41 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_06660 f85010a74e5f59289d0e13e56a9706b3 785 Pfam PF00989 PAS fold 157 266 8.3E-17 T 11-10-2018 IPR013767 PAS fold GO:0006355 AL543_06660 f85010a74e5f59289d0e13e56a9706b3 785 Pfam PF00072 Response regulator receiver domain 529 638 1.6E-17 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_06660 f85010a74e5f59289d0e13e56a9706b3 785 SMART SM00448 527 638 3.0E-19 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_06660 f85010a74e5f59289d0e13e56a9706b3 785 Gene3D G3DSA:3.40.50.2300 515 651 6.3E-27 T 11-10-2018 AL543_06660 f85010a74e5f59289d0e13e56a9706b3 785 SMART SM00388 282 347 6.5E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_06660 f85010a74e5f59289d0e13e56a9706b3 785 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 345 1.7E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_06660 f85010a74e5f59289d0e13e56a9706b3 785 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 276 7.7E-18 T 11-10-2018 IPR000014 PAS domain AL543_06660 f85010a74e5f59289d0e13e56a9706b3 785 Gene3D G3DSA:1.10.287.970 1 89 3.2E-38 T 11-10-2018 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily AL543_06660 f85010a74e5f59289d0e13e56a9706b3 785 SMART SM00091 155 221 3.7E-8 T 11-10-2018 IPR000014 PAS domain AL543_06660 f85010a74e5f59289d0e13e56a9706b3 785 PIRSF PIRSF003182 1 783 0.0 T 11-10-2018 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 AL543_06660 f85010a74e5f59289d0e13e56a9706b3 785 SMART SM00073 680 777 1.4E-8 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AL543_06660 f85010a74e5f59289d0e13e56a9706b3 785 Gene3D G3DSA:1.10.287.130 273 348 1.7E-19 T 11-10-2018 AL543_16790 3ac993dfb3ffc55590ac4f58a47e46d4 277 Pfam PF13509 S1 domain 4 63 1.2E-22 T 11-10-2018 IPR039566 Conserved virulence factor B, S1 domain AL543_16790 3ac993dfb3ffc55590ac4f58a47e46d4 277 PIRSF PIRSF012524 1 277 1.2E-104 T 11-10-2018 IPR014464 Conserved virulence factor B AL543_16790 3ac993dfb3ffc55590ac4f58a47e46d4 277 SMART SM00316 3 64 21.0 T 11-10-2018 IPR022967 RNA-binding domain, S1 AL543_16790 3ac993dfb3ffc55590ac4f58a47e46d4 277 SMART SM00316 145 207 2.3 T 11-10-2018 IPR022967 RNA-binding domain, S1 AL543_16790 3ac993dfb3ffc55590ac4f58a47e46d4 277 SMART SM00316 69 132 6.6 T 11-10-2018 IPR022967 RNA-binding domain, S1 AL543_16790 3ac993dfb3ffc55590ac4f58a47e46d4 277 Gene3D G3DSA:1.10.10.10 215 277 7.6E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_10915 46f4a94707cc46e080af70e19675010b 394 SUPERFAMILY SSF50465 298 393 3.17E-35 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AL543_10915 46f4a94707cc46e080af70e19675010b 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 59.603 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL543_10915 46f4a94707cc46e080af70e19675010b 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site AL543_10915 46f4a94707cc46e080af70e19675010b 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 4.0E-17 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AL543_10915 46f4a94707cc46e080af70e19675010b 394 Gene3D G3DSA:3.40.50.300 1 203 1.4E-70 T 11-10-2018 AL543_10915 46f4a94707cc46e080af70e19675010b 394 Gene3D G3DSA:2.40.30.10 338 393 1.3E-29 T 11-10-2018 AL543_10915 46f4a94707cc46e080af70e19675010b 394 Gene3D G3DSA:2.40.30.10 207 334 3.1E-51 T 11-10-2018 AL543_10915 46f4a94707cc46e080af70e19675010b 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.2E-13 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL543_10915 46f4a94707cc46e080af70e19675010b 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 3.0E-33 T 11-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AL543_10915 46f4a94707cc46e080af70e19675010b 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 3.5E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL543_10915 46f4a94707cc46e080af70e19675010b 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 3.5E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL543_10915 46f4a94707cc46e080af70e19675010b 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 3.5E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL543_10915 46f4a94707cc46e080af70e19675010b 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 3.5E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL543_10915 46f4a94707cc46e080af70e19675010b 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 3.5E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL543_10915 46f4a94707cc46e080af70e19675010b 394 SUPERFAMILY SSF50447 205 301 2.75E-29 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AL543_10915 46f4a94707cc46e080af70e19675010b 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 1.5E-58 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL543_10915 46f4a94707cc46e080af70e19675010b 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 393 1.2E-232 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL543_10915 46f4a94707cc46e080af70e19675010b 394 SUPERFAMILY SSF52540 6 219 1.61E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_01025 c6ff3187464aae58cbe12737100a82a5 205 Hamap MF_00587 tRNA (pseudouridine(54)-N(1))-methyltransferase [trmY]. 5 202 26.481 T 11-10-2018 IPR007158 tRNA (pseudouridine(54)-N(1))-methyltransferase, TrmY GO:0008175 AL543_01025 c6ff3187464aae58cbe12737100a82a5 205 Gene3D G3DSA:3.40.1280.10 1 205 1.3E-68 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL543_01025 c6ff3187464aae58cbe12737100a82a5 205 Pfam PF04013 Putative SAM-dependent RNA methyltransferase 5 203 9.2E-85 T 11-10-2018 IPR007158 tRNA (pseudouridine(54)-N(1))-methyltransferase, TrmY GO:0008175 AL543_01025 c6ff3187464aae58cbe12737100a82a5 205 SUPERFAMILY SSF75217 5 205 1.03E-66 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AL543_18840 040b8b26f15fcb16c5eeaa50cd5ed97d 389 Pfam PF13176 Tetratricopeptide repeat 71 94 0.021 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL543_18840 040b8b26f15fcb16c5eeaa50cd5ed97d 389 Pfam PF13181 Tetratricopeptide repeat 180 213 0.048 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL543_18840 040b8b26f15fcb16c5eeaa50cd5ed97d 389 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 387 37.377 T 11-10-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 AL543_18840 040b8b26f15fcb16c5eeaa50cd5ed97d 389 Gene3D G3DSA:1.25.40.10 105 177 2.8E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_18840 040b8b26f15fcb16c5eeaa50cd5ed97d 389 Gene3D G3DSA:1.25.40.10 178 351 3.7E-17 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_18840 040b8b26f15fcb16c5eeaa50cd5ed97d 389 SMART SM00028 249 282 180.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL543_18840 040b8b26f15fcb16c5eeaa50cd5ed97d 389 SMART SM00028 141 174 120.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL543_18840 040b8b26f15fcb16c5eeaa50cd5ed97d 389 SMART SM00028 69 102 81.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL543_18840 040b8b26f15fcb16c5eeaa50cd5ed97d 389 SMART SM00028 180 213 1.8 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL543_18840 040b8b26f15fcb16c5eeaa50cd5ed97d 389 SMART SM00028 214 247 0.71 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL543_18840 040b8b26f15fcb16c5eeaa50cd5ed97d 389 Gene3D G3DSA:1.25.40.10 17 104 2.4E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_18840 040b8b26f15fcb16c5eeaa50cd5ed97d 389 SUPERFAMILY SSF81901 39 276 7.59E-20 T 11-10-2018 AL543_09100 9350872d52c7e269220f6a9e97ee7a70 512 SUPERFAMILY SSF55785 21 116 6.63E-27 T 11-10-2018 IPR035965 PAS domain superfamily AL543_09100 9350872d52c7e269220f6a9e97ee7a70 512 SMART SM00283 250 511 5.4E-41 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_09100 9350872d52c7e269220f6a9e97ee7a70 512 SMART SM00091 9 75 1.6E-4 T 11-10-2018 IPR000014 PAS domain AL543_09100 9350872d52c7e269220f6a9e97ee7a70 512 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 305 477 4.0E-34 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_09100 9350872d52c7e269220f6a9e97ee7a70 512 SUPERFAMILY SSF58104 233 506 5.23E-59 T 11-10-2018 AL543_09100 9350872d52c7e269220f6a9e97ee7a70 512 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 22 118 4.6E-16 T 11-10-2018 IPR000014 PAS domain AL543_09100 9350872d52c7e269220f6a9e97ee7a70 512 Pfam PF08447 PAS fold 32 115 4.7E-19 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 AL543_09100 9350872d52c7e269220f6a9e97ee7a70 512 Gene3D G3DSA:3.30.450.20 12 142 7.3E-27 T 11-10-2018 AL543_09100 9350872d52c7e269220f6a9e97ee7a70 512 Gene3D G3DSA:1.10.287.950 216 511 2.2E-52 T 11-10-2018 AL543_11175 5b55d2111b97e4382d7856615457300c 408 Gene3D G3DSA:1.20.81.30 60 177 6.7E-32 T 11-10-2018 AL543_11175 5b55d2111b97e4382d7856615457300c 408 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 167 195 - T 11-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 AL543_11175 5b55d2111b97e4382d7856615457300c 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 167 195 1.3E-9 T 11-10-2018 IPR003004 GspF/PilC family AL543_11175 5b55d2111b97e4382d7856615457300c 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 68 80 1.3E-9 T 11-10-2018 IPR003004 GspF/PilC family AL543_11175 5b55d2111b97e4382d7856615457300c 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 370 384 1.3E-9 T 11-10-2018 IPR003004 GspF/PilC family AL543_11175 5b55d2111b97e4382d7856615457300c 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 386 405 1.3E-9 T 11-10-2018 IPR003004 GspF/PilC family AL543_11175 5b55d2111b97e4382d7856615457300c 408 Pfam PF00482 Type II secretion system (T2SS), protein F 275 397 9.9E-27 T 11-10-2018 IPR018076 Type II secretion system F domain AL543_11175 5b55d2111b97e4382d7856615457300c 408 Pfam PF00482 Type II secretion system (T2SS), protein F 72 195 4.2E-31 T 11-10-2018 IPR018076 Type II secretion system F domain AL543_11175 5b55d2111b97e4382d7856615457300c 408 Gene3D G3DSA:1.20.81.30 258 371 4.4E-28 T 11-10-2018 AL543_04465 81fee5105ec5b4fa9910074c0d314d47 180 Pfam PF11810 Domain of unknown function (DUF3332) 7 174 1.1E-44 T 11-10-2018 IPR021768 Protein of unknown function DUF3332 AL543_10955 9a772345ff2d083df76a6481dc329235 468 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 24 461 5.1E-175 T 11-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 AL543_10955 9a772345ff2d083df76a6481dc329235 468 Pfam PF03796 DnaB-like helicase C terminal domain 203 459 2.4E-113 T 11-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 AL543_10955 9a772345ff2d083df76a6481dc329235 468 Pfam PF00772 DnaB-like helicase N terminal domain 24 124 3.6E-35 T 11-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AL543_10955 9a772345ff2d083df76a6481dc329235 468 Gene3D G3DSA:3.40.50.300 181 460 1.8E-106 T 11-10-2018 AL543_10955 9a772345ff2d083df76a6481dc329235 468 SUPERFAMILY SSF52540 201 452 2.17E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_10955 9a772345ff2d083df76a6481dc329235 468 SUPERFAMILY SSF48024 22 133 9.29E-37 T 11-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 AL543_10955 9a772345ff2d083df76a6481dc329235 468 Gene3D G3DSA:1.10.860.10 17 180 3.7E-53 T 11-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AL543_10475 d26d27917fe90f8503312f0aa299dbc5 331 Gene3D G3DSA:3.20.20.70 15 257 1.5E-78 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_10475 d26d27917fe90f8503312f0aa299dbc5 331 SUPERFAMILY SSF51395 19 328 4.76E-90 T 11-10-2018 AL543_10475 d26d27917fe90f8503312f0aa299dbc5 331 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 103 121 - T 11-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AL543_10475 d26d27917fe90f8503312f0aa299dbc5 331 PIRSF PIRSF006621 9 330 4.0E-103 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AL543_10475 d26d27917fe90f8503312f0aa299dbc5 331 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 12 329 2.6E-133 T 11-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 AL543_10475 d26d27917fe90f8503312f0aa299dbc5 331 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 10 330 49.504 T 11-10-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 AL543_10475 d26d27917fe90f8503312f0aa299dbc5 331 Pfam PF01207 Dihydrouridine synthase (Dus) 22 324 1.2E-111 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AL543_10475 d26d27917fe90f8503312f0aa299dbc5 331 Gene3D G3DSA:1.10.1200.80 262 331 7.6E-8 T 11-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 AL543_07845 b9ecddadf99024e593eb8b6a7e924405 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 11-10-2018 IPR019926 Ribosomal protein L3, conserved site AL543_07845 b9ecddadf99024e593eb8b6a7e924405 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 41.492 T 11-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_07845 b9ecddadf99024e593eb8b6a7e924405 209 Gene3D G3DSA:2.40.30.10 130 209 5.7E-20 T 11-10-2018 AL543_07845 b9ecddadf99024e593eb8b6a7e924405 209 SUPERFAMILY SSF50447 1 208 3.27E-84 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AL543_07845 b9ecddadf99024e593eb8b6a7e924405 209 Gene3D G3DSA:2.40.50.620 32 96 3.6E-16 T 11-10-2018 AL543_07845 b9ecddadf99024e593eb8b6a7e924405 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 4.3E-95 T 11-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_07845 b9ecddadf99024e593eb8b6a7e924405 209 Pfam PF00297 Ribosomal protein L3 83 182 2.0E-16 T 11-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_18775 dc4b224c9a953052d8ac533a58fcdab7 400 Gene3D G3DSA:3.40.50.2000 183 350 1.9E-42 T 11-10-2018 AL543_18775 dc4b224c9a953052d8ac533a58fcdab7 400 SUPERFAMILY SSF53756 7 372 1.53E-72 T 11-10-2018 AL543_18775 dc4b224c9a953052d8ac533a58fcdab7 400 Pfam PF13439 Glycosyltransferase Family 4 19 176 6.3E-18 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AL543_18775 dc4b224c9a953052d8ac533a58fcdab7 400 Pfam PF00534 Glycosyl transferases group 1 186 343 2.5E-33 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AL543_18775 dc4b224c9a953052d8ac533a58fcdab7 400 Gene3D G3DSA:3.40.50.2000 7 182 1.9E-17 T 11-10-2018 AL543_18835 313a76b9392f6076e9da8edf75be657f 231 SMART SM00934 5 226 1.4E-101 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL543_18835 313a76b9392f6076e9da8edf75be657f 231 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 3 231 40.053 T 11-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL543_18835 313a76b9392f6076e9da8edf75be657f 231 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 222 5.6E-52 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL543_18835 313a76b9392f6076e9da8edf75be657f 231 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 57 70 - T 11-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL543_18835 313a76b9392f6076e9da8edf75be657f 231 Gene3D G3DSA:3.20.20.70 1 230 3.7E-88 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_18835 313a76b9392f6076e9da8edf75be657f 231 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 6 226 3.6E-57 T 11-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL543_18835 313a76b9392f6076e9da8edf75be657f 231 SUPERFAMILY SSF51366 2 227 7.23E-77 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AL543_08525 12dcf071214842eb026bb0ccc0cef075 296 Hamap MF_00117 33 kDa chaperonin [hslO]. 8 288 32.847 T 11-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 AL543_08525 12dcf071214842eb026bb0ccc0cef075 296 SUPERFAMILY SSF118352 229 286 5.76E-19 T 11-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 AL543_08525 12dcf071214842eb026bb0ccc0cef075 296 Gene3D G3DSA:1.10.287.480 182 229 8.5E-22 T 11-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily AL543_08525 12dcf071214842eb026bb0ccc0cef075 296 Gene3D G3DSA:3.90.1280.10 230 287 1.2E-21 T 11-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 AL543_08525 12dcf071214842eb026bb0ccc0cef075 296 Pfam PF01430 Hsp33 protein 11 277 1.9E-81 T 11-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 AL543_08525 12dcf071214842eb026bb0ccc0cef075 296 PIRSF PIRSF005261 1 288 6.0E-71 T 11-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 AL543_08525 12dcf071214842eb026bb0ccc0cef075 296 SUPERFAMILY SSF64397 8 236 6.8E-76 T 11-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 AL543_08525 12dcf071214842eb026bb0ccc0cef075 296 Gene3D G3DSA:3.55.30.10 4 180 9.4E-63 T 11-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 AL543_08045 5a4b8f039fa9add5fc81721dd439d807 243 Pfam PF08534 Redoxin 5 160 7.2E-33 T 11-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AL543_08045 5a4b8f039fa9add5fc81721dd439d807 243 PRINTS PR00160 Glutaredoxin signature 228 241 4.2E-15 T 11-10-2018 IPR014025 Glutaredoxin subgroup AL543_08045 5a4b8f039fa9add5fc81721dd439d807 243 PRINTS PR00160 Glutaredoxin signature 173 191 4.2E-15 T 11-10-2018 IPR014025 Glutaredoxin subgroup AL543_08045 5a4b8f039fa9add5fc81721dd439d807 243 PRINTS PR00160 Glutaredoxin signature 214 227 4.2E-15 T 11-10-2018 IPR014025 Glutaredoxin subgroup AL543_08045 5a4b8f039fa9add5fc81721dd439d807 243 Pfam PF00462 Glutaredoxin 173 231 1.8E-18 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AL543_08045 5a4b8f039fa9add5fc81721dd439d807 243 Gene3D G3DSA:3.40.30.10 4 165 2.5E-63 T 11-10-2018 AL543_08045 5a4b8f039fa9add5fc81721dd439d807 243 ProSitePatterns PS00195 Glutaredoxin active site. 175 191 - T 11-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 AL543_08045 5a4b8f039fa9add5fc81721dd439d807 243 TIGRFAM TIGR02190 GlrX-dom: glutaredoxin-family domain 164 241 4.3E-39 T 11-10-2018 IPR011906 Glutaredoxin domain KEGG: 00480+1.11.1.15 AL543_08045 5a4b8f039fa9add5fc81721dd439d807 243 SUPERFAMILY SSF52833 2 241 4.66E-49 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL543_08045 5a4b8f039fa9add5fc81721dd439d807 243 Gene3D G3DSA:3.40.30.10 171 241 6.7E-24 T 11-10-2018 AL543_00690 50183c7fd0a6a2a2fe8ed2da12287990 157 Gene3D G3DSA:1.10.10.10 2 154 3.0E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_00690 50183c7fd0a6a2a2fe8ed2da12287990 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 80 95 1.1E-5 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL543_00690 50183c7fd0a6a2a2fe8ed2da12287990 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 99 115 1.1E-5 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL543_00690 50183c7fd0a6a2a2fe8ed2da12287990 157 SUPERFAMILY SSF46785 5 153 2.02E-32 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_00690 50183c7fd0a6a2a2fe8ed2da12287990 157 Pfam PF01047 MarR family 43 104 1.8E-11 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL543_00690 50183c7fd0a6a2a2fe8ed2da12287990 157 SMART SM00347 36 139 7.4E-22 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL543_00690 50183c7fd0a6a2a2fe8ed2da12287990 157 ProSitePatterns PS01117 MarR-type HTH domain signature. 78 112 - T 11-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AL543_10900 e7c5a46bfe4c3264e7058a488094437b 124 Gene3D G3DSA:2.40.50.140 1 124 3.5E-63 T 11-10-2018 AL543_10900 e7c5a46bfe4c3264e7058a488094437b 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 2.5E-70 T 11-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_10900 e7c5a46bfe4c3264e7058a488094437b 124 PIRSF PIRSF002133 1 124 9.1E-54 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_10900 e7c5a46bfe4c3264e7058a488094437b 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.557 T 11-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_10900 e7c5a46bfe4c3264e7058a488094437b 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 7.1E-60 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_10900 e7c5a46bfe4c3264e7058a488094437b 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 7.1E-60 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_10900 e7c5a46bfe4c3264e7058a488094437b 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 7.1E-60 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_10900 e7c5a46bfe4c3264e7058a488094437b 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 7.1E-60 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_10900 e7c5a46bfe4c3264e7058a488094437b 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 7.1E-60 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_10900 e7c5a46bfe4c3264e7058a488094437b 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 7.1E-60 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_10900 e7c5a46bfe4c3264e7058a488094437b 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_10900 e7c5a46bfe4c3264e7058a488094437b 124 Pfam PF00164 Ribosomal protein S12/S23 12 123 2.2E-42 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_10900 e7c5a46bfe4c3264e7058a488094437b 124 SUPERFAMILY SSF50249 3 123 1.03E-51 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL543_13165 98c6ce4de2de5628145ba9128d41b8d6 529 SUPERFAMILY SSF56349 212 509 3.24E-38 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL543_13165 98c6ce4de2de5628145ba9128d41b8d6 529 Gene3D G3DSA:1.10.150.130 205 324 5.9E-7 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AL543_13165 98c6ce4de2de5628145ba9128d41b8d6 529 Pfam PF00589 Phage integrase family 327 508 1.8E-19 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL543_13165 98c6ce4de2de5628145ba9128d41b8d6 529 Gene3D G3DSA:1.10.443.10 325 518 2.6E-24 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AL543_10920 4acc9b1b85749a67deaae4e04fcc7050 62 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 52 8.7E-14 T 11-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain AL543_10920 4acc9b1b85749a67deaae4e04fcc7050 62 Gene3D G3DSA:1.10.10.1100 1 57 7.5E-19 T 11-10-2018 AL543_10750 0d12bb3bff506edadccf442a1c7dc1a9 295 SUPERFAMILY SSF103481 36 140 4.45E-9 T 11-10-2018 AL543_10750 0d12bb3bff506edadccf442a1c7dc1a9 295 Pfam PF00892 EamA-like transporter family 4 135 1.4E-14 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL543_10750 0d12bb3bff506edadccf442a1c7dc1a9 295 Pfam PF00892 EamA-like transporter family 157 294 3.3E-16 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL543_10750 0d12bb3bff506edadccf442a1c7dc1a9 295 SUPERFAMILY SSF103481 216 294 1.15E-9 T 11-10-2018 AL543_08245 4d917d7844f35f8f538534edc4fd2a2f 425 SMART SM00919 173 409 2.2E-135 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AL543_08245 4d917d7844f35f8f538534edc4fd2a2f 425 ProSitePatterns PS00331 Malic enzymes signature. 169 185 - T 11-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 AL543_08245 4d917d7844f35f8f538534edc4fd2a2f 425 Pfam PF00390 Malic enzyme, N-terminal domain 35 160 9.4E-27 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AL543_08245 4d917d7844f35f8f538534edc4fd2a2f 425 Gene3D G3DSA:3.40.50.720 171 425 2.7E-81 T 11-10-2018 AL543_08245 4d917d7844f35f8f538534edc4fd2a2f 425 Pfam PF03949 Malic enzyme, NAD binding domain 175 366 6.5E-25 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AL543_08245 4d917d7844f35f8f538534edc4fd2a2f 425 SMART SM01274 28 161 9.5E-72 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AL543_08245 4d917d7844f35f8f538534edc4fd2a2f 425 PIRSF PIRSF000106 53 125 9.2E-11 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AL543_08245 4d917d7844f35f8f538534edc4fd2a2f 425 PIRSF PIRSF000106 120 425 1.9E-60 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AL543_08245 4d917d7844f35f8f538534edc4fd2a2f 425 SUPERFAMILY SSF53223 20 171 3.81E-51 T 11-10-2018 AL543_08245 4d917d7844f35f8f538534edc4fd2a2f 425 SUPERFAMILY SSF51735 173 421 5.22E-79 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_08245 4d917d7844f35f8f538534edc4fd2a2f 425 Gene3D G3DSA:3.40.50.10380 8 170 1.5E-65 T 11-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 AL543_11600 ddbb489641fdec971a9afecf2250c165 385 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 234 370 3.1E-69 T 11-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL543_11600 ddbb489641fdec971a9afecf2250c165 385 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 5 102 3.3E-43 T 11-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL543_11600 ddbb489641fdec971a9afecf2250c165 385 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 117 127 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL543_11600 ddbb489641fdec971a9afecf2250c165 385 SUPERFAMILY SSF55973 4 110 1.88E-47 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL543_11600 ddbb489641fdec971a9afecf2250c165 385 Gene3D G3DSA:3.30.300.10 6 234 3.5E-180 T 11-10-2018 AL543_11600 ddbb489641fdec971a9afecf2250c165 385 PIRSF PIRSF000497 1 382 3.2E-175 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL543_11600 ddbb489641fdec971a9afecf2250c165 385 Gene3D G3DSA:3.30.300.10 104 373 3.5E-180 T 11-10-2018 AL543_11600 ddbb489641fdec971a9afecf2250c165 385 Pfam PF02772 S-adenosylmethionine synthetase, central domain 115 232 5.9E-46 T 11-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL543_11600 ddbb489641fdec971a9afecf2250c165 385 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 382 59.15 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL543_11600 ddbb489641fdec971a9afecf2250c165 385 SUPERFAMILY SSF55973 112 233 1.57E-52 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL543_11600 ddbb489641fdec971a9afecf2250c165 385 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 379 1.1E-198 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL543_11600 ddbb489641fdec971a9afecf2250c165 385 Gene3D G3DSA:3.30.300.10 12 271 3.5E-180 T 11-10-2018 AL543_11600 ddbb489641fdec971a9afecf2250c165 385 SUPERFAMILY SSF55973 234 383 1.49E-70 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL543_11600 ddbb489641fdec971a9afecf2250c165 385 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 260 268 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL543_11680 b9b1205ce0d2d7005c6996a73522ee3d 359 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 38 324 2.8E-74 T 11-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 AL543_11680 b9b1205ce0d2d7005c6996a73522ee3d 359 Gene3D G3DSA:3.40.190.170 37 346 8.1E-117 T 11-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily AL543_11680 b9b1205ce0d2d7005c6996a73522ee3d 359 PIRSF PIRSF039026 1 358 3.5E-132 T 11-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like AL543_11680 b9b1205ce0d2d7005c6996a73522ee3d 359 Gene3D G3DSA:3.40.190.10 154 325 8.1E-117 T 11-10-2018 AL543_05795 123d6b545b2fed8ddce5876286aca9fc 278 PIRSF PIRSF006625 1 278 1.9E-135 T 11-10-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 AL543_05795 123d6b545b2fed8ddce5876286aca9fc 278 Gene3D G3DSA:2.60.120.520 30 144 3.5E-121 T 11-10-2018 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 AL543_05795 123d6b545b2fed8ddce5876286aca9fc 278 Pfam PF04962 KduI/IolB family 70 273 1.7E-35 T 11-10-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 AL543_05795 123d6b545b2fed8ddce5876286aca9fc 278 SUPERFAMILY SSF51182 1 262 3.56E-107 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AL543_05795 123d6b545b2fed8ddce5876286aca9fc 278 Gene3D G3DSA:2.60.120.10 10 264 3.5E-121 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL543_05795 123d6b545b2fed8ddce5876286aca9fc 278 Hamap MF_00687 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [kduI]. 1 278 56.047 T 11-10-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 AL543_19545 2eb23b68bbe5fbe4ee19c2a6760b3afb 194 SUPERFAMILY SSF46609 1 84 2.36E-35 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL543_19545 2eb23b68bbe5fbe4ee19c2a6760b3afb 194 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 82 1.4E-34 T 11-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL543_19545 2eb23b68bbe5fbe4ee19c2a6760b3afb 194 Gene3D G3DSA:1.10.287.990 20 82 1.4E-25 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL543_19545 2eb23b68bbe5fbe4ee19c2a6760b3afb 194 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 1.4E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL543_19545 2eb23b68bbe5fbe4ee19c2a6760b3afb 194 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.4E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL543_19545 2eb23b68bbe5fbe4ee19c2a6760b3afb 194 PRINTS PR01703 Manganese superoxide dismutase signature 156 168 1.4E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL543_19545 2eb23b68bbe5fbe4ee19c2a6760b3afb 194 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.4E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL543_19545 2eb23b68bbe5fbe4ee19c2a6760b3afb 194 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 1.4E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL543_19545 2eb23b68bbe5fbe4ee19c2a6760b3afb 194 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 190 2.4E-37 T 11-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL543_19545 2eb23b68bbe5fbe4ee19c2a6760b3afb 194 Gene3D G3DSA:2.40.500.20 83 194 8.0E-42 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL543_19545 2eb23b68bbe5fbe4ee19c2a6760b3afb 194 SUPERFAMILY SSF54719 84 193 8.25E-43 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL543_19545 2eb23b68bbe5fbe4ee19c2a6760b3afb 194 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 158 165 - T 11-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL543_19545 2eb23b68bbe5fbe4ee19c2a6760b3afb 194 PIRSF PIRSF000349 1 194 2.2E-83 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL543_08500 37f888942b3027e157d92cd52de746fb 406 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 403 4.8E-159 T 11-10-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 AL543_08500 37f888942b3027e157d92cd52de746fb 406 Gene3D G3DSA:1.20.81.30 55 173 8.2E-38 T 11-10-2018 AL543_08500 37f888942b3027e157d92cd52de746fb 406 Gene3D G3DSA:1.20.81.30 258 369 1.3E-25 T 11-10-2018 AL543_08500 37f888942b3027e157d92cd52de746fb 406 Pfam PF00482 Type II secretion system (T2SS), protein F 274 396 1.1E-24 T 11-10-2018 IPR018076 Type II secretion system F domain AL543_08500 37f888942b3027e157d92cd52de746fb 406 Pfam PF00482 Type II secretion system (T2SS), protein F 72 194 4.1E-33 T 11-10-2018 IPR018076 Type II secretion system F domain AL543_08500 37f888942b3027e157d92cd52de746fb 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 2.2E-38 T 11-10-2018 IPR003004 GspF/PilC family AL543_08500 37f888942b3027e157d92cd52de746fb 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 2.2E-38 T 11-10-2018 IPR003004 GspF/PilC family AL543_08500 37f888942b3027e157d92cd52de746fb 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 2.2E-38 T 11-10-2018 IPR003004 GspF/PilC family AL543_08500 37f888942b3027e157d92cd52de746fb 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 2.2E-38 T 11-10-2018 IPR003004 GspF/PilC family AL543_08500 37f888942b3027e157d92cd52de746fb 406 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 166 194 - T 11-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 AL543_01850 9792ad3a5be2fc74a3b27130a10ad5a6 82 Pfam PF11730 Protein of unknown function (DUF3297) 11 81 1.1E-36 T 11-10-2018 IPR021724 Protein of unknown function DUF3297 AL543_00575 550114c580ebb779e699d8868db4408c 311 Gene3D G3DSA:3.40.630.10 5 309 7.6E-119 T 11-10-2018 AL543_00575 550114c580ebb779e699d8868db4408c 311 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 79 177 2.9E-7 T 11-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 AL543_00575 550114c580ebb779e699d8868db4408c 311 SUPERFAMILY SSF53187 37 293 7.28E-37 T 11-10-2018 AL543_08105 15fc2e1454324c9bbcfaac44cc1da1d7 156 Hamap MF_00821 Protein-export protein SecB [secB]. 1 146 32.416 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AL543_08105 15fc2e1454324c9bbcfaac44cc1da1d7 156 Gene3D G3DSA:3.10.420.10 2 153 2.3E-58 T 11-10-2018 IPR035958 SecB-like superfamily AL543_08105 15fc2e1454324c9bbcfaac44cc1da1d7 156 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 9 146 9.9E-59 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AL543_08105 15fc2e1454324c9bbcfaac44cc1da1d7 156 Pfam PF02556 Preprotein translocase subunit SecB 6 145 1.7E-55 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AL543_08105 15fc2e1454324c9bbcfaac44cc1da1d7 156 SUPERFAMILY SSF54611 4 142 2.03E-51 T 11-10-2018 IPR035958 SecB-like superfamily AL543_08105 15fc2e1454324c9bbcfaac44cc1da1d7 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 98 120 4.3E-39 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AL543_08105 15fc2e1454324c9bbcfaac44cc1da1d7 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 14 31 4.3E-39 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AL543_08105 15fc2e1454324c9bbcfaac44cc1da1d7 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 74 94 4.3E-39 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AL543_08105 15fc2e1454324c9bbcfaac44cc1da1d7 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 124 142 4.3E-39 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AL543_07760 90365e36d6492479be76ae081424fd93 167 ProSitePatterns PS00585 Ribosomal protein S5 signature. 29 61 - T 11-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site AL543_07760 90365e36d6492479be76ae081424fd93 167 Gene3D G3DSA:3.30.230.10 75 167 5.2E-36 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL543_07760 90365e36d6492479be76ae081424fd93 167 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 164 34.523 T 11-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 AL543_07760 90365e36d6492479be76ae081424fd93 167 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 9.5E-69 T 11-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 AL543_07760 90365e36d6492479be76ae081424fd93 167 Gene3D G3DSA:3.30.160.20 2 74 2.0E-31 T 11-10-2018 AL543_07760 90365e36d6492479be76ae081424fd93 167 Pfam PF03719 Ribosomal protein S5, C-terminal domain 88 158 1.9E-29 T 11-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 AL543_07760 90365e36d6492479be76ae081424fd93 167 Pfam PF00333 Ribosomal protein S5, N-terminal domain 12 75 7.3E-29 T 11-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 AL543_07760 90365e36d6492479be76ae081424fd93 167 SUPERFAMILY SSF54211 80 159 6.57E-27 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL543_07760 90365e36d6492479be76ae081424fd93 167 SUPERFAMILY SSF54768 8 76 1.36E-23 T 11-10-2018 AL543_12365 7d3165d1a889df1599385bd5de966fb1 303 SMART SM00028 134 167 220.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL543_12365 7d3165d1a889df1599385bd5de966fb1 303 SMART SM00028 237 270 38.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL543_12365 7d3165d1a889df1599385bd5de966fb1 303 SMART SM00028 66 99 0.68 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL543_12365 7d3165d1a889df1599385bd5de966fb1 303 SMART SM00028 100 133 0.0014 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL543_12365 7d3165d1a889df1599385bd5de966fb1 303 Gene3D G3DSA:1.25.40.10 27 294 1.0E-79 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_12365 7d3165d1a889df1599385bd5de966fb1 303 SUPERFAMILY SSF48452 34 286 1.16E-65 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_12365 7d3165d1a889df1599385bd5de966fb1 303 PIRSF PIRSF004654 1 294 8.6E-87 T 11-10-2018 IPR023605 Lipoprotein NlpI AL543_09700 1ac494025e922ebb4b99ea7b9263f46b 474 Pfam PF13746 4Fe-4S dicluster domain 223 327 3.8E-41 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL543_09700 1ac494025e922ebb4b99ea7b9263f46b 474 SUPERFAMILY SSF54862 108 350 2.51E-31 T 11-10-2018 AL543_09700 1ac494025e922ebb4b99ea7b9263f46b 474 Gene3D G3DSA:3.30.70.20 221 293 4.8E-5 T 11-10-2018 AL543_09700 1ac494025e922ebb4b99ea7b9263f46b 474 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 44 472 8.6E-175 T 11-10-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 AL543_09700 1ac494025e922ebb4b99ea7b9263f46b 474 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 275 286 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL543_09700 1ac494025e922ebb4b99ea7b9263f46b 474 Pfam PF12801 4Fe-4S binding domain 98 137 1.0E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL543_09700 1ac494025e922ebb4b99ea7b9263f46b 474 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 359 471 1.3E-29 T 11-10-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain AL543_09700 1ac494025e922ebb4b99ea7b9263f46b 474 Gene3D G3DSA:2.60.40.10 358 474 2.6E-45 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL543_00850 10a328a92807c3f98faa0cd50540c52a 518 SUPERFAMILY SSF58104 261 517 2.09E-72 T 11-10-2018 AL543_00850 10a328a92807c3f98faa0cd50540c52a 518 Gene3D G3DSA:3.30.450.20 8 116 3.1E-22 T 11-10-2018 AL543_00850 10a328a92807c3f98faa0cd50540c52a 518 Pfam PF08447 PAS fold 32 114 1.1E-19 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 AL543_00850 10a328a92807c3f98faa0cd50540c52a 518 Gene3D G3DSA:1.10.287.950 188 517 1.9E-66 T 11-10-2018 AL543_00850 10a328a92807c3f98faa0cd50540c52a 518 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 300 483 2.1E-43 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_00850 10a328a92807c3f98faa0cd50540c52a 518 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 24 111 4.1E-11 T 11-10-2018 IPR000014 PAS domain AL543_00850 10a328a92807c3f98faa0cd50540c52a 518 SMART SM00283 255 516 4.4E-73 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_00850 10a328a92807c3f98faa0cd50540c52a 518 SUPERFAMILY SSF55785 23 114 8.86E-24 T 11-10-2018 IPR035965 PAS domain superfamily AL543_08240 825609e1d4784817f857d221c09dfb07 72 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 67 1.7E-34 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_08240 825609e1d4784817f857d221c09dfb07 72 SUPERFAMILY SSF143800 1 68 1.06E-26 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_08240 825609e1d4784817f857d221c09dfb07 72 ProSitePatterns PS01143 Ribosomal protein L31 signature. 36 57 - T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_08240 825609e1d4784817f857d221c09dfb07 72 Pfam PF01197 Ribosomal protein L31 1 66 1.1E-30 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_08240 825609e1d4784817f857d221c09dfb07 72 PRINTS PR01249 Ribosomal protein L31 signature 2 19 5.3E-22 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_08240 825609e1d4784817f857d221c09dfb07 72 PRINTS PR01249 Ribosomal protein L31 signature 32 47 5.3E-22 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_08240 825609e1d4784817f857d221c09dfb07 72 PRINTS PR01249 Ribosomal protein L31 signature 47 65 5.3E-22 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_08240 825609e1d4784817f857d221c09dfb07 72 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 69 31.658 T 11-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_08240 825609e1d4784817f857d221c09dfb07 72 Gene3D G3DSA:2.30.170.50 1 71 1.4E-31 T 11-10-2018 AL543_00970 61d3b36eed221f9132b7466aa3fd35bc 199 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 2 197 1.9E-91 T 11-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 AL543_00970 61d3b36eed221f9132b7466aa3fd35bc 199 Pfam PF03358 NADPH-dependent FMN reductase 3 141 7.4E-13 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AL543_00970 61d3b36eed221f9132b7466aa3fd35bc 199 Hamap MF_01017 NAD(P)H dehydrogenase (quinone). 1 199 46.185 T 11-10-2018 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 AL543_00970 61d3b36eed221f9132b7466aa3fd35bc 199 Gene3D G3DSA:3.40.50.360 1 198 9.4E-74 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL543_00970 61d3b36eed221f9132b7466aa3fd35bc 199 SUPERFAMILY SSF52218 1 197 8.52E-61 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL543_08480 fbc754ef1275f3525a7a900ebe78f3bd 221 Pfam PF07963 Prokaryotic N-terminal methylation motif 12 36 2.0E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL543_08480 fbc754ef1275f3525a7a900ebe78f3bd 221 Gene3D G3DSA:3.10.610.10 45 158 1.5E-33 T 11-10-2018 AL543_08480 fbc754ef1275f3525a7a900ebe78f3bd 221 Pfam PF11612 Type II secretion system (T2SS), protein J 66 203 3.8E-40 T 11-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 AL543_08480 fbc754ef1275f3525a7a900ebe78f3bd 221 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 14 36 1.1E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL543_08480 fbc754ef1275f3525a7a900ebe78f3bd 221 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 14 205 7.1E-95 T 11-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 AL543_08480 fbc754ef1275f3525a7a900ebe78f3bd 221 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 14 34 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL543_08480 fbc754ef1275f3525a7a900ebe78f3bd 221 Gene3D G3DSA:2.10.70.20 160 209 5.0E-18 T 11-10-2018 AL543_08480 fbc754ef1275f3525a7a900ebe78f3bd 221 SUPERFAMILY SSF54523 47 209 1.92E-55 T 11-10-2018 AL543_00750 bceae392ec1756ee10f11e6fdd33cb58 95 Pfam PF06865 Protein of unknown function (DUF1255) 3 92 8.2E-36 T 11-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 AL543_00750 bceae392ec1756ee10f11e6fdd33cb58 95 SUPERFAMILY SSF51182 1 93 2.49E-35 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AL543_00750 bceae392ec1756ee10f11e6fdd33cb58 95 Hamap MF_01537 Pyrimidine/purine nucleoside phosphorylase [ppnP]. 1 93 25.745 T 11-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 AL543_00750 bceae392ec1756ee10f11e6fdd33cb58 95 Gene3D G3DSA:2.60.120.10 1 93 1.5E-36 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL543_15845 d00df2eeebcfd1fccde98b30ec0bf50d 122 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 6 98 4.2E-33 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 AL543_15845 d00df2eeebcfd1fccde98b30ec0bf50d 122 SUPERFAMILY SSF55620 1 121 2.0E-42 T 11-10-2018 AL543_15845 d00df2eeebcfd1fccde98b30ec0bf50d 122 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 7 122 1.4E-35 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 AL543_15845 d00df2eeebcfd1fccde98b30ec0bf50d 122 PIRSF PIRSF006113 2 122 2.9E-53 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 AL543_15845 d00df2eeebcfd1fccde98b30ec0bf50d 122 Gene3D G3DSA:3.30.479.10 2 122 4.4E-50 T 11-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 AL543_17455 4b1518efbb7a62c544b3663ab2053141 462 Gene3D G3DSA:3.30.565.10 315 457 6.4E-26 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_17455 4b1518efbb7a62c544b3663ab2053141 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 431 4.9E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_17455 4b1518efbb7a62c544b3663ab2053141 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 382 396 4.9E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_17455 4b1518efbb7a62c544b3663ab2053141 462 Gene3D G3DSA:1.10.287.130 190 295 2.8E-8 T 11-10-2018 AL543_17455 4b1518efbb7a62c544b3663ab2053141 462 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 350 451 2.8E-9 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_17455 4b1518efbb7a62c544b3663ab2053141 462 SMART SM00387 346 453 3.8E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_17455 4b1518efbb7a62c544b3663ab2053141 462 SUPERFAMILY SSF55874 317 449 7.2E-23 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_17455 4b1518efbb7a62c544b3663ab2053141 462 SUPERFAMILY SSF47384 227 293 8.83E-6 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL543_18850 7c1a97ecb913724e7b3644d835826b4e 92 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 91 4.4E-48 T 11-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 AL543_18850 7c1a97ecb913724e7b3644d835826b4e 92 Gene3D G3DSA:4.10.520.10 40 92 2.5E-29 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AL543_18850 7c1a97ecb913724e7b3644d835826b4e 92 Gene3D G3DSA:4.10.520.10 2 39 2.2E-11 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AL543_18850 7c1a97ecb913724e7b3644d835826b4e 92 Pfam PF00216 Bacterial DNA-binding protein 1 91 4.4E-31 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL543_18850 7c1a97ecb913724e7b3644d835826b4e 92 SUPERFAMILY SSF47729 1 91 3.39E-30 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AL543_18850 7c1a97ecb913724e7b3644d835826b4e 92 SMART SM00411 1 91 5.9E-44 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL543_18850 7c1a97ecb913724e7b3644d835826b4e 92 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.7E-18 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL543_18850 7c1a97ecb913724e7b3644d835826b4e 92 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.7E-18 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL543_18850 7c1a97ecb913724e7b3644d835826b4e 92 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.7E-18 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL543_18850 7c1a97ecb913724e7b3644d835826b4e 92 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 92 30.229 T 11-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 AL543_18850 7c1a97ecb913724e7b3644d835826b4e 92 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AL543_06010 d007a1c21c718a9a38552095bf1c0bf0 692 Gene3D G3DSA:3.20.20.80 439 661 5.1E-38 T 11-10-2018 AL543_06010 d007a1c21c718a9a38552095bf1c0bf0 692 PIRSF PIRSF036917 1 692 0.0 T 11-10-2018 IPR014635 Alpha-amylase, MalS type GO:0004556|GO:0005509|GO:0030980|GO:0042597|GO:0051692 KEGG: 00500+3.2.1.1 AL543_06010 d007a1c21c718a9a38552095bf1c0bf0 692 SMART SM00642 212 654 2.2E-94 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL543_06010 d007a1c21c718a9a38552095bf1c0bf0 692 Gene3D G3DSA:3.20.20.80 195 429 9.2E-54 T 11-10-2018 AL543_06010 d007a1c21c718a9a38552095bf1c0bf0 692 Pfam PF00128 Alpha amylase, catalytic domain 245 614 8.1E-50 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL543_06010 d007a1c21c718a9a38552095bf1c0bf0 692 SUPERFAMILY SSF51445 188 663 1.3E-87 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AL543_04440 05c742f8b4726f0dc267133d46bcdf81 412 SMART SM00267 227 411 1.2E-34 T 11-10-2018 IPR000160 GGDEF domain AL543_04440 05c742f8b4726f0dc267133d46bcdf81 412 Gene3D G3DSA:3.30.70.270 232 411 1.2E-43 T 11-10-2018 AL543_04440 05c742f8b4726f0dc267133d46bcdf81 412 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 236 410 1.2E-31 T 11-10-2018 IPR000160 GGDEF domain AL543_04440 05c742f8b4726f0dc267133d46bcdf81 412 Pfam PF00990 Diguanylate cyclase, GGDEF domain 363 406 9.5E-7 T 11-10-2018 IPR000160 GGDEF domain AL543_04440 05c742f8b4726f0dc267133d46bcdf81 412 Pfam PF00990 Diguanylate cyclase, GGDEF domain 239 339 9.4E-22 T 11-10-2018 IPR000160 GGDEF domain AL543_04440 05c742f8b4726f0dc267133d46bcdf81 412 SUPERFAMILY SSF55073 243 410 2.98E-33 T 11-10-2018 IPR029787 Nucleotide cyclase AL543_15795 1d31110b22ee8815a68cb6a020abe001 545 SUPERFAMILY SSF74650 72 442 5.65E-163 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 AL543_15795 1d31110b22ee8815a68cb6a020abe001 545 PIRSF PIRSF006281 26 545 5.3E-210 T 11-10-2018 IPR014438 Glucan biosynthesis protein MdoG/MdoD AL543_15795 1d31110b22ee8815a68cb6a020abe001 545 Gene3D G3DSA:2.70.98.10 71 444 3.0E-165 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AL543_15795 1d31110b22ee8815a68cb6a020abe001 545 Hamap MF_01069 Glucans biosynthesis protein G [mdoG]. 22 545 55.943 T 11-10-2018 IPR023704 Glucan biosynthesis protein G AL543_15795 1d31110b22ee8815a68cb6a020abe001 545 SUPERFAMILY SSF81296 448 544 4.48E-17 T 11-10-2018 IPR014756 Immunoglobulin E-set AL543_15795 1d31110b22ee8815a68cb6a020abe001 545 Gene3D G3DSA:2.60.40.10 447 545 4.5E-9 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL543_15795 1d31110b22ee8815a68cb6a020abe001 545 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 72 543 1.1E-193 T 11-10-2018 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 AL543_07105 0d9230a813a086920fc056c5cbdf7f8d 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 133.596 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AL543_07105 0d9230a813a086920fc056c5cbdf7f8d 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 7.2E-106 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AL543_07105 0d9230a813a086920fc056c5cbdf7f8d 243 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 238 5.2E-99 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AL543_07105 0d9230a813a086920fc056c5cbdf7f8d 243 SUPERFAMILY SSF63892 4 241 6.54E-102 T 11-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AL543_07105 0d9230a813a086920fc056c5cbdf7f8d 243 Gene3D G3DSA:3.20.20.70 1 243 4.7E-109 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_14615 8f2837798f3db9bb21e42477859cb207 262 SUPERFAMILY SSF100950 74 234 1.84E-33 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AL543_14615 8f2837798f3db9bb21e42477859cb207 262 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 1.4E-12 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL543_14615 8f2837798f3db9bb21e42477859cb207 262 SMART SM01134 73 233 5.2E-68 T 11-10-2018 AL543_14615 8f2837798f3db9bb21e42477859cb207 262 SUPERFAMILY SSF46785 5 70 5.65E-11 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_14615 8f2837798f3db9bb21e42477859cb207 262 SMART SM00420 6 58 3.2E-9 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL543_14615 8f2837798f3db9bb21e42477859cb207 262 Pfam PF00455 DeoR C terminal sensor domain 75 232 1.0E-50 T 11-10-2018 IPR014036 DeoR C-terminal sensor domain AL543_12950 78e5136264ef424b9dd5cd3e63b47b4f 188 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 16 149 7.2E-65 T 11-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 AL543_12950 78e5136264ef424b9dd5cd3e63b47b4f 188 SUPERFAMILY SSF46785 17 146 2.78E-35 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_12950 78e5136264ef424b9dd5cd3e63b47b4f 188 Gene3D G3DSA:1.10.10.10 16 159 5.1E-53 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_12950 78e5136264ef424b9dd5cd3e63b47b4f 188 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 64 82 - T 11-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site AL543_12950 78e5136264ef424b9dd5cd3e63b47b4f 188 Hamap MF_01176 HTH-type transcriptional regulator IscR [iscR]. 16 188 49.451 T 11-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 AL543_12950 78e5136264ef424b9dd5cd3e63b47b4f 188 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 16 145 1.8E-46 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type AL543_12950 78e5136264ef424b9dd5cd3e63b47b4f 188 Pfam PF02082 Transcriptional regulator 16 98 5.7E-27 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type AL543_10860 2209e3f90f6bbf771f54af3a3dab8628 67 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 11 65 4.6E-23 T 11-10-2018 IPR019201 Protein of unknown function DUF2065 AL543_13185 28d780e8b0c6b8ea7f9b01761cd9c761 303 Pfam PF03466 LysR substrate binding domain 98 300 1.5E-19 T 11-10-2018 IPR005119 LysR, substrate-binding AL543_13185 28d780e8b0c6b8ea7f9b01761cd9c761 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 1.1E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_13185 28d780e8b0c6b8ea7f9b01761cd9c761 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 7.2E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_13185 28d780e8b0c6b8ea7f9b01761cd9c761 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 7.2E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_13185 28d780e8b0c6b8ea7f9b01761cd9c761 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 7.2E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_13185 28d780e8b0c6b8ea7f9b01761cd9c761 303 Gene3D G3DSA:3.40.190.10 91 297 1.3E-47 T 11-10-2018 AL543_13185 28d780e8b0c6b8ea7f9b01761cd9c761 303 SUPERFAMILY SSF46785 3 82 4.57E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_13185 28d780e8b0c6b8ea7f9b01761cd9c761 303 Gene3D G3DSA:1.10.10.10 2 89 1.6E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_13185 28d780e8b0c6b8ea7f9b01761cd9c761 303 SUPERFAMILY SSF53850 91 300 2.9E-37 T 11-10-2018 AL543_13185 28d780e8b0c6b8ea7f9b01761cd9c761 303 Gene3D G3DSA:3.40.190.10 174 272 1.3E-47 T 11-10-2018 AL543_16565 9866d9d0039d60f1cc1fb2d6261b880b 286 SUPERFAMILY SSF161098 10 275 1.83E-54 T 11-10-2018 IPR035906 MetI-like superfamily AL543_16565 9866d9d0039d60f1cc1fb2d6261b880b 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 283 3.6E-18 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL543_16565 9866d9d0039d60f1cc1fb2d6261b880b 286 Gene3D G3DSA:1.10.3720.10 7 278 3.2E-54 T 11-10-2018 IPR035906 MetI-like superfamily AL543_12980 f2b68c475f8e7119da7374507ce36953 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 110 5.2E-62 T 11-10-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 AL543_12980 f2b68c475f8e7119da7374507ce36953 112 SUPERFAMILY SSF54292 4 107 1.28E-33 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AL543_12980 f2b68c475f8e7119da7374507ce36953 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 12 91 3.5E-15 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL543_12980 f2b68c475f8e7119da7374507ce36953 112 Gene3D G3DSA:3.10.20.30 1 112 2.2E-36 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AL543_12980 f2b68c475f8e7119da7374507ce36953 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 11-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AL543_12980 f2b68c475f8e7119da7374507ce36953 112 PRINTS PR00355 Adrenodoxin signature 42 52 5.7E-10 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AL543_12980 f2b68c475f8e7119da7374507ce36953 112 PRINTS PR00355 Adrenodoxin signature 83 91 5.7E-10 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AL543_12980 f2b68c475f8e7119da7374507ce36953 112 PRINTS PR00355 Adrenodoxin signature 60 74 5.7E-10 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AL543_15490 1a298179a6946b7b795c362b8a810fd5 457 Pfam PF00375 Sodium:dicarboxylate symporter family 30 441 1.0E-99 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL543_15490 1a298179a6946b7b795c362b8a810fd5 457 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 1.0E-28 T 11-10-2018 AL543_15490 1a298179a6946b7b795c362b8a810fd5 457 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 1.0E-28 T 11-10-2018 AL543_15490 1a298179a6946b7b795c362b8a810fd5 457 PRINTS PR00173 Glutamate-aspartate symporter signature 259 278 1.0E-28 T 11-10-2018 AL543_15490 1a298179a6946b7b795c362b8a810fd5 457 PRINTS PR00173 Glutamate-aspartate symporter signature 396 416 1.0E-28 T 11-10-2018 AL543_15490 1a298179a6946b7b795c362b8a810fd5 457 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 1.0E-28 T 11-10-2018 AL543_15490 1a298179a6946b7b795c362b8a810fd5 457 PRINTS PR00173 Glutamate-aspartate symporter signature 181 203 1.0E-28 T 11-10-2018 AL543_15490 1a298179a6946b7b795c362b8a810fd5 457 PRINTS PR00173 Glutamate-aspartate symporter signature 369 388 1.0E-28 T 11-10-2018 AL543_15490 1a298179a6946b7b795c362b8a810fd5 457 Gene3D G3DSA:1.10.3860.10 22 457 4.4E-100 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AL543_15490 1a298179a6946b7b795c362b8a810fd5 457 SUPERFAMILY SSF118215 29 441 4.18E-92 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AL543_14910 0c50548201528ae0b52a4391a5eca10c 268 Pfam PF07103 Protein of unknown function (DUF1365) 14 255 5.1E-69 T 11-10-2018 IPR010775 Protein of unknown function DUF1365 AL543_00710 c826fc88ae586d20e1280f6aa626eb8b 457 SMART SM00267 283 457 1.1E-45 T 11-10-2018 IPR000160 GGDEF domain AL543_00710 c826fc88ae586d20e1280f6aa626eb8b 457 SMART SM01079 45 223 4.1E-33 T 11-10-2018 IPR006189 CHASE domain AL543_00710 c826fc88ae586d20e1280f6aa626eb8b 457 Pfam PF00990 Diguanylate cyclase, GGDEF domain 295 451 4.2E-43 T 11-10-2018 IPR000160 GGDEF domain AL543_00710 c826fc88ae586d20e1280f6aa626eb8b 457 SUPERFAMILY SSF55073 299 456 1.88E-44 T 11-10-2018 IPR029787 Nucleotide cyclase AL543_00710 c826fc88ae586d20e1280f6aa626eb8b 457 Pfam PF03924 CHASE domain 109 221 3.4E-15 T 11-10-2018 IPR006189 CHASE domain AL543_00710 c826fc88ae586d20e1280f6aa626eb8b 457 Gene3D G3DSA:3.30.70.270 290 457 6.7E-52 T 11-10-2018 AL543_00710 c826fc88ae586d20e1280f6aa626eb8b 457 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 291 452 1.6E-46 T 11-10-2018 IPR000160 GGDEF domain AL543_06375 7acee63b0f3cb12b5a2bdf79095d1ded 144 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 7 140 5.7E-42 T 11-10-2018 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE AL543_06375 7acee63b0f3cb12b5a2bdf79095d1ded 144 SUPERFAMILY SSF82649 3 142 3.66E-46 T 11-10-2018 AL543_06375 7acee63b0f3cb12b5a2bdf79095d1ded 144 Gene3D G3DSA:3.90.1010.10 1 144 2.8E-47 T 11-10-2018 AL543_06375 7acee63b0f3cb12b5a2bdf79095d1ded 144 Pfam PF02657 Fe-S metabolism associated domain 21 139 1.0E-42 T 11-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like AL543_03870 085e8cae677288c2da8e25c379788cec 581 Pfam PF01553 Acyltransferase 65 195 3.6E-7 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AL543_03870 085e8cae677288c2da8e25c379788cec 581 SMART SM00563 75 198 3.8E-16 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AL543_03870 085e8cae677288c2da8e25c379788cec 581 SUPERFAMILY SSF69593 45 253 1.26E-13 T 11-10-2018 AL543_03870 085e8cae677288c2da8e25c379788cec 581 Pfam PF13444 Acetyltransferase (GNAT) domain 328 429 2.1E-20 T 11-10-2018 AL543_03870 085e8cae677288c2da8e25c379788cec 581 SUPERFAMILY SSF55729 310 457 5.3E-19 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL543_15615 4409dcc839ded8bd2f67c7e4283caf9b 318 Gene3D G3DSA:1.20.1630.10 8 236 4.4E-12 T 11-10-2018 AL543_15615 4409dcc839ded8bd2f67c7e4283caf9b 318 TIGRFAM TIGR03148 cyt_nit_nrfD: cytochrome c nitrite reductase, NrfD subunit 7 318 7.4E-143 T 11-10-2018 IPR017566 NrfD AL543_15615 4409dcc839ded8bd2f67c7e4283caf9b 318 Pfam PF03916 Polysulphide reductase, NrfD 7 317 1.9E-78 T 11-10-2018 IPR005614 NrfD family AL543_04965 66df02659b24aa887879e222f7d1bd79 172 Pfam PF13302 Acetyltransferase (GNAT) domain 7 144 4.4E-23 T 11-10-2018 IPR000182 GNAT domain AL543_04965 66df02659b24aa887879e222f7d1bd79 172 SUPERFAMILY SSF55729 2 166 8.19E-34 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL543_04965 66df02659b24aa887879e222f7d1bd79 172 Gene3D G3DSA:3.40.630.30 1 162 6.5E-31 T 11-10-2018 AL543_10100 d548061b8e08e0417a61d7b37671a174 261 SUPERFAMILY SSF52540 3 231 6.92E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_10100 d548061b8e08e0417a61d7b37671a174 261 Gene3D G3DSA:3.40.50.300 1 254 2.5E-61 T 11-10-2018 AL543_10100 d548061b8e08e0417a61d7b37671a174 261 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_10100 d548061b8e08e0417a61d7b37671a174 261 Pfam PF00005 ABC transporter 22 166 6.1E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_10100 d548061b8e08e0417a61d7b37671a174 261 SMART SM00382 26 214 5.4E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_12050 6b2ff26dc853ddb238accca74b6d7a84 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 67 5.4E-12 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL543_12050 6b2ff26dc853ddb238accca74b6d7a84 203 SUPERFAMILY SSF46689 9 85 1.75E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_12050 6b2ff26dc853ddb238accca74b6d7a84 203 SUPERFAMILY SSF48498 94 198 4.14E-8 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AL543_12050 6b2ff26dc853ddb238accca74b6d7a84 203 Gene3D G3DSA:1.10.357.10 1 203 8.1E-88 T 11-10-2018 AL543_12050 6b2ff26dc853ddb238accca74b6d7a84 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 1.0E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL543_12050 6b2ff26dc853ddb238accca74b6d7a84 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 1.0E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL543_02115 d286265bf951b01cb5254d638f432c3b 257 Pfam PF09850 Type VI secretion system protein DotU 39 240 1.8E-62 T 11-10-2018 IPR017732 Type IV / VI secretion system, DotU AL543_02115 d286265bf951b01cb5254d638f432c3b 257 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 37 246 7.3E-69 T 11-10-2018 IPR017732 Type IV / VI secretion system, DotU AL543_02115 d286265bf951b01cb5254d638f432c3b 257 Gene3D G3DSA:1.25.40.590 34 193 1.1E-60 T 11-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily AL543_15765 46c257530d02a48c08da3d38069c3f33 446 Pfam PF02378 Phosphotransferase system, EIIC 35 354 3.2E-65 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL543_15765 46c257530d02a48c08da3d38069c3f33 446 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 19 428 1.6E-112 T 11-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 AL543_15765 46c257530d02a48c08da3d38069c3f33 446 PIRSF PIRSF006351 7 438 1.8E-146 T 11-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 AL543_06805 e40d2c14f439be67ebdb04529d71fa9b 396 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 339 363 - T 11-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL543_06805 e40d2c14f439be67ebdb04529d71fa9b 396 Pfam PF01098 Cell cycle protein 26 381 9.8E-116 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL543_06805 e40d2c14f439be67ebdb04529d71fa9b 396 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 22 389 41.188 T 11-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL543_06805 e40d2c14f439be67ebdb04529d71fa9b 396 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 24 380 5.6E-130 T 11-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL543_17230 2b5510f4e287ad5feaf7abaa63db6d85 351 Gene3D G3DSA:3.30.428.10 46 177 1.6E-55 T 11-10-2018 IPR036265 HIT-like superfamily AL543_17230 2b5510f4e287ad5feaf7abaa63db6d85 351 Gene3D G3DSA:3.30.428.10 178 351 1.1E-70 T 11-10-2018 IPR036265 HIT-like superfamily AL543_17230 2b5510f4e287ad5feaf7abaa63db6d85 351 PIRSF PIRSF000808 2 345 1.1E-123 T 11-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 AL543_17230 2b5510f4e287ad5feaf7abaa63db6d85 351 SUPERFAMILY SSF54197 181 349 2.21E-54 T 11-10-2018 IPR036265 HIT-like superfamily AL543_17230 2b5510f4e287ad5feaf7abaa63db6d85 351 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 5 350 1.7E-184 T 11-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 AL543_17230 2b5510f4e287ad5feaf7abaa63db6d85 351 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 6 178 4.5E-68 T 11-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 AL543_17230 2b5510f4e287ad5feaf7abaa63db6d85 351 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 186 350 9.7E-65 T 11-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 AL543_17230 2b5510f4e287ad5feaf7abaa63db6d85 351 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 153 170 - T 11-10-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 AL543_17230 2b5510f4e287ad5feaf7abaa63db6d85 351 SUPERFAMILY SSF54197 6 179 5.59E-72 T 11-10-2018 IPR036265 HIT-like superfamily AL543_06560 55b98477c47eec6012b8acc0730b9eaf 406 PIRSF PIRSF001491 1 406 7.7E-160 T 11-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 AL543_06560 55b98477c47eec6012b8acc0730b9eaf 406 Gene3D G3DSA:3.40.720.10 3 406 2.0E-148 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AL543_06560 55b98477c47eec6012b8acc0730b9eaf 406 SUPERFAMILY SSF143856 118 234 2.09E-47 T 11-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 AL543_06560 55b98477c47eec6012b8acc0730b9eaf 406 SUPERFAMILY SSF53649 1 406 2.75E-68 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AL543_06560 55b98477c47eec6012b8acc0730b9eaf 406 Pfam PF01676 Metalloenzyme superfamily 2 397 1.0E-42 T 11-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 AL543_06560 55b98477c47eec6012b8acc0730b9eaf 406 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 403 3.3E-178 T 11-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 AL543_06560 55b98477c47eec6012b8acc0730b9eaf 406 Hamap MF_00740 Phosphopentomutase [deoB]. 1 406 54.078 T 11-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 AL543_06560 55b98477c47eec6012b8acc0730b9eaf 406 Gene3D G3DSA:3.30.70.1250 116 237 2.0E-148 T 11-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 AL543_13015 583b2de481c90e9e05cd19d8e60261fe 422 Gene3D G3DSA:3.30.930.10 2 323 3.0E-119 T 11-10-2018 AL543_13015 583b2de481c90e9e05cd19d8e60261fe 422 Pfam PF13393 Histidyl-tRNA synthetase 10 312 5.2E-46 T 11-10-2018 AL543_13015 583b2de481c90e9e05cd19d8e60261fe 422 Pfam PF03129 Anticodon binding domain 336 418 1.9E-11 T 11-10-2018 IPR004154 Anticodon-binding AL543_13015 583b2de481c90e9e05cd19d8e60261fe 422 SUPERFAMILY SSF55681 5 321 4.78E-106 T 11-10-2018 AL543_13015 583b2de481c90e9e05cd19d8e60261fe 422 SUPERFAMILY SSF52954 327 419 2.29E-25 T 11-10-2018 AL543_13015 583b2de481c90e9e05cd19d8e60261fe 422 Gene3D G3DSA:3.40.50.800 326 421 1.9E-25 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily AL543_13015 583b2de481c90e9e05cd19d8e60261fe 422 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 420 33.833 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 AL543_13015 583b2de481c90e9e05cd19d8e60261fe 422 PIRSF PIRSF001549 2 421 6.6E-125 T 11-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 AL543_13015 583b2de481c90e9e05cd19d8e60261fe 422 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 410 7.1E-160 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 AL543_02475 0a455da6e8635483866cb0c36a801311 490 PIRSF PIRSF017184 5 490 2.2E-134 T 11-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 AL543_02475 0a455da6e8635483866cb0c36a801311 490 SUPERFAMILY SSF53613 227 489 2.49E-76 T 11-10-2018 IPR029056 Ribokinase-like AL543_02475 0a455da6e8635483866cb0c36a801311 490 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 15 210 3.6E-48 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AL543_02475 0a455da6e8635483866cb0c36a801311 490 Pfam PF01256 Carbohydrate kinase 249 482 9.0E-60 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AL543_02475 0a455da6e8635483866cb0c36a801311 490 Gene3D G3DSA:3.40.1190.20 221 490 7.8E-85 T 11-10-2018 IPR029056 Ribokinase-like AL543_02475 0a455da6e8635483866cb0c36a801311 490 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 230 488 2.3E-66 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AL543_02475 0a455da6e8635483866cb0c36a801311 490 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 225 490 22.335 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AL543_02475 0a455da6e8635483866cb0c36a801311 490 Gene3D G3DSA:3.40.50.10260 4 215 3.4E-59 T 11-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 AL543_02475 0a455da6e8635483866cb0c36a801311 490 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 9 210 22.907 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AL543_02475 0a455da6e8635483866cb0c36a801311 490 SUPERFAMILY SSF64153 7 246 2.35E-65 T 11-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 AL543_02475 0a455da6e8635483866cb0c36a801311 490 Pfam PF03853 YjeF-related protein N-terminus 30 189 1.9E-46 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AL543_02475 0a455da6e8635483866cb0c36a801311 490 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 429 439 - T 11-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site AL543_09435 ebea308d741a2a07892fe4af4b8a56d7 387 SUPERFAMILY SSF53901 1 258 7.63E-79 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL543_09435 ebea308d741a2a07892fe4af4b8a56d7 387 Pfam PF02803 Thiolase, C-terminal domain 262 386 1.3E-49 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AL543_09435 ebea308d741a2a07892fe4af4b8a56d7 387 ProSitePatterns PS00099 Thiolases active site. 368 381 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 AL543_09435 ebea308d741a2a07892fe4af4b8a56d7 387 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 11-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 AL543_09435 ebea308d741a2a07892fe4af4b8a56d7 387 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 4 387 2.2E-235 T 11-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 AL543_09435 ebea308d741a2a07892fe4af4b8a56d7 387 Pfam PF00108 Thiolase, N-terminal domain 4 254 5.0E-82 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 AL543_09435 ebea308d741a2a07892fe4af4b8a56d7 387 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 1 387 60.025 T 11-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 AL543_09435 ebea308d741a2a07892fe4af4b8a56d7 387 Gene3D G3DSA:3.40.47.10 4 267 2.6E-150 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL543_09435 ebea308d741a2a07892fe4af4b8a56d7 387 SUPERFAMILY SSF53901 263 386 1.22E-43 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL543_09435 ebea308d741a2a07892fe4af4b8a56d7 387 Gene3D G3DSA:3.40.47.10 127 381 2.6E-150 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL543_09435 ebea308d741a2a07892fe4af4b8a56d7 387 ProSitePatterns PS00737 Thiolases signature 2. 333 349 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 AL543_09435 ebea308d741a2a07892fe4af4b8a56d7 387 PIRSF PIRSF000429 1 387 7.7E-132 T 11-10-2018 IPR002155 Thiolase GO:0016747 AL543_09435 ebea308d741a2a07892fe4af4b8a56d7 387 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 385 9.2E-143 T 11-10-2018 IPR002155 Thiolase GO:0016747 AL543_17120 46db710afbbf383090425c608ad7d4fb 135 TIGRFAM TIGR00333 nrdI: nrdI protein 5 131 2.8E-40 T 11-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI AL543_17120 46db710afbbf383090425c608ad7d4fb 135 Hamap MF_00128 Protein NrdI [nrdI]. 3 133 30.289 T 11-10-2018 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial AL543_17120 46db710afbbf383090425c608ad7d4fb 135 PIRSF PIRSF005087 1 134 3.6E-45 T 11-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI AL543_17120 46db710afbbf383090425c608ad7d4fb 135 Gene3D G3DSA:3.40.50.360 3 134 5.7E-41 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL543_17120 46db710afbbf383090425c608ad7d4fb 135 SUPERFAMILY SSF52218 1 132 4.75E-20 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL543_17120 46db710afbbf383090425c608ad7d4fb 135 Pfam PF07972 NrdI Flavodoxin like 5 122 1.0E-39 T 11-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI AL543_15160 a0967164df6dadbec5da4d62e75c6381 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 37.647 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL543_15160 a0967164df6dadbec5da4d62e75c6381 268 Pfam PF00290 Tryptophan synthase alpha chain 8 266 1.7E-96 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL543_15160 a0967164df6dadbec5da4d62e75c6381 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 11-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL543_15160 a0967164df6dadbec5da4d62e75c6381 268 Gene3D G3DSA:3.20.20.70 1 268 1.1E-96 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_15160 a0967164df6dadbec5da4d62e75c6381 268 SUPERFAMILY SSF51366 1 266 1.04E-91 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AL543_15160 a0967164df6dadbec5da4d62e75c6381 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 1.5E-102 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL543_04035 cacf48a8e3c93b43d1cc52738da5747c 276 Gene3D G3DSA:3.40.250.10 1 144 4.5E-43 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AL543_04035 cacf48a8e3c93b43d1cc52738da5747c 276 SUPERFAMILY SSF52821 2 136 6.94E-36 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AL543_04035 cacf48a8e3c93b43d1cc52738da5747c 276 Pfam PF00581 Rhodanese-like domain 156 268 6.9E-8 T 11-10-2018 IPR001763 Rhodanese-like domain AL543_04035 cacf48a8e3c93b43d1cc52738da5747c 276 Pfam PF00581 Rhodanese-like domain 7 125 1.2E-14 T 11-10-2018 IPR001763 Rhodanese-like domain AL543_04035 cacf48a8e3c93b43d1cc52738da5747c 276 SMART SM00450 153 273 3.5E-12 T 11-10-2018 IPR001763 Rhodanese-like domain AL543_04035 cacf48a8e3c93b43d1cc52738da5747c 276 SMART SM00450 6 129 5.6E-20 T 11-10-2018 IPR001763 Rhodanese-like domain AL543_04035 cacf48a8e3c93b43d1cc52738da5747c 276 SUPERFAMILY SSF52821 157 276 3.8E-30 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AL543_04035 cacf48a8e3c93b43d1cc52738da5747c 276 Gene3D G3DSA:3.40.250.10 156 276 1.3E-35 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AL543_02225 5e504f3d1902598d579ed5541de4db3c 355 Gene3D G3DSA:3.20.20.190 25 354 7.2E-121 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 AL543_02225 5e504f3d1902598d579ed5541de4db3c 355 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 32 348 1.1E-64 T 11-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 AL543_02225 5e504f3d1902598d579ed5541de4db3c 355 SUPERFAMILY SSF51695 27 353 6.02E-90 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 AL543_17905 975f7186c7ac616a3b11d9d296afef7f 336 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 334 64.597 T 11-10-2018 IPR023588 Transcription regulator HTH, PurR GO:0006355 AL543_17905 975f7186c7ac616a3b11d9d296afef7f 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.0E-6 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL543_17905 975f7186c7ac616a3b11d9d296afef7f 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.0E-6 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL543_17905 975f7186c7ac616a3b11d9d296afef7f 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 9.7E-20 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL543_17905 975f7186c7ac616a3b11d9d296afef7f 336 Gene3D G3DSA:1.10.260.40 3 59 2.5E-24 T 11-10-2018 AL543_17905 975f7186c7ac616a3b11d9d296afef7f 336 SUPERFAMILY SSF47413 1 59 2.01E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL543_17905 975f7186c7ac616a3b11d9d296afef7f 336 Gene3D G3DSA:3.40.50.2300 161 323 3.4E-93 T 11-10-2018 AL543_17905 975f7186c7ac616a3b11d9d296afef7f 336 SMART SM00354 1 71 4.9E-37 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL543_17905 975f7186c7ac616a3b11d9d296afef7f 336 Gene3D G3DSA:3.40.50.2300 69 322 3.4E-93 T 11-10-2018 AL543_17905 975f7186c7ac616a3b11d9d296afef7f 336 SUPERFAMILY SSF53822 60 332 8.25E-95 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AL543_17905 975f7186c7ac616a3b11d9d296afef7f 336 Pfam PF13377 Periplasmic binding protein-like domain 170 330 1.7E-44 T 11-10-2018 AL543_17905 975f7186c7ac616a3b11d9d296afef7f 336 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 11-10-2018 AL543_11240 c35dd5c89040cc8a71d1b837d4004b7b 489 Gene3D G3DSA:2.40.50.140 31 127 7.0E-32 T 11-10-2018 AL543_11240 c35dd5c89040cc8a71d1b837d4004b7b 489 Pfam PF10150 Ribonuclease E/G family 124 393 1.1E-103 T 11-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 AL543_11240 c35dd5c89040cc8a71d1b837d4004b7b 489 SMART SM00316 37 122 5.6E-10 T 11-10-2018 IPR022967 RNA-binding domain, S1 AL543_11240 c35dd5c89040cc8a71d1b837d4004b7b 489 Gene3D G3DSA:3.40.1260.20 402 489 2.5E-8 T 11-10-2018 AL543_11240 c35dd5c89040cc8a71d1b837d4004b7b 489 Pfam PF00575 S1 RNA binding domain 38 109 5.7E-6 T 11-10-2018 IPR003029 S1 domain GO:0003676 AL543_11240 c35dd5c89040cc8a71d1b837d4004b7b 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 8.0E-173 T 11-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 AL543_11240 c35dd5c89040cc8a71d1b837d4004b7b 489 SUPERFAMILY SSF50249 39 128 1.44E-19 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL543_04165 3cf21e16ce471cfe88d423b938bed5fa 186 ProSitePatterns PS00893 Nudix box signature. 65 86 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AL543_04165 3cf21e16ce471cfe88d423b938bed5fa 186 SUPERFAMILY SSF55811 34 156 3.11E-20 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AL543_04165 3cf21e16ce471cfe88d423b938bed5fa 186 Gene3D G3DSA:3.90.79.10 25 165 1.5E-23 T 11-10-2018 AL543_04165 3cf21e16ce471cfe88d423b938bed5fa 186 Pfam PF00293 NUDIX domain 36 155 7.3E-14 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL543_02685 1beae9f07295cdfb4ba788258af967d4 93 Pfam PF10963 Phage tail assembly chaperone 11 93 1.0E-19 T 11-10-2018 IPR024406 Phage tail assembly chaperone TAC-10 AL543_02685 1beae9f07295cdfb4ba788258af967d4 93 ProDom PD068655 ORF26 3'REGION LYS GENE PRECURSOR ORF30 SIGNAL PHAGE 17 93 5.0E-38 T 11-10-2018 IPR024406 Phage tail assembly chaperone TAC-10 AL543_19965 2f8b04505ca7f96271b0358faf9c3368 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 67 83 5.5E-13 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AL543_19965 2f8b04505ca7f96271b0358faf9c3368 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 32 48 5.5E-13 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AL543_19965 2f8b04505ca7f96271b0358faf9c3368 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 88 101 5.5E-13 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AL543_19965 2f8b04505ca7f96271b0358faf9c3368 103 Pfam PF02049 Flagellar hook-basal body complex protein FliE 18 103 3.0E-30 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AL543_19965 2f8b04505ca7f96271b0358faf9c3368 103 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 1 103 16.509 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AL543_19965 2f8b04505ca7f96271b0358faf9c3368 103 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 6 102 7.5E-20 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AL543_08805 e006541521298b1bce5a1956b4607ce5 388 Gene3D G3DSA:1.20.120.140 86 383 3.2E-117 T 11-10-2018 AL543_08805 e006541521298b1bce5a1956b4607ce5 388 SUPERFAMILY SSF47364 84 163 1.44E-21 T 11-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 AL543_08805 e006541521298b1bce5a1956b4607ce5 388 SMART SM00963 89 169 6.0E-26 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL543_08805 e006541521298b1bce5a1956b4607ce5 388 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 358 371 - T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL543_08805 e006541521298b1bce5a1956b4607ce5 388 SMART SM00962 184 385 7.7E-124 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL543_08805 e006541521298b1bce5a1956b4607ce5 388 Gene3D G3DSA:3.40.50.300 184 373 3.2E-117 T 11-10-2018 AL543_08805 e006541521298b1bce5a1956b4607ce5 388 Pfam PF02881 SRP54-type protein, helical bundle domain 104 165 4.4E-13 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL543_08805 e006541521298b1bce5a1956b4607ce5 388 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 112 384 9.8E-116 T 11-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 AL543_08805 e006541521298b1bce5a1956b4607ce5 388 Pfam PF00448 SRP54-type protein, GTPase domain 185 384 3.5E-78 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL543_08805 e006541521298b1bce5a1956b4607ce5 388 SMART SM00382 183 363 1.2E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_08805 e006541521298b1bce5a1956b4607ce5 388 SUPERFAMILY SSF52540 181 385 7.23E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_08805 e006541521298b1bce5a1956b4607ce5 388 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 112 385 64.507 T 11-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 AL543_05670 b076a7a96858db1b1e678c572c40b151 126 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 46 75 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AL543_05670 b076a7a96858db1b1e678c572c40b151 126 Gene3D G3DSA:2.40.50.100 1 126 2.4E-49 T 11-10-2018 AL543_05670 b076a7a96858db1b1e678c572c40b151 126 SUPERFAMILY SSF51230 3 125 1.31E-44 T 11-10-2018 IPR011053 Single hybrid motif AL543_05670 b076a7a96858db1b1e678c572c40b151 126 Pfam PF01597 Glycine cleavage H-protein 5 125 8.6E-49 T 11-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate AL543_05670 b076a7a96858db1b1e678c572c40b151 126 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 126 2.8E-50 T 11-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 AL543_05670 b076a7a96858db1b1e678c572c40b151 126 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 2 124 42.357 T 11-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 AL543_11255 197bcd8c6f29c36ff178f6b5d5793974 481 Gene3D G3DSA:3.30.2290.10 5 240 3.5E-15 T 11-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal AL543_11255 197bcd8c6f29c36ff178f6b5d5793974 481 PIRSF PIRSF004919 15 481 2.6E-143 T 11-10-2018 IPR025502 TldD AL543_11255 197bcd8c6f29c36ff178f6b5d5793974 481 Pfam PF01523 Putative modulator of DNA gyrase 35 332 3.7E-66 T 11-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AL543_11255 197bcd8c6f29c36ff178f6b5d5793974 481 SUPERFAMILY SSF111283 19 480 1.57E-129 T 11-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 AL543_18010 1a43d568b9ef5d0ce4a473bb17cb91c1 198 SUPERFAMILY SSF46689 4 66 1.02E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_18010 1a43d568b9ef5d0ce4a473bb17cb91c1 198 SUPERFAMILY SSF48498 80 189 7.56E-7 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AL543_18010 1a43d568b9ef5d0ce4a473bb17cb91c1 198 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 145 195 2.6E-8 T 11-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type AL543_18010 1a43d568b9ef5d0ce4a473bb17cb91c1 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 6.7E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL543_18010 1a43d568b9ef5d0ce4a473bb17cb91c1 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 6.7E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL543_18010 1a43d568b9ef5d0ce4a473bb17cb91c1 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 9.8E-17 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL543_18010 1a43d568b9ef5d0ce4a473bb17cb91c1 198 Gene3D G3DSA:1.10.10.60 1 56 3.9E-21 T 11-10-2018 AL543_18010 1a43d568b9ef5d0ce4a473bb17cb91c1 198 Gene3D G3DSA:1.10.357.10 60 198 9.8E-28 T 11-10-2018 AL543_05370 d9e96bffe32d5a3133681e940f8a3a81 157 Pfam PF00583 Acetyltransferase (GNAT) family 47 139 6.7E-12 T 11-10-2018 IPR000182 GNAT domain AL543_05370 d9e96bffe32d5a3133681e940f8a3a81 157 SUPERFAMILY SSF55729 11 145 7.3E-22 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL543_05370 d9e96bffe32d5a3133681e940f8a3a81 157 Gene3D G3DSA:3.40.630.30 14 153 6.8E-19 T 11-10-2018 AL543_13270 5d24d648cf2e698c2948b454b6289d2c 296 TIGRFAM TIGR01588 citE: citrate (pro-3S)-lyase, beta subunit 8 290 1.7E-140 T 11-10-2018 IPR006475 Citrate lyase, beta subunit, bacteria GO:0005737|GO:0006084|GO:0008816|GO:0009346 KEGG: 00720+4.1.3.34|MetaCyc: PWY-5392|MetaCyc: PWY-6038 AL543_13270 5d24d648cf2e698c2948b454b6289d2c 296 PIRSF PIRSF015582 2 296 1.7E-75 T 11-10-2018 IPR011206 Citrate lyase beta subunit-like AL543_13270 5d24d648cf2e698c2948b454b6289d2c 296 Gene3D G3DSA:3.20.20.60 3 294 1.4E-89 T 11-10-2018 AL543_13270 5d24d648cf2e698c2948b454b6289d2c 296 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 11 230 4.9E-86 T 11-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 AL543_13270 5d24d648cf2e698c2948b454b6289d2c 296 SUPERFAMILY SSF51621 7 240 1.29E-60 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AL543_03355 a0987e8485c42e86d1a16566b366c99f 505 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 253 2.3E-85 T 11-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AL543_03355 a0987e8485c42e86d1a16566b366c99f 505 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 5 497 2.9E-227 T 11-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 AL543_03355 a0987e8485c42e86d1a16566b366c99f 505 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 363 383 - T 11-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AL543_03355 a0987e8485c42e86d1a16566b366c99f 505 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 451 5.9E-61 T 11-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AL543_03355 a0987e8485c42e86d1a16566b366c99f 505 Hamap MF_00186 Glycerol kinase [glpK]. 4 498 58.557 T 11-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 AL543_03355 a0987e8485c42e86d1a16566b366c99f 505 SUPERFAMILY SSF53067 5 256 4.78E-94 T 11-10-2018 AL543_03355 a0987e8485c42e86d1a16566b366c99f 505 SUPERFAMILY SSF53067 255 497 4.37E-85 T 11-10-2018 AL543_03355 a0987e8485c42e86d1a16566b366c99f 505 Gene3D G3DSA:3.30.420.40 255 500 1.1E-92 T 11-10-2018 AL543_03355 a0987e8485c42e86d1a16566b366c99f 505 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 136 148 - T 11-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AL543_03355 a0987e8485c42e86d1a16566b366c99f 505 Gene3D G3DSA:3.30.420.40 2 254 8.2E-112 T 11-10-2018 AL543_03355 a0987e8485c42e86d1a16566b366c99f 505 PIRSF PIRSF000538 4 503 1.0E-174 T 11-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AL543_19895 1a925c50366b6f4beb8c9d61850cc496 376 Gene3D G3DSA:3.40.1690.10 218 359 9.1E-56 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AL543_19895 1a925c50366b6f4beb8c9d61850cc496 376 SUPERFAMILY SSF160544 250 355 2.88E-38 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AL543_19895 1a925c50366b6f4beb8c9d61850cc496 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 2.0E-39 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL543_19895 1a925c50366b6f4beb8c9d61850cc496 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 2.0E-39 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL543_19895 1a925c50366b6f4beb8c9d61850cc496 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 2.0E-39 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL543_19895 1a925c50366b6f4beb8c9d61850cc496 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 2.0E-39 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL543_19895 1a925c50366b6f4beb8c9d61850cc496 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 2.0E-39 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL543_19895 1a925c50366b6f4beb8c9d61850cc496 376 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 347 1.0E-119 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL543_19895 1a925c50366b6f4beb8c9d61850cc496 376 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 353 4.3E-136 T 11-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 AL543_18445 870eb8d8c58daff98319ff8b8082481d 256 Pfam PF00005 ABC transporter 22 181 3.3E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_18445 870eb8d8c58daff98319ff8b8082481d 256 Gene3D G3DSA:3.40.50.300 3 255 6.2E-78 T 11-10-2018 AL543_18445 870eb8d8c58daff98319ff8b8082481d 256 SMART SM00382 31 229 2.0E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_18445 870eb8d8c58daff98319ff8b8082481d 256 SUPERFAMILY SSF52540 7 251 4.44E-76 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_18445 870eb8d8c58daff98319ff8b8082481d 256 PIRSF PIRSF039085 3 256 1.8E-120 T 11-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AL543_18445 870eb8d8c58daff98319ff8b8082481d 256 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_00925 121431fee8c80c5e014f20c48204de02 292 SUPERFAMILY SSF56281 14 267 2.32E-33 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AL543_00925 121431fee8c80c5e014f20c48204de02 292 Gene3D G3DSA:3.60.15.10 29 261 9.9E-23 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AL543_00925 121431fee8c80c5e014f20c48204de02 292 Pfam PF00753 Metallo-beta-lactamase superfamily 43 227 8.9E-6 T 11-10-2018 IPR001279 Metallo-beta-lactamase AL543_00925 121431fee8c80c5e014f20c48204de02 292 SMART SM00849 45 227 2.6E-18 T 11-10-2018 IPR001279 Metallo-beta-lactamase AL543_14070 6c97b29521fe9f1ce1ff971d8b870ec2 326 Hamap MF_00323 Ferrochelatase [hemH]. 9 324 37.471 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AL543_14070 6c97b29521fe9f1ce1ff971d8b870ec2 326 Gene3D G3DSA:3.40.50.1400 167 305 1.9E-93 T 11-10-2018 AL543_14070 6c97b29521fe9f1ce1ff971d8b870ec2 326 ProSitePatterns PS00534 Ferrochelatase signature. 193 211 - T 11-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AL543_14070 6c97b29521fe9f1ce1ff971d8b870ec2 326 SUPERFAMILY SSF53800 8 323 5.89E-101 T 11-10-2018 AL543_14070 6c97b29521fe9f1ce1ff971d8b870ec2 326 TIGRFAM TIGR00109 hemH: ferrochelatase 8 321 6.1E-105 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AL543_14070 6c97b29521fe9f1ce1ff971d8b870ec2 326 Pfam PF00762 Ferrochelatase 11 321 8.2E-108 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AL543_14070 6c97b29521fe9f1ce1ff971d8b870ec2 326 Gene3D G3DSA:3.40.50.1400 12 321 1.9E-93 T 11-10-2018 AL543_11805 d8fa87d66f2863869f2539dc63eb9aea 283 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 9 273 1.0E-101 T 11-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 AL543_11805 d8fa87d66f2863869f2539dc63eb9aea 283 SUPERFAMILY SSF161098 22 272 5.98E-55 T 11-10-2018 IPR035906 MetI-like superfamily AL543_11805 d8fa87d66f2863869f2539dc63eb9aea 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 280 1.0E-24 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL543_11805 d8fa87d66f2863869f2539dc63eb9aea 283 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 15 278 6.9E-124 T 11-10-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 AL543_11805 d8fa87d66f2863869f2539dc63eb9aea 283 Gene3D G3DSA:1.10.3720.10 19 277 3.6E-67 T 11-10-2018 IPR035906 MetI-like superfamily AL543_09560 cd15a1091acfc6e5cccb088c0b8fe9f5 245 SUPERFAMILY SSF52540 1 238 2.32E-76 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_09560 cd15a1091acfc6e5cccb088c0b8fe9f5 245 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_09560 cd15a1091acfc6e5cccb088c0b8fe9f5 245 Gene3D G3DSA:3.40.50.300 1 243 1.7E-76 T 11-10-2018 AL543_09560 cd15a1091acfc6e5cccb088c0b8fe9f5 245 SMART SM00382 26 216 2.0E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_09560 cd15a1091acfc6e5cccb088c0b8fe9f5 245 Pfam PF00005 ABC transporter 17 168 9.2E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_09560 cd15a1091acfc6e5cccb088c0b8fe9f5 245 PIRSF PIRSF039085 1 244 4.7E-106 T 11-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AL543_16050 818ad41a574bfed84b2f9c36f16cded1 400 SUPERFAMILY SSF54506 4 183 2.28E-70 T 11-10-2018 AL543_16050 818ad41a574bfed84b2f9c36f16cded1 400 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 6 391 3.0E-222 T 11-10-2018 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 AL543_16050 818ad41a574bfed84b2f9c36f16cded1 400 Gene3D G3DSA:3.10.310.10 182 372 7.3E-146 T 11-10-2018 AL543_16050 818ad41a574bfed84b2f9c36f16cded1 400 SUPERFAMILY SSF54506 186 391 6.91E-75 T 11-10-2018 AL543_16050 818ad41a574bfed84b2f9c36f16cded1 400 Gene3D G3DSA:3.10.310.10 12 386 7.3E-146 T 11-10-2018 AL543_16050 818ad41a574bfed84b2f9c36f16cded1 400 Pfam PF04303 PrpF protein 7 389 1.8E-181 T 11-10-2018 IPR007400 PrpF protein AL543_16030 d13d85c66b97823e708d9c5c9adf2ff7 235 SMART SM00895 91 218 1.1E-23 T 11-10-2018 IPR011711 GntR, C-terminal AL543_16030 d13d85c66b97823e708d9c5c9adf2ff7 235 SUPERFAMILY SSF48008 88 224 5.23E-25 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL543_16030 d13d85c66b97823e708d9c5c9adf2ff7 235 Gene3D G3DSA:1.20.120.530 84 226 7.9E-29 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL543_16030 d13d85c66b97823e708d9c5c9adf2ff7 235 SMART SM00345 23 81 7.1E-14 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL543_16030 d13d85c66b97823e708d9c5c9adf2ff7 235 Pfam PF07729 FCD domain 91 217 8.2E-27 T 11-10-2018 IPR011711 GntR, C-terminal AL543_16030 d13d85c66b97823e708d9c5c9adf2ff7 235 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 81 4.1E-15 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL543_16030 d13d85c66b97823e708d9c5c9adf2ff7 235 SUPERFAMILY SSF46785 16 108 1.97E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_16030 d13d85c66b97823e708d9c5c9adf2ff7 235 Gene3D G3DSA:1.10.10.10 15 82 4.0E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_11710 82b2ecb72009aa2f24cf802a13d14316 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.588 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_11710 82b2ecb72009aa2f24cf802a13d14316 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 11-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_11710 82b2ecb72009aa2f24cf802a13d14316 71 Pfam PF01165 Ribosomal protein S21 4 56 4.3E-23 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_11710 82b2ecb72009aa2f24cf802a13d14316 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 44 2.0E-10 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_11710 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.6E-16 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_11710 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.6E-16 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_11710 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.6E-16 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_11710 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.6E-16 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_11710 82b2ecb72009aa2f24cf802a13d14316 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 7.2E-25 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_11710 82b2ecb72009aa2f24cf802a13d14316 71 Gene3D G3DSA:1.20.5.1150 16 54 1.4E-21 T 11-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_14150 22d58fa25af8ecad1c6c952a70104730 441 PRINTS PR00173 Glutamate-aspartate symporter signature 20 40 9.2E-7 T 11-10-2018 AL543_14150 22d58fa25af8ecad1c6c952a70104730 441 PRINTS PR00173 Glutamate-aspartate symporter signature 374 393 9.2E-7 T 11-10-2018 AL543_14150 22d58fa25af8ecad1c6c952a70104730 441 Pfam PF13726 Na+-H+ antiporter family 2 88 1.0E-35 T 11-10-2018 IPR032813 Putative Na+/H+ antiporter, N-terminal AL543_14150 22d58fa25af8ecad1c6c952a70104730 441 Pfam PF03553 Na+/H+ antiporter family 150 435 1.2E-76 T 11-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 AL543_04230 ff354facc155c328602891d1319a0dc8 150 SUPERFAMILY SSF54637 1 139 4.87E-29 T 11-10-2018 IPR029069 HotDog domain superfamily AL543_04230 ff354facc155c328602891d1319a0dc8 150 Gene3D G3DSA:3.10.129.10 1 146 4.0E-54 T 11-10-2018 AL543_04230 ff354facc155c328602891d1319a0dc8 150 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 21 136 1.2E-36 T 11-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 AL543_04230 ff354facc155c328602891d1319a0dc8 150 Pfam PF03061 Thioesterase superfamily 52 128 3.4E-15 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AL543_04190 6f67097848169e6d82526a010ae36738 449 Gene3D G3DSA:3.30.830.10 62 246 7.8E-18 T 11-10-2018 AL543_04190 6f67097848169e6d82526a010ae36738 449 SUPERFAMILY SSF63411 56 249 1.56E-18 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL543_04190 6f67097848169e6d82526a010ae36738 449 Pfam PF05193 Peptidase M16 inactive domain 201 371 8.0E-12 T 11-10-2018 IPR007863 Peptidase M16, C-terminal AL543_17705 fb14c2e370678a02844e921e383496ab 331 Pfam PF00005 ABC transporter 24 187 2.9E-26 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_17705 fb14c2e370678a02844e921e383496ab 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 323 1.7E-20 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL543_17705 fb14c2e370678a02844e921e383496ab 331 Gene3D G3DSA:3.40.50.300 2 330 2.0E-72 T 11-10-2018 AL543_17705 fb14c2e370678a02844e921e383496ab 331 SMART SM00382 32 237 6.7E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_17705 fb14c2e370678a02844e921e383496ab 331 SUPERFAMILY SSF52540 4 268 1.38E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_17705 fb14c2e370678a02844e921e383496ab 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 1.2E-15 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL543_03350 913f7b45b215d53447d4556fd33bb6c8 284 Gene3D G3DSA:1.20.1080.10 3 260 8.6E-96 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AL543_03350 913f7b45b215d53447d4556fd33bb6c8 284 TIGRFAM TIGR00861 MIP: MIP family channel proteins 15 252 3.2E-67 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AL543_03350 913f7b45b215d53447d4556fd33bb6c8 284 PRINTS PR00783 Major intrinsic protein family signature 153 171 8.2E-50 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AL543_03350 913f7b45b215d53447d4556fd33bb6c8 284 PRINTS PR00783 Major intrinsic protein family signature 11 30 8.2E-50 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AL543_03350 913f7b45b215d53447d4556fd33bb6c8 284 PRINTS PR00783 Major intrinsic protein family signature 50 74 8.2E-50 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AL543_03350 913f7b45b215d53447d4556fd33bb6c8 284 PRINTS PR00783 Major intrinsic protein family signature 186 208 8.2E-50 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AL543_03350 913f7b45b215d53447d4556fd33bb6c8 284 PRINTS PR00783 Major intrinsic protein family signature 235 255 8.2E-50 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AL543_03350 913f7b45b215d53447d4556fd33bb6c8 284 PRINTS PR00783 Major intrinsic protein family signature 87 106 8.2E-50 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AL543_03350 913f7b45b215d53447d4556fd33bb6c8 284 Pfam PF00230 Major intrinsic protein 5 252 6.0E-62 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AL543_03350 913f7b45b215d53447d4556fd33bb6c8 284 SUPERFAMILY SSF81338 9 256 2.09E-72 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AL543_03350 913f7b45b215d53447d4556fd33bb6c8 284 ProSitePatterns PS00221 MIP family signature. 68 76 - T 11-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 AL543_09485 7b6f2e465d7808c2a771ecd3991fb9b4 85 Gene3D G3DSA:1.20.20.10 2 77 5.3E-28 T 11-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL543_09485 7b6f2e465d7808c2a771ecd3991fb9b4 85 SUPERFAMILY SSF81333 3 78 3.4E-19 T 11-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily AL543_09485 7b6f2e465d7808c2a771ecd3991fb9b4 85 PRINTS PR00124 ATP synthase C subunit signature 11 30 1.8E-6 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL543_09485 7b6f2e465d7808c2a771ecd3991fb9b4 85 PRINTS PR00124 ATP synthase C subunit signature 49 74 1.8E-6 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL543_09485 7b6f2e465d7808c2a771ecd3991fb9b4 85 PRINTS PR00124 ATP synthase C subunit signature 32 47 1.8E-6 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL543_09485 7b6f2e465d7808c2a771ecd3991fb9b4 85 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 76 3.5E-30 T 11-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AL543_09485 7b6f2e465d7808c2a771ecd3991fb9b4 85 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 11-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL543_09485 7b6f2e465d7808c2a771ecd3991fb9b4 85 Pfam PF00137 ATP synthase subunit C 10 72 3.2E-10 T 11-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 AL543_09485 7b6f2e465d7808c2a771ecd3991fb9b4 85 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 74 13.368 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL543_13020 a6ee280a471b7748fe17ce6fe5962c65 204 PIRSF PIRSF006170 1 204 5.0E-54 T 11-10-2018 IPR026039 Uncharacterised protein family UPF0070 AL543_13020 a6ee280a471b7748fe17ce6fe5962c65 204 Gene3D G3DSA:1.25.40.10 28 203 1.9E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_13020 a6ee280a471b7748fe17ce6fe5962c65 204 SUPERFAMILY SSF48452 90 189 2.0E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_13020 a6ee280a471b7748fe17ce6fe5962c65 204 Pfam PF09976 Tetratricopeptide repeat-like domain 15 204 4.3E-57 T 11-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 AL543_19145 f3c13ddcd9d472d595cb8bf9ddd82a93 575 PIRSF PIRSF004983 3 575 2.9E-191 T 11-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 AL543_19145 f3c13ddcd9d472d595cb8bf9ddd82a93 575 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 12 141 3.3E-27 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AL543_19145 f3c13ddcd9d472d595cb8bf9ddd82a93 575 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 421 553 1.4E-6 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AL543_19145 f3c13ddcd9d472d595cb8bf9ddd82a93 575 Gene3D G3DSA:3.40.50.970 4 198 3.8E-57 T 11-10-2018 AL543_19145 f3c13ddcd9d472d595cb8bf9ddd82a93 575 Gene3D G3DSA:3.40.50.970 369 574 5.2E-50 T 11-10-2018 AL543_19145 f3c13ddcd9d472d595cb8bf9ddd82a93 575 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 6 572 33.332 T 11-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 AL543_19145 f3c13ddcd9d472d595cb8bf9ddd82a93 575 SUPERFAMILY SSF52467 225 369 2.01E-6 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AL543_19145 f3c13ddcd9d472d595cb8bf9ddd82a93 575 SUPERFAMILY SSF52518 9 190 3.91E-28 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AL543_19145 f3c13ddcd9d472d595cb8bf9ddd82a93 575 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 12 448 2.0E-134 T 11-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 AL543_19145 f3c13ddcd9d472d595cb8bf9ddd82a93 575 Gene3D G3DSA:3.40.50.1220 222 344 2.3E-41 T 11-10-2018 AL543_19145 f3c13ddcd9d472d595cb8bf9ddd82a93 575 SUPERFAMILY SSF52518 387 573 4.02E-26 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AL543_19145 f3c13ddcd9d472d595cb8bf9ddd82a93 575 Pfam PF16582 Middle domain of thiamine pyrophosphate 188 407 1.1E-40 T 11-10-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 AL543_11735 659303a5755817d99e4986a9549b5a57 129 Gene3D G3DSA:3.30.1130.10 1 129 1.2E-50 T 11-10-2018 AL543_11735 659303a5755817d99e4986a9549b5a57 129 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 14 126 7.4E-30 T 11-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AL543_11735 659303a5755817d99e4986a9549b5a57 129 Pfam PF02152 Dihydroneopterin aldolase 16 125 1.3E-32 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AL543_11735 659303a5755817d99e4986a9549b5a57 129 SMART SM00905 16 126 1.0E-49 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AL543_11735 659303a5755817d99e4986a9549b5a57 129 TIGRFAM TIGR00526 folB_dom: FolB domain 13 128 2.0E-37 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AL543_11735 659303a5755817d99e4986a9549b5a57 129 SUPERFAMILY SSF55620 12 128 3.84E-38 T 11-10-2018 AL543_07110 bdb386b4873cad582ab69363e06cc17e 241 Hamap MF_00201 DNA repair protein RecO [recO]. 2 231 23.333 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AL543_07110 bdb386b4873cad582ab69363e06cc17e 241 TIGRFAM TIGR00613 reco: DNA repair protein RecO 7 230 1.5E-42 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AL543_07110 bdb386b4873cad582ab69363e06cc17e 241 SUPERFAMILY SSF57863 86 159 1.94E-13 T 11-10-2018 IPR037278 ARFGAP/RecO-like zinc finger AL543_07110 bdb386b4873cad582ab69363e06cc17e 241 Pfam PF11967 Recombination protein O N terminal 5 77 3.3E-24 T 11-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal AL543_07110 bdb386b4873cad582ab69363e06cc17e 241 Gene3D G3DSA:1.20.1440.120 80 239 1.9E-52 T 11-10-2018 AL543_07110 bdb386b4873cad582ab69363e06cc17e 241 SUPERFAMILY SSF50249 6 76 1.35E-15 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL543_07110 bdb386b4873cad582ab69363e06cc17e 241 Pfam PF02565 Recombination protein O C terminal 85 226 5.7E-25 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AL543_07110 bdb386b4873cad582ab69363e06cc17e 241 Gene3D G3DSA:2.40.50.140 2 79 1.3E-33 T 11-10-2018 AL543_15775 3a2476d2c536ba79cfcf4b31be9b358d 440 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 142 172 - T 11-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 AL543_15775 3a2476d2c536ba79cfcf4b31be9b358d 440 Gene3D G3DSA:3.40.50.720 1 170 2.8E-67 T 11-10-2018 AL543_15775 3a2476d2c536ba79cfcf4b31be9b358d 440 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 411 9.1E-49 T 11-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 AL543_15775 3a2476d2c536ba79cfcf4b31be9b358d 440 Gene3D G3DSA:3.90.110.10 171 439 1.8E-97 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AL543_15775 3a2476d2c536ba79cfcf4b31be9b358d 440 SUPERFAMILY SSF56327 173 436 1.25E-90 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AL543_15775 3a2476d2c536ba79cfcf4b31be9b358d 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 1.9E-48 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL543_15775 3a2476d2c536ba79cfcf4b31be9b358d 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 113 133 1.9E-48 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL543_15775 3a2476d2c536ba79cfcf4b31be9b358d 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 142 159 1.9E-48 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL543_15775 3a2476d2c536ba79cfcf4b31be9b358d 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 1.9E-48 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL543_15775 3a2476d2c536ba79cfcf4b31be9b358d 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 78 94 1.9E-48 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL543_15775 3a2476d2c536ba79cfcf4b31be9b358d 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 99 112 1.9E-48 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL543_15775 3a2476d2c536ba79cfcf4b31be9b358d 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 7 22 1.9E-48 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL543_15775 3a2476d2c536ba79cfcf4b31be9b358d 440 Pfam PF02056 Family 4 glycosyl hydrolase 7 186 2.4E-62 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL543_15775 3a2476d2c536ba79cfcf4b31be9b358d 440 SUPERFAMILY SSF51735 6 170 3.28E-55 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_01190 58cf81b65e598e587fe9fc71475443dc 217 Gene3D G3DSA:3.30.1330.200 31 195 1.2E-47 T 11-10-2018 IPR038592 CheD-like superfamily AL543_01190 58cf81b65e598e587fe9fc71475443dc 217 Pfam PF03975 CheD chemotactic sensory transduction 87 184 1.7E-29 T 11-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 AL543_01190 58cf81b65e598e587fe9fc71475443dc 217 SUPERFAMILY SSF64438 33 188 2.56E-46 T 11-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic AL543_01190 58cf81b65e598e587fe9fc71475443dc 217 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 29 188 27.85 T 11-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 AL543_03460 002b2bf141adbe4bc875863f6ede6d30 687 Pfam PF12462 DNA helicase IV / RNA helicase N terminal 1 166 2.0E-47 T 11-10-2018 IPR022161 DNA helicase IV, N-terminal domain AL543_03460 002b2bf141adbe4bc875863f6ede6d30 687 Gene3D G3DSA:3.40.50.300 505 680 6.0E-29 T 11-10-2018 AL543_03460 002b2bf141adbe4bc875863f6ede6d30 687 Gene3D G3DSA:1.10.10.160 301 416 3.4E-53 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily AL543_03460 002b2bf141adbe4bc875863f6ede6d30 687 SUPERFAMILY SSF52540 198 679 3.2E-88 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_03460 002b2bf141adbe4bc875863f6ede6d30 687 Gene3D G3DSA:3.40.50.300 200 497 3.4E-53 T 11-10-2018 AL543_03460 002b2bf141adbe4bc875863f6ede6d30 687 Pfam PF00580 UvrD/REP helicase N-terminal domain 200 493 1.9E-44 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AL543_03460 002b2bf141adbe4bc875863f6ede6d30 687 Pfam PF13361 UvrD-like helicase C-terminal domain 594 666 2.6E-17 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AL543_20360 76cce86e59aaa724bf3c9f7e70e75d7f 255 Gene3D G3DSA:2.30.30.760 195 255 3.6E-11 T 11-10-2018 AL543_20360 76cce86e59aaa724bf3c9f7e70e75d7f 255 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 121 253 2.0E-37 T 11-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal AL543_20360 76cce86e59aaa724bf3c9f7e70e75d7f 255 Pfam PF13144 Chaperone for flagella basal body P-ring formation 56 253 5.4E-50 T 11-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal AL543_20360 76cce86e59aaa724bf3c9f7e70e75d7f 255 SMART SM00858 133 195 4.0E-8 T 11-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AL543_13905 f503e98ba842f28328e7a167d852a0a5 342 Pfam PF06144 DNA polymerase III, delta subunit 20 189 3.9E-49 T 11-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 AL543_13905 f503e98ba842f28328e7a167d852a0a5 342 Gene3D G3DSA:3.40.50.300 1 139 3.3E-49 T 11-10-2018 AL543_13905 f503e98ba842f28328e7a167d852a0a5 342 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 332 7.7E-107 T 11-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 AL543_13905 f503e98ba842f28328e7a167d852a0a5 342 Gene3D G3DSA:1.10.8.60 143 212 4.5E-20 T 11-10-2018 AL543_13905 f503e98ba842f28328e7a167d852a0a5 342 SUPERFAMILY SSF52540 1 208 1.15E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_13905 f503e98ba842f28328e7a167d852a0a5 342 SUPERFAMILY SSF48019 211 333 2.72E-29 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AL543_13905 f503e98ba842f28328e7a167d852a0a5 342 Gene3D G3DSA:1.20.272.10 213 339 1.3E-37 T 11-10-2018 AL543_13905 f503e98ba842f28328e7a167d852a0a5 342 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 213 333 1.2E-34 T 11-10-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL543_15145 d1e1cda51dd63d4390b425c8b2c6b80c 591 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 584 33.376 T 11-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 AL543_15145 d1e1cda51dd63d4390b425c8b2c6b80c 591 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 558 7.0E-106 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL543_15145 d1e1cda51dd63d4390b425c8b2c6b80c 591 SUPERFAMILY SSF55681 108 582 2.49E-102 T 11-10-2018 AL543_15145 d1e1cda51dd63d4390b425c8b2c6b80c 591 SUPERFAMILY SSF50249 1 105 1.5E-33 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL543_15145 d1e1cda51dd63d4390b425c8b2c6b80c 591 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 3.4E-15 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AL543_15145 d1e1cda51dd63d4390b425c8b2c6b80c 591 Pfam PF02938 GAD domain 307 406 1.7E-31 T 11-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 AL543_15145 d1e1cda51dd63d4390b425c8b2c6b80c 591 Gene3D G3DSA:3.30.1360.30 271 420 4.4E-197 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 AL543_15145 d1e1cda51dd63d4390b425c8b2c6b80c 591 SUPERFAMILY SSF55261 288 419 5.89E-47 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 AL543_15145 d1e1cda51dd63d4390b425c8b2c6b80c 591 Gene3D G3DSA:3.30.930.10 118 578 4.4E-197 T 11-10-2018 AL543_15145 d1e1cda51dd63d4390b425c8b2c6b80c 591 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 582 1.2E-264 T 11-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 AL543_15145 d1e1cda51dd63d4390b425c8b2c6b80c 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 2.7E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL543_15145 d1e1cda51dd63d4390b425c8b2c6b80c 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 2.7E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL543_15145 d1e1cda51dd63d4390b425c8b2c6b80c 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 2.7E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL543_15145 d1e1cda51dd63d4390b425c8b2c6b80c 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 2.7E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL543_15145 d1e1cda51dd63d4390b425c8b2c6b80c 591 Gene3D G3DSA:2.40.50.140 1 106 2.4E-34 T 11-10-2018 AL543_12660 b59010d4445b5312643e3670c228fa05 241 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 1 240 37.845 T 11-10-2018 IPR017689 Outer membrane protein assembly factor BamD AL543_12660 b59010d4445b5312643e3670c228fa05 241 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 9 239 4.9E-80 T 11-10-2018 IPR017689 Outer membrane protein assembly factor BamD AL543_12660 b59010d4445b5312643e3670c228fa05 241 Gene3D G3DSA:1.25.40.10 28 241 2.8E-55 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_12660 b59010d4445b5312643e3670c228fa05 241 Pfam PF13525 Outer membrane lipoprotein 26 234 2.5E-81 T 11-10-2018 IPR039565 Outer membrane lipoprotein BamD-like AL543_12660 b59010d4445b5312643e3670c228fa05 241 SUPERFAMILY SSF48452 25 119 8.86E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_06145 75bfbb7e11486fa7f51ccd109338ffd1 280 PRINTS PR00599 Methionine aminopeptidase-1 signature 209 221 2.9E-15 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AL543_06145 75bfbb7e11486fa7f51ccd109338ffd1 280 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 2.9E-15 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AL543_06145 75bfbb7e11486fa7f51ccd109338ffd1 280 PRINTS PR00599 Methionine aminopeptidase-1 signature 179 191 2.9E-15 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AL543_06145 75bfbb7e11486fa7f51ccd109338ffd1 280 Pfam PF00557 Metallopeptidase family M24 12 259 4.6E-53 T 11-10-2018 IPR000994 Peptidase M24 AL543_06145 75bfbb7e11486fa7f51ccd109338ffd1 280 Hamap MF_01974 Methionine aminopeptidase [map]. 3 268 41.972 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AL543_06145 75bfbb7e11486fa7f51ccd109338ffd1 280 Gene3D G3DSA:3.90.230.10 1 278 2.1E-106 T 11-10-2018 AL543_06145 75bfbb7e11486fa7f51ccd109338ffd1 280 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 267 3.4E-91 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AL543_06145 75bfbb7e11486fa7f51ccd109338ffd1 280 SUPERFAMILY SSF55920 3 269 3.01E-89 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like AL543_06145 75bfbb7e11486fa7f51ccd109338ffd1 280 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 185 203 - T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AL543_01215 70fa72a2ec5d8ada4fb67c74521bd000 718 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 429 569 1.9E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_01215 70fa72a2ec5d8ada4fb67c74521bd000 718 SUPERFAMILY SSF47384 319 382 2.47E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL543_01215 70fa72a2ec5d8ada4fb67c74521bd000 718 Pfam PF01627 Hpt domain 7 103 4.7E-18 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AL543_01215 70fa72a2ec5d8ada4fb67c74521bd000 718 Gene3D G3DSA:1.20.120.160 1 144 2.1E-37 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AL543_01215 70fa72a2ec5d8ada4fb67c74521bd000 718 Gene3D G3DSA:2.30.30.40 570 697 8.7E-37 T 11-10-2018 AL543_01215 70fa72a2ec5d8ada4fb67c74521bd000 718 SMART SM00073 5 102 7.3E-25 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AL543_01215 70fa72a2ec5d8ada4fb67c74521bd000 718 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 319 381 1.3E-16 T 11-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AL543_01215 70fa72a2ec5d8ada4fb67c74521bd000 718 Gene3D G3DSA:3.30.565.10 382 569 2.1E-59 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_01215 70fa72a2ec5d8ada4fb67c74521bd000 718 SMART SM00387 426 570 3.6E-25 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_01215 70fa72a2ec5d8ada4fb67c74521bd000 718 Pfam PF01584 CheW-like domain 577 703 1.0E-23 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AL543_01215 70fa72a2ec5d8ada4fb67c74521bd000 718 SUPERFAMILY SSF47226 4 128 4.45E-29 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AL543_01215 70fa72a2ec5d8ada4fb67c74521bd000 718 SUPERFAMILY SSF55874 385 568 1.31E-40 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_01215 70fa72a2ec5d8ada4fb67c74521bd000 718 PRINTS PR00344 Bacterial sensor protein C-terminal signature 471 485 5.4E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_01215 70fa72a2ec5d8ada4fb67c74521bd000 718 PRINTS PR00344 Bacterial sensor protein C-terminal signature 554 567 5.4E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_01215 70fa72a2ec5d8ada4fb67c74521bd000 718 PRINTS PR00344 Bacterial sensor protein C-terminal signature 530 548 5.4E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_01215 70fa72a2ec5d8ada4fb67c74521bd000 718 PRINTS PR00344 Bacterial sensor protein C-terminal signature 514 524 5.4E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_01215 70fa72a2ec5d8ada4fb67c74521bd000 718 SUPERFAMILY SSF50341 569 701 2.35E-29 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AL543_01215 70fa72a2ec5d8ada4fb67c74521bd000 718 Gene3D G3DSA:2.40.50.180 593 656 8.7E-37 T 11-10-2018 AL543_01215 70fa72a2ec5d8ada4fb67c74521bd000 718 SMART SM00260 562 701 2.8E-40 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AL543_01215 70fa72a2ec5d8ada4fb67c74521bd000 718 SMART SM01231 318 381 1.9E-19 T 11-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AL543_01215 70fa72a2ec5d8ada4fb67c74521bd000 718 Gene3D G3DSA:1.10.287.560 318 381 1.9E-17 T 11-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 AL543_09585 4438c75b1691c6d25cd8fcbf92c9cc4c 363 ProSitePatterns PS00618 RecF protein signature 2. 303 321 - T 11-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 AL543_09585 4438c75b1691c6d25cd8fcbf92c9cc4c 363 SUPERFAMILY SSF52540 1 343 7.29E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_09585 4438c75b1691c6d25cd8fcbf92c9cc4c 363 ProSitePatterns PS00617 RecF protein signature 1. 122 142 - T 11-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 AL543_09585 4438c75b1691c6d25cd8fcbf92c9cc4c 363 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 356 5.6E-117 T 11-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 AL543_09585 4438c75b1691c6d25cd8fcbf92c9cc4c 363 Gene3D G3DSA:1.20.1050.90 125 302 1.9E-81 T 11-10-2018 AL543_09585 4438c75b1691c6d25cd8fcbf92c9cc4c 363 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 359 2.4E-35 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal AL543_09585 4438c75b1691c6d25cd8fcbf92c9cc4c 363 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 363 97.001 T 11-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 AL543_09585 4438c75b1691c6d25cd8fcbf92c9cc4c 363 Gene3D G3DSA:3.40.50.300 7 336 1.9E-81 T 11-10-2018 AL543_03640 936b27f526542122452bf4633ac5ab8b 1017 TIGRFAM TIGR03296 M6dom_TIGR03296: M6 family metalloprotease domain 147 434 1.8E-70 T 11-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 AL543_03640 936b27f526542122452bf4633ac5ab8b 1017 Gene3D G3DSA:2.60.40.10 785 875 1.4E-5 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL543_03640 936b27f526542122452bf4633ac5ab8b 1017 PIRSF PIRSF036597 1 996 2.1E-298 T 11-10-2018 IPR012045 Peptidase M6, unassigned InhA-related AL543_03640 936b27f526542122452bf4633ac5ab8b 1017 SUPERFAMILY SSF55486 276 368 2.07E-6 T 11-10-2018 AL543_03640 936b27f526542122452bf4633ac5ab8b 1017 Pfam PF05547 Immune inhibitor A peptidase M6 166 374 1.2E-13 T 11-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 AL543_17265 279f23d4fc9e8ebafaf6f8e4727f1202 328 PIRSF PIRSF002867 4 328 1.1E-101 T 11-10-2018 IPR024181 Chemotaxis response regulator CheV AL543_17265 279f23d4fc9e8ebafaf6f8e4727f1202 328 SMART SM00260 17 163 9.6E-25 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AL543_17265 279f23d4fc9e8ebafaf6f8e4727f1202 328 Gene3D G3DSA:3.40.50.2300 191 327 2.3E-28 T 11-10-2018 AL543_17265 279f23d4fc9e8ebafaf6f8e4727f1202 328 Pfam PF00072 Response regulator receiver domain 198 319 2.8E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_17265 279f23d4fc9e8ebafaf6f8e4727f1202 328 SUPERFAMILY SSF50341 10 168 6.28E-32 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AL543_17265 279f23d4fc9e8ebafaf6f8e4727f1202 328 Gene3D G3DSA:2.30.30.40 39 157 1.6E-29 T 11-10-2018 AL543_17265 279f23d4fc9e8ebafaf6f8e4727f1202 328 SMART SM00448 196 321 6.0E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_17265 279f23d4fc9e8ebafaf6f8e4727f1202 328 Pfam PF01584 CheW-like domain 40 165 2.3E-29 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AL543_17265 279f23d4fc9e8ebafaf6f8e4727f1202 328 SUPERFAMILY SSF52172 196 312 1.07E-27 T 11-10-2018 IPR011006 CheY-like superfamily AL543_17265 279f23d4fc9e8ebafaf6f8e4727f1202 328 Gene3D G3DSA:2.40.50.180 47 163 1.6E-29 T 11-10-2018 AL543_18370 1185a82cfcfdc61b9f10a8f76fcb5c1c 243 Pfam PF00149 Calcineurin-like phosphoesterase 1 199 3.7E-10 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AL543_18370 1185a82cfcfdc61b9f10a8f76fcb5c1c 243 SUPERFAMILY SSF56300 1 220 4.11E-31 T 11-10-2018 AL543_18370 1185a82cfcfdc61b9f10a8f76fcb5c1c 243 Gene3D G3DSA:3.60.21.10 1 229 1.6E-16 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like AL543_18370 1185a82cfcfdc61b9f10a8f76fcb5c1c 243 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 243 118.443 T 11-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 AL543_18370 1185a82cfcfdc61b9f10a8f76fcb5c1c 243 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 230 3.7E-112 T 11-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 AL543_18605 d7b2db31bb5c6a1039a48142d33d4442 196 Pfam PF13036 Peptidoglycan-synthase activator LpoB 41 185 1.9E-55 T 11-10-2018 IPR014094 Penicillin-binding protein activator LpoB AL543_18605 d7b2db31bb5c6a1039a48142d33d4442 196 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 3 187 4.1E-75 T 11-10-2018 IPR014094 Penicillin-binding protein activator LpoB AL543_18605 d7b2db31bb5c6a1039a48142d33d4442 196 Gene3D G3DSA:3.40.50.10610 39 188 4.6E-44 T 11-10-2018 AL543_14835 f4c1ac47c3a723e08bcff61ecad12df6 326 Gene3D G3DSA:1.20.225.30 243 313 5.3E-24 T 11-10-2018 AL543_14835 f4c1ac47c3a723e08bcff61ecad12df6 326 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 11-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AL543_14835 f4c1ac47c3a723e08bcff61ecad12df6 326 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 310 53.05 T 11-10-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 AL543_14835 f4c1ac47c3a723e08bcff61ecad12df6 326 Gene3D G3DSA:3.20.20.70 1 242 3.4E-78 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_14835 f4c1ac47c3a723e08bcff61ecad12df6 326 PIRSF PIRSF006621 1 320 8.0E-74 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AL543_14835 f4c1ac47c3a723e08bcff61ecad12df6 326 Pfam PF01207 Dihydrouridine synthase (Dus) 5 285 1.8E-75 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AL543_14835 f4c1ac47c3a723e08bcff61ecad12df6 326 SUPERFAMILY SSF51395 1 312 1.04E-72 T 11-10-2018 AL543_12080 c396bbf2b906be5b1775ab928f84ed03 293 Pfam PF02569 Pantoate-beta-alanine ligase 2 278 3.4E-100 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AL543_12080 c396bbf2b906be5b1775ab928f84ed03 293 SUPERFAMILY SSF52374 1 281 1.39E-107 T 11-10-2018 AL543_12080 c396bbf2b906be5b1775ab928f84ed03 293 Gene3D G3DSA:3.30.1300.10 181 283 7.1E-27 T 11-10-2018 AL543_12080 c396bbf2b906be5b1775ab928f84ed03 293 Gene3D G3DSA:3.40.50.620 1 179 4.2E-80 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL543_12080 c396bbf2b906be5b1775ab928f84ed03 293 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 39.843 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AL543_12080 c396bbf2b906be5b1775ab928f84ed03 293 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 23 67 5.2E-10 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AL543_12080 c396bbf2b906be5b1775ab928f84ed03 293 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 281 7.5E-107 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AL543_09650 1cc3297b7c06cc05faaab43c33802e7f 326 Gene3D G3DSA:3.40.50.720 126 294 1.9E-124 T 11-10-2018 AL543_09650 1cc3297b7c06cc05faaab43c33802e7f 326 SUPERFAMILY SSF51735 117 291 1.2E-37 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_09650 1cc3297b7c06cc05faaab43c33802e7f 326 Gene3D G3DSA:3.90.180.10 17 325 1.9E-124 T 11-10-2018 AL543_09650 1cc3297b7c06cc05faaab43c33802e7f 326 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 3 326 4.0E-140 T 11-10-2018 IPR014188 Acrylyl-CoA reductase AcuI AL543_09650 1cc3297b7c06cc05faaab43c33802e7f 326 SMART SM00829 13 324 4.4E-5 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AL543_09650 1cc3297b7c06cc05faaab43c33802e7f 326 Pfam PF00107 Zinc-binding dehydrogenase 159 277 5.9E-15 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AL543_09650 1cc3297b7c06cc05faaab43c33802e7f 326 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 87 2.0E-4 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AL543_09650 1cc3297b7c06cc05faaab43c33802e7f 326 SUPERFAMILY SSF50129 2 145 3.93E-44 T 11-10-2018 IPR011032 GroES-like superfamily AL543_01260 5f6576d70317172746eb5ed356c85757 445 SMART SM00388 229 294 3.4E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_01260 5f6576d70317172746eb5ed356c85757 445 Pfam PF00512 His Kinase A (phospho-acceptor) domain 231 293 2.4E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_01260 5f6576d70317172746eb5ed356c85757 445 SMART SM00387 337 445 3.0E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_01260 5f6576d70317172746eb5ed356c85757 445 SUPERFAMILY SSF55874 295 440 3.27E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_01260 5f6576d70317172746eb5ed356c85757 445 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 437 2.8E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_01260 5f6576d70317172746eb5ed356c85757 445 Pfam PF08521 Two-component sensor kinase N-terminal 2 152 1.5E-10 T 11-10-2018 IPR013727 Two-component sensor kinase, N-terminal AL543_01260 5f6576d70317172746eb5ed356c85757 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 402 6.2E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_01260 5f6576d70317172746eb5ed356c85757 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 388 6.2E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_01260 5f6576d70317172746eb5ed356c85757 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 424 6.2E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_01260 5f6576d70317172746eb5ed356c85757 445 Gene3D G3DSA:1.10.287.130 180 291 5.3E-19 T 11-10-2018 AL543_01260 5f6576d70317172746eb5ed356c85757 445 SUPERFAMILY SSF47384 212 294 3.14E-18 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL543_01260 5f6576d70317172746eb5ed356c85757 445 Gene3D G3DSA:3.30.565.10 292 440 1.7E-28 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_15730 2b77cd629209d35d11e3d0b0cf022dcf 427 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 423 4.6E-100 T 11-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AL543_15730 2b77cd629209d35d11e3d0b0cf022dcf 427 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 422 3.0E-106 T 11-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 AL543_15730 2b77cd629209d35d11e3d0b0cf022dcf 427 PIRSF PIRSF006066 1 426 3.7E-73 T 11-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 AL543_20550 547c0ff55b12bccf970a444d6cb1cc39 114 Pfam PF00543 Nitrogen regulatory protein P-II 6 107 1.9E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL543_20550 547c0ff55b12bccf970a444d6cb1cc39 114 PRINTS PR00340 P-II protein signature 25 43 1.9E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL543_20550 547c0ff55b12bccf970a444d6cb1cc39 114 PRINTS PR00340 P-II protein signature 54 77 1.9E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL543_20550 547c0ff55b12bccf970a444d6cb1cc39 114 PRINTS PR00340 P-II protein signature 85 105 1.9E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL543_20550 547c0ff55b12bccf970a444d6cb1cc39 114 PRINTS PR00340 P-II protein signature 4 19 1.9E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL543_20550 547c0ff55b12bccf970a444d6cb1cc39 114 PIRSF PIRSF039144 3 114 2.9E-58 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL543_20550 547c0ff55b12bccf970a444d6cb1cc39 114 SUPERFAMILY SSF54913 3 114 4.45E-47 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AL543_20550 547c0ff55b12bccf970a444d6cb1cc39 114 SMART SM00938 6 107 1.7E-69 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL543_20550 547c0ff55b12bccf970a444d6cb1cc39 114 Gene3D G3DSA:3.30.70.120 1 114 5.8E-49 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AL543_20550 547c0ff55b12bccf970a444d6cb1cc39 114 ProSitePatterns PS00638 P-II protein C-terminal region signature. 85 98 - T 11-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 AL543_20550 547c0ff55b12bccf970a444d6cb1cc39 114 ProSitePatterns PS00496 P-II protein uridylation site. 48 53 - T 11-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 AL543_12270 2203a6b002965512ba7901e7dd48f0bf 481 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 340 354 6.5E-27 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL543_12270 2203a6b002965512ba7901e7dd48f0bf 481 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 355 369 6.5E-27 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL543_12270 2203a6b002965512ba7901e7dd48f0bf 481 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 281 303 6.5E-27 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL543_12270 2203a6b002965512ba7901e7dd48f0bf 481 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 63 82 6.5E-27 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL543_12270 2203a6b002965512ba7901e7dd48f0bf 481 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 419 432 6.5E-27 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL543_12270 2203a6b002965512ba7901e7dd48f0bf 481 Gene3D G3DSA:3.40.710.10 27 91 9.5E-7 T 11-10-2018 AL543_12270 2203a6b002965512ba7901e7dd48f0bf 481 Gene3D G3DSA:3.40.710.10 240 473 1.7E-50 T 11-10-2018 AL543_12270 2203a6b002965512ba7901e7dd48f0bf 481 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 58 441 4.9E-96 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL543_12270 2203a6b002965512ba7901e7dd48f0bf 481 SUPERFAMILY SSF56601 29 444 1.13E-83 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AL543_12270 2203a6b002965512ba7901e7dd48f0bf 481 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 28 442 2.1E-98 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL543_12270 2203a6b002965512ba7901e7dd48f0bf 481 Gene3D G3DSA:3.50.80.20 92 181 3.8E-10 T 11-10-2018 AL543_14580 6f5ccf1dab6892e32424fceb2e48af64 159 SUPERFAMILY SSF53927 8 141 4.78E-31 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AL543_14580 6f5ccf1dab6892e32424fceb2e48af64 159 Gene3D G3DSA:3.40.140.10 9 157 9.6E-39 T 11-10-2018 AL543_14580 6f5ccf1dab6892e32424fceb2e48af64 159 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 11 106 1.7E-16 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain AL543_15610 7203ac3e910a523fbba1e0b7b8dda528 228 Gene3D G3DSA:3.30.70.20 78 228 2.8E-54 T 11-10-2018 AL543_15610 7203ac3e910a523fbba1e0b7b8dda528 228 Gene3D G3DSA:3.30.70.20 30 77 6.3E-6 T 11-10-2018 AL543_15610 7203ac3e910a523fbba1e0b7b8dda528 228 SUPERFAMILY SSF54862 42 224 6.49E-64 T 11-10-2018 AL543_15610 7203ac3e910a523fbba1e0b7b8dda528 228 Pfam PF13247 4Fe-4S dicluster domain 91 188 8.2E-26 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL543_15610 7203ac3e910a523fbba1e0b7b8dda528 228 TIGRFAM TIGR03149 cyt_nit_nrfC: cytochrome c nitrite reductase, Fe-S protein 2 228 1.1E-130 T 11-10-2018 IPR017567 Cytochrome c nitrite reductase, Fe-S protein AL543_15610 7203ac3e910a523fbba1e0b7b8dda528 228 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 132 143 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL543_06200 400c0b05074916bda63bdf7b2e41ac4b 417 SUPERFAMILY SSF53720 3 409 1.09E-112 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AL543_06200 400c0b05074916bda63bdf7b2e41ac4b 417 Gene3D G3DSA:3.40.309.10 224 374 5.6E-153 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AL543_06200 400c0b05074916bda63bdf7b2e41ac4b 417 Gene3D G3DSA:3.40.605.10 16 409 5.6E-153 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AL543_06200 400c0b05074916bda63bdf7b2e41ac4b 417 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 3 416 39.01 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AL543_06200 400c0b05074916bda63bdf7b2e41ac4b 417 PIRSF PIRSF000151 1 417 5.4E-166 T 11-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 AL543_06200 400c0b05074916bda63bdf7b2e41ac4b 417 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 323 344 - T 11-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AL543_06200 400c0b05074916bda63bdf7b2e41ac4b 417 Pfam PF00171 Aldehyde dehydrogenase family 9 279 1.8E-15 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AL543_06200 400c0b05074916bda63bdf7b2e41ac4b 417 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 11 406 2.8E-167 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AL543_16645 1fc8f3be1410559b9dcb13f9bc9457cd 477 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 17 447 5.2E-115 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL543_16645 1fc8f3be1410559b9dcb13f9bc9457cd 477 Gene3D G3DSA:1.20.210.10 6 474 4.1E-205 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL543_16645 1fc8f3be1410559b9dcb13f9bc9457cd 477 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 11 468 2.0E-228 T 11-10-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 AL543_16645 1fc8f3be1410559b9dcb13f9bc9457cd 477 SUPERFAMILY SSF81442 13 467 3.4E-122 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL543_16645 1fc8f3be1410559b9dcb13f9bc9457cd 477 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 207 262 - T 11-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL543_08265 58d9fb0860b502c035186cbfd2ced4c1 295 Pfam PF02219 Methylenetetrahydrofolate reductase 16 290 3.8E-100 T 11-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 AL543_08265 58d9fb0860b502c035186cbfd2ced4c1 295 SUPERFAMILY SSF51730 21 293 6.67E-96 T 11-10-2018 IPR029041 FAD-linked oxidoreductase-like AL543_08265 58d9fb0860b502c035186cbfd2ced4c1 295 Gene3D G3DSA:3.20.20.220 1 295 6.0E-110 T 11-10-2018 AL543_08265 58d9fb0860b502c035186cbfd2ced4c1 295 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 24 289 3.9E-103 T 11-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 AL543_14275 25ffae7d40642e3d341a38ca8359a4b9 138 SUPERFAMILY SSF54631 1 126 1.12E-33 T 11-10-2018 AL543_14275 25ffae7d40642e3d341a38ca8359a4b9 138 Pfam PF00571 CBS domain 6 61 2.8E-8 T 11-10-2018 IPR000644 CBS domain AL543_14275 25ffae7d40642e3d341a38ca8359a4b9 138 Pfam PF00571 CBS domain 73 127 1.3E-13 T 11-10-2018 IPR000644 CBS domain AL543_14275 25ffae7d40642e3d341a38ca8359a4b9 138 SMART SM00116 13 61 0.011 T 11-10-2018 IPR000644 CBS domain AL543_14275 25ffae7d40642e3d341a38ca8359a4b9 138 SMART SM00116 80 127 5.1E-9 T 11-10-2018 IPR000644 CBS domain AL543_14275 25ffae7d40642e3d341a38ca8359a4b9 138 Gene3D G3DSA:3.10.580.10 1 136 1.8E-31 T 11-10-2018 AL543_17115 807e2bdbaf58b7cb15bc63fa4fb4770a 712 TIGRFAM TIGR04170 RNR_1b_NrdE: ribonucleoside-diphosphate reductase, class 1b, alpha subunit 13 712 0.0 T 11-10-2018 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL543_17115 807e2bdbaf58b7cb15bc63fa4fb4770a 712 Pfam PF08343 Ribonucleotide reductase N-terminal 14 95 2.2E-28 T 11-10-2018 IPR013554 Ribonucleotide reductase N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL543_17115 807e2bdbaf58b7cb15bc63fa4fb4770a 712 Gene3D G3DSA:3.20.70.20 158 693 7.4E-198 T 11-10-2018 AL543_17115 807e2bdbaf58b7cb15bc63fa4fb4770a 712 PRINTS PR01183 Ribonucleotide reductase large chain signature 424 447 9.9E-32 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL543_17115 807e2bdbaf58b7cb15bc63fa4fb4770a 712 PRINTS PR01183 Ribonucleotide reductase large chain signature 491 514 9.9E-32 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL543_17115 807e2bdbaf58b7cb15bc63fa4fb4770a 712 PRINTS PR01183 Ribonucleotide reductase large chain signature 463 485 9.9E-32 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL543_17115 807e2bdbaf58b7cb15bc63fa4fb4770a 712 PRINTS PR01183 Ribonucleotide reductase large chain signature 249 268 9.9E-32 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL543_17115 807e2bdbaf58b7cb15bc63fa4fb4770a 712 PRINTS PR01183 Ribonucleotide reductase large chain signature 380 391 9.9E-32 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL543_17115 807e2bdbaf58b7cb15bc63fa4fb4770a 712 PRINTS PR01183 Ribonucleotide reductase large chain signature 575 602 9.9E-32 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL543_17115 807e2bdbaf58b7cb15bc63fa4fb4770a 712 SUPERFAMILY SSF51998 173 696 1.89E-182 T 11-10-2018 AL543_17115 807e2bdbaf58b7cb15bc63fa4fb4770a 712 Pfam PF02867 Ribonucleotide reductase, barrel domain 175 691 3.3E-142 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL543_17115 807e2bdbaf58b7cb15bc63fa4fb4770a 712 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 97 169 1.3E-9 T 11-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL543_17115 807e2bdbaf58b7cb15bc63fa4fb4770a 712 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 564 586 - T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL543_17115 807e2bdbaf58b7cb15bc63fa4fb4770a 712 SUPERFAMILY SSF48168 13 172 2.62E-54 T 11-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL543_17115 807e2bdbaf58b7cb15bc63fa4fb4770a 712 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 101 694 8.6E-163 T 11-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL543_17115 807e2bdbaf58b7cb15bc63fa4fb4770a 712 Gene3D G3DSA:1.10.1650.20 292 344 7.4E-198 T 11-10-2018 AL543_15965 a05c33e98301593dd666ff413b48619e 74 Pfam PF04400 (Na+)-NQR maturation NqrM 27 68 7.5E-21 T 11-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM AL543_20385 4d055d16eaefb668017abe3a5d6df0f0 377 Pfam PF16538 Flagellar assembly protein T, C-terminal domain 299 375 4.6E-27 T 11-10-2018 IPR032388 Flagellar assembly protein T, C-terminal AL543_20385 4d055d16eaefb668017abe3a5d6df0f0 377 Gene3D G3DSA:3.30.1660.40 24 113 5.1E-34 T 11-10-2018 IPR038180 FlgT, N-terminal domain superfamily AL543_20385 4d055d16eaefb668017abe3a5d6df0f0 377 Gene3D G3DSA:2.40.10.410 291 377 2.7E-34 T 11-10-2018 IPR038165 FlgT, C-terminal domain superfamily AL543_20385 4d055d16eaefb668017abe3a5d6df0f0 377 Pfam PF16539 Flagellar assembly protein T, middle domain 114 256 1.3E-42 T 11-10-2018 IPR032386 Flagellar assembly protein T, middle domain AL543_20385 4d055d16eaefb668017abe3a5d6df0f0 377 Pfam PF16548 Flagellar assembly protein T, N-terminal domain 24 110 5.3E-26 T 11-10-2018 IPR032370 Flagellar assembly protein T, N-terminal AL543_20385 4d055d16eaefb668017abe3a5d6df0f0 377 Gene3D G3DSA:3.40.50.10610 114 290 2.1E-53 T 11-10-2018 AL543_16760 deef2ad54cd424925f876737bf5ce358 207 SUPERFAMILY SSF48657 5 118 3.14E-39 T 11-10-2018 IPR036442 ProQ/FinO domain superfamily AL543_16760 deef2ad54cd424925f876737bf5ce358 207 Pfam PF17516 ProQ C-terminal domain 158 206 3.1E-22 T 11-10-2018 IPR035236 RNA chaperone ProQ, C-terminal AL543_16760 deef2ad54cd424925f876737bf5ce358 207 Gene3D G3DSA:1.10.1710.10 1 122 2.3E-25 T 11-10-2018 IPR036442 ProQ/FinO domain superfamily AL543_16760 deef2ad54cd424925f876737bf5ce358 207 SMART SM00945 5 119 8.4E-62 T 11-10-2018 IPR016103 ProQ/FinO domain AL543_16760 deef2ad54cd424925f876737bf5ce358 207 Pfam PF04352 ProQ/FINO family 8 115 1.4E-42 T 11-10-2018 IPR016103 ProQ/FinO domain AL543_16760 deef2ad54cd424925f876737bf5ce358 207 Hamap MF_00749 RNA chaperone ProQ [proQ]. 3 207 29.808 T 11-10-2018 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 AL543_16725 bc94b8c0b6604689c78348bfa203120c 180 PIRSF PIRSF010252 1 178 2.8E-67 T 11-10-2018 IPR009809 Cell division protein ZapC AL543_16725 bc94b8c0b6604689c78348bfa203120c 180 Pfam PF07126 Cell-division protein ZapC 1 168 4.3E-62 T 11-10-2018 IPR009809 Cell division protein ZapC AL543_16725 bc94b8c0b6604689c78348bfa203120c 180 Hamap MF_00906 Cell division protein ZapC [zapC]. 1 177 37.355 T 11-10-2018 IPR009809 Cell division protein ZapC AL543_03155 e416c6d557453cf9a6822f2f5e66e078 234 Gene3D G3DSA:3.30.1360.40 5 85 1.1E-11 T 11-10-2018 AL543_03155 e416c6d557453cf9a6822f2f5e66e078 234 Gene3D G3DSA:2.40.100.10 91 228 4.1E-47 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily AL543_03155 e416c6d557453cf9a6822f2f5e66e078 234 SUPERFAMILY SSF50891 92 221 7.21E-39 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily AL543_03155 e416c6d557453cf9a6822f2f5e66e078 234 SUPERFAMILY SSF160467 7 97 6.28E-13 T 11-10-2018 AL543_03155 e416c6d557453cf9a6822f2f5e66e078 234 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 6 205 1.1E-61 T 11-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D AL543_03155 e416c6d557453cf9a6822f2f5e66e078 234 SMART SM00796 5 205 1.1E-78 T 11-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D AL543_08165 6bebc7e3aef82e3cc6c634cfaf10bce9 544 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 4.9E-252 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL543_08165 6bebc7e3aef82e3cc6c634cfaf10bce9 544 Gene3D G3DSA:3.30.260.10 138 410 8.5E-238 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily AL543_08165 6bebc7e3aef82e3cc6c634cfaf10bce9 544 SUPERFAMILY SSF48592 7 521 7.02E-77 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily AL543_08165 6bebc7e3aef82e3cc6c634cfaf10bce9 544 Gene3D G3DSA:3.50.7.10 173 379 8.5E-238 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily AL543_08165 6bebc7e3aef82e3cc6c634cfaf10bce9 544 Hamap MF_00600 60 kDa chaperonin [groL]. 2 543 41.379 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL543_08165 6bebc7e3aef82e3cc6c634cfaf10bce9 544 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL543_08165 6bebc7e3aef82e3cc6c634cfaf10bce9 544 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL543_08165 6bebc7e3aef82e3cc6c634cfaf10bce9 544 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL543_08165 6bebc7e3aef82e3cc6c634cfaf10bce9 544 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL543_08165 6bebc7e3aef82e3cc6c634cfaf10bce9 544 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL543_08165 6bebc7e3aef82e3cc6c634cfaf10bce9 544 Gene3D G3DSA:1.10.560.10 8 521 8.5E-238 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily AL543_08165 6bebc7e3aef82e3cc6c634cfaf10bce9 544 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 522 2.1E-94 T 11-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 AL543_08165 6bebc7e3aef82e3cc6c634cfaf10bce9 544 SUPERFAMILY SSF54849 139 203 1.14E-23 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily AL543_08165 6bebc7e3aef82e3cc6c634cfaf10bce9 544 SUPERFAMILY SSF52029 185 376 4.71E-83 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily AL543_08165 6bebc7e3aef82e3cc6c634cfaf10bce9 544 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 11-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL543_00360 3c5a7b689df3c89f71b3e7e15d43df38 248 SUPERFAMILY SSF89550 5 243 1.96E-59 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AL543_00360 3c5a7b689df3c89f71b3e7e15d43df38 248 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 2 245 52.299 T 11-10-2018 IPR023710 Probable phosphatase YcdX GO:0008270 AL543_00360 3c5a7b689df3c89f71b3e7e15d43df38 248 SMART SM00481 5 79 2.4E-8 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal AL543_00360 3c5a7b689df3c89f71b3e7e15d43df38 248 Gene3D G3DSA:3.20.20.140 3 247 1.4E-61 T 11-10-2018 AL543_10175 221f689314b0f97ce6e05b9be19f6470 399 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 187 370 1.1E-75 T 11-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AL543_10175 221f689314b0f97ce6e05b9be19f6470 399 SUPERFAMILY SSF102645 184 397 2.75E-81 T 11-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AL543_10175 221f689314b0f97ce6e05b9be19f6470 399 Gene3D G3DSA:3.40.50.1950 1 184 8.7E-56 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 AL543_10175 221f689314b0f97ce6e05b9be19f6470 399 SUPERFAMILY SSF52507 1 180 2.62E-61 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 AL543_10175 221f689314b0f97ce6e05b9be19f6470 399 Pfam PF02441 Flavoprotein 7 178 3.7E-45 T 11-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AL543_10175 221f689314b0f97ce6e05b9be19f6470 399 Gene3D G3DSA:3.40.50.10300 185 399 1.2E-84 T 11-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AL543_10175 221f689314b0f97ce6e05b9be19f6470 399 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 4 395 2.0E-152 T 11-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 AL543_09535 c6695a4608c58a17f3a1bd26dae40e97 453 Gene3D G3DSA:1.20.120.430 121 453 1.1E-104 T 11-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 AL543_09535 c6695a4608c58a17f3a1bd26dae40e97 453 Pfam PF01926 50S ribosome-binding GTPase 217 307 2.3E-24 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AL543_09535 c6695a4608c58a17f3a1bd26dae40e97 453 SUPERFAMILY SSF52540 70 371 6.37E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_09535 c6695a4608c58a17f3a1bd26dae40e97 453 Gene3D G3DSA:3.30.1360.120 1 120 5.5E-40 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 AL543_09535 c6695a4608c58a17f3a1bd26dae40e97 453 Pfam PF12631 MnmE helical domain 122 450 1.6E-62 T 11-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 AL543_09535 c6695a4608c58a17f3a1bd26dae40e97 453 Pfam PF10396 GTP-binding protein TrmE N-terminus 5 119 9.8E-36 T 11-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 AL543_09535 c6695a4608c58a17f3a1bd26dae40e97 453 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 10 453 3.6E-103 T 11-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 AL543_09535 c6695a4608c58a17f3a1bd26dae40e97 453 SUPERFAMILY SSF116878 120 453 2.48E-53 T 11-10-2018 AL543_09535 c6695a4608c58a17f3a1bd26dae40e97 453 Gene3D G3DSA:3.40.50.300 216 381 1.1E-104 T 11-10-2018 AL543_09535 c6695a4608c58a17f3a1bd26dae40e97 453 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 215 370 2.2E-23 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL543_09535 c6695a4608c58a17f3a1bd26dae40e97 453 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 4 453 33.196 T 11-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 AL543_20350 692f37e2441ebaca91070da33257b295 275 Gene3D G3DSA:3.40.50.150 75 274 6.8E-59 T 11-10-2018 AL543_20350 692f37e2441ebaca91070da33257b295 275 Gene3D G3DSA:1.10.155.10 1 74 4.5E-11 T 11-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily AL543_20350 692f37e2441ebaca91070da33257b295 275 Pfam PF01739 CheR methyltransferase, SAM binding domain 76 269 9.8E-68 T 11-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AL543_20350 692f37e2441ebaca91070da33257b295 275 SUPERFAMILY SSF53335 76 269 1.28E-48 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL543_20350 692f37e2441ebaca91070da33257b295 275 PRINTS PR00996 Glutamate methyltransferase family signature 30 43 6.5E-43 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL543_20350 692f37e2441ebaca91070da33257b295 275 PRINTS PR00996 Glutamate methyltransferase family signature 212 226 6.5E-43 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL543_20350 692f37e2441ebaca91070da33257b295 275 PRINTS PR00996 Glutamate methyltransferase family signature 143 159 6.5E-43 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL543_20350 692f37e2441ebaca91070da33257b295 275 PRINTS PR00996 Glutamate methyltransferase family signature 106 126 6.5E-43 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL543_20350 692f37e2441ebaca91070da33257b295 275 PRINTS PR00996 Glutamate methyltransferase family signature 231 254 6.5E-43 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL543_20350 692f37e2441ebaca91070da33257b295 275 PRINTS PR00996 Glutamate methyltransferase family signature 69 81 6.5E-43 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL543_20350 692f37e2441ebaca91070da33257b295 275 SMART SM00138 8 272 4.6E-133 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL543_20350 692f37e2441ebaca91070da33257b295 275 SUPERFAMILY SSF47757 3 75 2.22E-15 T 11-10-2018 AL543_20350 692f37e2441ebaca91070da33257b295 275 Pfam PF03705 CheR methyltransferase, all-alpha domain 9 57 1.2E-10 T 11-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AL543_04605 247f13f3c1ca08789ec25e2aabed3a1d 321 Gene3D G3DSA:3.40.190.170 23 321 5.5E-119 T 11-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily AL543_04605 247f13f3c1ca08789ec25e2aabed3a1d 321 PIRSF PIRSF006470 1 321 1.4E-75 T 11-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 AL543_04605 247f13f3c1ca08789ec25e2aabed3a1d 321 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 28 307 8.7E-97 T 11-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 AL543_04605 247f13f3c1ca08789ec25e2aabed3a1d 321 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 29 283 2.7E-76 T 11-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 AL543_15200 82b1c9c1f9b3df817db5175cd2bd57e8 206 Gene3D G3DSA:3.90.870.10 1 206 4.6E-68 T 11-10-2018 AL543_15200 82b1c9c1f9b3df817db5175cd2bd57e8 206 Pfam PF01300 Telomere recombination 23 198 5.9E-44 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 AL543_15200 82b1c9c1f9b3df817db5175cd2bd57e8 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 200 1.4E-70 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 AL543_15200 82b1c9c1f9b3df817db5175cd2bd57e8 206 SUPERFAMILY SSF55821 1 203 3.97E-63 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AL543_08235 3d95ed949ac6b10d43ed8fb0384969a2 734 SUPERFAMILY SSF52540 181 380 2.52E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_08235 3d95ed949ac6b10d43ed8fb0384969a2 734 SMART SM00487 197 396 7.0E-19 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL543_08235 3d95ed949ac6b10d43ed8fb0384969a2 734 SMART SM00490 493 590 6.0E-11 T 11-10-2018 IPR001650 Helicase, C-terminal AL543_08235 3d95ed949ac6b10d43ed8fb0384969a2 734 TIGRFAM TIGR00595 priA: primosomal protein N' 222 730 3.7E-192 T 11-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 AL543_08235 3d95ed949ac6b10d43ed8fb0384969a2 734 Gene3D G3DSA:3.40.50.300 187 380 1.2E-76 T 11-10-2018 AL543_08235 3d95ed949ac6b10d43ed8fb0384969a2 734 Gene3D G3DSA:1.10.8.630 4 114 4.9E-35 T 11-10-2018 AL543_08235 3d95ed949ac6b10d43ed8fb0384969a2 734 Pfam PF00270 DEAD/DEAH box helicase 205 364 3.4E-14 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL543_08235 3d95ed949ac6b10d43ed8fb0384969a2 734 SUPERFAMILY SSF52540 462 631 1.66E-26 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_08235 3d95ed949ac6b10d43ed8fb0384969a2 734 Pfam PF00271 Helicase conserved C-terminal domain 515 589 1.5E-7 T 11-10-2018 IPR001650 Helicase, C-terminal AL543_08235 3d95ed949ac6b10d43ed8fb0384969a2 734 Hamap MF_00983 Probable primosomal protein N' [priA]. 8 733 24.962 T 11-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 AL543_13105 d90ecbefd0d560e8292e59b603a9842a 427 TIGRFAM TIGR02783 TrbL_P: P-type conjugative transfer protein TrbL 28 320 2.8E-76 T 11-10-2018 IPR014150 Conjugal transfer, TrbL AL543_13105 d90ecbefd0d560e8292e59b603a9842a 427 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 62 267 5.9E-37 T 11-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 AL543_15790 72846a6f07d2e9d28f737e6286557beb 717 Pfam PF13506 Glycosyl transferase family 21 201 378 4.0E-11 T 11-10-2018 IPR025993 Ceramide glucosyltransferase GO:0016757 KEGG: 00600+2.4.1.80|MetaCyc: PWY-5129|MetaCyc: PWY-7836|MetaCyc: PWY-7838|MetaCyc: PWY-7839|MetaCyc: PWY-7841|Reactome: R-HSA-1660662 AL543_15790 72846a6f07d2e9d28f737e6286557beb 717 Hamap MF_01072 Glucans biosynthesis glucosyltransferase H [mdoH]. 1 635 45.282 T 11-10-2018 IPR023725 Glucan biosynthesis glucosyltransferase H GO:0016758 AL543_15790 72846a6f07d2e9d28f737e6286557beb 717 SUPERFAMILY SSF53448 132 420 7.2E-24 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL543_15790 72846a6f07d2e9d28f737e6286557beb 717 Gene3D G3DSA:3.90.550.10 124 359 8.5E-18 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL543_11115 694a3cfad0773cb55fd91eda874b758c 940 Gene3D G3DSA:1.10.8.280 286 402 7.3E-248 T 11-10-2018 AL543_11115 694a3cfad0773cb55fd91eda874b758c 940 SUPERFAMILY SSF52540 621 909 4.09E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_11115 694a3cfad0773cb55fd91eda874b758c 940 ProSitePatterns PS00211 ABC transporters family signature. 829 843 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_11115 694a3cfad0773cb55fd91eda874b758c 940 Pfam PF00005 ABC transporter 622 859 5.1E-10 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_11115 694a3cfad0773cb55fd91eda874b758c 940 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_11115 694a3cfad0773cb55fd91eda874b758c 940 SUPERFAMILY SSF52540 4 568 5.75E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_11115 694a3cfad0773cb55fd91eda874b758c 940 Gene3D G3DSA:3.30.190.20 130 243 7.3E-248 T 11-10-2018 AL543_11115 694a3cfad0773cb55fd91eda874b758c 940 Gene3D G3DSA:3.40.50.300 6 593 7.3E-248 T 11-10-2018 AL543_11115 694a3cfad0773cb55fd91eda874b758c 940 Gene3D G3DSA:3.40.50.300 615 935 3.7E-140 T 11-10-2018 AL543_11115 694a3cfad0773cb55fd91eda874b758c 940 Gene3D G3DSA:1.20.1580.10 691 829 3.7E-140 T 11-10-2018 AL543_11115 694a3cfad0773cb55fd91eda874b758c 940 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 923 0.0 T 11-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 AL543_11115 694a3cfad0773cb55fd91eda874b758c 940 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 939 23.0 T 11-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 AL543_11115 694a3cfad0773cb55fd91eda874b758c 940 Gene3D G3DSA:1.20.1580.10 90 491 7.3E-248 T 11-10-2018 AL543_15890 5589b541cd6342a99746807ce5da0d04 513 Gene3D G3DSA:1.10.10.60 458 512 1.3E-24 T 11-10-2018 AL543_15890 5589b541cd6342a99746807ce5da0d04 513 Gene3D G3DSA:3.30.450.20 82 186 5.0E-22 T 11-10-2018 AL543_15890 5589b541cd6342a99746807ce5da0d04 513 Pfam PF00989 PAS fold 84 130 2.1E-5 T 11-10-2018 IPR013767 PAS fold GO:0006355 AL543_15890 5589b541cd6342a99746807ce5da0d04 513 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 464 512 7.2E-27 T 11-10-2018 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 AL543_15890 5589b541cd6342a99746807ce5da0d04 513 SUPERFAMILY SSF55021 1 68 1.48E-6 T 11-10-2018 AL543_15890 5589b541cd6342a99746807ce5da0d04 513 Pfam PF00158 Sigma-54 interaction domain 206 370 1.8E-57 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL543_15890 5589b541cd6342a99746807ce5da0d04 513 Gene3D G3DSA:3.40.50.300 196 375 3.8E-58 T 11-10-2018 AL543_15890 5589b541cd6342a99746807ce5da0d04 513 Gene3D G3DSA:3.30.70.260 1 80 3.4E-25 T 11-10-2018 AL543_15890 5589b541cd6342a99746807ce5da0d04 513 SUPERFAMILY SSF55785 83 162 2.97E-8 T 11-10-2018 IPR035965 PAS domain superfamily AL543_15890 5589b541cd6342a99746807ce5da0d04 513 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 290 305 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL543_15890 5589b541cd6342a99746807ce5da0d04 513 SUPERFAMILY SSF52540 205 443 5.56E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_15890 5589b541cd6342a99746807ce5da0d04 513 SMART SM00382 225 368 5.4E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_15890 5589b541cd6342a99746807ce5da0d04 513 SUPERFAMILY SSF46689 456 511 2.09E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_15890 5589b541cd6342a99746807ce5da0d04 513 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 229 242 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL543_15890 5589b541cd6342a99746807ce5da0d04 513 Gene3D G3DSA:1.10.8.60 376 453 3.9E-17 T 11-10-2018 AL543_15890 5589b541cd6342a99746807ce5da0d04 513 SMART SM00091 80 146 9.2E-6 T 11-10-2018 IPR000014 PAS domain AL543_15890 5589b541cd6342a99746807ce5da0d04 513 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 417 426 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AL543_03775 afe27107c82652d68115675bd1070a1a 99 Hamap MF_02200 Chaperone NapD [napD]. 18 94 18.649 T 11-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly AL543_03775 afe27107c82652d68115675bd1070a1a 99 Gene3D G3DSA:3.30.70.920 18 87 9.1E-21 T 11-10-2018 AL543_03775 afe27107c82652d68115675bd1070a1a 99 Pfam PF03927 NapD protein 18 92 1.3E-27 T 11-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly AL543_17250 58789b03d1377a7c5b3417b15dd262bc 352 SUPERFAMILY SSF55073 183 336 2.98E-41 T 11-10-2018 IPR029787 Nucleotide cyclase AL543_17250 58789b03d1377a7c5b3417b15dd262bc 352 SMART SM00267 167 335 1.9E-55 T 11-10-2018 IPR000160 GGDEF domain AL543_17250 58789b03d1377a7c5b3417b15dd262bc 352 Pfam PF00990 Diguanylate cyclase, GGDEF domain 178 331 1.7E-37 T 11-10-2018 IPR000160 GGDEF domain AL543_17250 58789b03d1377a7c5b3417b15dd262bc 352 Gene3D G3DSA:3.30.70.270 176 350 1.3E-48 T 11-10-2018 AL543_17250 58789b03d1377a7c5b3417b15dd262bc 352 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 177 334 6.3E-41 T 11-10-2018 IPR000160 GGDEF domain AL543_04295 434ec3e822b8a805d30897fd6452275a 544 Gene3D G3DSA:3.40.50.12780 8 435 4.6E-112 T 11-10-2018 AL543_04295 434ec3e822b8a805d30897fd6452275a 544 Pfam PF00501 AMP-binding enzyme 45 440 5.5E-80 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AL543_04295 434ec3e822b8a805d30897fd6452275a 544 Pfam PF13193 AMP-binding enzyme C-terminal domain 449 524 1.3E-13 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL543_04295 434ec3e822b8a805d30897fd6452275a 544 SUPERFAMILY SSF56801 26 530 3.01E-125 T 11-10-2018 AL543_04295 434ec3e822b8a805d30897fd6452275a 544 Gene3D G3DSA:3.30.300.310 436 533 7.2E-26 T 11-10-2018 AL543_00075 08d79d83a2e0f1728eaa15459966c2ff 347 SUPERFAMILY SSF54060 203 306 1.0E-13 T 11-10-2018 AL543_00965 b08d7339ddee3d31bd10db8fbef6d37b 299 SUPERFAMILY SSF46785 4 79 9.25E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_00965 b08d7339ddee3d31bd10db8fbef6d37b 299 Gene3D G3DSA:3.40.190.290 96 283 1.4E-20 T 11-10-2018 AL543_00965 b08d7339ddee3d31bd10db8fbef6d37b 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 3.2E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_00965 b08d7339ddee3d31bd10db8fbef6d37b 299 SUPERFAMILY SSF53850 92 290 6.88E-27 T 11-10-2018 AL543_00965 b08d7339ddee3d31bd10db8fbef6d37b 299 Pfam PF03466 LysR substrate binding domain 91 288 2.4E-24 T 11-10-2018 IPR005119 LysR, substrate-binding AL543_00965 b08d7339ddee3d31bd10db8fbef6d37b 299 Gene3D G3DSA:1.10.10.10 1 88 1.1E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_17565 9fcf027d9eb1779abd662df9c5561bfd 586 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 529 543 7.1E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_17565 9fcf027d9eb1779abd662df9c5561bfd 586 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 543 559 7.1E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_17565 9fcf027d9eb1779abd662df9c5561bfd 586 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 559 571 7.1E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_17565 9fcf027d9eb1779abd662df9c5561bfd 586 Gene3D G3DSA:3.40.50.2300 1 130 1.5E-25 T 11-10-2018 AL543_17565 9fcf027d9eb1779abd662df9c5561bfd 586 Pfam PF00563 EAL domain 140 370 3.7E-68 T 11-10-2018 IPR001633 EAL domain AL543_17565 9fcf027d9eb1779abd662df9c5561bfd 586 SUPERFAMILY SSF141868 141 383 1.57E-73 T 11-10-2018 IPR035919 EAL domain superfamily AL543_17565 9fcf027d9eb1779abd662df9c5561bfd 586 SMART SM00052 134 375 1.2E-67 T 11-10-2018 IPR001633 EAL domain AL543_17565 9fcf027d9eb1779abd662df9c5561bfd 586 Gene3D G3DSA:1.10.10.10 487 585 5.2E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_17565 9fcf027d9eb1779abd662df9c5561bfd 586 Pfam PF00196 Bacterial regulatory proteins, luxR family 528 582 4.0E-19 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_17565 9fcf027d9eb1779abd662df9c5561bfd 586 ProSitePatterns PS00622 LuxR-type HTH domain signature. 543 570 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_17565 9fcf027d9eb1779abd662df9c5561bfd 586 SUPERFAMILY SSF46894 518 583 5.78E-18 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL543_17565 9fcf027d9eb1779abd662df9c5561bfd 586 SMART SM00421 526 583 5.3E-22 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_17565 9fcf027d9eb1779abd662df9c5561bfd 586 Pfam PF00072 Response regulator receiver domain 3 118 8.4E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_17565 9fcf027d9eb1779abd662df9c5561bfd 586 SMART SM00448 1 118 1.6E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_17565 9fcf027d9eb1779abd662df9c5561bfd 586 Gene3D G3DSA:3.20.20.450 138 388 1.4E-74 T 11-10-2018 IPR035919 EAL domain superfamily AL543_17565 9fcf027d9eb1779abd662df9c5561bfd 586 SUPERFAMILY SSF52172 1 130 1.31E-27 T 11-10-2018 IPR011006 CheY-like superfamily AL543_20490 77af2f608ecbe0ea3ee6183bfc5b89f8 199 Pfam PF07681 DoxX 24 111 1.2E-15 T 11-10-2018 IPR032808 DoxX family AL543_14530 36bc9a82b36d29b71f2873a6c0a048f4 402 SUPERFAMILY SSF103473 10 389 1.44E-32 T 11-10-2018 IPR036259 MFS transporter superfamily AL543_14530 36bc9a82b36d29b71f2873a6c0a048f4 402 Gene3D G3DSA:1.20.1250.20 6 203 1.9E-20 T 11-10-2018 AL543_14530 36bc9a82b36d29b71f2873a6c0a048f4 402 Pfam PF07690 Major Facilitator Superfamily 15 275 1.0E-18 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL543_14530 36bc9a82b36d29b71f2873a6c0a048f4 402 Gene3D G3DSA:1.20.1250.20 215 401 9.3E-10 T 11-10-2018 AL543_11945 750d48d0630fd2625777f2e81240fc2c 82 SUPERFAMILY SSF54565 1 77 8.63E-28 T 11-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_11945 750d48d0630fd2625777f2e81240fc2c 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 5.2E-27 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_11945 750d48d0630fd2625777f2e81240fc2c 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 22.891 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_11945 750d48d0630fd2625777f2e81240fc2c 82 Pfam PF00886 Ribosomal protein S16 8 68 4.8E-23 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_11945 750d48d0630fd2625777f2e81240fc2c 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 11-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_11945 750d48d0630fd2625777f2e81240fc2c 82 Gene3D G3DSA:3.30.1320.10 1 82 1.0E-30 T 11-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_06195 a3b47303d6ee6fe4f148535205490ea2 149 Pfam PF03477 ATP cone domain 50 136 1.7E-16 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 AL543_06195 a3b47303d6ee6fe4f148535205490ea2 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 5.5E-73 T 11-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 AL543_06195 a3b47303d6ee6fe4f148535205490ea2 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 90.783 T 11-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 AL543_13000 c334d63ad9c444c415ab58efbbe02c8a 373 PIRSF PIRSF006004 3 367 8.7E-145 T 11-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 AL543_13000 c334d63ad9c444c415ab58efbbe02c8a 373 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 3 358 1.4E-159 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 AL543_13000 c334d63ad9c444c415ab58efbbe02c8a 373 SUPERFAMILY SSF102114 105 332 3.53E-14 T 11-10-2018 AL543_13000 c334d63ad9c444c415ab58efbbe02c8a 373 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 5 353 71.725 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 AL543_13000 c334d63ad9c444c415ab58efbbe02c8a 373 Gene3D G3DSA:1.10.150.530 1 67 1.4E-25 T 11-10-2018 AL543_13000 c334d63ad9c444c415ab58efbbe02c8a 373 Pfam PF04055 Radical SAM superfamily 109 283 3.0E-15 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL543_13000 c334d63ad9c444c415ab58efbbe02c8a 373 Gene3D G3DSA:3.20.20.70 68 338 1.8E-112 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_00635 edcfb23c0ce259295c6bb3c5e45c5f8a 373 Pfam PF08402 TOBE domain 281 353 1.6E-10 T 11-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 AL543_00635 edcfb23c0ce259295c6bb3c5e45c5f8a 373 SUPERFAMILY SSF52540 4 244 1.69E-85 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_00635 edcfb23c0ce259295c6bb3c5e45c5f8a 373 Pfam PF00005 ABC transporter 20 161 8.8E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_00635 edcfb23c0ce259295c6bb3c5e45c5f8a 373 Gene3D G3DSA:2.40.50.100 239 361 3.4E-53 T 11-10-2018 AL543_00635 edcfb23c0ce259295c6bb3c5e45c5f8a 373 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_00635 edcfb23c0ce259295c6bb3c5e45c5f8a 373 Gene3D G3DSA:3.40.50.300 1 238 3.9E-75 T 11-10-2018 AL543_00635 edcfb23c0ce259295c6bb3c5e45c5f8a 373 SMART SM00382 28 211 2.2E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_00635 edcfb23c0ce259295c6bb3c5e45c5f8a 373 Gene3D G3DSA:2.40.50.140 287 344 3.4E-53 T 11-10-2018 AL543_00635 edcfb23c0ce259295c6bb3c5e45c5f8a 373 SUPERFAMILY SSF50331 236 364 1.34E-32 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AL543_13420 f9e2fdc3185370f1848c153eefdd4d48 635 SUPERFAMILY SSF100934 534 608 1.02E-5 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 AL543_13420 f9e2fdc3185370f1848c153eefdd4d48 635 SUPERFAMILY SSF53067 1 182 2.36E-66 T 11-10-2018 AL543_13420 f9e2fdc3185370f1848c153eefdd4d48 635 SUPERFAMILY SSF53067 186 381 1.56E-66 T 11-10-2018 AL543_13420 f9e2fdc3185370f1848c153eefdd4d48 635 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 336 350 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AL543_13420 f9e2fdc3185370f1848c153eefdd4d48 635 Gene3D G3DSA:3.90.640.10 228 315 7.3E-169 T 11-10-2018 AL543_13420 f9e2fdc3185370f1848c153eefdd4d48 635 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AL543_13420 f9e2fdc3185370f1848c153eefdd4d48 635 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 630 36.37 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 AL543_13420 f9e2fdc3185370f1848c153eefdd4d48 635 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 2.5E-287 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 AL543_13420 f9e2fdc3185370f1848c153eefdd4d48 635 Gene3D G3DSA:1.20.1270.10 523 602 5.3E-26 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 AL543_13420 f9e2fdc3185370f1848c153eefdd4d48 635 Pfam PF00012 Hsp70 protein 4 601 1.1E-263 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL543_13420 f9e2fdc3185370f1848c153eefdd4d48 635 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AL543_13420 f9e2fdc3185370f1848c153eefdd4d48 635 Gene3D G3DSA:3.30.420.40 5 378 7.3E-169 T 11-10-2018 AL543_13420 f9e2fdc3185370f1848c153eefdd4d48 635 Gene3D G3DSA:2.60.34.10 382 522 1.5E-63 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 AL543_13420 f9e2fdc3185370f1848c153eefdd4d48 635 SUPERFAMILY SSF100920 383 539 6.67E-59 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 AL543_13420 f9e2fdc3185370f1848c153eefdd4d48 635 Gene3D G3DSA:3.30.420.40 179 365 7.3E-169 T 11-10-2018 AL543_13420 f9e2fdc3185370f1848c153eefdd4d48 635 PRINTS PR00301 70kDa heat shock protein signature 468 484 7.1E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL543_13420 f9e2fdc3185370f1848c153eefdd4d48 635 PRINTS PR00301 70kDa heat shock protein signature 53 61 7.1E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL543_13420 f9e2fdc3185370f1848c153eefdd4d48 635 PRINTS PR00301 70kDa heat shock protein signature 333 349 7.1E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL543_13420 f9e2fdc3185370f1848c153eefdd4d48 635 PRINTS PR00301 70kDa heat shock protein signature 387 406 7.1E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL543_13420 f9e2fdc3185370f1848c153eefdd4d48 635 PRINTS PR00301 70kDa heat shock protein signature 3 16 7.1E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL543_13420 f9e2fdc3185370f1848c153eefdd4d48 635 PRINTS PR00301 70kDa heat shock protein signature 137 157 7.1E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL543_13420 f9e2fdc3185370f1848c153eefdd4d48 635 PRINTS PR00301 70kDa heat shock protein signature 31 43 7.1E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL543_13420 f9e2fdc3185370f1848c153eefdd4d48 635 PRINTS PR00301 70kDa heat shock protein signature 197 207 7.1E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL543_13420 f9e2fdc3185370f1848c153eefdd4d48 635 PRINTS PR00301 70kDa heat shock protein signature 364 384 7.1E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL543_13955 3f09f9a3eb3d7f2ad321799343d60668 169 Gene3D G3DSA:2.70.70.10 9 169 3.7E-61 T 11-10-2018 IPR011055 Duplicated hybrid motif AL543_13955 3f09f9a3eb3d7f2ad321799343d60668 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 7.7E-50 T 11-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AL543_13955 3f09f9a3eb3d7f2ad321799343d60668 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 1.2E-48 T 11-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AL543_13955 3f09f9a3eb3d7f2ad321799343d60668 169 SUPERFAMILY SSF51261 17 166 7.85E-55 T 11-10-2018 IPR011055 Duplicated hybrid motif AL543_13955 3f09f9a3eb3d7f2ad321799343d60668 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 11-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AL543_14985 2c5108eb9c31a64448fd7cf072b59111 203 Gene3D G3DSA:3.40.50.880 1 203 8.1E-74 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL543_14985 2c5108eb9c31a64448fd7cf072b59111 203 Pfam PF00117 Glutamine amidotransferase class-I 7 201 1.9E-18 T 11-10-2018 IPR017926 Glutamine amidotransferase AL543_14985 2c5108eb9c31a64448fd7cf072b59111 203 PIRSF PIRSF000495 3 203 2.9E-64 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AL543_14985 2c5108eb9c31a64448fd7cf072b59111 203 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 4 203 33.717 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AL543_14985 2c5108eb9c31a64448fd7cf072b59111 203 SUPERFAMILY SSF52317 5 202 9.17E-53 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL543_14985 2c5108eb9c31a64448fd7cf072b59111 203 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 5 202 4.8E-68 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AL543_07245 b896d2993d0b34865c398bc8a4943263 362 Gene3D G3DSA:3.40.50.2000 182 309 1.2E-6 T 11-10-2018 AL543_07245 b896d2993d0b34865c398bc8a4943263 362 SUPERFAMILY SSF53756 11 321 1.48E-14 T 11-10-2018 AL543_07245 b896d2993d0b34865c398bc8a4943263 362 Pfam PF13528 Glycosyl transferase family 1 2 300 6.1E-37 T 11-10-2018 AL543_07245 b896d2993d0b34865c398bc8a4943263 362 TIGRFAM TIGR00661 MJ1255: conserved hypothetical protein 2 311 6.3E-138 T 11-10-2018 IPR005262 Conserved hypothetical protein CHP00661 AL543_04585 eedf26d9bdef3f3c29e1c340fc3897ad 278 Gene3D G3DSA:3.40.50.10490 91 278 1.9E-46 T 11-10-2018 AL543_04585 eedf26d9bdef3f3c29e1c340fc3897ad 278 Pfam PF01380 SIS domain 130 251 2.9E-16 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL543_04585 eedf26d9bdef3f3c29e1c340fc3897ad 278 Pfam PF01418 Helix-turn-helix domain, rpiR family 6 81 3.8E-19 T 11-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AL543_04585 eedf26d9bdef3f3c29e1c340fc3897ad 278 Gene3D G3DSA:1.10.10.10 1 81 6.3E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_04585 eedf26d9bdef3f3c29e1c340fc3897ad 278 SUPERFAMILY SSF46689 5 80 3.4E-20 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_04585 eedf26d9bdef3f3c29e1c340fc3897ad 278 SUPERFAMILY SSF53697 103 265 1.31E-32 T 11-10-2018 AL543_09445 7ec8d5aac6346a6de4dafa5bb5e64a34 400 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 5 371 1.1E-83 T 11-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 AL543_09445 7ec8d5aac6346a6de4dafa5bb5e64a34 400 Gene3D G3DSA:1.20.1720.10 8 378 4.6E-73 T 11-10-2018 AL543_09445 7ec8d5aac6346a6de4dafa5bb5e64a34 400 Pfam PF07690 Major Facilitator Superfamily 14 348 2.2E-36 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL543_09445 7ec8d5aac6346a6de4dafa5bb5e64a34 400 SUPERFAMILY SSF103473 5 383 1.2E-53 T 11-10-2018 IPR036259 MFS transporter superfamily AL543_06815 4e7ca828b9d7c9a60bbf5cf3ef9c5c79 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL543_06815 4e7ca828b9d7c9a60bbf5cf3ef9c5c79 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 5.2E-6 T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL543_06815 4e7ca828b9d7c9a60bbf5cf3ef9c5c79 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 2.4E-155 T 11-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL543_06815 4e7ca828b9d7c9a60bbf5cf3ef9c5c79 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.344 T 11-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL543_06815 4e7ca828b9d7c9a60bbf5cf3ef9c5c79 360 Pfam PF00953 Glycosyl transferase family 4 99 283 1.4E-36 T 11-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 AL543_06815 4e7ca828b9d7c9a60bbf5cf3ef9c5c79 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL543_15425 2b05dd52477430026c2899a0424ee626 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 49.656 T 11-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 AL543_15425 2b05dd52477430026c2899a0424ee626 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 39 327 1.6E-114 T 11-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AL543_15425 2b05dd52477430026c2899a0424ee626 327 Gene3D G3DSA:3.30.930.10 7 327 2.9E-127 T 11-10-2018 AL543_15425 2b05dd52477430026c2899a0424ee626 327 Pfam PF01409 tRNA synthetases class II core domain (F) 92 326 4.0E-107 T 11-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 AL543_15425 2b05dd52477430026c2899a0424ee626 327 SUPERFAMILY SSF55681 92 327 1.07E-82 T 11-10-2018 AL543_15425 2b05dd52477430026c2899a0424ee626 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 5.3E-25 T 11-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AL543_15425 2b05dd52477430026c2899a0424ee626 327 SUPERFAMILY SSF46589 13 99 1.26E-22 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 AL543_18055 f1bab87eeb65222706682fe6d7fe4fc8 387 Gene3D G3DSA:2.130.10.10 129 386 4.4E-58 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AL543_18055 f1bab87eeb65222706682fe6d7fe4fc8 387 Gene3D G3DSA:2.130.10.10 13 128 2.0E-20 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AL543_18055 f1bab87eeb65222706682fe6d7fe4fc8 387 SUPERFAMILY SSF50998 132 385 7.06E-48 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AL543_18055 f1bab87eeb65222706682fe6d7fe4fc8 387 Pfam PF13360 PQQ-like domain 44 117 1.6E-8 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AL543_18055 f1bab87eeb65222706682fe6d7fe4fc8 387 Pfam PF13360 PQQ-like domain 266 386 9.5E-10 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AL543_18055 f1bab87eeb65222706682fe6d7fe4fc8 387 Pfam PF13360 PQQ-like domain 128 255 8.7E-23 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AL543_18055 f1bab87eeb65222706682fe6d7fe4fc8 387 SUPERFAMILY SSF50998 27 118 1.84E-17 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AL543_18055 f1bab87eeb65222706682fe6d7fe4fc8 387 SMART SM00564 140 171 9.0E-5 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AL543_18055 f1bab87eeb65222706682fe6d7fe4fc8 387 SMART SM00564 83 114 0.99 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AL543_18055 f1bab87eeb65222706682fe6d7fe4fc8 387 SMART SM00564 179 211 3.0E-8 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AL543_18055 f1bab87eeb65222706682fe6d7fe4fc8 387 SMART SM00564 220 251 3.2E-5 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AL543_18055 f1bab87eeb65222706682fe6d7fe4fc8 387 SMART SM00564 305 345 0.4 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AL543_18055 f1bab87eeb65222706682fe6d7fe4fc8 387 SMART SM00564 42 74 4.7E-4 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AL543_18055 f1bab87eeb65222706682fe6d7fe4fc8 387 SMART SM00564 262 296 43.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AL543_01060 4284c431a90a5df1b78f06a87f483b71 768 Gene3D G3DSA:1.20.1640.10 194 384 1.9E-18 T 11-10-2018 AL543_01060 4284c431a90a5df1b78f06a87f483b71 768 Pfam PF03176 MMPL family 598 760 1.8E-17 T 11-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 AL543_01060 4284c431a90a5df1b78f06a87f483b71 768 Pfam PF03176 MMPL family 132 378 1.2E-22 T 11-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 AL543_01060 4284c431a90a5df1b78f06a87f483b71 768 Gene3D G3DSA:1.20.1640.10 593 767 1.5E-19 T 11-10-2018 AL543_01060 4284c431a90a5df1b78f06a87f483b71 768 SUPERFAMILY SSF82866 165 369 2.88E-35 T 11-10-2018 AL543_01060 4284c431a90a5df1b78f06a87f483b71 768 SUPERFAMILY SSF82866 547 755 6.8E-32 T 11-10-2018 AL543_06180 87861b66524c3c5a20d4cf7b055413a8 369 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 38.2 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL543_06180 87861b66524c3c5a20d4cf7b055413a8 369 SUPERFAMILY SSF142695 205 367 3.79E-48 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AL543_06180 87861b66524c3c5a20d4cf7b055413a8 369 SUPERFAMILY SSF55821 3 202 5.95E-87 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AL543_06180 87861b66524c3c5a20d4cf7b055413a8 369 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 7 199 1.7E-75 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL543_06180 87861b66524c3c5a20d4cf7b055413a8 369 Gene3D G3DSA:3.40.50.10990 206 368 1.1E-31 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AL543_06180 87861b66524c3c5a20d4cf7b055413a8 369 Gene3D G3DSA:3.90.870.10 1 205 2.8E-89 T 11-10-2018 AL543_06180 87861b66524c3c5a20d4cf7b055413a8 369 PIRSF PIRSF001259 1 369 4.0E-132 T 11-10-2018 AL543_06180 87861b66524c3c5a20d4cf7b055413a8 369 Pfam PF00925 GTP cyclohydrolase II 207 367 5.1E-41 T 11-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AL543_06180 87861b66524c3c5a20d4cf7b055413a8 369 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 3.4E-85 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL543_09240 1836af6fccc57286778f4029b036234b 597 Gene3D G3DSA:3.90.230.10 300 594 3.1E-98 T 11-10-2018 AL543_09240 1836af6fccc57286778f4029b036234b 597 Pfam PF01321 Creatinase/Prolidase N-terminal domain 8 138 6.5E-18 T 11-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 AL543_09240 1836af6fccc57286778f4029b036234b 597 Gene3D G3DSA:3.40.350.10 2 146 6.4E-36 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AL543_09240 1836af6fccc57286778f4029b036234b 597 Pfam PF16188 C-terminal region of peptidase_M24 534 594 1.7E-22 T 11-10-2018 IPR032416 Peptidase M24, C-terminal domain AL543_09240 1836af6fccc57286778f4029b036234b 597 Pfam PF16189 Creatinase/Prolidase N-terminal domain 148 306 2.4E-34 T 11-10-2018 AL543_09240 1836af6fccc57286778f4029b036234b 597 Pfam PF00557 Metallopeptidase family M24 309 525 3.5E-47 T 11-10-2018 IPR000994 Peptidase M24 AL543_09240 1836af6fccc57286778f4029b036234b 597 SUPERFAMILY SSF53092 7 130 1.36E-14 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AL543_09240 1836af6fccc57286778f4029b036234b 597 Gene3D G3DSA:3.40.350.10 147 293 7.5E-25 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AL543_09240 1836af6fccc57286778f4029b036234b 597 SUPERFAMILY SSF55920 303 559 2.22E-58 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like AL543_07525 5d80deacd608c7e94cc996c9e5844753 148 SUPERFAMILY SSF55804 1 146 2.75E-40 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AL543_07525 5d80deacd608c7e94cc996c9e5844753 148 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 11-10-2018 IPR002178 PTS EIIA type-2 domain AL543_07525 5d80deacd608c7e94cc996c9e5844753 148 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 9 145 5.3E-37 T 11-10-2018 IPR002178 PTS EIIA type-2 domain AL543_07525 5d80deacd608c7e94cc996c9e5844753 148 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 2 146 2.2E-52 T 11-10-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 AL543_07525 5d80deacd608c7e94cc996c9e5844753 148 Gene3D G3DSA:3.40.930.10 1 148 4.4E-53 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AL543_08305 edf4101d831d4e8cae59abcd0f2c96b0 205 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 92 195 5.1E-40 T 11-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL543_08305 edf4101d831d4e8cae59abcd0f2c96b0 205 SUPERFAMILY SSF46609 1 86 3.67E-30 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL543_08305 edf4101d831d4e8cae59abcd0f2c96b0 205 Gene3D G3DSA:2.40.500.20 84 200 4.7E-48 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL543_08305 edf4101d831d4e8cae59abcd0f2c96b0 205 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 163 170 - T 11-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL543_08305 edf4101d831d4e8cae59abcd0f2c96b0 205 Gene3D G3DSA:1.10.287.990 20 83 1.4E-24 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL543_08305 edf4101d831d4e8cae59abcd0f2c96b0 205 SUPERFAMILY SSF54719 87 201 5.63E-44 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL543_08305 edf4101d831d4e8cae59abcd0f2c96b0 205 PIRSF PIRSF000349 1 205 1.6E-80 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL543_08305 edf4101d831d4e8cae59abcd0f2c96b0 205 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 85 6.8E-26 T 11-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL543_08305 edf4101d831d4e8cae59abcd0f2c96b0 205 PRINTS PR01703 Manganese superoxide dismutase signature 121 129 1.5E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL543_08305 edf4101d831d4e8cae59abcd0f2c96b0 205 PRINTS PR01703 Manganese superoxide dismutase signature 68 81 1.5E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL543_08305 edf4101d831d4e8cae59abcd0f2c96b0 205 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.5E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL543_08305 edf4101d831d4e8cae59abcd0f2c96b0 205 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.5E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL543_08305 edf4101d831d4e8cae59abcd0f2c96b0 205 PRINTS PR01703 Manganese superoxide dismutase signature 161 173 1.5E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL543_03400 a8b52bfea5c6fb1a1246a8e471fd16fe 857 Gene3D G3DSA:2.20.20.100 208 271 2.9E-34 T 11-10-2018 AL543_03400 a8b52bfea5c6fb1a1246a8e471fd16fe 857 SMART SM00448 730 842 6.6E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_03400 a8b52bfea5c6fb1a1246a8e471fd16fe 857 Gene3D G3DSA:3.40.50.2300 720 856 2.0E-29 T 11-10-2018 AL543_03400 a8b52bfea5c6fb1a1246a8e471fd16fe 857 SMART SM00388 479 544 3.5E-23 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_03400 a8b52bfea5c6fb1a1246a8e471fd16fe 857 PRINTS PR00344 Bacterial sensor protein C-terminal signature 649 659 2.1E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_03400 a8b52bfea5c6fb1a1246a8e471fd16fe 857 PRINTS PR00344 Bacterial sensor protein C-terminal signature 631 645 2.1E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_03400 a8b52bfea5c6fb1a1246a8e471fd16fe 857 PRINTS PR00344 Bacterial sensor protein C-terminal signature 666 684 2.1E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_03400 a8b52bfea5c6fb1a1246a8e471fd16fe 857 PRINTS PR00344 Bacterial sensor protein C-terminal signature 690 703 2.1E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_03400 a8b52bfea5c6fb1a1246a8e471fd16fe 857 Gene3D G3DSA:3.30.565.10 545 710 2.8E-47 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_03400 a8b52bfea5c6fb1a1246a8e471fd16fe 857 Pfam PF09308 LuxQ, periplasmic 41 277 5.4E-91 T 11-10-2018 IPR015387 LuxQ, periplasmic GO:0004673|GO:0016791 AL543_03400 a8b52bfea5c6fb1a1246a8e471fd16fe 857 SMART SM00387 591 706 1.3E-36 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_03400 a8b52bfea5c6fb1a1246a8e471fd16fe 857 SUPERFAMILY SSF52172 728 848 3.98E-29 T 11-10-2018 IPR011006 CheY-like superfamily AL543_03400 a8b52bfea5c6fb1a1246a8e471fd16fe 857 Pfam PF00512 His Kinase A (phospho-acceptor) domain 480 544 7.9E-20 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_03400 a8b52bfea5c6fb1a1246a8e471fd16fe 857 SUPERFAMILY SSF47384 468 545 7.46E-20 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL543_03400 a8b52bfea5c6fb1a1246a8e471fd16fe 857 ProDom PD142495 MEMBRANE SENSOR TRANSFERASE LUXQ 2.7.3.- TRANSMEMBRANE INNER PHOSPHORYLATION SENSORY AUTOINDUCER 9 360 1.0E-176 T 11-10-2018 IPR015387 LuxQ, periplasmic GO:0004673|GO:0016791 AL543_03400 a8b52bfea5c6fb1a1246a8e471fd16fe 857 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 592 704 7.1E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_03400 a8b52bfea5c6fb1a1246a8e471fd16fe 857 Gene3D G3DSA:3.30.450.20 344 465 8.6E-8 T 11-10-2018 AL543_03400 a8b52bfea5c6fb1a1246a8e471fd16fe 857 Gene3D G3DSA:1.10.287.130 466 544 5.6E-23 T 11-10-2018 AL543_03400 a8b52bfea5c6fb1a1246a8e471fd16fe 857 SUPERFAMILY SSF55874 533 707 1.57E-45 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_03400 a8b52bfea5c6fb1a1246a8e471fd16fe 857 Pfam PF00072 Response regulator receiver domain 732 842 5.4E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_03400 a8b52bfea5c6fb1a1246a8e471fd16fe 857 SUPERFAMILY SSF103190 52 269 1.54E-62 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily AL543_03400 a8b52bfea5c6fb1a1246a8e471fd16fe 857 Gene3D G3DSA:3.30.450.220 52 207 2.9E-59 T 11-10-2018 AL543_08845 116f90404c294a98acfb02b7e8618a87 156 PIRSF PIRSF005900 1 156 5.6E-43 T 11-10-2018 IPR002177 DNA-binding protein Dps AL543_08845 116f90404c294a98acfb02b7e8618a87 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 62 78 7.8E-13 T 11-10-2018 IPR002177 DNA-binding protein Dps AL543_08845 116f90404c294a98acfb02b7e8618a87 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 38 54 7.8E-13 T 11-10-2018 IPR002177 DNA-binding protein Dps AL543_08845 116f90404c294a98acfb02b7e8618a87 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 133 151 7.8E-13 T 11-10-2018 IPR002177 DNA-binding protein Dps AL543_08845 116f90404c294a98acfb02b7e8618a87 156 Pfam PF00210 Ferritin-like domain 18 155 6.4E-23 T 11-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AL543_08845 116f90404c294a98acfb02b7e8618a87 156 ProSitePatterns PS00818 Dps protein family signature 1. 38 54 - T 11-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 AL543_08845 116f90404c294a98acfb02b7e8618a87 156 Gene3D G3DSA:1.20.1260.10 1 156 3.9E-57 T 11-10-2018 IPR012347 Ferritin-like AL543_08845 116f90404c294a98acfb02b7e8618a87 156 SUPERFAMILY SSF47240 2 155 1.6E-43 T 11-10-2018 IPR009078 Ferritin-like superfamily AL543_12500 a938bea792a37b7e84c82114aef50305 283 Gene3D G3DSA:3.30.572.10 1 283 5.3E-80 T 11-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL543_12500 a938bea792a37b7e84c82114aef50305 283 Pfam PF00303 Thymidylate synthase 2 283 9.2E-73 T 11-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL543_12500 a938bea792a37b7e84c82114aef50305 283 SUPERFAMILY SSF55831 2 283 1.83E-91 T 11-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL543_12500 a938bea792a37b7e84c82114aef50305 283 Hamap MF_00008 Thymidylate synthase [thyA]. 1 283 32.542 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL543_12500 a938bea792a37b7e84c82114aef50305 283 PRINTS PR00108 Thymidylate synthase family signature 211 228 7.2E-14 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL543_12500 a938bea792a37b7e84c82114aef50305 283 PRINTS PR00108 Thymidylate synthase family signature 44 65 7.2E-14 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL543_12500 a938bea792a37b7e84c82114aef50305 283 PRINTS PR00108 Thymidylate synthase family signature 173 199 7.2E-14 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL543_12500 a938bea792a37b7e84c82114aef50305 283 PRINTS PR00108 Thymidylate synthase family signature 129 148 7.2E-14 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL543_12500 a938bea792a37b7e84c82114aef50305 283 ProSitePatterns PS00091 Thymidylate synthase active site. 140 168 - T 11-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL543_12500 a938bea792a37b7e84c82114aef50305 283 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 283 4.6E-43 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL543_04690 6bfeeadafb94612a5ca3275e758a33c3 379 Gene3D G3DSA:3.60.21.10 1 265 2.1E-77 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like AL543_04690 6bfeeadafb94612a5ca3275e758a33c3 379 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 268 351 4.3E-9 T 11-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain AL543_04690 6bfeeadafb94612a5ca3275e758a33c3 379 SUPERFAMILY SSF56300 1 321 4.98E-56 T 11-10-2018 AL543_04690 6bfeeadafb94612a5ca3275e758a33c3 379 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 245 1.5E-56 T 11-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 AL543_04690 6bfeeadafb94612a5ca3275e758a33c3 379 Pfam PF00149 Calcineurin-like phosphoesterase 1 218 4.3E-16 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AL543_07185 b7b29f5ba11ab4c6e1daeaa04b0bc587 409 Gene3D G3DSA:3.30.9.50 80 270 8.2E-123 T 11-10-2018 AL543_07185 b7b29f5ba11ab4c6e1daeaa04b0bc587 409 SUPERFAMILY SSF51905 5 385 4.0E-62 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_07185 b7b29f5ba11ab4c6e1daeaa04b0bc587 409 Gene3D G3DSA:3.50.50.60 6 339 8.2E-123 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_07185 b7b29f5ba11ab4c6e1daeaa04b0bc587 409 Pfam PF01494 FAD binding domain 5 347 2.8E-29 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 AL543_07185 b7b29f5ba11ab4c6e1daeaa04b0bc587 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 2.4E-20 T 11-10-2018 AL543_07185 b7b29f5ba11ab4c6e1daeaa04b0bc587 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 2.4E-20 T 11-10-2018 AL543_07185 b7b29f5ba11ab4c6e1daeaa04b0bc587 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 2.4E-20 T 11-10-2018 AL543_07185 b7b29f5ba11ab4c6e1daeaa04b0bc587 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 2.4E-20 T 11-10-2018 AL543_07185 b7b29f5ba11ab4c6e1daeaa04b0bc587 409 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 11-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 AL543_07185 b7b29f5ba11ab4c6e1daeaa04b0bc587 409 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 391 3.9E-139 T 11-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 AL543_03925 368739c0c35ee29e9450e5e51d5e619d 1052 Gene3D G3DSA:3.30.70.1440 683 892 2.1E-237 T 11-10-2018 AL543_03925 368739c0c35ee29e9450e5e51d5e619d 1052 Gene3D G3DSA:3.30.2090.10 189 280 2.1E-237 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL543_03925 368739c0c35ee29e9450e5e51d5e619d 1052 Gene3D G3DSA:3.30.70.1430 47 829 2.1E-237 T 11-10-2018 AL543_03925 368739c0c35ee29e9450e5e51d5e619d 1052 SUPERFAMILY SSF82714 732 816 1.19E-10 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL543_03925 368739c0c35ee29e9450e5e51d5e619d 1052 Gene3D G3DSA:3.30.2090.10 731 821 2.1E-237 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL543_03925 368739c0c35ee29e9450e5e51d5e619d 1052 SUPERFAMILY SSF82714 194 275 1.02E-14 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL543_03925 368739c0c35ee29e9450e5e51d5e619d 1052 Pfam PF00873 AcrB/AcrD/AcrF family 16 1044 2.7E-166 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_03925 368739c0c35ee29e9450e5e51d5e619d 1052 SUPERFAMILY SSF82693 47 136 3.4E-19 T 11-10-2018 AL543_03925 368739c0c35ee29e9450e5e51d5e619d 1052 SUPERFAMILY SSF82866 821 1048 9.42E-46 T 11-10-2018 AL543_03925 368739c0c35ee29e9450e5e51d5e619d 1052 SUPERFAMILY SSF82866 303 504 3.27E-37 T 11-10-2018 AL543_03925 368739c0c35ee29e9450e5e51d5e619d 1052 Gene3D G3DSA:1.20.1640.10 21 516 2.1E-237 T 11-10-2018 AL543_03925 368739c0c35ee29e9450e5e51d5e619d 1052 Gene3D G3DSA:3.30.70.1430 572 682 2.1E-237 T 11-10-2018 AL543_03925 368739c0c35ee29e9450e5e51d5e619d 1052 PRINTS PR00702 Acriflavin resistance protein family signature 477 500 5.8E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_03925 368739c0c35ee29e9450e5e51d5e619d 1052 PRINTS PR00702 Acriflavin resistance protein family signature 370 391 5.8E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_03925 368739c0c35ee29e9450e5e51d5e619d 1052 PRINTS PR00702 Acriflavin resistance protein family signature 398 422 5.8E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_03925 368739c0c35ee29e9450e5e51d5e619d 1052 PRINTS PR00702 Acriflavin resistance protein family signature 17 41 5.8E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_03925 368739c0c35ee29e9450e5e51d5e619d 1052 PRINTS PR00702 Acriflavin resistance protein family signature 45 63 5.8E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_03925 368739c0c35ee29e9450e5e51d5e619d 1052 PRINTS PR00702 Acriflavin resistance protein family signature 452 475 5.8E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_03925 368739c0c35ee29e9450e5e51d5e619d 1052 Gene3D G3DSA:1.20.1640.10 517 1042 2.1E-237 T 11-10-2018 AL543_03925 368739c0c35ee29e9450e5e51d5e619d 1052 SUPERFAMILY SSF82693 149 336 3.49E-13 T 11-10-2018 AL543_03925 368739c0c35ee29e9450e5e51d5e619d 1052 Gene3D G3DSA:3.30.70.1320 143 338 2.1E-237 T 11-10-2018 AL543_03925 368739c0c35ee29e9450e5e51d5e619d 1052 SUPERFAMILY SSF82693 568 682 3.09E-13 T 11-10-2018 AL543_03815 ab552850f00b7a26df5c003a2e72086e 157 SUPERFAMILY SSF54534 18 156 9.43E-50 T 11-10-2018 AL543_03815 ab552850f00b7a26df5c003a2e72086e 157 Gene3D G3DSA:3.10.50.40 20 157 2.2E-52 T 11-10-2018 AL543_03815 ab552850f00b7a26df5c003a2e72086e 157 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 24 59 5.0E-9 T 11-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AL543_03815 ab552850f00b7a26df5c003a2e72086e 157 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 66 154 1.3E-27 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AL543_08905 2c1d1a6aea8abbd256bc2057f9792853 417 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 36 282 3.1E-73 T 11-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 AL543_08905 2c1d1a6aea8abbd256bc2057f9792853 417 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 5 412 4.9E-171 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL543_08905 2c1d1a6aea8abbd256bc2057f9792853 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 76 93 3.2E-31 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL543_08905 2c1d1a6aea8abbd256bc2057f9792853 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 380 402 3.2E-31 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL543_08905 2c1d1a6aea8abbd256bc2057f9792853 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 165 174 3.2E-31 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL543_08905 2c1d1a6aea8abbd256bc2057f9792853 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 300 318 3.2E-31 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL543_08905 2c1d1a6aea8abbd256bc2057f9792853 417 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 227 242 - T 11-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site AL543_08905 2c1d1a6aea8abbd256bc2057f9792853 417 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 16 413 41.522 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL543_08905 2c1d1a6aea8abbd256bc2057f9792853 417 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 31 370 2.0E-25 T 11-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 AL543_08905 2c1d1a6aea8abbd256bc2057f9792853 417 SUPERFAMILY SSF51419 27 284 4.06E-82 T 11-10-2018 IPR029066 PLP-binding barrel AL543_08905 2c1d1a6aea8abbd256bc2057f9792853 417 Gene3D G3DSA:2.40.37.10 17 404 6.9E-157 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AL543_08905 2c1d1a6aea8abbd256bc2057f9792853 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 58 76 7.9E-27 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL543_08905 2c1d1a6aea8abbd256bc2057f9792853 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 191 204 7.9E-27 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL543_08905 2c1d1a6aea8abbd256bc2057f9792853 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 78 90 7.9E-27 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL543_08905 2c1d1a6aea8abbd256bc2057f9792853 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 370 383 7.9E-27 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL543_08905 2c1d1a6aea8abbd256bc2057f9792853 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 272 291 7.9E-27 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL543_08905 2c1d1a6aea8abbd256bc2057f9792853 417 SUPERFAMILY SSF50621 259 414 7.12E-54 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AL543_08905 2c1d1a6aea8abbd256bc2057f9792853 417 Gene3D G3DSA:3.20.20.10 35 277 6.9E-157 T 11-10-2018 IPR029066 PLP-binding barrel AL543_08905 2c1d1a6aea8abbd256bc2057f9792853 417 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 58 76 - T 11-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site AL543_12945 075cfcc816b18bac25939745bba7bd84 244 Gene3D G3DSA:1.10.8.590 174 244 6.4E-30 T 11-10-2018 AL543_12945 075cfcc816b18bac25939745bba7bd84 244 Pfam PF00588 SpoU rRNA Methylase family 6 155 4.9E-33 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AL543_12945 075cfcc816b18bac25939745bba7bd84 244 SUPERFAMILY SSF75217 6 176 1.44E-36 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AL543_12945 075cfcc816b18bac25939745bba7bd84 244 PIRSF PIRSF004808 1 244 4.3E-74 T 11-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 AL543_12945 075cfcc816b18bac25939745bba7bd84 244 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 2 240 9.2E-84 T 11-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 AL543_12945 075cfcc816b18bac25939745bba7bd84 244 Gene3D G3DSA:3.40.1280.10 1 165 1.1E-62 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL543_14505 80f58454ed53d0e79b19127a26aa6e10 305 Gene3D G3DSA:3.40.630.30 100 300 5.2E-63 T 11-10-2018 AL543_14505 80f58454ed53d0e79b19127a26aa6e10 305 Pfam PF13523 Acetyltransferase (GNAT) domain 141 284 1.5E-51 T 11-10-2018 AL543_14505 80f58454ed53d0e79b19127a26aa6e10 305 SMART SM01006 137 184 2.7E-17 T 11-10-2018 IPR019432 Siderophore biosynthesis protein, conserved domain AL543_14505 80f58454ed53d0e79b19127a26aa6e10 305 SUPERFAMILY SSF55729 106 298 2.72E-60 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL543_11695 f50826e6df25c5100d8fa77d20167b8f 625 SUPERFAMILY SSF88946 115 458 2.49E-97 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AL543_11695 f50826e6df25c5100d8fa77d20167b8f 625 Gene3D G3DSA:1.10.10.10 464 540 2.7E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_11695 f50826e6df25c5100d8fa77d20167b8f 625 Pfam PF03979 Sigma-70 factor, region 1.1 4 80 8.1E-29 T 11-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 AL543_11695 f50826e6df25c5100d8fa77d20167b8f 625 PRINTS PR00046 Major sigma-70 factor signature 599 610 3.3E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL543_11695 f50826e6df25c5100d8fa77d20167b8f 625 PRINTS PR00046 Major sigma-70 factor signature 415 428 3.3E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL543_11695 f50826e6df25c5100d8fa77d20167b8f 625 PRINTS PR00046 Major sigma-70 factor signature 439 447 3.3E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL543_11695 f50826e6df25c5100d8fa77d20167b8f 625 PRINTS PR00046 Major sigma-70 factor signature 584 599 3.3E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL543_11695 f50826e6df25c5100d8fa77d20167b8f 625 PRINTS PR00046 Major sigma-70 factor signature 563 575 3.3E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL543_11695 f50826e6df25c5100d8fa77d20167b8f 625 Pfam PF00140 Sigma-70 factor, region 1.2 98 128 1.8E-12 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL543_11695 f50826e6df25c5100d8fa77d20167b8f 625 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 624 45.811 T 11-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 AL543_11695 f50826e6df25c5100d8fa77d20167b8f 625 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 584 610 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL543_11695 f50826e6df25c5100d8fa77d20167b8f 625 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 387 612 1.2E-37 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AL543_11695 f50826e6df25c5100d8fa77d20167b8f 625 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 415 428 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL543_11695 f50826e6df25c5100d8fa77d20167b8f 625 Gene3D G3DSA:1.10.10.10 541 625 3.4E-37 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_11695 f50826e6df25c5100d8fa77d20167b8f 625 SUPERFAMILY SSF88659 464 537 2.25E-20 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AL543_11695 f50826e6df25c5100d8fa77d20167b8f 625 Gene3D G3DSA:1.10.601.10 113 460 1.5E-137 T 11-10-2018 AL543_11695 f50826e6df25c5100d8fa77d20167b8f 625 Pfam PF04546 Sigma-70, non-essential region 139 360 2.2E-65 T 11-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL543_11695 f50826e6df25c5100d8fa77d20167b8f 625 Pfam PF04542 Sigma-70 region 2 391 460 1.7E-21 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AL543_11695 f50826e6df25c5100d8fa77d20167b8f 625 Pfam PF04539 Sigma-70 region 3 470 545 1.3E-28 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 AL543_11695 f50826e6df25c5100d8fa77d20167b8f 625 Pfam PF04545 Sigma-70, region 4 559 612 1.8E-19 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 AL543_11695 f50826e6df25c5100d8fa77d20167b8f 625 Gene3D G3DSA:1.10.220.120 1 64 3.8E-30 T 11-10-2018 AL543_11695 f50826e6df25c5100d8fa77d20167b8f 625 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 387 623 2.7E-120 T 11-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 AL543_11695 f50826e6df25c5100d8fa77d20167b8f 625 SUPERFAMILY SSF88659 521 623 1.31E-25 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AL543_02035 cea25fd64b266a03023e741ded301b9e 117 SUPERFAMILY SSF52821 10 114 2.62E-26 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AL543_02035 cea25fd64b266a03023e741ded301b9e 117 Pfam PF00581 Rhodanese-like domain 28 110 1.4E-13 T 11-10-2018 IPR001763 Rhodanese-like domain AL543_02035 cea25fd64b266a03023e741ded301b9e 117 Gene3D G3DSA:3.40.250.10 25 116 9.6E-26 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AL543_02035 cea25fd64b266a03023e741ded301b9e 117 SMART SM00450 25 117 2.4E-17 T 11-10-2018 IPR001763 Rhodanese-like domain AL543_16945 b897fdb4dcf282c17fadedcfe1a31779 673 SUPERFAMILY SSF58104 365 671 3.01E-56 T 11-10-2018 AL543_16945 b897fdb4dcf282c17fadedcfe1a31779 673 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 488 637 3.2E-36 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_16945 b897fdb4dcf282c17fadedcfe1a31779 673 SMART SM00283 410 671 4.6E-41 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_16945 b897fdb4dcf282c17fadedcfe1a31779 673 Gene3D G3DSA:1.10.287.950 343 673 7.1E-57 T 11-10-2018 AL543_03830 e1600b7ac6f0d77f58a1bd82939ffbc8 512 Pfam PF01266 FAD dependent oxidoreductase 15 333 1.1E-44 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL543_03830 e1600b7ac6f0d77f58a1bd82939ffbc8 512 Gene3D G3DSA:3.50.50.60 15 376 5.4E-137 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_03830 e1600b7ac6f0d77f58a1bd82939ffbc8 512 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 19 36 - T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AL543_03830 e1600b7ac6f0d77f58a1bd82939ffbc8 512 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 391 498 3.0E-12 T 11-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AL543_03830 e1600b7ac6f0d77f58a1bd82939ffbc8 512 SUPERFAMILY SSF54373 237 329 8.63E-5 T 11-10-2018 AL543_03830 e1600b7ac6f0d77f58a1bd82939ffbc8 512 Gene3D G3DSA:3.30.9.10 92 330 5.4E-137 T 11-10-2018 AL543_03830 e1600b7ac6f0d77f58a1bd82939ffbc8 512 SUPERFAMILY SSF51905 15 381 8.88E-28 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_03830 e1600b7ac6f0d77f58a1bd82939ffbc8 512 Gene3D G3DSA:1.10.8.870 400 470 5.1E-22 T 11-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AL543_03830 e1600b7ac6f0d77f58a1bd82939ffbc8 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 357 369 3.8E-28 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AL543_03830 e1600b7ac6f0d77f58a1bd82939ffbc8 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 43 55 3.8E-28 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AL543_03830 e1600b7ac6f0d77f58a1bd82939ffbc8 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 323 329 3.8E-28 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AL543_03830 e1600b7ac6f0d77f58a1bd82939ffbc8 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 14 26 3.8E-28 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AL543_03830 e1600b7ac6f0d77f58a1bd82939ffbc8 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 88 100 3.8E-28 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AL543_03830 e1600b7ac6f0d77f58a1bd82939ffbc8 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 27 37 3.8E-28 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AL543_18320 48e1e2d2850813f06b1cca2f65ca5464 135 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 7 123 1.2E-38 T 11-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AL543_18320 48e1e2d2850813f06b1cca2f65ca5464 135 SUPERFAMILY SSF54637 2 126 1.27E-40 T 11-10-2018 IPR029069 HotDog domain superfamily AL543_18320 48e1e2d2850813f06b1cca2f65ca5464 135 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 4 126 2.6E-51 T 11-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 AL543_18320 48e1e2d2850813f06b1cca2f65ca5464 135 Gene3D G3DSA:3.10.129.10 1 132 1.8E-42 T 11-10-2018 AL543_18320 48e1e2d2850813f06b1cca2f65ca5464 135 PIRSF PIRSF003230 1 133 2.7E-47 T 11-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AL543_18320 48e1e2d2850813f06b1cca2f65ca5464 135 Pfam PF03061 Thioesterase superfamily 18 101 8.7E-20 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AL543_13945 6da06dfdb81a56bdb49a0b9fa186a85c 474 Gene3D G3DSA:3.80.30.20 145 377 1.9E-83 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AL543_13945 6da06dfdb81a56bdb49a0b9fa186a85c 474 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 2.1E-151 T 11-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 AL543_13945 6da06dfdb81a56bdb49a0b9fa186a85c 474 Pfam PF04055 Radical SAM superfamily 151 325 5.1E-28 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL543_13945 6da06dfdb81a56bdb49a0b9fa186a85c 474 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 AL543_13945 6da06dfdb81a56bdb49a0b9fa186a85c 474 SUPERFAMILY SSF102114 123 374 8.24E-62 T 11-10-2018 AL543_13945 6da06dfdb81a56bdb49a0b9fa186a85c 474 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 440 1.9E-199 T 11-10-2018 AL543_13945 6da06dfdb81a56bdb49a0b9fa186a85c 474 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 2.9E-29 T 11-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 AL543_13945 6da06dfdb81a56bdb49a0b9fa186a85c 474 SMART SM00729 147 367 2.1E-64 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AL543_13945 6da06dfdb81a56bdb49a0b9fa186a85c 474 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 72.829 T 11-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 AL543_13945 6da06dfdb81a56bdb49a0b9fa186a85c 474 Pfam PF01938 TRAM domain 379 440 1.4E-17 T 11-10-2018 IPR002792 TRAM domain AL543_13945 6da06dfdb81a56bdb49a0b9fa186a85c 474 Gene3D G3DSA:3.40.50.12160 3 138 2.0E-33 T 11-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily AL543_07230 6465e919aea92d73248b1ddd55783139 573 SUPERFAMILY SSF52518 1 179 1.26E-65 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AL543_07230 6465e919aea92d73248b1ddd55783139 573 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 168 3.4E-59 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AL543_07230 6465e919aea92d73248b1ddd55783139 573 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 198 330 4.8E-46 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AL543_07230 6465e919aea92d73248b1ddd55783139 573 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 568 2.6E-269 T 11-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AL543_07230 6465e919aea92d73248b1ddd55783139 573 Gene3D G3DSA:3.40.50.970 1 180 1.6E-74 T 11-10-2018 AL543_07230 6465e919aea92d73248b1ddd55783139 573 SUPERFAMILY SSF52518 372 566 2.95E-66 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AL543_07230 6465e919aea92d73248b1ddd55783139 573 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 395 544 8.9E-49 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AL543_07230 6465e919aea92d73248b1ddd55783139 573 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 432 451 - T 11-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AL543_07230 6465e919aea92d73248b1ddd55783139 573 SUPERFAMILY SSF52467 190 363 1.44E-62 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AL543_07230 6465e919aea92d73248b1ddd55783139 573 Gene3D G3DSA:3.40.50.970 365 544 4.4E-126 T 11-10-2018 AL543_07230 6465e919aea92d73248b1ddd55783139 573 Gene3D G3DSA:3.40.50.1220 201 364 4.4E-126 T 11-10-2018 AL543_06330 51150e3073041ce26d0a1cee88a0ae25 182 SUPERFAMILY SSF50891 19 180 3.94E-52 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily AL543_06330 51150e3073041ce26d0a1cee88a0ae25 182 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 23 179 1.8E-41 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AL543_06330 51150e3073041ce26d0a1cee88a0ae25 182 Gene3D G3DSA:2.40.100.10 19 181 4.2E-57 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily AL543_06330 51150e3073041ce26d0a1cee88a0ae25 182 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 57 74 - T 11-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 AL543_06330 51150e3073041ce26d0a1cee88a0ae25 182 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 136 151 2.0E-10 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AL543_06330 51150e3073041ce26d0a1cee88a0ae25 182 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 36 51 2.0E-10 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AL543_06330 51150e3073041ce26d0a1cee88a0ae25 182 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 62 74 2.0E-10 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AL543_06330 51150e3073041ce26d0a1cee88a0ae25 182 PIRSF PIRSF001467 8 180 2.3E-22 T 11-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 AL543_15800 df6d0b9a82e207407ff41d3098f9959b 627 Pfam PF02743 Cache domain 38 258 3.2E-27 T 11-10-2018 IPR033479 Double Cache domain 1 AL543_15800 df6d0b9a82e207407ff41d3098f9959b 627 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 463 490 9.1E-22 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL543_15800 df6d0b9a82e207407ff41d3098f9959b 627 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 273 293 9.1E-22 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL543_15800 df6d0b9a82e207407ff41d3098f9959b 627 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 492 521 9.1E-22 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL543_15800 df6d0b9a82e207407ff41d3098f9959b 627 SMART SM00283 365 626 3.0E-65 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_15800 df6d0b9a82e207407ff41d3098f9959b 627 Gene3D G3DSA:3.30.450.20 47 270 7.3E-55 T 11-10-2018 AL543_15800 df6d0b9a82e207407ff41d3098f9959b 627 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 428 592 8.0E-40 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_15800 df6d0b9a82e207407ff41d3098f9959b 627 SUPERFAMILY SSF103190 85 175 1.88E-10 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily AL543_15800 df6d0b9a82e207407ff41d3098f9959b 627 SMART SM00304 352 403 15.0 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_15800 df6d0b9a82e207407ff41d3098f9959b 627 SMART SM00304 296 350 2.0E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_15800 df6d0b9a82e207407ff41d3098f9959b 627 Pfam PF00672 HAMP domain 300 346 6.2E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_15800 df6d0b9a82e207407ff41d3098f9959b 627 Gene3D G3DSA:1.10.287.950 296 627 1.8E-71 T 11-10-2018 AL543_15800 df6d0b9a82e207407ff41d3098f9959b 627 Gene3D G3DSA:3.30.450.20 60 168 7.3E-55 T 11-10-2018 AL543_15800 df6d0b9a82e207407ff41d3098f9959b 627 SUPERFAMILY SSF58104 318 627 2.88E-76 T 11-10-2018 AL543_15910 56e7d197beec280a322d3ce1386d05ae 292 SUPERFAMILY SSF103481 47 133 1.96E-5 T 11-10-2018 AL543_15910 56e7d197beec280a322d3ce1386d05ae 292 Pfam PF00892 EamA-like transporter family 146 276 1.8E-15 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL543_15910 56e7d197beec280a322d3ce1386d05ae 292 SUPERFAMILY SSF103481 182 279 1.96E-9 T 11-10-2018 AL543_07775 ae1a8c36dede30f90c9f333e24a65300 130 Gene3D G3DSA:3.30.1370.30 2 72 1.4E-26 T 11-10-2018 AL543_07775 ae1a8c36dede30f90c9f333e24a65300 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 31.287 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07775 ae1a8c36dede30f90c9f333e24a65300 130 Gene3D G3DSA:3.30.1490.10 73 130 3.9E-25 T 11-10-2018 AL543_07775 ae1a8c36dede30f90c9f333e24a65300 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07775 ae1a8c36dede30f90c9f333e24a65300 130 SUPERFAMILY SSF56047 2 129 2.35E-44 T 11-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07775 ae1a8c36dede30f90c9f333e24a65300 130 Pfam PF00410 Ribosomal protein S8 5 129 1.7E-47 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_12870 4074e510e7f79c1f5c78710905d064c6 236 SUPERFAMILY SSF109755 10 225 1.15E-70 T 11-10-2018 AL543_12870 4074e510e7f79c1f5c78710905d064c6 236 PIRSF PIRSF003107 4 223 5.0E-70 T 11-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 AL543_12870 4074e510e7f79c1f5c78710905d064c6 236 Gene3D G3DSA:1.20.58.220 115 232 4.2E-34 T 11-10-2018 IPR038078 PhoU-like domain superfamily AL543_12870 4074e510e7f79c1f5c78710905d064c6 236 Pfam PF01895 PhoU domain 23 109 1.1E-22 T 11-10-2018 IPR026022 PhoU domain AL543_12870 4074e510e7f79c1f5c78710905d064c6 236 Pfam PF01895 PhoU domain 128 210 1.9E-16 T 11-10-2018 IPR026022 PhoU domain AL543_12870 4074e510e7f79c1f5c78710905d064c6 236 Gene3D G3DSA:1.20.58.220 1 114 1.4E-40 T 11-10-2018 IPR038078 PhoU-like domain superfamily AL543_12870 4074e510e7f79c1f5c78710905d064c6 236 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 10 219 1.3E-78 T 11-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 AL543_02120 35aa16ae28138dba255e975a2f97955b 869 Gene3D G3DSA:3.40.50.300 561 772 6.5E-62 T 11-10-2018 AL543_02120 35aa16ae28138dba255e975a2f97955b 869 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 221 351 1.3E-9 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL543_02120 35aa16ae28138dba255e975a2f97955b 869 SMART SM01086 774 864 4.4E-10 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AL543_02120 35aa16ae28138dba255e975a2f97955b 869 Gene3D G3DSA:3.40.50.300 179 365 4.2E-59 T 11-10-2018 AL543_02120 35aa16ae28138dba255e975a2f97955b 869 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 657 675 3.3E-28 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AL543_02120 35aa16ae28138dba255e975a2f97955b 869 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 612 630 3.3E-28 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AL543_02120 35aa16ae28138dba255e975a2f97955b 869 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 686 704 3.3E-28 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AL543_02120 35aa16ae28138dba255e975a2f97955b 869 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 719 733 3.3E-28 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AL543_02120 35aa16ae28138dba255e975a2f97955b 869 SMART SM00382 608 756 1.4E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_02120 35aa16ae28138dba255e975a2f97955b 869 SMART SM00382 216 359 5.3E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_02120 35aa16ae28138dba255e975a2f97955b 869 SUPERFAMILY SSF52540 181 556 9.06E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_02120 35aa16ae28138dba255e975a2f97955b 869 Gene3D G3DSA:1.10.8.60 774 868 1.5E-9 T 11-10-2018 AL543_02120 35aa16ae28138dba255e975a2f97955b 869 SUPERFAMILY SSF52540 557 836 3.73E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_02120 35aa16ae28138dba255e975a2f97955b 869 SUPERFAMILY SSF81923 12 128 1.7E-13 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AL543_02120 35aa16ae28138dba255e975a2f97955b 869 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 24 71 5.3E-6 T 11-10-2018 IPR004176 Clp, N-terminal AL543_02120 35aa16ae28138dba255e975a2f97955b 869 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 642 660 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 AL543_02120 35aa16ae28138dba255e975a2f97955b 869 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 312 324 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 AL543_02120 35aa16ae28138dba255e975a2f97955b 869 Pfam PF07724 AAA domain (Cdc48 subfamily) 607 768 3.7E-37 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL543_02120 35aa16ae28138dba255e975a2f97955b 869 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 774 848 2.1E-11 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AL543_02120 35aa16ae28138dba255e975a2f97955b 869 Gene3D G3DSA:3.40.50.300 366 555 3.9E-47 T 11-10-2018 AL543_02120 35aa16ae28138dba255e975a2f97955b 869 Gene3D G3DSA:1.10.1780.10 5 159 1.7E-37 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AL543_02120 35aa16ae28138dba255e975a2f97955b 869 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 13 858 0.0 T 11-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 AL543_03440 685eb499fc4ae77fbc4ed7fd0266cdef 436 Gene3D G3DSA:3.30.70.420 163 278 6.9E-111 T 11-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL543_03440 685eb499fc4ae77fbc4ed7fd0266cdef 436 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 98 119 3.2E-37 T 11-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL543_03440 685eb499fc4ae77fbc4ed7fd0266cdef 436 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 218 236 3.2E-37 T 11-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL543_03440 685eb499fc4ae77fbc4ed7fd0266cdef 436 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 309 335 3.2E-37 T 11-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL543_03440 685eb499fc4ae77fbc4ed7fd0266cdef 436 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 129 149 3.2E-37 T 11-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL543_03440 685eb499fc4ae77fbc4ed7fd0266cdef 436 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 361 382 3.2E-37 T 11-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL543_03440 685eb499fc4ae77fbc4ed7fd0266cdef 436 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 259 284 3.2E-37 T 11-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL543_03440 685eb499fc4ae77fbc4ed7fd0266cdef 436 SUPERFAMILY SSF56542 30 426 7.72E-77 T 11-10-2018 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain superfamily GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL543_03440 685eb499fc4ae77fbc4ed7fd0266cdef 436 SUPERFAMILY SSF55035 163 278 1.44E-36 T 11-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL543_03440 685eb499fc4ae77fbc4ed7fd0266cdef 436 ProSitePatterns PS00318 Hydroxymethylglutaryl-coenzyme A reductases signature 2. 373 380 - T 11-10-2018 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL543_03440 685eb499fc4ae77fbc4ed7fd0266cdef 436 Pfam PF00368 Hydroxymethylglutaryl-coenzyme A reductase 83 436 1.5E-111 T 11-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL543_03440 685eb499fc4ae77fbc4ed7fd0266cdef 436 Gene3D G3DSA:3.90.770.10 109 422 6.9E-111 T 11-10-2018 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain superfamily GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL543_08930 eaf8af97299800acbfd4785c143f9b51 317 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 237 253 - T 11-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL543_08930 eaf8af97299800acbfd4785c143f9b51 317 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 12 219 7.7E-79 T 11-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL543_08930 eaf8af97299800acbfd4785c143f9b51 317 PRINTS PR00151 Porphobilinogen deaminase signature 51 71 1.5E-47 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL543_08930 eaf8af97299800acbfd4785c143f9b51 317 PRINTS PR00151 Porphobilinogen deaminase signature 149 166 1.5E-47 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL543_08930 eaf8af97299800acbfd4785c143f9b51 317 PRINTS PR00151 Porphobilinogen deaminase signature 130 147 1.5E-47 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL543_08930 eaf8af97299800acbfd4785c143f9b51 317 PRINTS PR00151 Porphobilinogen deaminase signature 82 101 1.5E-47 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL543_08930 eaf8af97299800acbfd4785c143f9b51 317 PRINTS PR00151 Porphobilinogen deaminase signature 236 253 1.5E-47 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL543_08930 eaf8af97299800acbfd4785c143f9b51 317 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 11 303 39.518 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL543_08930 eaf8af97299800acbfd4785c143f9b51 317 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 233 301 2.4E-20 T 11-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL543_08930 eaf8af97299800acbfd4785c143f9b51 317 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 12 303 3.0E-113 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL543_08930 eaf8af97299800acbfd4785c143f9b51 317 SUPERFAMILY SSF54782 226 315 2.75E-28 T 11-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL543_08930 eaf8af97299800acbfd4785c143f9b51 317 Gene3D G3DSA:3.40.190.10 106 205 7.1E-84 T 11-10-2018 AL543_08930 eaf8af97299800acbfd4785c143f9b51 317 Gene3D G3DSA:3.30.160.40 227 312 1.4E-28 T 11-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL543_08930 eaf8af97299800acbfd4785c143f9b51 317 PIRSF PIRSF001438 1 317 2.5E-120 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL543_08930 eaf8af97299800acbfd4785c143f9b51 317 SUPERFAMILY SSF53850 10 225 1.09E-83 T 11-10-2018 AL543_08930 eaf8af97299800acbfd4785c143f9b51 317 Gene3D G3DSA:3.40.190.10 12 222 7.1E-84 T 11-10-2018 AL543_09420 537dd71b9bfa9524de2f43d2474a70e2 485 Pfam PF02386 Cation transport protein 39 477 7.5E-92 T 11-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 AL543_09420 537dd71b9bfa9524de2f43d2474a70e2 485 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 85 468 7.0E-119 T 11-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 AL543_09420 537dd71b9bfa9524de2f43d2474a70e2 485 PIRSF PIRSF006247 1 485 6.0E-179 T 11-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 AL543_13885 8288062973ac0576ba5cbdfa39c51673 373 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 16 369 28.287 T 11-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL543_13885 8288062973ac0576ba5cbdfa39c51673 373 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 20 367 1.8E-138 T 11-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL543_13885 8288062973ac0576ba5cbdfa39c51673 373 Pfam PF01098 Cell cycle protein 23 367 1.2E-114 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL543_13885 8288062973ac0576ba5cbdfa39c51673 373 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 324 348 - T 11-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL543_08840 1c5a9a64ee851a13dca17e0811cccb74 337 Pfam PF01757 Acyltransferase family 7 327 1.3E-31 T 11-10-2018 IPR002656 Acyltransferase 3 GO:0016747 AL543_19045 6d2522ce1c4d734cfeb9c38a7ee006d1 846 SMART SM00495 28 74 3.3E-10 T 11-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL543_19045 6d2522ce1c4d734cfeb9c38a7ee006d1 846 SMART SM00495 276 325 2.2E-8 T 11-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL543_19045 6d2522ce1c4d734cfeb9c38a7ee006d1 846 SMART SM00636 522 824 6.5E-5 T 11-10-2018 IPR011583 Chitinase II GO:0008061 AL543_19045 6d2522ce1c4d734cfeb9c38a7ee006d1 846 SUPERFAMILY SSF51445 520 832 2.34E-48 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AL543_19045 6d2522ce1c4d734cfeb9c38a7ee006d1 846 Gene3D G3DSA:3.20.20.80 520 841 1.4E-78 T 11-10-2018 AL543_19045 6d2522ce1c4d734cfeb9c38a7ee006d1 846 Pfam PF00704 Glycosyl hydrolases family 18 523 824 6.8E-26 T 11-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 AL543_19045 6d2522ce1c4d734cfeb9c38a7ee006d1 846 Gene3D G3DSA:2.60.40.10 334 426 3.2E-22 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL543_19045 6d2522ce1c4d734cfeb9c38a7ee006d1 846 Gene3D G3DSA:2.60.40.10 177 270 1.8E-26 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL543_19045 6d2522ce1c4d734cfeb9c38a7ee006d1 846 Gene3D G3DSA:2.60.40.10 84 173 1.8E-21 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL543_19045 6d2522ce1c4d734cfeb9c38a7ee006d1 846 SUPERFAMILY SSF51055 19 77 2.35E-12 T 11-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL543_19045 6d2522ce1c4d734cfeb9c38a7ee006d1 846 Gene3D G3DSA:2.60.40.10 428 519 3.7E-22 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL543_19045 6d2522ce1c4d734cfeb9c38a7ee006d1 846 ProSitePatterns PS01095 Chitinases family 18 active site. 636 644 - T 11-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AL543_19045 6d2522ce1c4d734cfeb9c38a7ee006d1 846 Gene3D G3DSA:2.10.10.20 24 78 1.6E-10 T 11-10-2018 AL543_19625 dc9c97de02eadd1efca4013943e9d785 258 PIRSF PIRSF009320 1 64 1.3E-13 T 11-10-2018 AL543_19625 dc9c97de02eadd1efca4013943e9d785 258 PIRSF PIRSF009320 98 241 6.6E-8 T 11-10-2018 AL543_19625 dc9c97de02eadd1efca4013943e9d785 258 SUPERFAMILY SSF52540 1 252 9.77E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_19625 dc9c97de02eadd1efca4013943e9d785 258 Gene3D G3DSA:3.40.50.300 1 253 1.6E-67 T 11-10-2018 AL543_19625 dc9c97de02eadd1efca4013943e9d785 258 Pfam PF13614 AAA domain 4 180 1.8E-49 T 11-10-2018 IPR025669 AAA domain AL543_19190 3f2c85afd58d7cf6927da10f578964dd 566 SUPERFAMILY SSF56801 13 553 4.84E-147 T 11-10-2018 AL543_19190 3f2c85afd58d7cf6927da10f578964dd 566 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 11-10-2018 IPR020845 AMP-binding, conserved site AL543_19190 3f2c85afd58d7cf6927da10f578964dd 566 Gene3D G3DSA:3.40.50.12780 10 457 1.4E-115 T 11-10-2018 AL543_19190 3f2c85afd58d7cf6927da10f578964dd 566 Pfam PF13193 AMP-binding enzyme C-terminal domain 470 544 1.8E-16 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL543_19190 3f2c85afd58d7cf6927da10f578964dd 566 Gene3D G3DSA:3.30.300.310 458 559 2.7E-28 T 11-10-2018 AL543_19190 3f2c85afd58d7cf6927da10f578964dd 566 Pfam PF00501 AMP-binding enzyme 29 461 8.5E-106 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AL543_01095 dcde1b087bf924eaac811fd2f2de89a8 496 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 418 438 - T 11-10-2018 IPR018212 Sodium/solute symporter, conserved site AL543_01095 dcde1b087bf924eaac811fd2f2de89a8 496 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 6 485 2.4E-215 T 11-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 AL543_01095 dcde1b087bf924eaac811fd2f2de89a8 496 Pfam PF00474 Sodium:solute symporter family 35 436 3.6E-106 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AL543_01095 dcde1b087bf924eaac811fd2f2de89a8 496 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 436 1.7E-93 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AL543_01095 dcde1b087bf924eaac811fd2f2de89a8 496 Gene3D G3DSA:1.20.1730.10 7 495 5.6E-96 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily AL543_15840 fc306f978a3503bf5edf6da854da833b 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 299 328 7.3E-8 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL543_15840 fc306f978a3503bf5edf6da854da833b 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 398 427 7.3E-8 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL543_15840 fc306f978a3503bf5edf6da854da833b 543 Gene3D G3DSA:1.10.287.950 203 534 3.5E-63 T 11-10-2018 AL543_15840 fc306f978a3503bf5edf6da854da833b 543 SMART SM00304 203 256 0.0016 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_15840 fc306f978a3503bf5edf6da854da833b 543 SUPERFAMILY SSF58104 224 534 1.31E-62 T 11-10-2018 AL543_15840 fc306f978a3503bf5edf6da854da833b 543 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 323 497 6.4E-39 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_15840 fc306f978a3503bf5edf6da854da833b 543 SMART SM00283 271 532 7.8E-54 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_01795 63303585ecb8d650ed863e87be93f7b1 433 PIRSF PIRSF006066 4 433 8.6E-167 T 11-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 AL543_01795 63303585ecb8d650ed863e87be93f7b1 433 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 20 427 3.5E-138 T 11-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 AL543_01795 63303585ecb8d650ed863e87be93f7b1 433 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 10 422 8.9E-116 T 11-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AL543_20165 07f79c310ae77068b3c2d41e60e2c73e 205 SUPERFAMILY SSF89392 20 202 1.92E-50 T 11-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX AL543_20165 07f79c310ae77068b3c2d41e60e2c73e 205 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 7 202 7.3E-42 T 11-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 AL543_20165 07f79c310ae77068b3c2d41e60e2c73e 205 Gene3D G3DSA:2.50.20.10 25 203 3.0E-53 T 11-10-2018 AL543_20165 07f79c310ae77068b3c2d41e60e2c73e 205 Pfam PF03550 Outer membrane lipoprotein LolB 44 201 1.3E-45 T 11-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 AL543_20165 07f79c310ae77068b3c2d41e60e2c73e 205 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 4 203 27.535 T 11-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 AL543_02240 5039df80a47d2f18869625f69df5e46b 389 Gene3D G3DSA:2.10.10.20 346 389 3.2E-18 T 11-10-2018 AL543_02240 5039df80a47d2f18869625f69df5e46b 389 Gene3D G3DSA:2.70.50.50 26 219 1.1E-63 T 11-10-2018 AL543_02240 5039df80a47d2f18869625f69df5e46b 389 SUPERFAMILY SSF81296 26 218 6.3E-49 T 11-10-2018 IPR014756 Immunoglobulin E-set AL543_02240 5039df80a47d2f18869625f69df5e46b 389 SUPERFAMILY SSF51055 340 386 1.7E-12 T 11-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL543_02240 5039df80a47d2f18869625f69df5e46b 389 SMART SM00495 346 389 1.4E-9 T 11-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL543_02240 5039df80a47d2f18869625f69df5e46b 389 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 26 214 5.5E-39 T 11-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal AL543_02240 5039df80a47d2f18869625f69df5e46b 389 Pfam PF02839 Carbohydrate binding domain 363 388 2.9E-5 T 11-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL543_13890 169ae6a2bf5761e79c62100846947766 634 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 21 619 9.9E-239 T 11-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL543_13890 169ae6a2bf5761e79c62100846947766 634 SUPERFAMILY SSF56601 255 619 5.25E-95 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AL543_13890 169ae6a2bf5761e79c62100846947766 634 Gene3D G3DSA:3.90.1310.10 65 249 3.4E-54 T 11-10-2018 AL543_13890 169ae6a2bf5761e79c62100846947766 634 Pfam PF03717 Penicillin-binding Protein dimerisation domain 65 240 2.6E-50 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AL543_13890 169ae6a2bf5761e79c62100846947766 634 Gene3D G3DSA:3.30.1390.30 86 161 3.4E-54 T 11-10-2018 AL543_13890 169ae6a2bf5761e79c62100846947766 634 SUPERFAMILY SSF56519 57 253 1.11E-56 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 AL543_13890 169ae6a2bf5761e79c62100846947766 634 Pfam PF00905 Penicillin binding protein transpeptidase domain 272 616 2.7E-76 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AL543_13890 169ae6a2bf5761e79c62100846947766 634 Gene3D G3DSA:3.40.710.10 250 632 1.1E-94 T 11-10-2018 AL543_13890 169ae6a2bf5761e79c62100846947766 634 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 4 623 53.069 T 11-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL543_03275 2be8ff001055a646cd059c295581a362 774 Gene3D G3DSA:3.40.50.740 110 195 9.1E-7 T 11-10-2018 AL543_03275 2be8ff001055a646cd059c295581a362 774 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 14 762 8.9E-287 T 11-10-2018 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 AL543_03275 2be8ff001055a646cd059c295581a362 774 SUPERFAMILY SSF50692 644 765 1.49E-15 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily AL543_03275 2be8ff001055a646cd059c295581a362 774 Gene3D G3DSA:3.40.228.10 196 430 4.2E-60 T 11-10-2018 AL543_03275 2be8ff001055a646cd059c295581a362 774 SUPERFAMILY SSF53706 48 632 3.93E-145 T 11-10-2018 AL543_03275 2be8ff001055a646cd059c295581a362 774 Pfam PF00384 Molybdopterin oxidoreductase 110 494 2.8E-22 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL543_03275 2be8ff001055a646cd059c295581a362 774 PIRSF PIRSF000144 1 767 0.0 T 11-10-2018 AL543_03275 2be8ff001055a646cd059c295581a362 774 Pfam PF01568 Molydopterin dinucleotide binding domain 649 735 8.3E-6 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 AL543_17690 88007c8e4d2dfe69a255abaeb1eed849 540 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 78 456 4.3E-80 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain AL543_17690 88007c8e4d2dfe69a255abaeb1eed849 540 SUPERFAMILY SSF53850 35 535 4.52E-129 T 11-10-2018 AL543_17690 88007c8e4d2dfe69a255abaeb1eed849 540 Gene3D G3DSA:3.40.190.10 217 526 6.2E-141 T 11-10-2018 AL543_17690 88007c8e4d2dfe69a255abaeb1eed849 540 Gene3D G3DSA:3.10.105.10 296 514 6.2E-141 T 11-10-2018 AL543_17690 88007c8e4d2dfe69a255abaeb1eed849 540 Gene3D G3DSA:3.90.76.10 44 216 6.2E-141 T 11-10-2018 AL543_17690 88007c8e4d2dfe69a255abaeb1eed849 540 PIRSF PIRSF002741 1 539 6.7E-91 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL543_16630 937df83257f473d8ccce2aa794108ccd 326 Gene3D G3DSA:1.20.58.1490 1 94 4.2E-34 T 11-10-2018 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily AL543_16630 937df83257f473d8ccce2aa794108ccd 326 Gene3D G3DSA:1.10.760.10 145 320 1.8E-73 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL543_16630 937df83257f473d8ccce2aa794108ccd 326 PRINTS PR00605 Class IC cytochrome C signature 295 317 1.4E-5 T 11-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AL543_16630 937df83257f473d8ccce2aa794108ccd 326 PRINTS PR00605 Class IC cytochrome C signature 166 177 1.4E-5 T 11-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AL543_16630 937df83257f473d8ccce2aa794108ccd 326 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 39 83 1.3E-23 T 11-10-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal AL543_16630 937df83257f473d8ccce2aa794108ccd 326 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 243 317 6.7E-10 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL543_16630 937df83257f473d8ccce2aa794108ccd 326 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 156 229 8.9E-14 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL543_16630 937df83257f473d8ccce2aa794108ccd 326 PIRSF PIRSF000006 1 324 2.7E-107 T 11-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III AL543_16630 937df83257f473d8ccce2aa794108ccd 326 SUPERFAMILY SSF46626 240 322 5.91E-22 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL543_16630 937df83257f473d8ccce2aa794108ccd 326 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 113 323 2.4E-57 T 11-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III AL543_16630 937df83257f473d8ccce2aa794108ccd 326 Gene3D G3DSA:1.10.760.10 211 297 1.8E-73 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL543_16630 937df83257f473d8ccce2aa794108ccd 326 SUPERFAMILY SSF46626 55 240 2.91E-30 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL543_12125 2e3d0e59679abaf8356a3b5a2a5b3fbf 764 Pfam PF01734 Patatin-like phospholipase 37 228 1.2E-29 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AL543_12125 2e3d0e59679abaf8356a3b5a2a5b3fbf 764 Gene3D G3DSA:3.10.20.310 339 421 6.3E-10 T 11-10-2018 AL543_12125 2e3d0e59679abaf8356a3b5a2a5b3fbf 764 Gene3D G3DSA:3.40.1090.10 135 283 7.5E-19 T 11-10-2018 AL543_12125 2e3d0e59679abaf8356a3b5a2a5b3fbf 764 Gene3D G3DSA:3.40.1090.10 20 127 3.5E-28 T 11-10-2018 AL543_12125 2e3d0e59679abaf8356a3b5a2a5b3fbf 764 Pfam PF07244 Surface antigen variable number repeat 348 418 3.1E-7 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AL543_12125 2e3d0e59679abaf8356a3b5a2a5b3fbf 764 SUPERFAMILY SSF52151 31 325 2.41E-57 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AL543_00020 585cef120cb80afbdeadd72e353711dd 401 ProSitePatterns PS00216 Sugar transport proteins signature 1. 63 80 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AL543_00020 585cef120cb80afbdeadd72e353711dd 401 Gene3D G3DSA:1.20.1720.10 10 384 2.8E-70 T 11-10-2018 AL543_00020 585cef120cb80afbdeadd72e353711dd 401 SUPERFAMILY SSF103473 8 389 7.72E-51 T 11-10-2018 IPR036259 MFS transporter superfamily AL543_00020 585cef120cb80afbdeadd72e353711dd 401 Pfam PF07690 Major Facilitator Superfamily 17 347 1.5E-39 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL543_06440 52b97d0cb4622f82494ac790fe14308f 343 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 253 285 4.8E-13 T 11-10-2018 IPR001451 Hexapeptide repeat AL543_06440 52b97d0cb4622f82494ac790fe14308f 343 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 2 340 46.79 T 11-10-2018 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117 AL543_06440 52b97d0cb4622f82494ac790fe14308f 343 Gene3D G3DSA:2.160.10.10 172 343 6.5E-70 T 11-10-2018 AL543_06440 52b97d0cb4622f82494ac790fe14308f 343 Gene3D G3DSA:3.30.70.2010 1 130 1.3E-39 T 11-10-2018 AL543_06440 52b97d0cb4622f82494ac790fe14308f 343 Pfam PF14790 Tetrahydrodipicolinate N-succinyltransferase N-terminal 76 129 9.3E-6 T 11-10-2018 AL543_06440 52b97d0cb4622f82494ac790fe14308f 343 Gene3D G3DSA:3.30.60.70 131 171 3.5E-20 T 11-10-2018 IPR038361 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain superfamily KEGG: 00300+2.3.1.117 AL543_06440 52b97d0cb4622f82494ac790fe14308f 343 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 131 171 5.8E-16 T 11-10-2018 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117 AL543_06440 52b97d0cb4622f82494ac790fe14308f 343 TIGRFAM TIGR03536 DapD_gpp: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 3 343 8.9E-178 T 11-10-2018 IPR019876 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, gammaproteobacteria KEGG: 00300+2.3.1.117 AL543_06440 52b97d0cb4622f82494ac790fe14308f 343 SUPERFAMILY SSF51161 90 323 2.77E-36 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AL543_01495 82d42599b3fb2ee0b6d91189f1310905 251 Gene3D G3DSA:2.40.10.220 137 251 4.9E-44 T 11-10-2018 AL543_01495 82d42599b3fb2ee0b6d91189f1310905 251 Gene3D G3DSA:2.30.110.10 23 136 1.6E-48 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AL543_01495 82d42599b3fb2ee0b6d91189f1310905 251 SUPERFAMILY SSF141371 24 137 2.9E-33 T 11-10-2018 AL543_01495 82d42599b3fb2ee0b6d91189f1310905 251 Pfam PF07238 PilZ domain 134 237 6.2E-12 T 11-10-2018 IPR009875 PilZ domain GO:0035438 AL543_01495 82d42599b3fb2ee0b6d91189f1310905 251 Pfam PF12945 Flagellar protein YcgR 38 127 2.6E-14 T 11-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal AL543_01495 82d42599b3fb2ee0b6d91189f1310905 251 SUPERFAMILY SSF141371 138 246 4.12E-32 T 11-10-2018 AL543_10375 053f3be23a8e482d39d12ee68b3c0861 307 SUPERFAMILY SSF51735 93 273 3.89E-42 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_10375 053f3be23a8e482d39d12ee68b3c0861 307 SUPERFAMILY SSF52283 29 104 8.16E-7 T 11-10-2018 AL543_10375 053f3be23a8e482d39d12ee68b3c0861 307 Gene3D G3DSA:3.40.50.720 91 276 4.1E-93 T 11-10-2018 AL543_10375 053f3be23a8e482d39d12ee68b3c0861 307 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 99 272 3.5E-43 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AL543_10375 053f3be23a8e482d39d12ee68b3c0861 307 Gene3D G3DSA:3.40.50.720 33 299 4.1E-93 T 11-10-2018 AL543_16355 443ac0ec3fd2a875325ece1a5c929973 140 SUPERFAMILY SSF55298 4 127 2.83E-25 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AL543_16355 443ac0ec3fd2a875325ece1a5c929973 140 Pfam PF01042 Endoribonuclease L-PSP 12 125 2.4E-19 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 AL543_16355 443ac0ec3fd2a875325ece1a5c929973 140 Gene3D G3DSA:3.30.1330.40 4 125 2.2E-24 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AL543_01075 6cd739edb32ebf5137cd012beee17dc9 479 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 225 232 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AL543_01075 6cd739edb32ebf5137cd012beee17dc9 479 SUPERFAMILY SSF53720 25 450 1.31E-107 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AL543_01075 6cd739edb32ebf5137cd012beee17dc9 479 Gene3D G3DSA:3.40.309.10 229 429 5.6E-147 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AL543_01075 6cd739edb32ebf5137cd012beee17dc9 479 Pfam PF00171 Aldehyde dehydrogenase family 40 449 1.8E-85 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AL543_01075 6cd739edb32ebf5137cd012beee17dc9 479 Gene3D G3DSA:3.40.605.10 33 449 5.6E-147 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AL543_01075 6cd739edb32ebf5137cd012beee17dc9 479 PIRSF PIRSF036492 5 477 1.6E-154 T 11-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 AL543_02040 5cb810aa2d4af40459162799d45424e5 538 Gene3D G3DSA:3.20.20.450 281 522 5.7E-68 T 11-10-2018 IPR035919 EAL domain superfamily AL543_02040 5cb810aa2d4af40459162799d45424e5 538 Pfam PF00563 EAL domain 290 514 2.6E-56 T 11-10-2018 IPR001633 EAL domain AL543_02040 5cb810aa2d4af40459162799d45424e5 538 SMART SM00052 281 519 4.6E-77 T 11-10-2018 IPR001633 EAL domain AL543_02040 5cb810aa2d4af40459162799d45424e5 538 SUPERFAMILY SSF141868 288 525 3.14E-68 T 11-10-2018 IPR035919 EAL domain superfamily AL543_14855 22b42b290c7c98b111daa177feedabbb 435 SUPERFAMILY SSF46589 1 114 5.75E-26 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 AL543_14855 22b42b290c7c98b111daa177feedabbb 435 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 433 39.99 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AL543_14855 22b42b290c7c98b111daa177feedabbb 435 PRINTS PR00981 Seryl-tRNA synthetase signature 327 340 2.0E-33 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AL543_14855 22b42b290c7c98b111daa177feedabbb 435 PRINTS PR00981 Seryl-tRNA synthetase signature 344 360 2.0E-33 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AL543_14855 22b42b290c7c98b111daa177feedabbb 435 PRINTS PR00981 Seryl-tRNA synthetase signature 275 287 2.0E-33 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AL543_14855 22b42b290c7c98b111daa177feedabbb 435 PRINTS PR00981 Seryl-tRNA synthetase signature 287 300 2.0E-33 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AL543_14855 22b42b290c7c98b111daa177feedabbb 435 PRINTS PR00981 Seryl-tRNA synthetase signature 362 378 2.0E-33 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AL543_14855 22b42b290c7c98b111daa177feedabbb 435 Gene3D G3DSA:1.10.287.40 1 106 3.7E-20 T 11-10-2018 AL543_14855 22b42b290c7c98b111daa177feedabbb 435 SUPERFAMILY SSF55681 118 431 1.36E-97 T 11-10-2018 AL543_14855 22b42b290c7c98b111daa177feedabbb 435 Gene3D G3DSA:3.30.930.10 107 434 6.8E-113 T 11-10-2018 AL543_14855 22b42b290c7c98b111daa177feedabbb 435 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 428 1.1E-172 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AL543_14855 22b42b290c7c98b111daa177feedabbb 435 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 109 8.9E-29 T 11-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 AL543_14855 22b42b290c7c98b111daa177feedabbb 435 PIRSF PIRSF001529 1 435 3.8E-190 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AL543_14855 22b42b290c7c98b111daa177feedabbb 435 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 230 411 5.9E-34 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL543_06960 adfa66c58077e8161f7f47ca8fb31c4c 272 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 203 258 5.0E-27 T 11-10-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 AL543_06960 adfa66c58077e8161f7f47ca8fb31c4c 272 Pfam PF00149 Calcineurin-like phosphoesterase 13 204 3.8E-15 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AL543_06960 adfa66c58077e8161f7f47ca8fb31c4c 272 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 12 258 41.029 T 11-10-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 AL543_06960 adfa66c58077e8161f7f47ca8fb31c4c 272 Gene3D G3DSA:3.60.21.10 2 269 7.4E-70 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like AL543_06960 adfa66c58077e8161f7f47ca8fb31c4c 272 SUPERFAMILY SSF56300 12 270 2.43E-56 T 11-10-2018 AL543_15020 7677f9232a593e7c18a1aa734f61b7e0 106 Gene3D G3DSA:3.30.1390.10 1 106 3.8E-45 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AL543_15020 7677f9232a593e7c18a1aa734f61b7e0 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 9 101 27.773 T 11-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS AL543_15020 7677f9232a593e7c18a1aa734f61b7e0 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 23 102 3.4E-33 T 11-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 AL543_15020 7677f9232a593e7c18a1aa734f61b7e0 106 SUPERFAMILY SSF54736 22 105 4.29E-32 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AL543_08360 8cab535d93b68d1b888921300745e10d 207 Gene3D G3DSA:3.30.63.10 37 96 5.1E-74 T 11-10-2018 AL543_08360 8cab535d93b68d1b888921300745e10d 207 SUPERFAMILY SSF52540 3 189 3.83E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_08360 8cab535d93b68d1b888921300745e10d 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 4.1E-76 T 11-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 AL543_08360 8cab535d93b68d1b888921300745e10d 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 11-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 AL543_08360 8cab535d93b68d1b888921300745e10d 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 37.923 T 11-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 AL543_08360 8cab535d93b68d1b888921300745e10d 207 Pfam PF00625 Guanylate kinase 5 185 1.2E-60 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AL543_08360 8cab535d93b68d1b888921300745e10d 207 SMART SM00072 3 187 2.3E-73 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AL543_08360 8cab535d93b68d1b888921300745e10d 207 Gene3D G3DSA:3.40.50.300 8 183 5.1E-74 T 11-10-2018 AL543_07790 72999f063f8685aa14f3587c96a7027c 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 19.983 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_07790 72999f063f8685aa14f3587c96a7027c 105 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 11-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_07790 72999f063f8685aa14f3587c96a7027c 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 8.1E-40 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_07790 72999f063f8685aa14f3587c96a7027c 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 102 3.4E-23 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_07790 72999f063f8685aa14f3587c96a7027c 105 SUPERFAMILY SSF50104 4 102 1.02E-33 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily AL543_07790 72999f063f8685aa14f3587c96a7027c 105 Gene3D G3DSA:2.30.30.30 2 104 3.8E-39 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 AL543_07790 72999f063f8685aa14f3587c96a7027c 105 SMART SM00739 4 31 5.3E-4 T 11-10-2018 IPR005824 KOW AL543_07790 72999f063f8685aa14f3587c96a7027c 105 Pfam PF00467 KOW motif 9 37 7.5E-6 T 11-10-2018 IPR005824 KOW AL543_09790 b8f4eb9be95b77022f4fc8fb3ae2c64a 305 PRINTS PR00073 Coprogen oxidase signature 32 48 1.2E-68 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL543_09790 b8f4eb9be95b77022f4fc8fb3ae2c64a 305 PRINTS PR00073 Coprogen oxidase signature 239 266 1.2E-68 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL543_09790 b8f4eb9be95b77022f4fc8fb3ae2c64a 305 PRINTS PR00073 Coprogen oxidase signature 267 293 1.2E-68 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL543_09790 b8f4eb9be95b77022f4fc8fb3ae2c64a 305 PRINTS PR00073 Coprogen oxidase signature 167 196 1.2E-68 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL543_09790 b8f4eb9be95b77022f4fc8fb3ae2c64a 305 PRINTS PR00073 Coprogen oxidase signature 95 119 1.2E-68 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL543_09790 b8f4eb9be95b77022f4fc8fb3ae2c64a 305 PRINTS PR00073 Coprogen oxidase signature 130 152 1.2E-68 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL543_09790 b8f4eb9be95b77022f4fc8fb3ae2c64a 305 Pfam PF01218 Coproporphyrinogen III oxidase 10 305 7.9E-130 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL543_09790 b8f4eb9be95b77022f4fc8fb3ae2c64a 305 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 171 195 - T 11-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL543_09790 b8f4eb9be95b77022f4fc8fb3ae2c64a 305 Gene3D G3DSA:3.40.1500.10 1 305 5.4E-136 T 11-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL543_09790 b8f4eb9be95b77022f4fc8fb3ae2c64a 305 SUPERFAMILY SSF102886 6 305 7.46E-136 T 11-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL543_09790 b8f4eb9be95b77022f4fc8fb3ae2c64a 305 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 4 282 56.095 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL543_09790 b8f4eb9be95b77022f4fc8fb3ae2c64a 305 PIRSF PIRSF000166 1 305 4.2E-126 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL543_16315 f9d17767d0a2f8710cf72226c16c8ae1 311 Gene3D G3DSA:1.10.10.10 12 99 3.5E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_16315 f9d17767d0a2f8710cf72226c16c8ae1 311 Pfam PF03466 LysR substrate binding domain 100 299 6.6E-39 T 11-10-2018 IPR005119 LysR, substrate-binding AL543_16315 f9d17767d0a2f8710cf72226c16c8ae1 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 73 3.7E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_16315 f9d17767d0a2f8710cf72226c16c8ae1 311 Gene3D G3DSA:3.40.190.290 102 300 5.7E-51 T 11-10-2018 AL543_16315 f9d17767d0a2f8710cf72226c16c8ae1 311 SUPERFAMILY SSF46785 10 119 4.09E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_16315 f9d17767d0a2f8710cf72226c16c8ae1 311 SUPERFAMILY SSF53850 100 303 4.89E-37 T 11-10-2018 AL543_11740 1bddd1adefe0a19ac640758c1bafb2e7 168 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 129 5.0E-32 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AL543_11740 1bddd1adefe0a19ac640758c1bafb2e7 168 SUPERFAMILY SSF55083 1 148 2.22E-37 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AL543_11740 1bddd1adefe0a19ac640758c1bafb2e7 168 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 129 8.9E-25 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AL543_11740 1bddd1adefe0a19ac640758c1bafb2e7 168 Gene3D G3DSA:3.30.70.560 2 153 2.3E-33 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AL543_06130 dc969d94a3fbaf5929d72600cac465ac 243 Gene3D G3DSA:3.40.1160.10 3 242 6.5E-76 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AL543_06130 dc969d94a3fbaf5929d72600cac465ac 243 Pfam PF00696 Amino acid kinase family 11 219 9.4E-27 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AL543_06130 dc969d94a3fbaf5929d72600cac465ac 243 SUPERFAMILY SSF53633 7 240 7.72E-72 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AL543_06130 dc969d94a3fbaf5929d72600cac465ac 243 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 44.259 T 11-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 AL543_06130 dc969d94a3fbaf5929d72600cac465ac 243 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 1.7E-102 T 11-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 AL543_06130 dc969d94a3fbaf5929d72600cac465ac 243 PIRSF PIRSF005650 4 243 6.6E-89 T 11-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 AL543_16595 725b672f9a2bb69271bade1a8505ef9b 310 SUPERFAMILY SSF52402 29 254 8.56E-57 T 11-10-2018 AL543_16595 725b672f9a2bb69271bade1a8505ef9b 310 PIRSF PIRSF004976 2 272 4.2E-75 T 11-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 AL543_16595 725b672f9a2bb69271bade1a8505ef9b 310 Gene3D G3DSA:3.40.50.620 2 262 5.7E-50 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL543_16595 725b672f9a2bb69271bade1a8505ef9b 310 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 3 270 57.773 T 11-10-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 AL543_16595 725b672f9a2bb69271bade1a8505ef9b 310 Pfam PF01171 PP-loop family 43 203 6.5E-15 T 11-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 AL543_00810 4dbfe2e66c492420798f93732838daaf 442 SUPERFAMILY SSF53098 110 374 5.61E-27 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_00810 4dbfe2e66c492420798f93732838daaf 442 Pfam PF01609 Transposase DDE domain 127 352 1.5E-25 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AL543_00810 4dbfe2e66c492420798f93732838daaf 442 Pfam PF13006 Insertion element 4 transposase N-terminal 18 108 6.4E-28 T 11-10-2018 IPR024473 Transposase, IS4, N-terminal AL543_15105 4dbfe2e66c492420798f93732838daaf 442 SUPERFAMILY SSF53098 110 374 5.61E-27 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_15105 4dbfe2e66c492420798f93732838daaf 442 Pfam PF01609 Transposase DDE domain 127 352 1.5E-25 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AL543_15105 4dbfe2e66c492420798f93732838daaf 442 Pfam PF13006 Insertion element 4 transposase N-terminal 18 108 6.4E-28 T 11-10-2018 IPR024473 Transposase, IS4, N-terminal AL543_04140 47bc92a7900044c950e26f83da8efa4a 300 SUPERFAMILY SSF103481 45 141 1.83E-7 T 11-10-2018 AL543_04140 47bc92a7900044c950e26f83da8efa4a 300 TIGRFAM TIGR03340 phn_DUF6: phosphonate utilization associated putative membrane protein 5 297 2.5E-118 T 11-10-2018 IPR017725 Phosphonate utilization associated transmembrane protein, putative AL543_04140 47bc92a7900044c950e26f83da8efa4a 300 SUPERFAMILY SSF103481 199 298 7.85E-8 T 11-10-2018 AL543_04140 47bc92a7900044c950e26f83da8efa4a 300 Pfam PF00892 EamA-like transporter family 152 298 1.3E-8 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL543_04140 47bc92a7900044c950e26f83da8efa4a 300 Pfam PF00892 EamA-like transporter family 5 136 1.5E-6 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL543_15915 6958da32dd32d4794a6fbc28125f08bd 407 SUPERFAMILY SSF51419 47 281 1.57E-47 T 11-10-2018 IPR029066 PLP-binding barrel AL543_15915 6958da32dd32d4794a6fbc28125f08bd 407 Pfam PF01168 Alanine racemase, N-terminal domain 47 270 2.2E-50 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL543_15915 6958da32dd32d4794a6fbc28125f08bd 407 PRINTS PR00992 Alanine racemase signature 332 349 6.2E-33 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL543_15915 6958da32dd32d4794a6fbc28125f08bd 407 PRINTS PR00992 Alanine racemase signature 164 176 6.2E-33 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL543_15915 6958da32dd32d4794a6fbc28125f08bd 407 PRINTS PR00992 Alanine racemase signature 311 326 6.2E-33 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL543_15915 6958da32dd32d4794a6fbc28125f08bd 407 PRINTS PR00992 Alanine racemase signature 66 82 6.2E-33 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL543_15915 6958da32dd32d4794a6fbc28125f08bd 407 PRINTS PR00992 Alanine racemase signature 102 120 6.2E-33 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL543_15915 6958da32dd32d4794a6fbc28125f08bd 407 PRINTS PR00992 Alanine racemase signature 243 270 6.2E-33 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL543_15915 6958da32dd32d4794a6fbc28125f08bd 407 PRINTS PR00992 Alanine racemase signature 200 211 6.2E-33 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL543_15915 6958da32dd32d4794a6fbc28125f08bd 407 SMART SM01005 278 406 1.9E-49 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL543_15915 6958da32dd32d4794a6fbc28125f08bd 407 TIGRFAM TIGR00492 alr: alanine racemase 43 406 2.7E-70 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL543_15915 6958da32dd32d4794a6fbc28125f08bd 407 SUPERFAMILY SSF50621 271 406 6.28E-41 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AL543_15915 6958da32dd32d4794a6fbc28125f08bd 407 Gene3D G3DSA:3.20.20.10 49 266 3.5E-132 T 11-10-2018 IPR029066 PLP-binding barrel AL543_15915 6958da32dd32d4794a6fbc28125f08bd 407 Gene3D G3DSA:2.40.37.10 43 402 3.5E-132 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AL543_15915 6958da32dd32d4794a6fbc28125f08bd 407 Pfam PF00842 Alanine racemase, C-terminal domain 279 405 9.3E-33 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL543_15915 6958da32dd32d4794a6fbc28125f08bd 407 Hamap MF_01201 Alanine racemase. 40 406 26.197 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL543_15915 6958da32dd32d4794a6fbc28125f08bd 407 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 71 81 - T 11-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL543_14320 6c69d0ce74a0a68529dfaebf3bc7909f 201 Gene3D G3DSA:3.40.50.300 11 201 1.5E-70 T 11-10-2018 AL543_14320 6c69d0ce74a0a68529dfaebf3bc7909f 201 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 7 26 3.9E-7 T 11-10-2018 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17 AL543_14320 6c69d0ce74a0a68529dfaebf3bc7909f 201 PIRSF PIRSF015617 6 201 4.3E-66 T 11-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 AL543_14320 6c69d0ce74a0a68529dfaebf3bc7909f 201 SUPERFAMILY SSF52540 12 201 1.71E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_14320 6c69d0ce74a0a68529dfaebf3bc7909f 201 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 32 201 2.1E-58 T 11-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 AL543_14320 6c69d0ce74a0a68529dfaebf3bc7909f 201 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 29 201 2.4E-70 T 11-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 AL543_17370 996e935539f9d00f2617c33f98a90b1d 212 PRINTS PR01021 OMPA domain signature 138 154 5.2E-9 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL543_17370 996e935539f9d00f2617c33f98a90b1d 212 PRINTS PR01021 OMPA domain signature 93 115 5.2E-9 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL543_17370 996e935539f9d00f2617c33f98a90b1d 212 PRINTS PR01021 OMPA domain signature 123 138 5.2E-9 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL543_17370 996e935539f9d00f2617c33f98a90b1d 212 Pfam PF00691 OmpA family 92 187 8.5E-18 T 11-10-2018 IPR006665 OmpA-like domain AL543_17370 996e935539f9d00f2617c33f98a90b1d 212 SUPERFAMILY SSF103647 28 79 2.09E-9 T 11-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 AL543_17370 996e935539f9d00f2617c33f98a90b1d 212 SUPERFAMILY SSF103088 65 192 1.11E-30 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL543_17370 996e935539f9d00f2617c33f98a90b1d 212 Gene3D G3DSA:3.30.1330.60 65 197 3.9E-29 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL543_04305 885cb0ec71babe47044922a10cbd1208 288 Pfam PF00975 Thioesterase domain 20 260 8.6E-36 T 11-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 AL543_04305 885cb0ec71babe47044922a10cbd1208 288 SUPERFAMILY SSF53474 9 262 7.72E-31 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL543_04305 885cb0ec71babe47044922a10cbd1208 288 Gene3D G3DSA:3.40.50.1820 20 268 8.3E-36 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL543_06265 9ea495a434a1606c079603d211d58337 357 Gene3D G3DSA:3.30.1490.100 241 354 2.3E-25 T 11-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AL543_06265 9ea495a434a1606c079603d211d58337 357 Pfam PF11799 impB/mucB/samB family C-terminal domain 240 340 6.2E-5 T 11-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AL543_06265 9ea495a434a1606c079603d211d58337 357 Pfam PF00817 impB/mucB/samB family 11 158 1.0E-49 T 11-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AL543_06265 9ea495a434a1606c079603d211d58337 357 Hamap MF_01113 DNA polymerase IV [dinB]. 5 353 36.777 T 11-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 AL543_06265 9ea495a434a1606c079603d211d58337 357 SUPERFAMILY SSF56672 3 238 3.91E-91 T 11-10-2018 AL543_06265 9ea495a434a1606c079603d211d58337 357 Pfam PF11798 IMS family HHH motif 171 201 2.1E-5 T 11-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 AL543_06265 9ea495a434a1606c079603d211d58337 357 Gene3D G3DSA:3.30.70.270 8 168 1.1E-65 T 11-10-2018 AL543_06265 9ea495a434a1606c079603d211d58337 357 SUPERFAMILY SSF100879 245 353 3.53E-24 T 11-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AL543_06265 9ea495a434a1606c079603d211d58337 357 Gene3D G3DSA:1.10.150.20 170 232 2.1E-12 T 11-10-2018 AL543_06265 9ea495a434a1606c079603d211d58337 357 Gene3D G3DSA:2.30.40.20 25 77 1.1E-65 T 11-10-2018 AL543_07475 72f1f42ed04e5caaf00a67bf23f4c823 267 SMART SM00382 31 227 2.9E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_07475 72f1f42ed04e5caaf00a67bf23f4c823 267 Pfam PF00005 ABC transporter 23 170 4.3E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_07475 72f1f42ed04e5caaf00a67bf23f4c823 267 SUPERFAMILY SSF52540 6 240 3.15E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_07475 72f1f42ed04e5caaf00a67bf23f4c823 267 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_07475 72f1f42ed04e5caaf00a67bf23f4c823 267 Gene3D G3DSA:3.40.50.300 4 253 8.9E-65 T 11-10-2018 AL543_04185 444e42cb8dc48d8184d71717c1161b48 530 SUPERFAMILY SSF52540 5 256 1.67E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_04185 444e42cb8dc48d8184d71717c1161b48 530 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 262 4.3E-5 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL543_04185 444e42cb8dc48d8184d71717c1161b48 530 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 504 526 6.7E-5 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL543_04185 444e42cb8dc48d8184d71717c1161b48 530 Pfam PF00005 ABC transporter 303 453 9.6E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_04185 444e42cb8dc48d8184d71717c1161b48 530 Gene3D G3DSA:3.40.50.300 3 272 1.3E-81 T 11-10-2018 AL543_04185 444e42cb8dc48d8184d71717c1161b48 530 Gene3D G3DSA:3.40.50.300 273 528 9.1E-82 T 11-10-2018 AL543_04185 444e42cb8dc48d8184d71717c1161b48 530 SUPERFAMILY SSF52540 276 524 6.35E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_04185 444e42cb8dc48d8184d71717c1161b48 530 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_04185 444e42cb8dc48d8184d71717c1161b48 530 ProSitePatterns PS00211 ABC transporters family signature. 425 439 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_04185 444e42cb8dc48d8184d71717c1161b48 530 SMART SM00382 311 502 1.3E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_04185 444e42cb8dc48d8184d71717c1161b48 530 SMART SM00382 34 234 4.9E-19 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_04185 444e42cb8dc48d8184d71717c1161b48 530 Pfam PF00005 ABC transporter 26 184 4.1E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_04415 70e5e5c12292b60f3e521b44aecd1aca 499 Gene3D G3DSA:3.30.565.10 356 491 3.8E-17 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_04415 70e5e5c12292b60f3e521b44aecd1aca 499 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 401 492 6.9E-8 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_04415 70e5e5c12292b60f3e521b44aecd1aca 499 SMART SM00388 291 358 2.0E-4 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_04415 70e5e5c12292b60f3e521b44aecd1aca 499 SUPERFAMILY SSF55874 365 494 1.81E-17 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_04415 70e5e5c12292b60f3e521b44aecd1aca 499 SMART SM00387 396 494 2.7E-13 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_04415 70e5e5c12292b60f3e521b44aecd1aca 499 Gene3D G3DSA:1.10.287.130 298 355 3.8E-17 T 11-10-2018 AL543_04415 70e5e5c12292b60f3e521b44aecd1aca 499 SUPERFAMILY SSF47384 286 357 6.47E-7 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL543_04415 70e5e5c12292b60f3e521b44aecd1aca 499 Pfam PF00512 His Kinase A (phospho-acceptor) domain 296 347 1.1E-6 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_04415 70e5e5c12292b60f3e521b44aecd1aca 499 Pfam PF11884 Domain of unknown function (DUF3404) 35 290 2.7E-106 T 11-10-2018 IPR021821 Protein of unknown function DUF3404 AL543_04235 aac459c77f4b4bff7002c443408d90fa 75 Pfam PF11869 Protein of unknown function (DUF3389) 1 74 1.7E-31 T 11-10-2018 IPR021811 Protein of unknown function DUF3389 AL543_11720 e01e7b6432305a58bd66150f7d77ee71 270 PRINTS PR00412 Epoxide hydrolase signature 104 117 5.7E-9 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL543_11720 e01e7b6432305a58bd66150f7d77ee71 270 PRINTS PR00412 Epoxide hydrolase signature 45 60 5.7E-9 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL543_11720 e01e7b6432305a58bd66150f7d77ee71 270 PRINTS PR00412 Epoxide hydrolase signature 243 265 5.7E-9 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL543_11720 e01e7b6432305a58bd66150f7d77ee71 270 Pfam PF12697 Alpha/beta hydrolase family 23 258 1.3E-16 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AL543_11720 e01e7b6432305a58bd66150f7d77ee71 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 45 60 3.4E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AL543_11720 e01e7b6432305a58bd66150f7d77ee71 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 104 117 3.4E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AL543_11720 e01e7b6432305a58bd66150f7d77ee71 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 90 103 3.4E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AL543_11720 e01e7b6432305a58bd66150f7d77ee71 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 212 226 3.4E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AL543_11720 e01e7b6432305a58bd66150f7d77ee71 270 SUPERFAMILY SSF53474 4 266 1.25E-58 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL543_11720 e01e7b6432305a58bd66150f7d77ee71 270 Gene3D G3DSA:3.40.50.1820 1 269 1.0E-53 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL543_13235 f8ead9ccc0aeb392f0a9df87a66e506a 566 SUPERFAMILY SSF55785 218 331 2.86E-8 T 11-10-2018 IPR035965 PAS domain superfamily AL543_13235 f8ead9ccc0aeb392f0a9df87a66e506a 566 SUPERFAMILY SSF55874 417 547 3.67E-26 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_13235 f8ead9ccc0aeb392f0a9df87a66e506a 566 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 441 548 1.6E-15 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_13235 f8ead9ccc0aeb392f0a9df87a66e506a 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 510 528 8.8E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_13235 f8ead9ccc0aeb392f0a9df87a66e506a 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 494 8.8E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_13235 f8ead9ccc0aeb392f0a9df87a66e506a 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 534 547 8.8E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_13235 f8ead9ccc0aeb392f0a9df87a66e506a 566 Gene3D G3DSA:3.30.450.20 211 332 1.3E-16 T 11-10-2018 AL543_13235 f8ead9ccc0aeb392f0a9df87a66e506a 566 Gene3D G3DSA:3.30.450.20 42 175 1.2E-38 T 11-10-2018 AL543_13235 f8ead9ccc0aeb392f0a9df87a66e506a 566 SMART SM00091 224 292 6.1E-4 T 11-10-2018 IPR000014 PAS domain AL543_13235 f8ead9ccc0aeb392f0a9df87a66e506a 566 Gene3D G3DSA:3.30.565.10 385 548 3.4E-25 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_13235 f8ead9ccc0aeb392f0a9df87a66e506a 566 SUPERFAMILY SSF103190 48 178 1.88E-33 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily AL543_13235 f8ead9ccc0aeb392f0a9df87a66e506a 566 Pfam PF17203 Single cache domain 3 50 176 6.8E-21 T 11-10-2018 IPR033463 Single cache domain 3 AL543_13235 f8ead9ccc0aeb392f0a9df87a66e506a 566 SMART SM00387 439 550 7.3E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_13235 f8ead9ccc0aeb392f0a9df87a66e506a 566 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 342 390 7.9E-7 T 11-10-2018 IPR039506 SpoOB, alpha-helical domain AL543_07545 84ed1a203adc1205271a73bb965cf582 447 Gene3D G3DSA:3.30.2290.10 7 233 1.9E-83 T 11-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal AL543_07545 84ed1a203adc1205271a73bb965cf582 447 SUPERFAMILY SSF111283 12 447 7.46E-126 T 11-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 AL543_07545 84ed1a203adc1205271a73bb965cf582 447 Pfam PF01523 Putative modulator of DNA gyrase 32 324 1.7E-58 T 11-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AL543_04360 71a694d65a953ff229029ae59eb6d456 380 TIGRFAM TIGR01629 rep_II_X: phage/plasmid replication protein, gene II/X family 62 367 6.0E-11 T 11-10-2018 IPR006516 Replication-associated protein G2P GO:0006260 AL543_04360 71a694d65a953ff229029ae59eb6d456 380 Pfam PF05144 Phage replication protein CRI 61 244 1.7E-8 T 11-10-2018 IPR022686 Replication-associated protein G2P, N-terminal GO:0006260 AL543_04360 71a694d65a953ff229029ae59eb6d456 380 Pfam PF05155 Phage X family 282 368 5.4E-27 T 11-10-2018 IPR022688 Replication-associated protein G2P, C-terminal GO:0006260 AL543_04385 71a694d65a953ff229029ae59eb6d456 380 TIGRFAM TIGR01629 rep_II_X: phage/plasmid replication protein, gene II/X family 62 367 6.0E-11 T 11-10-2018 IPR006516 Replication-associated protein G2P GO:0006260 AL543_04385 71a694d65a953ff229029ae59eb6d456 380 Pfam PF05144 Phage replication protein CRI 61 244 1.7E-8 T 11-10-2018 IPR022686 Replication-associated protein G2P, N-terminal GO:0006260 AL543_04385 71a694d65a953ff229029ae59eb6d456 380 Pfam PF05155 Phage X family 282 368 5.4E-27 T 11-10-2018 IPR022688 Replication-associated protein G2P, C-terminal GO:0006260 AL543_13320 8d444cddb07ad598e0bc54ebabefc41d 347 SUPERFAMILY SSF53098 221 316 2.58E-7 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_13320 8d444cddb07ad598e0bc54ebabefc41d 347 Gene3D G3DSA:3.30.420.470 138 344 5.0E-12 T 11-10-2018 AL543_13320 8d444cddb07ad598e0bc54ebabefc41d 347 Pfam PF13384 Homeodomain-like domain 28 67 4.3E-7 T 11-10-2018 AL543_13320 8d444cddb07ad598e0bc54ebabefc41d 347 Pfam PF13592 Winged helix-turn helix 99 155 3.7E-18 T 11-10-2018 IPR025959 Winged helix-turn helix domain AL543_13320 8d444cddb07ad598e0bc54ebabefc41d 347 SUPERFAMILY SSF46689 16 131 8.96E-24 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_13320 8d444cddb07ad598e0bc54ebabefc41d 347 Pfam PF13358 DDE superfamily endonuclease 169 312 3.3E-34 T 11-10-2018 IPR038717 Tc1-like transposase, DDE domain AL543_00645 c1218a78ab48effec0b267e843213728 81 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 1 80 4.9E-29 T 11-10-2018 IPR009778 Modulator of Rho-dependent transcription termination AL543_00645 c1218a78ab48effec0b267e843213728 81 Gene3D G3DSA:2.30.30.400 2 80 3.4E-15 T 11-10-2018 IPR038626 Rof-like superfamily AL543_00645 c1218a78ab48effec0b267e843213728 81 SUPERFAMILY SSF101744 1 80 2.51E-22 T 11-10-2018 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 AL543_04040 5bfd64c86d1452c8bf4f40fda19f6514 122 Gene3D G3DSA:3.10.180.10 8 122 2.2E-17 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL543_04040 5bfd64c86d1452c8bf4f40fda19f6514 122 SUPERFAMILY SSF54593 12 120 3.61E-21 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL543_18190 6bcd134d1dac6fdb97a7cf7e35f58e19 146 Gene3D G3DSA:3.40.930.10 1 145 1.1E-29 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AL543_18190 6bcd134d1dac6fdb97a7cf7e35f58e19 146 SUPERFAMILY SSF55804 1 144 4.06E-29 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AL543_18190 6bcd134d1dac6fdb97a7cf7e35f58e19 146 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 144 1.2E-29 T 11-10-2018 IPR002178 PTS EIIA type-2 domain AL543_14770 62d229dcbfbf6bcddf8e93ddda00e6c2 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 2.2E-41 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL543_14770 62d229dcbfbf6bcddf8e93ddda00e6c2 306 SUPERFAMILY SSF161098 88 291 1.53E-20 T 11-10-2018 IPR035906 MetI-like superfamily AL543_14770 62d229dcbfbf6bcddf8e93ddda00e6c2 306 Gene3D G3DSA:1.10.3720.10 84 300 3.8E-22 T 11-10-2018 IPR035906 MetI-like superfamily AL543_01220 3c14ccf780d5c7e6d3bb881ffd3213ed 125 Pfam PF00072 Response regulator receiver domain 10 121 1.0E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_01220 3c14ccf780d5c7e6d3bb881ffd3213ed 125 SMART SM00448 8 121 5.5E-39 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_01220 3c14ccf780d5c7e6d3bb881ffd3213ed 125 SUPERFAMILY SSF52172 7 125 2.99E-38 T 11-10-2018 IPR011006 CheY-like superfamily AL543_01220 3c14ccf780d5c7e6d3bb881ffd3213ed 125 Gene3D G3DSA:3.40.50.2300 3 125 2.1E-38 T 11-10-2018 AL543_20460 01169776bb2c14f2e99e774f14a167e0 212 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 31.264 T 11-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 AL543_20460 01169776bb2c14f2e99e774f14a167e0 212 Gene3D G3DSA:3.40.50.170 3 212 2.3E-85 T 11-10-2018 AL543_20460 01169776bb2c14f2e99e774f14a167e0 212 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 3 192 1.4E-77 T 11-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 AL543_20460 01169776bb2c14f2e99e774f14a167e0 212 Pfam PF00551 Formyl transferase 3 182 9.8E-64 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL543_20460 01169776bb2c14f2e99e774f14a167e0 212 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 11-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL543_20460 01169776bb2c14f2e99e774f14a167e0 212 SUPERFAMILY SSF53328 4 198 2.35E-64 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL543_19605 0dfdb3e76943aafc603c8733162abcb3 208 SMART SM00382 26 208 6.0E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_19605 0dfdb3e76943aafc603c8733162abcb3 208 Gene3D G3DSA:3.40.50.300 1 202 4.3E-42 T 11-10-2018 AL543_19605 0dfdb3e76943aafc603c8733162abcb3 208 Pfam PF00005 ABC transporter 18 158 4.3E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_19605 0dfdb3e76943aafc603c8733162abcb3 208 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 199 6.5E-79 T 11-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 AL543_19605 0dfdb3e76943aafc603c8733162abcb3 208 SUPERFAMILY SSF52540 2 195 4.53E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_19605 0dfdb3e76943aafc603c8733162abcb3 208 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_01950 c40e33dd76b88aeac19fdc850d4f04f1 468 Pfam PF00939 Sodium:sulfate symporter transmembrane region 5 468 1.4E-137 T 11-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AL543_01950 c40e33dd76b88aeac19fdc850d4f04f1 468 PIRSF PIRSF002457 3 468 8.5E-135 T 11-10-2018 IPR030676 Citrate carrier CitT-related AL543_01950 c40e33dd76b88aeac19fdc850d4f04f1 468 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 23 462 9.6E-114 T 11-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AL543_15345 b5201690a78d754012a9342e45dc7b23 106 Hamap MF_00680 UPF0263 protein YciU [yciU]. 1 106 35.211 T 11-10-2018 IPR007376 dsDNA mimic, putative AL543_15345 b5201690a78d754012a9342e45dc7b23 106 Pfam PF04269 Protein of unknown function, DUF440 6 105 1.4E-43 T 11-10-2018 IPR007376 dsDNA mimic, putative AL543_15345 b5201690a78d754012a9342e45dc7b23 106 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 8 104 1.0E-40 T 11-10-2018 IPR007376 dsDNA mimic, putative AL543_15345 b5201690a78d754012a9342e45dc7b23 106 SUPERFAMILY SSF102816 3 105 5.89E-46 T 11-10-2018 IPR036763 Putative dsDNA mimic superfamily AL543_15345 b5201690a78d754012a9342e45dc7b23 106 PIRSF PIRSF004916 1 105 4.6E-52 T 11-10-2018 IPR007376 dsDNA mimic, putative AL543_15345 b5201690a78d754012a9342e45dc7b23 106 Gene3D G3DSA:3.10.450.140 5 105 1.1E-39 T 11-10-2018 IPR036763 Putative dsDNA mimic superfamily AL543_14680 fa30515e93258a6967a874f3318a0406 1071 SUPERFAMILY SSF54556 662 785 1.17E-9 T 11-10-2018 IPR029070 Chitinase insertion domain superfamily AL543_14680 fa30515e93258a6967a874f3318a0406 1071 Gene3D G3DSA:2.10.10.20 1018 1070 2.9E-12 T 11-10-2018 AL543_14680 fa30515e93258a6967a874f3318a0406 1071 Gene3D G3DSA:3.20.20.80 790 816 3.2E-13 T 11-10-2018 AL543_14680 fa30515e93258a6967a874f3318a0406 1071 Pfam PF14600 Cellulose-binding domain 1033 1068 4.2E-8 T 11-10-2018 IPR032798 Endoglucanase Z, cellulose-binding domain KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AL543_14680 fa30515e93258a6967a874f3318a0406 1071 SUPERFAMILY SSF51055 1018 1070 1.47E-12 T 11-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL543_14680 fa30515e93258a6967a874f3318a0406 1071 Pfam PF06483 Chitinase C 824 991 5.3E-60 T 11-10-2018 IPR009470 Chitinase, C-terminal KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AL543_14680 fa30515e93258a6967a874f3318a0406 1071 ProSitePatterns PS01095 Chitinases family 18 active site. 504 512 - T 11-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AL543_14680 fa30515e93258a6967a874f3318a0406 1071 Gene3D G3DSA:3.20.20.80 351 685 9.5E-82 T 11-10-2018 AL543_14680 fa30515e93258a6967a874f3318a0406 1071 SMART SM00495 1026 1068 2.4E-5 T 11-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL543_14680 fa30515e93258a6967a874f3318a0406 1071 Pfam PF00704 Glycosyl hydrolases family 18 369 815 1.0E-79 T 11-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 AL543_14680 fa30515e93258a6967a874f3318a0406 1071 Gene3D G3DSA:2.60.40.10 150 240 1.1E-16 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL543_14680 fa30515e93258a6967a874f3318a0406 1071 Gene3D G3DSA:3.10.50.10 755 789 3.2E-13 T 11-10-2018 IPR029070 Chitinase insertion domain superfamily AL543_14680 fa30515e93258a6967a874f3318a0406 1071 SUPERFAMILY SSF51445 361 818 1.2E-76 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AL543_14680 fa30515e93258a6967a874f3318a0406 1071 Gene3D G3DSA:2.60.40.10 249 343 7.5E-23 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL543_14680 fa30515e93258a6967a874f3318a0406 1071 SMART SM00636 368 815 6.4E-116 T 11-10-2018 IPR011583 Chitinase II GO:0008061 AL543_12220 0ae08da39ca07e1d148a82c1f41328f7 340 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 340 46.404 T 11-10-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 AL543_12220 0ae08da39ca07e1d148a82c1f41328f7 340 Gene3D G3DSA:3.40.50.150 1 158 3.0E-51 T 11-10-2018 AL543_12220 0ae08da39ca07e1d148a82c1f41328f7 340 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 269 275 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AL543_12220 0ae08da39ca07e1d148a82c1f41328f7 340 Pfam PF08468 Methyltransferase small domain N-terminal 9 163 3.0E-57 T 11-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 AL543_12220 0ae08da39ca07e1d148a82c1f41328f7 340 Gene3D G3DSA:3.40.50.150 159 340 1.5E-42 T 11-10-2018 AL543_12220 0ae08da39ca07e1d148a82c1f41328f7 340 SUPERFAMILY SSF53335 157 320 1.92E-27 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL543_12220 0ae08da39ca07e1d148a82c1f41328f7 340 Pfam PF05175 Methyltransferase small domain 171 336 6.8E-59 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 AL543_09270 11eb6cbc82b4eddb51d815e25c0dbc19 646 Gene3D G3DSA:3.20.20.540 214 527 8.2E-156 T 11-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AL543_09270 11eb6cbc82b4eddb51d815e25c0dbc19 646 Pfam PF13667 ThiC-associated domain 22 103 2.0E-32 T 11-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AL543_09270 11eb6cbc82b4eddb51d815e25c0dbc19 646 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 143 596 99.85 T 11-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AL543_09270 11eb6cbc82b4eddb51d815e25c0dbc19 646 Pfam PF01964 Radical SAM ThiC family 144 592 9.1E-201 T 11-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AL543_09270 11eb6cbc82b4eddb51d815e25c0dbc19 646 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 143 595 5.1E-220 T 11-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AL543_12005 daa068211de4c8831efb331b17cdf353 421 Gene3D G3DSA:1.20.810.10 1 421 1.4E-149 T 11-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 AL543_12005 daa068211de4c8831efb331b17cdf353 421 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 295 396 1.2E-40 T 11-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 AL543_12005 daa068211de4c8831efb331b17cdf353 421 SUPERFAMILY SSF81342 6 296 3.77E-92 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AL543_12005 daa068211de4c8831efb331b17cdf353 421 Pfam PF00033 Cytochrome b/b6/petB 23 211 1.8E-65 T 11-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 AL543_12005 daa068211de4c8831efb331b17cdf353 421 PIRSF PIRSF038885 1 421 1.6E-152 T 11-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 AL543_12005 daa068211de4c8831efb331b17cdf353 421 SUPERFAMILY SSF81648 297 411 2.62E-33 T 11-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 AL543_06220 ee9a5413689872a531e22f4b14002cb2 154 SUPERFAMILY SSF53271 5 147 4.26E-30 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AL543_06220 ee9a5413689872a531e22f4b14002cb2 154 Pfam PF00156 Phosphoribosyl transferase domain 27 142 1.2E-15 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AL543_06220 ee9a5413689872a531e22f4b14002cb2 154 Gene3D G3DSA:3.40.50.2020 1 152 2.3E-43 T 11-10-2018 AL543_06220 ee9a5413689872a531e22f4b14002cb2 154 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 153 40.038 T 11-10-2018 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22 AL543_02985 6146cc6988a3b42f2087811d8d568709 318 Gene3D G3DSA:3.40.50.2300 36 293 5.5E-91 T 11-10-2018 AL543_02985 6146cc6988a3b42f2087811d8d568709 318 Gene3D G3DSA:3.40.50.2300 130 301 5.5E-91 T 11-10-2018 AL543_02985 6146cc6988a3b42f2087811d8d568709 318 Pfam PF13407 Periplasmic binding protein domain 28 285 1.7E-62 T 11-10-2018 IPR025997 Periplasmic binding protein AL543_02985 6146cc6988a3b42f2087811d8d568709 318 SUPERFAMILY SSF53822 28 312 3.53E-72 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AL543_05805 378ea99a3b09df582a6e1439221776be 309 PIRSF PIRSF036979 11 305 2.0E-97 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 AL543_05805 378ea99a3b09df582a6e1439221776be 309 TIGRFAM TIGR01230 agmatinase: agmatinase 25 299 7.6E-93 T 11-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 AL543_05805 378ea99a3b09df582a6e1439221776be 309 SUPERFAMILY SSF52768 12 303 1.98E-95 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily AL543_05805 378ea99a3b09df582a6e1439221776be 309 ProSitePatterns PS01053 Arginase family signature. 229 250 - T 11-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 AL543_05805 378ea99a3b09df582a6e1439221776be 309 Pfam PF00491 Arginase family 33 297 1.5E-89 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 AL543_05805 378ea99a3b09df582a6e1439221776be 309 Gene3D G3DSA:3.40.800.10 1 309 4.7E-106 T 11-10-2018 AL543_03060 ffcffbdcc0a59f91d564cf72400b710d 329 Pfam PF00089 Trypsin 24 267 5.5E-34 T 11-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AL543_03060 ffcffbdcc0a59f91d564cf72400b710d 329 SUPERFAMILY SSF50494 3 272 6.85E-53 T 11-10-2018 IPR009003 Peptidase S1, PA clan AL543_03060 ffcffbdcc0a59f91d564cf72400b710d 329 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 215 226 - T 11-10-2018 IPR033116 Serine proteases, trypsin family, serine active site AL543_03060 ffcffbdcc0a59f91d564cf72400b710d 329 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 67 72 - T 11-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 AL543_03060 ffcffbdcc0a59f91d564cf72400b710d 329 SMART SM00020 23 267 9.5E-32 T 11-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AL543_03060 ffcffbdcc0a59f91d564cf72400b710d 329 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 214 226 8.7E-12 T 11-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AL543_03060 ffcffbdcc0a59f91d564cf72400b710d 329 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 57 72 8.7E-12 T 11-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AL543_03060 ffcffbdcc0a59f91d564cf72400b710d 329 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 121 135 8.7E-12 T 11-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AL543_03060 ffcffbdcc0a59f91d564cf72400b710d 329 Gene3D G3DSA:2.40.10.10 16 272 4.2E-46 T 11-10-2018 AL543_06670 799d4bc0540069e09e32076768456cc7 312 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 6 300 1.8E-143 T 11-10-2018 IPR005911 Protein YhcC-like GO:0051536 AL543_06670 799d4bc0540069e09e32076768456cc7 312 Gene3D G3DSA:3.80.30.20 41 273 5.1E-16 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AL543_06670 799d4bc0540069e09e32076768456cc7 312 SUPERFAMILY SSF102114 13 268 1.57E-47 T 11-10-2018 AL543_06670 799d4bc0540069e09e32076768456cc7 312 SMART SM00729 23 247 8.5E-43 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AL543_06670 799d4bc0540069e09e32076768456cc7 312 Pfam PF04055 Radical SAM superfamily 43 201 2.0E-17 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL543_06670 799d4bc0540069e09e32076768456cc7 312 Pfam PF16199 Radical_SAM C-terminal domain 209 282 1.5E-18 T 11-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 AL543_16265 c567fb5da75c4ad69a4dd9462862ba3b 160 Pfam PF13505 Outer membrane protein beta-barrel domain 6 159 1.3E-15 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel AL543_16265 c567fb5da75c4ad69a4dd9462862ba3b 160 SUPERFAMILY SSF56925 17 159 4.45E-21 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AL543_16265 c567fb5da75c4ad69a4dd9462862ba3b 160 Gene3D G3DSA:2.40.160.20 18 160 1.4E-24 T 11-10-2018 AL543_07025 ce8e75edf96c191da417302a4df068ae 529 Gene3D G3DSA:3.40.50.300 26 184 7.0E-15 T 11-10-2018 AL543_07025 ce8e75edf96c191da417302a4df068ae 529 Gene3D G3DSA:3.90.70.10 335 451 5.5E-36 T 11-10-2018 AL543_07025 ce8e75edf96c191da417302a4df068ae 529 SUPERFAMILY SSF47090 449 521 3.14E-12 T 11-10-2018 IPR036365 PGBD-like superfamily AL543_07025 ce8e75edf96c191da417302a4df068ae 529 Pfam PF13401 AAA domain 42 171 2.1E-21 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_07025 ce8e75edf96c191da417302a4df068ae 529 Pfam PF01471 Putative peptidoglycan binding domain 458 514 1.4E-9 T 11-10-2018 IPR002477 Peptidoglycan binding-like AL543_07025 ce8e75edf96c191da417302a4df068ae 529 Gene3D G3DSA:1.10.101.10 452 518 7.4E-21 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 AL543_07025 ce8e75edf96c191da417302a4df068ae 529 SUPERFAMILY SSF52540 5 264 6.36E-34 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_07025 ce8e75edf96c191da417302a4df068ae 529 SMART SM00382 42 194 7.2E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_14775 86f6810466ab79675ed519bfe5a893c4 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 298 1.9E-26 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL543_14775 86f6810466ab79675ed519bfe5a893c4 300 SUPERFAMILY SSF161098 96 281 3.01E-26 T 11-10-2018 IPR035906 MetI-like superfamily AL543_14775 86f6810466ab79675ed519bfe5a893c4 300 Gene3D G3DSA:1.10.3720.10 94 296 2.6E-19 T 11-10-2018 IPR035906 MetI-like superfamily AL543_14775 86f6810466ab79675ed519bfe5a893c4 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 76 1.2E-14 T 11-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AL543_18430 37c735e18fe7e624da44117a26bbfd49 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 29 217 2.0E-21 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL543_18430 37c735e18fe7e624da44117a26bbfd49 225 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 112 5.8E-24 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 AL543_18430 37c735e18fe7e624da44117a26bbfd49 225 SUPERFAMILY SSF161098 11 203 9.55E-42 T 11-10-2018 IPR035906 MetI-like superfamily AL543_18430 37c735e18fe7e624da44117a26bbfd49 225 Gene3D G3DSA:1.10.3720.10 1 218 1.2E-50 T 11-10-2018 IPR035906 MetI-like superfamily AL543_14755 4007fcd36bba5caf41ea464667216528 535 Gene3D G3DSA:1.10.287.130 258 375 2.8E-15 T 11-10-2018 AL543_14755 4007fcd36bba5caf41ea464667216528 535 SUPERFAMILY SSF158472 176 223 6.93E-6 T 11-10-2018 AL543_14755 4007fcd36bba5caf41ea464667216528 535 SUPERFAMILY SSF55874 394 532 1.96E-28 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_14755 4007fcd36bba5caf41ea464667216528 535 SMART SM00304 174 226 1.5E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_14755 4007fcd36bba5caf41ea464667216528 535 SMART SM00387 420 531 3.9E-15 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_14755 4007fcd36bba5caf41ea464667216528 535 Pfam PF00672 HAMP domain 176 223 1.4E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_14755 4007fcd36bba5caf41ea464667216528 535 Gene3D G3DSA:3.30.565.10 392 533 3.7E-27 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_14755 4007fcd36bba5caf41ea464667216528 535 Gene3D G3DSA:1.20.1480.50 141 232 4.9E-9 T 11-10-2018 AL543_14755 4007fcd36bba5caf41ea464667216528 535 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 427 530 7.8E-14 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_14755 4007fcd36bba5caf41ea464667216528 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 515 528 3.2E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_14755 4007fcd36bba5caf41ea464667216528 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 488 3.2E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_14755 4007fcd36bba5caf41ea464667216528 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 509 3.2E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_14755 4007fcd36bba5caf41ea464667216528 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 460 474 3.2E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_11765 72e2e6858486c3e7a202db247973ea0e 361 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 187 336 2.6E-19 T 11-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL543_11765 72e2e6858486c3e7a202db247973ea0e 361 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 9 171 2.2E-40 T 11-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL543_11765 72e2e6858486c3e7a202db247973ea0e 361 Gene3D G3DSA:3.30.2350.20 18 336 5.3E-103 T 11-10-2018 AL543_11765 72e2e6858486c3e7a202db247973ea0e 361 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 6 341 28.386 T 11-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL543_11765 72e2e6858486c3e7a202db247973ea0e 361 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 8 227 1.0E-51 T 11-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL543_11765 72e2e6858486c3e7a202db247973ea0e 361 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 78 91 - T 11-10-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 AL543_11765 72e2e6858486c3e7a202db247973ea0e 361 Gene3D G3DSA:3.30.2340.10 170 301 5.3E-103 T 11-10-2018 AL543_11765 72e2e6858486c3e7a202db247973ea0e 361 SUPERFAMILY SSF55120 6 337 1.02E-95 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL543_03835 0dcb507ad8b13e4070e103708742a5a7 145 SUPERFAMILY SSF158675 1 145 8.89E-51 T 11-10-2018 IPR023132 Sama2622-like superfamily AL543_03835 0dcb507ad8b13e4070e103708742a5a7 145 Gene3D G3DSA:1.10.3440.10 12 144 1.3E-5 T 11-10-2018 IPR023132 Sama2622-like superfamily AL543_03835 0dcb507ad8b13e4070e103708742a5a7 145 Pfam PF11269 Protein of unknown function (DUF3069) 24 143 3.2E-51 T 11-10-2018 IPR021422 Protein of unknown function DUF3069 AL543_01265 95663687781b7054db70a28b453b3566 218 SUPERFAMILY SSF52172 1 131 1.02E-35 T 11-10-2018 IPR011006 CheY-like superfamily AL543_01265 95663687781b7054db70a28b453b3566 218 SMART SM00862 145 216 1.1E-22 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL543_01265 95663687781b7054db70a28b453b3566 218 Gene3D G3DSA:3.40.50.2300 1 121 1.9E-36 T 11-10-2018 AL543_01265 95663687781b7054db70a28b453b3566 218 Pfam PF00072 Response regulator receiver domain 4 112 6.9E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_01265 95663687781b7054db70a28b453b3566 218 SUPERFAMILY SSF46894 118 216 6.52E-25 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL543_01265 95663687781b7054db70a28b453b3566 218 Gene3D G3DSA:1.10.10.10 122 218 1.8E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_01265 95663687781b7054db70a28b453b3566 218 SMART SM00448 1 112 7.5E-36 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_01265 95663687781b7054db70a28b453b3566 218 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 216 3.8E-21 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL543_02940 68aa5bbd8f322c5462b51743596c862a 355 SUPERFAMILY SSF56281 35 291 8.56E-27 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AL543_02940 68aa5bbd8f322c5462b51743596c862a 355 Pfam PF13483 Beta-lactamase superfamily domain 42 282 7.0E-13 T 11-10-2018 AL543_02940 68aa5bbd8f322c5462b51743596c862a 355 Gene3D G3DSA:3.60.15.10 3 355 8.8E-112 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AL543_19705 74e5e457d69c8f2f9450389237ad208b 76 Pfam PF04023 FeoA domain 1 74 1.1E-17 T 11-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 AL543_19705 74e5e457d69c8f2f9450389237ad208b 76 SMART SM00899 1 74 3.8E-22 T 11-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 AL543_19705 74e5e457d69c8f2f9450389237ad208b 76 Gene3D G3DSA:2.30.30.90 1 76 3.3E-23 T 11-10-2018 IPR038157 Ferrous iron transporter, core domain AL543_19705 74e5e457d69c8f2f9450389237ad208b 76 SUPERFAMILY SSF50037 4 74 3.43E-19 T 11-10-2018 IPR008988 Transcriptional repressor, C-terminal AL543_01870 49e53a14a36d9a6f8b7e0509296d7bf2 544 SMART SM00283 281 542 5.5E-77 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_01870 49e53a14a36d9a6f8b7e0509296d7bf2 544 SUPERFAMILY SSF58104 240 543 3.27E-74 T 11-10-2018 AL543_01870 49e53a14a36d9a6f8b7e0509296d7bf2 544 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 408 437 8.5E-25 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL543_01870 49e53a14a36d9a6f8b7e0509296d7bf2 544 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 7 32 8.5E-25 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL543_01870 49e53a14a36d9a6f8b7e0509296d7bf2 544 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 302 331 8.5E-25 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL543_01870 49e53a14a36d9a6f8b7e0509296d7bf2 544 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 379 406 8.5E-25 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL543_01870 49e53a14a36d9a6f8b7e0509296d7bf2 544 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 325 508 4.0E-40 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_01870 49e53a14a36d9a6f8b7e0509296d7bf2 544 Pfam PF00672 HAMP domain 216 253 8.8E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_01870 49e53a14a36d9a6f8b7e0509296d7bf2 544 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 172 2.7E-17 T 11-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain AL543_01870 49e53a14a36d9a6f8b7e0509296d7bf2 544 SMART SM00304 212 266 1.9E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_01870 49e53a14a36d9a6f8b7e0509296d7bf2 544 Gene3D G3DSA:1.10.287.950 212 544 4.7E-77 T 11-10-2018 AL543_10385 deebd403ac5f4d1abae68fa8bc2890f7 352 Pfam PF01595 Domain of unknown function DUF21 9 176 1.5E-27 T 11-10-2018 IPR002550 CNNM, transmembrane domain AL543_10385 deebd403ac5f4d1abae68fa8bc2890f7 352 Gene3D G3DSA:3.10.580.10 176 322 3.7E-36 T 11-10-2018 AL543_10385 deebd403ac5f4d1abae68fa8bc2890f7 352 SUPERFAMILY SSF54631 180 315 1.71E-25 T 11-10-2018 AL543_10385 deebd403ac5f4d1abae68fa8bc2890f7 352 Pfam PF00571 CBS domain 260 313 8.7E-6 T 11-10-2018 IPR000644 CBS domain AL543_04330 637436d1f9d6a318d1cbc892ae205fcd 646 SUPERFAMILY SSF56935 15 646 3.89E-103 T 11-10-2018 AL543_04330 637436d1f9d6a318d1cbc892ae205fcd 646 Pfam PF00593 TonB dependent receptor 213 643 6.3E-46 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AL543_04330 637436d1f9d6a318d1cbc892ae205fcd 646 Gene3D G3DSA:2.40.170.20 24 646 3.9E-144 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AL543_04330 637436d1f9d6a318d1cbc892ae205fcd 646 Pfam PF07715 TonB-dependent Receptor Plug Domain 33 135 8.3E-15 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AL543_17560 492006883b28ed3bb29a5b4a098a0e5a 553 SUPERFAMILY SSF48452 170 294 6.7E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_17560 492006883b28ed3bb29a5b4a098a0e5a 553 Gene3D G3DSA:1.25.40.10 140 309 3.2E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_17560 492006883b28ed3bb29a5b4a098a0e5a 553 SMART SM00448 9 127 3.1E-14 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_17560 492006883b28ed3bb29a5b4a098a0e5a 553 PIRSF PIRSF011521 2 547 1.6E-256 T 11-10-2018 IPR014460 Signal transduction response regulator, predicted, VieB AL543_17560 492006883b28ed3bb29a5b4a098a0e5a 553 Pfam PF00072 Response regulator receiver domain 11 127 4.5E-12 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_17560 492006883b28ed3bb29a5b4a098a0e5a 553 SUPERFAMILY SSF52172 7 142 6.55E-20 T 11-10-2018 IPR011006 CheY-like superfamily AL543_17560 492006883b28ed3bb29a5b4a098a0e5a 553 Gene3D G3DSA:3.40.50.2300 5 139 6.5E-19 T 11-10-2018 AL543_16730 c2baac3c955dbb64f85edc2a335aa704 336 SUPERFAMILY SSF51395 1 336 8.43E-106 T 11-10-2018 AL543_16730 c2baac3c955dbb64f85edc2a335aa704 336 Gene3D G3DSA:3.20.20.70 2 336 9.5E-142 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_16730 c2baac3c955dbb64f85edc2a335aa704 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 11-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 AL543_16730 c2baac3c955dbb64f85edc2a335aa704 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 336 3.2E-90 T 11-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 AL543_16730 c2baac3c955dbb64f85edc2a335aa704 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 50.977 T 11-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AL543_16730 c2baac3c955dbb64f85edc2a335aa704 336 PIRSF PIRSF000164 10 336 1.8E-102 T 11-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 AL543_16730 c2baac3c955dbb64f85edc2a335aa704 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 336 6.1E-148 T 11-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AL543_16730 c2baac3c955dbb64f85edc2a335aa704 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 11-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 AL543_05470 7b60f99968c731e7582ce8ae0c9adcdd 119 Gene3D G3DSA:3.10.180.10 1 118 1.7E-21 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL543_05470 7b60f99968c731e7582ce8ae0c9adcdd 119 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 112 5.0E-10 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL543_05470 7b60f99968c731e7582ce8ae0c9adcdd 119 SUPERFAMILY SSF54593 6 115 4.3E-23 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL543_05520 7b60f99968c731e7582ce8ae0c9adcdd 119 Gene3D G3DSA:3.10.180.10 1 118 1.7E-21 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL543_05520 7b60f99968c731e7582ce8ae0c9adcdd 119 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 112 5.0E-10 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL543_05520 7b60f99968c731e7582ce8ae0c9adcdd 119 SUPERFAMILY SSF54593 6 115 4.3E-23 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL543_17110 afc93966a3ac25e2cb008db8ab581e59 323 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 10 323 3.8E-144 T 11-10-2018 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL543_17110 afc93966a3ac25e2cb008db8ab581e59 323 Gene3D G3DSA:1.10.620.20 5 292 4.7E-109 T 11-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 AL543_17110 afc93966a3ac25e2cb008db8ab581e59 323 SUPERFAMILY SSF47240 6 323 1.38E-100 T 11-10-2018 IPR009078 Ferritin-like superfamily AL543_17110 afc93966a3ac25e2cb008db8ab581e59 323 Pfam PF00268 Ribonucleotide reductase, small chain 12 284 5.5E-84 T 11-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL543_17110 afc93966a3ac25e2cb008db8ab581e59 323 PIRSF PIRSF000355 3 320 9.6E-85 T 11-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL543_17110 afc93966a3ac25e2cb008db8ab581e59 323 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 100 116 - T 11-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL543_06125 024a21383ee21364df56505e2195a868 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.702 T 11-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 AL543_06125 024a21383ee21364df56505e2195a868 185 Pfam PF01765 Ribosome recycling factor 20 183 1.3E-63 T 11-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 AL543_06125 024a21383ee21364df56505e2195a868 185 Gene3D G3DSA:1.10.132.20 11 182 1.0E-67 T 11-10-2018 AL543_06125 024a21383ee21364df56505e2195a868 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 2.6E-76 T 11-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 AL543_06125 024a21383ee21364df56505e2195a868 185 SUPERFAMILY SSF55194 2 184 9.55E-73 T 11-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 AL543_06125 024a21383ee21364df56505e2195a868 185 Gene3D G3DSA:3.30.1360.40 31 105 1.0E-67 T 11-10-2018 AL543_11770 76c5817abd701181b5302cd78ca5b988 263 Pfam PF01975 Survival protein SurE 16 194 9.5E-62 T 11-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AL543_11770 76c5817abd701181b5302cd78ca5b988 263 SUPERFAMILY SSF64167 14 259 3.14E-86 T 11-10-2018 AL543_11770 76c5817abd701181b5302cd78ca5b988 263 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 14 262 41.613 T 11-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AL543_11770 76c5817abd701181b5302cd78ca5b988 263 Gene3D G3DSA:3.40.1210.10 3 263 3.3E-97 T 11-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AL543_11770 76c5817abd701181b5302cd78ca5b988 263 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 14 245 1.0E-73 T 11-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AL543_08770 ab7094ce86e111c52c7fd1be79fbed70 419 Gene3D G3DSA:1.10.443.10 216 394 6.0E-26 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AL543_08770 ab7094ce86e111c52c7fd1be79fbed70 419 Pfam PF13356 Arm DNA-binding domain 9 98 8.7E-14 T 11-10-2018 IPR025166 Integrase, DNA-binding domain AL543_08770 ab7094ce86e111c52c7fd1be79fbed70 419 Pfam PF00589 Phage integrase family 218 386 2.1E-22 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL543_08770 ab7094ce86e111c52c7fd1be79fbed70 419 SUPERFAMILY SSF56349 108 391 8.24E-47 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL543_08770 ab7094ce86e111c52c7fd1be79fbed70 419 Gene3D G3DSA:1.10.150.130 101 215 4.3E-13 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AL543_08770 ab7094ce86e111c52c7fd1be79fbed70 419 Gene3D G3DSA:3.30.160.390 7 100 1.5E-15 T 11-10-2018 IPR038488 Integrase, DNA-binding domain superfamily AL543_10910 8d73d6a57916d780c20e50307cf44f8b 698 SMART SM00838 605 693 4.4E-59 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like AL543_10910 8d73d6a57916d780c20e50307cf44f8b 698 SUPERFAMILY SSF52540 6 288 1.84E-106 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_10910 8d73d6a57916d780c20e50307cf44f8b 698 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site AL543_10910 8d73d6a57916d780c20e50307cf44f8b 698 SUPERFAMILY SSF54980 608 695 5.28E-30 T 11-10-2018 IPR035647 EF-G domain III/V-like AL543_10910 8d73d6a57916d780c20e50307cf44f8b 698 SUPERFAMILY SSF54211 484 604 1.8E-46 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL543_10910 8d73d6a57916d780c20e50307cf44f8b 698 Pfam PF00679 Elongation factor G C-terminus 605 692 6.0E-31 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like AL543_10910 8d73d6a57916d780c20e50307cf44f8b 698 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 3.6E-36 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL543_10910 8d73d6a57916d780c20e50307cf44f8b 698 SMART SM00889 485 603 1.2E-73 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AL543_10910 8d73d6a57916d780c20e50307cf44f8b 698 Pfam PF03764 Elongation factor G, domain IV 484 603 8.5E-48 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AL543_10910 8d73d6a57916d780c20e50307cf44f8b 698 SUPERFAMILY SSF54980 407 485 3.24E-25 T 11-10-2018 IPR035647 EF-G domain III/V-like AL543_10910 8d73d6a57916d780c20e50307cf44f8b 698 Gene3D G3DSA:3.30.70.870 410 488 1.0E-32 T 11-10-2018 AL543_10910 8d73d6a57916d780c20e50307cf44f8b 698 Pfam PF14492 Elongation Factor G, domain II 409 483 8.5E-34 T 11-10-2018 AL543_10910 8d73d6a57916d780c20e50307cf44f8b 698 Pfam PF03144 Elongation factor Tu domain 2 329 396 5.5E-17 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AL543_10910 8d73d6a57916d780c20e50307cf44f8b 698 Gene3D G3DSA:3.40.50.300 1 298 3.9E-116 T 11-10-2018 AL543_10910 8d73d6a57916d780c20e50307cf44f8b 698 PRINTS PR00315 GTP-binding elongation factor signature 101 112 9.4E-17 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL543_10910 8d73d6a57916d780c20e50307cf44f8b 698 PRINTS PR00315 GTP-binding elongation factor signature 12 25 9.4E-17 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL543_10910 8d73d6a57916d780c20e50307cf44f8b 698 PRINTS PR00315 GTP-binding elongation factor signature 85 95 9.4E-17 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL543_10910 8d73d6a57916d780c20e50307cf44f8b 698 PRINTS PR00315 GTP-binding elongation factor signature 137 146 9.4E-17 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL543_10910 8d73d6a57916d780c20e50307cf44f8b 698 PRINTS PR00315 GTP-binding elongation factor signature 58 66 9.4E-17 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL543_10910 8d73d6a57916d780c20e50307cf44f8b 698 Gene3D G3DSA:3.30.230.10 489 693 1.5E-90 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL543_10910 8d73d6a57916d780c20e50307cf44f8b 698 Gene3D G3DSA:3.30.70.240 609 680 1.5E-90 T 11-10-2018 AL543_10910 8d73d6a57916d780c20e50307cf44f8b 698 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 697 0.0 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL543_10910 8d73d6a57916d780c20e50307cf44f8b 698 SUPERFAMILY SSF50447 271 409 4.64E-35 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AL543_10910 8d73d6a57916d780c20e50307cf44f8b 698 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 1.2E-66 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL543_10910 8d73d6a57916d780c20e50307cf44f8b 698 Gene3D G3DSA:2.40.30.10 299 405 7.7E-46 T 11-10-2018 AL543_10910 8d73d6a57916d780c20e50307cf44f8b 698 Hamap MF_00054_B Elongation factor G [fusA]. 6 697 112.716 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL543_19850 5c65fd4eddd103e43fcbeff62b4d253e 674 Gene3D G3DSA:3.30.9.10 352 576 3.7E-136 T 11-10-2018 AL543_19850 5c65fd4eddd103e43fcbeff62b4d253e 674 SUPERFAMILY SSF51905 268 664 5.61E-29 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_19850 5c65fd4eddd103e43fcbeff62b4d253e 674 Gene3D G3DSA:3.50.50.60 267 664 3.7E-136 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_19850 5c65fd4eddd103e43fcbeff62b4d253e 674 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 8 662 28.176 T 11-10-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 AL543_19850 5c65fd4eddd103e43fcbeff62b4d253e 674 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 268 667 1.6E-156 T 11-10-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 AL543_19850 5c65fd4eddd103e43fcbeff62b4d253e 674 Gene3D G3DSA:3.40.50.150 10 253 1.5E-106 T 11-10-2018 AL543_19850 5c65fd4eddd103e43fcbeff62b4d253e 674 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 119 244 3.3E-47 T 11-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 AL543_19850 5c65fd4eddd103e43fcbeff62b4d253e 674 Pfam PF01266 FAD dependent oxidoreductase 268 637 6.2E-46 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL543_14565 df054969da5bc658183ee386f0fe7798 195 SUPERFAMILY SSF52833 1 195 1.05E-34 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL543_14565 df054969da5bc658183ee386f0fe7798 195 ProSitePatterns PS00195 Glutaredoxin active site. 7 23 - T 11-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 AL543_14565 df054969da5bc658183ee386f0fe7798 195 Pfam PF01323 DSBA-like thioredoxin domain 4 193 3.4E-29 T 11-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 AL543_14565 df054969da5bc658183ee386f0fe7798 195 Gene3D G3DSA:3.40.30.10 1 195 2.8E-37 T 11-10-2018 AL543_11665 ef59253368fdb2571ebe9a945ee35bb2 470 SUPERFAMILY SSF50800 70 167 6.11E-30 T 11-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily AL543_11665 ef59253368fdb2571ebe9a945ee35bb2 470 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 1.6E-28 T 11-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL543_11665 ef59253368fdb2571ebe9a945ee35bb2 470 Gene3D G3DSA:3.40.1380.20 336 467 1.3E-42 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL543_11665 ef59253368fdb2571ebe9a945ee35bb2 470 Pfam PF00224 Pyruvate kinase, barrel domain 1 340 1.7E-154 T 11-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL543_11665 ef59253368fdb2571ebe9a945ee35bb2 470 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 469 8.4E-188 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL543_11665 ef59253368fdb2571ebe9a945ee35bb2 470 Gene3D G3DSA:3.20.20.60 4 332 1.3E-147 T 11-10-2018 AL543_11665 ef59253368fdb2571ebe9a945ee35bb2 470 PRINTS PR01050 Pyruvate kinase family signature 313 329 3.5E-80 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL543_11665 ef59253368fdb2571ebe9a945ee35bb2 470 PRINTS PR01050 Pyruvate kinase family signature 244 268 3.5E-80 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL543_11665 ef59253368fdb2571ebe9a945ee35bb2 470 PRINTS PR01050 Pyruvate kinase family signature 186 200 3.5E-80 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL543_11665 ef59253368fdb2571ebe9a945ee35bb2 470 PRINTS PR01050 Pyruvate kinase family signature 294 312 3.5E-80 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL543_11665 ef59253368fdb2571ebe9a945ee35bb2 470 PRINTS PR01050 Pyruvate kinase family signature 59 75 3.5E-80 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL543_11665 ef59253368fdb2571ebe9a945ee35bb2 470 PRINTS PR01050 Pyruvate kinase family signature 269 293 3.5E-80 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL543_11665 ef59253368fdb2571ebe9a945ee35bb2 470 PRINTS PR01050 Pyruvate kinase family signature 217 243 3.5E-80 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL543_11665 ef59253368fdb2571ebe9a945ee35bb2 470 SUPERFAMILY SSF51621 1 339 8.03E-102 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AL543_11665 ef59253368fdb2571ebe9a945ee35bb2 470 Gene3D G3DSA:2.40.33.10 71 167 1.3E-147 T 11-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL543_11665 ef59253368fdb2571ebe9a945ee35bb2 470 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 11-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL543_11665 ef59253368fdb2571ebe9a945ee35bb2 470 SUPERFAMILY SSF52935 323 469 1.31E-34 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL543_11960 b4d742ab9f943c6484c38abbdf0f05f1 117 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 11-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_11960 b4d742ab9f943c6484c38abbdf0f05f1 117 Pfam PF01245 Ribosomal protein L19 3 113 2.1E-51 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_11960 b4d742ab9f943c6484c38abbdf0f05f1 117 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 1.2E-52 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_11960 b4d742ab9f943c6484c38abbdf0f05f1 117 PRINTS PR00061 Ribosomal protein L19 signature 34 63 6.5E-42 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_11960 b4d742ab9f943c6484c38abbdf0f05f1 117 PRINTS PR00061 Ribosomal protein L19 signature 4 33 6.5E-42 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_11960 b4d742ab9f943c6484c38abbdf0f05f1 117 PRINTS PR00061 Ribosomal protein L19 signature 88 113 6.5E-42 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_11960 b4d742ab9f943c6484c38abbdf0f05f1 117 SUPERFAMILY SSF50104 2 115 1.0E-48 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily AL543_11960 b4d742ab9f943c6484c38abbdf0f05f1 117 PIRSF PIRSF002191 1 117 7.8E-52 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_11960 b4d742ab9f943c6484c38abbdf0f05f1 117 Gene3D G3DSA:2.30.30.790 2 117 1.6E-17 T 11-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_11960 b4d742ab9f943c6484c38abbdf0f05f1 117 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 31.25 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_15250 b5fc9d299ede3db3964e96938040f67b 562 Gene3D G3DSA:3.40.50.10380 13 265 6.1E-115 T 11-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 AL543_15250 b5fc9d299ede3db3964e96938040f67b 562 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 1 562 72.381 T 11-10-2018 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38|MetaCyc: PWY-6339 AL543_15250 b5fc9d299ede3db3964e96938040f67b 562 SUPERFAMILY SSF51735 268 559 1.03E-94 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_15250 b5fc9d299ede3db3964e96938040f67b 562 ProSitePatterns PS00331 Malic enzymes signature. 264 280 - T 11-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 AL543_15250 b5fc9d299ede3db3964e96938040f67b 562 SMART SM00919 268 528 1.3E-132 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AL543_15250 b5fc9d299ede3db3964e96938040f67b 562 SMART SM01274 78 258 3.5E-107 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AL543_15250 b5fc9d299ede3db3964e96938040f67b 562 Gene3D G3DSA:3.40.50.720 266 562 1.4E-109 T 11-10-2018 AL543_15250 b5fc9d299ede3db3964e96938040f67b 562 SUPERFAMILY SSF53223 4 267 5.76E-109 T 11-10-2018 AL543_15250 b5fc9d299ede3db3964e96938040f67b 562 Pfam PF03949 Malic enzyme, NAD binding domain 268 528 3.2E-104 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AL543_15250 b5fc9d299ede3db3964e96938040f67b 562 Pfam PF00390 Malic enzyme, N-terminal domain 78 258 2.9E-78 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AL543_15250 b5fc9d299ede3db3964e96938040f67b 562 PRINTS PR00072 Malic enzyme signature 144 173 2.3E-72 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AL543_15250 b5fc9d299ede3db3964e96938040f67b 562 PRINTS PR00072 Malic enzyme signature 264 280 2.3E-72 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AL543_15250 b5fc9d299ede3db3964e96938040f67b 562 PRINTS PR00072 Malic enzyme signature 84 108 2.3E-72 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AL543_15250 b5fc9d299ede3db3964e96938040f67b 562 PRINTS PR00072 Malic enzyme signature 295 311 2.3E-72 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AL543_15250 b5fc9d299ede3db3964e96938040f67b 562 PRINTS PR00072 Malic enzyme signature 180 202 2.3E-72 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AL543_15250 b5fc9d299ede3db3964e96938040f67b 562 PRINTS PR00072 Malic enzyme signature 239 257 2.3E-72 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AL543_15250 b5fc9d299ede3db3964e96938040f67b 562 PRINTS PR00072 Malic enzyme signature 405 421 2.3E-72 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AL543_15250 b5fc9d299ede3db3964e96938040f67b 562 PIRSF PIRSF000106 2 560 1.0E-224 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AL543_08130 6bf00e32d447bf5c8f8d8f5ad6e5d171 127 Gene3D G3DSA:1.20.1300.10 1 127 3.0E-48 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL543_08130 6bf00e32d447bf5c8f8d8f5ad6e5d171 127 Pfam PF02300 Fumarate reductase subunit C 2 127 1.6E-49 T 11-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 AL543_08130 6bf00e32d447bf5c8f8d8f5ad6e5d171 127 PIRSF PIRSF000180 1 127 4.2E-56 T 11-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 AL543_08130 6bf00e32d447bf5c8f8d8f5ad6e5d171 127 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 7 127 5.0E-52 T 11-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 AL543_08130 6bf00e32d447bf5c8f8d8f5ad6e5d171 127 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 1 127 27.349 T 11-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 AL543_08130 6bf00e32d447bf5c8f8d8f5ad6e5d171 127 SUPERFAMILY SSF81343 1 127 6.98E-53 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL543_13925 40ef73523a7a656c4360b739a851ede1 505 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 8 490 23.765 T 11-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 AL543_13925 40ef73523a7a656c4360b739a851ede1 505 SUPERFAMILY SSF56317 216 485 4.84E-41 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AL543_13925 40ef73523a7a656c4360b739a851ede1 505 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 61 453 4.5E-98 T 11-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 AL543_13925 40ef73523a7a656c4360b739a851ede1 505 Pfam PF00795 Carbon-nitrogen hydrolase 221 470 5.7E-43 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 AL543_13925 40ef73523a7a656c4360b739a851ede1 505 Gene3D G3DSA:3.60.110.10 210 481 4.0E-14 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AL543_20145 9f850a00d90f51b567f8af1c996dc914 127 Pfam PF04247 Invasion gene expression up-regulator, SirB 2 123 4.0E-37 T 11-10-2018 IPR007360 Invasion gene expression up-regulator, SirB AL543_20145 9f850a00d90f51b567f8af1c996dc914 127 PIRSF PIRSF005610 1 121 2.2E-18 T 11-10-2018 IPR007360 Invasion gene expression up-regulator, SirB AL543_17430 725eac6e878b3e189bec8f2d10c42809 401 SUPERFAMILY SSF103473 13 399 9.94E-66 T 11-10-2018 IPR036259 MFS transporter superfamily AL543_17430 725eac6e878b3e189bec8f2d10c42809 401 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 17 395 5.6E-119 T 11-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 AL543_17430 725eac6e878b3e189bec8f2d10c42809 401 Pfam PF07690 Major Facilitator Superfamily 25 365 6.1E-50 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL543_17430 725eac6e878b3e189bec8f2d10c42809 401 Gene3D G3DSA:1.20.1720.10 18 396 2.1E-101 T 11-10-2018 AL543_05215 b13ece2874517f395125b4d150d98de8 221 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 23 29 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AL543_05215 b13ece2874517f395125b4d150d98de8 221 Gene3D G3DSA:3.40.50.150 1 217 1.4E-50 T 11-10-2018 AL543_05215 b13ece2874517f395125b4d150d98de8 221 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 155 177 2.9E-23 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 AL543_05215 b13ece2874517f395125b4d150d98de8 221 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 20 32 2.9E-23 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 AL543_05215 b13ece2874517f395125b4d150d98de8 221 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 66 85 2.9E-23 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 AL543_05215 b13ece2874517f395125b4d150d98de8 221 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 178 192 2.9E-23 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 AL543_05215 b13ece2874517f395125b4d150d98de8 221 SUPERFAMILY SSF53335 3 217 3.27E-47 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL543_05215 b13ece2874517f395125b4d150d98de8 221 Pfam PF01555 DNA methylase 20 136 6.2E-19 T 11-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 AL543_05215 b13ece2874517f395125b4d150d98de8 221 Pfam PF01555 DNA methylase 152 208 6.4E-19 T 11-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 AL543_11775 b9d5f6f76b19ea688e43fb302b3688d6 208 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 7 204 4.4E-69 T 11-10-2018 AL543_11775 b9d5f6f76b19ea688e43fb302b3688d6 208 Gene3D G3DSA:3.40.50.150 1 206 2.9E-76 T 11-10-2018 AL543_11775 b9d5f6f76b19ea688e43fb302b3688d6 208 SUPERFAMILY SSF53335 14 204 1.37E-44 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL543_11775 b9d5f6f76b19ea688e43fb302b3688d6 208 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 5 206 1.9E-78 T 11-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 AL543_11775 b9d5f6f76b19ea688e43fb302b3688d6 208 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 11-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 AL543_11775 b9d5f6f76b19ea688e43fb302b3688d6 208 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 1 208 39.094 T 11-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 AL543_15180 8bac10495cd2f7c32d99344a4e2a48a5 203 Gene3D G3DSA:3.40.50.880 3 195 2.4E-57 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL543_15180 8bac10495cd2f7c32d99344a4e2a48a5 203 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 9.7E-14 T 11-10-2018 AL543_15180 8bac10495cd2f7c32d99344a4e2a48a5 203 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 9.7E-14 T 11-10-2018 AL543_15180 8bac10495cd2f7c32d99344a4e2a48a5 203 PRINTS PR00096 Glutamine amidotransferase superfamily signature 168 181 9.7E-14 T 11-10-2018 AL543_15180 8bac10495cd2f7c32d99344a4e2a48a5 203 Pfam PF00117 Glutamine amidotransferase class-I 8 188 3.4E-44 T 11-10-2018 IPR017926 Glutamine amidotransferase AL543_15180 8bac10495cd2f7c32d99344a4e2a48a5 203 PRINTS PR00097 Anthranilate synthase component II signature 126 138 4.1E-35 T 11-10-2018 AL543_15180 8bac10495cd2f7c32d99344a4e2a48a5 203 PRINTS PR00097 Anthranilate synthase component II signature 81 92 4.1E-35 T 11-10-2018 AL543_15180 8bac10495cd2f7c32d99344a4e2a48a5 203 PRINTS PR00097 Anthranilate synthase component II signature 168 181 4.1E-35 T 11-10-2018 AL543_15180 8bac10495cd2f7c32d99344a4e2a48a5 203 PRINTS PR00097 Anthranilate synthase component II signature 54 63 4.1E-35 T 11-10-2018 AL543_15180 8bac10495cd2f7c32d99344a4e2a48a5 203 PRINTS PR00097 Anthranilate synthase component II signature 106 114 4.1E-35 T 11-10-2018 AL543_15180 8bac10495cd2f7c32d99344a4e2a48a5 203 PRINTS PR00097 Anthranilate synthase component II signature 6 20 4.1E-35 T 11-10-2018 AL543_15180 8bac10495cd2f7c32d99344a4e2a48a5 203 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 1.9E-5 T 11-10-2018 AL543_15180 8bac10495cd2f7c32d99344a4e2a48a5 203 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 1.9E-5 T 11-10-2018 AL543_15180 8bac10495cd2f7c32d99344a4e2a48a5 203 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 6 189 2.7E-53 T 11-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL543_15180 8bac10495cd2f7c32d99344a4e2a48a5 203 SUPERFAMILY SSF52317 2 194 2.89E-47 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL543_17590 56c5e5acf753b037cae0c89ece30a2cd 315 SUPERFAMILY SSF111369 169 245 5.23E-5 T 11-10-2018 AL543_17590 56c5e5acf753b037cae0c89ece30a2cd 315 Gene3D G3DSA:2.40.50.100 197 231 7.3E-14 T 11-10-2018 AL543_17590 56c5e5acf753b037cae0c89ece30a2cd 315 Gene3D G3DSA:1.10.287.470 98 163 4.0E-9 T 11-10-2018 AL543_17590 56c5e5acf753b037cae0c89ece30a2cd 315 Pfam PF13437 HlyD family secretion protein 196 276 9.5E-11 T 11-10-2018 AL543_17590 56c5e5acf753b037cae0c89ece30a2cd 315 SUPERFAMILY SSF111369 42 90 6.54E-5 T 11-10-2018 AL543_17590 56c5e5acf753b037cae0c89ece30a2cd 315 Gene3D G3DSA:2.40.50.100 33 66 1.0E-6 T 11-10-2018 AL543_17590 56c5e5acf753b037cae0c89ece30a2cd 315 Gene3D G3DSA:1.10.287.470 67 89 1.0E-6 T 11-10-2018 AL543_17590 56c5e5acf753b037cae0c89ece30a2cd 315 Gene3D G3DSA:1.10.287.470 169 196 7.3E-14 T 11-10-2018 AL543_17590 56c5e5acf753b037cae0c89ece30a2cd 315 Gene3D G3DSA:2.40.30.170 232 308 7.3E-14 T 11-10-2018 AL543_17670 a25e372f3001971bf3467abc87c6c11f 129 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 3 129 2.1E-45 T 11-10-2018 IPR014320 Phage shock protein, PspC AL543_17670 a25e372f3001971bf3467abc87c6c11f 129 Pfam PF04024 PspC domain 4 62 6.7E-17 T 11-10-2018 IPR007168 Phage shock protein, PspC, N-terminal AL543_19720 12e53d89adfd1c1599c1e3139380eeb1 262 Gene3D G3DSA:3.40.50.300 1 241 6.9E-56 T 11-10-2018 AL543_19720 12e53d89adfd1c1599c1e3139380eeb1 262 Pfam PF00005 ABC transporter 20 148 1.1E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_19720 12e53d89adfd1c1599c1e3139380eeb1 262 SMART SM00382 29 198 9.4E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_19720 12e53d89adfd1c1599c1e3139380eeb1 262 SUPERFAMILY SSF52540 3 230 1.1E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_12065 9063f8d928fe290e2826a87e8288e939 550 Pfam PF01740 STAS domain 440 533 1.5E-11 T 11-10-2018 IPR002645 STAS domain AL543_12065 9063f8d928fe290e2826a87e8288e939 550 SUPERFAMILY SSF52091 439 541 1.96E-11 T 11-10-2018 IPR036513 STAS domain superfamily AL543_12065 9063f8d928fe290e2826a87e8288e939 550 Pfam PF00916 Sulfate permease family 11 376 6.7E-84 T 11-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AL543_12065 9063f8d928fe290e2826a87e8288e939 550 Gene3D G3DSA:3.30.750.24 427 549 7.0E-16 T 11-10-2018 IPR036513 STAS domain superfamily AL543_00855 b24418dd2e253e0c02339361fcd03cc0 442 TIGRFAM TIGR00797 matE: MATE efflux family protein 18 404 3.4E-48 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL543_00855 b24418dd2e253e0c02339361fcd03cc0 442 Pfam PF01554 MatE 18 178 1.6E-22 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL543_00855 b24418dd2e253e0c02339361fcd03cc0 442 Pfam PF01554 MatE 237 390 2.4E-16 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL543_00855 b24418dd2e253e0c02339361fcd03cc0 442 PIRSF PIRSF006603 2 437 1.6E-87 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL543_11970 87f246837cbacd9609cc1b25ab758b98 456 Gene3D G3DSA:2.40.10.120 38 262 2.6E-84 T 11-10-2018 AL543_11970 87f246837cbacd9609cc1b25ab758b98 456 Gene3D G3DSA:2.30.42.10 266 362 4.7E-28 T 11-10-2018 AL543_11970 87f246837cbacd9609cc1b25ab758b98 456 PRINTS PR00834 HtrA/DegQ protease family signature 103 115 1.8E-57 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL543_11970 87f246837cbacd9609cc1b25ab758b98 456 PRINTS PR00834 HtrA/DegQ protease family signature 222 239 1.8E-57 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL543_11970 87f246837cbacd9609cc1b25ab758b98 456 PRINTS PR00834 HtrA/DegQ protease family signature 165 189 1.8E-57 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL543_11970 87f246837cbacd9609cc1b25ab758b98 456 PRINTS PR00834 HtrA/DegQ protease family signature 124 144 1.8E-57 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL543_11970 87f246837cbacd9609cc1b25ab758b98 456 PRINTS PR00834 HtrA/DegQ protease family signature 200 217 1.8E-57 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL543_11970 87f246837cbacd9609cc1b25ab758b98 456 PRINTS PR00834 HtrA/DegQ protease family signature 308 320 1.8E-57 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL543_11970 87f246837cbacd9609cc1b25ab758b98 456 Gene3D G3DSA:2.30.42.10 363 456 3.2E-27 T 11-10-2018 AL543_11970 87f246837cbacd9609cc1b25ab758b98 456 SUPERFAMILY SSF50494 38 264 2.85E-65 T 11-10-2018 IPR009003 Peptidase S1, PA clan AL543_11970 87f246837cbacd9609cc1b25ab758b98 456 Pfam PF13365 Trypsin-like peptidase domain 93 229 3.8E-31 T 11-10-2018 AL543_11970 87f246837cbacd9609cc1b25ab758b98 456 SMART SM00228 375 448 1.0E-7 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AL543_11970 87f246837cbacd9609cc1b25ab758b98 456 SMART SM00228 268 350 3.4E-16 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AL543_11970 87f246837cbacd9609cc1b25ab758b98 456 SUPERFAMILY SSF50156 384 455 3.29E-14 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AL543_11970 87f246837cbacd9609cc1b25ab758b98 456 Pfam PF13180 PDZ domain 270 359 4.8E-18 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AL543_11970 87f246837cbacd9609cc1b25ab758b98 456 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 40 454 1.1E-165 T 11-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 AL543_11970 87f246837cbacd9609cc1b25ab758b98 456 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 373 444 2.2E-10 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AL543_11970 87f246837cbacd9609cc1b25ab758b98 456 SUPERFAMILY SSF50156 226 351 2.76E-26 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AL543_15960 7088db577c3762cef016157b9809df4b 1018 Gene3D G3DSA:3.40.710.10 799 1001 1.0E-13 T 11-10-2018 AL543_15960 7088db577c3762cef016157b9809df4b 1018 SUPERFAMILY SSF53955 151 371 5.34E-9 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AL543_15960 7088db577c3762cef016157b9809df4b 1018 Gene3D G3DSA:1.10.3810.10 134 372 2.3E-5 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL543_15960 7088db577c3762cef016157b9809df4b 1018 SUPERFAMILY SSF56601 734 1005 7.43E-26 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AL543_15960 7088db577c3762cef016157b9809df4b 1018 SUPERFAMILY SSF56601 564 627 1.29E-5 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AL543_15960 7088db577c3762cef016157b9809df4b 1018 Pfam PF00912 Transglycosylase 143 339 9.1E-23 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL543_17735 5b01f3a43ac1ebeb7736c60c4445e6be 353 Pfam PF03193 RsgA GTPase 85 258 8.7E-49 T 11-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 AL543_17735 5b01f3a43ac1ebeb7736c60c4445e6be 353 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 35 322 31.793 T 11-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 AL543_17735 5b01f3a43ac1ebeb7736c60c4445e6be 353 Gene3D G3DSA:3.40.50.300 87 258 2.7E-44 T 11-10-2018 AL543_17735 5b01f3a43ac1ebeb7736c60c4445e6be 353 SUPERFAMILY SSF52540 103 319 6.92E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_17735 5b01f3a43ac1ebeb7736c60c4445e6be 353 Gene3D G3DSA:1.10.40.50 261 351 5.3E-22 T 11-10-2018 AL543_17735 5b01f3a43ac1ebeb7736c60c4445e6be 353 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 69 314 6.6E-48 T 11-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 AL543_10400 a063823e6418303a4d28fa99faeb99c6 429 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 421 2.4E-29 T 11-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL543_10400 a063823e6418303a4d28fa99faeb99c6 429 SUPERFAMILY SSF56059 104 323 1.24E-67 T 11-10-2018 AL543_10400 a063823e6418303a4d28fa99faeb99c6 429 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 1.2E-186 T 11-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL543_10400 a063823e6418303a4d28fa99faeb99c6 429 Gene3D G3DSA:3.30.470.20 191 329 1.1E-60 T 11-10-2018 AL543_10400 a063823e6418303a4d28fa99faeb99c6 429 SMART SM01209 103 296 1.3E-139 T 11-10-2018 AL543_10400 a063823e6418303a4d28fa99faeb99c6 429 SUPERFAMILY SSF51246 329 424 9.94E-34 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AL543_10400 a063823e6418303a4d28fa99faeb99c6 429 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 11-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL543_10400 a063823e6418303a4d28fa99faeb99c6 429 Gene3D G3DSA:3.40.50.20 2 95 3.6E-39 T 11-10-2018 AL543_10400 a063823e6418303a4d28fa99faeb99c6 429 Gene3D G3DSA:3.90.600.10 330 429 2.4E-34 T 11-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL543_10400 a063823e6418303a4d28fa99faeb99c6 429 SMART SM01210 330 423 2.0E-55 T 11-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL543_10400 a063823e6418303a4d28fa99faeb99c6 429 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 43.881 T 11-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL543_10400 a063823e6418303a4d28fa99faeb99c6 429 SUPERFAMILY SSF52440 1 103 8.06E-38 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AL543_10400 a063823e6418303a4d28fa99faeb99c6 429 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 5.6E-36 T 11-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL543_10400 a063823e6418303a4d28fa99faeb99c6 429 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 2.7E-82 T 11-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL543_10400 a063823e6418303a4d28fa99faeb99c6 429 Gene3D G3DSA:3.30.1490.20 121 190 3.4E-28 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AL543_14090 7b22c1a52de5c0908d8bc4056a086341 528 Pfam PF00999 Sodium/hydrogen exchanger family 4 348 2.4E-35 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AL543_14090 7b22c1a52de5c0908d8bc4056a086341 528 SUPERFAMILY SSF51735 387 518 3.86E-16 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_14090 7b22c1a52de5c0908d8bc4056a086341 528 Pfam PF02254 TrkA-N domain 388 504 9.7E-21 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AL543_14090 7b22c1a52de5c0908d8bc4056a086341 528 Gene3D G3DSA:3.40.50.720 379 528 2.9E-33 T 11-10-2018 AL543_14090 7b22c1a52de5c0908d8bc4056a086341 528 Gene3D G3DSA:1.20.1530.20 2 363 1.7E-45 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily AL543_15930 2124dace5f2de15395f68684a9d4ba2d 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 394 5.9E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_15930 2124dace5f2de15395f68684a9d4ba2d 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 417 5.9E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_15930 2124dace5f2de15395f68684a9d4ba2d 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 435 5.9E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_15930 2124dace5f2de15395f68684a9d4ba2d 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 380 5.9E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_15930 2124dace5f2de15395f68684a9d4ba2d 449 Gene3D G3DSA:2.60.120.10 17 129 5.7E-12 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL543_15930 2124dace5f2de15395f68684a9d4ba2d 449 Gene3D G3DSA:3.30.565.10 289 445 1.1E-31 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_15930 2124dace5f2de15395f68684a9d4ba2d 449 SMART SM00387 327 438 3.1E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_15930 2124dace5f2de15395f68684a9d4ba2d 449 Pfam PF00027 Cyclic nucleotide-binding domain 20 99 3.0E-9 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AL543_15930 2124dace5f2de15395f68684a9d4ba2d 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 331 437 5.1E-15 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_15930 2124dace5f2de15395f68684a9d4ba2d 449 SUPERFAMILY SSF55874 291 435 2.49E-28 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_15930 2124dace5f2de15395f68684a9d4ba2d 449 SUPERFAMILY SSF51206 19 129 1.31E-15 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like AL543_15930 2124dace5f2de15395f68684a9d4ba2d 449 Gene3D G3DSA:1.10.287.130 130 282 2.8E-10 T 11-10-2018 AL543_07560 4506a198dd76aeaca6af2ad989a9b05e 531 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 11 517 1.1E-165 T 11-10-2018 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 AL543_07560 4506a198dd76aeaca6af2ad989a9b05e 531 Gene3D G3DSA:1.10.3720.10 5 263 5.2E-41 T 11-10-2018 IPR035906 MetI-like superfamily AL543_07560 4506a198dd76aeaca6af2ad989a9b05e 531 Gene3D G3DSA:1.10.3720.10 282 529 3.4E-27 T 11-10-2018 IPR035906 MetI-like superfamily AL543_07560 4506a198dd76aeaca6af2ad989a9b05e 531 SUPERFAMILY SSF161098 11 256 3.83E-41 T 11-10-2018 IPR035906 MetI-like superfamily AL543_07560 4506a198dd76aeaca6af2ad989a9b05e 531 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 360 516 1.2E-7 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL543_07560 4506a198dd76aeaca6af2ad989a9b05e 531 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 64 259 2.4E-9 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL543_07560 4506a198dd76aeaca6af2ad989a9b05e 531 SUPERFAMILY SSF161098 277 522 1.68E-32 T 11-10-2018 IPR035906 MetI-like superfamily AL543_12120 b0a128b78662a29d5c56ef2a4f428958 778 SUPERFAMILY SSF56601 330 772 2.25E-111 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AL543_12120 b0a128b78662a29d5c56ef2a4f428958 778 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 181 715 2.7E-158 T 11-10-2018 AL543_12120 b0a128b78662a29d5c56ef2a4f428958 778 PIRSF PIRSF002799 4 778 0.0 T 11-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL543_12120 b0a128b78662a29d5c56ef2a4f428958 778 Pfam PF00905 Penicillin binding protein transpeptidase domain 440 679 3.1E-23 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AL543_12120 b0a128b78662a29d5c56ef2a4f428958 778 Gene3D G3DSA:1.10.3810.10 169 372 2.9E-266 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL543_12120 b0a128b78662a29d5c56ef2a4f428958 778 Pfam PF14814 Bifunctional transglycosylase second domain 81 165 1.7E-27 T 11-10-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL543_12120 b0a128b78662a29d5c56ef2a4f428958 778 SUPERFAMILY SSF53955 172 370 1.38E-67 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AL543_12120 b0a128b78662a29d5c56ef2a4f428958 778 Gene3D G3DSA:3.30.2060.10 79 168 2.9E-266 T 11-10-2018 AL543_12120 b0a128b78662a29d5c56ef2a4f428958 778 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 36 759 0.0 T 11-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL543_12120 b0a128b78662a29d5c56ef2a4f428958 778 Pfam PF00912 Transglycosylase 177 348 7.1E-58 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL543_12120 b0a128b78662a29d5c56ef2a4f428958 778 Gene3D G3DSA:3.40.710.10 71 728 2.9E-266 T 11-10-2018 AL543_16075 5789df41b22f88a85acc94bb14f7e4b2 357 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 12 354 4.5E-136 T 11-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 AL543_16075 5789df41b22f88a85acc94bb14f7e4b2 357 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 6 143 2.0E-58 T 11-10-2018 AL543_16075 5789df41b22f88a85acc94bb14f7e4b2 357 PIRSF PIRSF009283 1 355 3.6E-127 T 11-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 AL543_16075 5789df41b22f88a85acc94bb14f7e4b2 357 Gene3D G3DSA:3.10.180.10 158 355 1.3E-70 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL543_16075 5789df41b22f88a85acc94bb14f7e4b2 357 SUPERFAMILY SSF54593 5 341 1.02E-78 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL543_16075 5789df41b22f88a85acc94bb14f7e4b2 357 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 163 275 5.6E-15 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL543_16075 5789df41b22f88a85acc94bb14f7e4b2 357 Gene3D G3DSA:3.10.180.10 3 155 4.4E-48 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL543_10505 2773cce1c009d47c165e4e956f18054d 209 SMART SM00479 29 202 3.8E-21 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL543_10505 2773cce1c009d47c165e4e956f18054d 209 Pfam PF00929 Exonuclease 31 193 4.3E-20 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL543_10505 2773cce1c009d47c165e4e956f18054d 209 SUPERFAMILY SSF53098 24 199 6.84E-36 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_10505 2773cce1c009d47c165e4e956f18054d 209 Gene3D G3DSA:3.30.420.10 22 201 2.3E-34 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AL543_16570 cb17e4334d4f28085971622060dc5422 377 Pfam PF08402 TOBE domain 292 371 9.5E-12 T 11-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 AL543_16570 cb17e4334d4f28085971622060dc5422 377 Gene3D G3DSA:2.40.50.940 236 298 5.2E-11 T 11-10-2018 AL543_16570 cb17e4334d4f28085971622060dc5422 377 SUPERFAMILY SSF50331 251 372 1.87E-8 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AL543_16570 cb17e4334d4f28085971622060dc5422 377 Pfam PF00005 ABC transporter 35 174 8.3E-36 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_16570 cb17e4334d4f28085971622060dc5422 377 Gene3D G3DSA:3.40.50.300 17 235 3.9E-70 T 11-10-2018 AL543_16570 cb17e4334d4f28085971622060dc5422 377 SMART SM00382 42 225 5.1E-20 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_16570 cb17e4334d4f28085971622060dc5422 377 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 48 371 1.6E-157 T 11-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 AL543_16570 cb17e4334d4f28085971622060dc5422 377 Gene3D G3DSA:2.40.50.140 299 316 5.2E-11 T 11-10-2018 AL543_16570 cb17e4334d4f28085971622060dc5422 377 SUPERFAMILY SSF52540 18 257 1.77E-88 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_16570 cb17e4334d4f28085971622060dc5422 377 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_17780 e29564974c5ff8de629d8a651434b935 77 Pfam PF06146 Phosphate-starvation-inducible E 8 68 8.5E-11 T 11-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like AL543_17780 e29564974c5ff8de629d8a651434b935 77 TIGRFAM TIGR02647 DNA: TIGR02647 family protein 1 77 7.9E-39 T 11-10-2018 IPR013468 Conserved hypothetical protein CHP02647 AL543_14200 5e99634a0cf6c180c0509beff5290357 195 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 114 125 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL543_14200 5e99634a0cf6c180c0509beff5290357 195 SUPERFAMILY SSF54862 37 172 5.24E-31 T 11-10-2018 AL543_14200 5e99634a0cf6c180c0509beff5290357 195 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 4 166 25.895 T 11-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 AL543_14200 5e99634a0cf6c180c0509beff5290357 195 PIRSF PIRSF005784 3 188 3.2E-86 T 11-10-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 AL543_14200 5e99634a0cf6c180c0509beff5290357 195 Gene3D G3DSA:1.10.15.40 38 81 6.9E-8 T 11-10-2018 AL543_14200 5e99634a0cf6c180c0509beff5290357 195 Pfam PF14697 4Fe-4S dicluster domain 107 161 1.5E-17 T 11-10-2018 AL543_14200 5e99634a0cf6c180c0509beff5290357 195 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 144 155 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL543_14200 5e99634a0cf6c180c0509beff5290357 195 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 1 187 1.3E-88 T 11-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 AL543_14200 5e99634a0cf6c180c0509beff5290357 195 Gene3D G3DSA:3.30.70.20 82 181 1.2E-22 T 11-10-2018 AL543_14200 5e99634a0cf6c180c0509beff5290357 195 Pfam PF04060 Putative Fe-S cluster 44 75 8.6E-15 T 11-10-2018 IPR007202 4Fe-4S domain GO:0051536 AL543_03365 a197d7b9b1dc9e6dd440adf9e587991e 106 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 1 95 24.209 T 11-10-2018 IPR007458 Protein of unknown function DUF496 AL543_03365 a197d7b9b1dc9e6dd440adf9e587991e 106 Pfam PF04363 Protein of unknown function (DUF496) 1 92 3.7E-43 T 11-10-2018 IPR007458 Protein of unknown function DUF496 AL543_03365 a197d7b9b1dc9e6dd440adf9e587991e 106 PIRSF PIRSF028773 1 104 2.6E-48 T 11-10-2018 IPR007458 Protein of unknown function DUF496 AL543_03365 a197d7b9b1dc9e6dd440adf9e587991e 106 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 1 92 6.0E-45 T 11-10-2018 IPR007458 Protein of unknown function DUF496 AL543_17080 e2072f087d4045c0f91ef5eff43e5440 370 SMART SM00849 87 281 3.3E-19 T 11-10-2018 IPR001279 Metallo-beta-lactamase AL543_17080 e2072f087d4045c0f91ef5eff43e5440 370 Gene3D G3DSA:3.60.15.10 65 306 7.0E-33 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AL543_17080 e2072f087d4045c0f91ef5eff43e5440 370 Pfam PF00753 Metallo-beta-lactamase superfamily 87 254 1.1E-14 T 11-10-2018 IPR001279 Metallo-beta-lactamase AL543_17080 e2072f087d4045c0f91ef5eff43e5440 370 SUPERFAMILY SSF56281 70 309 2.38E-40 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AL543_19095 6723eec3be14e11ca4e8d5f8c633fd9f 290 SMART SM00978 159 290 6.1E-35 T 11-10-2018 IPR007379 Tim44-like domain AL543_19095 6723eec3be14e11ca4e8d5f8c633fd9f 290 Pfam PF04280 Tim44-like domain 168 289 4.0E-14 T 11-10-2018 IPR007379 Tim44-like domain AL543_19095 6723eec3be14e11ca4e8d5f8c633fd9f 290 Gene3D G3DSA:3.10.450.240 167 290 5.2E-6 T 11-10-2018 AL543_19095 6723eec3be14e11ca4e8d5f8c633fd9f 290 Pfam PF07466 Protein of unknown function (DUF1517) 28 128 2.5E-6 T 11-10-2018 IPR010903 Protein of unknown function DUF1517 AL543_19095 6723eec3be14e11ca4e8d5f8c633fd9f 290 SUPERFAMILY SSF54427 169 289 1.18E-15 T 11-10-2018 IPR032710 NTF2-like domain superfamily AL543_15340 1f53babc1f5b3b8509f0682ec4a16854 315 SUPERFAMILY SSF56935 27 208 2.14E-5 T 11-10-2018 AL543_15340 1f53babc1f5b3b8509f0682ec4a16854 315 Pfam PF11383 Protein of unknown function (DUF3187) 5 314 3.8E-119 T 11-10-2018 IPR021523 Protein of unknown function DUF3187 AL543_15460 65b5765fa1ae73fbce2b2dceb6e234ee 393 SUPERFAMILY SSF56059 113 315 1.61E-58 T 11-10-2018 AL543_15460 65b5765fa1ae73fbce2b2dceb6e234ee 393 SUPERFAMILY SSF52440 3 112 1.09E-35 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AL543_15460 65b5765fa1ae73fbce2b2dceb6e234ee 393 Pfam PF02222 ATP-grasp domain 123 295 1.4E-57 T 11-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type AL543_15460 65b5765fa1ae73fbce2b2dceb6e234ee 393 SUPERFAMILY SSF51246 319 391 2.67E-18 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AL543_15460 65b5765fa1ae73fbce2b2dceb6e234ee 393 Hamap MF_01643 Formate-dependent phosphoribosylglycinamide formyltransferase [purT]. 8 392 52.038 T 11-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 AL543_15460 65b5765fa1ae73fbce2b2dceb6e234ee 393 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 14 392 1.0E-197 T 11-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 AL543_15460 65b5765fa1ae73fbce2b2dceb6e234ee 393 Gene3D G3DSA:3.30.1490.20 123 196 8.6E-34 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AL543_15460 65b5765fa1ae73fbce2b2dceb6e234ee 393 Gene3D G3DSA:3.40.50.20 2 122 2.4E-53 T 11-10-2018 AL543_15460 65b5765fa1ae73fbce2b2dceb6e234ee 393 Gene3D G3DSA:3.30.470.20 197 391 2.1E-60 T 11-10-2018 AL543_02990 bc078fb2bc6cb06bf3c04d169f2936d7 183 Gene3D G3DSA:2.60.40.420 65 183 1.3E-18 T 11-10-2018 IPR008972 Cupredoxin AL543_02990 bc078fb2bc6cb06bf3c04d169f2936d7 183 SUPERFAMILY SSF49503 73 181 2.18E-23 T 11-10-2018 IPR008972 Cupredoxin AL543_06980 d6dbcaf728eba2913f1389d3bd2dc417 476 Pfam PF00294 pfkB family carbohydrate kinase 13 302 8.2E-47 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB AL543_06980 d6dbcaf728eba2913f1389d3bd2dc417 476 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 42.979 T 11-10-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 AL543_06980 d6dbcaf728eba2913f1389d3bd2dc417 476 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 332 472 1.0E-61 T 11-10-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 AL543_06980 d6dbcaf728eba2913f1389d3bd2dc417 476 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AL543_06980 d6dbcaf728eba2913f1389d3bd2dc417 476 Pfam PF01467 Cytidylyltransferase-like 345 470 5.7E-15 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AL543_06980 d6dbcaf728eba2913f1389d3bd2dc417 476 SUPERFAMILY SSF53613 12 307 4.37E-58 T 11-10-2018 IPR029056 Ribokinase-like AL543_06980 d6dbcaf728eba2913f1389d3bd2dc417 476 Gene3D G3DSA:3.40.50.620 322 475 4.2E-38 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL543_06980 d6dbcaf728eba2913f1389d3bd2dc417 476 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 7 312 1.9E-125 T 11-10-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 AL543_06980 d6dbcaf728eba2913f1389d3bd2dc417 476 Gene3D G3DSA:3.40.1190.20 5 310 1.6E-111 T 11-10-2018 IPR029056 Ribokinase-like AL543_06980 d6dbcaf728eba2913f1389d3bd2dc417 476 SUPERFAMILY SSF52374 340 471 9.19E-24 T 11-10-2018 AL543_06980 d6dbcaf728eba2913f1389d3bd2dc417 476 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 6.2E-18 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AL543_13305 92ec68957829a47429b05e8849ccdc3a 538 Gene3D G3DSA:3.30.70.2700 1 80 3.5E-29 T 11-10-2018 AL543_13305 92ec68957829a47429b05e8849ccdc3a 538 Gene3D G3DSA:3.50.50.60 85 304 6.3E-90 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_13305 92ec68957829a47429b05e8849ccdc3a 538 Gene3D G3DSA:3.50.50.60 471 533 1.0E-15 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_13305 92ec68957829a47429b05e8849ccdc3a 538 Pfam PF01593 Flavin containing amine oxidoreductase 214 268 1.1E-4 T 11-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 AL543_13305 92ec68957829a47429b05e8849ccdc3a 538 PIRSF PIRSF038984 1 534 3.7E-238 T 11-10-2018 IPR028348 FAD dependent protein AL543_13305 92ec68957829a47429b05e8849ccdc3a 538 SUPERFAMILY SSF51905 100 529 6.26E-36 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_06605 cf0108afd97274c8a64180a522e2ca40 183 Pfam PF01814 Hemerythrin HHE cation binding domain 3 135 2.0E-14 T 11-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 AL543_06605 cf0108afd97274c8a64180a522e2ca40 183 Gene3D G3DSA:1.20.120.520 1 155 5.0E-18 T 11-10-2018 AL543_12670 e98e1db4969658020de6d07b77ae55b5 240 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 24 238 1.0E-64 T 11-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase AL543_12670 e98e1db4969658020de6d07b77ae55b5 240 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 17 237 1.4E-75 T 11-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase AL543_12670 e98e1db4969658020de6d07b77ae55b5 240 SUPERFAMILY SSF64438 2 239 9.71E-87 T 11-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic AL543_12670 e98e1db4969658020de6d07b77ae55b5 240 Gene3D G3DSA:3.60.140.10 1 240 2.8E-91 T 11-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily AL543_07965 510b186476e5f48c009aa2b331bbea81 869 SUPERFAMILY SSF56219 473 845 2.88E-28 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AL543_07965 510b186476e5f48c009aa2b331bbea81 869 Pfam PF00932 Lamin Tail Domain 25 134 6.3E-16 T 11-10-2018 IPR001322 Lamin tail domain AL543_07965 510b186476e5f48c009aa2b331bbea81 869 SUPERFAMILY SSF74853 28 132 1.44E-6 T 11-10-2018 IPR036415 Lamin tail domain superfamily AL543_20075 b9f51279f608608e62e3c80c58994127 155 Gene3D G3DSA:3.40.30.10 3 155 4.7E-46 T 11-10-2018 AL543_20075 b9f51279f608608e62e3c80c58994127 155 Pfam PF00578 AhpC/TSA family 7 134 5.9E-35 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AL543_20075 b9f51279f608608e62e3c80c58994127 155 SUPERFAMILY SSF52833 1 153 3.18E-46 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL543_16475 5f6c49517c6170263ba1bbea9bf2c4e6 525 Gene3D G3DSA:1.10.1370.30 29 525 2.1E-199 T 11-10-2018 AL543_16475 5f6c49517c6170263ba1bbea9bf2c4e6 525 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 291 310 8.7E-46 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AL543_16475 5f6c49517c6170263ba1bbea9bf2c4e6 525 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 430 451 8.7E-46 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AL543_16475 5f6c49517c6170263ba1bbea9bf2c4e6 525 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 175 195 8.7E-46 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AL543_16475 5f6c49517c6170263ba1bbea9bf2c4e6 525 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 360 379 8.7E-46 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AL543_16475 5f6c49517c6170263ba1bbea9bf2c4e6 525 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 271 290 8.7E-46 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AL543_16475 5f6c49517c6170263ba1bbea9bf2c4e6 525 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 318 334 8.7E-46 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AL543_16475 5f6c49517c6170263ba1bbea9bf2c4e6 525 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 474 492 8.7E-46 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AL543_16475 5f6c49517c6170263ba1bbea9bf2c4e6 525 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 39 522 2.0E-92 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AL543_16475 5f6c49517c6170263ba1bbea9bf2c4e6 525 PIRSF PIRSF006615 29 525 1.7E-199 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AL543_16475 5f6c49517c6170263ba1bbea9bf2c4e6 525 SUPERFAMILY SSF55486 29 523 5.74E-121 T 11-10-2018 AL543_09985 a553d48ca415d7be68f520fd38201025 355 Gene3D G3DSA:3.40.1090.10 5 353 8.3E-66 T 11-10-2018 AL543_09985 a553d48ca415d7be68f520fd38201025 355 Pfam PF01734 Patatin-like phospholipase 17 209 1.4E-23 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AL543_09985 a553d48ca415d7be68f520fd38201025 355 SUPERFAMILY SSF52151 10 338 8.89E-55 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AL543_13070 850248009b469a224523e638d0338398 621 Gene3D G3DSA:3.40.50.300 284 395 3.8E-5 T 11-10-2018 AL543_13070 850248009b469a224523e638d0338398 621 Gene3D G3DSA:3.40.50.300 459 601 4.7E-15 T 11-10-2018 AL543_13070 850248009b469a224523e638d0338398 621 Gene3D G3DSA:3.40.50.300 23 280 7.2E-41 T 11-10-2018 AL543_13070 850248009b469a224523e638d0338398 621 Pfam PF13361 UvrD-like helicase C-terminal domain 522 590 1.4E-13 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AL543_13070 850248009b469a224523e638d0338398 621 Pfam PF13245 AAA domain 28 258 1.5E-16 T 11-10-2018 AL543_13070 850248009b469a224523e638d0338398 621 SUPERFAMILY SSF52540 16 593 9.76E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_11500 438be993a706b0b44587a73d35cab3d4 239 Gene3D G3DSA:3.40.50.150 29 239 1.7E-71 T 11-10-2018 AL543_11500 438be993a706b0b44587a73d35cab3d4 239 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 47 238 1.2E-67 T 11-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 AL543_11500 438be993a706b0b44587a73d35cab3d4 239 SUPERFAMILY SSF53335 15 236 4.29E-35 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL543_11500 438be993a706b0b44587a73d35cab3d4 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 23 238 30.495 T 11-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 AL543_11500 438be993a706b0b44587a73d35cab3d4 239 Pfam PF02390 Putative methyltransferase 62 232 4.7E-59 T 11-10-2018 AL543_17580 b62ff7ee47553c5f5fb94266f5c74203 288 Pfam PF00892 EamA-like transporter family 8 138 3.8E-11 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL543_17580 b62ff7ee47553c5f5fb94266f5c74203 288 Pfam PF00892 EamA-like transporter family 150 279 8.8E-20 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL543_17580 b62ff7ee47553c5f5fb94266f5c74203 288 SUPERFAMILY SSF103481 41 142 1.07E-10 T 11-10-2018 AL543_17580 b62ff7ee47553c5f5fb94266f5c74203 288 SUPERFAMILY SSF103481 182 280 7.19E-13 T 11-10-2018 AL543_20615 41c421a59b2aee660b532568f7007d25 38 Pfam PF10940 Protein of unknown function (DUF2618) 6 33 6.6E-15 T 11-10-2018 IPR021237 Protein of unknown function DUF2618 AL543_09250 6f0946f170eda51874063d0e01e68f36 256 Pfam PF05690 Thiazole biosynthesis protein ThiG 4 247 4.5E-110 T 11-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 AL543_09250 6f0946f170eda51874063d0e01e68f36 256 Hamap MF_00443 Thiazole synthase [thiG]. 1 253 43.368 T 11-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 AL543_09250 6f0946f170eda51874063d0e01e68f36 256 Gene3D G3DSA:3.20.20.70 1 253 4.9E-111 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_09250 6f0946f170eda51874063d0e01e68f36 256 SUPERFAMILY SSF110399 1 235 8.24E-86 T 11-10-2018 AL543_14350 30eb7b06ad08731133fd42636402850e 435 Pfam PF00108 Thiolase, N-terminal domain 14 286 4.5E-62 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 AL543_14350 30eb7b06ad08731133fd42636402850e 435 Gene3D G3DSA:3.40.47.10 5 434 2.9E-110 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL543_14350 30eb7b06ad08731133fd42636402850e 435 SUPERFAMILY SSF53901 14 294 5.99E-60 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL543_14350 30eb7b06ad08731133fd42636402850e 435 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 16 433 1.9E-126 T 11-10-2018 IPR002155 Thiolase GO:0016747 AL543_14350 30eb7b06ad08731133fd42636402850e 435 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 1 435 66.207 T 11-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 AL543_14350 30eb7b06ad08731133fd42636402850e 435 SUPERFAMILY SSF53901 296 434 1.6E-31 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL543_14350 30eb7b06ad08731133fd42636402850e 435 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 6 435 2.0E-262 T 11-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 AL543_14350 30eb7b06ad08731133fd42636402850e 435 ProSitePatterns PS00737 Thiolases signature 2. 381 397 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 AL543_14350 30eb7b06ad08731133fd42636402850e 435 PIRSF PIRSF000429 8 435 1.0E-117 T 11-10-2018 IPR002155 Thiolase GO:0016747 AL543_14350 30eb7b06ad08731133fd42636402850e 435 Pfam PF02803 Thiolase, C-terminal domain 295 433 2.5E-35 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AL543_05020 658d769cef4f9fe0ebef8d57a9bcef25 402 Pfam PF01609 Transposase DDE domain 90 322 8.1E-24 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AL543_05020 658d769cef4f9fe0ebef8d57a9bcef25 402 SUPERFAMILY SSF53098 1 381 1.59E-67 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_16290 658d769cef4f9fe0ebef8d57a9bcef25 402 Pfam PF01609 Transposase DDE domain 90 322 8.1E-24 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AL543_16290 658d769cef4f9fe0ebef8d57a9bcef25 402 SUPERFAMILY SSF53098 1 381 1.59E-67 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_04915 658d769cef4f9fe0ebef8d57a9bcef25 402 Pfam PF01609 Transposase DDE domain 90 322 8.1E-24 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AL543_04915 658d769cef4f9fe0ebef8d57a9bcef25 402 SUPERFAMILY SSF53098 1 381 1.59E-67 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_04655 b62f04e4179852ae9799881c889269af 329 SUPERFAMILY SSF52540 4 166 1.89E-25 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_04655 b62f04e4179852ae9799881c889269af 329 Gene3D G3DSA:3.40.50.300 2 196 2.7E-46 T 11-10-2018 AL543_04655 b62f04e4179852ae9799881c889269af 329 SMART SM00833 241 324 0.0059 T 11-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AL543_04655 b62f04e4179852ae9799881c889269af 329 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 178 7.6E-44 T 11-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AL543_02760 99ec74c1d21a0cbfbb8b55e1acacea48 665 Pfam PF08376 Nitrate and nitrite sensing 59 295 8.5E-32 T 11-10-2018 IPR013587 Nitrate/nitrite sensing protein AL543_02760 99ec74c1d21a0cbfbb8b55e1acacea48 665 SMART SM00283 402 663 7.0E-59 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_02760 99ec74c1d21a0cbfbb8b55e1acacea48 665 SMART SM00304 334 387 0.0011 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_02760 99ec74c1d21a0cbfbb8b55e1acacea48 665 Gene3D G3DSA:1.10.287.950 334 665 7.3E-62 T 11-10-2018 AL543_02760 99ec74c1d21a0cbfbb8b55e1acacea48 665 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 475 629 1.4E-41 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_02760 99ec74c1d21a0cbfbb8b55e1acacea48 665 SUPERFAMILY SSF58104 355 664 8.76E-63 T 11-10-2018 AL543_01105 924f3ad3d4be55614c1809900a36e91b 1039 SUPERFAMILY SSF53720 556 1038 2.75E-130 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AL543_01105 924f3ad3d4be55614c1809900a36e91b 1039 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 73 187 6.6E-44 T 11-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AL543_01105 924f3ad3d4be55614c1809900a36e91b 1039 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 525 1038 9.7E-279 T 11-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AL543_01105 924f3ad3d4be55614c1809900a36e91b 1039 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 839 850 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AL543_01105 924f3ad3d4be55614c1809900a36e91b 1039 Gene3D G3DSA:3.40.309.10 814 1006 4.3E-151 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AL543_01105 924f3ad3d4be55614c1809900a36e91b 1039 PIRSF PIRSF000197 3 1039 0.0 T 11-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AL543_01105 924f3ad3d4be55614c1809900a36e91b 1039 SUPERFAMILY SSF51730 190 532 9.02E-114 T 11-10-2018 IPR029041 FAD-linked oxidoreductase-like AL543_01105 924f3ad3d4be55614c1809900a36e91b 1039 Pfam PF00171 Aldehyde dehydrogenase family 581 1037 7.1E-120 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AL543_01105 924f3ad3d4be55614c1809900a36e91b 1039 Pfam PF01619 Proline dehydrogenase 197 490 1.3E-92 T 11-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 AL543_01105 924f3ad3d4be55614c1809900a36e91b 1039 Gene3D G3DSA:3.40.605.10 549 1037 4.3E-151 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AL543_01105 924f3ad3d4be55614c1809900a36e91b 1039 Gene3D G3DSA:3.20.20.220 153 525 2.7E-131 T 11-10-2018 AL543_01105 924f3ad3d4be55614c1809900a36e91b 1039 SUPERFAMILY SSF81935 17 189 7.98E-62 T 11-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AL543_06360 2514defce40dec144b3667d5817879ec 296 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 292 7.5E-90 T 11-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 AL543_06360 2514defce40dec144b3667d5817879ec 296 SUPERFAMILY SSF51735 1 165 6.57E-52 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_06360 2514defce40dec144b3667d5817879ec 296 Gene3D G3DSA:3.40.50.720 1 166 7.0E-51 T 11-10-2018 AL543_06360 2514defce40dec144b3667d5817879ec 296 Gene3D G3DSA:1.10.1040.10 167 296 1.2E-43 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL543_06360 2514defce40dec144b3667d5817879ec 296 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 142 4.8E-30 T 11-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain AL543_06360 2514defce40dec144b3667d5817879ec 296 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 168 290 5.2E-38 T 11-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain AL543_06360 2514defce40dec144b3667d5817879ec 296 SUPERFAMILY SSF48179 168 290 3.74E-38 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AL543_12570 0b292c078961c244ee9c2e9ff2df7b9e 599 SUPERFAMILY SSF51735 400 498 3.94E-8 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_12570 0b292c078961c244ee9c2e9ff2df7b9e 599 Pfam PF02254 TrkA-N domain 400 497 1.6E-6 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AL543_12570 0b292c078961c244ee9c2e9ff2df7b9e 599 Gene3D G3DSA:1.20.1530.20 6 390 3.1E-13 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily AL543_12570 0b292c078961c244ee9c2e9ff2df7b9e 599 Pfam PF00999 Sodium/hydrogen exchanger family 14 387 5.0E-30 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AL543_12570 0b292c078961c244ee9c2e9ff2df7b9e 599 Gene3D G3DSA:3.40.50.720 398 512 2.5E-10 T 11-10-2018 AL543_00705 32a659d4d6b121254ab895bb219bd9eb 505 Pfam PF12268 Protein of unknown function (DUF3612) 327 501 2.3E-102 T 11-10-2018 IPR022055 Protein of unknown function DUF3612 AL543_00705 32a659d4d6b121254ab895bb219bd9eb 505 SUPERFAMILY SSF47413 12 86 3.66E-11 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL543_00705 32a659d4d6b121254ab895bb219bd9eb 505 Gene3D G3DSA:1.10.260.40 11 94 9.2E-13 T 11-10-2018 AL543_00705 32a659d4d6b121254ab895bb219bd9eb 505 Pfam PF01381 Helix-turn-helix 46 79 3.4E-6 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL543_00705 32a659d4d6b121254ab895bb219bd9eb 505 SMART SM00530 17 79 7.3E-11 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL543_18965 e5f2d99ab4f67f3808c8ea5f0c3833ab 149 Gene3D G3DSA:3.10.129.10 2 137 3.8E-37 T 11-10-2018 AL543_18965 e5f2d99ab4f67f3808c8ea5f0c3833ab 149 Pfam PF13279 Thioesterase-like superfamily 16 134 1.8E-20 T 11-10-2018 AL543_18965 e5f2d99ab4f67f3808c8ea5f0c3833ab 149 SUPERFAMILY SSF54637 7 138 1.64E-31 T 11-10-2018 IPR029069 HotDog domain superfamily AL543_10925 42554ac878ca9771107822e2a7038499 158 TIGRFAM TIGR00754 bfr: bacterioferritin 1 157 2.1E-85 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AL543_10925 42554ac878ca9771107822e2a7038499 158 PRINTS PR00601 Bacterioferritin signature 86 106 9.0E-73 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AL543_10925 42554ac878ca9771107822e2a7038499 158 PRINTS PR00601 Bacterioferritin signature 23 43 9.0E-73 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AL543_10925 42554ac878ca9771107822e2a7038499 158 PRINTS PR00601 Bacterioferritin signature 65 85 9.0E-73 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AL543_10925 42554ac878ca9771107822e2a7038499 158 PRINTS PR00601 Bacterioferritin signature 107 127 9.0E-73 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AL543_10925 42554ac878ca9771107822e2a7038499 158 PRINTS PR00601 Bacterioferritin signature 128 149 9.0E-73 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AL543_10925 42554ac878ca9771107822e2a7038499 158 PRINTS PR00601 Bacterioferritin signature 44 64 9.0E-73 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AL543_10925 42554ac878ca9771107822e2a7038499 158 PRINTS PR00601 Bacterioferritin signature 3 22 9.0E-73 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AL543_10925 42554ac878ca9771107822e2a7038499 158 Pfam PF00210 Ferritin-like domain 8 143 1.4E-40 T 11-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AL543_10925 42554ac878ca9771107822e2a7038499 158 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AL543_10925 42554ac878ca9771107822e2a7038499 158 PIRSF PIRSF002560 1 157 2.8E-73 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AL543_10925 42554ac878ca9771107822e2a7038499 158 Gene3D G3DSA:1.20.1260.10 1 158 4.3E-73 T 11-10-2018 IPR012347 Ferritin-like AL543_10925 42554ac878ca9771107822e2a7038499 158 SUPERFAMILY SSF47240 1 153 7.32E-56 T 11-10-2018 IPR009078 Ferritin-like superfamily AL543_20310 3e891d91bcda1bcca7312f8c1d39bcf3 262 Pfam PF00460 Flagella basal body rod protein 5 35 4.1E-12 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AL543_20310 3e891d91bcda1bcca7312f8c1d39bcf3 262 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 261 3.0E-117 T 11-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 AL543_20310 3e891d91bcda1bcca7312f8c1d39bcf3 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 147 244 4.5E-30 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G AL543_20310 3e891d91bcda1bcca7312f8c1d39bcf3 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 137 5.4E-40 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G AL543_20310 3e891d91bcda1bcca7312f8c1d39bcf3 262 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 11-10-2018 IPR019776 Flagellar basal body rod protein, conserved site AL543_20310 3e891d91bcda1bcca7312f8c1d39bcf3 262 SUPERFAMILY SSF117143 92 223 5.49E-36 T 11-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like AL543_20310 3e891d91bcda1bcca7312f8c1d39bcf3 262 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 184 260 4.8E-24 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AL543_14975 2bc6a8b7b913e9426c1beda47c2845c7 346 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 206 215 - T 11-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 AL543_14975 2bc6a8b7b913e9426c1beda47c2845c7 346 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 345 53.326 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 AL543_14975 2bc6a8b7b913e9426c1beda47c2845c7 346 SUPERFAMILY SSF53383 11 344 1.13E-73 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL543_14975 2bc6a8b7b913e9426c1beda47c2845c7 346 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 6 343 1.7E-120 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 AL543_14975 2bc6a8b7b913e9426c1beda47c2845c7 346 Pfam PF00155 Aminotransferase class I and II 42 339 1.7E-55 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL543_14975 2bc6a8b7b913e9426c1beda47c2845c7 346 Gene3D G3DSA:3.90.1150.10 4 336 5.3E-122 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL543_14975 2bc6a8b7b913e9426c1beda47c2845c7 346 Gene3D G3DSA:3.40.640.10 49 253 5.3E-122 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL543_06740 aaa3c280421840517b09f013ec4b29e3 269 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 265 8.1E-101 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL543_06740 aaa3c280421840517b09f013ec4b29e3 269 Gene3D G3DSA:3.30.360.10 127 234 3.0E-103 T 11-10-2018 AL543_06740 aaa3c280421840517b09f013ec4b29e3 269 Gene3D G3DSA:3.40.50.720 3 264 3.0E-103 T 11-10-2018 AL543_06740 aaa3c280421840517b09f013ec4b29e3 269 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 150 167 - T 11-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL543_06740 aaa3c280421840517b09f013ec4b29e3 269 SUPERFAMILY SSF51735 1 268 1.5E-52 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_06740 aaa3c280421840517b09f013ec4b29e3 269 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 265 35.791 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL543_06740 aaa3c280421840517b09f013ec4b29e3 269 SUPERFAMILY SSF55347 127 236 2.4E-37 T 11-10-2018 AL543_06740 aaa3c280421840517b09f013ec4b29e3 269 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 2 125 1.6E-41 T 11-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL543_06740 aaa3c280421840517b09f013ec4b29e3 269 PIRSF PIRSF000161 1 268 1.3E-90 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL543_06740 aaa3c280421840517b09f013ec4b29e3 269 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 128 264 2.0E-43 T 11-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL543_02265 a936d308dc93e1ed96afa7fba4d7ee03 713 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 24 698 6.2E-229 T 11-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ AL543_02265 a936d308dc93e1ed96afa7fba4d7ee03 713 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 122 616 4.1E-71 T 11-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AL543_18690 fb9514204989d9f43b9c696f943e4b64 1229 SUPERFAMILY SSF55486 305 679 1.75E-17 T 11-10-2018 AL543_18690 fb9514204989d9f43b9c696f943e4b64 1229 Pfam PF16313 Met-zincin 610 686 1.0E-7 T 11-10-2018 IPR032534 Domain of unknown function DUF4953 AL543_18690 fb9514204989d9f43b9c696f943e4b64 1229 Gene3D G3DSA:3.40.390.10 430 680 8.5E-9 T 11-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 AL543_07115 b36117f0298bc50acbbf2a34a0a2790f 324 Pfam PF01926 50S ribosome-binding GTPase 33 147 3.4E-23 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AL543_07115 b36117f0298bc50acbbf2a34a0a2790f 324 TIGRFAM TIGR00436 era: GTP-binding protein Era 31 303 5.7E-110 T 11-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_07115 b36117f0298bc50acbbf2a34a0a2790f 324 Hamap MF_00367 GTPase Era [era]. 28 320 35.4 T 11-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_07115 b36117f0298bc50acbbf2a34a0a2790f 324 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 30 190 1.0E-37 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL543_07115 b36117f0298bc50acbbf2a34a0a2790f 324 SUPERFAMILY SSF52540 33 228 7.66E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_07115 b36117f0298bc50acbbf2a34a0a2790f 324 Gene3D G3DSA:3.30.300.20 208 322 9.4E-42 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AL543_07115 b36117f0298bc50acbbf2a34a0a2790f 324 Gene3D G3DSA:3.40.50.300 24 206 1.6E-50 T 11-10-2018 AL543_07115 b36117f0298bc50acbbf2a34a0a2790f 324 SUPERFAMILY SSF54814 204 320 1.47E-40 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 AL543_07115 b36117f0298bc50acbbf2a34a0a2790f 324 Pfam PF07650 KH domain 231 308 9.7E-20 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_09090 a3a685d1c40019cc396fe724681b51b0 510 Pfam PF02646 RmuC family 181 477 3.4E-105 T 11-10-2018 IPR003798 DNA recombination RmuC AL543_13915 18d672d06e03aab41d3905e8516637a1 858 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL543_13915 18d672d06e03aab41d3905e8516637a1 858 SUPERFAMILY SSF47323 661 857 1.05E-34 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL543_13915 18d672d06e03aab41d3905e8516637a1 858 Gene3D G3DSA:3.10.330.110 566 627 0.0 T 11-10-2018 AL543_13915 18d672d06e03aab41d3905e8516637a1 858 Pfam PF08264 Anticodon-binding domain of tRNA 700 819 1.3E-15 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 AL543_13915 18d672d06e03aab41d3905e8516637a1 858 SUPERFAMILY SSF50677 226 415 4.29E-59 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AL543_13915 18d672d06e03aab41d3905e8516637a1 858 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 857 0.0 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AL543_13915 18d672d06e03aab41d3905e8516637a1 858 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 857 23.384 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AL543_13915 18d672d06e03aab41d3905e8516637a1 858 Gene3D G3DSA:3.90.740.10 227 414 0.0 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AL543_13915 18d672d06e03aab41d3905e8516637a1 858 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 404 2.0E-79 T 11-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 AL543_13915 18d672d06e03aab41d3905e8516637a1 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 4.3E-52 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AL543_13915 18d672d06e03aab41d3905e8516637a1 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 485 503 4.3E-52 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AL543_13915 18d672d06e03aab41d3905e8516637a1 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 4.3E-52 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AL543_13915 18d672d06e03aab41d3905e8516637a1 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 556 566 4.3E-52 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AL543_13915 18d672d06e03aab41d3905e8516637a1 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 4.3E-52 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AL543_13915 18d672d06e03aab41d3905e8516637a1 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 4.3E-52 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AL543_13915 18d672d06e03aab41d3905e8516637a1 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 523 545 4.3E-52 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AL543_13915 18d672d06e03aab41d3905e8516637a1 858 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 172 4.8E-26 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL543_13915 18d672d06e03aab41d3905e8516637a1 858 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 418 571 8.1E-9 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL543_13915 18d672d06e03aab41d3905e8516637a1 858 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 618 650 1.8E-7 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL543_13915 18d672d06e03aab41d3905e8516637a1 858 Gene3D G3DSA:1.10.730.10 8 789 0.0 T 11-10-2018 AL543_13915 18d672d06e03aab41d3905e8516637a1 858 SUPERFAMILY SSF52374 4 667 7.04E-146 T 11-10-2018 AL543_13915 18d672d06e03aab41d3905e8516637a1 858 Gene3D G3DSA:3.10.20.590 797 857 2.5E-23 T 11-10-2018 AL543_13915 18d672d06e03aab41d3905e8516637a1 858 Gene3D G3DSA:3.40.50.620 33 565 0.0 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL543_07000 e0b22405be9dfc940c7907268c4ff459 505 SUPERFAMILY SSF55154 1 218 1.42E-52 T 11-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 AL543_07000 e0b22405be9dfc940c7907268c4ff459 505 Pfam PF01928 CYTH domain 3 197 6.9E-35 T 11-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 AL543_07000 e0b22405be9dfc940c7907268c4ff459 505 Gene3D G3DSA:2.40.320.10 1 200 1.8E-35 T 11-10-2018 AL543_07000 e0b22405be9dfc940c7907268c4ff459 505 SMART SM00880 229 497 1.2E-24 T 11-10-2018 IPR007899 CHAD domain AL543_07000 e0b22405be9dfc940c7907268c4ff459 505 SMART SM01118 2 203 1.2E-43 T 11-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 AL543_07000 e0b22405be9dfc940c7907268c4ff459 505 Gene3D G3DSA:1.40.20.10 210 410 4.3E-15 T 11-10-2018 IPR038186 CHAD domain superfamily AL543_07000 e0b22405be9dfc940c7907268c4ff459 505 Pfam PF05235 CHAD domain 230 396 1.5E-10 T 11-10-2018 IPR007899 CHAD domain AL543_04075 bdc59eae52d339e387332c6c0233772c 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 374 2.3E-128 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AL543_04075 bdc59eae52d339e387332c6c0233772c 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AL543_04075 bdc59eae52d339e387332c6c0233772c 382 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AL543_04075 bdc59eae52d339e387332c6c0233772c 382 SUPERFAMILY SSF56796 5 381 1.31E-135 T 11-10-2018 AL543_04075 bdc59eae52d339e387332c6c0233772c 382 Gene3D G3DSA:3.40.50.1970 2 183 8.5E-57 T 11-10-2018 AL543_04075 bdc59eae52d339e387332c6c0233772c 382 Gene3D G3DSA:1.20.1090.10 184 382 2.1E-77 T 11-10-2018 AL543_01580 5195892e4a6cd237e5015276c1890f60 452 Gene3D G3DSA:3.40.50.300 1 216 9.0E-73 T 11-10-2018 AL543_01580 5195892e4a6cd237e5015276c1890f60 452 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 156 164 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AL543_01580 5195892e4a6cd237e5015276c1890f60 452 Pfam PF00270 DEAD/DEAH box helicase 29 200 1.6E-46 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL543_01580 5195892e4a6cd237e5015276c1890f60 452 Gene3D G3DSA:3.40.50.300 218 432 3.1E-51 T 11-10-2018 AL543_01580 5195892e4a6cd237e5015276c1890f60 452 Pfam PF00271 Helicase conserved C-terminal domain 241 345 1.1E-29 T 11-10-2018 IPR001650 Helicase, C-terminal AL543_01580 5195892e4a6cd237e5015276c1890f60 452 SMART SM00487 24 227 8.8E-50 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL543_01580 5195892e4a6cd237e5015276c1890f60 452 SUPERFAMILY SSF52540 77 363 2.07E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_01580 5195892e4a6cd237e5015276c1890f60 452 SMART SM00490 264 345 7.0E-32 T 11-10-2018 IPR001650 Helicase, C-terminal AL543_18490 23b473f7d264de679d68df944fcaa967 423 Pfam PF04285 Protein of unknown function (DUF444) 3 421 1.2E-188 T 11-10-2018 IPR006698 Uncharacterised protein family UPF0229 AL543_18490 23b473f7d264de679d68df944fcaa967 423 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 423 40.57 T 11-10-2018 IPR006698 Uncharacterised protein family UPF0229 AL543_03000 9fcfee928e5f9255e132e852a3eecbab 569 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 214 391 2.1E-31 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL543_03000 9fcfee928e5f9255e132e852a3eecbab 569 Gene3D G3DSA:2.40.50.320 494 565 6.0E-13 T 11-10-2018 AL543_03000 9fcfee928e5f9255e132e852a3eecbab 569 Gene3D G3DSA:2.40.50.320 415 485 7.7E-22 T 11-10-2018 AL543_03000 9fcfee928e5f9255e132e852a3eecbab 569 Gene3D G3DSA:2.40.420.20 101 112 6.4E-10 T 11-10-2018 AL543_03000 9fcfee928e5f9255e132e852a3eecbab 569 Gene3D G3DSA:2.40.50.100 127 161 6.4E-10 T 11-10-2018 AL543_03000 9fcfee928e5f9255e132e852a3eecbab 569 Gene3D G3DSA:2.40.50.100 196 245 1.8E-26 T 11-10-2018 AL543_03000 9fcfee928e5f9255e132e852a3eecbab 569 SUPERFAMILY SSF111369 131 323 6.41E-16 T 11-10-2018 AL543_03000 9fcfee928e5f9255e132e852a3eecbab 569 Gene3D G3DSA:1.10.287.470 185 195 1.8E-26 T 11-10-2018 AL543_03000 9fcfee928e5f9255e132e852a3eecbab 569 Gene3D G3DSA:1.10.287.470 162 174 6.4E-10 T 11-10-2018 AL543_03000 9fcfee928e5f9255e132e852a3eecbab 569 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 110 318 1.1E-77 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL543_03000 9fcfee928e5f9255e132e852a3eecbab 569 Gene3D G3DSA:2.40.30.170 246 319 1.8E-26 T 11-10-2018 AL543_03000 9fcfee928e5f9255e132e852a3eecbab 569 Pfam PF11604 Copper binding periplasmic protein CusF 418 484 3.8E-24 T 11-10-2018 IPR021647 Copper binding periplasmic protein CusF AL543_03000 9fcfee928e5f9255e132e852a3eecbab 569 Pfam PF11604 Copper binding periplasmic protein CusF 498 563 1.2E-15 T 11-10-2018 IPR021647 Copper binding periplasmic protein CusF AL543_03000 9fcfee928e5f9255e132e852a3eecbab 569 Gene3D G3DSA:2.40.30.170 113 126 6.4E-10 T 11-10-2018 AL543_03000 9fcfee928e5f9255e132e852a3eecbab 569 Gene3D G3DSA:2.40.420.20 325 414 2.0E-22 T 11-10-2018 AL543_03970 540d0096788289427a196f27d512401e 173 Gene3D G3DSA:3.40.630.30 22 150 5.3E-18 T 11-10-2018 AL543_03970 540d0096788289427a196f27d512401e 173 SUPERFAMILY SSF55729 3 161 1.03E-19 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL543_03970 540d0096788289427a196f27d512401e 173 Pfam PF13302 Acetyltransferase (GNAT) domain 4 148 2.0E-9 T 11-10-2018 IPR000182 GNAT domain AL543_01790 dcf75a3c42f9e293a2d9e590b6dbc32c 487 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 26 188 6.2E-52 T 11-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 AL543_01790 dcf75a3c42f9e293a2d9e590b6dbc32c 487 SUPERFAMILY SSF51735 4 281 8.27E-99 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_01790 dcf75a3c42f9e293a2d9e590b6dbc32c 487 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 218 230 - T 11-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AL543_01790 dcf75a3c42f9e293a2d9e590b6dbc32c 487 Gene3D G3DSA:1.10.1040.10 282 487 3.1E-73 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL543_01790 dcf75a3c42f9e293a2d9e590b6dbc32c 487 SUPERFAMILY SSF48179 283 486 1.8E-64 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AL543_01790 dcf75a3c42f9e293a2d9e590b6dbc32c 487 Gene3D G3DSA:3.40.50.720 7 281 1.3E-109 T 11-10-2018 AL543_01790 dcf75a3c42f9e293a2d9e590b6dbc32c 487 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 217 463 3.2E-89 T 11-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 AL543_01790 dcf75a3c42f9e293a2d9e590b6dbc32c 487 PRINTS PR00084 Mannitol dehydrogenase signature 248 263 4.3E-21 T 11-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AL543_01790 dcf75a3c42f9e293a2d9e590b6dbc32c 487 PRINTS PR00084 Mannitol dehydrogenase signature 179 192 4.3E-21 T 11-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AL543_01790 dcf75a3c42f9e293a2d9e590b6dbc32c 487 PRINTS PR00084 Mannitol dehydrogenase signature 218 231 4.3E-21 T 11-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AL543_01790 dcf75a3c42f9e293a2d9e590b6dbc32c 487 PRINTS PR00084 Mannitol dehydrogenase signature 27 37 4.3E-21 T 11-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AL543_13345 0e76a165c4d6b9e855630bcb3b4acd3d 934 Pfam PF00271 Helicase conserved C-terminal domain 463 570 2.6E-21 T 11-10-2018 IPR001650 Helicase, C-terminal AL543_13345 0e76a165c4d6b9e855630bcb3b4acd3d 934 SUPERFAMILY SSF52540 87 311 1.81E-34 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_13345 0e76a165c4d6b9e855630bcb3b4acd3d 934 SMART SM00490 490 570 8.9E-24 T 11-10-2018 IPR001650 Helicase, C-terminal AL543_13345 0e76a165c4d6b9e855630bcb3b4acd3d 934 SMART SM00487 90 306 5.2E-22 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL543_13345 0e76a165c4d6b9e855630bcb3b4acd3d 934 SUPERFAMILY SSF52540 227 606 1.88E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_13345 0e76a165c4d6b9e855630bcb3b4acd3d 934 Gene3D G3DSA:3.40.50.10810 91 367 9.8E-64 T 11-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily AL543_13345 0e76a165c4d6b9e855630bcb3b4acd3d 934 Pfam PF00176 SNF2 family N-terminal domain 114 298 2.4E-15 T 11-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 AL543_13345 0e76a165c4d6b9e855630bcb3b4acd3d 934 Gene3D G3DSA:3.40.50.300 402 601 9.5E-47 T 11-10-2018 AL543_14160 8c2b8529d5a78c4fe77cf4a4c800d88d 294 Gene3D G3DSA:3.30.1330.60 176 294 2.9E-35 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL543_14160 8c2b8529d5a78c4fe77cf4a4c800d88d 294 Pfam PF00691 OmpA family 191 283 1.1E-16 T 11-10-2018 IPR006665 OmpA-like domain AL543_14160 8c2b8529d5a78c4fe77cf4a4c800d88d 294 Gene3D G3DSA:2.60.40.2540 22 175 2.8E-57 T 11-10-2018 AL543_14160 8c2b8529d5a78c4fe77cf4a4c800d88d 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 3 27 6.6E-129 T 11-10-2018 AL543_14160 8c2b8529d5a78c4fe77cf4a4c800d88d 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 85 103 6.6E-129 T 11-10-2018 AL543_14160 8c2b8529d5a78c4fe77cf4a4c800d88d 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 148 167 6.6E-129 T 11-10-2018 AL543_14160 8c2b8529d5a78c4fe77cf4a4c800d88d 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 104 121 6.6E-129 T 11-10-2018 AL543_14160 8c2b8529d5a78c4fe77cf4a4c800d88d 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 45 63 6.6E-129 T 11-10-2018 AL543_14160 8c2b8529d5a78c4fe77cf4a4c800d88d 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 66 84 6.6E-129 T 11-10-2018 AL543_14160 8c2b8529d5a78c4fe77cf4a4c800d88d 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 28 44 6.6E-129 T 11-10-2018 AL543_14160 8c2b8529d5a78c4fe77cf4a4c800d88d 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 252 271 6.6E-129 T 11-10-2018 AL543_14160 8c2b8529d5a78c4fe77cf4a4c800d88d 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 272 292 6.6E-129 T 11-10-2018 AL543_14160 8c2b8529d5a78c4fe77cf4a4c800d88d 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 234 251 6.6E-129 T 11-10-2018 AL543_14160 8c2b8529d5a78c4fe77cf4a4c800d88d 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 123 145 6.6E-129 T 11-10-2018 AL543_14160 8c2b8529d5a78c4fe77cf4a4c800d88d 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 205 231 6.6E-129 T 11-10-2018 AL543_14160 8c2b8529d5a78c4fe77cf4a4c800d88d 294 SUPERFAMILY SSF103088 158 288 9.16E-25 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL543_12340 034927469ae3ace889faaa2408f60dde 898 SUPERFAMILY SSF46955 3 50 1.68E-12 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AL543_12340 034927469ae3ace889faaa2408f60dde 898 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 895 17.68 T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AL543_12340 034927469ae3ace889faaa2408f60dde 898 Gene3D G3DSA:2.40.30.10 799 896 4.6E-34 T 11-10-2018 AL543_12340 034927469ae3ace889faaa2408f60dde 898 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 400 555 1.5E-32 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL543_12340 034927469ae3ace889faaa2408f60dde 898 SUPERFAMILY SSF50447 799 895 1.96E-34 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AL543_12340 034927469ae3ace889faaa2408f60dde 898 Gene3D G3DSA:3.40.50.300 395 568 5.1E-70 T 11-10-2018 AL543_12340 034927469ae3ace889faaa2408f60dde 898 SUPERFAMILY SSF52156 675 804 6.8E-39 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily AL543_12340 034927469ae3ace889faaa2408f60dde 898 Gene3D G3DSA:3.40.50.10050 692 798 4.3E-39 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily AL543_12340 034927469ae3ace889faaa2408f60dde 898 SUPERFAMILY SSF50447 571 652 1.27E-24 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AL543_12340 034927469ae3ace889faaa2408f60dde 898 Pfam PF00009 Elongation factor Tu GTP binding domain 401 558 4.9E-32 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL543_12340 034927469ae3ace889faaa2408f60dde 898 ProSitePatterns PS01176 Initiation factor 2 signature. 848 870 - T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AL543_12340 034927469ae3ace889faaa2408f60dde 898 Gene3D G3DSA:3.30.56.50 2 50 1.7E-24 T 11-10-2018 AL543_12340 034927469ae3ace889faaa2408f60dde 898 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 315 897 3.8E-285 T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AL543_12340 034927469ae3ace889faaa2408f60dde 898 Pfam PF11987 Translation-initiation factor 2 682 787 1.3E-37 T 11-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 AL543_12340 034927469ae3ace889faaa2408f60dde 898 SUPERFAMILY SSF52540 391 565 4.86E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_12340 034927469ae3ace889faaa2408f60dde 898 Gene3D G3DSA:2.40.30.10 569 687 4.3E-41 T 11-10-2018 AL543_12340 034927469ae3ace889faaa2408f60dde 898 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 61 99 1.5E-15 T 11-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial AL543_12340 034927469ae3ace889faaa2408f60dde 898 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 323 372 1.3E-14 T 11-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal AL543_12340 034927469ae3ace889faaa2408f60dde 898 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 50 1.8E-7 T 11-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal AL543_07655 28bba512ee19b7bdb2e29100bd4085f9 215 SUPERFAMILY SSF52540 34 209 4.09E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_07655 28bba512ee19b7bdb2e29100bd4085f9 215 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 21 204 3.4E-83 T 11-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 AL543_07655 28bba512ee19b7bdb2e29100bd4085f9 215 Pfam PF01583 Adenylylsulphate kinase 38 191 9.5E-72 T 11-10-2018 AL543_07655 28bba512ee19b7bdb2e29100bd4085f9 215 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 37 209 38.289 T 11-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 AL543_07655 28bba512ee19b7bdb2e29100bd4085f9 215 Gene3D G3DSA:3.40.50.300 16 215 2.3E-80 T 11-10-2018 AL543_08380 9ee5711ae05b839588ffb6de0969d0f0 478 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 375 395 - T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AL543_08380 9ee5711ae05b839588ffb6de0969d0f0 478 TIGRFAM TIGR03173 pbuX: xanthine permease 40 459 4.1E-131 T 11-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 AL543_08380 9ee5711ae05b839588ffb6de0969d0f0 478 Pfam PF00860 Permease family 35 427 5.3E-98 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 AL543_08380 9ee5711ae05b839588ffb6de0969d0f0 478 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 30 457 1.1E-126 T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AL543_01645 b67849bd322096e76717570dfb558f50 295 Pfam PF03466 LysR substrate binding domain 88 289 2.9E-32 T 11-10-2018 IPR005119 LysR, substrate-binding AL543_01645 b67849bd322096e76717570dfb558f50 295 SUPERFAMILY SSF46785 8 88 2.18E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_01645 b67849bd322096e76717570dfb558f50 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 3.0E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_01645 b67849bd322096e76717570dfb558f50 295 Gene3D G3DSA:3.40.190.10 92 286 5.4E-44 T 11-10-2018 AL543_01645 b67849bd322096e76717570dfb558f50 295 Gene3D G3DSA:1.10.10.10 3 91 6.0E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_01645 b67849bd322096e76717570dfb558f50 295 SUPERFAMILY SSF53850 90 292 8.69E-35 T 11-10-2018 AL543_01645 b67849bd322096e76717570dfb558f50 295 Gene3D G3DSA:3.40.190.10 164 261 5.4E-44 T 11-10-2018 AL543_13765 f9abcca0cfc5c5499f1a9a2135a075dc 143 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 53 75 4.0E-4 T 11-10-2018 IPR001451 Hexapeptide repeat AL543_13765 f9abcca0cfc5c5499f1a9a2135a075dc 143 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 83 115 1.1E-8 T 11-10-2018 IPR001451 Hexapeptide repeat AL543_13765 f9abcca0cfc5c5499f1a9a2135a075dc 143 SUPERFAMILY SSF51161 2 134 8.46E-32 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AL543_13765 f9abcca0cfc5c5499f1a9a2135a075dc 143 PIRSF PIRSF000441 1 142 7.4E-41 T 11-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 AL543_13765 f9abcca0cfc5c5499f1a9a2135a075dc 143 Gene3D G3DSA:2.160.10.10 33 140 5.3E-30 T 11-10-2018 AL543_13765 f9abcca0cfc5c5499f1a9a2135a075dc 143 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 91 119 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AL543_16160 44f349c872ef5f4c5ea8dd0a55cd87b5 342 SMART SM00062 38 267 3.4E-55 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL543_16160 44f349c872ef5f4c5ea8dd0a55cd87b5 342 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 257 1.1E-29 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL543_16160 44f349c872ef5f4c5ea8dd0a55cd87b5 342 SUPERFAMILY SSF53850 29 261 1.79E-49 T 11-10-2018 AL543_16160 44f349c872ef5f4c5ea8dd0a55cd87b5 342 Gene3D G3DSA:3.40.190.10 33 244 2.3E-50 T 11-10-2018 AL543_16160 44f349c872ef5f4c5ea8dd0a55cd87b5 342 Gene3D G3DSA:3.40.190.10 125 230 2.3E-50 T 11-10-2018 AL543_14330 54cc1a2fa5d5b05b1428b2e6e364bb60 433 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 17 433 3.6E-140 T 11-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) AL543_14330 54cc1a2fa5d5b05b1428b2e6e364bb60 433 SUPERFAMILY SSF56935 26 433 2.93E-99 T 11-10-2018 AL543_14330 54cc1a2fa5d5b05b1428b2e6e364bb60 433 Gene3D G3DSA:2.40.160.60 26 433 2.4E-120 T 11-10-2018 AL543_01655 252820a2af0c654526ba1595c97ba838 148 ProSitePatterns PS00552 MerR-type HTH domain signature. 6 28 - T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL543_01655 252820a2af0c654526ba1595c97ba838 148 Gene3D G3DSA:1.10.1660.10 1 126 1.0E-31 T 11-10-2018 AL543_01655 252820a2af0c654526ba1595c97ba838 148 Pfam PF13411 MerR HTH family regulatory protein 3 69 1.1E-15 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL543_01655 252820a2af0c654526ba1595c97ba838 148 SUPERFAMILY SSF46955 3 125 1.32E-27 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AL543_01655 252820a2af0c654526ba1595c97ba838 148 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 1.9E-13 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL543_01655 252820a2af0c654526ba1595c97ba838 148 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 1.9E-13 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL543_01655 252820a2af0c654526ba1595c97ba838 148 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 1.9E-13 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL543_01655 252820a2af0c654526ba1595c97ba838 148 SMART SM00422 3 71 2.4E-23 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL543_01655 252820a2af0c654526ba1595c97ba838 148 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 2 142 2.7E-70 T 11-10-2018 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 AL543_19300 60f3f6681594bfabe5d533e318f95d26 95 Pfam PF03992 Antibiotic biosynthesis monooxygenase 2 76 1.6E-16 T 11-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AL543_19300 60f3f6681594bfabe5d533e318f95d26 95 Gene3D G3DSA:3.30.70.100 1 95 1.3E-29 T 11-10-2018 AL543_19300 60f3f6681594bfabe5d533e318f95d26 95 SUPERFAMILY SSF54909 2 94 7.51E-27 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AL543_02805 51898a5479841aa34ebee62c86c58131 743 SUPERFAMILY SSF50370 488 591 4.3E-14 T 11-10-2018 IPR035992 Ricin B-like lectins AL543_02805 51898a5479841aa34ebee62c86c58131 743 SMART SM00458 486 601 5.1E-14 T 11-10-2018 IPR000772 Ricin B, lectin domain AL543_02805 51898a5479841aa34ebee62c86c58131 743 Gene3D G3DSA:2.100.10.30 609 743 1.5E-38 T 11-10-2018 IPR036404 Jacalin-like lectin domain superfamily AL543_02805 51898a5479841aa34ebee62c86c58131 743 Pfam PF07968 Leukocidin/Hemolysin toxin family 217 479 7.9E-75 T 11-10-2018 IPR016183 Leukocidin/Hemolysin toxin GO:0005576|GO:0051715 AL543_02805 51898a5479841aa34ebee62c86c58131 743 Gene3D G3DSA:2.70.240.20 167 587 1.9E-197 T 11-10-2018 AL543_02805 51898a5479841aa34ebee62c86c58131 743 Gene3D G3DSA:3.30.70.2270 304 351 1.9E-197 T 11-10-2018 AL543_02805 51898a5479841aa34ebee62c86c58131 743 Gene3D G3DSA:3.30.110.130 46 130 1.5E-32 T 11-10-2018 AL543_02805 51898a5479841aa34ebee62c86c58131 743 Pfam PF12563 Hemolytic toxin N terminal 5 189 5.8E-77 T 11-10-2018 IPR022220 Hemolytic toxin, N-terminal AL543_02805 51898a5479841aa34ebee62c86c58131 743 SUPERFAMILY SSF56959 279 479 1.64E-6 T 11-10-2018 IPR036435 Leukocidin/porin MspA superfamily AL543_02805 51898a5479841aa34ebee62c86c58131 743 Pfam PF16458 Beta-prism lectin 614 741 1.7E-50 T 11-10-2018 IPR032496 Hemolysin, beta-prism lectin AL543_09290 2aa2620c8299caeed162bfe6492fe7a4 402 Pfam PF00589 Phage integrase family 235 375 2.5E-16 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL543_09290 2aa2620c8299caeed162bfe6492fe7a4 402 Gene3D G3DSA:1.10.443.10 220 389 3.7E-16 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AL543_09290 2aa2620c8299caeed162bfe6492fe7a4 402 SUPERFAMILY SSF56349 100 388 1.15E-48 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL543_09290 2aa2620c8299caeed162bfe6492fe7a4 402 Gene3D G3DSA:1.10.150.130 105 183 1.0E-28 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AL543_09290 2aa2620c8299caeed162bfe6492fe7a4 402 Gene3D G3DSA:3.30.160.390 1 104 4.2E-16 T 11-10-2018 IPR038488 Integrase, DNA-binding domain superfamily AL543_09290 2aa2620c8299caeed162bfe6492fe7a4 402 Pfam PF13356 Arm DNA-binding domain 4 92 2.1E-11 T 11-10-2018 IPR025166 Integrase, DNA-binding domain AL543_11640 58383f2c46cfcba9a96ba2cf77b626f4 287 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 149 183 - T 11-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 AL543_11640 58383f2c46cfcba9a96ba2cf77b626f4 287 Gene3D G3DSA:2.30.30.60 135 184 1.9E-21 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily AL543_11640 58383f2c46cfcba9a96ba2cf77b626f4 287 SUPERFAMILY SSF50182 120 185 3.6E-17 T 11-10-2018 IPR010920 LSM domain superfamily AL543_11640 58383f2c46cfcba9a96ba2cf77b626f4 287 Pfam PF00924 Mechanosensitive ion channel 77 274 6.9E-59 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AL543_11640 58383f2c46cfcba9a96ba2cf77b626f4 287 SUPERFAMILY SSF82861 33 118 3.01E-17 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AL543_11640 58383f2c46cfcba9a96ba2cf77b626f4 287 Gene3D G3DSA:3.30.70.100 185 279 2.5E-30 T 11-10-2018 AL543_11640 58383f2c46cfcba9a96ba2cf77b626f4 287 Pfam PF05552 Conserved TM helix 21 69 1.0E-11 T 11-10-2018 IPR008910 Conserved TM helix AL543_11640 58383f2c46cfcba9a96ba2cf77b626f4 287 SUPERFAMILY SSF82689 186 284 3.66E-35 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AL543_02855 72fc9fb4d8fb567fed53fb8d9f0db759 665 SUPERFAMILY SSF56935 38 665 4.33E-82 T 11-10-2018 AL543_02855 72fc9fb4d8fb567fed53fb8d9f0db759 665 Gene3D G3DSA:2.40.170.20 153 665 2.0E-99 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AL543_02855 72fc9fb4d8fb567fed53fb8d9f0db759 665 Pfam PF00593 TonB dependent receptor 238 663 7.7E-37 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AL543_02855 72fc9fb4d8fb567fed53fb8d9f0db759 665 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 48 665 2.0E-121 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AL543_02855 72fc9fb4d8fb567fed53fb8d9f0db759 665 Gene3D G3DSA:2.170.130.10 44 151 3.4E-31 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AL543_02855 72fc9fb4d8fb567fed53fb8d9f0db759 665 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 648 665 - T 11-10-2018 IPR010917 TonB-dependent receptor, conserved site AL543_02855 72fc9fb4d8fb567fed53fb8d9f0db759 665 Pfam PF07715 TonB-dependent Receptor Plug Domain 47 140 7.9E-14 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AL543_10050 4b4e9dfbeda1c0c327c4d5e69a2f664e 723 Gene3D G3DSA:1.10.486.10 382 538 3.6E-132 T 11-10-2018 AL543_10050 4b4e9dfbeda1c0c327c4d5e69a2f664e 723 Pfam PF13361 UvrD-like helicase C-terminal domain 277 616 3.2E-79 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AL543_10050 4b4e9dfbeda1c0c327c4d5e69a2f664e 723 Gene3D G3DSA:3.40.50.300 11 273 1.8E-99 T 11-10-2018 AL543_10050 4b4e9dfbeda1c0c327c4d5e69a2f664e 723 Gene3D G3DSA:1.10.10.160 115 187 1.8E-99 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily AL543_10050 4b4e9dfbeda1c0c327c4d5e69a2f664e 723 Pfam PF00580 UvrD/REP helicase N-terminal domain 11 271 2.0E-76 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AL543_10050 4b4e9dfbeda1c0c327c4d5e69a2f664e 723 TIGRFAM TIGR01075 uvrD: DNA helicase II 7 721 0.0 T 11-10-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 AL543_10050 4b4e9dfbeda1c0c327c4d5e69a2f664e 723 SUPERFAMILY SSF52540 8 642 4.6E-182 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_10050 4b4e9dfbeda1c0c327c4d5e69a2f664e 723 Gene3D G3DSA:3.40.50.300 281 636 3.6E-132 T 11-10-2018 AL543_01765 2ac686a8bb72c0faf6866d7d14ecab1f 314 Gene3D G3DSA:3.40.190.10 92 299 5.1E-67 T 11-10-2018 AL543_01765 2ac686a8bb72c0faf6866d7d14ecab1f 314 Gene3D G3DSA:1.10.10.10 3 91 3.4E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_01765 2ac686a8bb72c0faf6866d7d14ecab1f 314 SUPERFAMILY SSF53850 89 302 9.65E-40 T 11-10-2018 AL543_01765 2ac686a8bb72c0faf6866d7d14ecab1f 314 Pfam PF03466 LysR substrate binding domain 88 301 1.3E-45 T 11-10-2018 IPR005119 LysR, substrate-binding AL543_01765 2ac686a8bb72c0faf6866d7d14ecab1f 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 1.8E-14 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_01765 2ac686a8bb72c0faf6866d7d14ecab1f 314 SUPERFAMILY SSF46785 5 85 1.09E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_01765 2ac686a8bb72c0faf6866d7d14ecab1f 314 Gene3D G3DSA:3.40.190.10 163 272 5.1E-67 T 11-10-2018 AL543_04425 988117a91087f0d99ae0aa43d095541a 512 SUPERFAMILY SSF51735 137 314 3.7E-35 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_04425 988117a91087f0d99ae0aa43d095541a 512 PIRSF PIRSF000203 1 511 3.5E-272 T 11-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AL543_04425 988117a91087f0d99ae0aa43d095541a 512 Gene3D G3DSA:3.40.50.720 137 318 3.3E-159 T 11-10-2018 AL543_04425 988117a91087f0d99ae0aa43d095541a 512 Gene3D G3DSA:3.40.50.720 3 365 3.3E-159 T 11-10-2018 AL543_04425 988117a91087f0d99ae0aa43d095541a 512 SMART SM01003 4 137 9.6E-73 T 11-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AL543_04425 988117a91087f0d99ae0aa43d095541a 512 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 428 511 2.7E-36 T 11-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AL543_04425 988117a91087f0d99ae0aa43d095541a 512 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 11-10-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 AL543_04425 988117a91087f0d99ae0aa43d095541a 512 SUPERFAMILY SSF52283 1 168 4.68E-55 T 11-10-2018 AL543_04425 988117a91087f0d99ae0aa43d095541a 512 SMART SM01002 146 311 2.2E-80 T 11-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AL543_04425 988117a91087f0d99ae0aa43d095541a 512 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 2 512 1.4E-275 T 11-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AL543_04425 988117a91087f0d99ae0aa43d095541a 512 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 7.8E-49 T 11-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AL543_04425 988117a91087f0d99ae0aa43d095541a 512 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 368 8.0E-74 T 11-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AL543_00595 22901ed14ffd76037782ae4da41448af 253 SMART SM01134 72 234 1.5E-69 T 11-10-2018 AL543_00595 22901ed14ffd76037782ae4da41448af 253 Pfam PF00455 DeoR C terminal sensor domain 75 233 2.2E-53 T 11-10-2018 IPR014036 DeoR C-terminal sensor domain AL543_00595 22901ed14ffd76037782ae4da41448af 253 SUPERFAMILY SSF46785 5 69 2.25E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_00595 22901ed14ffd76037782ae4da41448af 253 Gene3D G3DSA:1.10.10.10 1 69 2.8E-8 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_00595 22901ed14ffd76037782ae4da41448af 253 SUPERFAMILY SSF100950 74 234 3.62E-28 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AL543_00595 22901ed14ffd76037782ae4da41448af 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 11-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AL543_00595 22901ed14ffd76037782ae4da41448af 253 SMART SM00420 6 58 8.6E-27 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL543_00595 22901ed14ffd76037782ae4da41448af 253 Gene3D G3DSA:3.30.750.70 70 133 6.9E-7 T 11-10-2018 AL543_00595 22901ed14ffd76037782ae4da41448af 253 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 5.9E-24 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL543_00595 22901ed14ffd76037782ae4da41448af 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.2E-12 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL543_00595 22901ed14ffd76037782ae4da41448af 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.2E-12 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL543_18970 d35d49abcf9f1b5cfb5bda42dbbcc1d4 169 SUPERFAMILY SSF48317 14 142 1.83E-26 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AL543_18970 d35d49abcf9f1b5cfb5bda42dbbcc1d4 169 SMART SM00014 43 143 1.3E-6 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL543_18970 d35d49abcf9f1b5cfb5bda42dbbcc1d4 169 Pfam PF01569 PAP2 superfamily 73 143 7.9E-13 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL543_18970 d35d49abcf9f1b5cfb5bda42dbbcc1d4 169 Gene3D G3DSA:1.20.144.10 73 151 6.5E-15 T 11-10-2018 AL543_03030 a895cbb47f439059e820a95786f45afc 516 Gene3D G3DSA:3.40.50.620 8 231 1.4E-95 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL543_03030 a895cbb47f439059e820a95786f45afc 516 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 7 223 6.5E-63 T 11-10-2018 IPR007357 Deoxyribodipyrimidine photolyase-related protein AL543_03030 a895cbb47f439059e820a95786f45afc 516 Gene3D G3DSA:1.10.579.10 329 449 1.5E-53 T 11-10-2018 AL543_03030 a895cbb47f439059e820a95786f45afc 516 SUPERFAMILY SSF48173 230 502 1.96E-64 T 11-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 AL543_03030 a895cbb47f439059e820a95786f45afc 516 Gene3D G3DSA:1.25.40.80 132 325 1.4E-95 T 11-10-2018 AL543_03030 a895cbb47f439059e820a95786f45afc 516 Gene3D G3DSA:1.10.10.1710 450 515 1.3E-26 T 11-10-2018 AL543_18720 5889f7747e964572d097c0c870bbf848 340 SUPERFAMILY SSF161098 107 320 5.63E-15 T 11-10-2018 IPR035906 MetI-like superfamily AL543_18720 5889f7747e964572d097c0c870bbf848 340 Gene3D G3DSA:1.10.3720.10 101 330 8.3E-18 T 11-10-2018 IPR035906 MetI-like superfamily AL543_18720 5889f7747e964572d097c0c870bbf848 340 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 131 337 3.4E-32 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL543_04905 7cb63bcc8dc054a9049887d26b0f2c5f 402 SUPERFAMILY SSF53098 1 381 6.6E-68 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_04905 7cb63bcc8dc054a9049887d26b0f2c5f 402 Pfam PF01609 Transposase DDE domain 90 322 7.2E-24 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AL543_16020 6bf48965e6131627b3d2de4bd9ad79c7 323 Gene3D G3DSA:3.40.190.10 123 249 4.6E-63 T 11-10-2018 AL543_16020 6bf48965e6131627b3d2de4bd9ad79c7 323 Gene3D G3DSA:3.40.190.150 29 314 4.6E-63 T 11-10-2018 AL543_16020 6bf48965e6131627b3d2de4bd9ad79c7 323 SUPERFAMILY SSF53850 107 290 2.42E-10 T 11-10-2018 AL543_16020 6bf48965e6131627b3d2de4bd9ad79c7 323 PIRSF PIRSF017082 4 323 1.5E-85 T 11-10-2018 IPR005064 Bordetella uptake gene GO:0030288 AL543_16020 6bf48965e6131627b3d2de4bd9ad79c7 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 70 320 6.4E-23 T 11-10-2018 IPR005064 Bordetella uptake gene GO:0030288 AL543_14550 789f74fb85618e70cea2fc094b5c81a8 84 Gene3D G3DSA:1.10.1200.10 1 83 2.6E-19 T 11-10-2018 IPR036736 ACP-like superfamily AL543_14550 789f74fb85618e70cea2fc094b5c81a8 84 SUPERFAMILY SSF47336 5 79 1.31E-10 T 11-10-2018 IPR036736 ACP-like superfamily AL543_14550 789f74fb85618e70cea2fc094b5c81a8 84 Pfam PF00550 Phosphopantetheine attachment site 6 76 5.8E-5 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain AL543_04030 d40c97246cd3f2e339be7c8e93de71c5 431 SMART SM00636 24 417 2.2E-108 T 11-10-2018 IPR011583 Chitinase II GO:0008061 AL543_04030 d40c97246cd3f2e339be7c8e93de71c5 431 Gene3D G3DSA:3.10.50.10 313 391 6.6E-119 T 11-10-2018 IPR029070 Chitinase insertion domain superfamily AL543_04030 d40c97246cd3f2e339be7c8e93de71c5 431 Pfam PF00704 Glycosyl hydrolases family 18 26 417 5.2E-79 T 11-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 AL543_04030 d40c97246cd3f2e339be7c8e93de71c5 431 SUPERFAMILY SSF54556 314 388 1.15E-17 T 11-10-2018 IPR029070 Chitinase insertion domain superfamily AL543_04030 d40c97246cd3f2e339be7c8e93de71c5 431 SUPERFAMILY SSF51445 16 419 1.51E-78 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AL543_04030 d40c97246cd3f2e339be7c8e93de71c5 431 ProSitePatterns PS01095 Chitinases family 18 active site. 170 178 - T 11-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AL543_04030 d40c97246cd3f2e339be7c8e93de71c5 431 Gene3D G3DSA:3.20.20.80 25 422 6.6E-119 T 11-10-2018 AL543_16345 836fc66604adecf9c82b2ff81f2e5dab 272 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 233 248 4.1E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL543_16345 836fc66604adecf9c82b2ff81f2e5dab 272 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 248 264 4.1E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL543_16345 836fc66604adecf9c82b2ff81f2e5dab 272 Pfam PF12833 Helix-turn-helix domain 187 264 1.9E-19 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL543_16345 836fc66604adecf9c82b2ff81f2e5dab 272 SUPERFAMILY SSF46689 217 264 2.69E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_16345 836fc66604adecf9c82b2ff81f2e5dab 272 Gene3D G3DSA:1.10.10.60 146 267 1.3E-22 T 11-10-2018 AL543_16345 836fc66604adecf9c82b2ff81f2e5dab 272 SMART SM00342 180 264 1.5E-18 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL543_12405 cc16b8380250991e8c0d9b7ff4b72085 135 Pfam PF03603 DNA polymerase III psi subunit 4 128 4.2E-33 T 11-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL543_12405 cc16b8380250991e8c0d9b7ff4b72085 135 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 39 127 1.0E-4 T 11-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL543_12405 cc16b8380250991e8c0d9b7ff4b72085 135 PIRSF PIRSF029225 1 133 3.0E-44 T 11-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL543_12405 cc16b8380250991e8c0d9b7ff4b72085 135 Gene3D G3DSA:3.40.50.10220 34 134 2.8E-27 T 11-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL543_12405 cc16b8380250991e8c0d9b7ff4b72085 135 SUPERFAMILY SSF102220 30 132 5.23E-29 T 11-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL543_14540 85ecfd10e4058c40da514eca2a98cb39 142 Pfam PF12802 MarR family 30 91 5.5E-12 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL543_14540 85ecfd10e4058c40da514eca2a98cb39 142 SMART SM00347 25 127 1.0E-17 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL543_14540 85ecfd10e4058c40da514eca2a98cb39 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 51 67 2.1E-8 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL543_14540 85ecfd10e4058c40da514eca2a98cb39 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 83 2.1E-8 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL543_14540 85ecfd10e4058c40da514eca2a98cb39 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 103 2.1E-8 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL543_14540 85ecfd10e4058c40da514eca2a98cb39 142 SUPERFAMILY SSF46785 8 126 5.65E-24 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_14540 85ecfd10e4058c40da514eca2a98cb39 142 Gene3D G3DSA:1.10.10.10 3 142 3.8E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_07730 a7cce014599a851da5a362b0f6ba5fe0 129 SUPERFAMILY SSF53137 14 129 6.54E-48 T 11-10-2018 AL543_07730 a7cce014599a851da5a362b0f6ba5fe0 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 32.665 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AL543_07730 a7cce014599a851da5a362b0f6ba5fe0 129 Pfam PF00411 Ribosomal protein S11 19 128 1.5E-52 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AL543_07730 a7cce014599a851da5a362b0f6ba5fe0 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 4.2E-55 T 11-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_07730 a7cce014599a851da5a362b0f6ba5fe0 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 11-10-2018 IPR018102 Ribosomal S11, conserved site AL543_07730 a7cce014599a851da5a362b0f6ba5fe0 129 PIRSF PIRSF002131 1 129 2.1E-52 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AL543_07730 a7cce014599a851da5a362b0f6ba5fe0 129 Gene3D G3DSA:3.30.420.80 1 129 3.3E-57 T 11-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 AL543_16120 198d9fa583a6d1ce7eb186156f81998a 397 Gene3D G3DSA:3.30.750.80 72 180 1.3E-36 T 11-10-2018 AL543_16120 198d9fa583a6d1ce7eb186156f81998a 397 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 1 397 68.263 T 11-10-2018 IPR023542 rRNA large subunit methyltransferase I GO:0008649 AL543_16120 198d9fa583a6d1ce7eb186156f81998a 397 SUPERFAMILY SSF88697 3 71 5.59E-17 T 11-10-2018 IPR015947 PUA-like superfamily AL543_16120 198d9fa583a6d1ce7eb186156f81998a 397 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 110 376 6.5E-30 T 11-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 AL543_16120 198d9fa583a6d1ce7eb186156f81998a 397 Gene3D G3DSA:3.40.50.150 181 397 2.5E-68 T 11-10-2018 AL543_16120 198d9fa583a6d1ce7eb186156f81998a 397 Gene3D G3DSA:2.30.130.10 2 71 4.2E-27 T 11-10-2018 IPR036974 PUA domain superfamily GO:0003723 AL543_16120 198d9fa583a6d1ce7eb186156f81998a 397 SUPERFAMILY SSF53335 78 393 5.79E-70 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL543_16120 198d9fa583a6d1ce7eb186156f81998a 397 SMART SM00359 3 87 4.7E-7 T 11-10-2018 IPR002478 PUA domain GO:0003723 AL543_09695 809b9826252b0e1bc80cc368477526c4 328 Pfam PF01636 Phosphotransferase enzyme family 35 256 1.7E-41 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase AL543_09695 809b9826252b0e1bc80cc368477526c4 328 Gene3D G3DSA:3.30.200.70 13 108 1.5E-125 T 11-10-2018 AL543_09695 809b9826252b0e1bc80cc368477526c4 328 Gene3D G3DSA:1.20.1270.170 149 307 1.5E-125 T 11-10-2018 AL543_09695 809b9826252b0e1bc80cc368477526c4 328 SUPERFAMILY SSF56112 6 328 1.05E-89 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AL543_09695 809b9826252b0e1bc80cc368477526c4 328 Gene3D G3DSA:1.10.510.10 60 258 1.5E-125 T 11-10-2018 AL543_09695 809b9826252b0e1bc80cc368477526c4 328 Hamap MF_01497 Stress response kinase A [srkA]. 4 318 47.326 T 11-10-2018 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 AL543_13560 358553424722ba6b13eb327ddfd9c656 244 SUPERFAMILY SSF55120 2 238 2.4E-61 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL543_13560 358553424722ba6b13eb327ddfd9c656 244 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 50 64 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL543_13560 358553424722ba6b13eb327ddfd9c656 244 Pfam PF00849 RNA pseudouridylate synthase 11 170 1.1E-32 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL543_13560 358553424722ba6b13eb327ddfd9c656 244 Gene3D G3DSA:3.30.2350.10 3 235 2.2E-59 T 11-10-2018 AL543_03435 6f416b872055819996593550a85f1913 366 Pfam PF03459 TOBE domain 293 357 1.0E-17 T 11-10-2018 IPR005116 Transport-associated OB, type 1 AL543_03435 6f416b872055819996593550a85f1913 366 SUPERFAMILY SSF52540 7 236 4.1E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_03435 6f416b872055819996593550a85f1913 366 Gene3D G3DSA:2.40.50.100 292 358 2.8E-13 T 11-10-2018 AL543_03435 6f416b872055819996593550a85f1913 366 Pfam PF00005 ABC transporter 18 158 4.3E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_03435 6f416b872055819996593550a85f1913 366 SUPERFAMILY SSF50331 237 357 9.14E-19 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AL543_03435 6f416b872055819996593550a85f1913 366 Gene3D G3DSA:3.40.50.300 5 241 2.5E-58 T 11-10-2018 AL543_03435 6f416b872055819996593550a85f1913 366 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 4 357 1.0E-158 T 11-10-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 AL543_03435 6f416b872055819996593550a85f1913 366 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_03435 6f416b872055819996593550a85f1913 366 SMART SM00382 25 207 7.9E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_05680 bb2a33ed951867f85e594487ebc5f214 357 Gene3D G3DSA:3.40.50.1110 138 355 5.1E-50 T 11-10-2018 IPR036514 SGNH hydrolase superfamily AL543_05680 bb2a33ed951867f85e594487ebc5f214 357 Gene3D G3DSA:2.60.120.260 13 133 2.2E-19 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily AL543_05680 bb2a33ed951867f85e594487ebc5f214 357 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 145 317 4.6E-11 T 11-10-2018 IPR013830 SGNH hydrolase-type esterase domain AL543_05680 bb2a33ed951867f85e594487ebc5f214 357 SUPERFAMILY SSF52266 140 351 3.21E-17 T 11-10-2018 AL543_21045 1db03929a0538fb4ed5b57274de163f5 42 Pfam PF11665 Protein of unknown function (DUF3265) 10 36 6.9E-9 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL543_03585 3ac1057cacd01ec432ab891305361cae 612 SUPERFAMILY SSF82866 407 604 1.01E-41 T 11-10-2018 AL543_03585 3ac1057cacd01ec432ab891305361cae 612 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 134 598 1.7E-129 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AL543_03585 3ac1057cacd01ec432ab891305361cae 612 Pfam PF13721 SecD export protein N-terminal TM region 14 109 5.0E-21 T 11-10-2018 IPR027398 SecD export protein N-terminal TM domain AL543_03585 3ac1057cacd01ec432ab891305361cae 612 Gene3D G3DSA:3.30.1360.200 295 422 2.5E-23 T 11-10-2018 AL543_03585 3ac1057cacd01ec432ab891305361cae 612 Gene3D G3DSA:3.30.70.3400 210 294 4.6E-17 T 11-10-2018 AL543_03585 3ac1057cacd01ec432ab891305361cae 612 Gene3D G3DSA:1.20.1640.10 423 607 1.8E-7 T 11-10-2018 AL543_03585 3ac1057cacd01ec432ab891305361cae 612 Pfam PF02355 Protein export membrane protein 430 599 5.8E-18 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AL543_03585 3ac1057cacd01ec432ab891305361cae 612 Pfam PF07549 SecD/SecF GG Motif 127 151 1.6E-4 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AL543_03585 3ac1057cacd01ec432ab891305361cae 612 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 15 612 41.783 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AL543_03585 3ac1057cacd01ec432ab891305361cae 612 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 348 590 7.7E-74 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL543_06395 5a7f6fd9dbcde4925655ec354bb8702e 456 Pfam PF00583 Acetyltransferase (GNAT) family 345 422 2.2E-4 T 11-10-2018 IPR000182 GNAT domain AL543_06395 5a7f6fd9dbcde4925655ec354bb8702e 456 Gene3D G3DSA:3.40.630.30 308 456 4.1E-37 T 11-10-2018 AL543_06395 5a7f6fd9dbcde4925655ec354bb8702e 456 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 456 220.049 T 11-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 AL543_06395 5a7f6fd9dbcde4925655ec354bb8702e 456 Pfam PF00696 Amino acid kinase family 36 279 7.5E-26 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AL543_06395 5a7f6fd9dbcde4925655ec354bb8702e 456 SUPERFAMILY SSF55729 311 433 5.23E-18 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL543_06395 5a7f6fd9dbcde4925655ec354bb8702e 456 SUPERFAMILY SSF53633 15 305 8.8E-67 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AL543_06395 5a7f6fd9dbcde4925655ec354bb8702e 456 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 19 456 1.7E-228 T 11-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 AL543_06395 5a7f6fd9dbcde4925655ec354bb8702e 456 PIRSF PIRSF000423 9 456 6.0E-206 T 11-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 AL543_06395 5a7f6fd9dbcde4925655ec354bb8702e 456 Gene3D G3DSA:3.40.1160.10 18 307 1.3E-85 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AL543_01610 0b8a87757ad2c67d98df51650720220e 366 Gene3D G3DSA:3.30.70.270 207 364 1.1E-40 T 11-10-2018 AL543_01610 0b8a87757ad2c67d98df51650720220e 366 Pfam PF00990 Diguanylate cyclase, GGDEF domain 211 358 1.7E-37 T 11-10-2018 IPR000160 GGDEF domain AL543_01610 0b8a87757ad2c67d98df51650720220e 366 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 210 359 7.8E-36 T 11-10-2018 IPR000160 GGDEF domain AL543_01610 0b8a87757ad2c67d98df51650720220e 366 SMART SM00267 200 365 8.3E-37 T 11-10-2018 IPR000160 GGDEF domain AL543_01610 0b8a87757ad2c67d98df51650720220e 366 SUPERFAMILY SSF55073 216 360 1.57E-35 T 11-10-2018 IPR029787 Nucleotide cyclase AL543_02865 491c267e9b45d1dbe194db343c751b04 397 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 11-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL543_02865 491c267e9b45d1dbe194db343c751b04 397 Gene3D G3DSA:3.30.420.40 3 195 8.4E-70 T 11-10-2018 AL543_02865 491c267e9b45d1dbe194db343c751b04 397 TIGRFAM TIGR00016 ackA: acetate kinase 2 396 1.2E-148 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL543_02865 491c267e9b45d1dbe194db343c751b04 397 PIRSF PIRSF000722 2 397 4.2E-139 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL543_02865 491c267e9b45d1dbe194db343c751b04 397 SUPERFAMILY SSF53067 158 396 1.5E-81 T 11-10-2018 AL543_02865 491c267e9b45d1dbe194db343c751b04 397 SUPERFAMILY SSF53067 5 196 4.86E-65 T 11-10-2018 AL543_02865 491c267e9b45d1dbe194db343c751b04 397 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 203 220 - T 11-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL543_02865 491c267e9b45d1dbe194db343c751b04 397 Gene3D G3DSA:3.30.420.40 196 397 5.3E-75 T 11-10-2018 AL543_02865 491c267e9b45d1dbe194db343c751b04 397 PRINTS PR00471 Acetate kinase family signature 378 390 7.4E-48 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL543_02865 491c267e9b45d1dbe194db343c751b04 397 PRINTS PR00471 Acetate kinase family signature 203 224 7.4E-48 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL543_02865 491c267e9b45d1dbe194db343c751b04 397 PRINTS PR00471 Acetate kinase family signature 173 186 7.4E-48 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL543_02865 491c267e9b45d1dbe194db343c751b04 397 PRINTS PR00471 Acetate kinase family signature 321 337 7.4E-48 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL543_02865 491c267e9b45d1dbe194db343c751b04 397 PRINTS PR00471 Acetate kinase family signature 299 312 7.4E-48 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL543_02865 491c267e9b45d1dbe194db343c751b04 397 PRINTS PR00471 Acetate kinase family signature 6 17 7.4E-48 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL543_02865 491c267e9b45d1dbe194db343c751b04 397 Pfam PF00871 Acetokinase family 6 391 1.1E-146 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL543_02865 491c267e9b45d1dbe194db343c751b04 397 Hamap MF_00020 Acetate kinase [ackA]. 1 397 173.689 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL543_00770 055ebc6e36fd9711274892a0173651b2 561 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 397 424 4.0E-23 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL543_00770 055ebc6e36fd9711274892a0173651b2 561 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 208 228 4.0E-23 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL543_00770 055ebc6e36fd9711274892a0173651b2 561 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 426 455 4.0E-23 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL543_00770 055ebc6e36fd9711274892a0173651b2 561 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 363 527 2.4E-43 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_00770 055ebc6e36fd9711274892a0173651b2 561 Pfam PF00672 HAMP domain 233 279 1.1E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_00770 055ebc6e36fd9711274892a0173651b2 561 Gene3D G3DSA:1.10.287.950 232 561 1.8E-71 T 11-10-2018 AL543_00770 055ebc6e36fd9711274892a0173651b2 561 SMART SM00304 232 284 4.0E-9 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_00770 055ebc6e36fd9711274892a0173651b2 561 SUPERFAMILY SSF58104 253 561 5.89E-70 T 11-10-2018 AL543_00770 055ebc6e36fd9711274892a0173651b2 561 SMART SM00283 299 560 5.2E-70 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_15300 6087686f5835e6def10ccb1dbdbd6f1c 155 Pfam PF04191 Phospholipid methyltransferase 46 144 1.8E-9 T 11-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 AL543_15300 6087686f5835e6def10ccb1dbdbd6f1c 155 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 110 155 9.0E-18 T 11-10-2018 AL543_15300 6087686f5835e6def10ccb1dbdbd6f1c 155 Gene3D G3DSA:1.20.120.1630 4 155 6.0E-22 T 11-10-2018 AL543_03115 418c41804361137d8bfb4ed29c1f83b0 632 Gene3D G3DSA:3.30.450.40 16 160 1.6E-14 T 11-10-2018 IPR029016 GAF-like domain superfamily AL543_03115 418c41804361137d8bfb4ed29c1f83b0 632 Pfam PF01590 GAF domain 20 149 2.8E-9 T 11-10-2018 IPR003018 GAF domain GO:0005515 AL543_03115 418c41804361137d8bfb4ed29c1f83b0 632 Gene3D G3DSA:3.30.70.270 205 375 4.1E-18 T 11-10-2018 AL543_03115 418c41804361137d8bfb4ed29c1f83b0 632 Pfam PF00563 EAL domain 379 611 3.8E-72 T 11-10-2018 IPR001633 EAL domain AL543_03115 418c41804361137d8bfb4ed29c1f83b0 632 SMART SM00065 14 161 2.4E-8 T 11-10-2018 IPR003018 GAF domain GO:0005515 AL543_03115 418c41804361137d8bfb4ed29c1f83b0 632 SUPERFAMILY SSF55781 19 163 3.05E-20 T 11-10-2018 AL543_03115 418c41804361137d8bfb4ed29c1f83b0 632 SUPERFAMILY SSF141868 376 624 4.05E-85 T 11-10-2018 IPR035919 EAL domain superfamily AL543_03115 418c41804361137d8bfb4ed29c1f83b0 632 SUPERFAMILY SSF55073 209 358 6.91E-15 T 11-10-2018 IPR029787 Nucleotide cyclase AL543_03115 418c41804361137d8bfb4ed29c1f83b0 632 Gene3D G3DSA:3.20.20.450 376 629 8.6E-90 T 11-10-2018 IPR035919 EAL domain superfamily AL543_03115 418c41804361137d8bfb4ed29c1f83b0 632 SMART SM00267 192 361 4.0E-7 T 11-10-2018 IPR000160 GGDEF domain AL543_03115 418c41804361137d8bfb4ed29c1f83b0 632 Pfam PF00990 Diguanylate cyclase, GGDEF domain 204 355 4.9E-16 T 11-10-2018 IPR000160 GGDEF domain AL543_03115 418c41804361137d8bfb4ed29c1f83b0 632 SMART SM00052 371 616 2.0E-104 T 11-10-2018 IPR001633 EAL domain AL543_14500 899d583539a1d3c931e3001fba382380 589 Pfam PF06276 Ferric iron reductase FhuF-like transporter 404 554 4.3E-29 T 11-10-2018 IPR022770 Ferric iron reductase FhuF domain AL543_14500 899d583539a1d3c931e3001fba382380 589 Pfam PF04183 IucA / IucC family 139 382 7.2E-69 T 11-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 AL543_14500 899d583539a1d3c931e3001fba382380 589 Gene3D G3DSA:1.10.510.40 372 577 4.5E-53 T 11-10-2018 AL543_14500 899d583539a1d3c931e3001fba382380 589 Gene3D G3DSA:1.10.274.90 2 123 6.8E-20 T 11-10-2018 AL543_14780 a416d1234b81c9752066e8880da8d147 324 Gene3D G3DSA:3.40.50.300 1 322 2.0E-96 T 11-10-2018 AL543_14780 a416d1234b81c9752066e8880da8d147 324 Pfam PF00005 ABC transporter 25 181 1.9E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_14780 a416d1234b81c9752066e8880da8d147 324 SUPERFAMILY SSF52540 32 302 1.09E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_14780 a416d1234b81c9752066e8880da8d147 324 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 1.9E-18 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL543_14780 a416d1234b81c9752066e8880da8d147 324 SMART SM00382 33 239 5.4E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_14780 a416d1234b81c9752066e8880da8d147 324 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_14780 a416d1234b81c9752066e8880da8d147 324 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 316 3.8E-23 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL543_12195 6bdf81f7d4ada5d3b30e9f3ff3d1ab4d 327 SUPERFAMILY SSF52540 5 252 1.62E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_12195 6bdf81f7d4ada5d3b30e9f3ff3d1ab4d 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 317 5.2E-22 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL543_12195 6bdf81f7d4ada5d3b30e9f3ff3d1ab4d 327 Gene3D G3DSA:3.40.50.300 3 325 2.1E-90 T 11-10-2018 AL543_12195 6bdf81f7d4ada5d3b30e9f3ff3d1ab4d 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 6.3E-18 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL543_12195 6bdf81f7d4ada5d3b30e9f3ff3d1ab4d 327 Pfam PF00005 ABC transporter 26 181 2.2E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_12195 6bdf81f7d4ada5d3b30e9f3ff3d1ab4d 327 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_12195 6bdf81f7d4ada5d3b30e9f3ff3d1ab4d 327 SMART SM00382 34 231 1.3E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_03935 5e6686dad5ec2a47beecc5a5ccff0ad2 217 Pfam PF00881 Nitroreductase family 9 193 5.8E-27 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AL543_03935 5e6686dad5ec2a47beecc5a5ccff0ad2 217 Gene3D G3DSA:3.40.109.10 1 217 8.6E-58 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AL543_03935 5e6686dad5ec2a47beecc5a5ccff0ad2 217 SUPERFAMILY SSF55469 1 216 1.24E-62 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AL543_15880 d40d1f8b397bf116f56a1d3d8c8dba8b 457 PIRSF PIRSF019381 1 457 3.3E-196 T 11-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein AL543_15880 d40d1f8b397bf116f56a1d3d8c8dba8b 457 Pfam PF04317 YcjX-like family, DUF463 20 456 1.1E-183 T 11-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein AL543_15030 b3d3e3f0660a4a02971ebb2bc06066fd 558 Pfam PF06826 Predicted Permease Membrane Region 387 554 8.6E-43 T 11-10-2018 IPR006512 YidE/YbjL duplication AL543_15030 b3d3e3f0660a4a02971ebb2bc06066fd 558 Pfam PF06826 Predicted Permease Membrane Region 17 185 2.2E-37 T 11-10-2018 IPR006512 YidE/YbjL duplication AL543_15030 b3d3e3f0660a4a02971ebb2bc06066fd 558 Gene3D G3DSA:3.30.70.1450 224 286 3.9E-9 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AL543_15030 b3d3e3f0660a4a02971ebb2bc06066fd 558 Pfam PF02080 TrkA-C domain 228 279 1.9E-8 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL543_15030 b3d3e3f0660a4a02971ebb2bc06066fd 558 Pfam PF02080 TrkA-C domain 307 372 7.4E-9 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL543_15030 b3d3e3f0660a4a02971ebb2bc06066fd 558 Gene3D G3DSA:3.30.70.1450 292 370 1.3E-5 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AL543_15030 b3d3e3f0660a4a02971ebb2bc06066fd 558 SUPERFAMILY SSF116726 292 375 1.83E-10 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AL543_15030 b3d3e3f0660a4a02971ebb2bc06066fd 558 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 21 172 3.6E-30 T 11-10-2018 IPR006512 YidE/YbjL duplication AL543_15030 b3d3e3f0660a4a02971ebb2bc06066fd 558 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 391 542 4.7E-37 T 11-10-2018 IPR006512 YidE/YbjL duplication AL543_15030 b3d3e3f0660a4a02971ebb2bc06066fd 558 Hamap MF_01015 Putative transport protein YbjL [ybjL]. 1 558 59.365 T 11-10-2018 IPR023017 Transport protein YbjL, putative AL543_15030 b3d3e3f0660a4a02971ebb2bc06066fd 558 SUPERFAMILY SSF116726 228 283 5.23E-10 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AL543_00395 67fa63107e657f1ed3481a7a1ad43092 377 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 374 2.0E-157 T 11-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AL543_00395 67fa63107e657f1ed3481a7a1ad43092 377 Gene3D G3DSA:3.90.1510.10 42 276 1.8E-139 T 11-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 AL543_00395 67fa63107e657f1ed3481a7a1ad43092 377 PIRSF PIRSF006078 1 377 2.1E-135 T 11-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AL543_00395 67fa63107e657f1ed3481a7a1ad43092 377 Gene3D G3DSA:3.40.50.10350 1 362 1.8E-139 T 11-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold AL543_00395 67fa63107e657f1ed3481a7a1ad43092 377 Pfam PF02595 Glycerate kinase family 3 373 8.7E-147 T 11-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AL543_00395 67fa63107e657f1ed3481a7a1ad43092 377 SUPERFAMILY SSF110738 1 375 1.96E-140 T 11-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 AL543_07600 149ccd95838d9a779a83f215b778b7ee 115 SUPERFAMILY SSF110857 3 114 6.02E-33 T 11-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily AL543_07600 149ccd95838d9a779a83f215b778b7ee 115 Gene3D G3DSA:3.10.490.10 4 115 1.2E-40 T 11-10-2018 AL543_07600 149ccd95838d9a779a83f215b778b7ee 115 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 5 112 2.2E-27 T 11-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like AL543_07520 b5f27cdab20304b18d090ddf81c59e76 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 2.3E-27 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 AL543_07520 b5f27cdab20304b18d090ddf81c59e76 95 Gene3D G3DSA:3.30.160.100 1 95 1.1E-38 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like AL543_07520 b5f27cdab20304b18d090ddf81c59e76 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 3.4E-32 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 AL543_07520 b5f27cdab20304b18d090ddf81c59e76 95 SUPERFAMILY SSF69754 1 95 3.27E-34 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like AL543_13680 5ebae2dc0f0388526e589acbe5461c39 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 231 4.3E-23 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL543_13680 5ebae2dc0f0388526e589acbe5461c39 240 SMART SM00448 9 119 1.9E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_13680 5ebae2dc0f0388526e589acbe5461c39 240 Pfam PF00072 Response regulator receiver domain 11 119 3.7E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_13680 5ebae2dc0f0388526e589acbe5461c39 240 SMART SM00862 155 231 1.0E-23 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL543_13680 5ebae2dc0f0388526e589acbe5461c39 240 Gene3D G3DSA:3.40.50.2300 3 133 3.9E-33 T 11-10-2018 AL543_13680 5ebae2dc0f0388526e589acbe5461c39 240 SUPERFAMILY SSF52172 6 131 2.13E-35 T 11-10-2018 IPR011006 CheY-like superfamily AL543_13680 5ebae2dc0f0388526e589acbe5461c39 240 SUPERFAMILY SSF46894 128 232 1.76E-26 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL543_13680 5ebae2dc0f0388526e589acbe5461c39 240 Gene3D G3DSA:1.10.10.10 134 239 2.3E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_21010 277949554ceaf142781e3fd2b4373e8b 38 Pfam PF11665 Protein of unknown function (DUF3265) 11 38 2.2E-13 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL543_05300 097aac0fc485a4d93ef647ef6ec0c2d8 99 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 6 92 2.8E-20 T 11-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AL543_05300 097aac0fc485a4d93ef647ef6ec0c2d8 99 PIRSF PIRSF029218 1 98 1.5E-31 T 11-10-2018 IPR028344 Toxin-antitoxin system, toxin component ParE1/4 AL543_05300 097aac0fc485a4d93ef647ef6ec0c2d8 99 Gene3D G3DSA:3.30.2310.20 1 98 2.5E-27 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily AL543_11755 fdd9203fe8c28afd1809b962be421891 232 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 3 225 44.025 T 11-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AL543_11755 fdd9203fe8c28afd1809b962be421891 232 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 101 108 - T 11-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AL543_11755 fdd9203fe8c28afd1809b962be421891 232 SUPERFAMILY SSF53448 3 226 1.25E-63 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL543_11755 fdd9203fe8c28afd1809b962be421891 232 Gene3D G3DSA:3.90.550.10 1 231 1.3E-74 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL543_11755 fdd9203fe8c28afd1809b962be421891 232 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 4 226 2.4E-79 T 11-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AL543_11755 fdd9203fe8c28afd1809b962be421891 232 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 6 225 5.2E-74 T 11-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AL543_19460 5a43a6fd49bc5b019c42072f93d47364 370 SMART SM00859 2 121 1.6E-20 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AL543_19460 5a43a6fd49bc5b019c42072f93d47364 370 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 261 275 - T 11-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AL543_19460 5a43a6fd49bc5b019c42072f93d47364 370 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 1 366 1.9E-189 T 11-10-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AL543_19460 5a43a6fd49bc5b019c42072f93d47364 370 SUPERFAMILY SSF55347 133 354 8.18E-79 T 11-10-2018 AL543_19460 5a43a6fd49bc5b019c42072f93d47364 370 Gene3D G3DSA:3.30.360.10 134 350 2.3E-151 T 11-10-2018 AL543_19460 5a43a6fd49bc5b019c42072f93d47364 370 Gene3D G3DSA:3.40.50.720 3 356 2.3E-151 T 11-10-2018 AL543_19460 5a43a6fd49bc5b019c42072f93d47364 370 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 367 32.09 T 11-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AL543_19460 5a43a6fd49bc5b019c42072f93d47364 370 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 118 3.3E-22 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AL543_19460 5a43a6fd49bc5b019c42072f93d47364 370 PIRSF PIRSF000148 1 370 2.9E-66 T 11-10-2018 AL543_19460 5a43a6fd49bc5b019c42072f93d47364 370 SUPERFAMILY SSF51735 1 146 9.08E-51 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_19460 5a43a6fd49bc5b019c42072f93d47364 370 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 143 353 1.6E-57 T 11-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL543_12210 40bf95dd5176af2724b6860dcb7d7089 556 Gene3D G3DSA:3.10.105.10 268 515 8.1E-203 T 11-10-2018 AL543_12210 40bf95dd5176af2724b6860dcb7d7089 556 SUPERFAMILY SSF53850 40 539 5.07E-106 T 11-10-2018 AL543_12210 40bf95dd5176af2724b6860dcb7d7089 556 Gene3D G3DSA:3.90.76.10 62 168 8.1E-203 T 11-10-2018 AL543_12210 40bf95dd5176af2724b6860dcb7d7089 556 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 80 102 - T 11-10-2018 IPR023765 Solute-binding protein family 5, conserved site AL543_12210 40bf95dd5176af2724b6860dcb7d7089 556 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 75 451 4.3E-76 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain AL543_12210 40bf95dd5176af2724b6860dcb7d7089 556 Gene3D G3DSA:3.40.190.10 43 539 8.1E-203 T 11-10-2018 AL543_12210 40bf95dd5176af2724b6860dcb7d7089 556 PIRSF PIRSF002741 7 531 8.7E-67 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL543_03485 376b03ebc3962fae0512d5d474185ee7 118 Gene3D G3DSA:1.10.3830.10 3 118 1.0E-37 T 11-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AL543_03485 376b03ebc3962fae0512d5d474185ee7 118 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 70 81 - T 11-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AL543_03485 376b03ebc3962fae0512d5d474185ee7 118 Pfam PF01219 Prokaryotic diacylglycerol kinase 16 117 1.4E-34 T 11-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AL543_00115 bd7bbdc5eeda51791ce0b98115a0b055 500 Pfam PF02447 GntP family permease 6 460 2.0E-121 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AL543_00115 bd7bbdc5eeda51791ce0b98115a0b055 500 PIRSF PIRSF002746 1 462 4.9E-132 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AL543_08890 2408311f596a461477255f1788e71ecb 310 SUPERFAMILY SSF56349 117 302 1.35E-53 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL543_08890 2408311f596a461477255f1788e71ecb 310 Pfam PF00589 Phage integrase family 122 290 2.6E-49 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL543_08890 2408311f596a461477255f1788e71ecb 310 Gene3D G3DSA:1.10.150.130 14 108 2.5E-16 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AL543_08890 2408311f596a461477255f1788e71ecb 310 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 15 304 54.706 T 11-10-2018 IPR023009 Tyrosine recombinase XerC/XerD AL543_08890 2408311f596a461477255f1788e71ecb 310 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 17 100 7.2E-18 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AL543_08890 2408311f596a461477255f1788e71ecb 310 SUPERFAMILY SSF47823 16 107 4.12E-10 T 11-10-2018 AL543_08890 2408311f596a461477255f1788e71ecb 310 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 18 306 1.0E-107 T 11-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 AL543_08890 2408311f596a461477255f1788e71ecb 310 Gene3D G3DSA:1.10.443.10 121 298 7.5E-57 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AL543_14100 df3db188cc69da6e69802a382d0459fa 378 Gene3D G3DSA:3.20.20.140 55 341 1.7E-148 T 11-10-2018 AL543_14100 df3db188cc69da6e69802a382d0459fa 378 SUPERFAMILY SSF51338 1 53 2.54E-18 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AL543_14100 df3db188cc69da6e69802a382d0459fa 378 SUPERFAMILY SSF51556 54 347 3.46E-102 T 11-10-2018 IPR032466 Metal-dependent hydrolase AL543_14100 df3db188cc69da6e69802a382d0459fa 378 Gene3D G3DSA:2.30.40.10 6 373 1.7E-148 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AL543_14100 df3db188cc69da6e69802a382d0459fa 378 PIRSF PIRSF038994 1 378 1.4E-123 T 11-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 AL543_14100 df3db188cc69da6e69802a382d0459fa 378 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 374 2.6E-158 T 11-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 AL543_14100 df3db188cc69da6e69802a382d0459fa 378 Pfam PF01979 Amidohydrolase family 51 374 5.9E-40 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AL543_15125 be176d2c56cc06993e434fa8ac5c20ee 245 Gene3D G3DSA:2.40.70.10 104 234 8.2E-42 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily AL543_15125 be176d2c56cc06993e434fa8ac5c20ee 245 SUPERFAMILY SSF50630 107 241 7.88E-42 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily AL543_15125 be176d2c56cc06993e434fa8ac5c20ee 245 Pfam PF05618 Putative ATP-dependant zinc protease 107 243 1.5E-50 T 11-10-2018 AL543_20355 2e885132742fb805e104f9523bbd7749 308 SMART SM00260 17 153 2.4E-25 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AL543_20355 2e885132742fb805e104f9523bbd7749 308 Gene3D G3DSA:2.30.30.40 23 147 3.4E-28 T 11-10-2018 AL543_20355 2e885132742fb805e104f9523bbd7749 308 Gene3D G3DSA:3.40.50.2300 168 308 2.0E-26 T 11-10-2018 AL543_20355 2e885132742fb805e104f9523bbd7749 308 Pfam PF00072 Response regulator receiver domain 184 302 1.1E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_20355 2e885132742fb805e104f9523bbd7749 308 SUPERFAMILY SSF50341 16 157 8.89E-36 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AL543_20355 2e885132742fb805e104f9523bbd7749 308 SUPERFAMILY SSF52172 183 306 5.12E-26 T 11-10-2018 IPR011006 CheY-like superfamily AL543_20355 2e885132742fb805e104f9523bbd7749 308 SMART SM00448 182 302 3.0E-19 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_20355 2e885132742fb805e104f9523bbd7749 308 Gene3D G3DSA:2.40.50.180 39 153 3.4E-28 T 11-10-2018 AL543_20355 2e885132742fb805e104f9523bbd7749 308 PIRSF PIRSF002867 1 308 1.6E-102 T 11-10-2018 IPR024181 Chemotaxis response regulator CheV AL543_20355 2e885132742fb805e104f9523bbd7749 308 Pfam PF01584 CheW-like domain 21 155 6.4E-35 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AL543_07825 e27e0493fa345e5c0619c92bb100427c 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 6.9E-25 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07825 e27e0493fa345e5c0619c92bb100427c 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 6.9E-25 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07825 e27e0493fa345e5c0619c92bb100427c 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 6.9E-25 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07825 e27e0493fa345e5c0619c92bb100427c 92 Pfam PF00203 Ribosomal protein S19 3 83 1.9E-36 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07825 e27e0493fa345e5c0619c92bb100427c 92 PIRSF PIRSF002144 1 92 8.6E-32 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07825 e27e0493fa345e5c0619c92bb100427c 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.757 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07825 e27e0493fa345e5c0619c92bb100427c 92 SUPERFAMILY SSF54570 3 84 1.01E-35 T 11-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07825 e27e0493fa345e5c0619c92bb100427c 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 11-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07825 e27e0493fa345e5c0619c92bb100427c 92 Gene3D G3DSA:3.30.860.10 1 92 6.2E-44 T 11-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07825 e27e0493fa345e5c0619c92bb100427c 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 1.1E-46 T 11-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 AL543_00900 0ca9c3bc70ee88908609aca1aac3922f 313 Gene3D G3DSA:2.70.70.10 141 263 8.0E-42 T 11-10-2018 IPR011055 Duplicated hybrid motif AL543_00900 0ca9c3bc70ee88908609aca1aac3922f 313 SUPERFAMILY SSF51261 64 265 1.2E-49 T 11-10-2018 IPR011055 Duplicated hybrid motif AL543_00900 0ca9c3bc70ee88908609aca1aac3922f 313 Pfam PF01551 Peptidase family M23 167 262 2.0E-28 T 11-10-2018 IPR016047 Peptidase M23 AL543_06100 7e308a26bb93f9a282e93359a5765322 803 Gene3D G3DSA:3.10.20.310 266 346 5.9E-12 T 11-10-2018 AL543_06100 7e308a26bb93f9a282e93359a5765322 803 Gene3D G3DSA:2.40.160.50 425 803 4.5E-119 T 11-10-2018 AL543_06100 7e308a26bb93f9a282e93359a5765322 803 Pfam PF01103 Surface antigen 448 803 2.5E-87 T 11-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 AL543_06100 7e308a26bb93f9a282e93359a5765322 803 Gene3D G3DSA:3.10.20.310 18 91 9.8E-20 T 11-10-2018 AL543_06100 7e308a26bb93f9a282e93359a5765322 803 Gene3D G3DSA:3.10.20.310 347 424 6.5E-25 T 11-10-2018 AL543_06100 7e308a26bb93f9a282e93359a5765322 803 Gene3D G3DSA:3.10.20.310 175 264 3.9E-23 T 11-10-2018 AL543_06100 7e308a26bb93f9a282e93359a5765322 803 PIRSF PIRSF006076 1 803 2.2E-243 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AL543_06100 7e308a26bb93f9a282e93359a5765322 803 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 803 25.652 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AL543_06100 7e308a26bb93f9a282e93359a5765322 803 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 803 1.6E-278 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AL543_06100 7e308a26bb93f9a282e93359a5765322 803 Gene3D G3DSA:3.10.20.310 92 174 3.4E-17 T 11-10-2018 AL543_06100 7e308a26bb93f9a282e93359a5765322 803 Pfam PF07244 Surface antigen variable number repeat 266 344 2.1E-9 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AL543_06100 7e308a26bb93f9a282e93359a5765322 803 Pfam PF07244 Surface antigen variable number repeat 176 263 7.1E-16 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AL543_06100 7e308a26bb93f9a282e93359a5765322 803 Pfam PF07244 Surface antigen variable number repeat 92 172 2.0E-11 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AL543_06100 7e308a26bb93f9a282e93359a5765322 803 Pfam PF07244 Surface antigen variable number repeat 347 420 3.9E-15 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AL543_13870 c61fc093800c2ac86a01866147f463ed 92 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 6 92 25.583 T 11-10-2018 IPR007454 Uncharacterised protein family UPF0250 AL543_13870 c61fc093800c2ac86a01866147f463ed 92 SUPERFAMILY SSF117991 7 92 6.93E-30 T 11-10-2018 IPR027471 YbeD-like domain superfamily AL543_13870 c61fc093800c2ac86a01866147f463ed 92 Gene3D G3DSA:3.30.70.260 6 92 4.9E-32 T 11-10-2018 AL543_13870 c61fc093800c2ac86a01866147f463ed 92 Pfam PF04359 Protein of unknown function (DUF493) 12 92 1.2E-27 T 11-10-2018 IPR007454 Uncharacterised protein family UPF0250 AL543_20450 5ace3144948beb0c956dd8dfdd8edeba 208 Gene3D G3DSA:3.40.50.2020 1 208 3.9E-74 T 11-10-2018 AL543_20450 5ace3144948beb0c956dd8dfdd8edeba 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 208 2.5E-92 T 11-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 AL543_20450 5ace3144948beb0c956dd8dfdd8edeba 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 1.8E-65 T 11-10-2018 AL543_20450 5ace3144948beb0c956dd8dfdd8edeba 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 44.694 T 11-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 AL543_20450 5ace3144948beb0c956dd8dfdd8edeba 208 SUPERFAMILY SSF53271 4 206 6.56E-67 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AL543_17195 dee35db58c1911f247812e9adb283caa 171 Gene3D G3DSA:1.25.40.20 20 170 1.4E-27 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily AL543_17195 dee35db58c1911f247812e9adb283caa 171 Pfam PF12796 Ankyrin repeats (3 copies) 39 124 7.0E-12 T 11-10-2018 IPR020683 Ankyrin repeat-containing domain AL543_17195 dee35db58c1911f247812e9adb283caa 171 SMART SM00248 35 64 12.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 AL543_17195 dee35db58c1911f247812e9adb283caa 171 SMART SM00248 68 97 0.0055 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 AL543_17195 dee35db58c1911f247812e9adb283caa 171 SMART SM00248 101 132 640.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 AL543_17195 dee35db58c1911f247812e9adb283caa 171 SUPERFAMILY SSF48403 35 156 4.82E-26 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily AL543_13465 1ae47445d91cb554a5f4257c450ac407 170 SUPERFAMILY SSF53927 5 159 1.19E-56 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AL543_13465 1ae47445d91cb554a5f4257c450ac407 170 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 14 155 44.308 T 11-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 AL543_13465 1ae47445d91cb554a5f4257c450ac407 170 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 59 96 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AL543_13465 1ae47445d91cb554a5f4257c450ac407 170 Gene3D G3DSA:3.40.140.10 4 169 1.3E-63 T 11-10-2018 AL543_13465 1ae47445d91cb554a5f4257c450ac407 170 Pfam PF14437 MafB19-like deaminase 10 155 1.8E-31 T 11-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 AL543_17040 e2fe0723352f5d00785cafb5deaef40d 253 SMART SM01134 74 235 1.2E-60 T 11-10-2018 AL543_17040 e2fe0723352f5d00785cafb5deaef40d 253 Pfam PF08220 DeoR-like helix-turn-helix domain 7 62 1.9E-16 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL543_17040 e2fe0723352f5d00785cafb5deaef40d 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 26 40 1.2E-7 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL543_17040 e2fe0723352f5d00785cafb5deaef40d 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 40 58 1.2E-7 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL543_17040 e2fe0723352f5d00785cafb5deaef40d 253 Gene3D G3DSA:3.30.750.70 75 140 5.3E-5 T 11-10-2018 AL543_17040 e2fe0723352f5d00785cafb5deaef40d 253 Gene3D G3DSA:1.10.10.10 2 57 4.0E-11 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_17040 e2fe0723352f5d00785cafb5deaef40d 253 SUPERFAMILY SSF100950 75 234 5.12E-24 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AL543_17040 e2fe0723352f5d00785cafb5deaef40d 253 Pfam PF00455 DeoR C terminal sensor domain 76 234 1.7E-44 T 11-10-2018 IPR014036 DeoR C-terminal sensor domain AL543_17040 e2fe0723352f5d00785cafb5deaef40d 253 SMART SM00420 7 60 6.8E-15 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL543_17040 e2fe0723352f5d00785cafb5deaef40d 253 SUPERFAMILY SSF46785 4 77 3.18E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_01600 fde342a500642cfb57cef644e4629fcd 287 Gene3D G3DSA:1.10.3720.10 62 284 3.9E-34 T 11-10-2018 IPR035906 MetI-like superfamily AL543_01600 fde342a500642cfb57cef644e4629fcd 287 SUPERFAMILY SSF161098 21 274 9.16E-42 T 11-10-2018 IPR035906 MetI-like superfamily AL543_01600 fde342a500642cfb57cef644e4629fcd 287 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 15 283 1.4E-99 T 11-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 AL543_01600 fde342a500642cfb57cef644e4629fcd 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 283 5.4E-26 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL543_04765 8dd57fde53d48bacb058bae3c35018b5 197 SUPERFAMILY SSF140931 22 185 1.31E-18 T 11-10-2018 IPR036597 Fido-like domain superfamily AL543_04765 8dd57fde53d48bacb058bae3c35018b5 197 Gene3D G3DSA:1.10.3290.10 1 193 4.2E-30 T 11-10-2018 IPR036597 Fido-like domain superfamily AL543_04765 8dd57fde53d48bacb058bae3c35018b5 197 Pfam PF02661 Fic/DOC family 47 140 4.2E-9 T 11-10-2018 IPR003812 Fido domain AL543_01020 a6c5dd8b290a75c61973bf07d6a45e1c 340 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 10 337 3.0E-67 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AL543_01020 a6c5dd8b290a75c61973bf07d6a45e1c 340 Gene3D G3DSA:3.40.50.620 13 332 2.1E-98 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL543_01020 a6c5dd8b290a75c61973bf07d6a45e1c 340 Gene3D G3DSA:1.10.240.10 191 305 2.1E-98 T 11-10-2018 AL543_01020 a6c5dd8b290a75c61973bf07d6a45e1c 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 204 214 2.8E-22 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AL543_01020 a6c5dd8b290a75c61973bf07d6a45e1c 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 74 93 2.8E-22 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AL543_01020 a6c5dd8b290a75c61973bf07d6a45e1c 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 152 173 2.8E-22 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AL543_01020 a6c5dd8b290a75c61973bf07d6a45e1c 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 23 39 2.8E-22 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AL543_01020 a6c5dd8b290a75c61973bf07d6a45e1c 340 Pfam PF00579 tRNA synthetases class I (W and Y) 12 293 1.3E-51 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL543_01020 a6c5dd8b290a75c61973bf07d6a45e1c 340 SUPERFAMILY SSF52374 12 337 1.9E-74 T 11-10-2018 AL543_08195 1ebccf4ac7ed24cea152bbaea1a95097 257 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 241 1.1E-79 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_08195 1ebccf4ac7ed24cea152bbaea1a95097 257 Pfam PF00121 Triosephosphate isomerase 5 247 1.8E-87 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_08195 1ebccf4ac7ed24cea152bbaea1a95097 257 ProSitePatterns PS00171 Triosephosphate isomerase active site. 167 177 - T 11-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_08195 1ebccf4ac7ed24cea152bbaea1a95097 257 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 250 59.488 T 11-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_08195 1ebccf4ac7ed24cea152bbaea1a95097 257 Gene3D G3DSA:3.20.20.70 1 256 4.0E-100 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_08195 1ebccf4ac7ed24cea152bbaea1a95097 257 SUPERFAMILY SSF51351 2 251 1.7E-89 T 11-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_08470 2e315f7471dadf32bfcc370d597d8894 407 SUPERFAMILY SSF53067 150 243 1.05E-20 T 11-10-2018 AL543_08470 2e315f7471dadf32bfcc370d597d8894 407 SUPERFAMILY SSF53067 6 147 4.01E-40 T 11-10-2018 AL543_08470 2e315f7471dadf32bfcc370d597d8894 407 Pfam PF12693 GspL periplasmic domain 250 406 3.0E-51 T 11-10-2018 IPR025691 GspL periplasmic domain AL543_08470 2e315f7471dadf32bfcc370d597d8894 407 PIRSF PIRSF015761 8 405 8.7E-36 T 11-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 AL543_08470 2e315f7471dadf32bfcc370d597d8894 407 Gene3D G3DSA:3.30.1360.100 322 407 7.3E-25 T 11-10-2018 AL543_08470 2e315f7471dadf32bfcc370d597d8894 407 Pfam PF05134 Type II secretion system (T2SS), protein L 9 245 3.2E-80 T 11-10-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain AL543_08470 2e315f7471dadf32bfcc370d597d8894 407 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 9 406 2.0E-118 T 11-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 AL543_08470 2e315f7471dadf32bfcc370d597d8894 407 Gene3D G3DSA:3.30.420.380 7 242 1.0E-90 T 11-10-2018 AL543_08470 2e315f7471dadf32bfcc370d597d8894 407 Gene3D G3DSA:3.30.420.370 146 220 1.0E-90 T 11-10-2018 AL543_10745 1747248111691e3bf8d2dea55fd85598 510 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 83 297 7.3E-81 T 11-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL543_10745 1747248111691e3bf8d2dea55fd85598 510 PIRSF PIRSF001492 1 510 1.0E-204 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL543_10745 1747248111691e3bf8d2dea55fd85598 510 SUPERFAMILY SSF53649 5 509 1.03E-78 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AL543_10745 1747248111691e3bf8d2dea55fd85598 510 Gene3D G3DSA:3.40.1450.10 78 310 1.6E-214 T 11-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL543_10745 1747248111691e3bf8d2dea55fd85598 510 Pfam PF01676 Metalloenzyme superfamily 5 496 1.7E-82 T 11-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 AL543_10745 1747248111691e3bf8d2dea55fd85598 510 SUPERFAMILY SSF64158 78 308 5.23E-82 T 11-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL543_10745 1747248111691e3bf8d2dea55fd85598 510 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 5 508 2.0E-228 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL543_10745 1747248111691e3bf8d2dea55fd85598 510 Gene3D G3DSA:3.40.720.10 6 507 1.6E-214 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AL543_10745 1747248111691e3bf8d2dea55fd85598 510 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 5 510 49.611 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL543_19450 ef38619c970dd5ada66f636f63c1f87c 212 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 6 204 4.5E-67 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AL543_19450 ef38619c970dd5ada66f636f63c1f87c 212 Pfam PF01914 MarC family integral membrane protein 8 208 4.8E-65 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AL543_02440 5360dc757d289f97c3f82b318b93b9e1 394 SUPERFAMILY SSF63380 151 261 4.94E-26 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AL543_02440 5360dc757d289f97c3f82b318b93b9e1 394 Pfam PF00042 Globin 8 103 2.3E-13 T 11-10-2018 IPR000971 Globin GO:0020037 AL543_02440 5360dc757d289f97c3f82b318b93b9e1 394 Hamap MF_01252 Flavohemoprotein [hmp]. 1 392 52.133 T 11-10-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 AL543_02440 5360dc757d289f97c3f82b318b93b9e1 394 Gene3D G3DSA:1.10.490.10 1 144 2.5E-53 T 11-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 AL543_02440 5360dc757d289f97c3f82b318b93b9e1 394 Gene3D G3DSA:2.40.30.10 152 261 1.0E-33 T 11-10-2018 AL543_02440 5360dc757d289f97c3f82b318b93b9e1 394 SUPERFAMILY SSF52343 250 384 1.07E-29 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AL543_02440 5360dc757d289f97c3f82b318b93b9e1 394 Gene3D G3DSA:3.40.50.80 262 394 3.1E-36 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AL543_02440 5360dc757d289f97c3f82b318b93b9e1 394 Pfam PF00175 Oxidoreductase NAD-binding domain 270 368 4.7E-11 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AL543_02440 5360dc757d289f97c3f82b318b93b9e1 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 185 197 3.5E-6 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL543_02440 5360dc757d289f97c3f82b318b93b9e1 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 269 288 3.5E-6 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL543_02440 5360dc757d289f97c3f82b318b93b9e1 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 354 362 3.5E-6 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL543_02440 5360dc757d289f97c3f82b318b93b9e1 394 Pfam PF00970 Oxidoreductase FAD-binding domain 158 261 2.8E-8 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 AL543_02440 5360dc757d289f97c3f82b318b93b9e1 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 269 288 6.4E-7 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL543_02440 5360dc757d289f97c3f82b318b93b9e1 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 206 213 6.4E-7 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL543_02440 5360dc757d289f97c3f82b318b93b9e1 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 185 195 6.4E-7 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL543_02440 5360dc757d289f97c3f82b318b93b9e1 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 354 362 6.4E-7 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL543_02440 5360dc757d289f97c3f82b318b93b9e1 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 234 243 6.4E-7 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL543_02440 5360dc757d289f97c3f82b318b93b9e1 394 SUPERFAMILY SSF46458 1 143 7.48E-40 T 11-10-2018 IPR009050 Globin-like superfamily AL543_08990 2da87d75bbf18701601cfe8c0b57f5af 145 Gene3D G3DSA:3.40.630.30 2 139 9.1E-17 T 11-10-2018 AL543_08990 2da87d75bbf18701601cfe8c0b57f5af 145 SUPERFAMILY SSF55729 23 128 7.38E-19 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL543_08990 2da87d75bbf18701601cfe8c0b57f5af 145 Pfam PF00583 Acetyltransferase (GNAT) family 30 104 1.1E-9 T 11-10-2018 IPR000182 GNAT domain AL543_18075 0ee654332ff8058ab4d09abd84b9721e 321 Pfam PF00482 Type II secretion system (T2SS), protein F 154 279 1.1E-17 T 11-10-2018 IPR018076 Type II secretion system F domain AL543_18075 0ee654332ff8058ab4d09abd84b9721e 321 Gene3D G3DSA:1.20.81.30 145 257 2.3E-6 T 11-10-2018 AL543_15585 0e20ec86d385886fad24231935068015 245 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 21 245 37.447 T 11-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 AL543_15585 0e20ec86d385886fad24231935068015 245 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 21 239 2.0E-88 T 11-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 AL543_15585 0e20ec86d385886fad24231935068015 245 Gene3D G3DSA:3.40.50.150 21 243 5.4E-77 T 11-10-2018 AL543_15585 0e20ec86d385886fad24231935068015 245 SUPERFAMILY SSF53335 25 225 3.98E-46 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL543_15585 0e20ec86d385886fad24231935068015 245 Pfam PF13489 Methyltransferase domain 62 207 5.5E-26 T 11-10-2018 AL543_12055 e5e3899e59b7609a9ff0c56bd03a6757 177 SUPERFAMILY SSF53271 3 174 2.23E-55 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AL543_12055 e5e3899e59b7609a9ff0c56bd03a6757 177 Gene3D G3DSA:3.40.50.2020 1 176 1.1E-65 T 11-10-2018 AL543_12055 e5e3899e59b7609a9ff0c56bd03a6757 177 Pfam PF00156 Phosphoribosyl transferase domain 12 159 5.5E-28 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AL543_12055 e5e3899e59b7609a9ff0c56bd03a6757 177 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 172 3.9E-75 T 11-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 AL543_07975 c499e070734ec9e9d9abf8d08e3fc5a2 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 5.1E-26 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AL543_07975 c499e070734ec9e9d9abf8d08e3fc5a2 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 198 208 5.1E-26 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AL543_07975 c499e070734ec9e9d9abf8d08e3fc5a2 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 142 163 5.1E-26 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AL543_07975 c499e070734ec9e9d9abf8d08e3fc5a2 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 5.1E-26 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AL543_07975 c499e070734ec9e9d9abf8d08e3fc5a2 338 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 334 2.0E-107 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AL543_07975 c499e070734ec9e9d9abf8d08e3fc5a2 338 Pfam PF00579 tRNA synthetases class I (W and Y) 3 289 3.6E-77 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL543_07975 c499e070734ec9e9d9abf8d08e3fc5a2 338 Gene3D G3DSA:1.10.240.10 191 304 2.4E-140 T 11-10-2018 AL543_07975 c499e070734ec9e9d9abf8d08e3fc5a2 338 SUPERFAMILY SSF52374 5 334 1.49E-91 T 11-10-2018 AL543_07975 c499e070734ec9e9d9abf8d08e3fc5a2 338 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 335 40.411 T 11-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 AL543_07975 c499e070734ec9e9d9abf8d08e3fc5a2 338 Gene3D G3DSA:3.40.50.620 5 333 2.4E-140 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL543_17440 bcd45aa65f9f9f258594fff56fecf219 588 Pfam PF00271 Helicase conserved C-terminal domain 238 342 1.1E-14 T 11-10-2018 IPR001650 Helicase, C-terminal AL543_17440 bcd45aa65f9f9f258594fff56fecf219 588 SMART SM00490 265 344 2.0E-12 T 11-10-2018 IPR001650 Helicase, C-terminal AL543_17440 bcd45aa65f9f9f258594fff56fecf219 588 Pfam PF04851 Type III restriction enzyme, res subunit 2 154 8.8E-23 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AL543_17440 bcd45aa65f9f9f258594fff56fecf219 588 SUPERFAMILY SSF57829 425 465 2.01E-6 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 AL543_17440 bcd45aa65f9f9f258594fff56fecf219 588 SMART SM00487 1 184 5.4E-14 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL543_17440 bcd45aa65f9f9f258594fff56fecf219 588 Gene3D G3DSA:3.40.50.300 207 367 1.6E-33 T 11-10-2018 AL543_17440 bcd45aa65f9f9f258594fff56fecf219 588 Gene3D G3DSA:3.40.50.300 1 166 9.4E-29 T 11-10-2018 AL543_17440 bcd45aa65f9f9f258594fff56fecf219 588 SUPERFAMILY SSF52540 49 362 1.75E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_14655 6e5830f2273379d77a0bb387d674149b 284 Gene3D G3DSA:3.20.20.70 1 284 5.2E-108 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_14655 6e5830f2273379d77a0bb387d674149b 284 PIRSF PIRSF001359 1 284 1.4E-110 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AL543_14655 6e5830f2273379d77a0bb387d674149b 284 TIGRFAM TIGR01858 tag_bisphos_ald: class II aldolase, tagatose bisphosphate family 3 283 3.4E-150 T 11-10-2018 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY GO:0005975|GO:0008270|GO:0009025 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395 AL543_14655 6e5830f2273379d77a0bb387d674149b 284 Pfam PF01116 Fructose-bisphosphate aldolase class-II 6 283 5.3E-100 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AL543_14655 6e5830f2273379d77a0bb387d674149b 284 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 131 142 - T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AL543_14655 6e5830f2273379d77a0bb387d674149b 284 SUPERFAMILY SSF51569 3 283 1.39E-101 T 11-10-2018 AL543_14655 6e5830f2273379d77a0bb387d674149b 284 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 283 2.6E-102 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AL543_19160 bb51b5f8aa7902cedacaac73c68c0813 194 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 80 184 1.0E-37 T 11-10-2018 AL543_19160 bb51b5f8aa7902cedacaac73c68c0813 194 SMART SM00471 26 151 2.8E-8 T 11-10-2018 IPR003607 HD/PDEase domain AL543_19160 bb51b5f8aa7902cedacaac73c68c0813 194 Gene3D G3DSA:1.10.3210.10 1 194 2.0E-83 T 11-10-2018 AL543_19160 bb51b5f8aa7902cedacaac73c68c0813 194 Pfam PF13023 HD domain 11 163 6.8E-16 T 11-10-2018 IPR006674 HD domain AL543_19160 bb51b5f8aa7902cedacaac73c68c0813 194 SUPERFAMILY SSF109604 4 193 3.43E-43 T 11-10-2018 AL543_19160 bb51b5f8aa7902cedacaac73c68c0813 194 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 3 194 46.71 T 11-10-2018 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 AL543_01355 032b76c07384d3b224e4734e67a2ea44 118 Pfam PF10928 Protein of unknown function (DUF2810) 65 116 5.9E-28 T 11-10-2018 IPR021230 Protein of unknown function DUF2810 AL543_01355 032b76c07384d3b224e4734e67a2ea44 118 Gene3D G3DSA:3.30.1370.150 59 118 2.2E-29 T 11-10-2018 AL543_02275 7eae83f15da20627538838b2b755b22a 1245 Pfam PF10462 Peptidase M66 352 657 1.0E-90 T 11-10-2018 IPR019503 Peptidase M66 domain GO:0004222 AL543_02275 7eae83f15da20627538838b2b755b22a 1245 Gene3D G3DSA:3.30.160.280 1012 1077 1.2E-14 T 11-10-2018 AL543_02275 7eae83f15da20627538838b2b755b22a 1245 Gene3D G3DSA:3.30.160.280 1184 1245 5.7E-11 T 11-10-2018 AL543_02275 7eae83f15da20627538838b2b755b22a 1245 Pfam PF12561 ToxR activated gene A lipoprotein 723 856 9.6E-56 T 11-10-2018 IPR022218 ToxR activated gene A lipoprotein AL543_08090 83980c1299c9ed1499d2963789422ed2 179 Pfam PF03551 Transcriptional regulator PadR-like family 7 80 6.7E-16 T 11-10-2018 IPR005149 Transcription regulator PadR, N-terminal AL543_08090 83980c1299c9ed1499d2963789422ed2 179 SUPERFAMILY SSF46785 3 178 2.27E-45 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_08090 83980c1299c9ed1499d2963789422ed2 179 Gene3D G3DSA:1.10.10.10 1 89 7.5E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_08090 83980c1299c9ed1499d2963789422ed2 179 Pfam PF10400 Virulence activator alpha C-term 92 175 7.7E-15 T 11-10-2018 IPR018309 Transcription regulator PadR, C-terminal AL543_09760 460e04566e5ad537e1b2337ba8fe2d45 371 Pfam PF02481 DNA recombination-mediator protein A 78 278 1.1E-78 T 11-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 AL543_09760 460e04566e5ad537e1b2337ba8fe2d45 371 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 76 287 9.5E-77 T 11-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 AL543_09760 460e04566e5ad537e1b2337ba8fe2d45 371 Gene3D G3DSA:1.10.10.10 295 367 1.4E-5 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_09760 460e04566e5ad537e1b2337ba8fe2d45 371 Gene3D G3DSA:3.40.50.450 1 291 3.2E-98 T 11-10-2018 AL543_09760 460e04566e5ad537e1b2337ba8fe2d45 371 SUPERFAMILY SSF102405 81 288 5.49E-44 T 11-10-2018 AL543_17710 b6c489b32fb4b888ba198d3254ed944c 262 Pfam PF00005 ABC transporter 30 178 2.3E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_17710 b6c489b32fb4b888ba198d3254ed944c 262 SMART SM00382 38 227 2.6E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_17710 b6c489b32fb4b888ba198d3254ed944c 262 Gene3D G3DSA:3.40.50.300 1 261 1.3E-69 T 11-10-2018 AL543_17710 b6c489b32fb4b888ba198d3254ed944c 262 SUPERFAMILY SSF52540 4 252 5.56E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_15935 15c7f13a35431e5b7d6dae204a1f4ea1 158 SUPERFAMILY SSF52172 1 133 1.85E-21 T 11-10-2018 IPR011006 CheY-like superfamily AL543_15935 15c7f13a35431e5b7d6dae204a1f4ea1 158 Pfam PF00072 Response regulator receiver domain 6 125 6.8E-15 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_15935 15c7f13a35431e5b7d6dae204a1f4ea1 158 Gene3D G3DSA:3.40.50.2300 1 136 6.6E-20 T 11-10-2018 AL543_15935 15c7f13a35431e5b7d6dae204a1f4ea1 158 SMART SM00448 4 125 4.2E-12 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_18725 9b3ca0eb65f8f23865a660130d119a11 703 TIGRFAM TIGR04456 LruC_dom: LruC domain 440 691 1.3E-82 T 11-10-2018 IPR031025 LruC domain AL543_18725 9b3ca0eb65f8f23865a660130d119a11 703 SUPERFAMILY SSF82171 151 486 2.35E-6 T 11-10-2018 AL543_18725 9b3ca0eb65f8f23865a660130d119a11 703 Pfam PF16130 Domain of unknown function (DUF4842) 472 690 2.2E-55 T 11-10-2018 IPR032295 Domain of unknown function DUF4842 AL543_18725 9b3ca0eb65f8f23865a660130d119a11 703 SUPERFAMILY SSF63829 44 246 7.19E-12 T 11-10-2018 AL543_11955 48b0d91e62bf42a641681c9cdd5c305f 247 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 234 9.2E-108 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AL543_11955 48b0d91e62bf42a641681c9cdd5c305f 247 SUPERFAMILY SSF75217 1 245 1.64E-101 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AL543_11955 48b0d91e62bf42a641681c9cdd5c305f 247 Gene3D G3DSA:3.40.1280.10 1 160 4.9E-67 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL543_11955 48b0d91e62bf42a641681c9cdd5c305f 247 PIRSF PIRSF000386 1 247 3.4E-101 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AL543_11955 48b0d91e62bf42a641681c9cdd5c305f 247 Gene3D G3DSA:1.10.1270.20 161 247 7.1E-34 T 11-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AL543_11955 48b0d91e62bf42a641681c9cdd5c305f 247 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 247 116.692 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AL543_11955 48b0d91e62bf42a641681c9cdd5c305f 247 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 2.6E-69 T 11-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AL543_09220 f52921ea9eb31de31ad6230ff63d1458 154 SMART SM00344 8 115 9.4E-41 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AL543_09220 f52921ea9eb31de31ad6230ff63d1458 154 Pfam PF01037 Lrp/AsnC ligand binding domain 75 145 1.6E-17 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AL543_09220 f52921ea9eb31de31ad6230ff63d1458 154 Gene3D G3DSA:3.30.70.920 60 142 2.6E-32 T 11-10-2018 AL543_09220 f52921ea9eb31de31ad6230ff63d1458 154 SUPERFAMILY SSF54909 69 154 1.03E-19 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AL543_09220 f52921ea9eb31de31ad6230ff63d1458 154 SUPERFAMILY SSF46785 7 68 6.2E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_09220 f52921ea9eb31de31ad6230ff63d1458 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 2.5E-10 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL543_09220 f52921ea9eb31de31ad6230ff63d1458 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 2.5E-10 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL543_09220 f52921ea9eb31de31ad6230ff63d1458 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 2.5E-10 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL543_09220 f52921ea9eb31de31ad6230ff63d1458 154 Pfam PF13404 AsnC-type helix-turn-helix domain 8 49 1.1E-14 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL543_09220 f52921ea9eb31de31ad6230ff63d1458 154 Gene3D G3DSA:1.10.10.10 4 59 1.6E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_02245 111a804607e81503d08000dbe14db1d4 684 SMART SM00388 466 534 0.0088 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_02245 111a804607e81503d08000dbe14db1d4 684 SUPERFAMILY SSF55874 539 680 7.33E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_02245 111a804607e81503d08000dbe14db1d4 684 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 307 432 6.2E-14 T 11-10-2018 IPR000014 PAS domain AL543_02245 111a804607e81503d08000dbe14db1d4 684 SMART SM00387 574 682 9.4E-27 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_02245 111a804607e81503d08000dbe14db1d4 684 Gene3D G3DSA:1.10.287.130 443 529 3.2E-13 T 11-10-2018 AL543_02245 111a804607e81503d08000dbe14db1d4 684 SUPERFAMILY SSF103190 55 174 3.18E-5 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily AL543_02245 111a804607e81503d08000dbe14db1d4 684 Gene3D G3DSA:3.30.565.10 535 684 2.2E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_02245 111a804607e81503d08000dbe14db1d4 684 Gene3D G3DSA:3.30.450.20 313 442 9.4E-16 T 11-10-2018 AL543_02245 111a804607e81503d08000dbe14db1d4 684 Pfam PF13426 PAS domain 321 425 1.3E-8 T 11-10-2018 IPR000014 PAS domain AL543_02245 111a804607e81503d08000dbe14db1d4 684 Pfam PF00512 His Kinase A (phospho-acceptor) domain 466 528 2.3E-6 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_02245 111a804607e81503d08000dbe14db1d4 684 SUPERFAMILY SSF47384 454 529 3.73E-7 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL543_02245 111a804607e81503d08000dbe14db1d4 684 SUPERFAMILY SSF55785 300 424 3.05E-15 T 11-10-2018 IPR035965 PAS domain superfamily AL543_02245 111a804607e81503d08000dbe14db1d4 684 Gene3D G3DSA:3.30.450.20 55 170 7.0E-13 T 11-10-2018 AL543_02245 111a804607e81503d08000dbe14db1d4 684 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 574 683 6.3E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_02245 111a804607e81503d08000dbe14db1d4 684 PRINTS PR00344 Bacterial sensor protein C-terminal signature 613 627 6.3E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_02245 111a804607e81503d08000dbe14db1d4 684 PRINTS PR00344 Bacterial sensor protein C-terminal signature 631 641 6.3E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_02245 111a804607e81503d08000dbe14db1d4 684 PRINTS PR00344 Bacterial sensor protein C-terminal signature 668 681 6.3E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_02245 111a804607e81503d08000dbe14db1d4 684 PRINTS PR00344 Bacterial sensor protein C-terminal signature 644 662 6.3E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_02245 111a804607e81503d08000dbe14db1d4 684 PIRSF PIRSF036431 1 684 9.7E-209 T 11-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) AL543_02245 111a804607e81503d08000dbe14db1d4 684 SMART SM00091 310 377 3.4E-5 T 11-10-2018 IPR000014 PAS domain AL543_15780 d79ffcd139c91c51bc9ac4e199778583 252 Hamap MF_01246 Chitooligosaccharide deacetylase [chbG]. 1 240 38.822 T 11-10-2018 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria GO:0000272|GO:0016811 AL543_15780 d79ffcd139c91c51bc9ac4e199778583 252 SUPERFAMILY SSF88713 1 243 3.56E-70 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AL543_15780 d79ffcd139c91c51bc9ac4e199778583 252 Gene3D G3DSA:3.20.20.370 1 244 2.4E-72 T 11-10-2018 AL543_15780 d79ffcd139c91c51bc9ac4e199778583 252 Pfam PF04794 YdjC-like protein 2 231 3.6E-54 T 11-10-2018 IPR006879 Carbohydrate deacetylase YdjC-like AL543_02690 ed3241e7822b7407067dc558bb09cd83 605 Pfam PF10145 Phage-related minor tail protein 87 284 9.7E-29 T 11-10-2018 IPR010090 Phage tail tape measure protein AL543_02690 ed3241e7822b7407067dc558bb09cd83 605 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 49 387 2.7E-19 T 11-10-2018 IPR010090 Phage tail tape measure protein AL543_07710 da4e700c82d087f28d460115502d3984 160 Pfam PF11075 Protein of unknown function VcgC/VcgE (DUF2780) 12 156 4.5E-34 T 11-10-2018 IPR021302 Protein of unknown function DUF2780, VcgC/VcgE AL543_07865 e043c9b188a5f3c3c5b225ab0b08d08a 622 Pfam PF00884 Sulfatase 262 537 1.6E-31 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 AL543_07865 e043c9b188a5f3c3c5b225ab0b08d08a 622 Pfam PF11893 Domain of unknown function (DUF3413) 17 254 3.7E-63 T 11-10-2018 IPR024588 Inner membrane protein YejM, N-terminal AL543_07865 e043c9b188a5f3c3c5b225ab0b08d08a 622 Gene3D G3DSA:3.40.720.10 254 548 5.5E-57 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AL543_07865 e043c9b188a5f3c3c5b225ab0b08d08a 622 SUPERFAMILY SSF53649 259 588 8.11E-60 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AL543_07865 e043c9b188a5f3c3c5b225ab0b08d08a 622 PIRSF PIRSF004950 10 622 2.0E-225 T 11-10-2018 IPR012159 Inner membrane protein YejM AL543_08975 5bde54e6a958396752f73eea352f4d63 215 SUPERFAMILY SSF52540 15 198 3.62E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_08975 5bde54e6a958396752f73eea352f4d63 215 Gene3D G3DSA:3.40.50.300 3 202 1.7E-56 T 11-10-2018 AL543_08975 5bde54e6a958396752f73eea352f4d63 215 Pfam PF01926 50S ribosome-binding GTPase 29 147 3.9E-19 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AL543_08975 5bde54e6a958396752f73eea352f4d63 215 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 15 198 26.804 T 11-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 AL543_08975 5bde54e6a958396752f73eea352f4d63 215 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 11 194 1.0E-71 T 11-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 AL543_12045 64803967e3f14394d7fe180cf748421c 288 PIRSF PIRSF005917 1 288 1.0E-107 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 AL543_12045 64803967e3f14394d7fe180cf748421c 288 Gene3D G3DSA:3.30.950.10 121 241 5.2E-44 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 AL543_12045 64803967e3f14394d7fe180cf748421c 288 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 284 2.9E-101 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 AL543_12045 64803967e3f14394d7fe180cf748421c 288 SUPERFAMILY SSF53790 12 232 3.79E-85 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 AL543_12045 64803967e3f14394d7fe180cf748421c 288 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 13 213 5.6E-28 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 AL543_12045 64803967e3f14394d7fe180cf748421c 288 Gene3D G3DSA:3.40.1010.10 2 120 1.7E-46 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 AL543_12045 64803967e3f14394d7fe180cf748421c 288 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 11-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 AL543_12045 64803967e3f14394d7fe180cf748421c 288 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 38.149 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 AL543_10130 e648adac77e5614b56fa930e78d4c173 481 SUPERFAMILY SSF55604 9 80 3.27E-17 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AL543_10130 e648adac77e5614b56fa930e78d4c173 481 Pfam PF00367 phosphotransferase system, EIIB 11 43 1.3E-9 T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL543_10130 e648adac77e5614b56fa930e78d4c173 481 Pfam PF02378 Phosphotransferase system, EIIC 127 408 1.3E-30 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL543_10130 e648adac77e5614b56fa930e78d4c173 481 Gene3D G3DSA:3.30.1360.60 3 79 2.1E-18 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AL543_10130 e648adac77e5614b56fa930e78d4c173 481 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL543_13805 84177f0321973aca95053e6d241b9c1a 439 Pfam PF04932 O-Antigen ligase 217 358 2.4E-20 T 11-10-2018 IPR007016 O-antigen ligase-related AL543_03200 270a30b53ef8860f59ba5195eca069fc 102 Pfam PF00034 Cytochrome c 32 98 1.5E-6 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL543_03200 270a30b53ef8860f59ba5195eca069fc 102 SUPERFAMILY SSF46626 12 100 4.07E-19 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL543_03200 270a30b53ef8860f59ba5195eca069fc 102 Gene3D G3DSA:1.10.760.10 20 102 3.3E-23 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL543_20520 df007aa32788c41c6965ae45a31548aa 247 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 11 246 1.2E-105 T 11-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL543_20520 df007aa32788c41c6965ae45a31548aa 247 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 10 230 1.5E-81 T 11-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL543_20520 df007aa32788c41c6965ae45a31548aa 247 SUPERFAMILY SSF53098 10 190 3.8E-56 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_20520 df007aa32788c41c6965ae45a31548aa 247 Gene3D G3DSA:3.30.420.10 4 195 1.5E-59 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AL543_20520 df007aa32788c41c6965ae45a31548aa 247 SMART SM00479 11 189 6.7E-51 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL543_20520 df007aa32788c41c6965ae45a31548aa 247 Pfam PF00929 Exonuclease 13 180 1.7E-40 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL543_20485 e751cb81a916f214ffe6eb2b074cbf13 526 PIRSF PIRSF006446 354 522 2.7E-31 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AL543_20485 e751cb81a916f214ffe6eb2b074cbf13 526 PIRSF PIRSF006446 1 326 3.3E-114 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AL543_20485 e751cb81a916f214ffe6eb2b074cbf13 526 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 8 502 1.5E-173 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AL543_10455 c69d3b14b822d653606d1430ff8567a5 172 Gene3D G3DSA:3.40.50.300 2 168 3.5E-65 T 11-10-2018 AL543_10455 c69d3b14b822d653606d1430ff8567a5 172 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 6 160 7.4E-64 T 11-10-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 AL543_10455 c69d3b14b822d653606d1430ff8567a5 172 Pfam PF01202 Shikimate kinase 13 128 1.4E-13 T 11-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AL543_10455 c69d3b14b822d653606d1430ff8567a5 172 SUPERFAMILY SSF52540 4 166 2.39E-25 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_00885 5e2207d4deb1794785eb5ebe2e3b21be 298 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 291 1.6E-17 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL543_00885 5e2207d4deb1794785eb5ebe2e3b21be 298 SUPERFAMILY SSF161098 63 281 8.11E-39 T 11-10-2018 IPR035906 MetI-like superfamily AL543_00885 5e2207d4deb1794785eb5ebe2e3b21be 298 Gene3D G3DSA:1.10.3720.10 57 294 4.6E-49 T 11-10-2018 IPR035906 MetI-like superfamily AL543_00885 5e2207d4deb1794785eb5ebe2e3b21be 298 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 62 131 7.6E-14 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 AL543_14800 9c70c39cf464b83dbdba210b1a254c02 398 Gene3D G3DSA:3.30.420.40 2 194 6.5E-76 T 11-10-2018 AL543_14800 9c70c39cf464b83dbdba210b1a254c02 398 PIRSF PIRSF000722 1 398 9.2E-150 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL543_14800 9c70c39cf464b83dbdba210b1a254c02 398 SUPERFAMILY SSF53067 3 195 1.29E-66 T 11-10-2018 AL543_14800 9c70c39cf464b83dbdba210b1a254c02 398 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 11-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL543_14800 9c70c39cf464b83dbdba210b1a254c02 398 TIGRFAM TIGR00016 ackA: acetate kinase 2 396 5.6E-174 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL543_14800 9c70c39cf464b83dbdba210b1a254c02 398 PRINTS PR00471 Acetate kinase family signature 172 185 2.7E-45 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL543_14800 9c70c39cf464b83dbdba210b1a254c02 398 PRINTS PR00471 Acetate kinase family signature 298 311 2.7E-45 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL543_14800 9c70c39cf464b83dbdba210b1a254c02 398 PRINTS PR00471 Acetate kinase family signature 377 389 2.7E-45 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL543_14800 9c70c39cf464b83dbdba210b1a254c02 398 PRINTS PR00471 Acetate kinase family signature 321 337 2.7E-45 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL543_14800 9c70c39cf464b83dbdba210b1a254c02 398 PRINTS PR00471 Acetate kinase family signature 5 16 2.7E-45 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL543_14800 9c70c39cf464b83dbdba210b1a254c02 398 PRINTS PR00471 Acetate kinase family signature 202 223 2.7E-45 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL543_14800 9c70c39cf464b83dbdba210b1a254c02 398 SUPERFAMILY SSF53067 155 396 1.3E-87 T 11-10-2018 AL543_14800 9c70c39cf464b83dbdba210b1a254c02 398 Pfam PF00871 Acetokinase family 5 390 1.5E-168 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL543_14800 9c70c39cf464b83dbdba210b1a254c02 398 Hamap MF_00020 Acetate kinase [ackA]. 1 398 192.759 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL543_14800 9c70c39cf464b83dbdba210b1a254c02 398 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 202 219 - T 11-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL543_14800 9c70c39cf464b83dbdba210b1a254c02 398 Gene3D G3DSA:3.30.420.40 195 397 4.8E-83 T 11-10-2018 AL543_03595 e5fe66fa6c59eb46467c34251f78204c 108 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 94 6.4E-22 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL543_03595 e5fe66fa6c59eb46467c34251f78204c 108 SUPERFAMILY SSF52794 1 100 3.14E-32 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 AL543_03595 e5fe66fa6c59eb46467c34251f78204c 108 Gene3D G3DSA:3.40.50.2300 1 107 7.8E-35 T 11-10-2018 AL543_06365 34609482a658939eebfa219aded73ef4 205 SUPERFAMILY SSF52317 7 191 6.42E-44 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL543_06365 34609482a658939eebfa219aded73ef4 205 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 8 185 2.3E-63 T 11-10-2018 IPR006287 Protein/nucleic acid deglycase DJ-1 Reactome: R-HSA-3899300 AL543_06365 34609482a658939eebfa219aded73ef4 205 Gene3D G3DSA:3.40.50.880 2 205 1.4E-58 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL543_06365 34609482a658939eebfa219aded73ef4 205 Pfam PF01965 DJ-1/PfpI family 7 172 6.8E-35 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 AL543_00265 08007759d2150fea881f0b7684532a5c 322 SUPERFAMILY SSF46785 24 72 1.0E-5 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_00265 08007759d2150fea881f0b7684532a5c 322 Gene3D G3DSA:1.10.10.10 8 109 3.0E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_00265 08007759d2150fea881f0b7684532a5c 322 Pfam PF13730 Helix-turn-helix domain 17 67 2.1E-13 T 11-10-2018 AL543_17630 a3ffe397e1aac0d07f2ca7eea5c9a95b 215 SUPERFAMILY SSF52540 4 201 8.46E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_17630 a3ffe397e1aac0d07f2ca7eea5c9a95b 215 Pfam PF00005 ABC transporter 20 163 1.0E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_17630 a3ffe397e1aac0d07f2ca7eea5c9a95b 215 SMART SM00382 28 212 3.7E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_17630 a3ffe397e1aac0d07f2ca7eea5c9a95b 215 Gene3D G3DSA:3.40.50.300 1 208 3.1E-51 T 11-10-2018 AL543_17290 205d8d1a527b837e5ba053c8b62cfb90 472 Pfam PF02321 Outer membrane efflux protein 26 243 3.0E-21 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AL543_17290 205d8d1a527b837e5ba053c8b62cfb90 472 Pfam PF02321 Outer membrane efflux protein 264 445 5.6E-24 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AL543_17290 205d8d1a527b837e5ba053c8b62cfb90 472 Gene3D G3DSA:1.20.1600.10 21 455 6.9E-60 T 11-10-2018 AL543_17290 205d8d1a527b837e5ba053c8b62cfb90 472 SUPERFAMILY SSF56954 2 446 2.22E-67 T 11-10-2018 AL543_15290 d4c7358d5af7cc35f54eba47ae1a5be7 231 Gene3D G3DSA:3.40.1550.10 11 177 1.5E-19 T 11-10-2018 IPR028976 CheC-like superfamily AL543_15290 d4c7358d5af7cc35f54eba47ae1a5be7 231 Pfam PF11813 Protein of unknown function (DUF3334) 7 231 1.2E-115 T 11-10-2018 IPR024513 Protein of unknown function DUF3334 AL543_15290 d4c7358d5af7cc35f54eba47ae1a5be7 231 SUPERFAMILY SSF103039 14 177 1.83E-24 T 11-10-2018 IPR028976 CheC-like superfamily AL543_07740 756d9a7dbdd6c76983597e7873ac5986 37 Pfam PF00444 Ribosomal protein L36 1 37 9.4E-19 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_07740 756d9a7dbdd6c76983597e7873ac5986 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.137 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_07740 756d9a7dbdd6c76983597e7873ac5986 37 SUPERFAMILY SSF57840 1 37 1.02E-16 T 11-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_07740 756d9a7dbdd6c76983597e7873ac5986 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 4.0E-23 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_07740 756d9a7dbdd6c76983597e7873ac5986 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_07740 756d9a7dbdd6c76983597e7873ac5986 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 37 3.0E-9 T 11-10-2018 AL543_20090 fa6368aed72640fba51fdb2370c5fce9 78 Pfam PF01206 Sulfurtransferase TusA 5 55 1.4E-12 T 11-10-2018 IPR001455 TusA-like domain AL543_20090 fa6368aed72640fba51fdb2370c5fce9 78 Gene3D G3DSA:3.30.110.40 2 73 3.7E-11 T 11-10-2018 IPR036868 TusA-like domain superfamily AL543_20090 fa6368aed72640fba51fdb2370c5fce9 78 SUPERFAMILY SSF64307 4 64 3.27E-12 T 11-10-2018 IPR036868 TusA-like domain superfamily AL543_08425 66584902722403ab2ca05d12b4a71400 773 SUPERFAMILY SSF47781 470 557 3.22E-28 T 11-10-2018 IPR010994 RuvA domain 2-like AL543_08425 66584902722403ab2ca05d12b4a71400 773 Gene3D G3DSA:3.30.420.140 325 451 2.8E-160 T 11-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 AL543_08425 66584902722403ab2ca05d12b4a71400 773 SMART SM00732 326 424 1.6E-39 T 11-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 AL543_08425 66584902722403ab2ca05d12b4a71400 773 SUPERFAMILY SSF47781 560 632 1.96E-19 T 11-10-2018 IPR010994 RuvA domain 2-like AL543_08425 66584902722403ab2ca05d12b4a71400 773 SUPERFAMILY SSF53098 322 469 4.55E-51 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_08425 66584902722403ab2ca05d12b4a71400 773 Pfam PF12836 Helix-hairpin-helix motif 491 555 3.6E-29 T 11-10-2018 AL543_08425 66584902722403ab2ca05d12b4a71400 773 Gene3D G3DSA:1.10.3500.10 112 498 2.8E-160 T 11-10-2018 IPR023323 Tex-like domain superfamily AL543_08425 66584902722403ab2ca05d12b4a71400 773 Gene3D G3DSA:1.10.10.650 1 109 3.0E-41 T 11-10-2018 IPR023319 Tex-like protein, HTH domain superfamily AL543_08425 66584902722403ab2ca05d12b4a71400 773 Pfam PF09371 Tex-like protein N-terminal domain 9 193 2.3E-71 T 11-10-2018 IPR018974 Tex-like protein, N-terminal AL543_08425 66584902722403ab2ca05d12b4a71400 773 SUPERFAMILY SSF50249 638 723 2.83E-24 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL543_08425 66584902722403ab2ca05d12b4a71400 773 Gene3D G3DSA:2.40.50.140 631 725 1.1E-28 T 11-10-2018 AL543_08425 66584902722403ab2ca05d12b4a71400 773 Pfam PF16921 Tex protein YqgF-like domain 327 451 6.8E-56 T 11-10-2018 IPR032639 Tex protein, YqgF-like domain AL543_08425 66584902722403ab2ca05d12b4a71400 773 SMART SM00316 649 720 6.0E-25 T 11-10-2018 IPR022967 RNA-binding domain, S1 AL543_08425 66584902722403ab2ca05d12b4a71400 773 SUPERFAMILY SSF158832 4 321 4.45E-122 T 11-10-2018 AL543_08425 66584902722403ab2ca05d12b4a71400 773 Gene3D G3DSA:1.10.150.310 499 630 2.4E-51 T 11-10-2018 AL543_08425 66584902722403ab2ca05d12b4a71400 773 Pfam PF00575 S1 RNA binding domain 648 720 2.9E-21 T 11-10-2018 IPR003029 S1 domain GO:0003676 AL543_10490 beb956abf1408c77221a2e6c1dd3c8bd 152 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 108 125 - T 11-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AL543_10490 beb956abf1408c77221a2e6c1dd3c8bd 152 Gene3D G3DSA:2.40.50.100 74 152 5.5E-32 T 11-10-2018 AL543_10490 beb956abf1408c77221a2e6c1dd3c8bd 152 SUPERFAMILY SSF51230 77 152 4.71E-26 T 11-10-2018 IPR011053 Single hybrid motif AL543_10490 beb956abf1408c77221a2e6c1dd3c8bd 152 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 152 2.1E-62 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AL543_10490 beb956abf1408c77221a2e6c1dd3c8bd 152 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 81 94 1.3E-18 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AL543_10490 beb956abf1408c77221a2e6c1dd3c8bd 152 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 98 112 1.3E-18 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AL543_10490 beb956abf1408c77221a2e6c1dd3c8bd 152 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 113 126 1.3E-18 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AL543_10490 beb956abf1408c77221a2e6c1dd3c8bd 152 Pfam PF00364 Biotin-requiring enzyme 78 151 1.2E-24 T 11-10-2018 IPR000089 Biotin/lipoyl attachment AL543_06895 ee3be4cb875d6583989a87731b24f898 172 Gene3D G3DSA:3.40.50.360 1 172 3.0E-49 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL543_06895 ee3be4cb875d6583989a87731b24f898 172 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 11-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 AL543_06895 ee3be4cb875d6583989a87731b24f898 172 TIGRFAM TIGR01752 flav_long: flavodoxin 2 167 3.0E-67 T 11-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 AL543_06895 ee3be4cb875d6583989a87731b24f898 172 Pfam PF00258 Flavodoxin 5 160 1.7E-26 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AL543_06895 ee3be4cb875d6583989a87731b24f898 172 SUPERFAMILY SSF52218 1 168 1.45E-48 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL543_06895 ee3be4cb875d6583989a87731b24f898 172 PIRSF PIRSF038996 1 171 5.2E-57 T 11-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 AL543_14185 0f2f7c4f4cb9396b9cf450de2e93173c 209 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 2 194 27.501 T 11-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 AL543_14185 0f2f7c4f4cb9396b9cf450de2e93173c 209 Pfam PF04205 FMN-binding domain 100 189 1.7E-20 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AL543_14185 0f2f7c4f4cb9396b9cf450de2e93173c 209 PIRSF PIRSF006091 1 206 1.1E-81 T 11-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 AL543_14185 0f2f7c4f4cb9396b9cf450de2e93173c 209 SMART SM00900 100 192 3.3E-35 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AL543_14185 0f2f7c4f4cb9396b9cf450de2e93173c 209 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 9 193 2.3E-72 T 11-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 AL543_03150 ef265b54734aec53b561894f05239c9b 309 SUPERFAMILY SSF50891 191 292 8.72E-10 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily AL543_03150 ef265b54734aec53b561894f05239c9b 309 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 4 290 1.3E-82 T 11-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B AL543_03150 ef265b54734aec53b561894f05239c9b 309 Gene3D G3DSA:2.40.100.10 180 307 2.2E-41 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily AL543_03150 ef265b54734aec53b561894f05239c9b 309 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 27 289 9.4E-87 T 11-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B AL543_03150 ef265b54734aec53b561894f05239c9b 309 SMART SM00797 26 306 2.3E-136 T 11-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B AL543_00685 8ce759db76c6c9a0b4b74232ff18a25a 306 PIRSF PIRSF002867 1 299 1.5E-88 T 11-10-2018 IPR024181 Chemotaxis response regulator CheV AL543_00685 8ce759db76c6c9a0b4b74232ff18a25a 306 Pfam PF01584 CheW-like domain 14 150 4.6E-31 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AL543_00685 8ce759db76c6c9a0b4b74232ff18a25a 306 Pfam PF00072 Response regulator receiver domain 176 290 2.4E-15 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_00685 8ce759db76c6c9a0b4b74232ff18a25a 306 SMART SM00260 11 148 6.0E-18 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AL543_00685 8ce759db76c6c9a0b4b74232ff18a25a 306 SUPERFAMILY SSF52172 172 298 4.55E-22 T 11-10-2018 IPR011006 CheY-like superfamily AL543_00685 8ce759db76c6c9a0b4b74232ff18a25a 306 SUPERFAMILY SSF50341 11 153 1.44E-29 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AL543_00685 8ce759db76c6c9a0b4b74232ff18a25a 306 Gene3D G3DSA:2.40.50.180 32 147 1.2E-24 T 11-10-2018 AL543_00685 8ce759db76c6c9a0b4b74232ff18a25a 306 Gene3D G3DSA:3.40.50.2300 164 302 3.8E-23 T 11-10-2018 AL543_00685 8ce759db76c6c9a0b4b74232ff18a25a 306 Gene3D G3DSA:2.30.30.40 20 142 1.2E-24 T 11-10-2018 AL543_00685 8ce759db76c6c9a0b4b74232ff18a25a 306 SMART SM00448 174 291 8.1E-14 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_17730 214cd620d7ce5fb5f81263ee163efbf2 402 Pfam PF11449 Putative, 10TM heavy-metal exporter 40 400 2.4E-153 T 11-10-2018 IPR021552 Putative, 10TM heavy-metal exporter AL543_02775 484ffeb69f43382cb56bc20a2ed3102a 323 Gene3D G3DSA:3.40.50.2300 135 313 8.8E-13 T 11-10-2018 AL543_02775 484ffeb69f43382cb56bc20a2ed3102a 323 Gene3D G3DSA:3.40.50.2300 67 298 8.8E-13 T 11-10-2018 AL543_14025 bd9631e7863c0b657c9ef76d096e4bfd 293 SUPERFAMILY SSF48435 99 246 4.97E-5 T 11-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 AL543_14025 bd9631e7863c0b657c9ef76d096e4bfd 293 Gene3D G3DSA:1.25.40.10 206 293 1.9E-20 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_14025 bd9631e7863c0b657c9ef76d096e4bfd 293 Pfam PF00085 Thioredoxin 16 118 3.7E-14 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 AL543_14025 bd9631e7863c0b657c9ef76d096e4bfd 293 Pfam PF14559 Tetratricopeptide repeat 136 199 1.2E-10 T 11-10-2018 AL543_14025 bd9631e7863c0b657c9ef76d096e4bfd 293 Gene3D G3DSA:3.40.30.10 8 120 1.1E-23 T 11-10-2018 AL543_14025 bd9631e7863c0b657c9ef76d096e4bfd 293 Gene3D G3DSA:1.25.40.10 121 205 1.4E-20 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_14025 bd9631e7863c0b657c9ef76d096e4bfd 293 Pfam PF14561 Tetratricopeptide repeat 204 293 2.1E-25 T 11-10-2018 AL543_14025 bd9631e7863c0b657c9ef76d096e4bfd 293 SUPERFAMILY SSF52833 8 123 2.67E-26 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL543_20880 55050e2020ddf83506557b61a79e859b 75 Pfam PF14375 Cysteine-rich CWC 13 66 5.5E-11 T 11-10-2018 IPR032720 Cysteine-rich CWC AL543_13505 736cc904f52cb91d46615a3cc561c7cb 571 Gene3D G3DSA:3.30.930.10 11 465 1.7E-235 T 11-10-2018 AL543_13505 736cc904f52cb91d46615a3cc561c7cb 571 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 567 4.3E-248 T 11-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AL543_13505 736cc904f52cb91d46615a3cc561c7cb 571 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 7.0E-42 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL543_13505 736cc904f52cb91d46615a3cc561c7cb 571 SUPERFAMILY SSF55826 218 390 6.41E-30 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AL543_13505 736cc904f52cb91d46615a3cc561c7cb 571 SUPERFAMILY SSF52954 463 570 7.4E-34 T 11-10-2018 AL543_13505 736cc904f52cb91d46615a3cc561c7cb 571 Pfam PF04073 Aminoacyl-tRNA editing domain 257 378 8.2E-25 T 11-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AL543_13505 736cc904f52cb91d46615a3cc561c7cb 571 Gene3D G3DSA:3.90.960.10 240 389 1.7E-235 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AL543_13505 736cc904f52cb91d46615a3cc561c7cb 571 Gene3D G3DSA:3.40.50.800 4 554 1.7E-235 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily AL543_13505 736cc904f52cb91d46615a3cc561c7cb 571 PIRSF PIRSF001535 1 571 2.0E-266 T 11-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AL543_13505 736cc904f52cb91d46615a3cc561c7cb 571 Pfam PF03129 Anticodon binding domain 475 568 3.1E-24 T 11-10-2018 IPR004154 Anticodon-binding AL543_13505 736cc904f52cb91d46615a3cc561c7cb 571 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 41.164 T 11-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AL543_13505 736cc904f52cb91d46615a3cc561c7cb 571 SUPERFAMILY SSF55681 10 478 3.13E-99 T 11-10-2018 AL543_13505 736cc904f52cb91d46615a3cc561c7cb 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 2.4E-16 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AL543_13505 736cc904f52cb91d46615a3cc561c7cb 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 2.4E-16 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AL543_13505 736cc904f52cb91d46615a3cc561c7cb 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 2.4E-16 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AL543_13505 736cc904f52cb91d46615a3cc561c7cb 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 2.4E-16 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AL543_12285 63851d7bfeb3e2b93d8f50ec9992bfb1 98 SMART SM01103 3 86 3.0E-40 T 11-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 AL543_12285 63851d7bfeb3e2b93d8f50ec9992bfb1 98 Gene3D G3DSA:3.30.110.60 1 98 2.1E-36 T 11-10-2018 IPR035920 YhbY-like superfamily AL543_12285 63851d7bfeb3e2b93d8f50ec9992bfb1 98 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 98 1.0E-44 T 11-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 AL543_12285 63851d7bfeb3e2b93d8f50ec9992bfb1 98 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 97 6.3E-37 T 11-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 AL543_12285 63851d7bfeb3e2b93d8f50ec9992bfb1 98 SUPERFAMILY SSF75471 1 94 3.4E-30 T 11-10-2018 IPR035920 YhbY-like superfamily AL543_12285 63851d7bfeb3e2b93d8f50ec9992bfb1 98 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 7.0E-21 T 11-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 AL543_04290 855a85bb02e7664ca924ec02938e184f 562 Pfam PF00664 ABC transporter transmembrane region 55 275 2.0E-12 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AL543_04290 855a85bb02e7664ca924ec02938e184f 562 SUPERFAMILY SSF90123 24 311 1.22E-32 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AL543_04290 855a85bb02e7664ca924ec02938e184f 562 SMART SM00382 349 540 1.9E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_04290 855a85bb02e7664ca924ec02938e184f 562 Pfam PF00005 ABC transporter 340 488 4.2E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_04290 855a85bb02e7664ca924ec02938e184f 562 Gene3D G3DSA:3.40.50.300 314 559 2.7E-79 T 11-10-2018 AL543_04290 855a85bb02e7664ca924ec02938e184f 562 Gene3D G3DSA:1.20.1560.10 5 313 2.2E-26 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AL543_04290 855a85bb02e7664ca924ec02938e184f 562 ProSitePatterns PS00211 ABC transporters family signature. 461 475 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_04290 855a85bb02e7664ca924ec02938e184f 562 SUPERFAMILY SSF52540 322 557 7.03E-75 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_15640 69844092f46d6e553601337b88615938 70 Gene3D G3DSA:2.40.50.140 2 69 6.2E-30 T 11-10-2018 AL543_15640 69844092f46d6e553601337b88615938 70 SMART SM00357 6 70 2.6E-29 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 AL543_15640 69844092f46d6e553601337b88615938 70 Pfam PF00313 'Cold-shock' DNA-binding domain 6 69 1.9E-30 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL543_15640 69844092f46d6e553601337b88615938 70 SUPERFAMILY SSF50249 4 69 1.54E-25 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL543_15640 69844092f46d6e553601337b88615938 70 PRINTS PR00050 Cold shock protein signature 7 22 3.2E-16 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL543_15640 69844092f46d6e553601337b88615938 70 PRINTS PR00050 Cold shock protein signature 28 37 3.2E-16 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL543_15640 69844092f46d6e553601337b88615938 70 PRINTS PR00050 Cold shock protein signature 43 61 3.2E-16 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL543_15640 69844092f46d6e553601337b88615938 70 PIRSF PIRSF002599 1 70 8.2E-25 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 AL543_15640 69844092f46d6e553601337b88615938 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 11-10-2018 IPR019844 Cold-shock conserved site AL543_15595 fdf95c008a43d8673442e42a5ed32e01 207 Gene3D G3DSA:1.25.40.10 51 112 8.2E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_15595 fdf95c008a43d8673442e42a5ed32e01 207 Gene3D G3DSA:1.25.40.10 113 201 1.5E-19 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_15595 fdf95c008a43d8673442e42a5ed32e01 207 SUPERFAMILY SSF48452 59 176 9.32E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_13440 b3616ccf990463d504efe966c5fa2fed 196 PIRSF PIRSF004525 3 196 7.6E-16 T 11-10-2018 IPR016419 Prepilin peptidase-dependent protein B, predicted AL543_13440 b3616ccf990463d504efe966c5fa2fed 196 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 30 3.3E-5 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL543_06665 917f8a895aa709ff0cf45e3a53847bb1 579 SUPERFAMILY SSF55785 152 249 6.46E-6 T 11-10-2018 IPR035965 PAS domain superfamily AL543_06665 917f8a895aa709ff0cf45e3a53847bb1 579 SMART SM00267 399 575 9.9E-72 T 11-10-2018 IPR000160 GGDEF domain AL543_06665 917f8a895aa709ff0cf45e3a53847bb1 579 SMART SM00091 156 221 100.0 T 11-10-2018 IPR000014 PAS domain AL543_06665 917f8a895aa709ff0cf45e3a53847bb1 579 SMART SM00091 277 344 0.0014 T 11-10-2018 IPR000014 PAS domain AL543_06665 917f8a895aa709ff0cf45e3a53847bb1 579 SMART SM00091 36 100 32.0 T 11-10-2018 IPR000014 PAS domain AL543_06665 917f8a895aa709ff0cf45e3a53847bb1 579 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 406 573 8.6E-48 T 11-10-2018 IPR000160 GGDEF domain AL543_06665 917f8a895aa709ff0cf45e3a53847bb1 579 Gene3D G3DSA:3.30.450.20 261 406 4.7E-25 T 11-10-2018 AL543_06665 917f8a895aa709ff0cf45e3a53847bb1 579 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 274 399 1.4E-14 T 11-10-2018 IPR000014 PAS domain AL543_06665 917f8a895aa709ff0cf45e3a53847bb1 579 SMART SM00086 350 392 0.0049 T 11-10-2018 IPR001610 PAC motif AL543_06665 917f8a895aa709ff0cf45e3a53847bb1 579 SMART SM00086 209 251 390.0 T 11-10-2018 IPR001610 PAC motif AL543_06665 917f8a895aa709ff0cf45e3a53847bb1 579 Pfam PF08448 PAS fold 283 393 1.6E-17 T 11-10-2018 IPR013656 PAS fold-4 AL543_06665 917f8a895aa709ff0cf45e3a53847bb1 579 Gene3D G3DSA:3.30.70.270 412 579 4.1E-52 T 11-10-2018 AL543_06665 917f8a895aa709ff0cf45e3a53847bb1 579 SUPERFAMILY SSF55073 415 577 1.26E-46 T 11-10-2018 IPR029787 Nucleotide cyclase AL543_06665 917f8a895aa709ff0cf45e3a53847bb1 579 Pfam PF13188 PAS domain 40 72 0.0094 T 11-10-2018 IPR000014 PAS domain AL543_06665 917f8a895aa709ff0cf45e3a53847bb1 579 Pfam PF00990 Diguanylate cyclase, GGDEF domain 411 571 1.1E-49 T 11-10-2018 IPR000160 GGDEF domain AL543_06665 917f8a895aa709ff0cf45e3a53847bb1 579 SUPERFAMILY SSF55785 264 390 3.14E-20 T 11-10-2018 IPR035965 PAS domain superfamily AL543_17925 057614877b5186df09e747666bfb3503 268 Pfam PF00561 alpha/beta hydrolase fold 22 124 4.5E-21 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AL543_17925 057614877b5186df09e747666bfb3503 268 Gene3D G3DSA:3.40.50.1820 8 265 1.3E-42 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL543_17925 057614877b5186df09e747666bfb3503 268 SUPERFAMILY SSF53474 18 263 2.16E-45 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL543_17925 057614877b5186df09e747666bfb3503 268 PRINTS PR00412 Epoxide hydrolase signature 208 224 4.2E-5 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL543_17925 057614877b5186df09e747666bfb3503 268 PRINTS PR00412 Epoxide hydrolase signature 240 262 4.2E-5 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL543_17925 057614877b5186df09e747666bfb3503 268 PRINTS PR00412 Epoxide hydrolase signature 27 45 4.2E-5 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL543_11250 832cdcdc0917177b295953d323cdf734 275 Pfam PF00795 Carbon-nitrogen hydrolase 3 237 1.1E-51 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 AL543_11250 832cdcdc0917177b295953d323cdf734 275 Gene3D G3DSA:3.60.110.10 1 269 4.7E-87 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AL543_11250 832cdcdc0917177b295953d323cdf734 275 SUPERFAMILY SSF56317 3 263 5.1E-78 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AL543_11250 832cdcdc0917177b295953d323cdf734 275 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 149 169 - T 11-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site AL543_02795 47166cdc2b65deac8cd91271d3083374 357 Gene3D G3DSA:3.30.70.270 163 334 7.8E-46 T 11-10-2018 AL543_02795 47166cdc2b65deac8cd91271d3083374 357 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 176 332 4.5E-41 T 11-10-2018 IPR000160 GGDEF domain AL543_02795 47166cdc2b65deac8cd91271d3083374 357 Pfam PF00990 Diguanylate cyclase, GGDEF domain 178 330 1.7E-36 T 11-10-2018 IPR000160 GGDEF domain AL543_02795 47166cdc2b65deac8cd91271d3083374 357 SUPERFAMILY SSF55073 182 332 2.12E-39 T 11-10-2018 IPR029787 Nucleotide cyclase AL543_02795 47166cdc2b65deac8cd91271d3083374 357 SMART SM00267 166 334 2.8E-46 T 11-10-2018 IPR000160 GGDEF domain AL543_19290 9ba7895aeede2d4be8f4591132a1a850 105 Gene3D G3DSA:1.10.3990.20 8 103 3.2E-30 T 11-10-2018 IPR038268 Ribbon-helix-helix domain superfamily AL543_19290 9ba7895aeede2d4be8f4591132a1a850 105 Pfam PF13467 Ribbon-helix-helix domain 16 83 3.9E-24 T 11-10-2018 IPR027373 Ribbon-helix-helix domain AL543_17415 d64ec5c1e25faac1a1ff84ff80b38767 458 TIGRFAM TIGR00797 matE: MATE efflux family protein 25 422 1.9E-61 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL543_17415 d64ec5c1e25faac1a1ff84ff80b38767 458 PIRSF PIRSF006603 8 458 1.5E-65 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL543_17415 d64ec5c1e25faac1a1ff84ff80b38767 458 Pfam PF01554 MatE 252 413 2.6E-16 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL543_17415 d64ec5c1e25faac1a1ff84ff80b38767 458 Pfam PF01554 MatE 25 185 1.4E-27 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL543_18260 f165399970f81980ce62f96a085ce3de 632 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 5 131 6.8E-43 T 11-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 AL543_18260 f165399970f81980ce62f96a085ce3de 632 SUPERFAMILY SSF55804 1 146 1.31E-39 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AL543_18260 f165399970f81980ce62f96a085ce3de 632 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 276 617 2.4E-85 T 11-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 AL543_18260 f165399970f81980ce62f96a085ce3de 632 Gene3D G3DSA:3.40.50.2300 150 262 1.0E-38 T 11-10-2018 AL543_18260 f165399970f81980ce62f96a085ce3de 632 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 164 246 1.1E-29 T 11-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 AL543_18260 f165399970f81980ce62f96a085ce3de 632 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 147 6.7E-36 T 11-10-2018 IPR002178 PTS EIIA type-2 domain AL543_18260 f165399970f81980ce62f96a085ce3de 632 Gene3D G3DSA:3.40.930.10 1 147 5.8E-43 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AL543_18260 f165399970f81980ce62f96a085ce3de 632 Pfam PF02378 Phosphotransferase system, EIIC 289 564 9.7E-15 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL543_18260 f165399970f81980ce62f96a085ce3de 632 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 166 255 1.1E-14 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL543_18260 f165399970f81980ce62f96a085ce3de 632 SUPERFAMILY SSF52794 163 258 1.08E-33 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 AL543_04525 82300e77fcf432ea4ef78da3c951ed89 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 4.2E-20 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_04525 82300e77fcf432ea4ef78da3c951ed89 301 Gene3D G3DSA:3.40.190.10 92 276 5.0E-35 T 11-10-2018 AL543_04525 82300e77fcf432ea4ef78da3c951ed89 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.2E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_04525 82300e77fcf432ea4ef78da3c951ed89 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.2E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_04525 82300e77fcf432ea4ef78da3c951ed89 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.2E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_04525 82300e77fcf432ea4ef78da3c951ed89 301 Gene3D G3DSA:3.40.190.10 165 268 5.0E-35 T 11-10-2018 AL543_04525 82300e77fcf432ea4ef78da3c951ed89 301 Gene3D G3DSA:1.10.10.10 3 88 6.9E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_04525 82300e77fcf432ea4ef78da3c951ed89 301 Pfam PF03466 LysR substrate binding domain 90 285 1.1E-41 T 11-10-2018 IPR005119 LysR, substrate-binding AL543_04525 82300e77fcf432ea4ef78da3c951ed89 301 SUPERFAMILY SSF46785 3 111 7.35E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_04525 82300e77fcf432ea4ef78da3c951ed89 301 SUPERFAMILY SSF53850 87 286 1.55E-36 T 11-10-2018 AL543_13170 1e29e9a7125adc3dab50b1a107c35b15 580 Gene3D G3DSA:2.10.10.20 443 488 4.6E-16 T 11-10-2018 AL543_13170 1e29e9a7125adc3dab50b1a107c35b15 580 SUPERFAMILY SSF51055 438 488 2.88E-16 T 11-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL543_13170 1e29e9a7125adc3dab50b1a107c35b15 580 SMART SM00495 445 487 3.2E-16 T 11-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL543_13170 1e29e9a7125adc3dab50b1a107c35b15 580 SMART SM00495 533 578 7.7E-5 T 11-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL543_13170 1e29e9a7125adc3dab50b1a107c35b15 580 SUPERFAMILY SSF53955 96 357 3.66E-53 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AL543_13170 1e29e9a7125adc3dab50b1a107c35b15 580 Gene3D G3DSA:1.10.530.10 112 353 1.1E-77 T 11-10-2018 AL543_13170 1e29e9a7125adc3dab50b1a107c35b15 580 Pfam PF02839 Carbohydrate binding domain 462 484 3.1E-5 T 11-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL543_13170 1e29e9a7125adc3dab50b1a107c35b15 580 Pfam PF00182 Chitinase class I 113 332 6.5E-31 T 11-10-2018 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AL543_13170 1e29e9a7125adc3dab50b1a107c35b15 580 Gene3D G3DSA:3.30.20.10 185 255 1.1E-77 T 11-10-2018 AL543_10880 f0faf4bd12a5a85c25e51641590ba907 240 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 30 143 8.0E-62 T 11-10-2018 IPR013559 YheO-like AL543_10880 f0faf4bd12a5a85c25e51641590ba907 240 Pfam PF13309 HTH domain 174 231 1.6E-17 T 11-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain AL543_10880 f0faf4bd12a5a85c25e51641590ba907 240 Pfam PF08348 YheO-like PAS domain 31 139 1.4E-35 T 11-10-2018 IPR013559 YheO-like AL543_01280 4bdd9cb3e99be8f73ed049820770983d 227 Pfam PF14518 Iron-containing redox enzyme 40 208 1.3E-24 T 11-10-2018 AL543_01280 4bdd9cb3e99be8f73ed049820770983d 227 SUPERFAMILY SSF48613 1 218 2.92E-62 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AL543_01280 4bdd9cb3e99be8f73ed049820770983d 227 SMART SM01236 74 175 1.0E-4 T 11-10-2018 AL543_01280 4bdd9cb3e99be8f73ed049820770983d 227 Gene3D G3DSA:1.20.910.10 3 225 2.6E-59 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AL543_03620 ca56078abc4a6ff10cbf1d96d7f5e237 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 184 0.0028 T 11-10-2018 AL543_03620 ca56078abc4a6ff10cbf1d96d7f5e237 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 243 6.6E-59 T 11-10-2018 AL543_03620 ca56078abc4a6ff10cbf1d96d7f5e237 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 1.4E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_03620 ca56078abc4a6ff10cbf1d96d7f5e237 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.4E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_03620 ca56078abc4a6ff10cbf1d96d7f5e237 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.4E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_03620 ca56078abc4a6ff10cbf1d96d7f5e237 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.4E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_03620 ca56078abc4a6ff10cbf1d96d7f5e237 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.4E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_03620 ca56078abc4a6ff10cbf1d96d7f5e237 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.4E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_03620 ca56078abc4a6ff10cbf1d96d7f5e237 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL543_03620 ca56078abc4a6ff10cbf1d96d7f5e237 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.8E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_03620 ca56078abc4a6ff10cbf1d96d7f5e237 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.8E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_03620 ca56078abc4a6ff10cbf1d96d7f5e237 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.8E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_03620 ca56078abc4a6ff10cbf1d96d7f5e237 246 Gene3D G3DSA:3.40.50.720 1 245 1.3E-75 T 11-10-2018 AL543_03620 ca56078abc4a6ff10cbf1d96d7f5e237 246 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 3 245 6.9E-123 T 11-10-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|MetaCyc: PWY-7948 AL543_03620 ca56078abc4a6ff10cbf1d96d7f5e237 246 SUPERFAMILY SSF51735 3 245 3.31E-79 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_17320 3d5050ac61220cf180ec9b746f8113a3 237 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 6 234 3.3E-75 T 11-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW AL543_17320 3d5050ac61220cf180ec9b746f8113a3 237 SMART SM00386 153 185 22.0 T 11-10-2018 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 AL543_17320 3d5050ac61220cf180ec9b746f8113a3 237 SMART SM00386 83 115 56.0 T 11-10-2018 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 AL543_17320 3d5050ac61220cf180ec9b746f8113a3 237 SMART SM00386 49 81 150.0 T 11-10-2018 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 AL543_17320 3d5050ac61220cf180ec9b746f8113a3 237 SUPERFAMILY SSF48452 25 170 1.01E-21 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_17320 3d5050ac61220cf180ec9b746f8113a3 237 Gene3D G3DSA:1.25.40.10 31 237 1.4E-35 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_17320 3d5050ac61220cf180ec9b746f8113a3 237 Pfam PF13424 Tetratricopeptide repeat 104 168 9.9E-10 T 11-10-2018 AL543_17320 3d5050ac61220cf180ec9b746f8113a3 237 SMART SM00028 103 136 17.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL543_17320 3d5050ac61220cf180ec9b746f8113a3 237 SMART SM00028 139 172 0.03 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL543_17320 3d5050ac61220cf180ec9b746f8113a3 237 SMART SM00028 35 68 0.25 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL543_17320 3d5050ac61220cf180ec9b746f8113a3 237 SMART SM00028 69 102 0.79 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL543_00990 39f765ddbe146776f3cba5cfce28b90d 212 Gene3D G3DSA:3.40.50.720 1 211 2.3E-52 T 11-10-2018 AL543_00990 39f765ddbe146776f3cba5cfce28b90d 212 Pfam PF13460 NAD(P)H-binding 7 197 5.1E-36 T 11-10-2018 IPR016040 NAD(P)-binding domain AL543_00990 39f765ddbe146776f3cba5cfce28b90d 212 SUPERFAMILY SSF51735 1 210 5.86E-35 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_01990 d7a815d9cd0ec8b7d141fd3272720f9c 363 Pfam PF02698 DUF218 domain 192 310 9.5E-20 T 11-10-2018 IPR003848 Domain of unknown function DUF218 AL543_01990 d7a815d9cd0ec8b7d141fd3272720f9c 363 SUPERFAMILY SSF48452 82 150 1.25E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_01990 d7a815d9cd0ec8b7d141fd3272720f9c 363 Gene3D G3DSA:1.25.40.10 68 201 4.2E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_19675 54313cb0bf8ec8871e0e2e54fb28ffa6 939 SUPERFAMILY SSF63411 484 707 5.68E-60 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL543_19675 54313cb0bf8ec8871e0e2e54fb28ffa6 939 Gene3D G3DSA:3.30.830.10 254 482 4.2E-73 T 11-10-2018 AL543_19675 54313cb0bf8ec8871e0e2e54fb28ffa6 939 Gene3D G3DSA:3.30.830.10 6 242 1.3E-85 T 11-10-2018 AL543_19675 54313cb0bf8ec8871e0e2e54fb28ffa6 939 Pfam PF00675 Insulinase (Peptidase family M16) 38 174 1.5E-35 T 11-10-2018 IPR011765 Peptidase M16, N-terminal AL543_19675 54313cb0bf8ec8871e0e2e54fb28ffa6 939 SUPERFAMILY SSF63411 717 927 3.14E-45 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL543_19675 54313cb0bf8ec8871e0e2e54fb28ffa6 939 Gene3D G3DSA:3.30.830.10 632 891 1.2E-109 T 11-10-2018 AL543_19675 54313cb0bf8ec8871e0e2e54fb28ffa6 939 Pfam PF16187 Middle or third domain of peptidase_M16 381 658 4.1E-84 T 11-10-2018 IPR032632 Peptidase M16, middle/third domain AL543_19675 54313cb0bf8ec8871e0e2e54fb28ffa6 939 Gene3D G3DSA:3.30.830.10 484 866 1.2E-109 T 11-10-2018 AL543_19675 54313cb0bf8ec8871e0e2e54fb28ffa6 939 Pfam PF05193 Peptidase M16 inactive domain 661 838 6.1E-13 T 11-10-2018 IPR007863 Peptidase M16, C-terminal AL543_19675 54313cb0bf8ec8871e0e2e54fb28ffa6 939 Pfam PF05193 Peptidase M16 inactive domain 198 370 9.5E-27 T 11-10-2018 IPR007863 Peptidase M16, C-terminal AL543_19675 54313cb0bf8ec8871e0e2e54fb28ffa6 939 SUPERFAMILY SSF63411 250 482 5.5E-76 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL543_19675 54313cb0bf8ec8871e0e2e54fb28ffa6 939 SUPERFAMILY SSF63411 18 242 6.23E-61 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL543_09675 232a11cea031ba2e189864fbde148937 548 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 188 322 5.9E-40 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AL543_09675 232a11cea031ba2e189864fbde148937 548 Gene3D G3DSA:3.40.50.1220 181 344 2.8E-50 T 11-10-2018 AL543_09675 232a11cea031ba2e189864fbde148937 548 SUPERFAMILY SSF52467 181 341 4.26E-56 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AL543_09675 232a11cea031ba2e189864fbde148937 548 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 546 3.3E-209 T 11-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AL543_09675 232a11cea031ba2e189864fbde148937 548 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 375 523 3.4E-47 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AL543_09675 232a11cea031ba2e189864fbde148937 548 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 167 1.3E-55 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AL543_09675 232a11cea031ba2e189864fbde148937 548 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 412 431 - T 11-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AL543_09675 232a11cea031ba2e189864fbde148937 548 SUPERFAMILY SSF52518 1 177 8.42E-61 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AL543_09675 232a11cea031ba2e189864fbde148937 548 Gene3D G3DSA:3.40.50.970 1 176 4.2E-67 T 11-10-2018 AL543_09675 232a11cea031ba2e189864fbde148937 548 SUPERFAMILY SSF52518 358 545 7.51E-64 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AL543_09675 232a11cea031ba2e189864fbde148937 548 Gene3D G3DSA:3.40.50.970 347 548 1.2E-64 T 11-10-2018 AL543_05940 df088155faee784030ae1c13cc760dd1 478 Gene3D G3DSA:3.40.50.720 129 462 1.2E-114 T 11-10-2018 AL543_05940 df088155faee784030ae1c13cc760dd1 478 SUPERFAMILY SSF55347 288 451 6.55E-53 T 11-10-2018 AL543_05940 df088155faee784030ae1c13cc760dd1 478 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 286 293 - T 11-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_05940 df088155faee784030ae1c13cc760dd1 478 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 293 450 7.3E-45 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_05940 df088155faee784030ae1c13cc760dd1 478 Gene3D G3DSA:3.30.360.10 287 452 1.2E-114 T 11-10-2018 AL543_05940 df088155faee784030ae1c13cc760dd1 478 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 246 259 2.3E-19 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_05940 df088155faee784030ae1c13cc760dd1 478 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 406 421 2.3E-19 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_05940 df088155faee784030ae1c13cc760dd1 478 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 365 382 2.3E-19 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_05940 df088155faee784030ae1c13cc760dd1 478 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 282 300 2.3E-19 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_05940 df088155faee784030ae1c13cc760dd1 478 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 309 325 2.3E-19 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_05940 df088155faee784030ae1c13cc760dd1 478 SMART SM00846 127 288 4.2E-53 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_05940 df088155faee784030ae1c13cc760dd1 478 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 128 238 8.0E-21 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_05940 df088155faee784030ae1c13cc760dd1 478 SUPERFAMILY SSF51735 128 304 4.88E-44 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_05940 df088155faee784030ae1c13cc760dd1 478 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 129 462 2.5E-115 T 11-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_13405 b5faa5e3ab975222a67c309e0f837044 554 Gene3D G3DSA:3.40.50.300 1 251 1.1E-48 T 11-10-2018 AL543_13405 b5faa5e3ab975222a67c309e0f837044 554 Gene3D G3DSA:3.40.50.300 273 553 2.5E-50 T 11-10-2018 AL543_13405 b5faa5e3ab975222a67c309e0f837044 554 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 551 2.0E-173 T 11-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 AL543_13405 b5faa5e3ab975222a67c309e0f837044 554 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 503 2.7E-17 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal AL543_13405 b5faa5e3ab975222a67c309e0f837044 554 PIRSF PIRSF003128 1 554 3.1E-162 T 11-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 AL543_13405 b5faa5e3ab975222a67c309e0f837044 554 SUPERFAMILY SSF52540 1 509 3.5E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_19700 c99b40990d88b1ce844d097fffd834d2 758 Pfam PF02421 Ferrous iron transport protein B 4 161 1.5E-57 T 11-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 AL543_19700 c99b40990d88b1ce844d097fffd834d2 758 Pfam PF07664 Ferrous iron transport protein B C terminus 452 504 3.2E-19 T 11-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 AL543_19700 c99b40990d88b1ce844d097fffd834d2 758 Gene3D G3DSA:3.40.50.300 2 169 1.6E-42 T 11-10-2018 AL543_19700 c99b40990d88b1ce844d097fffd834d2 758 SUPERFAMILY SSF52540 4 172 3.06E-37 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_19700 c99b40990d88b1ce844d097fffd834d2 758 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 9 688 9.4E-178 T 11-10-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 AL543_19700 c99b40990d88b1ce844d097fffd834d2 758 Pfam PF07670 Nucleoside recognition 349 440 1.7E-13 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AL543_19700 c99b40990d88b1ce844d097fffd834d2 758 Pfam PF07670 Nucleoside recognition 509 691 8.1E-36 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AL543_13290 256d679cf935a10796b79fb26f1031f9 132 Gene3D G3DSA:3.30.2130.10 1 132 2.3E-49 T 11-10-2018 AL543_13290 256d679cf935a10796b79fb26f1031f9 132 Pfam PF10000 ACT domain 2 70 3.6E-25 T 11-10-2018 IPR018717 Domain of unknown function DUF2241 AL543_13290 256d679cf935a10796b79fb26f1031f9 132 SUPERFAMILY SSF55021 2 65 1.79E-18 T 11-10-2018 AL543_13290 256d679cf935a10796b79fb26f1031f9 132 Pfam PF13840 ACT domain 72 126 4.9E-14 T 11-10-2018 IPR027795 CASTOR, ACT domain AL543_13290 256d679cf935a10796b79fb26f1031f9 132 SUPERFAMILY SSF55021 70 128 6.87E-21 T 11-10-2018 AL543_05365 04dfe21793fc2054a2ad09283d0e573f 78 ProSitePatterns PS00273 Heat-stable enterotoxins signature. 64 76 - T 11-10-2018 IPR019806 Heat-stable enterotoxin, conserved site GO:0005576|GO:0009405 AL543_05365 04dfe21793fc2054a2ad09283d0e573f 78 Pfam PF02048 Heat-stable enterotoxin ST 37 76 3.5E-7 T 11-10-2018 IPR001489 Heat-stable enterotoxin, STa GO:0005615|GO:0009405|GO:0090729 AL543_18540 faa25075c3e4602ef140e1dc89f85b35 582 Pfam PF00664 ABC transporter transmembrane region 28 293 7.2E-55 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AL543_18540 faa25075c3e4602ef140e1dc89f85b35 582 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_18540 faa25075c3e4602ef140e1dc89f85b35 582 Gene3D G3DSA:1.20.1560.10 2 328 1.2E-79 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AL543_18540 faa25075c3e4602ef140e1dc89f85b35 582 Pfam PF00005 ABC transporter 359 509 6.5E-36 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_18540 faa25075c3e4602ef140e1dc89f85b35 582 SMART SM00382 368 561 5.3E-19 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_18540 faa25075c3e4602ef140e1dc89f85b35 582 SUPERFAMILY SSF90123 14 327 1.01E-72 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AL543_18540 faa25075c3e4602ef140e1dc89f85b35 582 Gene3D G3DSA:3.40.50.300 329 581 1.1E-97 T 11-10-2018 AL543_18540 faa25075c3e4602ef140e1dc89f85b35 582 SUPERFAMILY SSF52540 331 580 3.52E-94 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_18540 faa25075c3e4602ef140e1dc89f85b35 582 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 582 1.1E-244 T 11-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 AL543_15455 2e13a83856cf6bf44f61f6374b6e076b 218 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 2 216 34.688 T 11-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 AL543_15455 2e13a83856cf6bf44f61f6374b6e076b 218 PIRSF PIRSF023956 1 218 1.3E-74 T 11-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 AL543_15455 2e13a83856cf6bf44f61f6374b6e076b 218 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 3 216 7.7E-79 T 11-10-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 AL543_15455 2e13a83856cf6bf44f61f6374b6e076b 218 Gene3D G3DSA:3.40.50.150 1 217 1.9E-60 T 11-10-2018 AL543_15455 2e13a83856cf6bf44f61f6374b6e076b 218 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 5 214 3.2E-76 T 11-10-2018 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 AL543_15455 2e13a83856cf6bf44f61f6374b6e076b 218 SUPERFAMILY SSF53335 3 214 6.11E-55 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL543_08005 7819811e542168f3475c759d6002e058 174 PRINTS PR01100 Shikimate kinase family signature 98 115 4.0E-29 T 11-10-2018 AL543_08005 7819811e542168f3475c759d6002e058 174 PRINTS PR01100 Shikimate kinase family signature 7 22 4.0E-29 T 11-10-2018 AL543_08005 7819811e542168f3475c759d6002e058 174 PRINTS PR01100 Shikimate kinase family signature 77 86 4.0E-29 T 11-10-2018 AL543_08005 7819811e542168f3475c759d6002e058 174 PRINTS PR01100 Shikimate kinase family signature 31 44 4.0E-29 T 11-10-2018 AL543_08005 7819811e542168f3475c759d6002e058 174 PRINTS PR01100 Shikimate kinase family signature 59 67 4.0E-29 T 11-10-2018 AL543_08005 7819811e542168f3475c759d6002e058 174 Hamap MF_00109 Shikimate kinase [aroK]. 4 170 29.663 T 11-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AL543_08005 7819811e542168f3475c759d6002e058 174 Pfam PF01202 Shikimate kinase 13 169 6.2E-57 T 11-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AL543_08005 7819811e542168f3475c759d6002e058 174 SUPERFAMILY SSF52540 4 169 1.33E-32 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_08005 7819811e542168f3475c759d6002e058 174 Gene3D G3DSA:3.40.50.300 1 172 2.5E-56 T 11-10-2018 AL543_08005 7819811e542168f3475c759d6002e058 174 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 11-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AL543_08025 bed13b008364cf9a06b23aa68588ecfd 196 Pfam PF05137 Fimbrial assembly protein (PilN) 104 180 1.5E-13 T 11-10-2018 IPR007813 Fimbrial assembly PilN AL543_13820 8f232e8ab57662ab1c3a1b00adb7be75 398 Pfam PF10082 Putative beta-barrel porin 2 42 394 2.4E-32 T 11-10-2018 IPR018759 Putative beta-barrel porin 2 AL543_05925 1831991012c3cc9cdabad79d4e750f67 134 Gene3D G3DSA:3.30.300.20 35 134 1.5E-24 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AL543_05925 1831991012c3cc9cdabad79d4e750f67 134 Gene3D G3DSA:2.20.25.10 1 34 9.8E-18 T 11-10-2018 AL543_05925 1831991012c3cc9cdabad79d4e750f67 134 SUPERFAMILY SSF82784 1 131 1.96E-38 T 11-10-2018 IPR036102 OsmC/Ohr superfamily AL543_05925 1831991012c3cc9cdabad79d4e750f67 134 Pfam PF02566 OsmC-like protein 29 127 6.6E-16 T 11-10-2018 IPR003718 OsmC/Ohr family AL543_13435 9544c7c74fd1cb23a56efca1000c8b8d 184 SUPERFAMILY SSF54523 19 117 6.12E-13 T 11-10-2018 AL543_13435 9544c7c74fd1cb23a56efca1000c8b8d 184 Gene3D G3DSA:3.30.700.10 19 184 2.2E-7 T 11-10-2018 AL543_13435 9544c7c74fd1cb23a56efca1000c8b8d 184 PIRSF PIRSF024622 1 184 4.2E-75 T 11-10-2018 IPR016824 Tfp pilus assembly protein FimT AL543_13435 9544c7c74fd1cb23a56efca1000c8b8d 184 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 17 37 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL543_13435 9544c7c74fd1cb23a56efca1000c8b8d 184 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 17 38 1.5E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL543_13435 9544c7c74fd1cb23a56efca1000c8b8d 184 Pfam PF07963 Prokaryotic N-terminal methylation motif 16 38 2.0E-5 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL543_13435 9544c7c74fd1cb23a56efca1000c8b8d 184 Pfam PF12019 Type II transport protein GspH 55 162 7.0E-9 T 11-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 AL543_05575 510432148d0ae7cb7275a96fbd0e696b 178 Pfam PF13302 Acetyltransferase (GNAT) domain 8 146 2.7E-22 T 11-10-2018 IPR000182 GNAT domain AL543_05575 510432148d0ae7cb7275a96fbd0e696b 178 Gene3D G3DSA:3.40.630.30 1 178 1.5E-42 T 11-10-2018 AL543_05575 510432148d0ae7cb7275a96fbd0e696b 178 SUPERFAMILY SSF55729 2 171 3.48E-41 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL543_05380 510432148d0ae7cb7275a96fbd0e696b 178 Pfam PF13302 Acetyltransferase (GNAT) domain 8 146 2.7E-22 T 11-10-2018 IPR000182 GNAT domain AL543_05380 510432148d0ae7cb7275a96fbd0e696b 178 Gene3D G3DSA:3.40.630.30 1 178 1.5E-42 T 11-10-2018 AL543_05380 510432148d0ae7cb7275a96fbd0e696b 178 SUPERFAMILY SSF55729 2 171 3.48E-41 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL543_04845 510432148d0ae7cb7275a96fbd0e696b 178 Pfam PF13302 Acetyltransferase (GNAT) domain 8 146 2.7E-22 T 11-10-2018 IPR000182 GNAT domain AL543_04845 510432148d0ae7cb7275a96fbd0e696b 178 Gene3D G3DSA:3.40.630.30 1 178 1.5E-42 T 11-10-2018 AL543_04845 510432148d0ae7cb7275a96fbd0e696b 178 SUPERFAMILY SSF55729 2 171 3.48E-41 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL543_17870 796c627334d234f71aaecd03ee1051d1 1491 Gene3D G3DSA:3.40.1140.10 1 227 9.7E-98 T 11-10-2018 AL543_17870 796c627334d234f71aaecd03ee1051d1 1491 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1337 1425 5.7E-15 T 11-10-2018 AL543_17870 796c627334d234f71aaecd03ee1051d1 1491 Pfam PF16330 MukB hinge domain 646 811 1.0E-73 T 11-10-2018 IPR032520 MukB, hinge domain AL543_17870 796c627334d234f71aaecd03ee1051d1 1491 SUPERFAMILY SSF52540 23 224 1.13E-22 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_17870 796c627334d234f71aaecd03ee1051d1 1491 Gene3D G3DSA:1.20.58.850 583 852 7.9E-136 T 11-10-2018 AL543_17870 796c627334d234f71aaecd03ee1051d1 1491 Gene3D G3DSA:1.20.1060.30 668 779 7.9E-136 T 11-10-2018 AL543_17870 796c627334d234f71aaecd03ee1051d1 1491 Gene3D G3DSA:1.20.58.850 621 831 7.9E-136 T 11-10-2018 AL543_17870 796c627334d234f71aaecd03ee1051d1 1491 Gene3D G3DSA:3.40.1140.10 1383 1469 1.1E-38 T 11-10-2018 AL543_17870 796c627334d234f71aaecd03ee1051d1 1491 PIRSF PIRSF005246 1 1487 0.0 T 11-10-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 AL543_17870 796c627334d234f71aaecd03ee1051d1 1491 Pfam PF04310 MukB N-terminal 2 227 9.8E-123 T 11-10-2018 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 AL543_17870 796c627334d234f71aaecd03ee1051d1 1491 Hamap MF_01800 Chromosome partition protein MukB [mukB]. 1 1472 10.836 T 11-10-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 AL543_06900 990ad8b1e8c35bd9b2d550d765dd9e70 182 Gene3D G3DSA:3.40.80.10 2 181 4.6E-57 T 11-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AL543_06900 990ad8b1e8c35bd9b2d550d765dd9e70 182 SUPERFAMILY SSF55846 2 179 1.83E-66 T 11-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AL543_06900 990ad8b1e8c35bd9b2d550d765dd9e70 182 SMART SM00644 16 167 3.4E-56 T 11-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AL543_06900 990ad8b1e8c35bd9b2d550d765dd9e70 182 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 27 167 7.4E-29 T 11-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AL543_13570 fda7c2cc0ac96f5eb0bc8ea4b5f04a56 294 Gene3D G3DSA:1.10.600.10 1 294 1.4E-118 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily AL543_13570 fda7c2cc0ac96f5eb0bc8ea4b5f04a56 294 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 213 225 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site AL543_13570 fda7c2cc0ac96f5eb0bc8ea4b5f04a56 294 SUPERFAMILY SSF48576 3 288 3.84E-86 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily AL543_13570 fda7c2cc0ac96f5eb0bc8ea4b5f04a56 294 Pfam PF00348 Polyprenyl synthetase 31 268 7.1E-57 T 11-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 AL543_13570 fda7c2cc0ac96f5eb0bc8ea4b5f04a56 294 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 79 95 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site AL543_19480 063948f97a11047c5bb91856d0180cf6 71 Pfam PF07208 Protein of unknown function (DUF1414) 26 69 3.3E-21 T 11-10-2018 IPR009857 Uncharacterised protein family UPF0352 AL543_19480 063948f97a11047c5bb91856d0180cf6 71 Gene3D G3DSA:1.10.3390.10 1 71 1.4E-30 T 11-10-2018 IPR023202 YejL-like superfamily AL543_19480 063948f97a11047c5bb91856d0180cf6 71 PIRSF PIRSF006188 1 71 6.0E-37 T 11-10-2018 IPR009857 Uncharacterised protein family UPF0352 AL543_19480 063948f97a11047c5bb91856d0180cf6 71 SUPERFAMILY SSF158651 1 70 1.26E-28 T 11-10-2018 IPR023202 YejL-like superfamily AL543_19480 063948f97a11047c5bb91856d0180cf6 71 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 71 23.21 T 11-10-2018 IPR009857 Uncharacterised protein family UPF0352 AL543_19480 063948f97a11047c5bb91856d0180cf6 71 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 1.0E-32 T 11-10-2018 IPR009857 Uncharacterised protein family UPF0352 AL543_05405 d5ac6204ce53097acbc85ccf73a1e001 105 Pfam PF01845 CcdB protein 3 104 1.6E-34 T 11-10-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 AL543_05405 d5ac6204ce53097acbc85ccf73a1e001 105 SUPERFAMILY SSF50118 3 105 1.93E-31 T 11-10-2018 AL543_05405 d5ac6204ce53097acbc85ccf73a1e001 105 ProDom PD012578 PLASMID TOXIN CCDB CYTOTOXIC LETB POST-SEGREGATION SYSTEM CCDB-LIKE GYRASE FUSED-CCDB 18 104 4.0E-38 T 11-10-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 AL543_05405 d5ac6204ce53097acbc85ccf73a1e001 105 Gene3D G3DSA:2.30.30.110 1 105 1.1E-39 T 11-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor AL543_11700 b5a21a69713ab103d3552eabf3432bb8 587 SUPERFAMILY SSF117023 453 583 2.35E-43 T 11-10-2018 AL543_11700 b5a21a69713ab103d3552eabf3432bb8 587 SMART SM00400 36 90 2.7E-35 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AL543_11700 b5a21a69713ab103d3552eabf3432bb8 587 TIGRFAM TIGR01391 dnaG: DNA primase 5 425 4.3E-145 T 11-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 AL543_11700 b5a21a69713ab103d3552eabf3432bb8 587 SUPERFAMILY SSF56731 122 432 3.75E-110 T 11-10-2018 AL543_11700 b5a21a69713ab103d3552eabf3432bb8 587 Hamap MF_00974 DNA primase [dnaG]. 4 582 29.057 T 11-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 AL543_11700 b5a21a69713ab103d3552eabf3432bb8 587 PIRSF PIRSF002811 2 586 1.6E-142 T 11-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 AL543_11700 b5a21a69713ab103d3552eabf3432bb8 587 Gene3D G3DSA:3.90.980.10 122 247 5.3E-46 T 11-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily AL543_11700 b5a21a69713ab103d3552eabf3432bb8 587 Pfam PF08278 DNA primase DnaG DnaB-binding 457 580 5.2E-34 T 11-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 AL543_11700 b5a21a69713ab103d3552eabf3432bb8 587 SMART SM00766 456 581 3.3E-51 T 11-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 AL543_11700 b5a21a69713ab103d3552eabf3432bb8 587 Pfam PF08275 DNA primase catalytic core, N-terminal domain 133 257 9.1E-43 T 11-10-2018 IPR013264 DNA primase, catalytic core, N-terminal AL543_11700 b5a21a69713ab103d3552eabf3432bb8 587 SMART SM00493 266 337 1.7E-19 T 11-10-2018 IPR006171 TOPRIM domain AL543_11700 b5a21a69713ab103d3552eabf3432bb8 587 Pfam PF13155 Toprim-like 270 356 1.5E-13 T 11-10-2018 AL543_11700 b5a21a69713ab103d3552eabf3432bb8 587 Pfam PF10410 DnaB-helicase binding domain of primase 376 431 1.6E-8 T 11-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 AL543_11700 b5a21a69713ab103d3552eabf3432bb8 587 Gene3D G3DSA:3.40.1360.10 248 374 1.7E-40 T 11-10-2018 AL543_11700 b5a21a69713ab103d3552eabf3432bb8 587 Gene3D G3DSA:1.10.860.10 444 587 2.1E-62 T 11-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AL543_11700 b5a21a69713ab103d3552eabf3432bb8 587 Pfam PF01807 CHC2 zinc finger 6 100 4.2E-41 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AL543_11700 b5a21a69713ab103d3552eabf3432bb8 587 Gene3D G3DSA:3.90.580.10 1 102 8.8E-41 T 11-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 AL543_11700 b5a21a69713ab103d3552eabf3432bb8 587 SUPERFAMILY SSF57783 4 97 3.06E-37 T 11-10-2018 AL543_11700 b5a21a69713ab103d3552eabf3432bb8 587 Gene3D G3DSA:1.20.50.20 375 433 6.4E-10 T 11-10-2018 AL543_19280 884bb2f0ccbbdbb7440a835d5353f3b6 325 SUPERFAMILY SSF159501 43 294 3.98E-74 T 11-10-2018 AL543_19280 884bb2f0ccbbdbb7440a835d5353f3b6 325 PIRSF PIRSF020419 4 309 2.9E-111 T 11-10-2018 IPR016773 Ferric uptake regulator, CjrA, predicted AL543_19280 884bb2f0ccbbdbb7440a835d5353f3b6 325 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 65 265 5.0E-58 T 11-10-2018 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN AL543_19280 884bb2f0ccbbdbb7440a835d5353f3b6 325 Gene3D G3DSA:3.40.50.11550 54 278 4.5E-26 T 11-10-2018 AL543_19280 884bb2f0ccbbdbb7440a835d5353f3b6 325 Gene3D G3DSA:1.10.8.760 165 229 4.5E-26 T 11-10-2018 AL543_18440 b3f3837f7e17fbbb224797afa63cbd3f 260 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 11 253 2.7E-83 T 11-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 AL543_18440 b3f3837f7e17fbbb224797afa63cbd3f 260 Gene3D G3DSA:3.40.190.10 32 253 1.2E-72 T 11-10-2018 AL543_18440 b3f3837f7e17fbbb224797afa63cbd3f 260 SUPERFAMILY SSF53850 3 257 3.77E-69 T 11-10-2018 AL543_18440 b3f3837f7e17fbbb224797afa63cbd3f 260 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 29 254 2.1E-61 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL543_18440 b3f3837f7e17fbbb224797afa63cbd3f 260 SMART SM00062 28 256 7.5E-68 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL543_18440 b3f3837f7e17fbbb224797afa63cbd3f 260 SMART SM00079 28 255 2.7E-5 T 11-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AL543_18440 b3f3837f7e17fbbb224797afa63cbd3f 260 Gene3D G3DSA:3.40.190.10 114 212 1.2E-72 T 11-10-2018 AL543_06810 4cf6df013f144b016f25f43cce21660f 440 Gene3D G3DSA:3.40.50.720 6 96 8.7E-20 T 11-10-2018 AL543_06810 4cf6df013f144b016f25f43cce21660f 440 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 8 439 33.418 T 11-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL543_06810 4cf6df013f144b016f25f43cce21660f 440 Gene3D G3DSA:3.90.190.20 303 436 6.6E-39 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL543_06810 4cf6df013f144b016f25f43cce21660f 440 Gene3D G3DSA:3.40.1190.10 97 302 1.3E-65 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL543_06810 4cf6df013f144b016f25f43cce21660f 440 SUPERFAMILY SSF51984 8 96 5.36E-16 T 11-10-2018 AL543_06810 4cf6df013f144b016f25f43cce21660f 440 SUPERFAMILY SSF53623 98 300 1.44E-54 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL543_06810 4cf6df013f144b016f25f43cce21660f 440 SUPERFAMILY SSF53244 302 439 1.6E-43 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL543_06810 4cf6df013f144b016f25f43cce21660f 440 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 9 437 7.5E-142 T 11-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL543_06810 4cf6df013f144b016f25f43cce21660f 440 Pfam PF08245 Mur ligase middle domain 113 282 3.4E-32 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AL543_06810 4cf6df013f144b016f25f43cce21660f 440 Pfam PF02875 Mur ligase family, glutamate ligase domain 305 364 5.5E-6 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 AL543_15295 8ad40d2bf055736ec29197406e63ebba 1021 Gene3D G3DSA:3.30.465.40 26 221 1.4E-47 T 11-10-2018 AL543_15295 8ad40d2bf055736ec29197406e63ebba 1021 Pfam PF02913 FAD linked oxidases, C-terminal domain 286 544 1.8E-64 T 11-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 AL543_15295 8ad40d2bf055736ec29197406e63ebba 1021 SUPERFAMILY SSF46548 581 695 6.28E-7 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL543_15295 8ad40d2bf055736ec29197406e63ebba 1021 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 677 688 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL543_15295 8ad40d2bf055736ec29197406e63ebba 1021 Pfam PF13183 4Fe-4S dicluster domain 580 691 2.6E-12 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL543_15295 8ad40d2bf055736ec29197406e63ebba 1021 SUPERFAMILY SSF56176 29 287 2.25E-52 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AL543_15295 8ad40d2bf055736ec29197406e63ebba 1021 Pfam PF01565 FAD binding domain 62 201 1.2E-36 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AL543_15295 8ad40d2bf055736ec29197406e63ebba 1021 SUPERFAMILY SSF55103 262 548 5.23E-52 T 11-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AL543_05660 4c3f3855ce29a906d3c6feef6df51987 207 SMART SM00530 31 86 3.1E-13 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL543_05660 4c3f3855ce29a906d3c6feef6df51987 207 SUPERFAMILY SSF51182 97 204 6.21E-25 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AL543_05660 4c3f3855ce29a906d3c6feef6df51987 207 Pfam PF07883 Cupin domain 145 204 1.6E-9 T 11-10-2018 IPR013096 Cupin 2, conserved barrel AL543_05660 4c3f3855ce29a906d3c6feef6df51987 207 Gene3D G3DSA:2.60.120.10 93 205 5.0E-24 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL543_05660 4c3f3855ce29a906d3c6feef6df51987 207 SUPERFAMILY SSF47413 27 90 2.2E-15 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL543_05660 4c3f3855ce29a906d3c6feef6df51987 207 Gene3D G3DSA:1.10.260.40 26 92 5.7E-16 T 11-10-2018 AL543_05660 4c3f3855ce29a906d3c6feef6df51987 207 Pfam PF01381 Helix-turn-helix 32 84 7.5E-13 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL543_07960 e6fa17fe4be7950b6adfcd1dadb81335 470 Pfam PF00919 Uncharacterized protein family UPF0004 34 121 4.9E-22 T 11-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 AL543_07960 e6fa17fe4be7950b6adfcd1dadb81335 470 Gene3D G3DSA:3.40.50.12160 33 161 2.8E-31 T 11-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily AL543_07960 e6fa17fe4be7950b6adfcd1dadb81335 470 Gene3D G3DSA:2.40.50.140 405 470 3.7E-24 T 11-10-2018 AL543_07960 e6fa17fe4be7950b6adfcd1dadb81335 470 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 34 463 1.3E-188 T 11-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 AL543_07960 e6fa17fe4be7950b6adfcd1dadb81335 470 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 169 189 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 AL543_07960 e6fa17fe4be7950b6adfcd1dadb81335 470 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 33 465 63.081 T 11-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 AL543_07960 e6fa17fe4be7950b6adfcd1dadb81335 470 Pfam PF04055 Radical SAM superfamily 171 348 6.2E-30 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL543_07960 e6fa17fe4be7950b6adfcd1dadb81335 470 Gene3D G3DSA:3.80.30.20 163 404 3.6E-73 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AL543_07960 e6fa17fe4be7950b6adfcd1dadb81335 470 SUPERFAMILY SSF102114 131 395 6.8E-53 T 11-10-2018 AL543_07960 e6fa17fe4be7950b6adfcd1dadb81335 470 SMART SM00729 165 390 4.1E-57 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AL543_07960 e6fa17fe4be7950b6adfcd1dadb81335 470 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 34 463 8.3E-111 T 11-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 AL543_17775 a7a44d34506002b8a9f9652580dcb045 280 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 82 91 - T 11-10-2018 IPR024002 Formate/nitrite transporter, conserved site AL543_17775 a7a44d34506002b8a9f9652580dcb045 280 Gene3D G3DSA:1.20.1080.10 27 280 2.5E-101 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AL543_17775 a7a44d34506002b8a9f9652580dcb045 280 Pfam PF01226 Formate/nitrite transporter 14 275 1.1E-76 T 11-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 AL543_17775 a7a44d34506002b8a9f9652580dcb045 280 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 167 177 - T 11-10-2018 IPR024002 Formate/nitrite transporter, conserved site AL543_17775 a7a44d34506002b8a9f9652580dcb045 280 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 25 279 1.3E-80 T 11-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 AL543_17775 a7a44d34506002b8a9f9652580dcb045 280 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 13 278 7.6E-112 T 11-10-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 AL543_04115 f2307783f83188da6dcd53a2b1485b81 367 TIGRFAM TIGR02326 transamin_PhnW: 2-aminoethylphosphonate--pyruvate transaminase 2 364 3.2E-191 T 11-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 AL543_04115 f2307783f83188da6dcd53a2b1485b81 367 TIGRFAM TIGR03301 PhnW-AepZ: 2-aminoethylphosphonate aminotransferase 6 362 2.0E-163 T 11-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 AL543_04115 f2307783f83188da6dcd53a2b1485b81 367 SUPERFAMILY SSF53383 3 362 4.57E-88 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL543_04115 f2307783f83188da6dcd53a2b1485b81 367 Gene3D G3DSA:3.40.640.10 16 262 1.6E-119 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL543_04115 f2307783f83188da6dcd53a2b1485b81 367 PIRSF PIRSF000524 1 365 1.0E-57 T 11-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 AL543_04115 f2307783f83188da6dcd53a2b1485b81 367 Hamap MF_01376 2-aminoethylphosphonate--pyruvate transaminase [phnW]. 1 367 208.662 T 11-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 AL543_04115 f2307783f83188da6dcd53a2b1485b81 367 Gene3D G3DSA:3.90.1150.10 8 352 1.6E-119 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL543_04115 f2307783f83188da6dcd53a2b1485b81 367 Pfam PF00266 Aminotransferase class-V 37 303 2.5E-29 T 11-10-2018 IPR000192 Aminotransferase class V domain AL543_01510 45af6029b2ee1baecb93bf6072ed9bd5 174 Pfam PF11188 Protein of unknown function (DUF2975) 59 174 4.7E-16 T 11-10-2018 IPR021354 Protein of unknown function DUF2975 AL543_11270 cbbb4244aa98999d8aa4a2ae6b84919c 407 TIGRFAM TIGR01078 arcA: arginine deiminase 4 407 5.7E-174 T 11-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AL543_11270 cbbb4244aa98999d8aa4a2ae6b84919c 407 Gene3D G3DSA:1.10.3930.10 68 148 8.5E-144 T 11-10-2018 AL543_11270 cbbb4244aa98999d8aa4a2ae6b84919c 407 Pfam PF02274 Amidinotransferase 18 404 5.3E-108 T 11-10-2018 AL543_11270 cbbb4244aa98999d8aa4a2ae6b84919c 407 PRINTS PR01466 Bacterial arginine deiminase signature 363 377 3.3E-44 T 11-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AL543_11270 cbbb4244aa98999d8aa4a2ae6b84919c 407 PRINTS PR01466 Bacterial arginine deiminase signature 343 360 3.3E-44 T 11-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AL543_11270 cbbb4244aa98999d8aa4a2ae6b84919c 407 PRINTS PR01466 Bacterial arginine deiminase signature 2 22 3.3E-44 T 11-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AL543_11270 cbbb4244aa98999d8aa4a2ae6b84919c 407 PRINTS PR01466 Bacterial arginine deiminase signature 177 192 3.3E-44 T 11-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AL543_11270 cbbb4244aa98999d8aa4a2ae6b84919c 407 PRINTS PR01466 Bacterial arginine deiminase signature 386 404 3.3E-44 T 11-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AL543_11270 cbbb4244aa98999d8aa4a2ae6b84919c 407 PRINTS PR01466 Bacterial arginine deiminase signature 149 167 3.3E-44 T 11-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AL543_11270 cbbb4244aa98999d8aa4a2ae6b84919c 407 Gene3D G3DSA:3.75.10.10 6 404 8.5E-144 T 11-10-2018 AL543_11270 cbbb4244aa98999d8aa4a2ae6b84919c 407 Hamap MF_00242 Arginine deiminase [arcA]. 1 407 43.78 T 11-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AL543_11270 cbbb4244aa98999d8aa4a2ae6b84919c 407 PIRSF PIRSF006356 1 407 1.0E-151 T 11-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AL543_11270 cbbb4244aa98999d8aa4a2ae6b84919c 407 SUPERFAMILY SSF55909 4 407 5.0E-125 T 11-10-2018 AL543_16550 d5b056d5dc5bbdf77a0d7a5b6e914dc7 345 Gene3D G3DSA:3.40.190.10 129 318 3.0E-123 T 11-10-2018 AL543_16550 d5b056d5dc5bbdf77a0d7a5b6e914dc7 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 146 160 2.8E-87 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL543_16550 d5b056d5dc5bbdf77a0d7a5b6e914dc7 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 120 136 2.8E-87 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL543_16550 d5b056d5dc5bbdf77a0d7a5b6e914dc7 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 245 264 2.8E-87 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL543_16550 d5b056d5dc5bbdf77a0d7a5b6e914dc7 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 46 67 2.8E-87 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL543_16550 d5b056d5dc5bbdf77a0d7a5b6e914dc7 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 89 102 2.8E-87 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL543_16550 d5b056d5dc5bbdf77a0d7a5b6e914dc7 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 164 183 2.8E-87 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL543_16550 d5b056d5dc5bbdf77a0d7a5b6e914dc7 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 73 87 2.8E-87 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL543_16550 d5b056d5dc5bbdf77a0d7a5b6e914dc7 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 30 46 2.8E-87 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL543_16550 d5b056d5dc5bbdf77a0d7a5b6e914dc7 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 201 220 2.8E-87 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL543_16550 d5b056d5dc5bbdf77a0d7a5b6e914dc7 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 290 316 2.8E-87 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL543_16550 d5b056d5dc5bbdf77a0d7a5b6e914dc7 345 PIRSF PIRSF019574 1 345 1.4E-125 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL543_16550 d5b056d5dc5bbdf77a0d7a5b6e914dc7 345 SUPERFAMILY SSF53850 24 342 3.64E-95 T 11-10-2018 AL543_16550 d5b056d5dc5bbdf77a0d7a5b6e914dc7 345 Gene3D G3DSA:3.40.190.10 29 312 3.0E-123 T 11-10-2018 AL543_16550 d5b056d5dc5bbdf77a0d7a5b6e914dc7 345 Pfam PF13416 Bacterial extracellular solute-binding protein 40 311 1.0E-42 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein AL543_07510 091948e18b0844d2373a9abbfa6dc92f 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 4 241 1.2E-126 T 11-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 AL543_07510 091948e18b0844d2373a9abbfa6dc92f 241 SUPERFAMILY SSF52540 3 237 2.89E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_07510 091948e18b0844d2373a9abbfa6dc92f 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 214 236 3.6E-9 T 11-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AL543_07510 091948e18b0844d2373a9abbfa6dc92f 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_07510 091948e18b0844d2373a9abbfa6dc92f 241 SMART SM00382 28 202 3.0E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_07510 091948e18b0844d2373a9abbfa6dc92f 241 Gene3D G3DSA:3.40.50.300 2 241 6.8E-71 T 11-10-2018 AL543_07510 091948e18b0844d2373a9abbfa6dc92f 241 Pfam PF00005 ABC transporter 20 166 7.3E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_03540 d341ee6daf77868dfefbf2b39e6eb7c3 789 SUPERFAMILY SSF47384 559 630 3.53E-10 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL543_03540 d341ee6daf77868dfefbf2b39e6eb7c3 789 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 675 780 6.0E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_03540 d341ee6daf77868dfefbf2b39e6eb7c3 789 SMART SM00388 563 631 4.8E-9 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_03540 d341ee6daf77868dfefbf2b39e6eb7c3 789 PIRSF PIRSF037119 1 785 0.0 T 11-10-2018 IPR017116 Signal transduction histidine kinase, PgtB AL543_03540 d341ee6daf77868dfefbf2b39e6eb7c3 789 SUPERFAMILY SSF55874 622 779 1.23E-32 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_03540 d341ee6daf77868dfefbf2b39e6eb7c3 789 Gene3D G3DSA:3.30.450.20 389 528 2.5E-6 T 11-10-2018 AL543_03540 d341ee6daf77868dfefbf2b39e6eb7c3 789 Pfam PF00512 His Kinase A (phospho-acceptor) domain 565 629 3.9E-10 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_03540 d341ee6daf77868dfefbf2b39e6eb7c3 789 Gene3D G3DSA:3.30.565.10 632 787 9.4E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_03540 d341ee6daf77868dfefbf2b39e6eb7c3 789 SMART SM00387 674 783 3.6E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_03540 d341ee6daf77868dfefbf2b39e6eb7c3 789 PRINTS PR00344 Bacterial sensor protein C-terminal signature 732 742 1.1E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_03540 d341ee6daf77868dfefbf2b39e6eb7c3 789 PRINTS PR00344 Bacterial sensor protein C-terminal signature 714 728 1.1E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_03540 d341ee6daf77868dfefbf2b39e6eb7c3 789 PRINTS PR00344 Bacterial sensor protein C-terminal signature 743 761 1.1E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_03540 d341ee6daf77868dfefbf2b39e6eb7c3 789 SMART SM00304 344 396 3.1E-4 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_03540 d341ee6daf77868dfefbf2b39e6eb7c3 789 Gene3D G3DSA:1.10.287.130 539 626 1.8E-19 T 11-10-2018 AL543_03890 bedf20dd103f19f57dac0be937fdb06b 286 Pfam PF03466 LysR substrate binding domain 89 285 1.7E-27 T 11-10-2018 IPR005119 LysR, substrate-binding AL543_03890 bedf20dd103f19f57dac0be937fdb06b 286 SUPERFAMILY SSF46785 4 89 1.36E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_03890 bedf20dd103f19f57dac0be937fdb06b 286 Gene3D G3DSA:1.10.10.10 3 91 2.5E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_03890 bedf20dd103f19f57dac0be937fdb06b 286 Gene3D G3DSA:3.40.190.290 92 284 3.1E-38 T 11-10-2018 AL543_03890 bedf20dd103f19f57dac0be937fdb06b 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.8E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_03890 bedf20dd103f19f57dac0be937fdb06b 286 SUPERFAMILY SSF53850 92 286 2.35E-29 T 11-10-2018 AL543_18040 d3d791c7c0aecd83a2e4ccd141606c6f 410 Gene3D G3DSA:3.30.70.360 211 320 8.7E-135 T 11-10-2018 AL543_18040 d3d791c7c0aecd83a2e4ccd141606c6f 410 Gene3D G3DSA:3.40.630.10 3 401 8.7E-135 T 11-10-2018 AL543_18040 d3d791c7c0aecd83a2e4ccd141606c6f 410 Pfam PF01546 Peptidase family M20/M25/M40 140 404 1.6E-13 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 AL543_18040 d3d791c7c0aecd83a2e4ccd141606c6f 410 PIRSF PIRSF037215 1 410 4.3E-144 T 11-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 AL543_18040 d3d791c7c0aecd83a2e4ccd141606c6f 410 TIGRFAM TIGR01882 peptidase-T: peptidase T 2 409 2.6E-108 T 11-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 AL543_18040 d3d791c7c0aecd83a2e4ccd141606c6f 410 SUPERFAMILY SSF55031 211 316 3.35E-30 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AL543_18040 d3d791c7c0aecd83a2e4ccd141606c6f 410 SUPERFAMILY SSF53187 2 405 1.47E-64 T 11-10-2018 AL543_18040 d3d791c7c0aecd83a2e4ccd141606c6f 410 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 75 84 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AL543_18040 d3d791c7c0aecd83a2e4ccd141606c6f 410 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 139 178 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AL543_14715 bc0b3892ac63de937c38317576c03af6 121 Gene3D G3DSA:1.20.120.160 2 118 4.1E-17 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AL543_14715 bc0b3892ac63de937c38317576c03af6 121 SUPERFAMILY SSF47226 11 108 2.49E-17 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AL543_14715 bc0b3892ac63de937c38317576c03af6 121 SMART SM00073 14 110 0.0071 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AL543_14715 bc0b3892ac63de937c38317576c03af6 121 Pfam PF01627 Hpt domain 24 80 2.1E-9 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AL543_05270 f3b9ac8533da1af5a39487236b5941ba 183 Pfam PF12464 Maltose acetyltransferase 6 57 2.5E-15 T 11-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AL543_05270 f3b9ac8533da1af5a39487236b5941ba 183 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 129 164 3.0E-12 T 11-10-2018 IPR001451 Hexapeptide repeat AL543_05270 f3b9ac8533da1af5a39487236b5941ba 183 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 94 102 0.14 T 11-10-2018 IPR001451 Hexapeptide repeat AL543_05270 f3b9ac8533da1af5a39487236b5941ba 183 Gene3D G3DSA:2.160.10.10 1 183 2.9E-67 T 11-10-2018 AL543_05270 f3b9ac8533da1af5a39487236b5941ba 183 SMART SM01266 4 58 5.3E-21 T 11-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AL543_05270 f3b9ac8533da1af5a39487236b5941ba 183 SUPERFAMILY SSF51161 2 182 9.98E-51 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AL543_00210 7411542662ba4c53b0591196440f45f6 172 Pfam PF09374 Predicted Peptidoglycan domain 97 159 2.7E-11 T 11-10-2018 IPR018537 Peptidoglycan binding domain AL543_00210 7411542662ba4c53b0591196440f45f6 172 SUPERFAMILY SSF53955 2 163 4.5E-44 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AL543_00210 7411542662ba4c53b0591196440f45f6 172 Pfam PF05838 Glycosyl hydrolase 108 7 94 3.2E-20 T 11-10-2018 IPR008565 Protein of unknown function DUF847 AL543_00210 7411542662ba4c53b0591196440f45f6 172 Gene3D G3DSA:1.20.141.10 1 172 6.0E-47 T 11-10-2018 AL543_03120 97bd3b16ec4ec3a22368e065d237b79d 397 Gene3D G3DSA:3.40.50.720 1 396 3.6E-167 T 11-10-2018 AL543_03120 97bd3b16ec4ec3a22368e065d237b79d 397 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 3 81 8.1E-34 T 11-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL543_03120 97bd3b16ec4ec3a22368e065d237b79d 397 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 394 51.115 T 11-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL543_03120 97bd3b16ec4ec3a22368e065d237b79d 397 Pfam PF07055 Enoyl reductase FAD binding domain 325 388 4.3E-26 T 11-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL543_03120 97bd3b16ec4ec3a22368e065d237b79d 397 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 84 318 2.4E-97 T 11-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL543_03120 97bd3b16ec4ec3a22368e065d237b79d 397 SUPERFAMILY SSF51735 42 147 3.96E-6 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_12250 71d78e53eb3b0211edd82caff74b8e4b 365 SUPERFAMILY SSF111369 71 284 1.57E-26 T 11-10-2018 AL543_12250 71d78e53eb3b0211edd82caff74b8e4b 365 Gene3D G3DSA:2.40.420.20 290 357 1.4E-46 T 11-10-2018 AL543_12250 71d78e53eb3b0211edd82caff74b8e4b 365 Gene3D G3DSA:2.40.30.170 71 289 1.4E-46 T 11-10-2018 AL543_12250 71d78e53eb3b0211edd82caff74b8e4b 365 Gene3D G3DSA:2.40.50.100 81 209 1.4E-46 T 11-10-2018 AL543_12250 71d78e53eb3b0211edd82caff74b8e4b 365 Gene3D G3DSA:1.10.287.470 116 175 1.4E-46 T 11-10-2018 AL543_12250 71d78e53eb3b0211edd82caff74b8e4b 365 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 72 277 1.3E-22 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL543_12250 71d78e53eb3b0211edd82caff74b8e4b 365 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 63 358 2.9E-42 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL543_19310 f9e05848dda0bf70d3636f65abffb5c8 405 SUPERFAMILY SSF53067 86 393 1.3E-55 T 11-10-2018 AL543_19310 f9e05848dda0bf70d3636f65abffb5c8 405 Gene3D G3DSA:3.30.420.40 208 377 2.5E-113 T 11-10-2018 AL543_19310 f9e05848dda0bf70d3636f65abffb5c8 405 Gene3D G3DSA:3.30.420.40 91 387 2.5E-113 T 11-10-2018 AL543_19310 f9e05848dda0bf70d3636f65abffb5c8 405 Pfam PF00480 ROK family 88 390 6.3E-69 T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AL543_19310 f9e05848dda0bf70d3636f65abffb5c8 405 Gene3D G3DSA:1.10.10.10 2 80 1.1E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_19310 f9e05848dda0bf70d3636f65abffb5c8 405 SUPERFAMILY SSF46785 10 77 1.22E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_19310 f9e05848dda0bf70d3636f65abffb5c8 405 ProSitePatterns PS01125 ROK family signature. 218 245 - T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AL543_00430 ba437a4d89446188e4b0ec8189eb6b35 453 TIGRFAM TIGR04107 rSAM_HutW: putative heme utilization radical SAM enzyme HutW 22 441 1.0E-180 T 11-10-2018 IPR026332 Putative heme utilization radical SAM enzyme HutW AL543_00430 ba437a4d89446188e4b0ec8189eb6b35 453 SMART SM00729 61 284 6.0E-36 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AL543_00430 ba437a4d89446188e4b0ec8189eb6b35 453 Pfam PF04055 Radical SAM superfamily 66 236 1.6E-12 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL543_00430 ba437a4d89446188e4b0ec8189eb6b35 453 Gene3D G3DSA:3.80.30.20 28 362 1.2E-73 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AL543_00430 ba437a4d89446188e4b0ec8189eb6b35 453 SUPERFAMILY SSF102114 62 438 6.02E-81 T 11-10-2018 AL543_09615 127a7750a715c12133ccf18896ffe5ad 688 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 5 549 2.1E-204 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL543_09615 127a7750a715c12133ccf18896ffe5ad 688 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 3 687 5.8E-294 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL543_09615 127a7750a715c12133ccf18896ffe5ad 688 SUPERFAMILY SSF109604 348 488 2.93E-12 T 11-10-2018 AL543_09615 127a7750a715c12133ccf18896ffe5ad 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 49 61 5.8E-36 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL543_09615 127a7750a715c12133ccf18896ffe5ad 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 317 333 5.8E-36 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL543_09615 127a7750a715c12133ccf18896ffe5ad 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 245 260 5.8E-36 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL543_09615 127a7750a715c12133ccf18896ffe5ad 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 393 412 5.8E-36 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL543_09615 127a7750a715c12133ccf18896ffe5ad 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 6 19 5.8E-36 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL543_09615 127a7750a715c12133ccf18896ffe5ad 688 Pfam PF05746 DALR anticodon binding domain 580 677 7.9E-10 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AL543_09615 127a7750a715c12133ccf18896ffe5ad 688 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 2 686 25.829 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL543_08415 e4158219041e1f7bc4f40b35eeb8e6e5 262 ProSitePatterns PS00622 LuxR-type HTH domain signature. 215 242 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_08415 e4158219041e1f7bc4f40b35eeb8e6e5 262 Gene3D G3DSA:1.10.10.10 176 260 6.7E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_08415 e4158219041e1f7bc4f40b35eeb8e6e5 262 SUPERFAMILY SSF46894 194 248 1.63E-14 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL543_08415 e4158219041e1f7bc4f40b35eeb8e6e5 262 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 201 215 1.2E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_08415 e4158219041e1f7bc4f40b35eeb8e6e5 262 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 215 231 1.2E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_08415 e4158219041e1f7bc4f40b35eeb8e6e5 262 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 231 243 1.2E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_08415 e4158219041e1f7bc4f40b35eeb8e6e5 262 SMART SM00421 198 256 7.5E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_08415 e4158219041e1f7bc4f40b35eeb8e6e5 262 Pfam PF00196 Bacterial regulatory proteins, luxR family 200 248 6.3E-13 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_17620 34e6b7a0b2a6cd2f5041e32ca3baab88 382 Gene3D G3DSA:3.40.190.10 151 376 3.2E-21 T 11-10-2018 AL543_17620 34e6b7a0b2a6cd2f5041e32ca3baab88 382 Pfam PF13416 Bacterial extracellular solute-binding protein 57 346 1.1E-25 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein AL543_17620 34e6b7a0b2a6cd2f5041e32ca3baab88 382 SUPERFAMILY SSF53850 31 377 1.39E-42 T 11-10-2018 AL543_17620 34e6b7a0b2a6cd2f5041e32ca3baab88 382 Gene3D G3DSA:3.40.190.10 67 352 3.2E-21 T 11-10-2018 AL543_17620 34e6b7a0b2a6cd2f5041e32ca3baab88 382 PIRSF PIRSF029172 1 380 3.9E-177 T 11-10-2018 IPR027020 Protein ynjB AL543_13815 e9a0b5dac2a86c2fd40792c993a80cb6 464 Pfam PF02397 Bacterial sugar transferase 274 456 1.5E-65 T 11-10-2018 IPR003362 Bacterial sugar transferase AL543_13815 e9a0b5dac2a86c2fd40792c993a80cb6 464 Pfam PF13727 CoA-binding domain 62 238 1.4E-46 T 11-10-2018 AL543_13815 e9a0b5dac2a86c2fd40792c993a80cb6 464 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 22 464 2.0E-173 T 11-10-2018 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 AL543_13815 e9a0b5dac2a86c2fd40792c993a80cb6 464 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 20 464 1.7E-151 T 11-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase AL543_13815 e9a0b5dac2a86c2fd40792c993a80cb6 464 Gene3D G3DSA:3.40.50.720 141 263 2.0E-15 T 11-10-2018 AL543_13815 e9a0b5dac2a86c2fd40792c993a80cb6 464 SUPERFAMILY SSF51735 142 267 2.87E-9 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_11155 62acbe47740f36c14f10a37b2654ba28 554 TIGRFAM TIGR02519 pilus_MshL: pilus (MSHA type) biogenesis protein MshL 237 530 1.8E-106 T 11-10-2018 IPR013358 Pilus biogenesis, MshL AL543_11155 62acbe47740f36c14f10a37b2654ba28 554 Pfam PF00263 Bacterial type II and III secretion system protein 355 530 5.1E-41 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 AL543_11155 62acbe47740f36c14f10a37b2654ba28 554 SMART SM00965 93 141 6.6E-6 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL543_11155 62acbe47740f36c14f10a37b2654ba28 554 PRINTS PR00811 Bacterial general secretion pathway protein D signature 495 513 1.2E-17 T 11-10-2018 IPR001775 GspD/PilQ family AL543_11155 62acbe47740f36c14f10a37b2654ba28 554 PRINTS PR00811 Bacterial general secretion pathway protein D signature 350 374 1.2E-17 T 11-10-2018 IPR001775 GspD/PilQ family AL543_11155 62acbe47740f36c14f10a37b2654ba28 554 PRINTS PR00811 Bacterial general secretion pathway protein D signature 272 282 1.2E-17 T 11-10-2018 IPR001775 GspD/PilQ family AL543_11155 62acbe47740f36c14f10a37b2654ba28 554 PRINTS PR00811 Bacterial general secretion pathway protein D signature 518 532 1.2E-17 T 11-10-2018 IPR001775 GspD/PilQ family AL543_11155 62acbe47740f36c14f10a37b2654ba28 554 Pfam PF07655 Secretin N-terminal domain 145 243 4.7E-25 T 11-10-2018 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 AL543_11155 62acbe47740f36c14f10a37b2654ba28 554 Gene3D G3DSA:3.55.50.30 53 145 1.5E-10 T 11-10-2018 AL543_01915 a7157abb4d64c13d33b28058ab1e86c0 663 Pfam PF05013 N-formylglutamate amidohydrolase 42 225 4.9E-13 T 11-10-2018 IPR007709 N-formylglutamate amidohydrolase AL543_01915 a7157abb4d64c13d33b28058ab1e86c0 663 SMART SM01154 323 662 6.3E-155 T 11-10-2018 IPR012548 Protein of unknown function DUF1704 AL543_01915 a7157abb4d64c13d33b28058ab1e86c0 663 TIGRFAM TIGR02421 QEGLA: conserved hypothetical protein 297 656 4.7E-146 T 11-10-2018 IPR012656 Conserved hypothetical protein CHP02421, QEGLA AL543_01915 a7157abb4d64c13d33b28058ab1e86c0 663 SUPERFAMILY SSF53187 35 222 5.65E-8 T 11-10-2018 AL543_01915 a7157abb4d64c13d33b28058ab1e86c0 663 Pfam PF08014 Domain of unknown function (DUF1704) 324 657 1.9E-109 T 11-10-2018 IPR012548 Protein of unknown function DUF1704 AL543_15735 d55a4d113f9111a1d5c8d472971edaf3 451 SMART SM01049 42 133 7.3E-34 T 11-10-2018 IPR033480 Single Cache domain 2 AL543_15735 d55a4d113f9111a1d5c8d472971edaf3 451 SMART SM00387 353 447 2.7E-7 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_15735 d55a4d113f9111a1d5c8d472971edaf3 451 Pfam PF07730 Histidine kinase 250 315 9.4E-13 T 11-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AL543_15735 d55a4d113f9111a1d5c8d472971edaf3 451 PIRSF PIRSF037314 1 450 2.7E-187 T 11-10-2018 IPR017171 Signal transduction histidine kinase, MctS AL543_15735 d55a4d113f9111a1d5c8d472971edaf3 451 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 446 6.9E-9 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_15735 d55a4d113f9111a1d5c8d472971edaf3 451 SUPERFAMILY SSF55874 322 443 1.28E-19 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_15735 d55a4d113f9111a1d5c8d472971edaf3 451 Pfam PF17200 Single Cache domain 2 45 192 2.3E-44 T 11-10-2018 IPR033480 Single Cache domain 2 AL543_15735 d55a4d113f9111a1d5c8d472971edaf3 451 Gene3D G3DSA:3.30.450.20 29 203 9.4E-49 T 11-10-2018 AL543_15735 d55a4d113f9111a1d5c8d472971edaf3 451 Gene3D G3DSA:3.30.565.10 313 447 1.6E-31 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_20025 4d3aa9f7da8df91356973d9007745a0e 154 Pfam PF11143 Protein of unknown function (DUF2919) 3 147 8.1E-53 T 11-10-2018 IPR021318 Protein of unknown function DUF2919 AL543_11360 6439bbe7ccf46577428cd20d7e984f55 468 Gene3D G3DSA:1.20.1740.10 1 456 7.3E-62 T 11-10-2018 AL543_11360 6439bbe7ccf46577428cd20d7e984f55 468 Pfam PF13520 Amino acid permease 5 411 3.3E-68 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AL543_11360 6439bbe7ccf46577428cd20d7e984f55 468 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 3 466 1.6E-159 T 11-10-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 AL543_11360 6439bbe7ccf46577428cd20d7e984f55 468 PIRSF PIRSF006060 1 468 1.8E-46 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AL543_12155 daf1bd211fafdcf128ddb85edf1288eb 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 343 538 8.6E-9 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL543_12155 daf1bd211fafdcf128ddb85edf1288eb 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 68 254 2.6E-13 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL543_12155 daf1bd211fafdcf128ddb85edf1288eb 541 SUPERFAMILY SSF161098 281 535 6.45E-39 T 11-10-2018 IPR035906 MetI-like superfamily AL543_12155 daf1bd211fafdcf128ddb85edf1288eb 541 Gene3D G3DSA:1.10.3720.10 283 541 4.5E-34 T 11-10-2018 IPR035906 MetI-like superfamily AL543_12155 daf1bd211fafdcf128ddb85edf1288eb 541 Gene3D G3DSA:1.10.3720.10 8 267 1.7E-54 T 11-10-2018 IPR035906 MetI-like superfamily AL543_12155 daf1bd211fafdcf128ddb85edf1288eb 541 SUPERFAMILY SSF161098 6 263 3.01E-45 T 11-10-2018 IPR035906 MetI-like superfamily AL543_07125 296d4a3a1c93fb7cb50412c5147f1d60 298 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 65 271 2.2E-47 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AL543_07125 296d4a3a1c93fb7cb50412c5147f1d60 298 Pfam PF00717 Peptidase S24-like 85 158 4.1E-21 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AL543_07125 296d4a3a1c93fb7cb50412c5147f1d60 298 ProSitePatterns PS00501 Signal peptidases I serine active site. 88 95 - T 11-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 AL543_07125 296d4a3a1c93fb7cb50412c5147f1d60 298 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 143 155 8.5E-27 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AL543_07125 296d4a3a1c93fb7cb50412c5147f1d60 298 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 231 250 8.5E-27 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AL543_07125 296d4a3a1c93fb7cb50412c5147f1d60 298 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 79 95 8.5E-27 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AL543_07125 296d4a3a1c93fb7cb50412c5147f1d60 298 Pfam PF10502 Signal peptidase, peptidase S26 228 268 1.5E-6 T 11-10-2018 IPR019533 Peptidase S26 AL543_07125 296d4a3a1c93fb7cb50412c5147f1d60 298 Gene3D G3DSA:2.10.109.10 77 271 9.1E-74 T 11-10-2018 AL543_07125 296d4a3a1c93fb7cb50412c5147f1d60 298 ProSitePatterns PS00760 Signal peptidases I lysine active site. 145 157 - T 11-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 AL543_07125 296d4a3a1c93fb7cb50412c5147f1d60 298 Gene3D G3DSA:2.170.230.10 154 230 9.1E-74 T 11-10-2018 AL543_07125 296d4a3a1c93fb7cb50412c5147f1d60 298 ProSitePatterns PS00761 Signal peptidases I signature 3. 236 249 - T 11-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 AL543_07125 296d4a3a1c93fb7cb50412c5147f1d60 298 SUPERFAMILY SSF51306 77 297 1.31E-69 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily AL543_08250 b7890620427e687141ebc32c9e741cbc 105 Hamap MF_00744 Met repressor [metJ]. 1 105 35.123 T 11-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 AL543_08250 b7890620427e687141ebc32c9e741cbc 105 SUPERFAMILY SSF47598 3 104 4.0E-56 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 AL543_08250 b7890620427e687141ebc32c9e741cbc 105 Gene3D G3DSA:1.10.140.10 2 105 3.3E-56 T 11-10-2018 IPR023453 Methionine repressor MetJ domain superfamily AL543_08250 b7890620427e687141ebc32c9e741cbc 105 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 4.0E-48 T 11-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 AL543_08250 b7890620427e687141ebc32c9e741cbc 105 Pfam PF01340 Met Apo-repressor, MetJ 3 99 9.3E-59 T 11-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 AL543_19215 8efd81e01e24892f7045549fa78fef13 646 SUPERFAMILY SSF52540 189 598 1.96E-9 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_19215 8efd81e01e24892f7045549fa78fef13 646 SMART SM00491 477 606 2.1E-47 T 11-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AL543_19215 8efd81e01e24892f7045549fa78fef13 646 SMART SM00487 17 302 0.0037 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL543_19215 8efd81e01e24892f7045549fa78fef13 646 Gene3D G3DSA:3.40.50.300 19 287 1.9E-49 T 11-10-2018 AL543_19215 8efd81e01e24892f7045549fa78fef13 646 SUPERFAMILY SSF52540 16 602 3.51E-24 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_19215 8efd81e01e24892f7045549fa78fef13 646 Pfam PF13307 Helicase C-terminal domain 462 619 4.1E-35 T 11-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AL543_19215 8efd81e01e24892f7045549fa78fef13 646 Gene3D G3DSA:3.40.50.300 445 636 1.6E-37 T 11-10-2018 AL543_09070 91c8d567dde3bcfb857b13de4b94b84d 82 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 81 24.536 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 AL543_09070 91c8d567dde3bcfb857b13de4b94b84d 82 Pfam PF02416 mttA/Hcf106 family 4 55 4.9E-15 T 11-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 AL543_09070 91c8d567dde3bcfb857b13de4b94b84d 82 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 1.9E-22 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 AL543_05030 60f2643c2aacabc9387c947c2f333653 96 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 83 1.4E-14 T 11-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AL543_05030 60f2643c2aacabc9387c947c2f333653 96 Gene3D G3DSA:3.30.2310.20 1 95 8.3E-29 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily AL543_05030 60f2643c2aacabc9387c947c2f333653 96 SUPERFAMILY SSF143011 1 82 3.53E-23 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily AL543_05030 60f2643c2aacabc9387c947c2f333653 96 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 4 86 3.4E-9 T 11-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AL543_13200 6ca10d2f5345f569d8ff6a7464b85680 421 Pfam PF01266 FAD dependent oxidoreductase 4 398 7.4E-72 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL543_13200 6ca10d2f5345f569d8ff6a7464b85680 421 SUPERFAMILY SSF54373 271 361 3.01E-16 T 11-10-2018 AL543_13200 6ca10d2f5345f569d8ff6a7464b85680 421 SUPERFAMILY SSF51905 1 408 1.05E-54 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_13200 6ca10d2f5345f569d8ff6a7464b85680 421 Gene3D G3DSA:3.30.9.10 135 363 4.3E-54 T 11-10-2018 AL543_13200 6ca10d2f5345f569d8ff6a7464b85680 421 Gene3D G3DSA:3.50.50.60 4 59 4.3E-11 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_13200 6ca10d2f5345f569d8ff6a7464b85680 421 Gene3D G3DSA:3.50.50.60 96 405 4.3E-54 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_13200 6ca10d2f5345f569d8ff6a7464b85680 421 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 2 412 47.483 T 11-10-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 AL543_19470 408935e397d748e2cc43d3f0102ebdf7 397 SUPERFAMILY SSF47226 277 366 6.28E-16 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AL543_19470 408935e397d748e2cc43d3f0102ebdf7 397 Gene3D G3DSA:1.20.120.160 280 391 5.6E-17 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AL543_19470 408935e397d748e2cc43d3f0102ebdf7 397 Pfam PF01627 Hpt domain 301 367 1.0E-8 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AL543_01275 63752ab96e430150ecb2c4722eb62e8d 265 Pfam PF00106 short chain dehydrogenase 7 197 3.5E-37 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_01275 63752ab96e430150ecb2c4722eb62e8d 265 Gene3D G3DSA:3.40.50.720 1 263 3.3E-54 T 11-10-2018 AL543_01275 63752ab96e430150ecb2c4722eb62e8d 265 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL543_01275 63752ab96e430150ecb2c4722eb62e8d 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 5.5E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_01275 63752ab96e430150ecb2c4722eb62e8d 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 5.5E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_01275 63752ab96e430150ecb2c4722eb62e8d 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 5.5E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_01275 63752ab96e430150ecb2c4722eb62e8d 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.5E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_01275 63752ab96e430150ecb2c4722eb62e8d 265 SUPERFAMILY SSF51735 1 261 6.93E-53 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_01275 63752ab96e430150ecb2c4722eb62e8d 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 2.2E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_01275 63752ab96e430150ecb2c4722eb62e8d 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 2.2E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_01275 63752ab96e430150ecb2c4722eb62e8d 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 2.2E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_01275 63752ab96e430150ecb2c4722eb62e8d 265 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 186 0.0074 T 11-10-2018 AL543_01760 887f218d86409c7f661bae56936dda9a 228 Gene3D G3DSA:3.40.30.10 8 84 4.8E-22 T 11-10-2018 AL543_01760 887f218d86409c7f661bae56936dda9a 228 TIGRFAM TIGR02182 GRXB: glutaredoxin, GrxB family 2 208 5.1E-72 T 11-10-2018 IPR011901 Glutaredoxin-2 GO:0005829|GO:0097573 AL543_01760 887f218d86409c7f661bae56936dda9a 228 SUPERFAMILY SSF47616 76 210 6.19E-42 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AL543_01760 887f218d86409c7f661bae56936dda9a 228 Pfam PF04399 Glutaredoxin 2, C terminal domain 87 210 1.8E-34 T 11-10-2018 IPR007494 Glutaredoxin 2, C-terminal AL543_01760 887f218d86409c7f661bae56936dda9a 228 SUPERFAMILY SSF52833 1 76 1.47E-14 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL543_01760 887f218d86409c7f661bae56936dda9a 228 Gene3D G3DSA:1.20.1050.10 93 212 1.4E-23 T 11-10-2018 AL543_01760 887f218d86409c7f661bae56936dda9a 228 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 72 7.3E-11 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL543_05485 87e9aa0429d90b9555e0515217c2e74e 186 Pfam PF11665 Protein of unknown function (DUF3265) 13 40 4.5E-13 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL543_17450 5429731d07d20c0ce140219ff6acda60 219 Gene3D G3DSA:1.10.10.10 123 219 2.6E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_17450 5429731d07d20c0ce140219ff6acda60 219 Gene3D G3DSA:3.40.50.2300 1 122 2.0E-36 T 11-10-2018 AL543_17450 5429731d07d20c0ce140219ff6acda60 219 SMART SM00862 145 216 3.2E-23 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL543_17450 5429731d07d20c0ce140219ff6acda60 219 Pfam PF00072 Response regulator receiver domain 3 113 2.2E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_17450 5429731d07d20c0ce140219ff6acda60 219 SMART SM00448 1 112 5.7E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_17450 5429731d07d20c0ce140219ff6acda60 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 2.4E-22 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL543_17450 5429731d07d20c0ce140219ff6acda60 219 SUPERFAMILY SSF46894 119 217 7.37E-27 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL543_17450 5429731d07d20c0ce140219ff6acda60 219 SUPERFAMILY SSF52172 1 118 8.4E-36 T 11-10-2018 IPR011006 CheY-like superfamily AL543_18785 0e74f782b3685458a38697f91ba59efc 487 Pfam PF01943 Polysaccharide biosynthesis protein 19 275 5.5E-14 T 11-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 AL543_15005 95bcf7113520601f2dca237f6716d4f6 241 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 70 240 6.3E-60 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AL543_15005 95bcf7113520601f2dca237f6716d4f6 241 Gene3D G3DSA:3.30.70.1560 130 229 1.0E-40 T 11-10-2018 AL543_15005 95bcf7113520601f2dca237f6716d4f6 241 Gene3D G3DSA:3.30.70.580 54 129 1.8E-27 T 11-10-2018 AL543_15005 95bcf7113520601f2dca237f6716d4f6 241 SUPERFAMILY SSF55120 63 240 4.16E-45 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL543_15005 95bcf7113520601f2dca237f6716d4f6 241 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 101 115 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AL543_15005 95bcf7113520601f2dca237f6716d4f6 241 Pfam PF00849 RNA pseudouridylate synthase 66 210 2.7E-14 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL543_03715 12a9fa2fd20a28cbcabe1294d1432b91 189 SUPERFAMILY SSF103088 86 188 1.57E-23 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL543_03715 12a9fa2fd20a28cbcabe1294d1432b91 189 Gene3D G3DSA:3.30.1330.60 55 185 3.3E-24 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL543_03715 12a9fa2fd20a28cbcabe1294d1432b91 189 Pfam PF00691 OmpA family 88 179 1.6E-17 T 11-10-2018 IPR006665 OmpA-like domain AL543_03715 12a9fa2fd20a28cbcabe1294d1432b91 189 PRINTS PR01021 OMPA domain signature 88 110 2.7E-5 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL543_03715 12a9fa2fd20a28cbcabe1294d1432b91 189 PRINTS PR01021 OMPA domain signature 131 147 2.7E-5 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL543_12545 1dd8b7b8930c2fd1b95a5e5d074309ac 171 Pfam PF01252 Signal peptidase (SPase) II 19 161 3.4E-38 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AL543_12545 1dd8b7b8930c2fd1b95a5e5d074309ac 171 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 10 167 17.163 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AL543_12545 1dd8b7b8930c2fd1b95a5e5d074309ac 171 ProSitePatterns PS00855 Signal peptidases II signature. 109 121 - T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AL543_12545 1dd8b7b8930c2fd1b95a5e5d074309ac 171 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 106 121 8.2E-19 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AL543_12545 1dd8b7b8930c2fd1b95a5e5d074309ac 171 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 142 158 8.2E-19 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AL543_12545 1dd8b7b8930c2fd1b95a5e5d074309ac 171 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 58 66 8.2E-19 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AL543_12545 1dd8b7b8930c2fd1b95a5e5d074309ac 171 TIGRFAM TIGR00077 lspA: signal peptidase II 8 166 5.5E-51 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AL543_13395 492a410bf0429b0c7485cc9c90337c47 107 SUPERFAMILY SSF54285 4 80 1.06E-24 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AL543_13395 492a410bf0429b0c7485cc9c90337c47 107 Hamap MF_00460 Protein RnfH [rnfH]. 6 96 24.825 T 11-10-2018 IPR005346 RnfH protein AL543_13395 492a410bf0429b0c7485cc9c90337c47 107 Gene3D G3DSA:3.10.20.280 1 90 8.2E-33 T 11-10-2018 IPR037021 RnfH superfamily AL543_13395 492a410bf0429b0c7485cc9c90337c47 107 Pfam PF03658 RnfH family Ubiquitin 6 88 2.7E-33 T 11-10-2018 IPR005346 RnfH protein AL543_02920 ccd21aeaa0fd5e0f581a98b3515f20ad 230 SMART SM01007 7 197 9.4E-66 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal AL543_02920 ccd21aeaa0fd5e0f581a98b3515f20ad 230 SUPERFAMILY SSF53639 2 220 5.49E-65 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily AL543_02920 ccd21aeaa0fd5e0f581a98b3515f20ad 230 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 196 3.8E-43 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal AL543_02920 ccd21aeaa0fd5e0f581a98b3515f20ad 230 Gene3D G3DSA:3.40.225.10 1 229 5.7E-57 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily AL543_01840 9479249f4e19a46470b1cbecbab52b5d 84 Gene3D G3DSA:3.40.30.10 1 84 2.0E-26 T 11-10-2018 AL543_01840 9479249f4e19a46470b1cbecbab52b5d 84 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 81 6.7E-33 T 11-10-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 AL543_01840 9479249f4e19a46470b1cbecbab52b5d 84 Pfam PF00462 Glutaredoxin 4 63 2.2E-22 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AL543_01840 9479249f4e19a46470b1cbecbab52b5d 84 PRINTS PR00160 Glutaredoxin signature 46 59 3.4E-12 T 11-10-2018 IPR014025 Glutaredoxin subgroup AL543_01840 9479249f4e19a46470b1cbecbab52b5d 84 PRINTS PR00160 Glutaredoxin signature 4 22 3.4E-12 T 11-10-2018 IPR014025 Glutaredoxin subgroup AL543_01840 9479249f4e19a46470b1cbecbab52b5d 84 PRINTS PR00160 Glutaredoxin signature 60 73 3.4E-12 T 11-10-2018 IPR014025 Glutaredoxin subgroup AL543_01840 9479249f4e19a46470b1cbecbab52b5d 84 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 11-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 AL543_01840 9479249f4e19a46470b1cbecbab52b5d 84 SUPERFAMILY SSF52833 1 83 4.44E-26 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL543_01055 6b7c564870d6e1d29df5dc30c0509183 224 SUPERFAMILY SSF46894 146 222 1.33E-22 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL543_01055 6b7c564870d6e1d29df5dc30c0509183 224 ProSitePatterns PS00622 LuxR-type HTH domain signature. 176 203 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_01055 6b7c564870d6e1d29df5dc30c0509183 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 192 204 4.5E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_01055 6b7c564870d6e1d29df5dc30c0509183 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 176 4.5E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_01055 6b7c564870d6e1d29df5dc30c0509183 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 192 4.5E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_01055 6b7c564870d6e1d29df5dc30c0509183 224 Gene3D G3DSA:1.10.10.10 157 222 7.1E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_01055 6b7c564870d6e1d29df5dc30c0509183 224 SMART SM00421 159 216 1.7E-24 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_01055 6b7c564870d6e1d29df5dc30c0509183 224 Pfam PF00196 Bacterial regulatory proteins, luxR family 161 215 1.9E-21 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_13860 93aa7c205978354c1bef44e2b5578fa6 321 SUPERFAMILY SSF102114 52 316 4.97E-69 T 11-10-2018 AL543_13860 93aa7c205978354c1bef44e2b5578fa6 321 SMART SM00729 84 293 4.2E-19 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AL543_13860 93aa7c205978354c1bef44e2b5578fa6 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 26 73 1.7E-8 T 11-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AL543_13860 93aa7c205978354c1bef44e2b5578fa6 321 PIRSF PIRSF005963 2 320 4.4E-130 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AL543_13860 93aa7c205978354c1bef44e2b5578fa6 321 Gene3D G3DSA:3.20.20.70 47 293 5.5E-25 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_13860 93aa7c205978354c1bef44e2b5578fa6 321 Pfam PF04055 Radical SAM superfamily 91 252 1.6E-18 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL543_13860 93aa7c205978354c1bef44e2b5578fa6 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 155.499 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AL543_13860 93aa7c205978354c1bef44e2b5578fa6 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 321 3.6E-150 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AL543_10390 d5c059da6959a63301b8258c7f963c9b 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 7.0E-34 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL543_10390 d5c059da6959a63301b8258c7f963c9b 90 SUPERFAMILY SSF47729 1 90 4.86E-33 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AL543_10390 d5c059da6959a63301b8258c7f963c9b 90 Gene3D G3DSA:4.10.520.10 1 90 3.4E-37 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AL543_10390 d5c059da6959a63301b8258c7f963c9b 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AL543_10390 d5c059da6959a63301b8258c7f963c9b 90 SMART SM00411 1 90 2.7E-44 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL543_10390 d5c059da6959a63301b8258c7f963c9b 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 3.0E-20 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL543_10390 d5c059da6959a63301b8258c7f963c9b 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 3.0E-20 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL543_10390 d5c059da6959a63301b8258c7f963c9b 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 3.0E-20 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL543_08065 6eff8bdac234a4361d483dc348327a79 404 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 121 132 - T 11-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL543_08065 6eff8bdac234a4361d483dc348327a79 404 SUPERFAMILY SSF69864 177 402 1.06E-84 T 11-10-2018 AL543_08065 6eff8bdac234a4361d483dc348327a79 404 SUPERFAMILY SSF52402 7 170 1.1E-47 T 11-10-2018 AL543_08065 6eff8bdac234a4361d483dc348327a79 404 Pfam PF00764 Arginosuccinate synthase 10 396 2.2E-144 T 11-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL543_08065 6eff8bdac234a4361d483dc348327a79 404 TIGRFAM TIGR00032 argG: argininosuccinate synthase 8 395 2.4E-134 T 11-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL543_08065 6eff8bdac234a4361d483dc348327a79 404 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 12 20 - T 11-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL543_08065 6eff8bdac234a4361d483dc348327a79 404 Gene3D G3DSA:3.90.1260.10 68 354 9.4E-145 T 11-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL543_08065 6eff8bdac234a4361d483dc348327a79 404 Hamap MF_00005 Argininosuccinate synthase [argG]. 6 402 52.192 T 11-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL543_08065 6eff8bdac234a4361d483dc348327a79 404 Gene3D G3DSA:3.40.50.620 9 177 9.4E-145 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL543_08065 6eff8bdac234a4361d483dc348327a79 404 Gene3D G3DSA:1.20.5.470 368 403 7.6E-7 T 11-10-2018 AL543_15630 e260a749b10f43c560509783a87c4e35 139 Gene3D G3DSA:1.10.8.640 31 116 8.2E-34 T 11-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily AL543_15630 e260a749b10f43c560509783a87c4e35 139 TIGRFAM TIGR03147 cyt_nit_nrfF: cytochrome c nitrite reductase, accessory protein NrfF 24 139 2.7E-50 T 11-10-2018 IPR017565 Formate-dependent nitrite reductase complex, subunit NrfF AL543_15630 e260a749b10f43c560509783a87c4e35 139 Pfam PF03918 Cytochrome C biogenesis protein 30 138 1.8E-43 T 11-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family AL543_04025 1b51d9fe7bfa026f6d4831558aa8d0ef 330 Gene3D G3DSA:3.40.50.1360 59 324 2.1E-82 T 11-10-2018 AL543_04025 1b51d9fe7bfa026f6d4831558aa8d0ef 330 Pfam PF04198 Putative sugar-binding domain 65 319 1.1E-79 T 11-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 AL543_04025 1b51d9fe7bfa026f6d4831558aa8d0ef 330 Gene3D G3DSA:1.10.10.60 8 58 1.7E-18 T 11-10-2018 AL543_04025 1b51d9fe7bfa026f6d4831558aa8d0ef 330 SUPERFAMILY SSF100950 69 319 3.52E-66 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AL543_12845 a7c9e8d8ebe0f914f43f6ea91d1e6f71 500 SUPERFAMILY SSF53067 11 131 1.88E-36 T 11-10-2018 AL543_12845 a7c9e8d8ebe0f914f43f6ea91d1e6f71 500 Pfam PF02541 Ppx/GppA phosphatase family 24 306 1.5E-86 T 11-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 AL543_12845 a7c9e8d8ebe0f914f43f6ea91d1e6f71 500 Gene3D G3DSA:1.10.3210.10 308 500 1.3E-57 T 11-10-2018 AL543_12845 a7c9e8d8ebe0f914f43f6ea91d1e6f71 500 Gene3D G3DSA:3.30.420.40 12 301 3.1E-93 T 11-10-2018 AL543_12845 a7c9e8d8ebe0f914f43f6ea91d1e6f71 500 SUPERFAMILY SSF109604 311 499 4.94E-47 T 11-10-2018 AL543_12845 a7c9e8d8ebe0f914f43f6ea91d1e6f71 500 Gene3D G3DSA:3.30.420.150 115 293 3.1E-93 T 11-10-2018 AL543_12845 a7c9e8d8ebe0f914f43f6ea91d1e6f71 500 PIRSF PIRSF001267 1 500 4.3E-204 T 11-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 AL543_12845 a7c9e8d8ebe0f914f43f6ea91d1e6f71 500 SUPERFAMILY SSF53067 135 307 9.72E-48 T 11-10-2018 AL543_12845 a7c9e8d8ebe0f914f43f6ea91d1e6f71 500 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 10 304 9.9E-105 T 11-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 AL543_12390 1c25c2084fbf0236d822b3b41ddce6cd 684 SMART SM00052 423 669 8.0E-108 T 11-10-2018 IPR001633 EAL domain AL543_12390 1c25c2084fbf0236d822b3b41ddce6cd 684 Pfam PF00563 EAL domain 430 664 3.2E-74 T 11-10-2018 IPR001633 EAL domain AL543_12390 1c25c2084fbf0236d822b3b41ddce6cd 684 Pfam PF00990 Diguanylate cyclase, GGDEF domain 256 409 1.1E-43 T 11-10-2018 IPR000160 GGDEF domain AL543_12390 1c25c2084fbf0236d822b3b41ddce6cd 684 SUPERFAMILY SSF141868 430 677 4.45E-86 T 11-10-2018 IPR035919 EAL domain superfamily AL543_12390 1c25c2084fbf0236d822b3b41ddce6cd 684 Gene3D G3DSA:3.30.450.20 19 131 4.9E-12 T 11-10-2018 AL543_12390 1c25c2084fbf0236d822b3b41ddce6cd 684 SMART SM00267 245 413 3.8E-60 T 11-10-2018 IPR000160 GGDEF domain AL543_12390 1c25c2084fbf0236d822b3b41ddce6cd 684 SUPERFAMILY SSF55785 118 203 1.24E-7 T 11-10-2018 IPR035965 PAS domain superfamily AL543_12390 1c25c2084fbf0236d822b3b41ddce6cd 684 SUPERFAMILY SSF55785 16 121 1.56E-10 T 11-10-2018 IPR035965 PAS domain superfamily AL543_12390 1c25c2084fbf0236d822b3b41ddce6cd 684 SMART SM00091 134 201 2.8 T 11-10-2018 IPR000014 PAS domain AL543_12390 1c25c2084fbf0236d822b3b41ddce6cd 684 SMART SM00091 11 77 7.0E-5 T 11-10-2018 IPR000014 PAS domain AL543_12390 1c25c2084fbf0236d822b3b41ddce6cd 684 SUPERFAMILY SSF55073 261 415 4.94E-47 T 11-10-2018 IPR029787 Nucleotide cyclase AL543_12390 1c25c2084fbf0236d822b3b41ddce6cd 684 Gene3D G3DSA:3.30.70.270 256 419 2.5E-52 T 11-10-2018 AL543_12390 1c25c2084fbf0236d822b3b41ddce6cd 684 Pfam PF08448 PAS fold 18 122 1.8E-6 T 11-10-2018 IPR013656 PAS fold-4 AL543_12390 1c25c2084fbf0236d822b3b41ddce6cd 684 Gene3D G3DSA:3.30.450.20 132 236 9.7E-7 T 11-10-2018 AL543_12390 1c25c2084fbf0236d822b3b41ddce6cd 684 Gene3D G3DSA:3.20.20.450 424 679 3.9E-96 T 11-10-2018 IPR035919 EAL domain superfamily AL543_12390 1c25c2084fbf0236d822b3b41ddce6cd 684 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 12 123 1.1E-8 T 11-10-2018 IPR000014 PAS domain AL543_12390 1c25c2084fbf0236d822b3b41ddce6cd 684 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 254 410 2.0E-38 T 11-10-2018 IPR000160 GGDEF domain AL543_12390 1c25c2084fbf0236d822b3b41ddce6cd 684 Pfam PF13188 PAS domain 136 182 2.1E-5 T 11-10-2018 IPR000014 PAS domain AL543_19680 32bfa21a9961d6f4945d9957ef2b3c92 198 SUPERFAMILY SSF54593 2 196 4.33E-65 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL543_19680 32bfa21a9961d6f4945d9957ef2b3c92 198 Pfam PF06185 YecM protein 13 196 1.1E-66 T 11-10-2018 IPR010393 Protein of unknown function DUF991 AL543_19680 32bfa21a9961d6f4945d9957ef2b3c92 198 Gene3D G3DSA:3.10.180.10 7 198 1.8E-64 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL543_06070 a2af6913791070d5f2b90e99fa30268d 206 SUPERFAMILY SSF53098 15 204 4.1E-70 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_06070 a2af6913791070d5f2b90e99fa30268d 206 Hamap MF_00052_B Ribonuclease HII [rnhB]. 20 199 37.756 T 11-10-2018 IPR022898 Ribonuclease HII GO:0004523 AL543_06070 a2af6913791070d5f2b90e99fa30268d 206 Gene3D G3DSA:3.30.420.10 11 205 1.4E-76 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AL543_06070 a2af6913791070d5f2b90e99fa30268d 206 Pfam PF01351 Ribonuclease HII 22 196 1.7E-38 T 11-10-2018 IPR024567 Ribonuclease HII/HIII domain AL543_11510 708642b285470d1f6b52d8cf34d8c256 208 Gene3D G3DSA:1.10.340.30 39 153 2.0E-41 T 11-10-2018 AL543_11510 708642b285470d1f6b52d8cf34d8c256 208 SMART SM00478 52 202 1.9E-5 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AL543_11510 708642b285470d1f6b52d8cf34d8c256 208 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 49 183 3.1E-6 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AL543_11510 708642b285470d1f6b52d8cf34d8c256 208 SUPERFAMILY SSF48150 41 201 7.85E-27 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AL543_11510 708642b285470d1f6b52d8cf34d8c256 208 Gene3D G3DSA:1.10.1670.40 18 199 2.0E-41 T 11-10-2018 AL543_10060 17a0ef24c9ec4e6174bc540fd3aa8361 226 PIRSF PIRSF006324 1 217 2.1E-54 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL543_10060 17a0ef24c9ec4e6174bc540fd3aa8361 226 Pfam PF01810 LysE type translocator 16 211 6.5E-41 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL543_19225 e59f291a1f3f42ca53e9c37d4425d625 277 Pfam PF00551 Formyl transferase 82 259 4.1E-49 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL543_19225 e59f291a1f3f42ca53e9c37d4425d625 277 Pfam PF01842 ACT domain 5 64 7.2E-8 T 11-10-2018 IPR002912 ACT domain AL543_19225 e59f291a1f3f42ca53e9c37d4425d625 277 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 277 45.165 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AL543_19225 e59f291a1f3f42ca53e9c37d4425d625 277 SUPERFAMILY SSF53328 82 276 1.22E-59 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL543_19225 e59f291a1f3f42ca53e9c37d4425d625 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 229 251 6.8E-66 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AL543_19225 e59f291a1f3f42ca53e9c37d4425d625 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 83 105 6.8E-66 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AL543_19225 e59f291a1f3f42ca53e9c37d4425d625 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 38 50 6.8E-66 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AL543_19225 e59f291a1f3f42ca53e9c37d4425d625 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 6 32 6.8E-66 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AL543_19225 e59f291a1f3f42ca53e9c37d4425d625 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 251 276 6.8E-66 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AL543_19225 e59f291a1f3f42ca53e9c37d4425d625 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 105 132 6.8E-66 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AL543_19225 e59f291a1f3f42ca53e9c37d4425d625 277 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 5 277 8.0E-123 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AL543_19225 e59f291a1f3f42ca53e9c37d4425d625 277 PIRSF PIRSF036480 1 277 6.2E-111 T 11-10-2018 AL543_19225 e59f291a1f3f42ca53e9c37d4425d625 277 Gene3D G3DSA:3.40.50.170 82 277 5.4E-67 T 11-10-2018 AL543_19225 e59f291a1f3f42ca53e9c37d4425d625 277 Gene3D G3DSA:3.30.70.260 1 76 1.7E-15 T 11-10-2018 AL543_19225 e59f291a1f3f42ca53e9c37d4425d625 277 SUPERFAMILY SSF55021 4 55 6.66E-9 T 11-10-2018 AL543_08275 4cb59f9d0cca0d2a6686f801357962c2 335 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 321 8.1E-131 T 11-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 AL543_08275 4cb59f9d0cca0d2a6686f801357962c2 335 SUPERFAMILY SSF56655 1 324 6.71E-109 T 11-10-2018 AL543_08275 4cb59f9d0cca0d2a6686f801357962c2 335 Gene3D G3DSA:3.40.190.90 109 276 1.6E-127 T 11-10-2018 AL543_08275 4cb59f9d0cca0d2a6686f801357962c2 335 Gene3D G3DSA:3.30.540.10 7 319 1.6E-127 T 11-10-2018 AL543_08275 4cb59f9d0cca0d2a6686f801357962c2 335 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 329 2.4E-171 T 11-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 AL543_08275 4cb59f9d0cca0d2a6686f801357962c2 335 PIRSF PIRSF004532 1 331 4.3E-136 T 11-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 AL543_03905 1c498b4407f84d737506879c823a8cc6 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 72 87 3.0E-11 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL543_03905 1c498b4407f84d737506879c823a8cc6 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 25 40 3.0E-11 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL543_03905 1c498b4407f84d737506879c823a8cc6 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 72 3.0E-11 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL543_03905 1c498b4407f84d737506879c823a8cc6 105 Pfam PF12840 Helix-turn-helix domain 22 80 4.5E-8 T 11-10-2018 AL543_03905 1c498b4407f84d737506879c823a8cc6 105 SUPERFAMILY SSF46785 16 104 3.46E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_03905 1c498b4407f84d737506879c823a8cc6 105 SMART SM00418 23 101 2.4E-17 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL543_03905 1c498b4407f84d737506879c823a8cc6 105 Gene3D G3DSA:1.10.10.10 10 105 1.6E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_06250 c8b2c5b6582afe32b8fb823543b0483d 451 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 15 36 4.9E-10 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL543_06250 c8b2c5b6582afe32b8fb823543b0483d 451 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 311 330 4.9E-10 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL543_06250 c8b2c5b6582afe32b8fb823543b0483d 451 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 44 63 4.9E-10 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL543_06250 c8b2c5b6582afe32b8fb823543b0483d 451 Pfam PF00209 Sodium:neurotransmitter symporter family 7 128 1.3E-22 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL543_06250 c8b2c5b6582afe32b8fb823543b0483d 451 Pfam PF00209 Sodium:neurotransmitter symporter family 152 449 8.0E-27 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL543_06250 c8b2c5b6582afe32b8fb823543b0483d 451 SUPERFAMILY SSF161070 7 450 1.22E-120 T 11-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 AL543_04320 a9a53a36a8ec9143436c405e45acd253 2054 Gene3D G3DSA:3.40.50.12780 552 953 8.5E-111 T 11-10-2018 AL543_04320 a9a53a36a8ec9143436c405e45acd253 2054 ProSitePatterns PS00455 Putative AMP-binding domain signature. 698 709 - T 11-10-2018 IPR020845 AMP-binding, conserved site AL543_04320 a9a53a36a8ec9143436c405e45acd253 2054 SUPERFAMILY SSF52777 1501 1668 1.89E-22 T 11-10-2018 AL543_04320 a9a53a36a8ec9143436c405e45acd253 2054 Gene3D G3DSA:3.30.559.10 1493 1671 1.5E-46 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AL543_04320 a9a53a36a8ec9143436c405e45acd253 2054 Gene3D G3DSA:3.30.559.10 98 278 1.5E-39 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AL543_04320 a9a53a36a8ec9143436c405e45acd253 2054 SUPERFAMILY SSF53335 1189 1335 5.31E-13 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL543_04320 a9a53a36a8ec9143436c405e45acd253 2054 Gene3D G3DSA:1.10.1200.10 1954 2029 1.6E-10 T 11-10-2018 IPR036736 ACP-like superfamily AL543_04320 a9a53a36a8ec9143436c405e45acd253 2054 Gene3D G3DSA:3.30.300.30 955 1066 1.4E-10 T 11-10-2018 AL543_04320 a9a53a36a8ec9143436c405e45acd253 2054 SUPERFAMILY SSF47336 1406 1474 6.67E-13 T 11-10-2018 IPR036736 ACP-like superfamily AL543_04320 a9a53a36a8ec9143436c405e45acd253 2054 Pfam PF00550 Phosphopantetheine attachment site 11 70 1.4E-9 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain AL543_04320 a9a53a36a8ec9143436c405e45acd253 2054 Pfam PF00550 Phosphopantetheine attachment site 1413 1473 5.4E-7 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain AL543_04320 a9a53a36a8ec9143436c405e45acd253 2054 Pfam PF00550 Phosphopantetheine attachment site 1968 2021 5.4E-7 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain AL543_04320 a9a53a36a8ec9143436c405e45acd253 2054 SUPERFAMILY SSF47336 5 92 1.57E-12 T 11-10-2018 IPR036736 ACP-like superfamily AL543_04320 a9a53a36a8ec9143436c405e45acd253 2054 Gene3D G3DSA:3.30.300.30 1319 1392 8.3E-13 T 11-10-2018 AL543_04320 a9a53a36a8ec9143436c405e45acd253 2054 Gene3D G3DSA:1.10.1200.10 1404 1474 2.2E-16 T 11-10-2018 IPR036736 ACP-like superfamily AL543_04320 a9a53a36a8ec9143436c405e45acd253 2054 SUPERFAMILY SSF56801 522 1421 7.98E-131 T 11-10-2018 AL543_04320 a9a53a36a8ec9143436c405e45acd253 2054 SUPERFAMILY SSF47336 1963 2022 6.02E-9 T 11-10-2018 IPR036736 ACP-like superfamily AL543_04320 a9a53a36a8ec9143436c405e45acd253 2054 SUPERFAMILY SSF52777 283 524 2.11E-38 T 11-10-2018 AL543_04320 a9a53a36a8ec9143436c405e45acd253 2054 Pfam PF00501 AMP-binding enzyme 561 960 2.5E-92 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AL543_04320 a9a53a36a8ec9143436c405e45acd253 2054 Gene3D G3DSA:1.10.1200.10 4 79 1.6E-21 T 11-10-2018 IPR036736 ACP-like superfamily AL543_04320 a9a53a36a8ec9143436c405e45acd253 2054 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 581 984 3.0E-118 T 11-10-2018 IPR010071 Amino acid adenylation domain AL543_04320 a9a53a36a8ec9143436c405e45acd253 2054 Gene3D G3DSA:3.40.50.150 1190 1306 6.1E-12 T 11-10-2018 AL543_04320 a9a53a36a8ec9143436c405e45acd253 2054 Pfam PF13847 Methyltransferase domain 1197 1304 1.3E-8 T 11-10-2018 IPR025714 Methyltransferase domain AL543_04320 a9a53a36a8ec9143436c405e45acd253 2054 SUPERFAMILY SSF52777 1674 1921 7.11E-41 T 11-10-2018 AL543_04320 a9a53a36a8ec9143436c405e45acd253 2054 Gene3D G3DSA:3.30.559.30 1673 1925 3.2E-75 T 11-10-2018 AL543_04320 a9a53a36a8ec9143436c405e45acd253 2054 Gene3D G3DSA:3.30.559.30 281 530 1.5E-70 T 11-10-2018 AL543_04320 a9a53a36a8ec9143436c405e45acd253 2054 Pfam PF00668 Condensation domain 1500 1922 1.3E-39 T 11-10-2018 IPR001242 Condensation domain AL543_04320 a9a53a36a8ec9143436c405e45acd253 2054 Pfam PF00668 Condensation domain 137 526 3.0E-31 T 11-10-2018 IPR001242 Condensation domain AL543_04320 a9a53a36a8ec9143436c405e45acd253 2054 SMART SM00823 Phosphopantetheine attachment site 1954 2025 0.0033 T 11-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AL543_04320 a9a53a36a8ec9143436c405e45acd253 2054 SMART SM00823 Phosphopantetheine attachment site 1410 1478 0.15 T 11-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AL543_04320 a9a53a36a8ec9143436c405e45acd253 2054 SMART SM00823 Phosphopantetheine attachment site 8 78 0.46 T 11-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AL543_04320 a9a53a36a8ec9143436c405e45acd253 2054 SUPERFAMILY SSF52777 137 277 1.45E-18 T 11-10-2018 AL543_12040 7fa1d50678c0b7976ddc09c3c7b54d52 601 Gene3D G3DSA:3.40.50.2300 367 595 4.3E-63 T 11-10-2018 AL543_12040 7fa1d50678c0b7976ddc09c3c7b54d52 601 Gene3D G3DSA:1.25.40.650 149 255 8.9E-17 T 11-10-2018 AL543_12040 7fa1d50678c0b7976ddc09c3c7b54d52 601 Hamap MF_01890 Penicillin-binding protein activator LpoA [lpoA]. 1 601 29.846 T 11-10-2018 IPR007443 Penicillin-binding protein activator LpoA AL543_12040 7fa1d50678c0b7976ddc09c3c7b54d52 601 Gene3D G3DSA:1.25.40.10 22 144 2.8E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_12040 7fa1d50678c0b7976ddc09c3c7b54d52 601 Pfam PF04348 LppC putative lipoprotein 39 599 1.4E-217 T 11-10-2018 IPR007443 Penicillin-binding protein activator LpoA AL543_12040 7fa1d50678c0b7976ddc09c3c7b54d52 601 SUPERFAMILY SSF53822 260 598 1.06E-68 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AL543_12040 7fa1d50678c0b7976ddc09c3c7b54d52 601 Gene3D G3DSA:3.40.50.2300 261 594 4.3E-63 T 11-10-2018 AL543_17025 c06e5b55bdf50ffd507b0737774aaabc 293 Gene3D G3DSA:1.10.3720.10 51 292 7.7E-49 T 11-10-2018 IPR035906 MetI-like superfamily AL543_17025 c06e5b55bdf50ffd507b0737774aaabc 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 128 288 4.7E-11 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL543_17025 c06e5b55bdf50ffd507b0737774aaabc 293 SUPERFAMILY SSF161098 55 282 2.49E-42 T 11-10-2018 IPR035906 MetI-like superfamily AL543_03245 9785ba7243acbe514ee01f16f75dbbc5 222 SUPERFAMILY SSF161098 9 202 3.66E-32 T 11-10-2018 IPR035906 MetI-like superfamily AL543_03245 9785ba7243acbe514ee01f16f75dbbc5 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 6 112 2.5E-16 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 AL543_03245 9785ba7243acbe514ee01f16f75dbbc5 222 Gene3D G3DSA:1.10.3720.10 3 217 1.3E-41 T 11-10-2018 IPR035906 MetI-like superfamily AL543_03245 9785ba7243acbe514ee01f16f75dbbc5 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 29 215 1.7E-13 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL543_16930 fad6514441d71a6f7faa4f49e448b0ca 302 SUPERFAMILY SSF53067 1 299 1.92E-57 T 11-10-2018 AL543_16930 fad6514441d71a6f7faa4f49e448b0ca 302 ProSitePatterns PS01125 ROK family signature. 130 157 - T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AL543_16930 fad6514441d71a6f7faa4f49e448b0ca 302 Hamap MF_01271 N-acetyl-D-glucosamine kinase [nagK]. 1 302 64.132 T 11-10-2018 IPR023505 N-acetyl-D-glucosamine kinase GO:0045127 KEGG: 00520+2.7.1.59|MetaCyc: PWY-6517|MetaCyc: PWY-6906 AL543_16930 fad6514441d71a6f7faa4f49e448b0ca 302 Gene3D G3DSA:3.30.420.40 4 297 3.3E-101 T 11-10-2018 AL543_16930 fad6514441d71a6f7faa4f49e448b0ca 302 Gene3D G3DSA:3.30.420.40 119 290 3.3E-101 T 11-10-2018 AL543_16930 fad6514441d71a6f7faa4f49e448b0ca 302 Pfam PF00480 ROK family 2 300 1.0E-74 T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AL543_14525 bed292ed81950f39bd67183933cf4f2d 255 SUPERFAMILY SSF52540 4 233 5.99E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_14525 bed292ed81950f39bd67183933cf4f2d 255 Gene3D G3DSA:3.40.50.300 1 254 1.5E-68 T 11-10-2018 AL543_14525 bed292ed81950f39bd67183933cf4f2d 255 Pfam PF00005 ABC transporter 18 166 3.5E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_14525 bed292ed81950f39bd67183933cf4f2d 255 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_14525 bed292ed81950f39bd67183933cf4f2d 255 SMART SM00382 26 223 5.1E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_16220 c04767718f2879a2288d05c58b2b1fbb 633 Pfam PF00012 Hsp70 protein 12 336 3.0E-16 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL543_16220 c04767718f2879a2288d05c58b2b1fbb 633 Gene3D G3DSA:3.30.420.40 221 301 1.7E-5 T 11-10-2018 AL543_16220 c04767718f2879a2288d05c58b2b1fbb 633 Gene3D G3DSA:3.30.420.40 6 220 5.2E-26 T 11-10-2018 AL543_16220 c04767718f2879a2288d05c58b2b1fbb 633 SUPERFAMILY SSF53067 9 204 1.51E-26 T 11-10-2018 AL543_16220 c04767718f2879a2288d05c58b2b1fbb 633 SUPERFAMILY SSF53067 217 473 2.01E-26 T 11-10-2018 AL543_16220 c04767718f2879a2288d05c58b2b1fbb 633 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 222 235 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AL543_16220 c04767718f2879a2288d05c58b2b1fbb 633 PRINTS PR00301 70kDa heat shock protein signature 414 434 7.8E-9 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL543_16220 c04767718f2879a2288d05c58b2b1fbb 633 PRINTS PR00301 70kDa heat shock protein signature 161 181 7.8E-9 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL543_16220 c04767718f2879a2288d05c58b2b1fbb 633 PRINTS PR00301 70kDa heat shock protein signature 10 23 7.8E-9 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL543_16220 c04767718f2879a2288d05c58b2b1fbb 633 PRINTS PR00301 70kDa heat shock protein signature 228 238 7.8E-9 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL543_16220 c04767718f2879a2288d05c58b2b1fbb 633 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 14 21 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AL543_16800 3c6e9fc9285204b9a97005f3c9966ed3 161 SUPERFAMILY SSF54637 12 153 9.7E-14 T 11-10-2018 IPR029069 HotDog domain superfamily AL543_16800 3c6e9fc9285204b9a97005f3c9966ed3 161 Gene3D G3DSA:3.10.129.10 6 140 4.0E-22 T 11-10-2018 AL543_16800 3c6e9fc9285204b9a97005f3c9966ed3 161 Pfam PF14539 Domain of unknown function (DUF4442) 17 81 9.2E-8 T 11-10-2018 IPR027961 Protein of unknown function DUF4442 AL543_17270 45f8fe05a890fc5f2abdc25a21b57fb4 255 SUPERFAMILY SSF53850 29 255 1.09E-32 T 11-10-2018 AL543_17270 45f8fe05a890fc5f2abdc25a21b57fb4 255 Gene3D G3DSA:3.40.190.10 34 254 8.7E-23 T 11-10-2018 AL543_17270 45f8fe05a890fc5f2abdc25a21b57fb4 255 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 33 239 9.7E-19 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL543_17270 45f8fe05a890fc5f2abdc25a21b57fb4 255 Gene3D G3DSA:3.40.190.10 114 210 8.7E-23 T 11-10-2018 AL543_09055 3fe458b79cb6fb153fd0791fc8c67159 448 TIGRFAM TIGR00797 matE: MATE efflux family protein 23 417 5.4E-77 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL543_09055 3fe458b79cb6fb153fd0791fc8c67159 448 Pfam PF01554 MatE 249 399 1.4E-14 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL543_09055 3fe458b79cb6fb153fd0791fc8c67159 448 Pfam PF01554 MatE 23 183 4.1E-26 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL543_05725 ab1c49d71b0c36d30056b87588b7d576 335 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 328 3.5E-25 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL543_05725 ab1c49d71b0c36d30056b87588b7d576 335 SUPERFAMILY SSF161098 98 311 5.89E-10 T 11-10-2018 IPR035906 MetI-like superfamily AL543_05725 ab1c49d71b0c36d30056b87588b7d576 335 Gene3D G3DSA:1.10.3720.10 88 330 1.1E-12 T 11-10-2018 IPR035906 MetI-like superfamily AL543_07725 ab77033cbdc796a3f942db1bad36f8f8 206 Gene3D G3DSA:3.10.290.10 103 191 4.8E-36 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AL543_07725 ab77033cbdc796a3f942db1bad36f8f8 206 Pfam PF01479 S4 domain 97 143 4.9E-18 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07725 ab77033cbdc796a3f942db1bad36f8f8 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 11-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07725 ab77033cbdc796a3f942db1bad36f8f8 206 SMART SM01390 3 95 6.9E-50 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 AL543_07725 ab77033cbdc796a3f942db1bad36f8f8 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 6.9E-85 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 AL543_07725 ab77033cbdc796a3f942db1bad36f8f8 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 1.5E-32 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 AL543_07725 ab77033cbdc796a3f942db1bad36f8f8 206 Gene3D G3DSA:1.10.1050.10 1 102 8.8E-45 T 11-10-2018 AL543_07725 ab77033cbdc796a3f942db1bad36f8f8 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.328 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 AL543_07725 ab77033cbdc796a3f942db1bad36f8f8 206 SUPERFAMILY SSF55174 3 206 2.62E-72 T 11-10-2018 AL543_07725 ab77033cbdc796a3f942db1bad36f8f8 206 SMART SM00363 96 160 1.3E-19 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_06495 ab7549cb8ae041525e62d11e973ab334 380 PIRSF PIRSF004810 1 380 1.4E-111 T 11-10-2018 IPR014047 Chromate transporter, long chain AL543_06495 ab7549cb8ae041525e62d11e973ab334 380 TIGRFAM TIGR00937 2A51: chromate efflux transporter 8 374 2.4E-87 T 11-10-2018 IPR014047 Chromate transporter, long chain AL543_06495 ab7549cb8ae041525e62d11e973ab334 380 Pfam PF02417 Chromate transporter 211 373 3.7E-33 T 11-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 AL543_06495 ab7549cb8ae041525e62d11e973ab334 380 Pfam PF02417 Chromate transporter 3 168 2.2E-32 T 11-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 AL543_01515 03438b62ad6a3035a496dfba845943ab 1085 SMART SM00245 873 1057 4.6E-4 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AL543_01515 03438b62ad6a3035a496dfba845943ab 1085 Gene3D G3DSA:2.120.10.60 31 318 9.5E-61 T 11-10-2018 AL543_01515 03438b62ad6a3035a496dfba845943ab 1085 Pfam PF03572 Peptidase family S41 901 1055 2.0E-19 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AL543_01515 03438b62ad6a3035a496dfba845943ab 1085 SUPERFAMILY SSF82171 333 683 5.89E-22 T 11-10-2018 AL543_01515 03438b62ad6a3035a496dfba845943ab 1085 Gene3D G3DSA:2.120.10.30 325 416 3.3E-8 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AL543_01515 03438b62ad6a3035a496dfba845943ab 1085 Gene3D G3DSA:2.120.10.30 417 580 1.0E-11 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AL543_01515 03438b62ad6a3035a496dfba845943ab 1085 SUPERFAMILY SSF50156 791 869 2.56E-10 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AL543_01515 03438b62ad6a3035a496dfba845943ab 1085 Gene3D G3DSA:2.30.42.10 789 871 4.0E-7 T 11-10-2018 AL543_01515 03438b62ad6a3035a496dfba845943ab 1085 Pfam PF14684 Tricorn protease C1 domain 710 775 6.7E-24 T 11-10-2018 IPR028204 Tricorn protease C1 domain AL543_01515 03438b62ad6a3035a496dfba845943ab 1085 SUPERFAMILY SSF52096 706 1081 5.3E-59 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AL543_01515 03438b62ad6a3035a496dfba845943ab 1085 Pfam PF07676 WD40-like Beta Propeller Repeat 129 144 0.0049 T 11-10-2018 IPR011659 WD40-like Beta Propeller AL543_01515 03438b62ad6a3035a496dfba845943ab 1085 Pfam PF07676 WD40-like Beta Propeller Repeat 229 263 7.5E-7 T 11-10-2018 IPR011659 WD40-like Beta Propeller AL543_01515 03438b62ad6a3035a496dfba845943ab 1085 Pfam PF07676 WD40-like Beta Propeller Repeat 44 57 0.16 T 11-10-2018 IPR011659 WD40-like Beta Propeller AL543_01515 03438b62ad6a3035a496dfba845943ab 1085 Pfam PF07676 WD40-like Beta Propeller Repeat 367 402 6.8E-9 T 11-10-2018 IPR011659 WD40-like Beta Propeller AL543_01515 03438b62ad6a3035a496dfba845943ab 1085 Pfam PF07676 WD40-like Beta Propeller Repeat 515 541 0.01 T 11-10-2018 IPR011659 WD40-like Beta Propeller AL543_01515 03438b62ad6a3035a496dfba845943ab 1085 Pfam PF07676 WD40-like Beta Propeller Repeat 78 105 8.1E-5 T 11-10-2018 IPR011659 WD40-like Beta Propeller AL543_01515 03438b62ad6a3035a496dfba845943ab 1085 Gene3D G3DSA:3.90.226.10 878 1085 4.9E-50 T 11-10-2018 AL543_01515 03438b62ad6a3035a496dfba845943ab 1085 PIRSF PIRSF036421 30 1085 3.5E-198 T 11-10-2018 IPR012393 Tricorn protease GO:0008236 AL543_01515 03438b62ad6a3035a496dfba845943ab 1085 Gene3D G3DSA:3.30.750.44 707 776 7.0E-14 T 11-10-2018 AL543_01515 03438b62ad6a3035a496dfba845943ab 1085 SUPERFAMILY SSF69304 43 314 1.11E-39 T 11-10-2018 AL543_13880 cd94b5d999fca3bdfe52cf2091aa95c4 263 Pfam PF05036 Sporulation related domain 188 256 4.8E-8 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 AL543_13880 cd94b5d999fca3bdfe52cf2091aa95c4 263 SUPERFAMILY SSF110997 187 256 9.29E-12 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AL543_13880 cd94b5d999fca3bdfe52cf2091aa95c4 263 Pfam PF03330 Lytic transglycolase 78 168 3.2E-29 T 11-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain AL543_13880 cd94b5d999fca3bdfe52cf2091aa95c4 263 SUPERFAMILY SSF50685 81 169 2.13E-11 T 11-10-2018 IPR036908 RlpA-like domain superfamily AL543_13880 cd94b5d999fca3bdfe52cf2091aa95c4 263 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 81 248 1.0E-47 T 11-10-2018 IPR012997 Rare lipoprotein A AL543_13880 cd94b5d999fca3bdfe52cf2091aa95c4 263 Gene3D G3DSA:2.40.40.10 78 172 2.0E-39 T 11-10-2018 IPR036908 RlpA-like domain superfamily AL543_13880 cd94b5d999fca3bdfe52cf2091aa95c4 263 Gene3D G3DSA:3.30.70.1070 187 257 4.4E-5 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AL543_13880 cd94b5d999fca3bdfe52cf2091aa95c4 263 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 11 171 25.625 T 11-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 AL543_13475 12b88937ba229e6372b4d06aa76df328 526 Gene3D G3DSA:1.10.530.10 283 461 6.4E-36 T 11-10-2018 AL543_13475 12b88937ba229e6372b4d06aa76df328 526 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 320 348 - T 11-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AL543_13475 12b88937ba229e6372b4d06aa76df328 526 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 278 1.9E-32 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL543_13475 12b88937ba229e6372b4d06aa76df328 526 Gene3D G3DSA:3.40.190.10 37 274 1.4E-72 T 11-10-2018 AL543_13475 12b88937ba229e6372b4d06aa76df328 526 SMART SM00062 43 279 4.9E-30 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL543_13475 12b88937ba229e6372b4d06aa76df328 526 Pfam PF01464 Transglycosylase SLT domain 310 412 1.2E-21 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 AL543_13475 12b88937ba229e6372b4d06aa76df328 526 Gene3D G3DSA:3.40.190.10 128 235 1.4E-72 T 11-10-2018 AL543_13475 12b88937ba229e6372b4d06aa76df328 526 SUPERFAMILY SSF53850 44 278 9.51E-36 T 11-10-2018 AL543_13475 12b88937ba229e6372b4d06aa76df328 526 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 9 481 48.819 T 11-10-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 AL543_13475 12b88937ba229e6372b4d06aa76df328 526 SUPERFAMILY SSF53955 257 461 6.19E-38 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AL543_04555 f51c7c508bd3a153d37c67dce536dfbf 540 SMART SM00283 278 539 2.9E-83 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_04555 f51c7c508bd3a153d37c67dce536dfbf 540 SUPERFAMILY SSF58104 231 540 2.62E-81 T 11-10-2018 AL543_04555 f51c7c508bd3a153d37c67dce536dfbf 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 14 8.4E-22 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL543_04555 f51c7c508bd3a153d37c67dce536dfbf 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 376 403 8.4E-22 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL543_04555 f51c7c508bd3a153d37c67dce536dfbf 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 405 434 8.4E-22 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL543_04555 f51c7c508bd3a153d37c67dce536dfbf 540 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 352 505 9.1E-44 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_04555 f51c7c508bd3a153d37c67dce536dfbf 540 Gene3D G3DSA:1.10.287.950 209 540 1.1E-75 T 11-10-2018 AL543_04555 f51c7c508bd3a153d37c67dce536dfbf 540 Pfam PF00672 HAMP domain 209 259 1.1E-11 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_04555 f51c7c508bd3a153d37c67dce536dfbf 540 SMART SM00304 209 263 1.8E-15 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_19725 ce8e8b7d78119ba739fecca06b5adfb7 260 SUPERFAMILY SSF81345 2 257 1.44E-39 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AL543_19725 ce8e8b7d78119ba739fecca06b5adfb7 260 Gene3D G3DSA:1.10.3470.10 5 259 1.8E-6 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AL543_19725 ce8e8b7d78119ba739fecca06b5adfb7 260 Pfam PF00950 ABC 3 transport family 1 255 6.9E-74 T 11-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 AL543_08455 8d18fa457fb3422a10b9e07ce7af6ed2 275 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 10 260 1.4E-111 T 11-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 AL543_08455 8d18fa457fb3422a10b9e07ce7af6ed2 275 Gene3D G3DSA:3.30.540.10 7 162 3.3E-45 T 11-10-2018 AL543_08455 8d18fa457fb3422a10b9e07ce7af6ed2 275 SUPERFAMILY SSF56655 6 273 3.66E-78 T 11-10-2018 AL543_08455 8d18fa457fb3422a10b9e07ce7af6ed2 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 65 81 7.4E-5 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL543_08455 8d18fa457fb3422a10b9e07ce7af6ed2 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 89 105 7.4E-5 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL543_08455 8d18fa457fb3422a10b9e07ce7af6ed2 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 43 63 7.4E-5 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL543_08455 8d18fa457fb3422a10b9e07ce7af6ed2 275 Pfam PF00459 Inositol monophosphatase family 14 253 1.3E-51 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL543_08455 8d18fa457fb3422a10b9e07ce7af6ed2 275 Gene3D G3DSA:3.40.190.80 163 264 4.1E-26 T 11-10-2018 AL543_08455 8d18fa457fb3422a10b9e07ce7af6ed2 275 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 10 262 39.072 T 11-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 AL543_08885 45f4b9e57616789c827d433c08f97631 239 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 105 201 3.2E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL543_08885 45f4b9e57616789c827d433c08f97631 239 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 206 1.6E-14 T 11-10-2018 AL543_08885 45f4b9e57616789c827d433c08f97631 239 SUPERFAMILY SSF56784 9 238 3.43E-37 T 11-10-2018 IPR036412 HAD-like superfamily AL543_08885 45f4b9e57616789c827d433c08f97631 239 Gene3D G3DSA:1.20.120.1600 24 110 2.4E-57 T 11-10-2018 AL543_08885 45f4b9e57616789c827d433c08f97631 239 Gene3D G3DSA:3.40.50.1000 12 231 2.4E-57 T 11-10-2018 IPR023214 HAD superfamily AL543_21240 bbcfac267688f094dbb169d83c8ff68e 77 Pfam PF12493 Protein of unknown function (DUF3709) 34 66 7.2E-21 T 11-10-2018 IPR022178 Protein of unknown function DUF3709 AL543_20950 bbcfac267688f094dbb169d83c8ff68e 77 Pfam PF12493 Protein of unknown function (DUF3709) 34 66 7.2E-21 T 11-10-2018 IPR022178 Protein of unknown function DUF3709 AL543_21270 bbcfac267688f094dbb169d83c8ff68e 77 Pfam PF12493 Protein of unknown function (DUF3709) 34 66 7.2E-21 T 11-10-2018 IPR022178 Protein of unknown function DUF3709 AL543_05000 bbcfac267688f094dbb169d83c8ff68e 77 Pfam PF12493 Protein of unknown function (DUF3709) 34 66 7.2E-21 T 11-10-2018 IPR022178 Protein of unknown function DUF3709 AL543_20500 704340e23d146c9d1a9f813375c18f55 287 Gene3D G3DSA:3.20.20.150 5 278 6.5E-82 T 11-10-2018 AL543_20500 704340e23d146c9d1a9f813375c18f55 287 Pfam PF05114 Protein of unknown function (DUF692) 10 268 7.5E-92 T 11-10-2018 IPR007801 Uncharacterised protein family UPF0276 AL543_20500 704340e23d146c9d1a9f813375c18f55 287 SUPERFAMILY SSF51658 29 209 3.58E-11 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily AL543_05200 4306abb7acc4b826a13b6d5887a71322 73 Pfam PF09905 DNA-binding protein VF530 6 68 8.4E-35 T 11-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 AL543_05200 4306abb7acc4b826a13b6d5887a71322 73 Gene3D G3DSA:1.10.720.30 14 72 3.5E-30 T 11-10-2018 IPR036361 SAP domain superfamily AL543_19745 f4e2bc2ef6a502e7fc56e2bc2b1cdcab 936 SUPERFAMILY SSF52518 122 532 2.43E-87 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AL543_19745 f4e2bc2ef6a502e7fc56e2bc2b1cdcab 936 Gene3D G3DSA:3.40.50.970 168 534 9.6E-146 T 11-10-2018 AL543_19745 f4e2bc2ef6a502e7fc56e2bc2b1cdcab 936 SUPERFAMILY SSF52518 577 794 2.44E-53 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AL543_19745 f4e2bc2ef6a502e7fc56e2bc2b1cdcab 936 PIRSF PIRSF000157 1 935 0.0 T 11-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AL543_19745 f4e2bc2ef6a502e7fc56e2bc2b1cdcab 936 Gene3D G3DSA:3.40.50.11610 724 930 4.8E-173 T 11-10-2018 AL543_19745 f4e2bc2ef6a502e7fc56e2bc2b1cdcab 936 Pfam PF02779 Transketolase, pyrimidine binding domain 593 788 4.1E-66 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL543_19745 f4e2bc2ef6a502e7fc56e2bc2b1cdcab 936 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 50 1.0E-13 T 11-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AL543_19745 f4e2bc2ef6a502e7fc56e2bc2b1cdcab 936 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 15 933 0.0 T 11-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AL543_19745 f4e2bc2ef6a502e7fc56e2bc2b1cdcab 936 Gene3D G3DSA:3.40.50.12470 557 803 4.8E-173 T 11-10-2018 AL543_19745 f4e2bc2ef6a502e7fc56e2bc2b1cdcab 936 Pfam PF00676 Dehydrogenase E1 component 223 517 6.7E-49 T 11-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 AL543_19745 f4e2bc2ef6a502e7fc56e2bc2b1cdcab 936 SMART SM00861 594 787 3.0E-63 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL543_19745 f4e2bc2ef6a502e7fc56e2bc2b1cdcab 936 Gene3D G3DSA:1.10.287.1150 85 167 2.0E-30 T 11-10-2018 AL543_19745 f4e2bc2ef6a502e7fc56e2bc2b1cdcab 936 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 791 933 1.0E-53 T 11-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AL543_04590 9164bef9129419f1cc749116fe8674ed 298 SMART SM01130 3 294 1.3E-68 T 11-10-2018 IPR002220 DapA-like GO:0016829 AL543_04590 9164bef9129419f1cc749116fe8674ed 298 Gene3D G3DSA:3.20.20.70 1 297 9.5E-102 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_04590 9164bef9129419f1cc749116fe8674ed 298 PIRSF PIRSF001365 1 297 4.5E-72 T 11-10-2018 IPR002220 DapA-like GO:0016829 AL543_04590 9164bef9129419f1cc749116fe8674ed 298 Pfam PF00701 Dihydrodipicolinate synthetase family 4 288 6.1E-51 T 11-10-2018 IPR002220 DapA-like GO:0016829 AL543_04590 9164bef9129419f1cc749116fe8674ed 298 SUPERFAMILY SSF51569 1 296 6.8E-74 T 11-10-2018 AL543_04590 9164bef9129419f1cc749116fe8674ed 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 2.5E-6 T 11-10-2018 IPR002220 DapA-like GO:0016829 AL543_04590 9164bef9129419f1cc749116fe8674ed 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 2.5E-6 T 11-10-2018 IPR002220 DapA-like GO:0016829 AL543_18470 75aef319db79442749683fe7da62cfeb 246 Pfam PF04055 Radical SAM superfamily 24 178 9.5E-32 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL543_18470 75aef319db79442749683fe7da62cfeb 246 Gene3D G3DSA:3.20.20.70 2 246 4.8E-106 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_18470 75aef319db79442749683fe7da62cfeb 246 PIRSF PIRSF000371 44 245 8.7E-47 T 11-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 AL543_18470 75aef319db79442749683fe7da62cfeb 246 PIRSF PIRSF000371 1 48 4.0E-11 T 11-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 AL543_18470 75aef319db79442749683fe7da62cfeb 246 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 6 239 1.0E-109 T 11-10-2018 IPR012838 Pyruvate formate-lyase 1 activating enzyme GO:0043365|GO:0055114 AL543_18470 75aef319db79442749683fe7da62cfeb 246 Pfam PF13353 4Fe-4S single cluster domain 16 137 2.2E-20 T 11-10-2018 AL543_18470 75aef319db79442749683fe7da62cfeb 246 SUPERFAMILY SSF102114 23 220 2.49E-30 T 11-10-2018 AL543_18470 75aef319db79442749683fe7da62cfeb 246 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 11-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 AL543_15155 6d7d10968f205e63ae1678af51647cf2 418 Gene3D G3DSA:1.10.3860.10 4 417 5.5E-116 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AL543_15155 6d7d10968f205e63ae1678af51647cf2 418 Pfam PF00375 Sodium:dicarboxylate symporter family 15 403 1.0E-116 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL543_15155 6d7d10968f205e63ae1678af51647cf2 418 PRINTS PR00173 Glutamate-aspartate symporter signature 78 103 1.1E-44 T 11-10-2018 AL543_15155 6d7d10968f205e63ae1678af51647cf2 418 PRINTS PR00173 Glutamate-aspartate symporter signature 297 323 1.1E-44 T 11-10-2018 AL543_15155 6d7d10968f205e63ae1678af51647cf2 418 PRINTS PR00173 Glutamate-aspartate symporter signature 147 169 1.1E-44 T 11-10-2018 AL543_15155 6d7d10968f205e63ae1678af51647cf2 418 PRINTS PR00173 Glutamate-aspartate symporter signature 358 378 1.1E-44 T 11-10-2018 AL543_15155 6d7d10968f205e63ae1678af51647cf2 418 PRINTS PR00173 Glutamate-aspartate symporter signature 230 249 1.1E-44 T 11-10-2018 AL543_15155 6d7d10968f205e63ae1678af51647cf2 418 PRINTS PR00173 Glutamate-aspartate symporter signature 332 351 1.1E-44 T 11-10-2018 AL543_15155 6d7d10968f205e63ae1678af51647cf2 418 PRINTS PR00173 Glutamate-aspartate symporter signature 11 31 1.1E-44 T 11-10-2018 AL543_15155 6d7d10968f205e63ae1678af51647cf2 418 PRINTS PR00173 Glutamate-aspartate symporter signature 195 214 1.1E-44 T 11-10-2018 AL543_15155 6d7d10968f205e63ae1678af51647cf2 418 SUPERFAMILY SSF118215 15 403 1.31E-108 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AL543_12430 224d4838e334e98ebc97d9ef5a93e2b8 239 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 9 239 52.424 T 11-10-2018 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 AL543_12430 224d4838e334e98ebc97d9ef5a93e2b8 239 Gene3D G3DSA:3.40.50.150 8 236 5.2E-57 T 11-10-2018 AL543_12430 224d4838e334e98ebc97d9ef5a93e2b8 239 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 114 120 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AL543_12430 224d4838e334e98ebc97d9ef5a93e2b8 239 Pfam PF05175 Methyltransferase small domain 45 133 2.9E-15 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 AL543_12430 224d4838e334e98ebc97d9ef5a93e2b8 239 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 111 123 2.4E-5 T 11-10-2018 AL543_12430 224d4838e334e98ebc97d9ef5a93e2b8 239 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 46 60 2.4E-5 T 11-10-2018 AL543_12430 224d4838e334e98ebc97d9ef5a93e2b8 239 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 141 165 2.4E-5 T 11-10-2018 AL543_12430 224d4838e334e98ebc97d9ef5a93e2b8 239 SUPERFAMILY SSF53335 16 183 2.5E-30 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL543_17225 7803f0bbc219359377e44bd1a348d393 386 Pfam PF00288 GHMP kinases N terminal domain 115 182 1.4E-11 T 11-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 AL543_17225 7803f0bbc219359377e44bd1a348d393 386 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 122 133 - T 11-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 AL543_17225 7803f0bbc219359377e44bd1a348d393 386 Gene3D G3DSA:3.30.70.890 203 358 6.6E-134 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily AL543_17225 7803f0bbc219359377e44bd1a348d393 386 Gene3D G3DSA:3.30.230.10 23 202 6.6E-134 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL543_17225 7803f0bbc219359377e44bd1a348d393 386 Hamap MF_00246 Galactokinase [galK]. 26 382 44.147 T 11-10-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AL543_17225 7803f0bbc219359377e44bd1a348d393 386 PRINTS PR00959 Mevalonate kinase family signature 26 50 5.4E-44 T 11-10-2018 AL543_17225 7803f0bbc219359377e44bd1a348d393 386 PRINTS PR00959 Mevalonate kinase family signature 120 142 5.4E-44 T 11-10-2018 AL543_17225 7803f0bbc219359377e44bd1a348d393 386 PRINTS PR00959 Mevalonate kinase family signature 163 182 5.4E-44 T 11-10-2018 AL543_17225 7803f0bbc219359377e44bd1a348d393 386 PRINTS PR00959 Mevalonate kinase family signature 329 346 5.4E-44 T 11-10-2018 AL543_17225 7803f0bbc219359377e44bd1a348d393 386 PRINTS PR00473 Galactokinase signature 264 278 6.1E-30 T 11-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AL543_17225 7803f0bbc219359377e44bd1a348d393 386 PRINTS PR00473 Galactokinase signature 93 104 6.1E-30 T 11-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AL543_17225 7803f0bbc219359377e44bd1a348d393 386 PRINTS PR00473 Galactokinase signature 28 46 6.1E-30 T 11-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AL543_17225 7803f0bbc219359377e44bd1a348d393 386 PRINTS PR00473 Galactokinase signature 113 131 6.1E-30 T 11-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AL543_17225 7803f0bbc219359377e44bd1a348d393 386 Pfam PF10509 Galactokinase galactose-binding signature 12 59 7.2E-21 T 11-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AL543_17225 7803f0bbc219359377e44bd1a348d393 386 ProSitePatterns PS00106 Galactokinase signature. 28 39 - T 11-10-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AL543_17225 7803f0bbc219359377e44bd1a348d393 386 SUPERFAMILY SSF54211 2 203 2.5E-64 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL543_17225 7803f0bbc219359377e44bd1a348d393 386 Pfam PF08544 GHMP kinases C terminal 280 361 1.2E-11 T 11-10-2018 IPR013750 GHMP kinase, C-terminal domain AL543_17225 7803f0bbc219359377e44bd1a348d393 386 SUPERFAMILY SSF55060 206 382 2.4E-52 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily AL543_17225 7803f0bbc219359377e44bd1a348d393 386 TIGRFAM TIGR00131 gal_kin: galactokinase 6 381 5.0E-147 T 11-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AL543_17225 7803f0bbc219359377e44bd1a348d393 386 PIRSF PIRSF000530 1 384 3.8E-125 T 11-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AL543_04880 81c67b26c83f6e82b34a2ade968e476e 126 Gene3D G3DSA:3.10.180.10 5 126 1.4E-13 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL543_04880 81c67b26c83f6e82b34a2ade968e476e 126 Pfam PF12681 Glyoxalase-like domain 5 120 2.3E-7 T 11-10-2018 IPR025870 Glyoxalase-like domain AL543_04880 81c67b26c83f6e82b34a2ade968e476e 126 SUPERFAMILY SSF54593 3 124 3.3E-16 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL543_05560 81c67b26c83f6e82b34a2ade968e476e 126 Gene3D G3DSA:3.10.180.10 5 126 1.4E-13 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL543_05560 81c67b26c83f6e82b34a2ade968e476e 126 Pfam PF12681 Glyoxalase-like domain 5 120 2.3E-7 T 11-10-2018 IPR025870 Glyoxalase-like domain AL543_05560 81c67b26c83f6e82b34a2ade968e476e 126 SUPERFAMILY SSF54593 3 124 3.3E-16 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL543_19825 f0980245a507b51b9bf5f4d8c85017d7 166 Pfam PF14539 Domain of unknown function (DUF4442) 14 151 8.1E-25 T 11-10-2018 IPR027961 Protein of unknown function DUF4442 AL543_19825 f0980245a507b51b9bf5f4d8c85017d7 166 Gene3D G3DSA:3.10.129.10 12 157 8.5E-28 T 11-10-2018 AL543_19825 f0980245a507b51b9bf5f4d8c85017d7 166 SUPERFAMILY SSF54637 11 156 6.45E-24 T 11-10-2018 IPR029069 HotDog domain superfamily AL543_20100 639a143690926e08baae477217e955ff 116 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 3 116 2.6E-44 T 11-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 AL543_20100 639a143690926e08baae477217e955ff 116 Gene3D G3DSA:3.40.30.10 1 116 1.2E-47 T 11-10-2018 AL543_20100 639a143690926e08baae477217e955ff 116 Pfam PF03960 ArsC family 6 115 2.7E-20 T 11-10-2018 IPR006660 Arsenate reductase-like AL543_20100 639a143690926e08baae477217e955ff 116 SUPERFAMILY SSF52833 2 116 5.51E-34 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL543_07570 f53f65e5247836ff0fecaae2ac623448 211 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 9 202 1.4E-57 T 11-10-2018 IPR004507 Flavin prenyltransferase UbiX-like AL543_07570 f53f65e5247836ff0fecaae2ac623448 211 Pfam PF02441 Flavoprotein 8 183 1.2E-24 T 11-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AL543_07570 f53f65e5247836ff0fecaae2ac623448 211 Gene3D G3DSA:3.40.50.1950 1 205 4.2E-78 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 AL543_07570 f53f65e5247836ff0fecaae2ac623448 211 SUPERFAMILY SSF52507 7 203 1.44E-57 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 AL543_07570 f53f65e5247836ff0fecaae2ac623448 211 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 7 204 35.337 T 11-10-2018 IPR004507 Flavin prenyltransferase UbiX-like AL543_20015 1960af899320bd9cfbd3223f933a886f 378 Pfam PF00700 Bacterial flagellin C-terminal helical region 291 376 2.3E-24 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL543_20015 1960af899320bd9cfbd3223f933a886f 378 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 8.4E-42 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL543_20015 1960af899320bd9cfbd3223f933a886f 378 Gene3D G3DSA:3.30.70.2120 172 275 1.5E-75 T 11-10-2018 AL543_20015 1960af899320bd9cfbd3223f933a886f 378 PRINTS PR00207 Flagellin signature 76 95 6.4E-25 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL543_20015 1960af899320bd9cfbd3223f933a886f 378 PRINTS PR00207 Flagellin signature 37 54 6.4E-25 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL543_20015 1960af899320bd9cfbd3223f933a886f 378 PRINTS PR00207 Flagellin signature 111 134 6.4E-25 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL543_20015 1960af899320bd9cfbd3223f933a886f 378 SUPERFAMILY SSF64518 1 377 1.83E-93 T 11-10-2018 AL543_20015 1960af899320bd9cfbd3223f933a886f 378 Pfam PF07196 Flagellin hook IN motif 197 245 1.1E-8 T 11-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 AL543_20015 1960af899320bd9cfbd3223f933a886f 378 Gene3D G3DSA:1.10.8.410 328 377 1.9E-19 T 11-10-2018 AL543_20015 1960af899320bd9cfbd3223f933a886f 378 Gene3D G3DSA:1.20.1330.10 44 327 1.5E-75 T 11-10-2018 AL543_00420 7b964c8e800c829909f7698baca524eb 176 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 14 105 1.7E-17 T 11-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AL543_00420 7b964c8e800c829909f7698baca524eb 176 SUPERFAMILY SSF50475 12 162 2.62E-34 T 11-10-2018 AL543_00420 7b964c8e800c829909f7698baca524eb 176 Gene3D G3DSA:2.30.110.10 11 175 5.9E-55 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AL543_00420 7b964c8e800c829909f7698baca524eb 176 TIGRFAM TIGR04110 heme_HutZ: heme utilization protein HutZ 4 171 7.5E-90 T 11-10-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain AL543_00420 7b964c8e800c829909f7698baca524eb 176 PIRSF PIRSF004633 1 176 9.2E-80 T 11-10-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain AL543_12615 606e0f51ee6f2dfc334f7acc45527e7f 555 Pfam PF12848 ABC transporter 230 306 3.2E-13 T 11-10-2018 IPR032781 ABC-transporter extension domain AL543_12615 606e0f51ee6f2dfc334f7acc45527e7f 555 SUPERFAMILY SSF52540 302 527 1.14E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_12615 606e0f51ee6f2dfc334f7acc45527e7f 555 Gene3D G3DSA:3.40.50.300 1 285 1.3E-86 T 11-10-2018 AL543_12615 606e0f51ee6f2dfc334f7acc45527e7f 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_12615 606e0f51ee6f2dfc334f7acc45527e7f 555 Pfam PF00005 ABC transporter 340 473 1.6E-25 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_12615 606e0f51ee6f2dfc334f7acc45527e7f 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 3 553 1.2E-293 T 11-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 AL543_12615 606e0f51ee6f2dfc334f7acc45527e7f 555 SMART SM00382 348 522 4.2E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_12615 606e0f51ee6f2dfc334f7acc45527e7f 555 SMART SM00382 31 236 1.7E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_12615 606e0f51ee6f2dfc334f7acc45527e7f 555 Pfam PF00005 ABC transporter 22 191 3.9E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_12615 606e0f51ee6f2dfc334f7acc45527e7f 555 SUPERFAMILY SSF52540 9 243 4.59E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_12615 606e0f51ee6f2dfc334f7acc45527e7f 555 Gene3D G3DSA:3.40.50.300 286 555 3.5E-78 T 11-10-2018 AL543_02670 268fae7c48f87e92b637deb803b26edc 195 Gene3D G3DSA:1.10.530.40 46 194 7.5E-34 T 11-10-2018 AL543_02670 268fae7c48f87e92b637deb803b26edc 195 Pfam PF00959 Phage lysozyme 74 184 1.5E-16 T 11-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 AL543_02670 268fae7c48f87e92b637deb803b26edc 195 SUPERFAMILY SSF53955 36 193 1.79E-44 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AL543_02020 1841646f8be7e2612243c4ca2a1b65e5 238 Gene3D G3DSA:3.90.79.10 3 158 5.2E-22 T 11-10-2018 AL543_02020 1841646f8be7e2612243c4ca2a1b65e5 238 SUPERFAMILY SSF55811 2 156 7.03E-14 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AL543_01635 13bc3c2e43144f1b4c82e020f2bb9bb8 433 Pfam PF04225 Opacity-associated protein A LysM-like domain 78 158 2.4E-7 T 11-10-2018 IPR007340 Opacity-associated protein A AL543_01635 13bc3c2e43144f1b4c82e020f2bb9bb8 433 SUPERFAMILY SSF51261 148 394 3.66E-68 T 11-10-2018 IPR011055 Duplicated hybrid motif AL543_01635 13bc3c2e43144f1b4c82e020f2bb9bb8 433 Gene3D G3DSA:3.10.450.350 72 163 1.4E-32 T 11-10-2018 AL543_01635 13bc3c2e43144f1b4c82e020f2bb9bb8 433 Gene3D G3DSA:2.70.70.10 269 399 1.3E-49 T 11-10-2018 IPR011055 Duplicated hybrid motif AL543_01635 13bc3c2e43144f1b4c82e020f2bb9bb8 433 Pfam PF01551 Peptidase family M23 299 392 2.3E-32 T 11-10-2018 IPR016047 Peptidase M23 AL543_01635 13bc3c2e43144f1b4c82e020f2bb9bb8 433 Gene3D G3DSA:3.10.450.350 164 268 6.0E-34 T 11-10-2018 AL543_13410 aa8e0bae661bfd657011c439624f24dc 294 Gene3D G3DSA:3.40.50.10330 23 289 1.3E-91 T 11-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 AL543_13410 aa8e0bae661bfd657011c439624f24dc 294 Pfam PF01513 ATP-NAD kinase 8 273 4.6E-70 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AL543_13410 aa8e0bae661bfd657011c439624f24dc 294 SUPERFAMILY SSF111331 8 290 1.57E-91 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily AL543_13410 aa8e0bae661bfd657011c439624f24dc 294 Hamap MF_00361 NAD kinase [nadK]. 6 289 33.3 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AL543_13410 aa8e0bae661bfd657011c439624f24dc 294 Gene3D G3DSA:2.60.200.30 129 266 1.3E-91 T 11-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AL543_17650 15a96a58da76e7dbdf58fabd6dd3d425 484 SUPERFAMILY SSF56024 273 471 7.63E-46 T 11-10-2018 AL543_17650 15a96a58da76e7dbdf58fabd6dd3d425 484 Gene3D G3DSA:3.30.870.10 314 457 1.7E-22 T 11-10-2018 AL543_17650 15a96a58da76e7dbdf58fabd6dd3d425 484 Pfam PF13396 Phospholipase_D-nuclease N-terminal 22 59 2.8E-7 T 11-10-2018 IPR027379 Cardiolipin synthase N-terminal AL543_17650 15a96a58da76e7dbdf58fabd6dd3d425 484 Pfam PF13091 PLD-like domain 327 444 3.6E-24 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AL543_17650 15a96a58da76e7dbdf58fabd6dd3d425 484 Pfam PF13091 PLD-like domain 135 268 1.1E-15 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AL543_17650 15a96a58da76e7dbdf58fabd6dd3d425 484 SUPERFAMILY SSF56024 69 313 4.04E-49 T 11-10-2018 AL543_17650 15a96a58da76e7dbdf58fabd6dd3d425 484 SMART SM00155 219 246 3.7E-6 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AL543_17650 15a96a58da76e7dbdf58fabd6dd3d425 484 SMART SM00155 397 424 1.8E-5 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AL543_17650 15a96a58da76e7dbdf58fabd6dd3d425 484 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 484 50.55 T 11-10-2018 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 AL543_17650 15a96a58da76e7dbdf58fabd6dd3d425 484 PIRSF PIRSF000850 387 470 0.91 T 11-10-2018 AL543_17650 15a96a58da76e7dbdf58fabd6dd3d425 484 PIRSF PIRSF000850 292 376 0.0011 T 11-10-2018 AL543_17650 15a96a58da76e7dbdf58fabd6dd3d425 484 PIRSF PIRSF000850 101 251 3.3 T 11-10-2018 AL543_17650 15a96a58da76e7dbdf58fabd6dd3d425 484 Gene3D G3DSA:3.30.870.10 117 311 9.9E-36 T 11-10-2018 AL543_17650 15a96a58da76e7dbdf58fabd6dd3d425 484 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 8 484 1.8E-152 T 11-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 AL543_08060 908d4db4d93a4a405596bedffe3839e8 458 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 1.4E-67 T 11-10-2018 AL543_08060 908d4db4d93a4a405596bedffe3839e8 458 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 1.4E-67 T 11-10-2018 AL543_08060 908d4db4d93a4a405596bedffe3839e8 458 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 1.4E-67 T 11-10-2018 AL543_08060 908d4db4d93a4a405596bedffe3839e8 458 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 1.4E-67 T 11-10-2018 AL543_08060 908d4db4d93a4a405596bedffe3839e8 458 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 1.4E-67 T 11-10-2018 AL543_08060 908d4db4d93a4a405596bedffe3839e8 458 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 1.4E-67 T 11-10-2018 AL543_08060 908d4db4d93a4a405596bedffe3839e8 458 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 40.213 T 11-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL543_08060 908d4db4d93a4a405596bedffe3839e8 458 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AL543_08060 908d4db4d93a4a405596bedffe3839e8 458 Pfam PF00206 Lyase 6 301 3.5E-93 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal AL543_08060 908d4db4d93a4a405596bedffe3839e8 458 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 2.2E-28 T 11-10-2018 IPR000362 Fumarate lyase family AL543_08060 908d4db4d93a4a405596bedffe3839e8 458 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 2.2E-28 T 11-10-2018 IPR000362 Fumarate lyase family AL543_08060 908d4db4d93a4a405596bedffe3839e8 458 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 2.2E-28 T 11-10-2018 IPR000362 Fumarate lyase family AL543_08060 908d4db4d93a4a405596bedffe3839e8 458 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 2.2E-28 T 11-10-2018 IPR000362 Fumarate lyase family AL543_08060 908d4db4d93a4a405596bedffe3839e8 458 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 456 1.1E-202 T 11-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL543_08060 908d4db4d93a4a405596bedffe3839e8 458 SUPERFAMILY SSF48557 3 455 5.03E-141 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 AL543_08060 908d4db4d93a4a405596bedffe3839e8 458 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 1.1E-24 T 11-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL543_08060 908d4db4d93a4a405596bedffe3839e8 458 Gene3D G3DSA:1.10.275.10 1 107 6.6E-37 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal AL543_08060 908d4db4d93a4a405596bedffe3839e8 458 Gene3D G3DSA:1.20.200.10 108 446 3.4E-147 T 11-10-2018 AL543_08060 908d4db4d93a4a405596bedffe3839e8 458 Gene3D G3DSA:1.10.40.30 363 433 3.4E-147 T 11-10-2018 AL543_09945 cda25d68a1452e73dfe3970d16fde04a 413 Pfam PF07804 HipA-like C-terminal domain 178 388 1.3E-47 T 11-10-2018 IPR012893 HipA-like, C-terminal AL543_09945 cda25d68a1452e73dfe3970d16fde04a 413 Pfam PF13657 HipA N-terminal domain 17 90 1.1E-5 T 11-10-2018 IPR017508 HipA, N-terminal subdomain 1 AL543_11630 04d41112b121eebd5b51e452378afa8e 387 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 6 383 38.561 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_11630 04d41112b121eebd5b51e452378afa8e 387 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 11-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_11630 04d41112b121eebd5b51e452378afa8e 387 SUPERFAMILY SSF53748 4 382 3.18E-143 T 11-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_11630 04d41112b121eebd5b51e452378afa8e 387 Pfam PF00162 Phosphoglycerate kinase 8 373 1.2E-138 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_11630 04d41112b121eebd5b51e452378afa8e 387 PIRSF PIRSF000724 1 387 9.9E-135 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_11630 04d41112b121eebd5b51e452378afa8e 387 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 3.8E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_11630 04d41112b121eebd5b51e452378afa8e 387 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 3.8E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_11630 04d41112b121eebd5b51e452378afa8e 387 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 3.8E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_11630 04d41112b121eebd5b51e452378afa8e 387 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 3.8E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_11630 04d41112b121eebd5b51e452378afa8e 387 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 3.8E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_11630 04d41112b121eebd5b51e452378afa8e 387 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 3.8E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_11630 04d41112b121eebd5b51e452378afa8e 387 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 3.8E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_11630 04d41112b121eebd5b51e452378afa8e 387 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 3.8E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_11630 04d41112b121eebd5b51e452378afa8e 387 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 3.8E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_11630 04d41112b121eebd5b51e452378afa8e 387 Gene3D G3DSA:3.40.50.1260 10 379 2.2E-152 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_11630 04d41112b121eebd5b51e452378afa8e 387 Gene3D G3DSA:3.40.50.1260 165 373 2.2E-152 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_05755 90e43b4283261e85957d767d1872c3bd 696 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 531 692 4.4E-39 T 11-10-2018 IPR000160 GGDEF domain AL543_05755 90e43b4283261e85957d767d1872c3bd 696 Gene3D G3DSA:3.30.70.270 519 692 1.6E-46 T 11-10-2018 AL543_05755 90e43b4283261e85957d767d1872c3bd 696 SUPERFAMILY SSF55073 539 694 8.63E-40 T 11-10-2018 IPR029787 Nucleotide cyclase AL543_05755 90e43b4283261e85957d767d1872c3bd 696 Pfam PF00990 Diguanylate cyclase, GGDEF domain 534 688 7.0E-38 T 11-10-2018 IPR000160 GGDEF domain AL543_05755 90e43b4283261e85957d767d1872c3bd 696 SUPERFAMILY SSF55781 200 343 6.98E-5 T 11-10-2018 AL543_05755 90e43b4283261e85957d767d1872c3bd 696 SMART SM00267 523 693 7.0E-48 T 11-10-2018 IPR000160 GGDEF domain AL543_05755 90e43b4283261e85957d767d1872c3bd 696 Gene3D G3DSA:3.30.450.40 336 508 1.3E-5 T 11-10-2018 IPR029016 GAF-like domain superfamily AL543_05755 90e43b4283261e85957d767d1872c3bd 696 SUPERFAMILY SSF55781 362 509 1.31E-7 T 11-10-2018 AL543_15035 19945741b7ab4947aad25a1852c7a832 87 SUPERFAMILY SSF52833 3 82 1.54E-21 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL543_15035 19945741b7ab4947aad25a1852c7a832 87 PRINTS PR00160 Glutaredoxin signature 66 79 2.6E-11 T 11-10-2018 IPR014025 Glutaredoxin subgroup AL543_15035 19945741b7ab4947aad25a1852c7a832 87 PRINTS PR00160 Glutaredoxin signature 52 65 2.6E-11 T 11-10-2018 IPR014025 Glutaredoxin subgroup AL543_15035 19945741b7ab4947aad25a1852c7a832 87 PRINTS PR00160 Glutaredoxin signature 3 21 2.6E-11 T 11-10-2018 IPR014025 Glutaredoxin subgroup AL543_15035 19945741b7ab4947aad25a1852c7a832 87 Gene3D G3DSA:3.40.30.10 1 85 1.2E-25 T 11-10-2018 AL543_15035 19945741b7ab4947aad25a1852c7a832 87 Pfam PF00462 Glutaredoxin 3 69 1.6E-16 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AL543_15035 19945741b7ab4947aad25a1852c7a832 87 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 85 2.7E-49 T 11-10-2018 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 AL543_19360 5bbe971700e39b5b6d80f22b18e06227 338 Pfam PF02618 YceG-like family 43 328 3.9E-84 T 11-10-2018 IPR003770 Endolytic murein transglycosylase AL543_19360 5bbe971700e39b5b6d80f22b18e06227 338 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 5 336 2.7E-97 T 11-10-2018 IPR003770 Endolytic murein transglycosylase AL543_19360 5bbe971700e39b5b6d80f22b18e06227 338 Gene3D G3DSA:3.30.160.60 74 110 2.4E-12 T 11-10-2018 AL543_19360 5bbe971700e39b5b6d80f22b18e06227 338 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 5 333 33.41 T 11-10-2018 IPR003770 Endolytic murein transglycosylase AL543_19360 5bbe971700e39b5b6d80f22b18e06227 338 Gene3D G3DSA:3.30.160.60 302 338 6.0E-19 T 11-10-2018 AL543_14095 bc374e680342416f179b8ea1620bd3ee 404 Gene3D G3DSA:3.30.420.40 207 376 1.8E-94 T 11-10-2018 AL543_14095 bc374e680342416f179b8ea1620bd3ee 404 Gene3D G3DSA:1.10.10.10 3 79 3.9E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_14095 bc374e680342416f179b8ea1620bd3ee 404 SUPERFAMILY SSF53067 85 391 4.54E-55 T 11-10-2018 AL543_14095 bc374e680342416f179b8ea1620bd3ee 404 ProSitePatterns PS01125 ROK family signature. 217 244 - T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AL543_14095 bc374e680342416f179b8ea1620bd3ee 404 Gene3D G3DSA:3.30.420.40 90 384 1.8E-94 T 11-10-2018 AL543_14095 bc374e680342416f179b8ea1620bd3ee 404 SUPERFAMILY SSF46785 11 75 6.18E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_14095 bc374e680342416f179b8ea1620bd3ee 404 Pfam PF00480 ROK family 86 390 1.9E-74 T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AL543_21670 07d7eddd7c9ea7b9217b43ee8355f5d5 47 Pfam PF04927 Seed maturation protein 6 45 3.5E-6 T 11-10-2018 IPR007011 Late embryogenesis abundant protein, SMP subgroup AL543_21670 07d7eddd7c9ea7b9217b43ee8355f5d5 47 Gene3D G3DSA:1.10.246.160 3 46 1.6E-5 T 11-10-2018 IPR038213 IFI6/IFI27-like domain superfamily AL543_19635 f51c120f233c0f05b8c00fff485ef42f 777 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 495 634 2.3E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_19635 f51c120f233c0f05b8c00fff485ef42f 777 Gene3D G3DSA:1.10.287.560 387 447 2.0E-19 T 11-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 AL543_19635 f51c120f233c0f05b8c00fff485ef42f 777 SUPERFAMILY SSF50341 634 768 1.23E-28 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AL543_19635 f51c120f233c0f05b8c00fff485ef42f 777 Gene3D G3DSA:2.30.30.40 635 764 5.4E-35 T 11-10-2018 AL543_19635 f51c120f233c0f05b8c00fff485ef42f 777 Pfam PF01584 CheW-like domain 641 770 2.5E-22 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AL543_19635 f51c120f233c0f05b8c00fff485ef42f 777 SUPERFAMILY SSF47226 6 128 4.71E-30 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AL543_19635 f51c120f233c0f05b8c00fff485ef42f 777 SMART SM01231 387 447 7.6E-18 T 11-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AL543_19635 f51c120f233c0f05b8c00fff485ef42f 777 Gene3D G3DSA:3.30.565.10 448 634 8.7E-57 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_19635 f51c120f233c0f05b8c00fff485ef42f 777 SMART SM00387 492 635 4.4E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_19635 f51c120f233c0f05b8c00fff485ef42f 777 Pfam PF01627 Hpt domain 8 100 1.7E-17 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AL543_19635 f51c120f233c0f05b8c00fff485ef42f 777 SMART SM00260 627 768 6.5E-33 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AL543_19635 f51c120f233c0f05b8c00fff485ef42f 777 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 387 447 1.0E-12 T 11-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AL543_19635 f51c120f233c0f05b8c00fff485ef42f 777 SUPERFAMILY SSF55874 450 633 1.44E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_19635 f51c120f233c0f05b8c00fff485ef42f 777 SUPERFAMILY SSF47384 388 448 4.71E-14 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL543_19635 f51c120f233c0f05b8c00fff485ef42f 777 Gene3D G3DSA:2.40.50.180 658 723 5.4E-35 T 11-10-2018 AL543_19635 f51c120f233c0f05b8c00fff485ef42f 777 PRINTS PR00344 Bacterial sensor protein C-terminal signature 537 551 1.1E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_19635 f51c120f233c0f05b8c00fff485ef42f 777 PRINTS PR00344 Bacterial sensor protein C-terminal signature 595 613 1.1E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_19635 f51c120f233c0f05b8c00fff485ef42f 777 PRINTS PR00344 Bacterial sensor protein C-terminal signature 619 632 1.1E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_19635 f51c120f233c0f05b8c00fff485ef42f 777 PRINTS PR00344 Bacterial sensor protein C-terminal signature 579 589 1.1E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_19635 f51c120f233c0f05b8c00fff485ef42f 777 Gene3D G3DSA:1.20.120.160 2 145 1.7E-36 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AL543_19635 f51c120f233c0f05b8c00fff485ef42f 777 SMART SM00073 6 103 1.1E-17 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AL543_06595 7a5dd7fb10eae8e87b89e64f05da6ff3 476 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 87 102 - T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL543_06595 7a5dd7fb10eae8e87b89e64f05da6ff3 476 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 441 1.9E-164 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL543_06595 7a5dd7fb10eae8e87b89e64f05da6ff3 476 PRINTS PR00175 Sodium/alanine symporter signature 349 371 7.1E-59 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL543_06595 7a5dd7fb10eae8e87b89e64f05da6ff3 476 PRINTS PR00175 Sodium/alanine symporter signature 178 196 7.1E-59 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL543_06595 7a5dd7fb10eae8e87b89e64f05da6ff3 476 PRINTS PR00175 Sodium/alanine symporter signature 206 225 7.1E-59 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL543_06595 7a5dd7fb10eae8e87b89e64f05da6ff3 476 PRINTS PR00175 Sodium/alanine symporter signature 303 321 7.1E-59 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL543_06595 7a5dd7fb10eae8e87b89e64f05da6ff3 476 PRINTS PR00175 Sodium/alanine symporter signature 410 430 7.1E-59 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL543_06595 7a5dd7fb10eae8e87b89e64f05da6ff3 476 PRINTS PR00175 Sodium/alanine symporter signature 87 109 7.1E-59 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL543_06595 7a5dd7fb10eae8e87b89e64f05da6ff3 476 Pfam PF01235 Sodium:alanine symporter family 48 452 1.7E-163 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL543_17700 40346f37dcfc0d551ebd63ecb986e35b 295 SUPERFAMILY SSF161098 89 276 1.13E-23 T 11-10-2018 IPR035906 MetI-like superfamily AL543_17700 40346f37dcfc0d551ebd63ecb986e35b 295 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 65 4.6E-15 T 11-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AL543_17700 40346f37dcfc0d551ebd63ecb986e35b 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 294 3.9E-22 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL543_17700 40346f37dcfc0d551ebd63ecb986e35b 295 Gene3D G3DSA:1.10.3720.10 84 291 5.1E-20 T 11-10-2018 IPR035906 MetI-like superfamily AL543_15330 26ec82dd0bbcd26757dfade040bb12fb 402 Gene3D G3DSA:2.30.40.10 8 396 4.2E-160 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AL543_15330 26ec82dd0bbcd26757dfade040bb12fb 402 Pfam PF01979 Amidohydrolase family 57 376 4.7E-16 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AL543_15330 26ec82dd0bbcd26757dfade040bb12fb 402 SUPERFAMILY SSF51556 60 356 1.75E-81 T 11-10-2018 IPR032466 Metal-dependent hydrolase AL543_15330 26ec82dd0bbcd26757dfade040bb12fb 402 TIGRFAM TIGR01224 hutI: imidazolonepropionase 24 397 1.2E-166 T 11-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL543_15330 26ec82dd0bbcd26757dfade040bb12fb 402 Hamap MF_00372 Imidazolonepropionase [hutI]. 2 399 42.043 T 11-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL543_15330 26ec82dd0bbcd26757dfade040bb12fb 402 Gene3D G3DSA:3.20.20.140 61 359 4.2E-160 T 11-10-2018 AL543_15330 26ec82dd0bbcd26757dfade040bb12fb 402 SUPERFAMILY SSF51338 1 399 2.74E-27 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AL543_18195 fc68a4e4be2c6ff964735c2a91a77882 468 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 376 460 1.7E-33 T 11-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 AL543_18195 fc68a4e4be2c6ff964735c2a91a77882 468 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 13 342 1.4E-75 T 11-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 AL543_18195 fc68a4e4be2c6ff964735c2a91a77882 468 Gene3D G3DSA:3.40.50.2300 368 468 1.5E-35 T 11-10-2018 AL543_18195 fc68a4e4be2c6ff964735c2a91a77882 468 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 377 467 1.8E-17 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL543_18195 fc68a4e4be2c6ff964735c2a91a77882 468 SUPERFAMILY SSF52794 374 467 3.31E-30 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 AL543_10980 0c91cb9ecca593412a5cb91d4dc1b514 155 Gene3D G3DSA:1.10.10.10 4 90 7.5E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_10980 0c91cb9ecca593412a5cb91d4dc1b514 155 SUPERFAMILY SSF46785 13 145 1.51E-34 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_10980 0c91cb9ecca593412a5cb91d4dc1b514 155 Gene3D G3DSA:3.30.1490.190 92 152 2.0E-16 T 11-10-2018 AL543_10980 0c91cb9ecca593412a5cb91d4dc1b514 155 Pfam PF01475 Ferric uptake regulator family 21 139 4.8E-19 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AL543_13935 63338ae1133b08bc6824c8aaee70113a 154 SUPERFAMILY SSF55486 5 149 5.37E-49 T 11-10-2018 AL543_13935 63338ae1133b08bc6824c8aaee70113a 154 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 39 144 4.9E-38 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AL543_13935 63338ae1133b08bc6824c8aaee70113a 154 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 113 123 - T 11-10-2018 IPR020549 Endoribonuclease YbeY, conserved site AL543_13935 63338ae1133b08bc6824c8aaee70113a 154 Pfam PF02130 Uncharacterized protein family UPF0054 20 142 7.9E-39 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AL543_13935 63338ae1133b08bc6824c8aaee70113a 154 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 4 147 24.498 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AL543_13935 63338ae1133b08bc6824c8aaee70113a 154 Gene3D G3DSA:3.40.390.30 1 154 4.9E-60 T 11-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 AL543_06615 f175bdf858a1651cd38b958fa2000def 284 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 71 79 - T 11-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 AL543_06615 f175bdf858a1651cd38b958fa2000def 284 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 217 233 - T 11-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 AL543_06615 f175bdf858a1651cd38b958fa2000def 284 SMART SM00518 5 281 1.3E-120 T 11-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 AL543_06615 f175bdf858a1651cd38b958fa2000def 284 Pfam PF01261 Xylose isomerase-like TIM barrel 23 241 1.2E-41 T 11-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AL543_06615 f175bdf858a1651cd38b958fa2000def 284 Gene3D G3DSA:3.20.20.150 3 284 7.6E-111 T 11-10-2018 AL543_06615 f175bdf858a1651cd38b958fa2000def 284 SUPERFAMILY SSF51658 5 280 8.77E-100 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily AL543_06615 f175bdf858a1651cd38b958fa2000def 284 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 177 184 - T 11-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 AL543_06615 f175bdf858a1651cd38b958fa2000def 284 Hamap MF_00152 Probable endonuclease 4 [nfo]. 4 281 42.3 T 11-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 AL543_06615 f175bdf858a1651cd38b958fa2000def 284 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 4 279 3.3E-106 T 11-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 AL543_14960 90b4b2744084a3d73f2009fa9d21f029 533 Pfam PF03553 Na+/H+ antiporter family 165 497 2.4E-104 T 11-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 AL543_17375 cac3dbda00064fdd1253b588ac9a64ee 387 Gene3D G3DSA:3.20.20.10 25 252 2.1E-144 T 11-10-2018 IPR029066 PLP-binding barrel AL543_17375 cac3dbda00064fdd1253b588ac9a64ee 387 TIGRFAM TIGR01047 nspC: carboxynorspermidine decarboxylase 16 380 3.1E-171 T 11-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 AL543_17375 cac3dbda00064fdd1253b588ac9a64ee 387 SUPERFAMILY SSF51419 24 251 1.36E-42 T 11-10-2018 IPR029066 PLP-binding barrel AL543_17375 cac3dbda00064fdd1253b588ac9a64ee 387 Gene3D G3DSA:2.40.37.10 17 382 2.1E-144 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AL543_17375 cac3dbda00064fdd1253b588ac9a64ee 387 SUPERFAMILY SSF50621 222 371 1.67E-23 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AL543_17375 cac3dbda00064fdd1253b588ac9a64ee 387 PIRSF PIRSF038941 6 382 2.6E-130 T 11-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 AL543_16200 bb77471f29a963049277c0af204ec491 443 Pfam PF00990 Diguanylate cyclase, GGDEF domain 272 424 5.6E-46 T 11-10-2018 IPR000160 GGDEF domain AL543_16200 bb77471f29a963049277c0af204ec491 443 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 268 425 1.3E-43 T 11-10-2018 IPR000160 GGDEF domain AL543_16200 bb77471f29a963049277c0af204ec491 443 SMART SM00267 259 431 7.9E-51 T 11-10-2018 IPR000160 GGDEF domain AL543_16200 bb77471f29a963049277c0af204ec491 443 Gene3D G3DSA:3.30.70.270 264 437 3.4E-52 T 11-10-2018 AL543_16200 bb77471f29a963049277c0af204ec491 443 SUPERFAMILY SSF55073 275 429 1.73E-46 T 11-10-2018 IPR029787 Nucleotide cyclase AL543_17820 9f6fca6d909d6d83019d3f7b62eb6f0b 132 Gene3D G3DSA:3.30.300.250 21 132 1.4E-45 T 11-10-2018 AL543_17820 9f6fca6d909d6d83019d3f7b62eb6f0b 132 Pfam PF16549 Type II secretion system (T2SS) pilotin, S protein 16 130 4.6E-46 T 11-10-2018 IPR016502 Type II secretion system (T2SS) pilotin, S protein AL543_17820 9f6fca6d909d6d83019d3f7b62eb6f0b 132 PIRSF PIRSF007010 1 132 5.4E-58 T 11-10-2018 IPR016502 Type II secretion system (T2SS) pilotin, S protein AL543_18610 3d8d9b54150ad9e10765ced23f791f2c 129 Pfam PF07233 Protein of unknown function (DUF1425) 35 125 4.3E-31 T 11-10-2018 IPR010824 Protein of unknown function DUF1425 AL543_18610 3d8d9b54150ad9e10765ced23f791f2c 129 Gene3D G3DSA:2.60.40.3230 18 128 8.8E-32 T 11-10-2018 IPR038483 YcfL-like superfamily AL543_10645 1b57427c2738695ed49df016259d88f5 375 SUPERFAMILY SSF52540 70 375 2.31E-75 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_10645 1b57427c2738695ed49df016259d88f5 375 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 150 302 8.2E-12 T 11-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 AL543_10645 1b57427c2738695ed49df016259d88f5 375 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 71 375 4.1E-144 T 11-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AL543_10645 1b57427c2738695ed49df016259d88f5 375 Gene3D G3DSA:3.40.50.300 60 375 1.3E-91 T 11-10-2018 AL543_10645 1b57427c2738695ed49df016259d88f5 375 Hamap MF_00215 Pantothenate kinase [coaA]. 1 375 209.576 T 11-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AL543_15355 774d6cda8405ec43d8a9c575b57e9f1d 255 Gene3D G3DSA:3.30.460.10 6 116 1.3E-6 T 11-10-2018 AL543_15355 774d6cda8405ec43d8a9c575b57e9f1d 255 Pfam PF01909 Nucleotidyltransferase domain 37 92 6.2E-5 T 11-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 AL543_15355 774d6cda8405ec43d8a9c575b57e9f1d 255 SUPERFAMILY SSF81301 36 104 5.09E-8 T 11-10-2018 AL543_11590 5337bc9eff48554935525aa4d5e664a6 231 SUPERFAMILY SSF54060 21 229 6.36E-92 T 11-10-2018 AL543_11590 5337bc9eff48554935525aa4d5e664a6 231 Pfam PF04231 Endonuclease I 32 227 2.7E-42 T 11-10-2018 IPR007346 Endonuclease I GO:0004518 AL543_19195 36ed9191868f90c3fb5866133abd76bc 284 SUPERFAMILY SSF53474 9 282 1.77E-45 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL543_19195 36ed9191868f90c3fb5866133abd76bc 284 Pfam PF00561 alpha/beta hydrolase fold 29 212 2.9E-19 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AL543_19195 36ed9191868f90c3fb5866133abd76bc 284 Gene3D G3DSA:3.40.50.1820 5 277 2.3E-44 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL543_19195 36ed9191868f90c3fb5866133abd76bc 284 PRINTS PR00412 Epoxide hydrolase signature 100 113 5.7E-5 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL543_19195 36ed9191868f90c3fb5866133abd76bc 284 PRINTS PR00412 Epoxide hydrolase signature 114 127 5.7E-5 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL543_19195 36ed9191868f90c3fb5866133abd76bc 284 PRINTS PR00412 Epoxide hydrolase signature 258 280 5.7E-5 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL543_19195 36ed9191868f90c3fb5866133abd76bc 284 PRINTS PR00412 Epoxide hydrolase signature 56 71 5.7E-5 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL543_19195 36ed9191868f90c3fb5866133abd76bc 284 PRINTS PR00412 Epoxide hydrolase signature 34 52 5.7E-5 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL543_13250 b1873ba9aa49db074c125bd87c041c10 139 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 58 132 1.5E-20 T 11-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 AL543_13250 b1873ba9aa49db074c125bd87c041c10 139 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 54 137 1.2E-30 T 11-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 AL543_13250 b1873ba9aa49db074c125bd87c041c10 139 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 26 139 33.873 T 11-10-2018 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3 AL543_14745 6aebe70a08875482361fa0f1a4c7328b 536 SMART SM00052 273 520 1.8E-44 T 11-10-2018 IPR001633 EAL domain AL543_14745 6aebe70a08875482361fa0f1a4c7328b 536 Gene3D G3DSA:3.40.50.2300 3 135 4.0E-28 T 11-10-2018 AL543_14745 6aebe70a08875482361fa0f1a4c7328b 536 SUPERFAMILY SSF141868 283 527 1.57E-60 T 11-10-2018 IPR035919 EAL domain superfamily AL543_14745 6aebe70a08875482361fa0f1a4c7328b 536 SMART SM00448 5 117 1.9E-16 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_14745 6aebe70a08875482361fa0f1a4c7328b 536 Pfam PF00563 EAL domain 282 514 3.4E-57 T 11-10-2018 IPR001633 EAL domain AL543_14745 6aebe70a08875482361fa0f1a4c7328b 536 Pfam PF00072 Response regulator receiver domain 7 117 1.5E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_14745 6aebe70a08875482361fa0f1a4c7328b 536 Gene3D G3DSA:3.20.20.450 278 533 1.7E-62 T 11-10-2018 IPR035919 EAL domain superfamily AL543_14745 6aebe70a08875482361fa0f1a4c7328b 536 SUPERFAMILY SSF52172 6 134 8.68E-28 T 11-10-2018 IPR011006 CheY-like superfamily AL543_20080 657ade2e8ce6427cf848488cbf821621 623 Gene3D G3DSA:3.30.450.20 62 173 4.0E-73 T 11-10-2018 AL543_20080 657ade2e8ce6427cf848488cbf821621 623 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 408 589 1.2E-43 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_20080 657ade2e8ce6427cf848488cbf821621 623 Pfam PF00672 HAMP domain 292 342 2.3E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_20080 657ade2e8ce6427cf848488cbf821621 623 SMART SM00304 292 346 2.0E-10 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_20080 657ade2e8ce6427cf848488cbf821621 623 Pfam PF02743 Cache domain 38 254 2.8E-33 T 11-10-2018 IPR033479 Double Cache domain 1 AL543_20080 657ade2e8ce6427cf848488cbf821621 623 SUPERFAMILY SSF103190 55 184 6.28E-17 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily AL543_20080 657ade2e8ce6427cf848488cbf821621 623 Gene3D G3DSA:3.30.450.20 49 266 4.0E-73 T 11-10-2018 AL543_20080 657ade2e8ce6427cf848488cbf821621 623 SUPERFAMILY SSF58104 314 621 9.68E-74 T 11-10-2018 AL543_20080 657ade2e8ce6427cf848488cbf821621 623 SMART SM00283 361 622 3.0E-75 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_20080 657ade2e8ce6427cf848488cbf821621 623 Gene3D G3DSA:1.10.287.950 292 623 3.8E-69 T 11-10-2018 AL543_20150 03ccc6dab7a78791080bf0d40bfbc546 286 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 5 280 45.975 T 11-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 AL543_20150 03ccc6dab7a78791080bf0d40bfbc546 286 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 185 191 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AL543_20150 03ccc6dab7a78791080bf0d40bfbc546 286 Gene3D G3DSA:3.40.50.150 89 281 1.8E-58 T 11-10-2018 AL543_20150 03ccc6dab7a78791080bf0d40bfbc546 286 SUPERFAMILY SSF53335 5 280 2.94E-57 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL543_20150 03ccc6dab7a78791080bf0d40bfbc546 286 Pfam PF13847 Methyltransferase domain 116 268 3.8E-15 T 11-10-2018 IPR025714 Methyltransferase domain AL543_20150 03ccc6dab7a78791080bf0d40bfbc546 286 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 4 282 1.1E-76 T 11-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 AL543_20150 03ccc6dab7a78791080bf0d40bfbc546 286 Gene3D G3DSA:1.10.8.10 3 88 1.4E-24 T 11-10-2018 AL543_20150 03ccc6dab7a78791080bf0d40bfbc546 286 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 27 276 2.9E-89 T 11-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 AL543_00475 9c3a1eb85dbd62c564e6d5224e719a19 199 Gene3D G3DSA:3.80.10.10 17 195 3.1E-9 T 11-10-2018 IPR032675 Leucine-rich repeat domain superfamily AL543_11415 6afced620846bb798d3fe7db345c7ac3 330 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 5 324 5.4E-130 T 11-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 AL543_11415 6afced620846bb798d3fe7db345c7ac3 330 SUPERFAMILY SSF53659 3 326 1.14E-113 T 11-10-2018 AL543_11415 6afced620846bb798d3fe7db345c7ac3 330 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 3 328 36.629 T 11-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 AL543_11415 6afced620846bb798d3fe7db345c7ac3 330 Gene3D G3DSA:3.40.718.10 1 330 1.6E-124 T 11-10-2018 AL543_11415 6afced620846bb798d3fe7db345c7ac3 330 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 32 321 1.4E-107 T 11-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 AL543_12200 9151ac10db53892e5bdfcdb309ccff05 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 300 2.0E-18 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL543_12200 9151ac10db53892e5bdfcdb309ccff05 341 SUPERFAMILY SSF161098 96 278 1.57E-18 T 11-10-2018 IPR035906 MetI-like superfamily AL543_12200 9151ac10db53892e5bdfcdb309ccff05 341 Gene3D G3DSA:1.10.3720.10 94 303 4.3E-15 T 11-10-2018 IPR035906 MetI-like superfamily AL543_12200 9151ac10db53892e5bdfcdb309ccff05 341 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 5 39 3.6E-6 T 11-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AL543_03130 981e97f7c73e560da9a088c813c13673 225 Gene3D G3DSA:3.40.50.300 3 224 3.0E-69 T 11-10-2018 AL543_03130 981e97f7c73e560da9a088c813c13673 225 SMART SM00382 34 220 3.0E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_03130 981e97f7c73e560da9a088c813c13673 225 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_03130 981e97f7c73e560da9a088c813c13673 225 Pfam PF00005 ABC transporter 25 171 2.0E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_03130 981e97f7c73e560da9a088c813c13673 225 SUPERFAMILY SSF52540 5 223 2.6E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_20585 405c9c989a125c59d4fa73a4f48bdd38 407 Pfam PF00589 Phage integrase family 193 382 3.2E-20 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL543_20585 405c9c989a125c59d4fa73a4f48bdd38 407 Gene3D G3DSA:1.10.443.10 183 389 1.4E-34 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AL543_20585 405c9c989a125c59d4fa73a4f48bdd38 407 Pfam PF12167 Arm DNA-binding domain 11 74 6.1E-23 T 11-10-2018 IPR022000 Min27-like integrase, DNA-binding domain AL543_20585 405c9c989a125c59d4fa73a4f48bdd38 407 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 98 165 5.6E-5 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AL543_20585 405c9c989a125c59d4fa73a4f48bdd38 407 SUPERFAMILY SSF56349 87 392 6.77E-46 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL543_20585 405c9c989a125c59d4fa73a4f48bdd38 407 Gene3D G3DSA:1.10.150.130 83 182 2.5E-12 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AL543_14420 6c49dc9b344346cea5525ae1c84155cb 353 Gene3D G3DSA:3.40.1750.20 206 270 6.2E-44 T 11-10-2018 AL543_14420 6c49dc9b344346cea5525ae1c84155cb 353 Pfam PF08496 Peptidase family S49 N-terminal 2 162 3.0E-55 T 11-10-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 AL543_14420 6c49dc9b344346cea5525ae1c84155cb 353 SUPERFAMILY SSF52096 103 303 1.81E-28 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AL543_14420 6c49dc9b344346cea5525ae1c84155cb 353 Gene3D G3DSA:3.90.226.10 109 306 6.2E-44 T 11-10-2018 AL543_14420 6c49dc9b344346cea5525ae1c84155cb 353 Pfam PF01343 Peptidase family S49 166 313 1.4E-47 T 11-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AL543_12900 1fec5328344deb1aa8071a3bfcddd1f2 437 Gene3D G3DSA:3.20.20.60 1 419 1.0E-181 T 11-10-2018 AL543_12900 1fec5328344deb1aa8071a3bfcddd1f2 437 Pfam PF00463 Isocitrate lyase family 14 257 8.6E-62 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AL543_12900 1fec5328344deb1aa8071a3bfcddd1f2 437 Pfam PF00463 Isocitrate lyase family 259 436 2.4E-52 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AL543_12900 1fec5328344deb1aa8071a3bfcddd1f2 437 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 10 257 9.5E-113 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AL543_12900 1fec5328344deb1aa8071a3bfcddd1f2 437 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 258 436 8.7E-90 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AL543_12900 1fec5328344deb1aa8071a3bfcddd1f2 437 ProSitePatterns PS00161 Isocitrate lyase signature. 195 200 - T 11-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 AL543_12900 1fec5328344deb1aa8071a3bfcddd1f2 437 PIRSF PIRSF001362 1 437 9.9E-225 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AL543_12900 1fec5328344deb1aa8071a3bfcddd1f2 437 SUPERFAMILY SSF51621 6 436 7.18E-154 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AL543_04570 1d87ad7f9ab238ad5e88078182e83555 224 Pfam PF09335 SNARE associated Golgi protein 59 173 1.2E-16 T 11-10-2018 IPR032816 SNARE associated Golgi protein AL543_09575 60f800a7e00eb6923501cc5f30be16ae 467 Gene3D G3DSA:3.30.300.180 2 114 6.4E-42 T 11-10-2018 IPR038454 DnaA, N-terminal domain superfamily AL543_09575 60f800a7e00eb6923501cc5f30be16ae 467 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 466 34.634 T 11-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AL543_09575 60f800a7e00eb6923501cc5f30be16ae 467 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 263 290 1.7E-54 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AL543_09575 60f800a7e00eb6923501cc5f30be16ae 467 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 425 444 1.7E-54 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AL543_09575 60f800a7e00eb6923501cc5f30be16ae 467 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 197 211 1.7E-54 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AL543_09575 60f800a7e00eb6923501cc5f30be16ae 467 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 229 243 1.7E-54 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AL543_09575 60f800a7e00eb6923501cc5f30be16ae 467 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 165 185 1.7E-54 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AL543_09575 60f800a7e00eb6923501cc5f30be16ae 467 ProSitePatterns PS01008 DnaA protein signature. 425 444 - T 11-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AL543_09575 60f800a7e00eb6923501cc5f30be16ae 467 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 376 444 1.8E-32 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AL543_09575 60f800a7e00eb6923501cc5f30be16ae 467 Pfam PF00308 Bacterial dnaA protein 133 349 2.6E-98 T 11-10-2018 IPR013317 Chromosomal replication initiator protein DnaA AL543_09575 60f800a7e00eb6923501cc5f30be16ae 467 Pfam PF11638 DnaA N-terminal domain 4 64 3.0E-19 T 11-10-2018 IPR024633 DnaA N-terminal domain AL543_09575 60f800a7e00eb6923501cc5f30be16ae 467 Gene3D G3DSA:1.10.1750.10 374 467 1.4E-39 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AL543_09575 60f800a7e00eb6923501cc5f30be16ae 467 Gene3D G3DSA:3.40.50.300 117 296 2.9E-49 T 11-10-2018 AL543_09575 60f800a7e00eb6923501cc5f30be16ae 467 SMART SM00760 375 444 3.4E-45 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AL543_09575 60f800a7e00eb6923501cc5f30be16ae 467 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 465 7.4E-187 T 11-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AL543_09575 60f800a7e00eb6923501cc5f30be16ae 467 Gene3D G3DSA:1.10.8.60 298 368 1.5E-25 T 11-10-2018 AL543_09575 60f800a7e00eb6923501cc5f30be16ae 467 SUPERFAMILY SSF52540 132 343 7.91E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_09575 60f800a7e00eb6923501cc5f30be16ae 467 SMART SM00382 164 377 4.5E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_09575 60f800a7e00eb6923501cc5f30be16ae 467 SUPERFAMILY SSF48295 363 466 3.66E-38 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AL543_06585 0e3d37248eec400fb920b94693ff0446 283 PIRSF PIRSF005902 5 278 1.1E-67 T 11-10-2018 IPR001130 TatD family GO:0016788 AL543_06585 0e3d37248eec400fb920b94693ff0446 283 Gene3D G3DSA:3.20.20.140 19 276 6.7E-80 T 11-10-2018 AL543_06585 0e3d37248eec400fb920b94693ff0446 283 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 22 30 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AL543_06585 0e3d37248eec400fb920b94693ff0446 283 SUPERFAMILY SSF51556 22 275 3.29E-73 T 11-10-2018 IPR032466 Metal-dependent hydrolase AL543_06585 0e3d37248eec400fb920b94693ff0446 283 Pfam PF01026 TatD related DNase 23 273 1.5E-66 T 11-10-2018 IPR001130 TatD family GO:0016788 AL543_08745 d10f8fc2da648e732378aa79627512a7 519 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 6 502 1.4E-194 T 11-10-2018 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 AL543_08745 d10f8fc2da648e732378aa79627512a7 519 Pfam PF12161 HsdM N-terminal domain 10 159 9.3E-17 T 11-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain AL543_08745 d10f8fc2da648e732378aa79627512a7 519 Gene3D G3DSA:3.40.50.150 194 474 4.5E-81 T 11-10-2018 AL543_08745 d10f8fc2da648e732378aa79627512a7 519 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 298 304 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AL543_08745 d10f8fc2da648e732378aa79627512a7 519 Pfam PF02384 N-6 DNA Methylase 172 480 3.2E-113 T 11-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 AL543_08745 d10f8fc2da648e732378aa79627512a7 519 Gene3D G3DSA:1.20.1260.30 2 190 1.8E-50 T 11-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily AL543_08745 d10f8fc2da648e732378aa79627512a7 519 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 295 307 4.0E-22 T 11-10-2018 AL543_08745 d10f8fc2da648e732378aa79627512a7 519 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 333 357 4.0E-22 T 11-10-2018 AL543_08745 d10f8fc2da648e732378aa79627512a7 519 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 196 212 4.0E-22 T 11-10-2018 AL543_08745 d10f8fc2da648e732378aa79627512a7 519 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 222 236 4.0E-22 T 11-10-2018 AL543_08745 d10f8fc2da648e732378aa79627512a7 519 SUPERFAMILY SSF53335 9 513 2.35E-126 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL543_14995 441ecc783ab1cce9f4cb9b51edcc9ffb 257 Gene3D G3DSA:3.20.20.70 1 257 1.3E-94 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_14995 441ecc783ab1cce9f4cb9b51edcc9ffb 257 Pfam PF00977 Histidine biosynthesis protein 5 239 4.8E-78 T 11-10-2018 IPR006062 Histidine biosynthesis GO:0000105 AL543_14995 441ecc783ab1cce9f4cb9b51edcc9ffb 257 SUPERFAMILY SSF51366 1 256 5.89E-74 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AL543_14995 441ecc783ab1cce9f4cb9b51edcc9ffb 257 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 7.5E-115 T 11-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 AL543_14995 441ecc783ab1cce9f4cb9b51edcc9ffb 257 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 44.64 T 11-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 AL543_03160 8e55f7d91ccb69247682382030586ce5 246 Gene3D G3DSA:3.20.20.370 1 246 4.4E-101 T 11-10-2018 AL543_03160 8e55f7d91ccb69247682382030586ce5 246 Pfam PF03746 LamB/YcsF family 6 245 1.5E-96 T 11-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 AL543_03160 8e55f7d91ccb69247682382030586ce5 246 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 4 246 42.358 T 11-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 AL543_03160 8e55f7d91ccb69247682382030586ce5 246 SUPERFAMILY SSF88713 5 245 1.04E-92 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AL543_03165 a643361caaf399e02a8600a23dd45ee4 338 PRINTS PR01713 Nucleotide sugar epimerase signature 294 311 9.0E-6 T 11-10-2018 AL543_03165 a643361caaf399e02a8600a23dd45ee4 338 PRINTS PR01713 Nucleotide sugar epimerase signature 230 245 9.0E-6 T 11-10-2018 AL543_03165 a643361caaf399e02a8600a23dd45ee4 338 PRINTS PR01713 Nucleotide sugar epimerase signature 255 270 9.0E-6 T 11-10-2018 AL543_03165 a643361caaf399e02a8600a23dd45ee4 338 SUPERFAMILY SSF51735 1 335 4.38E-100 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_03165 a643361caaf399e02a8600a23dd45ee4 338 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 324 2.5E-64 T 11-10-2018 IPR016040 NAD(P)-binding domain AL543_03165 a643361caaf399e02a8600a23dd45ee4 338 Gene3D G3DSA:3.90.25.10 193 328 1.1E-142 T 11-10-2018 AL543_03165 a643361caaf399e02a8600a23dd45ee4 338 Gene3D G3DSA:3.40.50.720 3 273 1.1E-142 T 11-10-2018 AL543_03165 a643361caaf399e02a8600a23dd45ee4 338 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 334 1.3E-142 T 11-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 AL543_18535 dd3e0e97ed9f0cdaa0577c1cb926440b 336 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 19 324 5.2E-115 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 AL543_18535 dd3e0e97ed9f0cdaa0577c1cb926440b 336 SUPERFAMILY SSF52540 52 199 6.28E-11 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_18535 dd3e0e97ed9f0cdaa0577c1cb926440b 336 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 24 326 6.1E-97 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 AL543_18535 dd3e0e97ed9f0cdaa0577c1cb926440b 336 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 2 329 40.731 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 AL543_08300 6bc3c118382b02a7b73e719d8edba037 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 414 1.7E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_08300 6bc3c118382b02a7b73e719d8edba037 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 400 1.7E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_08300 6bc3c118382b02a7b73e719d8edba037 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 439 1.7E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_08300 6bc3c118382b02a7b73e719d8edba037 459 SMART SM00304 191 244 2.9E-9 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_08300 6bc3c118382b02a7b73e719d8edba037 459 Pfam PF00672 HAMP domain 192 239 3.8E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_08300 6bc3c118382b02a7b73e719d8edba037 459 Pfam PF00512 His Kinase A (phospho-acceptor) domain 246 306 2.0E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_08300 6bc3c118382b02a7b73e719d8edba037 459 SUPERFAMILY SSF55874 297 459 2.49E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_08300 6bc3c118382b02a7b73e719d8edba037 459 SMART SM00387 351 459 5.8E-26 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_08300 6bc3c118382b02a7b73e719d8edba037 459 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 36 169 1.1E-56 T 11-10-2018 IPR032404 Two-component sensor protein CpxA, periplasmic domain AL543_08300 6bc3c118382b02a7b73e719d8edba037 459 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 353 459 1.9E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_08300 6bc3c118382b02a7b73e719d8edba037 459 Gene3D G3DSA:1.10.287.130 195 309 4.8E-33 T 11-10-2018 AL543_08300 6bc3c118382b02a7b73e719d8edba037 459 SUPERFAMILY SSF47384 230 307 3.34E-14 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL543_08300 6bc3c118382b02a7b73e719d8edba037 459 Gene3D G3DSA:3.30.565.10 311 459 2.1E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_08300 6bc3c118382b02a7b73e719d8edba037 459 Gene3D G3DSA:3.30.450.210 31 158 1.8E-51 T 11-10-2018 IPR038515 CpxA, periplasmic domain superfamily AL543_08300 6bc3c118382b02a7b73e719d8edba037 459 SMART SM00388 245 307 1.3E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_04595 5fb78419ae09e1bd49e57e56d76463b0 427 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 414 2.3E-119 T 11-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AL543_04595 5fb78419ae09e1bd49e57e56d76463b0 427 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 15 419 3.0E-140 T 11-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 AL543_04595 5fb78419ae09e1bd49e57e56d76463b0 427 PIRSF PIRSF006066 1 425 4.9E-139 T 11-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 AL543_14725 fc89a3d4045ba38e6040ca29d341c81b 121 Pfam PF00072 Response regulator receiver domain 7 115 2.3E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_14725 fc89a3d4045ba38e6040ca29d341c81b 121 SMART SM00448 3 115 2.1E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_14725 fc89a3d4045ba38e6040ca29d341c81b 121 Gene3D G3DSA:3.40.50.2300 1 119 1.1E-25 T 11-10-2018 AL543_14725 fc89a3d4045ba38e6040ca29d341c81b 121 SUPERFAMILY SSF52172 4 118 7.26E-27 T 11-10-2018 IPR011006 CheY-like superfamily AL543_06040 a70a386879c444c6fe348b2bbdfc93eb 611 SUPERFAMILY SSF89260 512 610 2.62E-7 T 11-10-2018 AL543_06040 a70a386879c444c6fe348b2bbdfc93eb 611 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 531 598 8.2E-14 T 11-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial AL543_06040 a70a386879c444c6fe348b2bbdfc93eb 611 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 345 361 3.7E-27 T 11-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 AL543_06040 a70a386879c444c6fe348b2bbdfc93eb 611 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 311 331 3.7E-27 T 11-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 AL543_06040 a70a386879c444c6fe348b2bbdfc93eb 611 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 428 444 3.7E-27 T 11-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 AL543_06040 a70a386879c444c6fe348b2bbdfc93eb 611 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 366 377 3.7E-27 T 11-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 AL543_06040 a70a386879c444c6fe348b2bbdfc93eb 611 Gene3D G3DSA:3.10.170.10 201 358 4.3E-60 T 11-10-2018 AL543_06040 a70a386879c444c6fe348b2bbdfc93eb 611 SUPERFAMILY SSF55486 203 502 2.01E-82 T 11-10-2018 AL543_06040 a70a386879c444c6fe348b2bbdfc93eb 611 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 210 354 2.0E-35 T 11-10-2018 IPR013856 Peptidase M4 domain GO:0004222 AL543_06040 a70a386879c444c6fe348b2bbdfc93eb 611 Gene3D G3DSA:2.60.120.380 512 611 1.5E-37 T 11-10-2018 AL543_06040 a70a386879c444c6fe348b2bbdfc93eb 611 Gene3D G3DSA:3.10.450.40 111 198 2.5E-25 T 11-10-2018 AL543_06040 a70a386879c444c6fe348b2bbdfc93eb 611 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 357 501 4.2E-34 T 11-10-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 AL543_06040 a70a386879c444c6fe348b2bbdfc93eb 611 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 53 100 1.1E-11 T 11-10-2018 IPR011096 FTP domain AL543_06040 a70a386879c444c6fe348b2bbdfc93eb 611 Pfam PF03413 Peptidase propeptide and YPEB domain 118 193 2.7E-9 T 11-10-2018 IPR025711 PepSY domain AL543_06040 a70a386879c444c6fe348b2bbdfc93eb 611 Gene3D G3DSA:3.10.450.490 23 110 1.5E-7 T 11-10-2018 AL543_06040 a70a386879c444c6fe348b2bbdfc93eb 611 Gene3D G3DSA:1.10.390.10 359 508 2.7E-48 T 11-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily AL543_02400 d027be50157b53a44ed63e676c480b5c 318 PIRSF PIRSF002849 2 318 8.2E-127 T 11-10-2018 AL543_02400 d027be50157b53a44ed63e676c480b5c 318 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 36 166 3.0E-62 T 11-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 AL543_02400 d027be50157b53a44ed63e676c480b5c 318 Gene3D G3DSA:1.10.8.300 199 315 1.8E-37 T 11-10-2018 AL543_02400 d027be50157b53a44ed63e676c480b5c 318 Gene3D G3DSA:3.40.50.300 17 183 5.2E-46 T 11-10-2018 AL543_02400 d027be50157b53a44ed63e676c480b5c 318 SUPERFAMILY SSF52540 7 290 1.49E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_00755 5a827a4eed04f14519c77811e1457896 146 Pfam PF11012 Protein of unknown function (DUF2850) 38 116 8.2E-32 T 11-10-2018 IPR021271 Protein of unknown function DUF2850 AL543_18150 3a975f0bc85a91beda42f56570ba7f19 547 Pfam PF13229 Right handed beta helix region 268 412 2.2E-6 T 11-10-2018 IPR039448 Right handed beta helix domain AL543_18150 3a975f0bc85a91beda42f56570ba7f19 547 SUPERFAMILY SSF51126 47 422 1.1E-25 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor AL543_18150 3a975f0bc85a91beda42f56570ba7f19 547 SMART SM00710 289 317 6900.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat AL543_18150 3a975f0bc85a91beda42f56570ba7f19 547 SMART SM00710 266 288 130.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat AL543_18150 3a975f0bc85a91beda42f56570ba7f19 547 SMART SM00710 170 212 1100.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat AL543_18150 3a975f0bc85a91beda42f56570ba7f19 547 SMART SM00710 221 243 700.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat AL543_18150 3a975f0bc85a91beda42f56570ba7f19 547 Gene3D G3DSA:2.160.20.10 49 488 5.0E-28 T 11-10-2018 IPR012334 Pectin lyase fold AL543_12965 63637309e2c84f2ad4ec526a85ebff1b 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 4.2E-57 T 11-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 AL543_12965 63637309e2c84f2ad4ec526a85ebff1b 107 SUPERFAMILY SSF89360 1 96 6.67E-33 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AL543_12965 63637309e2c84f2ad4ec526a85ebff1b 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 2.3E-37 T 11-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 AL543_12965 63637309e2c84f2ad4ec526a85ebff1b 107 Gene3D G3DSA:2.60.300.12 2 107 1.5E-37 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AL543_12965 63637309e2c84f2ad4ec526a85ebff1b 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 11-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 AL543_12965 63637309e2c84f2ad4ec526a85ebff1b 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 6.9E-25 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AL543_03455 8f9a11fdfc9bcbe7118fb1f250c99355 722 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 10 711 1.1E-242 T 11-10-2018 IPR010020 Integral membrane protein, YccS/YhfK AL543_03455 8f9a11fdfc9bcbe7118fb1f250c99355 722 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 10 712 0.0 T 11-10-2018 IPR010019 Integral membrane protein, YccS AL543_03455 8f9a11fdfc9bcbe7118fb1f250c99355 722 Pfam PF12805 FUSC-like inner membrane protein yccS 68 348 4.1E-112 T 11-10-2018 IPR032692 Integral membrane protein YccS, N-terminal AL543_03455 8f9a11fdfc9bcbe7118fb1f250c99355 722 Pfam PF13515 Fusaric acid resistance protein-like 405 524 4.3E-22 T 11-10-2018 AL543_00090 c7fc64ffa15ace7b9b895f1a9555d4ea 301 Gene3D G3DSA:1.10.1040.10 171 293 3.5E-39 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL543_00090 c7fc64ffa15ace7b9b895f1a9555d4ea 301 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 9 165 2.2E-37 T 11-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 AL543_00090 c7fc64ffa15ace7b9b895f1a9555d4ea 301 SUPERFAMILY SSF51735 8 167 2.15E-31 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_00090 c7fc64ffa15ace7b9b895f1a9555d4ea 301 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 11 24 - T 11-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 AL543_00090 c7fc64ffa15ace7b9b895f1a9555d4ea 301 SUPERFAMILY SSF48179 169 293 3.51E-36 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AL543_00090 c7fc64ffa15ace7b9b895f1a9555d4ea 301 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 171 290 3.1E-32 T 11-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AL543_00090 c7fc64ffa15ace7b9b895f1a9555d4ea 301 PIRSF PIRSF000103 1 294 6.2E-56 T 11-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 AL543_00090 c7fc64ffa15ace7b9b895f1a9555d4ea 301 Gene3D G3DSA:3.40.50.720 2 169 1.4E-38 T 11-10-2018 AL543_12620 2819f80a61beb7debde49bc2a4252901 648 Gene3D G3DSA:1.25.20.10 33 393 1.1E-100 T 11-10-2018 AL543_12620 2819f80a61beb7debde49bc2a4252901 648 Pfam PF01464 Transglycosylase SLT domain 488 599 1.4E-29 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 AL543_12620 2819f80a61beb7debde49bc2a4252901 648 Gene3D G3DSA:1.10.530.10 477 648 5.3E-50 T 11-10-2018 AL543_12620 2819f80a61beb7debde49bc2a4252901 648 SUPERFAMILY SSF48435 33 481 1.57E-122 T 11-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 AL543_12620 2819f80a61beb7debde49bc2a4252901 648 SUPERFAMILY SSF53955 485 643 3.64E-47 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AL543_12620 2819f80a61beb7debde49bc2a4252901 648 Gene3D G3DSA:1.10.1240.20 407 475 1.3E-19 T 11-10-2018 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily GO:0004553|GO:0042597 AL543_12620 2819f80a61beb7debde49bc2a4252901 648 Pfam PF14718 Soluble lytic murein transglycosylase L domain 411 475 3.3E-21 T 11-10-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 AL543_14590 a69a532ea38b4bd28fd442e2be1702f6 113 Pfam PF01022 Bacterial regulatory protein, arsR family 12 57 3.1E-11 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL543_14590 a69a532ea38b4bd28fd442e2be1702f6 113 SMART SM00418 5 83 5.0E-21 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL543_14590 a69a532ea38b4bd28fd442e2be1702f6 113 Gene3D G3DSA:1.10.10.10 3 88 5.2E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_14590 a69a532ea38b4bd28fd442e2be1702f6 113 SUPERFAMILY SSF46785 5 87 1.07E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_14590 a69a532ea38b4bd28fd442e2be1702f6 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 6.4E-17 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL543_14590 a69a532ea38b4bd28fd442e2be1702f6 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 27 38 6.4E-17 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL543_14590 a69a532ea38b4bd28fd442e2be1702f6 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 6.4E-17 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL543_14590 a69a532ea38b4bd28fd442e2be1702f6 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 6.4E-17 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL543_12180 8eec45ebc25925e61b8940f6868423d6 290 Gene3D G3DSA:3.30.420.40 3 113 1.1E-67 T 11-10-2018 AL543_12180 8eec45ebc25925e61b8940f6868423d6 290 SUPERFAMILY SSF53067 113 282 1.85E-43 T 11-10-2018 AL543_12180 8eec45ebc25925e61b8940f6868423d6 290 SUPERFAMILY SSF53067 1 111 7.18E-26 T 11-10-2018 AL543_12180 8eec45ebc25925e61b8940f6868423d6 290 Gene3D G3DSA:3.30.420.40 114 260 1.1E-67 T 11-10-2018 AL543_12180 8eec45ebc25925e61b8940f6868423d6 290 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 5 282 7.6E-49 T 11-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 AL543_09080 691505f5fdbe75a9ea1bfe8e0a5cce81 207 SUPERFAMILY SSF55718 22 123 3.53E-9 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily AL543_09080 691505f5fdbe75a9ea1bfe8e0a5cce81 207 Pfam PF02036 SCP-2 sterol transfer family 21 117 2.6E-19 T 11-10-2018 IPR003033 SCP2 sterol-binding domain AL543_09565 d9e264f587bbaa17130b11e8bfdcf8c9 223 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 112 1.7E-24 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 AL543_09565 d9e264f587bbaa17130b11e8bfdcf8c9 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 218 5.8E-20 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL543_09565 d9e264f587bbaa17130b11e8bfdcf8c9 223 SUPERFAMILY SSF161098 13 206 2.22E-44 T 11-10-2018 IPR035906 MetI-like superfamily AL543_09565 d9e264f587bbaa17130b11e8bfdcf8c9 223 Gene3D G3DSA:1.10.3720.10 1 222 7.3E-55 T 11-10-2018 IPR035906 MetI-like superfamily AL543_17555 010dcddeedbf5456d45c7424e80c4217 806 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 97 115 5.9E-29 T 11-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 AL543_17555 010dcddeedbf5456d45c7424e80c4217 806 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 374 388 5.9E-29 T 11-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 AL543_17555 010dcddeedbf5456d45c7424e80c4217 806 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 434 452 5.9E-29 T 11-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 AL543_17555 010dcddeedbf5456d45c7424e80c4217 806 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 458 473 5.9E-29 T 11-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 AL543_17555 010dcddeedbf5456d45c7424e80c4217 806 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 392 408 5.9E-29 T 11-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 AL543_17555 010dcddeedbf5456d45c7424e80c4217 806 Pfam PF08453 Peptidase family M9 N-terminal 31 210 4.8E-49 T 11-10-2018 IPR013661 Peptidase M9, collagenase, N-terminal domain AL543_17555 010dcddeedbf5456d45c7424e80c4217 806 Gene3D G3DSA:1.10.1740.190 303 450 7.4E-33 T 11-10-2018 AL543_17555 010dcddeedbf5456d45c7424e80c4217 806 Gene3D G3DSA:1.10.390.20 453 575 4.8E-6 T 11-10-2018 AL543_17555 010dcddeedbf5456d45c7424e80c4217 806 Gene3D G3DSA:2.60.120.380 706 804 7.3E-8 T 11-10-2018 AL543_17555 010dcddeedbf5456d45c7424e80c4217 806 Gene3D G3DSA:2.60.120.380 584 686 3.2E-11 T 11-10-2018 AL543_17555 010dcddeedbf5456d45c7424e80c4217 806 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 602 672 1.8E-5 T 11-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial AL543_17555 010dcddeedbf5456d45c7424e80c4217 806 Pfam PF01752 Collagenase 272 558 8.3E-108 T 11-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 AL543_01735 8c567e6f19d9e87807302cf3f4c40a75 209 Pfam PF01810 LysE type translocator 16 205 6.0E-28 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL543_01735 8c567e6f19d9e87807302cf3f4c40a75 209 PIRSF PIRSF006324 1 208 3.9E-53 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL543_09440 5cd898cc5d9bcb88480927d7950600f3 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 64 9.0E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_09440 5cd898cc5d9bcb88480927d7950600f3 302 Gene3D G3DSA:1.10.10.10 2 90 1.5E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_09440 5cd898cc5d9bcb88480927d7950600f3 302 SUPERFAMILY SSF46785 6 87 7.62E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_09440 5cd898cc5d9bcb88480927d7950600f3 302 Pfam PF03466 LysR substrate binding domain 90 289 1.7E-19 T 11-10-2018 IPR005119 LysR, substrate-binding AL543_09440 5cd898cc5d9bcb88480927d7950600f3 302 Gene3D G3DSA:3.40.190.290 94 279 6.1E-14 T 11-10-2018 AL543_09440 5cd898cc5d9bcb88480927d7950600f3 302 SUPERFAMILY SSF53850 90 289 7.74E-22 T 11-10-2018 AL543_07910 073caf2308f06f20d39baf97dd88494e 161 TIGRFAM TIGR02444 TIGR02444: TIGR02444 family protein 13 118 2.0E-34 T 11-10-2018 IPR012659 Conserved hypothetical protein CHP02444 AL543_07910 073caf2308f06f20d39baf97dd88494e 161 Pfam PF09523 Protein of unknown function (DUF2390) 15 115 4.3E-28 T 11-10-2018 IPR012659 Conserved hypothetical protein CHP02444 AL543_18500 15626300aa84db1705e4847b8de23a37 480 Pfam PF02378 Phosphotransferase system, EIIC 14 322 1.3E-78 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL543_18500 15626300aa84db1705e4847b8de23a37 480 Pfam PF00367 phosphotransferase system, EIIB 408 439 2.3E-12 T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL543_18500 15626300aa84db1705e4847b8de23a37 480 Gene3D G3DSA:3.30.1360.60 400 479 1.2E-25 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AL543_18500 15626300aa84db1705e4847b8de23a37 480 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 478 1.1E-224 T 11-10-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0016021|GO:1904659 AL543_18500 15626300aa84db1705e4847b8de23a37 480 SUPERFAMILY SSF55604 404 476 6.41E-20 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AL543_18500 15626300aa84db1705e4847b8de23a37 480 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 380 463 3.3E-18 T 11-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AL543_18500 15626300aa84db1705e4847b8de23a37 480 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 417 434 - T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL543_16175 5432ed0837af66c015e6a0da24f7ecb2 216 PIRSF PIRSF000370 1 216 9.9E-66 T 11-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 AL543_16175 5432ed0837af66c015e6a0da24f7ecb2 216 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 1 216 32.657 T 11-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 AL543_16175 5432ed0837af66c015e6a0da24f7ecb2 216 Pfam PF13394 4Fe-4S single cluster domain 17 119 7.3E-12 T 11-10-2018 AL543_16175 5432ed0837af66c015e6a0da24f7ecb2 216 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 2 216 4.2E-112 T 11-10-2018 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 AL543_16175 5432ed0837af66c015e6a0da24f7ecb2 216 SUPERFAMILY SSF102114 19 115 1.11E-6 T 11-10-2018 AL543_16175 5432ed0837af66c015e6a0da24f7ecb2 216 Pfam PF04055 Radical SAM superfamily 19 116 1.2E-7 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL543_16175 5432ed0837af66c015e6a0da24f7ecb2 216 Gene3D G3DSA:3.20.20.70 1 216 1.6E-50 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_04170 d60935fb17b4142e096c7744041ba8e9 611 Gene3D G3DSA:3.10.105.10 319 577 1.1E-223 T 11-10-2018 AL543_04170 d60935fb17b4142e096c7744041ba8e9 611 SUPERFAMILY SSF53850 58 600 3.57E-113 T 11-10-2018 AL543_04170 d60935fb17b4142e096c7744041ba8e9 611 PIRSF PIRSF002741 22 602 3.7E-123 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL543_04170 d60935fb17b4142e096c7744041ba8e9 611 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 106 512 1.5E-77 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain AL543_04170 d60935fb17b4142e096c7744041ba8e9 611 Gene3D G3DSA:3.40.190.10 39 597 1.1E-223 T 11-10-2018 AL543_19130 9f80af7eee96fb15099fe225b04a69ab 332 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 7 312 2.9E-133 T 11-10-2018 AL543_19130 9f80af7eee96fb15099fe225b04a69ab 332 SUPERFAMILY SSF51604 105 322 1.83E-44 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AL543_19130 9f80af7eee96fb15099fe225b04a69ab 332 Gene3D G3DSA:3.30.390.10 4 306 4.1E-120 T 11-10-2018 IPR029017 Enolase-like, N-terminal AL543_19130 9f80af7eee96fb15099fe225b04a69ab 332 Pfam PF13378 Enolase C-terminal domain-like 130 279 9.3E-12 T 11-10-2018 IPR029065 Enolase C-terminal domain-like AL543_19130 9f80af7eee96fb15099fe225b04a69ab 332 Gene3D G3DSA:3.20.20.120 99 300 4.1E-120 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AL543_19130 9f80af7eee96fb15099fe225b04a69ab 332 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 4 326 21.816 T 11-10-2018 IPR010196 o-Succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 AL543_19130 9f80af7eee96fb15099fe225b04a69ab 332 SMART SM00922 116 211 6.5E-5 T 11-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AL543_19130 9f80af7eee96fb15099fe225b04a69ab 332 SUPERFAMILY SSF54826 1 99 2.55E-28 T 11-10-2018 AL543_00455 797ff234140488ec63027d04fb82ac0f 343 SUPERFAMILY SSF81345 5 337 3.53E-82 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AL543_00455 797ff234140488ec63027d04fb82ac0f 343 Gene3D G3DSA:1.10.3470.10 3 342 3.2E-103 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AL543_00455 797ff234140488ec63027d04fb82ac0f 343 Pfam PF01032 FecCD transport family 19 336 8.1E-90 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AL543_10395 03832cc880f0d69541b8eb7a92ac5d74 244 Pfam PF08139 Prokaryotic membrane lipoprotein lipid attachment site 3 35 3.6E-8 T 11-10-2018 IPR012640 Membrane lipoprotein, lipid attachment site AL543_10395 03832cc880f0d69541b8eb7a92ac5d74 244 PIRSF PIRSF028160 10 244 6.4E-121 T 11-10-2018 IPR016872 Uncharacterised conserved protein UCP028160 AL543_10395 03832cc880f0d69541b8eb7a92ac5d74 244 Pfam PF07356 Protein of unknown function (DUF1481) 48 241 1.7E-59 T 11-10-2018 IPR010858 Protein of unknown function DUF1481 AL543_11980 8ce5a1ec0838de1dff9de15ea3b8ec6a 367 Pfam PF03969 AFG1-like ATPase 1 363 6.2E-169 T 11-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 AL543_11980 8ce5a1ec0838de1dff9de15ea3b8ec6a 367 SUPERFAMILY SSF52540 59 202 4.0E-14 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_11980 8ce5a1ec0838de1dff9de15ea3b8ec6a 367 Hamap MF_01919 Cell division protein ZapE [zapE]. 1 367 54.448 T 11-10-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 AL543_11980 8ce5a1ec0838de1dff9de15ea3b8ec6a 367 Gene3D G3DSA:3.40.50.300 5 189 7.1E-21 T 11-10-2018 AL543_11925 64813eb7cd260de05a8a035c7a4495b6 172 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 34.755 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AL543_11925 64813eb7cd260de05a8a035c7a4495b6 172 Gene3D G3DSA:3.30.1360.80 1 172 4.7E-72 T 11-10-2018 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AL543_11925 64813eb7cd260de05a8a035c7a4495b6 172 PIRSF PIRSF006160 1 162 4.1E-65 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AL543_11925 64813eb7cd260de05a8a035c7a4495b6 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 1.1E-50 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AL543_11925 64813eb7cd260de05a8a035c7a4495b6 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 1.1E-50 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AL543_11925 64813eb7cd260de05a8a035c7a4495b6 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 1.1E-50 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AL543_11925 64813eb7cd260de05a8a035c7a4495b6 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 1.1E-50 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AL543_11925 64813eb7cd260de05a8a035c7a4495b6 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 1.1E-50 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AL543_11925 64813eb7cd260de05a8a035c7a4495b6 172 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 153 2.8E-60 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AL543_11925 64813eb7cd260de05a8a035c7a4495b6 172 SUPERFAMILY SSF63411 4 162 6.68E-65 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL543_11925 64813eb7cd260de05a8a035c7a4495b6 172 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 154 1.0E-83 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AL543_11340 14908dc7b033f9086f15150ed86835c3 854 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 33 728 9.7E-210 T 11-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ AL543_11340 14908dc7b033f9086f15150ed86835c3 854 Pfam PF11874 Domain of unknown function (DUF3394) 673 852 9.1E-69 T 11-10-2018 IPR021814 Protein of unknown function DUF3394 AL543_11340 14908dc7b033f9086f15150ed86835c3 854 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 134 669 7.1E-77 T 11-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AL543_16785 881d47af88a6b75cd85528916983cd21 492 Pfam PF01189 16S rRNA methyltransferase RsmB/F 130 325 4.8E-49 T 11-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 AL543_16785 881d47af88a6b75cd85528916983cd21 492 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 205 216 - T 11-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 AL543_16785 881d47af88a6b75cd85528916983cd21 492 Gene3D G3DSA:3.40.50.150 20 327 4.7E-99 T 11-10-2018 AL543_16785 881d47af88a6b75cd85528916983cd21 492 Gene3D G3DSA:2.30.130.90 328 492 9.8E-70 T 11-10-2018 AL543_16785 881d47af88a6b75cd85528916983cd21 492 SUPERFAMILY SSF53335 19 327 5.41E-64 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL543_16785 881d47af88a6b75cd85528916983cd21 492 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 26 122 2.9E-30 T 11-10-2018 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 AL543_16785 881d47af88a6b75cd85528916983cd21 492 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 256 272 2.7E-28 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AL543_16785 881d47af88a6b75cd85528916983cd21 492 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 310 327 2.7E-28 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AL543_16785 881d47af88a6b75cd85528916983cd21 492 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 139 149 2.7E-28 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AL543_16785 881d47af88a6b75cd85528916983cd21 492 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 206 218 2.7E-28 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AL543_16785 881d47af88a6b75cd85528916983cd21 492 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 108 122 2.7E-28 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AL543_16785 881d47af88a6b75cd85528916983cd21 492 Hamap MF_01579 Ribosomal RNA small subunit methyltransferase F [rsmF]. 24 492 63.582 T 11-10-2018 IPR023545 rRNA small subunit methyltransferase F GO:0008649 AL543_16785 881d47af88a6b75cd85528916983cd21 492 TIGRFAM TIGR00446 nop2p: NOL1/NOP2/sun family putative RNA methylase 59 327 1.4E-100 T 11-10-2018 IPR011023 Nop2p GO:0003723|GO:0006364|GO:0008757 Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 AL543_16785 881d47af88a6b75cd85528916983cd21 492 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 438 487 3.7E-11 T 11-10-2018 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain AL543_18990 fb4bd56e994d1fdddbd5a686f6e8c723 259 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 255 3.4E-14 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL543_18990 fb4bd56e994d1fdddbd5a686f6e8c723 259 SUPERFAMILY SSF161098 10 257 6.73E-41 T 11-10-2018 IPR035906 MetI-like superfamily AL543_18990 fb4bd56e994d1fdddbd5a686f6e8c723 259 Gene3D G3DSA:1.10.3720.10 2 252 1.0E-35 T 11-10-2018 IPR035906 MetI-like superfamily AL543_19385 b701f206c4fe188f7c91f9ecdecc72e2 307 Gene3D G3DSA:3.30.70.250 125 197 1.2E-110 T 11-10-2018 AL543_19385 b701f206c4fe188f7c91f9ecdecc72e2 307 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 1.1E-127 T 11-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 AL543_19385 b701f206c4fe188f7c91f9ecdecc72e2 307 SUPERFAMILY SSF55048 128 197 1.96E-17 T 11-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AL543_19385 b701f206c4fe188f7c91f9ecdecc72e2 307 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 306 2.4E-46 T 11-10-2018 IPR020801 Polyketide synthase, acyl transferase domain AL543_19385 b701f206c4fe188f7c91f9ecdecc72e2 307 SUPERFAMILY SSF52151 4 305 4.71E-82 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AL543_19385 b701f206c4fe188f7c91f9ecdecc72e2 307 Gene3D G3DSA:3.40.366.10 5 286 1.2E-110 T 11-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 AL543_19385 b701f206c4fe188f7c91f9ecdecc72e2 307 PIRSF PIRSF000446 1 307 4.3E-135 T 11-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 AL543_19385 b701f206c4fe188f7c91f9ecdecc72e2 307 Pfam PF00698 Acyl transferase domain 7 296 1.4E-38 T 11-10-2018 IPR014043 Acyl transferase AL543_13425 96d4483e930f0d65ec630df3fa03338b 381 Gene3D G3DSA:2.10.230.10 141 211 1.8E-24 T 11-10-2018 AL543_13425 96d4483e930f0d65ec630df3fa03338b 381 SUPERFAMILY SSF46565 1 110 1.7E-35 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AL543_13425 96d4483e930f0d65ec630df3fa03338b 381 SUPERFAMILY SSF57938 136 212 2.22E-22 T 11-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily AL543_13425 96d4483e930f0d65ec630df3fa03338b 381 Pfam PF00684 DnaJ central domain 149 209 7.4E-15 T 11-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 AL543_13425 96d4483e930f0d65ec630df3fa03338b 381 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 11-10-2018 IPR018253 DnaJ domain, conserved site AL543_13425 96d4483e930f0d65ec630df3fa03338b 381 PRINTS PR00625 DnaJ domain signature 7 25 6.6E-32 T 11-10-2018 IPR001623 DnaJ domain AL543_13425 96d4483e930f0d65ec630df3fa03338b 381 PRINTS PR00625 DnaJ domain signature 25 40 6.6E-32 T 11-10-2018 IPR001623 DnaJ domain AL543_13425 96d4483e930f0d65ec630df3fa03338b 381 PRINTS PR00625 DnaJ domain signature 42 62 6.6E-32 T 11-10-2018 IPR001623 DnaJ domain AL543_13425 96d4483e930f0d65ec630df3fa03338b 381 PRINTS PR00625 DnaJ domain signature 62 81 6.6E-32 T 11-10-2018 IPR001623 DnaJ domain AL543_13425 96d4483e930f0d65ec630df3fa03338b 381 SUPERFAMILY SSF49493 116 262 7.98E-20 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AL543_13425 96d4483e930f0d65ec630df3fa03338b 381 SMART SM00271 4 62 8.0E-31 T 11-10-2018 IPR001623 DnaJ domain AL543_13425 96d4483e930f0d65ec630df3fa03338b 381 Gene3D G3DSA:2.60.260.20 257 365 1.5E-28 T 11-10-2018 AL543_13425 96d4483e930f0d65ec630df3fa03338b 381 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 351 1.9E-139 T 11-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 AL543_13425 96d4483e930f0d65ec630df3fa03338b 381 Gene3D G3DSA:1.10.287.110 1 116 1.1E-35 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AL543_13425 96d4483e930f0d65ec630df3fa03338b 381 Pfam PF01556 DnaJ C terminal domain 123 335 1.7E-45 T 11-10-2018 IPR002939 Chaperone DnaJ, C-terminal AL543_13425 96d4483e930f0d65ec630df3fa03338b 381 SUPERFAMILY SSF49493 261 346 3.53E-22 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AL543_13425 96d4483e930f0d65ec630df3fa03338b 381 Pfam PF00226 DnaJ domain 5 67 3.9E-27 T 11-10-2018 IPR001623 DnaJ domain AL543_13425 96d4483e930f0d65ec630df3fa03338b 381 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 375 42.601 T 11-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 AL543_18875 e38dd537793165c1f07a62edfd55a182 90 Gene3D G3DSA:4.10.520.10 1 90 5.5E-36 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AL543_18875 e38dd537793165c1f07a62edfd55a182 90 SMART SM00411 1 90 3.9E-43 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL543_18875 e38dd537793165c1f07a62edfd55a182 90 SUPERFAMILY SSF47729 1 90 9.27E-32 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AL543_18875 e38dd537793165c1f07a62edfd55a182 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AL543_18875 e38dd537793165c1f07a62edfd55a182 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 5.2E-21 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL543_18875 e38dd537793165c1f07a62edfd55a182 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 5.2E-21 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL543_18875 e38dd537793165c1f07a62edfd55a182 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 5.2E-21 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL543_18875 e38dd537793165c1f07a62edfd55a182 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 7.7E-34 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL543_07500 96492779a0f171e182de9cf2c2ce44c8 187 Gene3D G3DSA:2.60.450.10 59 186 1.1E-36 T 11-10-2018 AL543_07500 96492779a0f171e182de9cf2c2ce44c8 187 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 3 185 25.194 T 11-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 AL543_07500 96492779a0f171e182de9cf2c2ce44c8 187 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 5 182 2.5E-49 T 11-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 AL543_07500 96492779a0f171e182de9cf2c2ce44c8 187 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 9 183 9.1E-50 T 11-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related AL543_07500 96492779a0f171e182de9cf2c2ce44c8 187 PIRSF PIRSF028513 4 185 1.0E-29 T 11-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 AL543_12300 f750a88f2a562da47c15e8e197433f7f 277 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 51 64 - T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL543_12300 f750a88f2a562da47c15e8e197433f7f 277 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL543_12300 f750a88f2a562da47c15e8e197433f7f 277 Pfam PF00809 Pterin binding enzyme 18 258 1.8E-89 T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL543_12300 f750a88f2a562da47c15e8e197433f7f 277 Gene3D G3DSA:3.20.20.20 2 276 3.1E-113 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL543_12300 f750a88f2a562da47c15e8e197433f7f 277 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 17 272 2.5E-105 T 11-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 AL543_12300 f750a88f2a562da47c15e8e197433f7f 277 SUPERFAMILY SSF51717 8 275 8.63E-105 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL543_04175 8872b68a05733ba2878732ed8c31644f 360 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 148 355 3.3E-36 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL543_04175 8872b68a05733ba2878732ed8c31644f 360 SUPERFAMILY SSF161098 124 341 1.57E-16 T 11-10-2018 IPR035906 MetI-like superfamily AL543_04175 8872b68a05733ba2878732ed8c31644f 360 Gene3D G3DSA:1.10.3720.10 119 349 1.7E-19 T 11-10-2018 IPR035906 MetI-like superfamily AL543_03300 d0b9c2f83d87679f1b8dc2c767953e23 384 Gene3D G3DSA:1.20.1250.20 10 192 1.1E-16 T 11-10-2018 AL543_03300 d0b9c2f83d87679f1b8dc2c767953e23 384 Gene3D G3DSA:1.20.1250.20 200 380 1.8E-12 T 11-10-2018 AL543_03300 d0b9c2f83d87679f1b8dc2c767953e23 384 Pfam PF07690 Major Facilitator Superfamily 16 341 1.3E-21 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL543_03300 d0b9c2f83d87679f1b8dc2c767953e23 384 SUPERFAMILY SSF103473 12 371 8.63E-36 T 11-10-2018 IPR036259 MFS transporter superfamily AL543_01595 9f5cd6180522208e060de17131a28a66 306 Gene3D G3DSA:1.10.3720.10 83 305 3.5E-32 T 11-10-2018 IPR035906 MetI-like superfamily AL543_01595 9f5cd6180522208e060de17131a28a66 306 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 29 303 1.7E-92 T 11-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 AL543_01595 9f5cd6180522208e060de17131a28a66 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 106 302 9.0E-23 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL543_01595 9f5cd6180522208e060de17131a28a66 306 SUPERFAMILY SSF161098 30 300 2.07E-35 T 11-10-2018 IPR035906 MetI-like superfamily AL543_20650 366f4f75829c0e9f034cedf8fcdbd97c 23 TIGRFAM TIGR02616 tnaC_leader: tryptophanase leader peptide 1 22 1.3E-12 T 11-10-2018 IPR012620 Tryptophanese operon leader peptide GO:0031554|GO:0031556 AL543_19320 6e67487ab10137f168afb87a7a384bb9 404 SUPERFAMILY SSF52151 25 272 1.05E-35 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AL543_19320 6e67487ab10137f168afb87a7a384bb9 404 Gene3D G3DSA:3.40.1090.10 123 246 3.1E-7 T 11-10-2018 AL543_19320 6e67487ab10137f168afb87a7a384bb9 404 Gene3D G3DSA:3.40.1090.10 13 118 1.9E-7 T 11-10-2018 AL543_19320 6e67487ab10137f168afb87a7a384bb9 404 Pfam PF01734 Patatin-like phospholipase 29 198 1.1E-18 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AL543_15900 ea4c56370eefcb334dcaace00ef038cd 196 Pfam PF13023 HD domain 16 178 4.2E-52 T 11-10-2018 IPR006674 HD domain AL543_15900 ea4c56370eefcb334dcaace00ef038cd 196 Gene3D G3DSA:1.10.3210.10 1 196 2.4E-55 T 11-10-2018 AL543_15900 ea4c56370eefcb334dcaace00ef038cd 196 SUPERFAMILY SSF109604 7 185 6.63E-44 T 11-10-2018 AL543_00920 41ff879eb3574f42b8cb63c5adaac273 310 Gene3D G3DSA:3.30.360.10 119 310 6.4E-60 T 11-10-2018 AL543_00920 41ff879eb3574f42b8cb63c5adaac273 310 SUPERFAMILY SSF55347 121 264 2.78E-47 T 11-10-2018 AL543_00920 41ff879eb3574f42b8cb63c5adaac273 310 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 119 4.0E-16 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AL543_00920 41ff879eb3574f42b8cb63c5adaac273 310 Gene3D G3DSA:3.40.50.720 1 118 1.6E-28 T 11-10-2018 AL543_00920 41ff879eb3574f42b8cb63c5adaac273 310 SUPERFAMILY SSF51735 1 166 3.16E-42 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_01100 5f81d40632b21b23c88666bc8e407d93 232 Gene3D G3DSA:3.40.605.10 4 222 9.9E-9 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AL543_01100 5f81d40632b21b23c88666bc8e407d93 232 SUPERFAMILY SSF53720 10 179 1.7E-11 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AL543_16230 0faba5fa1b0ed7995dbe0718bcc16c73 525 Pfam PF00990 Diguanylate cyclase, GGDEF domain 349 500 1.8E-31 T 11-10-2018 IPR000160 GGDEF domain AL543_16230 0faba5fa1b0ed7995dbe0718bcc16c73 525 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 347 504 2.1E-34 T 11-10-2018 IPR000160 GGDEF domain AL543_16230 0faba5fa1b0ed7995dbe0718bcc16c73 525 SMART SM00267 338 504 4.2E-42 T 11-10-2018 IPR000160 GGDEF domain AL543_16230 0faba5fa1b0ed7995dbe0718bcc16c73 525 Gene3D G3DSA:3.30.70.270 343 510 3.0E-43 T 11-10-2018 AL543_16230 0faba5fa1b0ed7995dbe0718bcc16c73 525 SUPERFAMILY SSF55073 354 504 7.3E-37 T 11-10-2018 IPR029787 Nucleotide cyclase AL543_16230 0faba5fa1b0ed7995dbe0718bcc16c73 525 SMART SM01079 71 266 2.3E-28 T 11-10-2018 IPR006189 CHASE domain AL543_16230 0faba5fa1b0ed7995dbe0718bcc16c73 525 Pfam PF03924 CHASE domain 76 264 5.2E-28 T 11-10-2018 IPR006189 CHASE domain AL543_16230 0faba5fa1b0ed7995dbe0718bcc16c73 525 Gene3D G3DSA:3.30.450.350 76 291 2.7E-10 T 11-10-2018 AL543_15175 5acbf64ac8c561f09b1f58729272d9b1 332 Pfam PF00591 Glycosyl transferase family, a/b domain 72 322 2.9E-101 T 11-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL543_15175 5acbf64ac8c561f09b1f58729272d9b1 332 SUPERFAMILY SSF52418 70 329 3.01E-92 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL543_15175 5acbf64ac8c561f09b1f58729272d9b1 332 Pfam PF02885 Glycosyl transferase family, helical bundle domain 3 63 3.9E-17 T 11-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL543_15175 5acbf64ac8c561f09b1f58729272d9b1 332 Gene3D G3DSA:3.40.1030.10 67 321 1.8E-123 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL543_15175 5acbf64ac8c561f09b1f58729272d9b1 332 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 5 330 2.8E-128 T 11-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 AL543_15175 5acbf64ac8c561f09b1f58729272d9b1 332 SUPERFAMILY SSF47648 1 67 4.71E-20 T 11-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL543_15175 5acbf64ac8c561f09b1f58729272d9b1 332 Gene3D G3DSA:1.20.970.10 10 183 1.8E-123 T 11-10-2018 AL543_15175 5acbf64ac8c561f09b1f58729272d9b1 332 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 3 331 39.427 T 11-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 AL543_11120 8e75dbd752743ef869cda59eb78ae6fa 291 Gene3D G3DSA:3.90.550.10 2 279 1.3E-81 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL543_11120 8e75dbd752743ef869cda59eb78ae6fa 291 SUPERFAMILY SSF53448 2 274 1.42E-64 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL543_11120 8e75dbd752743ef869cda59eb78ae6fa 291 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 3 264 6.4E-126 T 11-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 AL543_11120 8e75dbd752743ef869cda59eb78ae6fa 291 Pfam PF00483 Nucleotidyl transferase 10 267 2.1E-31 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AL543_01110 4114fa4b698cacff00a0d79500838922 287 Gene3D G3DSA:1.10.10.60 232 285 4.7E-15 T 11-10-2018 AL543_01110 4114fa4b698cacff00a0d79500838922 287 SUPERFAMILY SSF46689 234 283 2.24E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_01110 4114fa4b698cacff00a0d79500838922 287 Pfam PF02311 AraC-like ligand binding domain 44 153 1.3E-4 T 11-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AL543_01110 4114fa4b698cacff00a0d79500838922 287 SMART SM00342 197 280 9.5E-30 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL543_01110 4114fa4b698cacff00a0d79500838922 287 Pfam PF12833 Helix-turn-helix domain 203 282 7.1E-21 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL543_01110 4114fa4b698cacff00a0d79500838922 287 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 249 264 1.6E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL543_01110 4114fa4b698cacff00a0d79500838922 287 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 264 280 1.6E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL543_01110 4114fa4b698cacff00a0d79500838922 287 SUPERFAMILY SSF46689 184 231 4.93E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_01110 4114fa4b698cacff00a0d79500838922 287 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 234 276 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL543_01110 4114fa4b698cacff00a0d79500838922 287 Gene3D G3DSA:1.10.10.60 175 231 2.0E-11 T 11-10-2018 AL543_21410 2ed61ddf326a33790325a86d8b4fbdd8 63 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 3.5E-15 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL543_17095 2a7a21f67557e248a0fbd674cb54f112 404 Pfam PF12704 MacB-like periplasmic core domain 19 238 5.4E-23 T 11-10-2018 IPR025857 MacB-like periplasmic core domain AL543_17095 2a7a21f67557e248a0fbd674cb54f112 404 Pfam PF02687 FtsX-like permease family 305 396 9.2E-12 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AL543_08910 d82329e46fba033e6de513adca33ee49 71 Pfam PF13627 Prokaryotic lipoprotein-attachment site 39 61 1.4E-9 T 11-10-2018 IPR032831 Prokaryotic lipoprotein-attachment site AL543_13825 8484bf782af3962132b8f849084244ef 174 Pfam PF02563 Polysaccharide biosynthesis/export protein 21 95 5.7E-20 T 11-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 AL543_13825 8484bf782af3962132b8f849084244ef 174 Pfam PF10531 SLBB domain 101 142 1.1E-9 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL543_13825 8484bf782af3962132b8f849084244ef 174 Gene3D G3DSA:3.30.1950.10 28 99 1.5E-22 T 11-10-2018 AL543_13825 8484bf782af3962132b8f849084244ef 174 Gene3D G3DSA:3.10.560.10 21 170 1.5E-22 T 11-10-2018 AL543_11835 5bdf6f0e1c63984c69260918490b3086 860 Gene3D G3DSA:3.30.930.10 2 251 1.1E-119 T 11-10-2018 AL543_11835 5bdf6f0e1c63984c69260918490b3086 860 SUPERFAMILY SSF55186 551 712 1.83E-53 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 AL543_11835 5bdf6f0e1c63984c69260918490b3086 860 SUPERFAMILY SSF101353 255 459 6.67E-59 T 11-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 AL543_11835 5bdf6f0e1c63984c69260918490b3086 860 Gene3D G3DSA:2.40.30.130 468 551 9.6E-12 T 11-10-2018 AL543_11835 5bdf6f0e1c63984c69260918490b3086 860 Gene3D G3DSA:3.30.54.20 623 676 9.6E-52 T 11-10-2018 AL543_11835 5bdf6f0e1c63984c69260918490b3086 860 Gene3D G3DSA:3.10.310.40 748 857 1.8E-31 T 11-10-2018 AL543_11835 5bdf6f0e1c63984c69260918490b3086 860 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 839 0.0 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AL543_11835 5bdf6f0e1c63984c69260918490b3086 860 Pfam PF01411 tRNA synthetases class II (A) 7 555 4.5E-223 T 11-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 AL543_11835 5bdf6f0e1c63984c69260918490b3086 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 281 297 4.8E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AL543_11835 5bdf6f0e1c63984c69260918490b3086 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 4.8E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AL543_11835 5bdf6f0e1c63984c69260918490b3086 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 208 219 4.8E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AL543_11835 5bdf6f0e1c63984c69260918490b3086 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 235 248 4.8E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AL543_11835 5bdf6f0e1c63984c69260918490b3086 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 305 318 4.8E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AL543_11835 5bdf6f0e1c63984c69260918490b3086 860 SUPERFAMILY SSF50447 454 551 1.45E-18 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AL543_11835 5bdf6f0e1c63984c69260918490b3086 860 SUPERFAMILY SSF55681 3 254 1.02E-108 T 11-10-2018 AL543_11835 5bdf6f0e1c63984c69260918490b3086 860 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 860 197.523 T 11-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 AL543_11835 5bdf6f0e1c63984c69260918490b3086 860 Pfam PF02272 DHHA1 domain 718 856 5.6E-30 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 AL543_11835 5bdf6f0e1c63984c69260918490b3086 860 SMART SM00863 652 695 1.1E-21 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 AL543_11835 5bdf6f0e1c63984c69260918490b3086 860 Gene3D G3DSA:3.30.980.10 562 696 9.6E-52 T 11-10-2018 AL543_11835 5bdf6f0e1c63984c69260918490b3086 860 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 652 695 3.1E-18 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 AL543_03220 afc23e5a7feba30c9cc6f38775662a1d 481 Gene3D G3DSA:3.40.50.410 322 465 1.8E-7 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AL543_03220 afc23e5a7feba30c9cc6f38775662a1d 481 SUPERFAMILY SSF53300 318 474 6.16E-26 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AL543_03220 afc23e5a7feba30c9cc6f38775662a1d 481 SMART SM00327 320 479 1.3E-5 T 11-10-2018 IPR002035 von Willebrand factor, type A AL543_03220 afc23e5a7feba30c9cc6f38775662a1d 481 Pfam PF05762 VWA domain containing CoxE-like protein 319 448 1.3E-8 T 11-10-2018 IPR008912 Uncharacterised protein family CoxE-like AL543_03820 cb984021fc1cce201357c964e7336320 207 PRINTS PR01021 OMPA domain signature 132 147 3.0E-12 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL543_03820 cb984021fc1cce201357c964e7336320 207 PRINTS PR01021 OMPA domain signature 147 163 3.0E-12 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL543_03820 cb984021fc1cce201357c964e7336320 207 PRINTS PR01021 OMPA domain signature 102 124 3.0E-12 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL543_03820 cb984021fc1cce201357c964e7336320 207 Pfam PF00691 OmpA family 102 196 8.3E-20 T 11-10-2018 IPR006665 OmpA-like domain AL543_03820 cb984021fc1cce201357c964e7336320 207 Gene3D G3DSA:3.30.1330.60 68 205 1.2E-35 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL543_03820 cb984021fc1cce201357c964e7336320 207 SUPERFAMILY SSF103088 86 201 7.19E-33 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL543_15870 2872df1e716237e272a409e502b0878a 505 SUPERFAMILY SSF117457 316 489 1.96E-64 T 11-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 AL543_15870 2872df1e716237e272a409e502b0878a 505 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 325 488 3.4E-51 T 11-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AL543_15870 2872df1e716237e272a409e502b0878a 505 Gene3D G3DSA:3.20.130.10 307 490 5.0E-63 T 11-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 AL543_15870 2872df1e716237e272a409e502b0878a 505 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 284 1.3E-63 T 11-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 AL543_15870 2872df1e716237e272a409e502b0878a 505 PIRSF PIRSF001394 1 505 1.2E-215 T 11-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 AL543_15870 2872df1e716237e272a409e502b0878a 505 Pfam PF05681 Fumarate hydratase (Fumerase) 11 285 4.3E-98 T 11-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 AL543_15870 2872df1e716237e272a409e502b0878a 505 Pfam PF05683 Fumarase C-terminus 289 490 2.1E-84 T 11-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AL543_07620 5505e2ba17d6f4e950569b3221b063cc 183 Gene3D G3DSA:3.40.30.10 20 179 2.8E-5 T 11-10-2018 AL543_07620 5505e2ba17d6f4e950569b3221b063cc 183 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 183 3.4E-96 T 11-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ AL543_07620 5505e2ba17d6f4e950569b3221b063cc 183 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 24 182 7.4E-77 T 11-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ AL543_08860 8238a7203d8e9ecc89bea28665bae3b6 331 Pfam PF12146 Serine aminopeptidase, S33 53 310 7.8E-63 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 AL543_08860 8238a7203d8e9ecc89bea28665bae3b6 331 SUPERFAMILY SSF53474 38 321 8.18E-38 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL543_08860 8238a7203d8e9ecc89bea28665bae3b6 331 Gene3D G3DSA:3.40.50.1820 25 328 5.4E-47 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL543_01875 a6b5d0960f52944d589096373f0d9811 83 Pfam PF11212 Protein of unknown function (DUF2999) 1 82 2.5E-43 T 11-10-2018 IPR021376 Protein of unknown function DUF2999 AL543_19440 bfa16bd492cf944fe0956e6490231382 443 Pfam PF01609 Transposase DDE domain 126 357 1.8E-22 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AL543_19440 bfa16bd492cf944fe0956e6490231382 443 Pfam PF13006 Insertion element 4 transposase N-terminal 16 108 1.9E-25 T 11-10-2018 IPR024473 Transposase, IS4, N-terminal AL543_19440 bfa16bd492cf944fe0956e6490231382 443 SUPERFAMILY SSF53098 101 412 9.86E-19 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_18520 bfa16bd492cf944fe0956e6490231382 443 Pfam PF01609 Transposase DDE domain 126 357 1.8E-22 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AL543_18520 bfa16bd492cf944fe0956e6490231382 443 Pfam PF13006 Insertion element 4 transposase N-terminal 16 108 1.9E-25 T 11-10-2018 IPR024473 Transposase, IS4, N-terminal AL543_18520 bfa16bd492cf944fe0956e6490231382 443 SUPERFAMILY SSF53098 101 412 9.86E-19 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_01250 c4da1fdc59a98f539e065148598d55cd 548 Pfam PF00884 Sulfatase 240 528 9.8E-49 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 AL543_01250 c4da1fdc59a98f539e065148598d55cd 548 Gene3D G3DSA:3.40.720.10 221 547 4.3E-85 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AL543_01250 c4da1fdc59a98f539e065148598d55cd 548 Pfam PF08019 Domain of unknown function (DUF1705) 57 208 1.3E-49 T 11-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 AL543_01250 c4da1fdc59a98f539e065148598d55cd 548 SUPERFAMILY SSF53649 240 533 3.6E-22 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AL543_20295 738e174fd89efa7037a51ff996bae2b5 312 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 170 306 3.6E-19 T 11-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 AL543_20295 738e174fd89efa7037a51ff996bae2b5 312 Pfam PF10135 Rod binding protein 53 102 8.8E-16 T 11-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal AL543_20295 738e174fd89efa7037a51ff996bae2b5 312 SMART SM00047 149 310 1.1E-70 T 11-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 AL543_20295 738e174fd89efa7037a51ff996bae2b5 312 Gene3D G3DSA:2.10.70.40 198 249 5.8E-45 T 11-10-2018 AL543_20295 738e174fd89efa7037a51ff996bae2b5 312 PRINTS PR01002 Flagellar protein FlgJ signature 31 54 4.6E-30 T 11-10-2018 AL543_20295 738e174fd89efa7037a51ff996bae2b5 312 PRINTS PR01002 Flagellar protein FlgJ signature 224 245 4.6E-30 T 11-10-2018 AL543_20295 738e174fd89efa7037a51ff996bae2b5 312 PRINTS PR01002 Flagellar protein FlgJ signature 246 267 4.6E-30 T 11-10-2018 AL543_20295 738e174fd89efa7037a51ff996bae2b5 312 PRINTS PR01002 Flagellar protein FlgJ signature 79 101 4.6E-30 T 11-10-2018 AL543_20295 738e174fd89efa7037a51ff996bae2b5 312 PRINTS PR01002 Flagellar protein FlgJ signature 183 201 4.6E-30 T 11-10-2018 AL543_20295 738e174fd89efa7037a51ff996bae2b5 312 PRINTS PR01002 Flagellar protein FlgJ signature 159 182 4.6E-30 T 11-10-2018 AL543_20295 738e174fd89efa7037a51ff996bae2b5 312 PRINTS PR01002 Flagellar protein FlgJ signature 289 307 4.6E-30 T 11-10-2018 AL543_20295 738e174fd89efa7037a51ff996bae2b5 312 Gene3D G3DSA:1.10.530.10 164 302 5.8E-45 T 11-10-2018 AL543_20295 738e174fd89efa7037a51ff996bae2b5 312 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 11 306 1.7E-103 T 11-10-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 AL543_00370 0f00418f445eb9fdc1a7797819c87ebf 238 Gene3D G3DSA:3.40.50.1360 1 238 2.1E-96 T 11-10-2018 AL543_00370 0f00418f445eb9fdc1a7797819c87ebf 238 SUPERFAMILY SSF100950 3 237 4.19E-63 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AL543_00370 0f00418f445eb9fdc1a7797819c87ebf 238 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 11 237 6.5E-54 T 11-10-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 AL543_00370 0f00418f445eb9fdc1a7797819c87ebf 238 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 10 226 2.4E-61 T 11-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 AL543_20125 8908434e2a2ddda4f66a01a187341d3c 160 Pfam PF04073 Aminoacyl-tRNA editing domain 32 147 4.3E-26 T 11-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AL543_20125 8908434e2a2ddda4f66a01a187341d3c 160 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 156 8.4E-60 T 11-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC AL543_20125 8908434e2a2ddda4f66a01a187341d3c 160 Gene3D G3DSA:3.90.960.10 1 159 2.0E-60 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AL543_20125 8908434e2a2ddda4f66a01a187341d3c 160 PIRSF PIRSF006181 1 159 1.7E-54 T 11-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC AL543_20125 8908434e2a2ddda4f66a01a187341d3c 160 SUPERFAMILY SSF55826 2 157 1.96E-45 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AL543_04355 76bac3497a3e169f9ea7f6ef13175450 93 Pfam PF02303 Helix-destabilising protein 2 84 3.0E-29 T 11-10-2018 IPR003512 Bacteriophage M13, G5P, DNA-binding GO:0003697|GO:0006260 AL543_04355 76bac3497a3e169f9ea7f6ef13175450 93 SUPERFAMILY SSF50249 1 86 3.08E-28 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL543_04355 76bac3497a3e169f9ea7f6ef13175450 93 ProDom PD015272 DNA DNA-BINDING SINGLE-STRANDED PHAGE-RELATED HELIX-DESTABILIZING REPLICATION BINDING GPV 3D-STRUCTURE DIRECT 1 84 1.0E-40 T 11-10-2018 IPR003512 Bacteriophage M13, G5P, DNA-binding GO:0003697|GO:0006260 AL543_04355 76bac3497a3e169f9ea7f6ef13175450 93 Gene3D G3DSA:2.40.50.140 1 89 1.9E-27 T 11-10-2018 AL543_04380 76bac3497a3e169f9ea7f6ef13175450 93 Pfam PF02303 Helix-destabilising protein 2 84 3.0E-29 T 11-10-2018 IPR003512 Bacteriophage M13, G5P, DNA-binding GO:0003697|GO:0006260 AL543_04380 76bac3497a3e169f9ea7f6ef13175450 93 SUPERFAMILY SSF50249 1 86 3.08E-28 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL543_04380 76bac3497a3e169f9ea7f6ef13175450 93 ProDom PD015272 DNA DNA-BINDING SINGLE-STRANDED PHAGE-RELATED HELIX-DESTABILIZING REPLICATION BINDING GPV 3D-STRUCTURE DIRECT 1 84 1.0E-40 T 11-10-2018 IPR003512 Bacteriophage M13, G5P, DNA-binding GO:0003697|GO:0006260 AL543_04380 76bac3497a3e169f9ea7f6ef13175450 93 Gene3D G3DSA:2.40.50.140 1 89 1.9E-27 T 11-10-2018 AL543_00400 0c3c05330ed700530f0eadcb82032493 450 PIRSF PIRSF002746 1 450 2.2E-116 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AL543_00400 0c3c05330ed700530f0eadcb82032493 450 Pfam PF02447 GntP family permease 1 448 1.3E-97 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AL543_03475 f53b945ffe7e6170284d9f558b289e4d 94 Pfam PF13670 Peptidase propeptide and YPEB domain 10 91 6.1E-26 T 11-10-2018 IPR025711 PepSY domain AL543_18295 7ad122778ec100bca150341ea085b369 173 ProSitePatterns PS01068 OmpA-like domain. 105 149 - T 11-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 AL543_18295 7ad122778ec100bca150341ea085b369 173 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 5 173 30.965 T 11-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 AL543_18295 7ad122778ec100bca150341ea085b369 173 Pfam PF00691 OmpA family 72 167 1.6E-21 T 11-10-2018 IPR006665 OmpA-like domain AL543_18295 7ad122778ec100bca150341ea085b369 173 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 70 173 7.3E-45 T 11-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 AL543_18295 7ad122778ec100bca150341ea085b369 173 SUPERFAMILY SSF103088 64 173 4.05E-34 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL543_18295 7ad122778ec100bca150341ea085b369 173 PRINTS PR01021 OMPA domain signature 73 95 5.2E-16 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL543_18295 7ad122778ec100bca150341ea085b369 173 PRINTS PR01021 OMPA domain signature 103 118 5.2E-16 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL543_18295 7ad122778ec100bca150341ea085b369 173 PRINTS PR01021 OMPA domain signature 118 134 5.2E-16 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL543_18295 7ad122778ec100bca150341ea085b369 173 Gene3D G3DSA:3.30.1330.60 43 173 8.0E-42 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL543_08145 fea7e38a8ab2e5c86610051dfb4f2168 340 Pfam PF04055 Radical SAM superfamily 118 287 2.6E-11 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL543_08145 fea7e38a8ab2e5c86610051dfb4f2168 340 PIRSF PIRSF004911 5 340 6.1E-112 T 11-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase AL543_08145 fea7e38a8ab2e5c86610051dfb4f2168 340 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 16 335 3.2E-156 T 11-10-2018 IPR022462 Lysine-2,3-aminomutase-like AL543_08145 fea7e38a8ab2e5c86610051dfb4f2168 340 Gene3D G3DSA:3.20.20.70 51 334 1.6E-89 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_08145 fea7e38a8ab2e5c86610051dfb4f2168 340 TIGRFAM TIGR00238 TIGR00238: KamA family protein 4 328 7.4E-126 T 11-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase AL543_08145 fea7e38a8ab2e5c86610051dfb4f2168 340 Pfam PF13353 4Fe-4S single cluster domain 111 183 1.6E-7 T 11-10-2018 AL543_08145 fea7e38a8ab2e5c86610051dfb4f2168 340 SUPERFAMILY SSF102114 102 324 9.42E-26 T 11-10-2018 AL543_01050 61394e851f40f5feda7e88ad4f1e25c6 402 Pfam PF01609 Transposase DDE domain 90 322 7.2E-24 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AL543_01050 61394e851f40f5feda7e88ad4f1e25c6 402 SUPERFAMILY SSF53098 1 381 1.37E-67 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_07395 91a4f3094f8940aa3da9d05a1e9c7dee 320 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 196 218 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AL543_07395 91a4f3094f8940aa3da9d05a1e9c7dee 320 Gene3D G3DSA:3.40.50.720 99 288 1.3E-112 T 11-10-2018 AL543_07395 91a4f3094f8940aa3da9d05a1e9c7dee 320 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 225 241 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AL543_07395 91a4f3094f8940aa3da9d05a1e9c7dee 320 SUPERFAMILY SSF52283 27 122 4.16E-30 T 11-10-2018 AL543_07395 91a4f3094f8940aa3da9d05a1e9c7dee 320 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 32 320 1.9E-23 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 AL543_07395 91a4f3094f8940aa3da9d05a1e9c7dee 320 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 289 2.3E-56 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AL543_07395 91a4f3094f8940aa3da9d05a1e9c7dee 320 Gene3D G3DSA:3.40.50.720 27 317 1.3E-112 T 11-10-2018 AL543_07395 91a4f3094f8940aa3da9d05a1e9c7dee 320 SUPERFAMILY SSF51735 103 290 6.23E-53 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_13600 d19d5a294f3a414f1d7cff9dbe509e0b 309 Gene3D G3DSA:1.10.10.10 7 95 4.0E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_13600 d19d5a294f3a414f1d7cff9dbe509e0b 309 SUPERFAMILY SSF46785 3 85 2.72E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_13600 d19d5a294f3a414f1d7cff9dbe509e0b 309 Gene3D G3DSA:3.40.190.10 163 261 2.7E-59 T 11-10-2018 AL543_13600 d19d5a294f3a414f1d7cff9dbe509e0b 309 SUPERFAMILY SSF53850 92 297 1.25E-37 T 11-10-2018 AL543_13600 d19d5a294f3a414f1d7cff9dbe509e0b 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.9E-10 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_13600 d19d5a294f3a414f1d7cff9dbe509e0b 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.9E-10 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_13600 d19d5a294f3a414f1d7cff9dbe509e0b 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.9E-10 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_13600 d19d5a294f3a414f1d7cff9dbe509e0b 309 Pfam PF03466 LysR substrate binding domain 91 291 5.0E-36 T 11-10-2018 IPR005119 LysR, substrate-binding AL543_13600 d19d5a294f3a414f1d7cff9dbe509e0b 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 3.1E-21 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_13600 d19d5a294f3a414f1d7cff9dbe509e0b 309 Gene3D G3DSA:3.40.190.10 103 288 2.7E-59 T 11-10-2018 AL543_16775 36cc3cee66f19993a731978f0a4012f5 414 Pfam PF04403 Paraquat-inducible protein A 57 208 6.1E-40 T 11-10-2018 IPR007498 Intermembrane transport protein PqiA-like AL543_16775 36cc3cee66f19993a731978f0a4012f5 414 Pfam PF04403 Paraquat-inducible protein A 252 406 1.6E-49 T 11-10-2018 IPR007498 Intermembrane transport protein PqiA-like AL543_16775 36cc3cee66f19993a731978f0a4012f5 414 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 12 405 1.5E-104 T 11-10-2018 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type AL543_17615 8a87d2e3d5ce2309d7884f1efd94b722 147 Gene3D G3DSA:2.40.128.270 39 142 1.7E-30 T 11-10-2018 IPR038670 HslJ-like superfamily AL543_17615 8a87d2e3d5ce2309d7884f1efd94b722 147 Pfam PF03724 META domain 33 137 6.4E-28 T 11-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ AL543_00865 30dd6c7380eac4d7935795389217214b 350 PIRSF PIRSF001361 1 350 1.2E-163 T 11-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AL543_00865 30dd6c7380eac4d7935795389217214b 350 SUPERFAMILY SSF51569 6 347 1.15E-138 T 11-10-2018 AL543_00865 30dd6c7380eac4d7935795389217214b 350 Gene3D G3DSA:3.20.20.70 1 349 1.9E-166 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_00865 30dd6c7380eac4d7935795389217214b 350 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 5 348 1.4E-170 T 11-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AL543_00865 30dd6c7380eac4d7935795389217214b 350 Pfam PF00793 DAHP synthetase I family 40 337 5.9E-108 T 11-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AL543_05675 88456b11f63fb776ad7343976985af68 954 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 8 952 25.446 T 11-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AL543_05675 88456b11f63fb776ad7343976985af68 954 SUPERFAMILY SSF53383 475 947 9.26E-98 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL543_05675 88456b11f63fb776ad7343976985af68 954 SUPERFAMILY SSF53383 17 438 1.06E-98 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL543_05675 88456b11f63fb776ad7343976985af68 954 Gene3D G3DSA:3.40.640.10 95 353 2.6E-102 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL543_05675 88456b11f63fb776ad7343976985af68 954 Gene3D G3DSA:3.40.640.10 522 747 6.0E-58 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL543_05675 88456b11f63fb776ad7343976985af68 954 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 17 946 0.0 T 11-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AL543_05675 88456b11f63fb776ad7343976985af68 954 Pfam PF02347 Glycine cleavage system P-protein 17 438 1.1E-174 T 11-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AL543_05675 88456b11f63fb776ad7343976985af68 954 Pfam PF02347 Glycine cleavage system P-protein 458 736 1.1E-8 T 11-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AL543_05675 88456b11f63fb776ad7343976985af68 954 Gene3D G3DSA:3.90.1150.10 760 896 3.6E-41 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL543_16910 63f29ac7a79bc3a2423271adfab876f4 240 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_16910 63f29ac7a79bc3a2423271adfab876f4 240 SUPERFAMILY SSF52540 5 216 2.72E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_16910 63f29ac7a79bc3a2423271adfab876f4 240 Gene3D G3DSA:3.40.50.300 4 236 1.6E-51 T 11-10-2018 AL543_16910 63f29ac7a79bc3a2423271adfab876f4 240 Pfam PF00005 ABC transporter 26 164 1.1E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_16910 63f29ac7a79bc3a2423271adfab876f4 240 SMART SM00382 29 201 1.9E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_06310 5295324124089474d85edfa7901e165c 446 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 446 4.3E-211 T 11-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 AL543_06310 5295324124089474d85edfa7901e165c 446 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 446 46.2 T 11-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 AL543_06310 5295324124089474d85edfa7901e165c 446 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 1 256 1.7E-114 T 11-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 AL543_06310 5295324124089474d85edfa7901e165c 446 Pfam PF11973 NQRA C-terminal domain 261 310 4.9E-21 T 11-10-2018 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 AL543_10030 c4fb31567f89eb15bb3fae63e156e2b3 404 SUPERFAMILY SSF56349 64 386 1.77E-18 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL543_10030 c4fb31567f89eb15bb3fae63e156e2b3 404 Pfam PF00589 Phage integrase family 216 380 5.3E-9 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL543_10030 c4fb31567f89eb15bb3fae63e156e2b3 404 Gene3D G3DSA:1.10.443.10 189 394 8.4E-22 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AL543_14810 8089eb4b2324033cee2424cafe6de293 136 Pfam PF09905 DNA-binding protein VF530 11 73 2.3E-30 T 11-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 AL543_14810 8089eb4b2324033cee2424cafe6de293 136 Gene3D G3DSA:1.10.720.30 19 78 1.2E-25 T 11-10-2018 IPR036361 SAP domain superfamily AL543_12190 2bf11d37d5f16fee57969c8b2ec1db96 331 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_12190 2bf11d37d5f16fee57969c8b2ec1db96 331 Gene3D G3DSA:3.40.50.300 9 331 4.3E-79 T 11-10-2018 AL543_12190 2bf11d37d5f16fee57969c8b2ec1db96 331 SUPERFAMILY SSF52540 10 262 9.05E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_12190 2bf11d37d5f16fee57969c8b2ec1db96 331 SMART SM00382 43 241 4.6E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_12190 2bf11d37d5f16fee57969c8b2ec1db96 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 308 8.6E-17 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL543_12190 2bf11d37d5f16fee57969c8b2ec1db96 331 Pfam PF00005 ABC transporter 35 192 1.5E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_12190 2bf11d37d5f16fee57969c8b2ec1db96 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 241 328 1.4E-22 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL543_07890 d16628a203f465fd0bd188e4e9f2c972 66 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 2 60 9.5E-32 T 11-10-2018 IPR012658 Conserved hypothetical protein CHP02443 AL543_07890 d16628a203f465fd0bd188e4e9f2c972 66 Pfam PF09526 Probable metal-binding protein (DUF2387) 4 56 6.8E-20 T 11-10-2018 IPR012658 Conserved hypothetical protein CHP02443 AL543_07085 f1daf76e21c95cf5bcc49096c604006d 430 SMART SM00267 233 409 4.0E-39 T 11-10-2018 IPR000160 GGDEF domain AL543_07085 f1daf76e21c95cf5bcc49096c604006d 430 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 247 406 8.4E-29 T 11-10-2018 IPR000160 GGDEF domain AL543_07085 f1daf76e21c95cf5bcc49096c604006d 430 Gene3D G3DSA:3.30.70.270 244 418 2.4E-40 T 11-10-2018 AL543_07085 f1daf76e21c95cf5bcc49096c604006d 430 Pfam PF00990 Diguanylate cyclase, GGDEF domain 248 403 2.7E-33 T 11-10-2018 IPR000160 GGDEF domain AL543_07085 f1daf76e21c95cf5bcc49096c604006d 430 Gene3D G3DSA:1.20.1480.50 134 234 1.0E-5 T 11-10-2018 AL543_07085 f1daf76e21c95cf5bcc49096c604006d 430 SUPERFAMILY SSF55073 253 410 1.33E-34 T 11-10-2018 IPR029787 Nucleotide cyclase AL543_04660 f4476fce24f71f5bc004b16134588392 468 Hamap MF_01128 H(+)/Cl(-) exchange transporter ClcA [clcA]. 1 467 49.275 T 11-10-2018 IPR023861 Chloride channel, ClcA GO:0005887|GO:0006821|GO:0015108 AL543_04660 f4476fce24f71f5bc004b16134588392 468 SUPERFAMILY SSF81340 25 451 2.22E-115 T 11-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 AL543_04660 f4476fce24f71f5bc004b16134588392 468 Pfam PF00654 Voltage gated chloride channel 87 435 4.7E-95 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AL543_04660 f4476fce24f71f5bc004b16134588392 468 PRINTS PR00762 Chloride channel signature 403 422 1.9E-29 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AL543_04660 f4476fce24f71f5bc004b16134588392 468 PRINTS PR00762 Chloride channel signature 181 200 1.9E-29 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AL543_04660 f4476fce24f71f5bc004b16134588392 468 PRINTS PR00762 Chloride channel signature 350 370 1.9E-29 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AL543_04660 f4476fce24f71f5bc004b16134588392 468 PRINTS PR00762 Chloride channel signature 100 117 1.9E-29 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AL543_04660 f4476fce24f71f5bc004b16134588392 468 PRINTS PR00762 Chloride channel signature 385 401 1.9E-29 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AL543_04660 f4476fce24f71f5bc004b16134588392 468 Gene3D G3DSA:1.10.3080.10 15 459 4.1E-144 T 11-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 AL543_17660 c00f3a9a3d0e704062e43348355f9a14 189 SUPERFAMILY SSF48150 8 187 1.33E-75 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AL543_17660 c00f3a9a3d0e704062e43348355f9a14 189 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 9 184 4.9E-70 T 11-10-2018 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 AL543_17660 c00f3a9a3d0e704062e43348355f9a14 189 Gene3D G3DSA:1.10.340.30 6 189 7.5E-79 T 11-10-2018 AL543_17660 c00f3a9a3d0e704062e43348355f9a14 189 Pfam PF03352 Methyladenine glycosylase 11 185 3.8E-75 T 11-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 AL543_04675 c455702f08e7622a4e31d9a39e25f3c2 389 SUPERFAMILY SSF53383 4 382 3.06E-74 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL543_04675 c455702f08e7622a4e31d9a39e25f3c2 389 Gene3D G3DSA:3.90.1150.10 16 377 3.2E-151 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL543_04675 c455702f08e7622a4e31d9a39e25f3c2 389 Gene3D G3DSA:3.40.640.10 55 286 3.2E-151 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL543_04675 c455702f08e7622a4e31d9a39e25f3c2 389 Pfam PF00155 Aminotransferase class I and II 42 375 3.8E-30 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL543_16425 96a049024bee1c0c88fbab8079e69187 267 Gene3D G3DSA:3.20.20.60 3 261 3.0E-89 T 11-10-2018 AL543_16425 96a049024bee1c0c88fbab8079e69187 267 SUPERFAMILY SSF51621 1 253 1.76E-76 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AL543_16425 96a049024bee1c0c88fbab8079e69187 267 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 19 241 3.9E-50 T 11-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 AL543_16425 96a049024bee1c0c88fbab8079e69187 267 TIGRFAM TIGR02311 HpaI: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 5 253 9.5E-125 T 11-10-2018 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase GO:0010124|GO:0018802 KEGG: 00350+4.1.2.52 AL543_17915 5dd7530ead1259117b63624c352d2537 229 Pfam PF09335 SNARE associated Golgi protein 65 181 2.5E-23 T 11-10-2018 IPR032816 SNARE associated Golgi protein AL543_17150 14263fe49cadbe17495d9ede7a654230 487 SUPERFAMILY SSF101960 38 484 3.4E-135 T 11-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily AL543_17150 14263fe49cadbe17495d9ede7a654230 487 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 17 478 7.7E-194 T 11-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 AL543_17150 14263fe49cadbe17495d9ede7a654230 487 Pfam PF01458 Uncharacterized protein family (UPF0051) 225 458 3.0E-68 T 11-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 AL543_09300 1df551d7e8320b41a1b43325a3e1e5e6 285 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 74 4.0E-15 T 11-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AL543_09300 1df551d7e8320b41a1b43325a3e1e5e6 285 Pfam PF01380 SIS domain 127 251 3.1E-16 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL543_09300 1df551d7e8320b41a1b43325a3e1e5e6 285 Gene3D G3DSA:3.40.50.10490 97 276 7.1E-39 T 11-10-2018 AL543_09300 1df551d7e8320b41a1b43325a3e1e5e6 285 SUPERFAMILY SSF46689 1 74 1.97E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_09300 1df551d7e8320b41a1b43325a3e1e5e6 285 Gene3D G3DSA:1.10.10.10 1 74 1.4E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_09300 1df551d7e8320b41a1b43325a3e1e5e6 285 SUPERFAMILY SSF53697 99 269 4.45E-32 T 11-10-2018 AL543_14125 338f6499fcc1251bf1fc3fa3c19fb9c8 308 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 37.183 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AL543_14125 338f6499fcc1251bf1fc3fa3c19fb9c8 308 Gene3D G3DSA:3.90.226.10 25 284 1.2E-82 T 11-10-2018 AL543_14125 338f6499fcc1251bf1fc3fa3c19fb9c8 308 SUPERFAMILY SSF52096 25 280 8.08E-85 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AL543_14125 338f6499fcc1251bf1fc3fa3c19fb9c8 308 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 283 4.6E-138 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AL543_14125 338f6499fcc1251bf1fc3fa3c19fb9c8 308 Pfam PF01039 Carboxyl transferase domain 102 240 2.0E-12 T 11-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 AL543_14125 338f6499fcc1251bf1fc3fa3c19fb9c8 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 1.6E-38 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AL543_14125 338f6499fcc1251bf1fc3fa3c19fb9c8 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 1.6E-38 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AL543_14125 338f6499fcc1251bf1fc3fa3c19fb9c8 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 1.6E-38 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AL543_14125 338f6499fcc1251bf1fc3fa3c19fb9c8 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 1.6E-38 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AL543_14125 338f6499fcc1251bf1fc3fa3c19fb9c8 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 1.6E-38 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AL543_15320 6185afce517fdd6db5910a8596300062 565 Gene3D G3DSA:3.40.1770.10 22 544 3.9E-257 T 11-10-2018 AL543_15320 6185afce517fdd6db5910a8596300062 565 Pfam PF17391 Urocanase N-terminal domain 17 143 6.5E-63 T 11-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL543_15320 6185afce517fdd6db5910a8596300062 565 PIRSF PIRSF001423 1 563 1.1E-294 T 11-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL543_15320 6185afce517fdd6db5910a8596300062 565 Hamap MF_00577 Urocanate hydratase [hutU]. 2 558 49.455 T 11-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL543_15320 6185afce517fdd6db5910a8596300062 565 Pfam PF01175 Urocanase Rossmann-like domain 146 351 6.0E-84 T 11-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL543_15320 6185afce517fdd6db5910a8596300062 565 Gene3D G3DSA:3.40.50.10730 147 351 3.9E-257 T 11-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL543_15320 6185afce517fdd6db5910a8596300062 565 Pfam PF17392 Urocanase C-terminal domain 354 548 2.7E-91 T 11-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL543_15320 6185afce517fdd6db5910a8596300062 565 TIGRFAM TIGR01228 hutU: urocanate hydratase 15 556 6.7E-293 T 11-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL543_15320 6185afce517fdd6db5910a8596300062 565 ProSitePatterns PS01233 Urocanase signature. 444 459 - T 11-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL543_15320 6185afce517fdd6db5910a8596300062 565 SUPERFAMILY SSF111326 11 557 1.44E-259 T 11-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL543_01270 97de46e286e2ecf237cff819b99bb508 210 SUPERFAMILY SSF48452 54 181 9.1E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_01270 97de46e286e2ecf237cff819b99bb508 210 Gene3D G3DSA:1.25.40.10 91 209 6.3E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_01270 97de46e286e2ecf237cff819b99bb508 210 Pfam PF14559 Tetratricopeptide repeat 136 185 7.4E-7 T 11-10-2018 AL543_08850 72c2b423eb7531aa8a5d8d7ecf7182c7 408 PIRSF PIRSF003180 1 408 2.2E-178 T 11-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing AL543_08850 72c2b423eb7531aa8a5d8d7ecf7182c7 408 Gene3D G3DSA:1.10.3210.10 203 400 4.7E-22 T 11-10-2018 AL543_08850 72c2b423eb7531aa8a5d8d7ecf7182c7 408 Pfam PF08668 HDOD domain 208 324 1.4E-13 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD AL543_08850 72c2b423eb7531aa8a5d8d7ecf7182c7 408 SUPERFAMILY SSF141868 5 199 1.12E-27 T 11-10-2018 IPR035919 EAL domain superfamily AL543_08850 72c2b423eb7531aa8a5d8d7ecf7182c7 408 SUPERFAMILY SSF109604 185 404 1.6E-42 T 11-10-2018 AL543_08850 72c2b423eb7531aa8a5d8d7ecf7182c7 408 Gene3D G3DSA:3.20.20.450 2 202 1.6E-17 T 11-10-2018 IPR035919 EAL domain superfamily AL543_08850 72c2b423eb7531aa8a5d8d7ecf7182c7 408 Pfam PF00563 EAL domain 74 194 3.1E-13 T 11-10-2018 IPR001633 EAL domain AL543_07080 cad4ad363b39681b1ae256495ec6c495 927 Pfam PF01627 Hpt domain 838 918 4.6E-10 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AL543_07080 cad4ad363b39681b1ae256495ec6c495 927 SMART SM00073 825 923 0.0018 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AL543_07080 cad4ad363b39681b1ae256495ec6c495 927 SUPERFAMILY SSF47384 275 356 1.59E-22 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL543_07080 cad4ad363b39681b1ae256495ec6c495 927 Gene3D G3DSA:1.20.120.160 812 927 3.8E-28 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AL543_07080 cad4ad363b39681b1ae256495ec6c495 927 Gene3D G3DSA:3.40.50.2300 666 796 3.4E-38 T 11-10-2018 AL543_07080 cad4ad363b39681b1ae256495ec6c495 927 SMART SM00387 402 518 1.4E-37 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_07080 cad4ad363b39681b1ae256495ec6c495 927 SMART SM00388 290 355 4.9E-24 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_07080 cad4ad363b39681b1ae256495ec6c495 927 Pfam PF00512 His Kinase A (phospho-acceptor) domain 291 355 4.0E-20 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_07080 cad4ad363b39681b1ae256495ec6c495 927 SUPERFAMILY SSF52172 533 645 1.22E-5 T 11-10-2018 IPR011006 CheY-like superfamily AL543_07080 cad4ad363b39681b1ae256495ec6c495 927 Gene3D G3DSA:1.10.287.130 277 356 8.8E-27 T 11-10-2018 AL543_07080 cad4ad363b39681b1ae256495ec6c495 927 SMART SM00448 665 778 2.9E-34 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_07080 cad4ad363b39681b1ae256495ec6c495 927 SUPERFAMILY SSF47226 761 918 8.11E-18 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AL543_07080 cad4ad363b39681b1ae256495ec6c495 927 SUPERFAMILY SSF52172 665 786 3.7E-36 T 11-10-2018 IPR011006 CheY-like superfamily AL543_07080 cad4ad363b39681b1ae256495ec6c495 927 PRINTS PR00344 Bacterial sensor protein C-terminal signature 502 515 2.1E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_07080 cad4ad363b39681b1ae256495ec6c495 927 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 457 2.1E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_07080 cad4ad363b39681b1ae256495ec6c495 927 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 496 2.1E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_07080 cad4ad363b39681b1ae256495ec6c495 927 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 471 2.1E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_07080 cad4ad363b39681b1ae256495ec6c495 927 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 32 175 3.0E-52 T 11-10-2018 IPR019247 Histidine kinase BarA, N-terminal AL543_07080 cad4ad363b39681b1ae256495ec6c495 927 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 402 517 1.4E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_07080 cad4ad363b39681b1ae256495ec6c495 927 SMART SM00304 198 250 5.3E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_07080 cad4ad363b39681b1ae256495ec6c495 927 Pfam PF00072 Response regulator receiver domain 667 776 3.1E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_07080 cad4ad363b39681b1ae256495ec6c495 927 SUPERFAMILY SSF158472 200 247 1.44E-6 T 11-10-2018 AL543_07080 cad4ad363b39681b1ae256495ec6c495 927 Gene3D G3DSA:1.20.1480.50 164 270 3.8E-8 T 11-10-2018 AL543_07080 cad4ad363b39681b1ae256495ec6c495 927 SUPERFAMILY SSF55874 344 517 1.83E-44 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_07080 cad4ad363b39681b1ae256495ec6c495 927 Gene3D G3DSA:3.30.565.10 357 520 1.0E-50 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_11760 aa68602689b7780b73c10b9714e86f59 158 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 36 51 - T 11-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AL543_11760 aa68602689b7780b73c10b9714e86f59 158 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 2 157 35.596 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AL543_11760 aa68602689b7780b73c10b9714e86f59 158 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3 157 5.8E-69 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AL543_11760 aa68602689b7780b73c10b9714e86f59 158 SUPERFAMILY SSF69765 1 157 1.15E-65 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AL543_11760 aa68602689b7780b73c10b9714e86f59 158 Pfam PF02542 YgbB family 2 155 2.0E-65 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AL543_11760 aa68602689b7780b73c10b9714e86f59 158 Gene3D G3DSA:3.30.1330.50 1 158 7.5E-70 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AL543_03235 8bb9e96716b02de4911e5c2ad778ee9c 243 SMART SM00079 22 243 0.0019 T 11-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AL543_03235 8bb9e96716b02de4911e5c2ad778ee9c 243 Gene3D G3DSA:3.40.190.10 109 201 2.1E-75 T 11-10-2018 AL543_03235 8bb9e96716b02de4911e5c2ad778ee9c 243 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 11-10-2018 IPR018313 Solute-binding protein family 3, conserved site AL543_03235 8bb9e96716b02de4911e5c2ad778ee9c 243 Gene3D G3DSA:3.40.190.10 27 240 2.1E-75 T 11-10-2018 AL543_03235 8bb9e96716b02de4911e5c2ad778ee9c 243 SUPERFAMILY SSF53850 1 242 1.11E-67 T 11-10-2018 AL543_03235 8bb9e96716b02de4911e5c2ad778ee9c 243 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 241 2.5E-78 T 11-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 AL543_03235 8bb9e96716b02de4911e5c2ad778ee9c 243 SMART SM00062 22 243 6.6E-72 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL543_03235 8bb9e96716b02de4911e5c2ad778ee9c 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 243 1.2E-64 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL543_03295 b3d68b45ea618e178abb703037a3e0a6 135 ProDom PD075772 YGBA ECS3588 CYTOPLASMIC UVRA STM2860 AMIDOPHOSPHORIBOSYLTRANSFERASE VVA0912 SO0324 VPA0976 CPE0229 16 104 2.0E-36 T 11-10-2018 IPR020483 Uncharacterised protein family YgbA AL543_03295 b3d68b45ea618e178abb703037a3e0a6 135 Pfam PF11756 Nitrous oxide-stimulated promoter 14 114 5.9E-44 T 11-10-2018 IPR020483 Uncharacterised protein family YgbA AL543_03665 bf2110635d1b8bd0961c0456d47aaa00 444 PRINTS PR00811 Bacterial general secretion pathway protein D signature 189 199 3.6E-7 T 11-10-2018 IPR001775 GspD/PilQ family AL543_03665 bf2110635d1b8bd0961c0456d47aaa00 444 PRINTS PR00811 Bacterial general secretion pathway protein D signature 364 382 3.6E-7 T 11-10-2018 IPR001775 GspD/PilQ family AL543_03665 bf2110635d1b8bd0961c0456d47aaa00 444 PRINTS PR01032 Gene IV protein signature 213 236 3.1E-5 T 11-10-2018 AL543_03665 bf2110635d1b8bd0961c0456d47aaa00 444 PRINTS PR01032 Gene IV protein signature 380 402 3.1E-5 T 11-10-2018 AL543_03665 bf2110635d1b8bd0961c0456d47aaa00 444 PRINTS PR01032 Gene IV protein signature 327 355 3.1E-5 T 11-10-2018 AL543_03665 bf2110635d1b8bd0961c0456d47aaa00 444 Pfam PF00263 Bacterial type II and III secretion system protein 246 399 9.0E-41 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 AL543_03665 bf2110635d1b8bd0961c0456d47aaa00 444 Pfam PF13629 Pilus formation protein N terminal region 26 93 4.0E-18 T 11-10-2018 IPR032789 Pilus formation protein, N-terminal AL543_21250 3ef1cc904f964a06674cfff3e4200cf5 77 Pfam PF12493 Protein of unknown function (DUF3709) 34 66 7.4E-22 T 11-10-2018 IPR022178 Protein of unknown function DUF3709 AL543_21190 3ef1cc904f964a06674cfff3e4200cf5 77 Pfam PF12493 Protein of unknown function (DUF3709) 34 66 7.4E-22 T 11-10-2018 IPR022178 Protein of unknown function DUF3709 AL543_21170 3ef1cc904f964a06674cfff3e4200cf5 77 Pfam PF12493 Protein of unknown function (DUF3709) 34 66 7.4E-22 T 11-10-2018 IPR022178 Protein of unknown function DUF3709 AL543_20780 3ef1cc904f964a06674cfff3e4200cf5 77 Pfam PF12493 Protein of unknown function (DUF3709) 34 66 7.4E-22 T 11-10-2018 IPR022178 Protein of unknown function DUF3709 AL543_17510 61c942414ac404fc29ac1317a0ea53df 1024 SUPERFAMILY SSF82693 145 329 7.67E-16 T 11-10-2018 AL543_17510 61c942414ac404fc29ac1317a0ea53df 1024 Gene3D G3DSA:3.30.70.1320 137 332 3.0E-262 T 11-10-2018 AL543_17510 61c942414ac404fc29ac1317a0ea53df 1024 SUPERFAMILY SSF82714 706 788 9.02E-10 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL543_17510 61c942414ac404fc29ac1317a0ea53df 1024 SUPERFAMILY SSF82693 46 132 7.32E-7 T 11-10-2018 AL543_17510 61c942414ac404fc29ac1317a0ea53df 1024 SUPERFAMILY SSF82866 297 496 1.44E-49 T 11-10-2018 AL543_17510 61c942414ac404fc29ac1317a0ea53df 1024 Gene3D G3DSA:1.20.1640.10 508 1005 3.0E-262 T 11-10-2018 AL543_17510 61c942414ac404fc29ac1317a0ea53df 1024 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.6E-63 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_17510 61c942414ac404fc29ac1317a0ea53df 1024 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 1.6E-63 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_17510 61c942414ac404fc29ac1317a0ea53df 1024 PRINTS PR00702 Acriflavin resistance protein family signature 606 620 1.6E-63 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_17510 61c942414ac404fc29ac1317a0ea53df 1024 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 1.6E-63 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_17510 61c942414ac404fc29ac1317a0ea53df 1024 PRINTS PR00702 Acriflavin resistance protein family signature 469 492 1.6E-63 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_17510 61c942414ac404fc29ac1317a0ea53df 1024 PRINTS PR00702 Acriflavin resistance protein family signature 547 564 1.6E-63 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_17510 61c942414ac404fc29ac1317a0ea53df 1024 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.6E-63 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_17510 61c942414ac404fc29ac1317a0ea53df 1024 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 1.6E-63 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_17510 61c942414ac404fc29ac1317a0ea53df 1024 PRINTS PR00702 Acriflavin resistance protein family signature 444 467 1.6E-63 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_17510 61c942414ac404fc29ac1317a0ea53df 1024 SUPERFAMILY SSF82714 189 270 9.02E-17 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL543_17510 61c942414ac404fc29ac1317a0ea53df 1024 SUPERFAMILY SSF82866 794 1012 1.06E-44 T 11-10-2018 AL543_17510 61c942414ac404fc29ac1317a0ea53df 1024 Gene3D G3DSA:3.30.2090.10 702 791 3.0E-262 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL543_17510 61c942414ac404fc29ac1317a0ea53df 1024 Gene3D G3DSA:3.30.2090.10 184 274 3.0E-262 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL543_17510 61c942414ac404fc29ac1317a0ea53df 1024 SUPERFAMILY SSF82693 560 634 9.42E-8 T 11-10-2018 AL543_17510 61c942414ac404fc29ac1317a0ea53df 1024 Gene3D G3DSA:3.30.70.1440 651 848 3.0E-262 T 11-10-2018 AL543_17510 61c942414ac404fc29ac1317a0ea53df 1024 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 1.2E-235 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL543_17510 61c942414ac404fc29ac1317a0ea53df 1024 Gene3D G3DSA:1.20.1640.10 10 507 3.0E-262 T 11-10-2018 AL543_17510 61c942414ac404fc29ac1317a0ea53df 1024 Gene3D G3DSA:3.30.70.1430 562 650 3.0E-262 T 11-10-2018 AL543_17510 61c942414ac404fc29ac1317a0ea53df 1024 Gene3D G3DSA:3.30.70.1430 40 799 3.0E-262 T 11-10-2018 AL543_12790 8d5037c9061ea62dde67533767df25c6 304 SUPERFAMILY SSF53474 79 302 4.75E-39 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL543_12790 8d5037c9061ea62dde67533767df25c6 304 Gene3D G3DSA:3.40.50.1820 65 302 7.5E-59 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL543_12790 8d5037c9061ea62dde67533767df25c6 304 Pfam PF01738 Dienelactone hydrolase family 92 299 1.1E-43 T 11-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 AL543_17920 b863ae72b219fd609c4884aebadffeb9 103 Pfam PF09413 Putative prokaryotic signal transducing protein 1 68 1.6E-12 T 11-10-2018 IPR018551 Domain of unknown function DUF2007 AL543_12145 9e48007b3e274a2a4fdfd7d9cbbe52b5 409 Gene3D G3DSA:1.10.3430.10 2 408 5.7E-120 T 11-10-2018 IPR029020 Ammonium/urea transporter AL543_12145 9e48007b3e274a2a4fdfd7d9cbbe52b5 409 TIGRFAM TIGR00836 amt: ammonium transporter 15 402 1.8E-103 T 11-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 AL543_12145 9e48007b3e274a2a4fdfd7d9cbbe52b5 409 Pfam PF00909 Ammonium Transporter Family 18 402 7.8E-102 T 11-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 AL543_12145 9e48007b3e274a2a4fdfd7d9cbbe52b5 409 TIGRFAM TIGR03644 marine_trans_1: probable ammonium transporter, marine subtype 12 405 7.0E-205 T 11-10-2018 IPR019879 Ammonium transporter, marine subtype AL543_12145 9e48007b3e274a2a4fdfd7d9cbbe52b5 409 SUPERFAMILY SSF111352 12 383 5.75E-106 T 11-10-2018 AL543_12145 9e48007b3e274a2a4fdfd7d9cbbe52b5 409 ProSitePatterns PS01219 Ammonium transporters signature. 163 188 - T 11-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 AL543_01650 3e27b0d09d5b9c24ed46669de508ee8f 403 SUPERFAMILY SSF103473 4 390 2.49E-54 T 11-10-2018 IPR036259 MFS transporter superfamily AL543_01650 3e27b0d09d5b9c24ed46669de508ee8f 403 Pfam PF07690 Major Facilitator Superfamily 25 203 4.9E-33 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL543_01650 3e27b0d09d5b9c24ed46669de508ee8f 403 Pfam PF07690 Major Facilitator Superfamily 225 388 6.3E-9 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL543_01650 3e27b0d09d5b9c24ed46669de508ee8f 403 Gene3D G3DSA:1.20.1720.10 14 389 1.8E-80 T 11-10-2018 AL543_07270 5c70b1d56179ec21ea267bc404fd4f84 467 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 4 467 2.0E-268 T 11-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 AL543_07270 5c70b1d56179ec21ea267bc404fd4f84 467 Gene3D G3DSA:3.30.499.20 6 288 4.5E-99 T 11-10-2018 AL543_07270 5c70b1d56179ec21ea267bc404fd4f84 467 Pfam PF00330 Aconitase family (aconitate hydratase) 9 459 7.7E-162 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AL543_07270 5c70b1d56179ec21ea267bc404fd4f84 467 PRINTS PR00415 Aconitase family signature 197 210 6.2E-51 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AL543_07270 5c70b1d56179ec21ea267bc404fd4f84 467 PRINTS PR00415 Aconitase family signature 345 356 6.2E-51 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AL543_07270 5c70b1d56179ec21ea267bc404fd4f84 467 PRINTS PR00415 Aconitase family signature 110 118 6.2E-51 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AL543_07270 5c70b1d56179ec21ea267bc404fd4f84 467 PRINTS PR00415 Aconitase family signature 135 150 6.2E-51 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AL543_07270 5c70b1d56179ec21ea267bc404fd4f84 467 PRINTS PR00415 Aconitase family signature 401 414 6.2E-51 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AL543_07270 5c70b1d56179ec21ea267bc404fd4f84 467 PRINTS PR00415 Aconitase family signature 84 97 6.2E-51 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AL543_07270 5c70b1d56179ec21ea267bc404fd4f84 467 PRINTS PR00415 Aconitase family signature 288 302 6.2E-51 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AL543_07270 5c70b1d56179ec21ea267bc404fd4f84 467 PRINTS PR00415 Aconitase family signature 121 134 6.2E-51 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AL543_07270 5c70b1d56179ec21ea267bc404fd4f84 467 PRINTS PR00415 Aconitase family signature 211 224 6.2E-51 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AL543_07270 5c70b1d56179ec21ea267bc404fd4f84 467 ProSitePatterns PS01244 Aconitase family signature 2. 401 414 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AL543_07270 5c70b1d56179ec21ea267bc404fd4f84 467 SUPERFAMILY SSF53732 5 466 2.35E-166 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 AL543_07270 5c70b1d56179ec21ea267bc404fd4f84 467 ProSitePatterns PS00450 Aconitase family signature 1. 341 357 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AL543_07270 5c70b1d56179ec21ea267bc404fd4f84 467 Gene3D G3DSA:3.30.499.10 330 467 2.2E-50 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 AL543_07270 5c70b1d56179ec21ea267bc404fd4f84 467 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 3 467 60.523 T 11-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 AL543_11105 0650226c3c3c57f55335674d6c7bd04b 373 Gene3D G3DSA:3.40.640.10 22 269 3.8E-145 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL543_11105 0650226c3c3c57f55335674d6c7bd04b 373 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 189 209 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AL543_11105 0650226c3c3c57f55335674d6c7bd04b 373 Gene3D G3DSA:3.90.1150.10 9 371 3.8E-145 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL543_11105 0650226c3c3c57f55335674d6c7bd04b 373 SUPERFAMILY SSF53383 9 372 3.3E-104 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL543_11105 0650226c3c3c57f55335674d6c7bd04b 373 PIRSF PIRSF000524 5 373 4.8E-110 T 11-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 AL543_11105 0650226c3c3c57f55335674d6c7bd04b 373 Pfam PF00266 Aminotransferase class-V 13 338 1.6E-36 T 11-10-2018 IPR000192 Aminotransferase class V domain AL543_17535 295d4f3a1b621a95380b65acd4dabec2 203 Gene3D G3DSA:3.40.50.1000 8 184 1.4E-37 T 11-10-2018 IPR023214 HAD superfamily AL543_17535 295d4f3a1b621a95380b65acd4dabec2 203 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 89 184 2.0E-11 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL543_17535 295d4f3a1b621a95380b65acd4dabec2 203 Gene3D G3DSA:1.10.150.240 20 85 1.4E-37 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AL543_17535 295d4f3a1b621a95380b65acd4dabec2 203 Pfam PF13419 Haloacid dehalogenase-like hydrolase 84 183 1.6E-10 T 11-10-2018 AL543_17535 295d4f3a1b621a95380b65acd4dabec2 203 SUPERFAMILY SSF56784 5 196 1.08E-33 T 11-10-2018 IPR036412 HAD-like superfamily AL543_02200 6048abdb8d7b91f9237102a2a917eebb 306 Gene3D G3DSA:3.40.1190.20 1 306 1.5E-106 T 11-10-2018 IPR029056 Ribokinase-like AL543_02200 6048abdb8d7b91f9237102a2a917eebb 306 SUPERFAMILY SSF53613 1 302 3.59E-86 T 11-10-2018 IPR029056 Ribokinase-like AL543_02200 6048abdb8d7b91f9237102a2a917eebb 306 Hamap MF_01987 Ribokinase [rbsK]. 2 301 26.486 T 11-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 AL543_02200 6048abdb8d7b91f9237102a2a917eebb 306 PRINTS PR00990 Ribokinase signature 217 228 2.3E-35 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AL543_02200 6048abdb8d7b91f9237102a2a917eebb 306 PRINTS PR00990 Ribokinase signature 33 52 2.3E-35 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AL543_02200 6048abdb8d7b91f9237102a2a917eebb 306 PRINTS PR00990 Ribokinase signature 173 188 2.3E-35 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AL543_02200 6048abdb8d7b91f9237102a2a917eebb 306 PRINTS PR00990 Ribokinase signature 6 27 2.3E-35 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AL543_02200 6048abdb8d7b91f9237102a2a917eebb 306 PRINTS PR00990 Ribokinase signature 105 118 2.3E-35 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AL543_02200 6048abdb8d7b91f9237102a2a917eebb 306 Pfam PF00294 pfkB family carbohydrate kinase 1 294 7.6E-75 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB AL543_02200 6048abdb8d7b91f9237102a2a917eebb 306 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 246 259 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AL543_02200 6048abdb8d7b91f9237102a2a917eebb 306 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 5 299 1.2E-110 T 11-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 AL543_03840 aecd3004056e61f05bdc04bd2767e0cf 193 Pfam PF09335 SNARE associated Golgi protein 35 152 6.8E-11 T 11-10-2018 IPR032816 SNARE associated Golgi protein AL543_11625 a7f3c226304ebf3881c71693260da3eb 341 PIRSF PIRSF000149 1 341 8.5E-125 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_11625 a7f3c226304ebf3881c71693260da3eb 341 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 1 341 65.1 T 11-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 AL543_11625 a7f3c226304ebf3881c71693260da3eb 341 Gene3D G3DSA:3.40.50.720 3 332 9.5E-128 T 11-10-2018 AL543_11625 a7f3c226304ebf3881c71693260da3eb 341 SUPERFAMILY SSF51735 2 185 4.74E-49 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_11625 a7f3c226304ebf3881c71693260da3eb 341 Gene3D G3DSA:3.30.360.10 158 322 9.5E-128 T 11-10-2018 AL543_11625 a7f3c226304ebf3881c71693260da3eb 341 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 3 332 3.7E-195 T 11-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 AL543_11625 a7f3c226304ebf3881c71693260da3eb 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 180 196 1.7E-29 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_11625 a7f3c226304ebf3881c71693260da3eb 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 236 253 1.7E-29 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_11625 a7f3c226304ebf3881c71693260da3eb 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 153 171 1.7E-29 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_11625 a7f3c226304ebf3881c71693260da3eb 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 116 129 1.7E-29 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_11625 a7f3c226304ebf3881c71693260da3eb 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 276 291 1.7E-29 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_11625 a7f3c226304ebf3881c71693260da3eb 341 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 164 320 4.9E-56 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_11625 a7f3c226304ebf3881c71693260da3eb 341 SMART SM00846 2 159 7.8E-71 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_11625 a7f3c226304ebf3881c71693260da3eb 341 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 107 5.9E-31 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL543_11625 a7f3c226304ebf3881c71693260da3eb 341 SUPERFAMILY SSF55347 159 321 1.85E-58 T 11-10-2018 AL543_08610 0924cb6879a00fb75710e33fcfe56437 98 Pfam PF13592 Winged helix-turn helix 41 97 3.7E-16 T 11-10-2018 IPR025959 Winged helix-turn helix domain AL543_08610 0924cb6879a00fb75710e33fcfe56437 98 SUPERFAMILY SSF46689 3 74 3.4E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_12610 be72d295a1b32e7dcbeec6c54ae2cbc7 122 Pfam PF07238 PilZ domain 3 100 8.0E-14 T 11-10-2018 IPR009875 PilZ domain GO:0035438 AL543_12610 be72d295a1b32e7dcbeec6c54ae2cbc7 122 SUPERFAMILY SSF141371 1 118 4.51E-32 T 11-10-2018 AL543_12610 be72d295a1b32e7dcbeec6c54ae2cbc7 122 PIRSF PIRSF028141 1 120 4.3E-37 T 11-10-2018 IPR027021 Cyclic di-GMP binding protein, PA4608 type AL543_12610 be72d295a1b32e7dcbeec6c54ae2cbc7 122 Gene3D G3DSA:2.40.10.220 1 119 3.6E-30 T 11-10-2018 AL543_12290 fc223e93a14e7604d5ad83a6d8322b73 209 Pfam PF01728 FtsJ-like methyltransferase 31 207 3.3E-56 T 11-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 AL543_12290 fc223e93a14e7604d5ad83a6d8322b73 209 SUPERFAMILY SSF53335 30 209 4.53E-46 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL543_12290 fc223e93a14e7604d5ad83a6d8322b73 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 15 208 28.422 T 11-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 AL543_12290 fc223e93a14e7604d5ad83a6d8322b73 209 PIRSF PIRSF005461 1 209 3.7E-79 T 11-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 AL543_12290 fc223e93a14e7604d5ad83a6d8322b73 209 Gene3D G3DSA:3.40.50.150 30 209 6.6E-59 T 11-10-2018 AL543_19655 5263326d881874630a72f6042dea85d8 313 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 39 279 2.1E-20 T 11-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 AL543_19655 5263326d881874630a72f6042dea85d8 313 Gene3D G3DSA:3.40.50.300 40 281 2.8E-58 T 11-10-2018 AL543_19655 5263326d881874630a72f6042dea85d8 313 PIRSF PIRSF003092 25 306 2.4E-85 T 11-10-2018 IPR025501 ATP binding protein MinD AL543_19655 5263326d881874630a72f6042dea85d8 313 SUPERFAMILY SSF52540 41 300 2.48E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_01590 9cc0e6d6a21aedc7acb92eda550a279d 273 Gene3D G3DSA:3.40.190.10 99 233 1.4E-83 T 11-10-2018 AL543_01590 9cc0e6d6a21aedc7acb92eda550a279d 273 Pfam PF12849 PBP superfamily domain 24 257 6.1E-41 T 11-10-2018 IPR024370 PBP domain AL543_01590 9cc0e6d6a21aedc7acb92eda550a279d 273 Gene3D G3DSA:3.40.190.10 30 270 1.4E-83 T 11-10-2018 AL543_01590 9cc0e6d6a21aedc7acb92eda550a279d 273 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 19 271 3.2E-77 T 11-10-2018 IPR011862 Phosphate binding protein GO:0042301 AL543_01590 9cc0e6d6a21aedc7acb92eda550a279d 273 SUPERFAMILY SSF53850 16 272 1.17E-74 T 11-10-2018 AL543_19665 0440697a3f2f869afafd0e5756b4859a 697 Gene3D G3DSA:1.10.8.540 507 594 1.9E-23 T 11-10-2018 AL543_19665 0440697a3f2f869afafd0e5756b4859a 697 Pfam PF00771 FHIPEP family 32 687 2.3E-271 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL543_19665 0440697a3f2f869afafd0e5756b4859a 697 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 11-10-2018 IPR025505 FHIPEP conserved site AL543_19665 0440697a3f2f869afafd0e5756b4859a 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 2.9E-56 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL543_19665 0440697a3f2f869afafd0e5756b4859a 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 2.9E-56 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL543_19665 0440697a3f2f869afafd0e5756b4859a 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 2.9E-56 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL543_19665 0440697a3f2f869afafd0e5756b4859a 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 2.9E-56 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL543_19665 0440697a3f2f869afafd0e5756b4859a 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 2.9E-56 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL543_19665 0440697a3f2f869afafd0e5756b4859a 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 2.9E-56 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL543_19665 0440697a3f2f869afafd0e5756b4859a 697 Gene3D G3DSA:1.10.490.80 598 695 1.2E-14 T 11-10-2018 AL543_19665 0440697a3f2f869afafd0e5756b4859a 697 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 22 694 9.7E-270 T 11-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 AL543_19665 0440697a3f2f869afafd0e5756b4859a 697 PIRSF PIRSF005419 10 697 7.0E-255 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL543_19665 0440697a3f2f869afafd0e5756b4859a 697 Gene3D G3DSA:3.40.30.60 363 506 1.7E-54 T 11-10-2018 AL543_18110 f20b30dc348871a4a21f50d3746d1f1a 488 Pfam PF13629 Pilus formation protein N terminal region 26 95 9.9E-19 T 11-10-2018 IPR032789 Pilus formation protein, N-terminal AL543_18110 f20b30dc348871a4a21f50d3746d1f1a 488 PRINTS PR00811 Bacterial general secretion pathway protein D signature 178 188 1.9E-12 T 11-10-2018 IPR001775 GspD/PilQ family AL543_18110 f20b30dc348871a4a21f50d3746d1f1a 488 PRINTS PR00811 Bacterial general secretion pathway protein D signature 254 278 1.9E-12 T 11-10-2018 IPR001775 GspD/PilQ family AL543_18110 f20b30dc348871a4a21f50d3746d1f1a 488 PRINTS PR00811 Bacterial general secretion pathway protein D signature 388 406 1.9E-12 T 11-10-2018 IPR001775 GspD/PilQ family AL543_18110 f20b30dc348871a4a21f50d3746d1f1a 488 PRINTS PR00811 Bacterial general secretion pathway protein D signature 411 425 1.9E-12 T 11-10-2018 IPR001775 GspD/PilQ family AL543_18110 f20b30dc348871a4a21f50d3746d1f1a 488 Pfam PF00263 Bacterial type II and III secretion system protein 260 422 1.4E-40 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 AL543_02300 6c8f2053bc7745e325d0d78dea44b29e 342 Gene3D G3DSA:3.40.50.2300 168 301 5.0E-74 T 11-10-2018 AL543_02300 6c8f2053bc7745e325d0d78dea44b29e 342 SUPERFAMILY SSF47413 12 70 2.06E-16 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL543_02300 6c8f2053bc7745e325d0d78dea44b29e 342 Gene3D G3DSA:3.40.50.2300 74 318 5.0E-74 T 11-10-2018 AL543_02300 6c8f2053bc7745e325d0d78dea44b29e 342 Pfam PF00356 Bacterial regulatory proteins, lacI family 14 59 5.2E-18 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL543_02300 6c8f2053bc7745e325d0d78dea44b29e 342 SMART SM00354 12 82 1.3E-26 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL543_02300 6c8f2053bc7745e325d0d78dea44b29e 342 SUPERFAMILY SSF53822 70 324 4.93E-45 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AL543_02300 6c8f2053bc7745e325d0d78dea44b29e 342 ProSitePatterns PS00356 LacI-type HTH domain signature. 15 33 - T 11-10-2018 AL543_02300 6c8f2053bc7745e325d0d78dea44b29e 342 Gene3D G3DSA:1.10.260.40 4 70 2.1E-22 T 11-10-2018 AL543_02300 6c8f2053bc7745e325d0d78dea44b29e 342 Pfam PF13377 Periplasmic binding protein-like domain 179 339 1.2E-25 T 11-10-2018 AL543_18305 28a67a900be49f02435a8f0416c83581 356 Pfam PF06519 TolA C-terminal 254 353 5.7E-34 T 11-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 AL543_18305 28a67a900be49f02435a8f0416c83581 356 Gene3D G3DSA:3.30.1150.10 254 356 1.8E-27 T 11-10-2018 AL543_18305 28a67a900be49f02435a8f0416c83581 356 SUPERFAMILY SSF74653 263 356 1.79E-14 T 11-10-2018 AL543_18305 28a67a900be49f02435a8f0416c83581 356 TIGRFAM TIGR02794 tolA_full: protein TolA 13 355 1.3E-90 T 11-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 AL543_11795 3a8474d03bdbe5f2e464ea5cf1bef10e 295 TIGRFAM TIGR01138 cysM: cysteine synthase B 6 294 6.6E-148 T 11-10-2018 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 AL543_11795 3a8474d03bdbe5f2e464ea5cf1bef10e 295 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 283 1.3E-61 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AL543_11795 3a8474d03bdbe5f2e464ea5cf1bef10e 295 Gene3D G3DSA:3.40.50.1100 37 142 6.3E-110 T 11-10-2018 AL543_11795 3a8474d03bdbe5f2e464ea5cf1bef10e 295 SUPERFAMILY SSF53686 5 290 1.83E-87 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL543_11795 3a8474d03bdbe5f2e464ea5cf1bef10e 295 Gene3D G3DSA:3.40.50.1100 11 290 6.3E-110 T 11-10-2018 AL543_11795 3a8474d03bdbe5f2e464ea5cf1bef10e 295 TIGRFAM TIGR01136 cysKM: cysteine synthase 8 294 2.0E-123 T 11-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 AL543_11795 3a8474d03bdbe5f2e464ea5cf1bef10e 295 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 32 50 - T 11-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 AL543_05640 8747abea61d1a0b4fdc865f581531dde 64 PRINTS PR00064 Ribosomal protein L35 signature 35 53 2.3E-18 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AL543_05640 8747abea61d1a0b4fdc865f581531dde 64 PRINTS PR00064 Ribosomal protein L35 signature 3 20 2.3E-18 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AL543_05640 8747abea61d1a0b4fdc865f581531dde 64 PRINTS PR00064 Ribosomal protein L35 signature 20 34 2.3E-18 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AL543_05640 8747abea61d1a0b4fdc865f581531dde 64 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 63 17.6 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AL543_05640 8747abea61d1a0b4fdc865f581531dde 64 Gene3D G3DSA:2.40.50.530 1 64 2.2E-17 T 11-10-2018 AL543_05640 8747abea61d1a0b4fdc865f581531dde 64 Pfam PF01632 Ribosomal protein L35 2 61 4.2E-20 T 11-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_05640 8747abea61d1a0b4fdc865f581531dde 64 SUPERFAMILY SSF143034 2 63 1.12E-19 T 11-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_05640 8747abea61d1a0b4fdc865f581531dde 64 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 30 - T 11-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_05640 8747abea61d1a0b4fdc865f581531dde 64 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 6.5E-26 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AL543_02765 87278d8db91f761c8d49dc8321da4b79 514 Gene3D G3DSA:3.40.50.2300 21 166 1.7E-14 T 11-10-2018 AL543_02765 87278d8db91f761c8d49dc8321da4b79 514 Pfam PF13487 HD domain 390 453 3.2E-19 T 11-10-2018 AL543_02765 87278d8db91f761c8d49dc8321da4b79 514 SMART SM00448 27 149 0.0046 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_02765 87278d8db91f761c8d49dc8321da4b79 514 Pfam PF11849 Domain of unknown function (DUF3369) 149 315 3.0E-39 T 11-10-2018 IPR021800 Domain of unknown function DUF3369 AL543_02765 87278d8db91f761c8d49dc8321da4b79 514 SUPERFAMILY SSF52172 25 157 4.7E-12 T 11-10-2018 IPR011006 CheY-like superfamily AL543_02765 87278d8db91f761c8d49dc8321da4b79 514 Pfam PF00072 Response regulator receiver domain 29 138 1.7E-5 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_02765 87278d8db91f761c8d49dc8321da4b79 514 Gene3D G3DSA:1.10.3210.10 315 514 4.7E-68 T 11-10-2018 AL543_02765 87278d8db91f761c8d49dc8321da4b79 514 SUPERFAMILY SSF109604 325 503 3.45E-37 T 11-10-2018 AL543_02765 87278d8db91f761c8d49dc8321da4b79 514 SMART SM00471 335 472 2.0E-5 T 11-10-2018 IPR003607 HD/PDEase domain AL543_01140 05fd72ab63d8298bbc2985c0db70ba91 220 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 53 163 1.0E-13 T 11-10-2018 IPR010319 Transglutaminase-like cysteine peptidase, predicted AL543_01140 05fd72ab63d8298bbc2985c0db70ba91 220 Gene3D G3DSA:3.10.620.30 21 211 3.7E-75 T 11-10-2018 AL543_19375 c5409457fcbe82eac8fe31a9aac1b431 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 2.6E-16 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain AL543_19375 c5409457fcbe82eac8fe31a9aac1b431 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 76 2.8E-37 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 AL543_19375 c5409457fcbe82eac8fe31a9aac1b431 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 11-10-2018 IPR006162 Phosphopantetheine attachment site AL543_19375 c5409457fcbe82eac8fe31a9aac1b431 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.852 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 AL543_19375 c5409457fcbe82eac8fe31a9aac1b431 78 SUPERFAMILY SSF47336 2 76 7.07E-24 T 11-10-2018 IPR036736 ACP-like superfamily AL543_19375 c5409457fcbe82eac8fe31a9aac1b431 78 Gene3D G3DSA:1.10.1200.10 1 76 2.2E-30 T 11-10-2018 IPR036736 ACP-like superfamily AL543_14245 d4996864367152742248e89bfa7ca826 170 Pfam PF00994 Probable molybdopterin binding domain 14 156 1.2E-35 T 11-10-2018 IPR001453 MoaB/Mog domain AL543_14245 d4996864367152742248e89bfa7ca826 170 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 7 168 2.0E-85 T 11-10-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 AL543_14245 d4996864367152742248e89bfa7ca826 170 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 12 152 1.1E-37 T 11-10-2018 IPR001453 MoaB/Mog domain AL543_14245 d4996864367152742248e89bfa7ca826 170 PIRSF PIRSF006443 1 166 1.3E-66 T 11-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 AL543_14245 d4996864367152742248e89bfa7ca826 170 SMART SM00852 14 158 2.8E-30 T 11-10-2018 IPR001453 MoaB/Mog domain AL543_14245 d4996864367152742248e89bfa7ca826 170 SUPERFAMILY SSF53218 7 168 2.09E-47 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily AL543_14245 d4996864367152742248e89bfa7ca826 170 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 72 85 - T 11-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 AL543_14245 d4996864367152742248e89bfa7ca826 170 Gene3D G3DSA:3.40.980.10 2 170 1.8E-53 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily AL543_03625 8fd2520406d828cd5566038ceb0e0e61 401 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 399 7.2E-148 T 11-10-2018 IPR002155 Thiolase GO:0016747 AL543_03625 8fd2520406d828cd5566038ceb0e0e61 401 Gene3D G3DSA:3.40.47.10 126 398 2.8E-146 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL543_03625 8fd2520406d828cd5566038ceb0e0e61 401 Pfam PF02803 Thiolase, C-terminal domain 271 399 4.8E-44 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AL543_03625 8fd2520406d828cd5566038ceb0e0e61 401 SUPERFAMILY SSF53901 271 399 8.06E-37 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL543_03625 8fd2520406d828cd5566038ceb0e0e61 401 PIRSF PIRSF000429 1 401 4.5E-124 T 11-10-2018 IPR002155 Thiolase GO:0016747 AL543_03625 8fd2520406d828cd5566038ceb0e0e61 401 SUPERFAMILY SSF53901 4 270 5.76E-80 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL543_03625 8fd2520406d828cd5566038ceb0e0e61 401 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 AL543_03625 8fd2520406d828cd5566038ceb0e0e61 401 Pfam PF00108 Thiolase, N-terminal domain 4 263 5.2E-95 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 AL543_03625 8fd2520406d828cd5566038ceb0e0e61 401 Gene3D G3DSA:3.40.47.10 6 276 2.8E-146 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL543_03625 8fd2520406d828cd5566038ceb0e0e61 401 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 11-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 AL543_03625 8fd2520406d828cd5566038ceb0e0e61 401 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 AL543_06475 ca57d48f7278daef4e6897c4ec59c441 114 Pfam PF01588 Putative tRNA binding domain 18 111 1.6E-21 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 AL543_06475 ca57d48f7278daef4e6897c4ec59c441 114 SUPERFAMILY SSF50249 11 113 1.62E-25 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL543_06475 ca57d48f7278daef4e6897c4ec59c441 114 Gene3D G3DSA:2.40.50.140 6 114 2.5E-30 T 11-10-2018 AL543_04110 65d65c83a416e5716007d69de344b720 465 Pfam PF00202 Aminotransferase class-III 62 454 1.9E-86 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL543_04110 65d65c83a416e5716007d69de344b720 465 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 270 307 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL543_04110 65d65c83a416e5716007d69de344b720 465 Gene3D G3DSA:3.40.640.10 94 353 3.4E-121 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL543_04110 65d65c83a416e5716007d69de344b720 465 Gene3D G3DSA:3.90.1150.10 66 449 3.4E-121 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL543_04110 65d65c83a416e5716007d69de344b720 465 PIRSF PIRSF000521 32 161 5.9E-4 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL543_04110 65d65c83a416e5716007d69de344b720 465 PIRSF PIRSF000521 154 457 4.4E-21 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL543_04110 65d65c83a416e5716007d69de344b720 465 SUPERFAMILY SSF53383 62 454 7.92E-106 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL543_11190 e24e53555f5262c3208e74fc5136a0ed 159 Gene3D G3DSA:3.30.700.10 7 159 1.0E-14 T 11-10-2018 AL543_11190 e24e53555f5262c3208e74fc5136a0ed 159 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 2.1E-9 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL543_11190 e24e53555f5262c3208e74fc5136a0ed 159 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL543_11190 e24e53555f5262c3208e74fc5136a0ed 159 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 7.6E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL543_11190 e24e53555f5262c3208e74fc5136a0ed 159 SUPERFAMILY SSF54523 7 50 3.61E-12 T 11-10-2018 AL543_08370 575a81fb68c300ae306f7717b8522827 705 Gene3D G3DSA:1.10.3210.10 3 190 1.7E-79 T 11-10-2018 AL543_08370 575a81fb68c300ae306f7717b8522827 705 Pfam PF13291 ACT domain 626 702 1.4E-14 T 11-10-2018 IPR002912 ACT domain AL543_08370 575a81fb68c300ae306f7717b8522827 705 Pfam PF13328 HD domain 28 175 2.3E-53 T 11-10-2018 IPR003607 HD/PDEase domain AL543_08370 575a81fb68c300ae306f7717b8522827 705 Gene3D G3DSA:3.30.460.10 193 325 8.8E-46 T 11-10-2018 AL543_08370 575a81fb68c300ae306f7717b8522827 705 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 1.2E-34 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 AL543_08370 575a81fb68c300ae306f7717b8522827 705 Gene3D G3DSA:3.30.70.260 626 705 5.6E-14 T 11-10-2018 AL543_08370 575a81fb68c300ae306f7717b8522827 705 SUPERFAMILY SSF109604 3 190 2.32E-74 T 11-10-2018 AL543_08370 575a81fb68c300ae306f7717b8522827 705 SUPERFAMILY SSF55021 630 702 1.95E-8 T 11-10-2018 AL543_08370 575a81fb68c300ae306f7717b8522827 705 SUPERFAMILY SSF81301 180 393 4.58E-59 T 11-10-2018 AL543_08370 575a81fb68c300ae306f7717b8522827 705 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 27 702 1.2E-271 T 11-10-2018 IPR004811 RelA/SpoT family GO:0015969 AL543_08370 575a81fb68c300ae306f7717b8522827 705 SUPERFAMILY SSF81271 376 448 1.05E-20 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AL543_08370 575a81fb68c300ae306f7717b8522827 705 SMART SM00471 41 153 3.0E-11 T 11-10-2018 IPR003607 HD/PDEase domain AL543_08370 575a81fb68c300ae306f7717b8522827 705 Pfam PF02824 TGS domain 389 447 2.3E-19 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 AL543_08370 575a81fb68c300ae306f7717b8522827 705 SMART SM00954 235 345 6.9E-57 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 AL543_08370 575a81fb68c300ae306f7717b8522827 705 Gene3D G3DSA:3.10.20.30 382 456 5.4E-29 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AL543_18545 ff6c6c6bdfd6307710e9987f0ad1058a 752 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 137 718 4.7E-130 T 11-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 AL543_18545 ff6c6c6bdfd6307710e9987f0ad1058a 752 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 235 407 1.2E-25 T 11-10-2018 IPR004477 ComEC/Rec2-related protein AL543_18545 ff6c6c6bdfd6307710e9987f0ad1058a 752 SMART SM00849 506 689 6.5E-10 T 11-10-2018 IPR001279 Metallo-beta-lactamase AL543_18545 ff6c6c6bdfd6307710e9987f0ad1058a 752 Gene3D G3DSA:3.60.15.10 497 732 6.0E-48 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AL543_18545 ff6c6c6bdfd6307710e9987f0ad1058a 752 SUPERFAMILY SSF56281 497 731 2.03E-45 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AL543_18545 ff6c6c6bdfd6307710e9987f0ad1058a 752 Pfam PF13567 Domain of unknown function (DUF4131) 29 177 7.8E-9 T 11-10-2018 IPR025405 Domain of unknown function DUF4131 AL543_18545 ff6c6c6bdfd6307710e9987f0ad1058a 752 Pfam PF03772 Competence protein 213 469 1.1E-56 T 11-10-2018 IPR004477 ComEC/Rec2-related protein AL543_18545 ff6c6c6bdfd6307710e9987f0ad1058a 752 Pfam PF00753 Metallo-beta-lactamase superfamily 504 680 1.4E-14 T 11-10-2018 IPR001279 Metallo-beta-lactamase AL543_10300 77ad8581ea456ec73010377e51caa40e 314 Gene3D G3DSA:3.40.50.720 3 307 1.1E-113 T 11-10-2018 AL543_10300 77ad8581ea456ec73010377e51caa40e 314 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 241 2.7E-46 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AL543_10300 77ad8581ea456ec73010377e51caa40e 314 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 314 47.461 T 11-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 AL543_10300 77ad8581ea456ec73010377e51caa40e 314 SUPERFAMILY SSF51735 1 308 1.0E-58 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_10300 77ad8581ea456ec73010377e51caa40e 314 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 313 1.4E-125 T 11-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 AL543_10300 77ad8581ea456ec73010377e51caa40e 314 Gene3D G3DSA:3.90.25.10 173 295 1.1E-113 T 11-10-2018 AL543_07190 5e02b7a573f809d6f21f529b61ab721b 402 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 16 398 5.8E-158 T 11-10-2018 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 AL543_07190 5e02b7a573f809d6f21f529b61ab721b 402 Gene3D G3DSA:3.30.9.50 92 281 1.1E-96 T 11-10-2018 AL543_07190 5e02b7a573f809d6f21f529b61ab721b 402 Gene3D G3DSA:3.50.50.60 16 346 1.1E-96 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_07190 5e02b7a573f809d6f21f529b61ab721b 402 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 16 397 2.5E-124 T 11-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 AL543_07190 5e02b7a573f809d6f21f529b61ab721b 402 SUPERFAMILY SSF51905 15 392 1.35E-55 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_07190 5e02b7a573f809d6f21f529b61ab721b 402 Pfam PF01494 FAD binding domain 15 347 1.7E-22 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 AL543_07190 5e02b7a573f809d6f21f529b61ab721b 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 16 38 5.3E-11 T 11-10-2018 AL543_07190 5e02b7a573f809d6f21f529b61ab721b 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 292 307 5.3E-11 T 11-10-2018 AL543_07190 5e02b7a573f809d6f21f529b61ab721b 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 168 183 5.3E-11 T 11-10-2018 AL543_07190 5e02b7a573f809d6f21f529b61ab721b 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 307 323 5.3E-11 T 11-10-2018 AL543_07190 5e02b7a573f809d6f21f529b61ab721b 402 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 306 319 - T 11-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 AL543_05275 447163b0e8f30ef509421848b29fa106 279 Pfam PF10899 Putative abortive phage resistance protein AbiGi, antitoxin 56 238 1.4E-48 T 11-10-2018 IPR021223 Abortive phage resistance protein AbiGi AL543_03910 dbfc3c63f089c4786c8f78cf6bdb331b 139 Pfam PF04143 Sulphur transport 3 129 6.8E-11 T 11-10-2018 IPR007272 Sulphur transport domain AL543_14760 09ab6ef869488de71a08d7839ab25f26 270 Gene3D G3DSA:3.40.190.10 23 234 2.5E-36 T 11-10-2018 AL543_14760 09ab6ef869488de71a08d7839ab25f26 270 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 23 253 4.6E-52 T 11-10-2018 AL543_14760 09ab6ef869488de71a08d7839ab25f26 270 SUPERFAMILY SSF53850 21 267 1.19E-29 T 11-10-2018 AL543_14760 09ab6ef869488de71a08d7839ab25f26 270 Gene3D G3DSA:3.40.190.10 102 202 2.5E-36 T 11-10-2018 AL543_15955 09f8fdd94abae05acb5a92c15c7cbae6 233 SMART SM00448 5 115 3.3E-38 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_15955 09f8fdd94abae05acb5a92c15c7cbae6 233 SUPERFAMILY SSF52172 3 128 1.04E-35 T 11-10-2018 IPR011006 CheY-like superfamily AL543_15955 09f8fdd94abae05acb5a92c15c7cbae6 233 SMART SM00862 152 228 7.3E-20 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL543_15955 09f8fdd94abae05acb5a92c15c7cbae6 233 Gene3D G3DSA:3.40.50.2300 1 119 1.3E-31 T 11-10-2018 AL543_15955 09f8fdd94abae05acb5a92c15c7cbae6 233 Pfam PF00072 Response regulator receiver domain 8 116 1.5E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_15955 09f8fdd94abae05acb5a92c15c7cbae6 233 Gene3D G3DSA:1.10.10.10 120 233 6.5E-34 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_15955 09f8fdd94abae05acb5a92c15c7cbae6 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 228 9.7E-22 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL543_15955 09f8fdd94abae05acb5a92c15c7cbae6 233 SUPERFAMILY SSF46894 134 230 9.07E-26 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL543_08530 b149ecb44106931de1d1cb645b98f9a3 542 PIRSF PIRSF006294 4 541 2.9E-225 T 11-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AL543_08530 b149ecb44106931de1d1cb645b98f9a3 542 SUPERFAMILY SSF68923 11 228 3.31E-87 T 11-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AL543_08530 b149ecb44106931de1d1cb645b98f9a3 542 Pfam PF01293 Phosphoenolpyruvate carboxykinase 24 491 6.5E-210 T 11-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AL543_08530 b149ecb44106931de1d1cb645b98f9a3 542 Gene3D G3DSA:2.170.8.10 49 351 9.0E-235 T 11-10-2018 AL543_08530 b149ecb44106931de1d1cb645b98f9a3 542 Gene3D G3DSA:3.90.228.20 236 526 9.0E-235 T 11-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AL543_08530 b149ecb44106931de1d1cb645b98f9a3 542 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 11 541 1.0E-277 T 11-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AL543_08530 b149ecb44106931de1d1cb645b98f9a3 542 SUPERFAMILY SSF53795 230 541 4.03E-127 T 11-10-2018 AL543_08530 b149ecb44106931de1d1cb645b98f9a3 542 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 18 539 54.691 T 11-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AL543_08530 b149ecb44106931de1d1cb645b98f9a3 542 Gene3D G3DSA:3.40.449.10 25 235 9.0E-235 T 11-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AL543_08530 b149ecb44106931de1d1cb645b98f9a3 542 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 266 281 - T 11-10-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AL543_15580 35b773bd95934b0498857996ccf3bf23 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 3.4E-37 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL543_15580 35b773bd95934b0498857996ccf3bf23 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 3.4E-37 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL543_15580 35b773bd95934b0498857996ccf3bf23 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 3.4E-37 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL543_15580 35b773bd95934b0498857996ccf3bf23 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 3.4E-37 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL543_15580 35b773bd95934b0498857996ccf3bf23 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 3.4E-37 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL543_15580 35b773bd95934b0498857996ccf3bf23 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 3.4E-37 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL543_15580 35b773bd95934b0498857996ccf3bf23 760 SUPERFAMILY SSF48168 10 221 3.92E-74 T 11-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL543_15580 35b773bd95934b0498857996ccf3bf23 760 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 142 219 1.3E-11 T 11-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL543_15580 35b773bd95934b0498857996ccf3bf23 760 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL543_15580 35b773bd95934b0498857996ccf3bf23 760 Gene3D G3DSA:3.20.70.20 78 742 1.2E-155 T 11-10-2018 AL543_15580 35b773bd95934b0498857996ccf3bf23 760 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 731 4.0E-121 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL543_15580 35b773bd95934b0498857996ccf3bf23 760 SUPERFAMILY SSF51998 222 739 4.58E-167 T 11-10-2018 AL543_15580 35b773bd95934b0498857996ccf3bf23 760 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 3.0E-175 T 11-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL543_15580 35b773bd95934b0498857996ccf3bf23 760 Pfam PF03477 ATP cone domain 6 92 8.4E-19 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 AL543_04420 5cef35ba294df7d92c4332d9e62ae496 458 Gene3D G3DSA:3.40.50.1220 282 458 9.1E-89 T 11-10-2018 AL543_04420 5cef35ba294df7d92c4332d9e62ae496 458 PIRSF PIRSF000204 1 458 4.9E-235 T 11-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 AL543_04420 5cef35ba294df7d92c4332d9e62ae496 458 SUPERFAMILY SSF52467 285 458 1.55E-79 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AL543_04420 5cef35ba294df7d92c4332d9e62ae496 458 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 456 2.6E-201 T 11-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AL543_11995 de8d52f4b6d11b1db6381760fadb44c8 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 11-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 AL543_11995 de8d52f4b6d11b1db6381760fadb44c8 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 7.3E-46 T 11-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 AL543_11995 de8d52f4b6d11b1db6381760fadb44c8 130 Gene3D G3DSA:3.30.230.10 1 130 4.1E-53 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL543_11995 de8d52f4b6d11b1db6381760fadb44c8 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.585 T 11-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid AL543_11995 de8d52f4b6d11b1db6381760fadb44c8 130 SUPERFAMILY SSF54211 5 130 2.31E-48 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL543_11990 0e35b50f6fd164376810411c48719004 142 Pfam PF00572 Ribosomal protein L13 15 138 2.0E-57 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AL543_11990 0e35b50f6fd164376810411c48719004 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 2.6E-65 T 11-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_11990 0e35b50f6fd164376810411c48719004 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 11-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 AL543_11990 0e35b50f6fd164376810411c48719004 142 SUPERFAMILY SSF52161 1 140 7.85E-61 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 AL543_11990 0e35b50f6fd164376810411c48719004 142 PIRSF PIRSF002181 1 142 1.9E-52 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AL543_11990 0e35b50f6fd164376810411c48719004 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.831 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AL543_11990 0e35b50f6fd164376810411c48719004 142 Gene3D G3DSA:3.90.1180.10 1 142 3.4E-64 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 AL543_18200 5e89886be75ed51bda3f7708dfc25c7c 895 Gene3D G3DSA:2.70.98.10 53 421 3.7E-201 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AL543_18200 5e89886be75ed51bda3f7708dfc25c7c 895 Gene3D G3DSA:1.20.1610.10 538 737 3.7E-201 T 11-10-2018 AL543_18200 5e89886be75ed51bda3f7708dfc25c7c 895 SUPERFAMILY SSF48208 313 841 9.18E-12 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AL543_18200 5e89886be75ed51bda3f7708dfc25c7c 895 Gene3D G3DSA:1.20.1050.60 422 537 3.7E-201 T 11-10-2018 AL543_18200 5e89886be75ed51bda3f7708dfc25c7c 895 Pfam PF07971 Glycosyl hydrolase family 92 278 862 7.1E-127 T 11-10-2018 IPR012939 Glycosyl hydrolase family 92 AL543_18200 5e89886be75ed51bda3f7708dfc25c7c 895 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 398 865 1.5E-94 T 11-10-2018 IPR005887 Alpha-1,2-mannosidase, putative AL543_18200 5e89886be75ed51bda3f7708dfc25c7c 895 Gene3D G3DSA:3.30.2080.10 341 865 3.7E-201 T 11-10-2018 AL543_08690 92ab21dabd7b26ee29cb983733bd1014 613 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 148 5.6E-30 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AL543_08690 92ab21dabd7b26ee29cb983733bd1014 613 Gene3D G3DSA:2.170.130.10 24 153 3.9E-36 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AL543_08690 92ab21dabd7b26ee29cb983733bd1014 613 Gene3D G3DSA:2.40.170.20 156 613 1.6E-103 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AL543_08690 92ab21dabd7b26ee29cb983733bd1014 613 Hamap MF_01531 Vitamin B12 transporter BtuB [btuB]. 2 613 32.83 T 11-10-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0015420|GO:0015889|GO:0016020 AL543_08690 92ab21dabd7b26ee29cb983733bd1014 613 SUPERFAMILY SSF56935 29 613 1.61E-116 T 11-10-2018 AL543_08690 92ab21dabd7b26ee29cb983733bd1014 613 Pfam PF00593 TonB dependent receptor 185 612 3.4E-48 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AL543_08690 92ab21dabd7b26ee29cb983733bd1014 613 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 36 - T 11-10-2018 IPR010916 TonB box, conserved site AL543_01625 09f8222f704153e96c016fdf997f19fd 554 Pfam PF00916 Sulfate permease family 20 383 5.6E-87 T 11-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AL543_01625 09f8222f704153e96c016fdf997f19fd 554 Gene3D G3DSA:3.30.750.24 423 551 1.4E-33 T 11-10-2018 IPR036513 STAS domain superfamily AL543_01625 09f8222f704153e96c016fdf997f19fd 554 SUPERFAMILY SSF52091 440 543 6.28E-18 T 11-10-2018 IPR036513 STAS domain superfamily AL543_01625 09f8222f704153e96c016fdf997f19fd 554 Pfam PF01740 STAS domain 442 537 1.1E-17 T 11-10-2018 IPR002645 STAS domain AL543_18825 1ccf10003236dcfe02020b259627ce51 179 SUPERFAMILY SSF111126 1 174 3.77E-42 T 11-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily AL543_18825 1ccf10003236dcfe02020b259627ce51 179 Pfam PF07700 Haem-NO-binding 2 158 8.3E-35 T 11-10-2018 IPR011644 Heme NO-binding GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 AL543_18825 1ccf10003236dcfe02020b259627ce51 179 Gene3D G3DSA:3.90.1520.10 1 179 1.5E-48 T 11-10-2018 IPR038158 H-NOX domain superfamily GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 AL543_11820 8378f5ecbef512621155b8762f897a7d 168 Gene3D G3DSA:3.90.950.20 1 160 1.8E-57 T 11-10-2018 IPR036653 CinA-like, C-terminal AL543_11820 8378f5ecbef512621155b8762f897a7d 168 SUPERFAMILY SSF142433 4 159 2.09E-54 T 11-10-2018 IPR036653 CinA-like, C-terminal AL543_11820 8378f5ecbef512621155b8762f897a7d 168 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 14 158 2.0E-50 T 11-10-2018 IPR008136 CinA, C-terminal AL543_11820 8378f5ecbef512621155b8762f897a7d 168 Pfam PF02464 Competence-damaged protein 6 158 1.4E-56 T 11-10-2018 IPR008136 CinA, C-terminal AL543_19180 33481b8c878cc7bc88704067682ad1cf 615 Gene3D G3DSA:1.10.1370.10 54 246 2.2E-6 T 11-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 AL543_19180 33481b8c878cc7bc88704067682ad1cf 615 Gene3D G3DSA:1.10.1370.10 381 541 2.6E-18 T 11-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 AL543_19180 33481b8c878cc7bc88704067682ad1cf 615 SUPERFAMILY SSF55486 4 551 9.94E-71 T 11-10-2018 AL543_19180 33481b8c878cc7bc88704067682ad1cf 615 Gene3D G3DSA:3.40.390.10 283 380 2.6E-18 T 11-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 AL543_19180 33481b8c878cc7bc88704067682ad1cf 615 Pfam PF01432 Peptidase family M3 283 490 8.0E-16 T 11-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 AL543_04620 009abe39ec6a9fd2745a684a4abfbebe 287 Pfam PF00480 ROK family 4 285 3.7E-61 T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AL543_04620 009abe39ec6a9fd2745a684a4abfbebe 287 Gene3D G3DSA:3.30.420.40 5 282 3.8E-74 T 11-10-2018 AL543_04620 009abe39ec6a9fd2745a684a4abfbebe 287 ProSitePatterns PS01125 ROK family signature. 128 155 - T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AL543_04620 009abe39ec6a9fd2745a684a4abfbebe 287 Hamap MF_01234 N-acetylmannosamine kinase [nanK]. 1 287 47.75 T 11-10-2018 IPR023945 N-acetylmannosamine kinase, bacterial GO:0005524|GO:0008270|GO:0009384|GO:0019262 KEGG: 00520+2.7.1.60|MetaCyc: PWY-6138 AL543_04620 009abe39ec6a9fd2745a684a4abfbebe 287 SUPERFAMILY SSF53067 1 285 5.68E-49 T 11-10-2018 AL543_04620 009abe39ec6a9fd2745a684a4abfbebe 287 Gene3D G3DSA:3.30.420.40 118 269 3.8E-74 T 11-10-2018 AL543_13450 e21abe027d017c6f1431c82b1cb778d9 137 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 27 2.1E-9 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL543_13450 e21abe027d017c6f1431c82b1cb778d9 137 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL543_13450 e21abe027d017c6f1431c82b1cb778d9 137 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 1.4E-5 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL543_14515 1a2fe7815bffe814edcef23671b338f1 653 SUPERFAMILY SSF81345 341 653 1.83E-66 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AL543_14515 1a2fe7815bffe814edcef23671b338f1 653 SUPERFAMILY SSF81345 6 324 1.7E-63 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AL543_14515 1a2fe7815bffe814edcef23671b338f1 653 Pfam PF01032 FecCD transport family 364 653 7.0E-70 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AL543_14515 1a2fe7815bffe814edcef23671b338f1 653 Pfam PF01032 FecCD transport family 12 324 2.7E-73 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AL543_14515 1a2fe7815bffe814edcef23671b338f1 653 Gene3D G3DSA:1.10.3470.10 343 653 5.5E-71 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AL543_14515 1a2fe7815bffe814edcef23671b338f1 653 Gene3D G3DSA:1.10.3470.10 2 328 3.1E-77 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AL543_10170 257c014c0f297752958f47adcf65cbdd 196 Gene3D G3DSA:1.10.357.10 3 196 1.2E-80 T 11-10-2018 AL543_10170 257c014c0f297752958f47adcf65cbdd 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 58 2.4E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL543_10170 257c014c0f297752958f47adcf65cbdd 196 SUPERFAMILY SSF46689 5 78 2.24E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_10170 257c014c0f297752958f47adcf65cbdd 196 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 196 40.901 T 11-10-2018 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 AL543_10170 257c014c0f297752958f47adcf65cbdd 196 SUPERFAMILY SSF48498 81 191 5.63E-10 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AL543_15045 8623c72580c78641db33f64b13bf5642 415 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 372 4.5E-90 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AL543_15045 8623c72580c78641db33f64b13bf5642 415 Gene3D G3DSA:1.20.1090.10 186 383 2.8E-42 T 11-10-2018 AL543_15045 8623c72580c78641db33f64b13bf5642 415 SUPERFAMILY SSF56796 1 380 3.01E-89 T 11-10-2018 AL543_15045 8623c72580c78641db33f64b13bf5642 415 Gene3D G3DSA:3.40.50.1970 1 180 2.1E-47 T 11-10-2018 AL543_16885 891f38a0ff1127677042fe266166738d 530 Gene3D G3DSA:3.40.50.300 282 529 3.0E-50 T 11-10-2018 AL543_16885 891f38a0ff1127677042fe266166738d 530 Gene3D G3DSA:3.40.50.300 2 281 5.8E-56 T 11-10-2018 AL543_16885 891f38a0ff1127677042fe266166738d 530 SUPERFAMILY SSF52540 333 517 2.47E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_16885 891f38a0ff1127677042fe266166738d 530 Pfam PF12848 ABC transporter 224 309 9.1E-21 T 11-10-2018 IPR032781 ABC-transporter extension domain AL543_16885 891f38a0ff1127677042fe266166738d 530 SUPERFAMILY SSF52540 7 237 8.89E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_16885 891f38a0ff1127677042fe266166738d 530 Pfam PF00005 ABC transporter 18 184 7.3E-21 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_16885 891f38a0ff1127677042fe266166738d 530 Pfam PF00005 ABC transporter 336 466 2.1E-21 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_16885 891f38a0ff1127677042fe266166738d 530 SUPERFAMILY SSF52540 253 253 9.03E-11 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_16885 891f38a0ff1127677042fe266166738d 530 SMART SM00382 26 238 1.1E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_16885 891f38a0ff1127677042fe266166738d 530 SMART SM00382 343 511 6.1E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_06700 3620aaf02309bcca0fc935152d239382 231 Gene3D G3DSA:3.40.50.1580 1 231 2.9E-73 T 11-10-2018 AL543_06700 3620aaf02309bcca0fc935152d239382 231 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 228 6.7E-100 T 11-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AL543_06700 3620aaf02309bcca0fc935152d239382 231 Pfam PF01048 Phosphorylase superfamily 2 227 1.2E-50 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AL543_06700 3620aaf02309bcca0fc935152d239382 231 SUPERFAMILY SSF53167 1 230 3.01E-74 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 AL543_06700 3620aaf02309bcca0fc935152d239382 231 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 230 47.794 T 11-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AL543_04580 ca76ed8fe6275f779e1ceb7b0fcf6594 383 Gene3D G3DSA:2.120.10.80 185 376 1.6E-9 T 11-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 AL543_04580 ca76ed8fe6275f779e1ceb7b0fcf6594 383 Pfam PF01344 Kelch motif 79 129 4.2E-9 T 11-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 AL543_04580 ca76ed8fe6275f779e1ceb7b0fcf6594 383 SUPERFAMILY SSF117281 45 372 4.58E-27 T 11-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 AL543_04580 ca76ed8fe6275f779e1ceb7b0fcf6594 383 Hamap MF_01195 N-acetylneuraminate epimerase [nanM]. 6 383 45.45 T 11-10-2018 IPR019936 Mutatrotase, YjhT-like AL543_04580 ca76ed8fe6275f779e1ceb7b0fcf6594 383 Gene3D G3DSA:2.120.10.80 16 184 6.0E-14 T 11-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 AL543_04580 ca76ed8fe6275f779e1ceb7b0fcf6594 383 TIGRFAM TIGR03547 muta_rot_YjhT: mutatrotase, YjhT family 27 375 3.0E-144 T 11-10-2018 IPR019936 Mutatrotase, YjhT-like AL543_09620 49b5d93aba74d574053ffad1a2fca1e2 305 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 301 4.1E-174 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL543_09620 49b5d93aba74d574053ffad1a2fca1e2 305 Gene3D G3DSA:1.20.58.180 215 297 2.5E-34 T 11-10-2018 AL543_09620 49b5d93aba74d574053ffad1a2fca1e2 305 SUPERFAMILY SSF55681 8 292 2.19E-134 T 11-10-2018 AL543_09620 49b5d93aba74d574053ffad1a2fca1e2 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 4.2E-71 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL543_09620 49b5d93aba74d574053ffad1a2fca1e2 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 4.2E-71 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL543_09620 49b5d93aba74d574053ffad1a2fca1e2 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 4.2E-71 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL543_09620 49b5d93aba74d574053ffad1a2fca1e2 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 4.2E-71 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL543_09620 49b5d93aba74d574053ffad1a2fca1e2 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 253 269 4.2E-71 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL543_09620 49b5d93aba74d574053ffad1a2fca1e2 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 4.2E-71 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL543_09620 49b5d93aba74d574053ffad1a2fca1e2 305 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 292 7.1E-150 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL543_09620 49b5d93aba74d574053ffad1a2fca1e2 305 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 293 62.172 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL543_09620 49b5d93aba74d574053ffad1a2fca1e2 305 Gene3D G3DSA:3.30.930.10 1 214 6.4E-111 T 11-10-2018 AL543_03095 cc65a017604c80007a21c7bc61b53640 107 SUPERFAMILY SSF54913 3 105 8.9E-36 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AL543_03095 cc65a017604c80007a21c7bc61b53640 107 Pfam PF03091 CutA1 divalent ion tolerance protein 7 103 1.5E-34 T 11-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 AL543_03095 cc65a017604c80007a21c7bc61b53640 107 Gene3D G3DSA:3.30.70.120 1 106 2.2E-36 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AL543_18980 bd97f9aeabd97cda24dab67688f6bffe 220 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 191 3.2E-29 T 11-10-2018 AL543_18980 bd97f9aeabd97cda24dab67688f6bffe 220 Gene3D G3DSA:3.40.50.1000 6 216 1.2E-61 T 11-10-2018 IPR023214 HAD superfamily AL543_18980 bd97f9aeabd97cda24dab67688f6bffe 220 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 5 204 1.1E-68 T 11-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like AL543_18980 bd97f9aeabd97cda24dab67688f6bffe 220 Pfam PF12710 haloacid dehalogenase-like hydrolase 7 189 9.8E-29 T 11-10-2018 AL543_18980 bd97f9aeabd97cda24dab67688f6bffe 220 Gene3D G3DSA:1.20.1440.100 17 90 1.2E-61 T 11-10-2018 AL543_18980 bd97f9aeabd97cda24dab67688f6bffe 220 SUPERFAMILY SSF56784 1 213 5.56E-32 T 11-10-2018 IPR036412 HAD-like superfamily AL543_03825 efea305cf74359ffc206f15d62278fbc 520 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 22 113 1.7E-13 T 11-10-2018 IPR000014 PAS domain AL543_03825 efea305cf74359ffc206f15d62278fbc 520 SUPERFAMILY SSF58104 241 518 5.62E-59 T 11-10-2018 AL543_03825 efea305cf74359ffc206f15d62278fbc 520 Gene3D G3DSA:1.10.287.950 197 518 1.6E-53 T 11-10-2018 AL543_03825 efea305cf74359ffc206f15d62278fbc 520 SMART SM00283 257 518 1.1E-42 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_03825 efea305cf74359ffc206f15d62278fbc 520 SUPERFAMILY SSF55785 20 114 6.28E-26 T 11-10-2018 IPR035965 PAS domain superfamily AL543_03825 efea305cf74359ffc206f15d62278fbc 520 Pfam PF08447 PAS fold 31 114 2.2E-14 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 AL543_03825 efea305cf74359ffc206f15d62278fbc 520 Gene3D G3DSA:3.30.450.20 8 151 9.3E-25 T 11-10-2018 AL543_03825 efea305cf74359ffc206f15d62278fbc 520 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 332 484 2.2E-34 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_13900 482ae196b392373dc255bc1ad2d62ab4 105 Gene3D G3DSA:3.30.460.10 3 105 2.3E-34 T 11-10-2018 AL543_13900 482ae196b392373dc255bc1ad2d62ab4 105 Pfam PF02410 Ribosomal silencing factor during starvation 14 104 6.5E-26 T 11-10-2018 AL543_13900 482ae196b392373dc255bc1ad2d62ab4 105 SUPERFAMILY SSF81301 5 105 1.21E-34 T 11-10-2018 AL543_13900 482ae196b392373dc255bc1ad2d62ab4 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 2 105 23.557 T 11-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AL543_13900 482ae196b392373dc255bc1ad2d62ab4 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 9 104 4.7E-36 T 11-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AL543_17180 6a6cfdd3e7c54e19e3378221d4331031 152 Pfam PF09900 Predicted membrane protein (DUF2127) 7 143 2.3E-41 T 11-10-2018 IPR021125 Protein of unknown function DUF2127 AL543_15110 36bba4296c0c268baf24e2a2a5e044d3 364 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 6 363 51.797 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 AL543_15110 36bba4296c0c268baf24e2a2a5e044d3 364 Gene3D G3DSA:3.90.1150.10 262 364 5.1E-41 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL543_15110 36bba4296c0c268baf24e2a2a5e044d3 364 PIRSF PIRSF000525 2 364 1.1E-153 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 AL543_15110 36bba4296c0c268baf24e2a2a5e044d3 364 Gene3D G3DSA:3.40.640.10 21 261 4.7E-88 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL543_15110 36bba4296c0c268baf24e2a2a5e044d3 364 Pfam PF00266 Aminotransferase class-V 8 352 4.8E-63 T 11-10-2018 IPR000192 Aminotransferase class V domain AL543_15110 36bba4296c0c268baf24e2a2a5e044d3 364 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 8 363 2.6E-162 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 AL543_15110 36bba4296c0c268baf24e2a2a5e044d3 364 SUPERFAMILY SSF53383 7 360 1.2E-113 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL543_11905 a2531901c3eb87be841de97a0cb3b1f7 316 Gene3D G3DSA:3.90.180.10 10 310 1.1E-94 T 11-10-2018 AL543_11905 a2531901c3eb87be841de97a0cb3b1f7 316 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 92 7.3E-7 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AL543_11905 a2531901c3eb87be841de97a0cb3b1f7 316 SUPERFAMILY SSF51735 122 257 9.17E-30 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_11905 a2531901c3eb87be841de97a0cb3b1f7 316 SUPERFAMILY SSF50129 4 154 7.61E-36 T 11-10-2018 IPR011032 GroES-like superfamily AL543_11905 a2531901c3eb87be841de97a0cb3b1f7 316 SMART SM00829 12 312 1.3E-14 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AL543_11905 a2531901c3eb87be841de97a0cb3b1f7 316 Pfam PF13602 Zinc-binding dehydrogenase 191 312 2.0E-19 T 11-10-2018 AL543_11905 a2531901c3eb87be841de97a0cb3b1f7 316 Gene3D G3DSA:3.40.50.720 133 263 1.1E-94 T 11-10-2018 AL543_07150 e0c7ccc0584109f78152fbecdcd40324 190 Gene3D G3DSA:1.10.1740.10 1 121 1.2E-45 T 11-10-2018 AL543_07150 e0c7ccc0584109f78152fbecdcd40324 190 Pfam PF04542 Sigma-70 region 2 25 92 9.1E-19 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AL543_07150 e0c7ccc0584109f78152fbecdcd40324 190 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 2 190 1.7E-101 T 11-10-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL543_07150 e0c7ccc0584109f78152fbecdcd40324 190 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 185 4.7E-33 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AL543_07150 e0c7ccc0584109f78152fbecdcd40324 190 Gene3D G3DSA:1.10.10.10 122 190 2.8E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_07150 e0c7ccc0584109f78152fbecdcd40324 190 Pfam PF08281 Sigma-70, region 4 134 181 2.1E-17 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL543_07150 e0c7ccc0584109f78152fbecdcd40324 190 SUPERFAMILY SSF88659 124 185 2.43E-17 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AL543_07150 e0c7ccc0584109f78152fbecdcd40324 190 SUPERFAMILY SSF88946 2 108 2.2E-33 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AL543_09195 ba6088ecb542816f4a291285a9010dcb 141 SUPERFAMILY SSF52402 3 139 8.37E-32 T 11-10-2018 AL543_09195 ba6088ecb542816f4a291285a9010dcb 141 PIRSF PIRSF006276 1 141 1.2E-52 T 11-10-2018 IPR006015 Universal stress protein A AL543_09195 ba6088ecb542816f4a291285a9010dcb 141 Pfam PF00582 Universal stress protein family 3 138 1.9E-20 T 11-10-2018 IPR006016 UspA AL543_09195 ba6088ecb542816f4a291285a9010dcb 141 Gene3D G3DSA:3.40.50.620 2 141 1.1E-46 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL543_18890 10b0ca4ecb417346f5fa4add63f28b3a 208 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 125 138 - T 11-10-2018 IPR033135 ClpP, histidine active site AL543_18890 10b0ca4ecb417346f5fa4add63f28b3a 208 Pfam PF00574 Clp protease 25 205 5.7E-90 T 11-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AL543_18890 10b0ca4ecb417346f5fa4add63f28b3a 208 Gene3D G3DSA:3.90.226.10 5 207 4.4E-85 T 11-10-2018 AL543_18890 10b0ca4ecb417346f5fa4add63f28b3a 208 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 103 114 - T 11-10-2018 IPR018215 ClpP, Ser active site AL543_18890 10b0ca4ecb417346f5fa4add63f28b3a 208 SUPERFAMILY SSF52096 23 206 7.23E-76 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AL543_18890 10b0ca4ecb417346f5fa4add63f28b3a 208 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 16 206 44.565 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AL543_18890 10b0ca4ecb417346f5fa4add63f28b3a 208 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 15 205 2.5E-107 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AL543_18890 10b0ca4ecb417346f5fa4add63f28b3a 208 PRINTS PR00127 Clp protease catalytic subunit P signature 32 47 2.3E-54 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AL543_18890 10b0ca4ecb417346f5fa4add63f28b3a 208 PRINTS PR00127 Clp protease catalytic subunit P signature 181 200 2.3E-54 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AL543_18890 10b0ca4ecb417346f5fa4add63f28b3a 208 PRINTS PR00127 Clp protease catalytic subunit P signature 103 120 2.3E-54 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AL543_18890 10b0ca4ecb417346f5fa4add63f28b3a 208 PRINTS PR00127 Clp protease catalytic subunit P signature 72 92 2.3E-54 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AL543_18890 10b0ca4ecb417346f5fa4add63f28b3a 208 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 2.3E-54 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AL543_09550 6edec75b2504d1d587c0440637cba2af 118 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 16 105 3.0E-47 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AL543_09550 6edec75b2504d1d587c0440637cba2af 118 Pfam PF00825 Ribonuclease P 6 112 9.8E-32 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AL543_09550 6edec75b2504d1d587c0440637cba2af 118 SUPERFAMILY SSF54211 4 114 2.23E-30 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL543_09550 6edec75b2504d1d587c0440637cba2af 118 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 115 16.971 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AL543_09550 6edec75b2504d1d587c0440637cba2af 118 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 6 113 4.8E-26 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AL543_09550 6edec75b2504d1d587c0440637cba2af 118 Gene3D G3DSA:3.30.230.10 1 118 5.4E-40 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL543_19945 8ff64e7eace3b9501fde990af6393559 439 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 21 437 3.2E-174 T 11-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL543_19945 8ff64e7eace3b9501fde990af6393559 439 Gene3D G3DSA:3.40.50.12240 17 439 4.4E-156 T 11-10-2018 AL543_19945 8ff64e7eace3b9501fde990af6393559 439 SMART SM00382 158 342 6.7E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_19945 8ff64e7eace3b9501fde990af6393559 439 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 24 435 3.5E-194 T 11-10-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL543_19945 8ff64e7eace3b9501fde990af6393559 439 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 348 357 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL543_19945 8ff64e7eace3b9501fde990af6393559 439 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 146 357 5.8E-73 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL543_19945 8ff64e7eace3b9501fde990af6393559 439 SUPERFAMILY SSF52540 94 362 1.24E-95 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_01390 28b4ba27f5633e083d587ab2829d400a 268 Pfam PF13503 Domain of unknown function (DUF4123) 17 121 3.4E-6 T 11-10-2018 IPR025391 Domain of unknown function DUF4123 AL543_15260 16fde65e64f5048f1784b618d8dc6b92 368 Pfam PF01259 SAICAR synthetase 22 293 3.3E-48 T 11-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL543_15260 16fde65e64f5048f1784b618d8dc6b92 368 Gene3D G3DSA:3.30.200.20 12 128 2.7E-24 T 11-10-2018 AL543_15260 16fde65e64f5048f1784b618d8dc6b92 368 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 19 342 21.402 T 11-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL543_15260 16fde65e64f5048f1784b618d8dc6b92 368 TIGRFAM TIGR02735 purC_vibrio: phosphoribosylaminoimidazole-succinocarboxamide synthase 2 366 2.6E-226 T 11-10-2018 IPR014106 Phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio-type GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 AL543_15260 16fde65e64f5048f1784b618d8dc6b92 368 SUPERFAMILY SSF56104 14 344 7.85E-67 T 11-10-2018 AL543_15260 16fde65e64f5048f1784b618d8dc6b92 368 Gene3D G3DSA:3.30.470.20 129 284 8.7E-40 T 11-10-2018 AL543_15260 16fde65e64f5048f1784b618d8dc6b92 368 ProSitePatterns PS01057 SAICAR synthetase signature 1. 124 138 - T 11-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL543_13670 85db3c37ab2312f9b20b49873dc8207e 478 Pfam PF02378 Phosphotransferase system, EIIC 116 406 2.0E-33 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL543_13670 85db3c37ab2312f9b20b49873dc8207e 478 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 34 115 1.9E-13 T 11-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AL543_13670 85db3c37ab2312f9b20b49873dc8207e 478 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 10 465 1.4E-204 T 11-10-2018 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 KEGG: 00500+2.7.1.201 AL543_13670 85db3c37ab2312f9b20b49873dc8207e 478 SUPERFAMILY SSF55604 14 86 7.06E-20 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AL543_13670 85db3c37ab2312f9b20b49873dc8207e 478 Gene3D G3DSA:3.30.1360.60 3 82 1.8E-22 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AL543_13670 85db3c37ab2312f9b20b49873dc8207e 478 Pfam PF00367 phosphotransferase system, EIIB 15 47 1.0E-12 T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL543_13670 85db3c37ab2312f9b20b49873dc8207e 478 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 25 42 - T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL543_03335 0e6909c7065545bc445b07a93707806d 436 TIGRFAM TIGR03378 glycerol3P_GlpB: glycerol-3-phosphate dehydrogenase, anaerobic, B subunit 4 423 6.9E-190 T 11-10-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 AL543_03335 0e6909c7065545bc445b07a93707806d 436 Hamap MF_00753 Anaerobic glycerol-3-phosphate dehydrogenase subunit B [glpB]. 2 426 50.404 T 11-10-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 AL543_03335 0e6909c7065545bc445b07a93707806d 436 Pfam PF00890 FAD binding domain 5 410 5.9E-66 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL543_03335 0e6909c7065545bc445b07a93707806d 436 SUPERFAMILY SSF51905 1 424 1.5E-23 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_03335 0e6909c7065545bc445b07a93707806d 436 PIRSF PIRSF000141 2 429 2.4E-183 T 11-10-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 AL543_03335 0e6909c7065545bc445b07a93707806d 436 Gene3D G3DSA:3.50.50.60 3 80 2.9E-10 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_18505 cfeba228248ecf5ba3732e20ee578ec0 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 227 3.6E-18 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL543_18505 cfeba228248ecf5ba3732e20ee578ec0 235 Gene3D G3DSA:1.10.10.10 121 230 2.4E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_18505 cfeba228248ecf5ba3732e20ee578ec0 235 SMART SM00862 152 227 5.7E-16 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL543_18505 cfeba228248ecf5ba3732e20ee578ec0 235 SMART SM00448 4 114 1.2E-47 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_18505 cfeba228248ecf5ba3732e20ee578ec0 235 Pfam PF00072 Response regulator receiver domain 6 115 3.6E-33 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_18505 cfeba228248ecf5ba3732e20ee578ec0 235 Gene3D G3DSA:3.40.50.2300 1 120 5.6E-42 T 11-10-2018 AL543_18505 cfeba228248ecf5ba3732e20ee578ec0 235 SUPERFAMILY SSF46894 132 228 2.01E-18 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL543_18505 cfeba228248ecf5ba3732e20ee578ec0 235 SUPERFAMILY SSF52172 3 129 1.57E-44 T 11-10-2018 IPR011006 CheY-like superfamily AL543_09610 10dec0481cadb81d9b3f73d6eccc560d 418 SUPERFAMILY SSF53383 13 411 1.06E-61 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL543_09610 10dec0481cadb81d9b3f73d6eccc560d 418 Gene3D G3DSA:3.40.640.10 1 416 1.4E-147 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL543_09610 10dec0481cadb81d9b3f73d6eccc560d 418 Pfam PF00155 Aminotransferase class I and II 68 399 1.8E-26 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL543_13575 24cff3f6bdda487541a47eaf26e4224d 80 PIRSF PIRSF006488 1 77 5.0E-21 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AL543_13575 24cff3f6bdda487541a47eaf26e4224d 80 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 50 3.0E-13 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AL543_13575 24cff3f6bdda487541a47eaf26e4224d 80 Pfam PF02609 Exonuclease VII small subunit 11 61 1.6E-17 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AL543_13575 24cff3f6bdda487541a47eaf26e4224d 80 Gene3D G3DSA:1.10.287.1040 4 77 1.3E-22 T 11-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 AL543_13575 24cff3f6bdda487541a47eaf26e4224d 80 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 10 65 2.5E-20 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AL543_13575 24cff3f6bdda487541a47eaf26e4224d 80 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 10 70 15.463 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AL543_13575 24cff3f6bdda487541a47eaf26e4224d 80 SUPERFAMILY SSF116842 2 73 1.7E-20 T 11-10-2018 AL543_06990 0cab90c110347394f6613480bfeff24b 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 283 312 1.5E-21 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL543_06990 0cab90c110347394f6613480bfeff24b 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 254 281 1.5E-21 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL543_06990 0cab90c110347394f6613480bfeff24b 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 68 88 1.5E-21 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL543_06990 0cab90c110347394f6613480bfeff24b 418 SMART SM00304 89 141 0.0037 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_06990 0cab90c110347394f6613480bfeff24b 418 SUPERFAMILY SSF58104 109 418 3.01E-75 T 11-10-2018 AL543_06990 0cab90c110347394f6613480bfeff24b 418 SMART SM00283 156 417 6.4E-70 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_06990 0cab90c110347394f6613480bfeff24b 418 Gene3D G3DSA:1.10.287.950 90 418 5.2E-69 T 11-10-2018 AL543_06990 0cab90c110347394f6613480bfeff24b 418 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 202 384 3.0E-42 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_05885 93cccf42fee93dfbc207d068ccdd5822 264 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 176 194 2.2E-9 T 11-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AL543_05885 93cccf42fee93dfbc207d068ccdd5822 264 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 208 227 2.2E-9 T 11-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AL543_05885 93cccf42fee93dfbc207d068ccdd5822 264 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 72 94 2.2E-9 T 11-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AL543_05885 93cccf42fee93dfbc207d068ccdd5822 264 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 13 227 6.2E-46 T 11-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AL543_05885 93cccf42fee93dfbc207d068ccdd5822 264 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 12 251 1.3E-98 T 11-10-2018 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|KEGG: 00790+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158 AL543_05885 93cccf42fee93dfbc207d068ccdd5822 264 SUPERFAMILY SSF56534 3 253 9.94E-95 T 11-10-2018 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily AL543_05885 93cccf42fee93dfbc207d068ccdd5822 264 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 115 126 - T 11-10-2018 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 AL543_05885 93cccf42fee93dfbc207d068ccdd5822 264 Gene3D G3DSA:1.10.800.10 1 263 2.6E-97 T 11-10-2018 IPR036951 Aromatic amino acid hydroxylase superfamily GO:0004497|GO:0005506|GO:0009072|GO:0055114 AL543_02230 0f2335b5faaa28d4429752481a5af4f5 452 Gene3D G3DSA:1.20.1250.20 18 227 3.9E-58 T 11-10-2018 AL543_02230 0f2335b5faaa28d4429752481a5af4f5 452 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 418 4.4E-152 T 11-10-2018 AL543_02230 0f2335b5faaa28d4429752481a5af4f5 452 Pfam PF07690 Major Facilitator Superfamily 34 401 2.2E-48 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL543_02230 0f2335b5faaa28d4429752481a5af4f5 452 Gene3D G3DSA:1.20.1250.20 241 451 1.0E-62 T 11-10-2018 AL543_02230 0f2335b5faaa28d4429752481a5af4f5 452 SUPERFAMILY SSF103473 19 443 6.41E-86 T 11-10-2018 IPR036259 MFS transporter superfamily AL543_02230 0f2335b5faaa28d4429752481a5af4f5 452 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 11-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 AL543_02230 0f2335b5faaa28d4429752481a5af4f5 452 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 439 1.0E-236 T 11-10-2018 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 AL543_02230 0f2335b5faaa28d4429752481a5af4f5 452 PIRSF PIRSF002808 5 452 9.9E-170 T 11-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 AL543_06885 2358b0e496dbacc1c437ff3fc383722a 250 Gene3D G3DSA:3.10.450.70 26 89 6.8E-18 T 11-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 AL543_06885 2358b0e496dbacc1c437ff3fc383722a 250 Gene3D G3DSA:3.40.30.10 91 249 4.4E-46 T 11-10-2018 AL543_06885 2358b0e496dbacc1c437ff3fc383722a 250 SUPERFAMILY SSF52833 108 247 5.38E-37 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL543_06885 2358b0e496dbacc1c437ff3fc383722a 250 Pfam PF10411 Disulfide bond isomerase protein N-terminus 35 85 1.3E-14 T 11-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal AL543_06885 2358b0e496dbacc1c437ff3fc383722a 250 SUPERFAMILY SSF54423 32 86 1.96E-12 T 11-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 AL543_06885 2358b0e496dbacc1c437ff3fc383722a 250 Pfam PF13098 Thioredoxin-like domain 118 246 6.8E-25 T 11-10-2018 IPR012336 Thioredoxin-like fold AL543_06885 2358b0e496dbacc1c437ff3fc383722a 250 ProSitePatterns PS00194 Thioredoxin family active site. 125 143 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AL543_08820 a25656261439b78a5b945795e1c8aa09 209 Pfam PF07947 YhhN family 28 206 2.2E-30 T 11-10-2018 IPR012506 YhhN-like GO:0016021 AL543_05025 c0fdb8825fa3c29a30a674b1571619e2 82 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 11 72 6.4E-7 T 11-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AL543_05025 c0fdb8825fa3c29a30a674b1571619e2 82 SUPERFAMILY SSF143120 12 70 6.93E-7 T 11-10-2018 IPR036165 YefM-like superfamily AL543_13430 66b72f0f82a67ae79089c0c4a9bef663 147 Pfam PF07963 Prokaryotic N-terminal methylation motif 16 39 2.7E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL543_13430 66b72f0f82a67ae79089c0c4a9bef663 147 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 17 37 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL543_13430 66b72f0f82a67ae79089c0c4a9bef663 147 Gene3D G3DSA:3.30.700.10 20 146 1.6E-20 T 11-10-2018 AL543_13430 66b72f0f82a67ae79089c0c4a9bef663 147 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 16 39 1.8E-9 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL543_13430 66b72f0f82a67ae79089c0c4a9bef663 147 SUPERFAMILY SSF54523 19 135 1.88E-20 T 11-10-2018 AL543_13430 66b72f0f82a67ae79089c0c4a9bef663 147 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 40 126 4.9E-14 T 11-10-2018 IPR031982 Type IV minor pilin ComP AL543_03125 ad2c0d4d7e1bf19f677942b41fc3b7d8 215 SUPERFAMILY SSF52266 36 213 1.53E-51 T 11-10-2018 AL543_03125 ad2c0d4d7e1bf19f677942b41fc3b7d8 215 Gene3D G3DSA:3.40.50.1110 35 215 1.8E-67 T 11-10-2018 IPR036514 SGNH hydrolase superfamily AL543_03125 ad2c0d4d7e1bf19f677942b41fc3b7d8 215 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 38 48 - T 11-10-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 AL543_03125 ad2c0d4d7e1bf19f677942b41fc3b7d8 215 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 41 198 8.8E-24 T 11-10-2018 IPR013830 SGNH hydrolase-type esterase domain AL543_04505 6f5d7e74f3802c064c2c7504fd5fba36 318 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 3 307 1.6E-104 T 11-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 AL543_04505 6f5d7e74f3802c064c2c7504fd5fba36 318 Pfam PF03741 Integral membrane protein TerC family 75 275 6.4E-54 T 11-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 AL543_02740 ab59274d98cf46322f6c9a71aece5744 451 SMART SM00487 20 219 5.2E-60 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL543_02740 ab59274d98cf46322f6c9a71aece5744 451 Pfam PF00271 Helicase conserved C-terminal domain 230 338 1.8E-27 T 11-10-2018 IPR001650 Helicase, C-terminal AL543_02740 ab59274d98cf46322f6c9a71aece5744 451 SUPERFAMILY SSF52540 73 359 9.76E-74 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_02740 ab59274d98cf46322f6c9a71aece5744 451 Gene3D G3DSA:3.40.50.300 217 402 5.0E-45 T 11-10-2018 AL543_02740 ab59274d98cf46322f6c9a71aece5744 451 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 447 50.43 T 11-10-2018 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 AL543_02740 ab59274d98cf46322f6c9a71aece5744 451 Gene3D G3DSA:3.40.50.300 1 210 5.9E-75 T 11-10-2018 AL543_02740 ab59274d98cf46322f6c9a71aece5744 451 SMART SM00490 257 338 3.6E-31 T 11-10-2018 IPR001650 Helicase, C-terminal AL543_02740 ab59274d98cf46322f6c9a71aece5744 451 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AL543_02740 ab59274d98cf46322f6c9a71aece5744 451 Pfam PF00270 DEAD/DEAH box helicase 26 194 9.4E-46 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL543_18920 31fb7bb2b6a6c39ebc2f3b44c8a98e95 232 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 40 192 4.0E-26 T 11-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ AL543_14005 099a2553a62cc2a485d52a4924280412 136 SUPERFAMILY SSF46955 1 126 2.75E-35 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AL543_14005 099a2553a62cc2a485d52a4924280412 136 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 127 2.1E-59 T 11-10-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 AL543_14005 099a2553a62cc2a485d52a4924280412 136 SMART SM00422 1 70 3.6E-26 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL543_14005 099a2553a62cc2a485d52a4924280412 136 Pfam PF09278 MerR, DNA binding 45 107 3.2E-17 T 11-10-2018 IPR015358 Transcription regulator MerR, DNA binding AL543_14005 099a2553a62cc2a485d52a4924280412 136 Pfam PF00376 MerR family regulatory protein 2 39 3.5E-14 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL543_14005 099a2553a62cc2a485d52a4924280412 136 Gene3D G3DSA:1.10.1660.10 1 125 4.0E-32 T 11-10-2018 AL543_14005 099a2553a62cc2a485d52a4924280412 136 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL543_12665 b880c86b6eb1454238326e49b021b7b8 324 SMART SM00363 18 83 1.1E-8 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_12665 b880c86b6eb1454238326e49b021b7b8 324 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL543_12665 b880c86b6eb1454238326e49b021b7b8 324 Pfam PF00849 RNA pseudouridylate synthase 92 241 4.3E-32 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL543_12665 b880c86b6eb1454238326e49b021b7b8 324 Pfam PF01479 S4 domain 18 65 1.5E-8 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_12665 b880c86b6eb1454238326e49b021b7b8 324 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 14 312 2.7E-105 T 11-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL543_12665 b880c86b6eb1454238326e49b021b7b8 324 SUPERFAMILY SSF55174 17 69 6.73E-11 T 11-10-2018 AL543_12665 b880c86b6eb1454238326e49b021b7b8 324 Gene3D G3DSA:3.10.290.10 2 76 1.5E-23 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AL543_12665 b880c86b6eb1454238326e49b021b7b8 324 SUPERFAMILY SSF55120 77 309 1.25E-78 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL543_12665 b880c86b6eb1454238326e49b021b7b8 324 Gene3D G3DSA:3.30.2350.10 84 315 2.1E-72 T 11-10-2018 AL543_02955 da72c08c19ee191de8662e59a732c020 347 Pfam PF13358 DDE superfamily endonuclease 169 312 1.9E-34 T 11-10-2018 IPR038717 Tc1-like transposase, DDE domain AL543_02955 da72c08c19ee191de8662e59a732c020 347 Pfam PF13384 Homeodomain-like domain 28 67 4.3E-7 T 11-10-2018 AL543_02955 da72c08c19ee191de8662e59a732c020 347 SUPERFAMILY SSF53098 221 316 2.58E-7 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_02955 da72c08c19ee191de8662e59a732c020 347 Gene3D G3DSA:3.30.420.470 138 344 4.4E-12 T 11-10-2018 AL543_02955 da72c08c19ee191de8662e59a732c020 347 Pfam PF13592 Winged helix-turn helix 99 155 3.7E-18 T 11-10-2018 IPR025959 Winged helix-turn helix domain AL543_02955 da72c08c19ee191de8662e59a732c020 347 SUPERFAMILY SSF46689 16 131 8.96E-24 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_00985 56b2a2d84803211666dc99826e15c36b 297 SUPERFAMILY SSF103481 184 284 1.18E-5 T 11-10-2018 AL543_00985 56b2a2d84803211666dc99826e15c36b 297 Pfam PF00892 EamA-like transporter family 3 134 3.8E-18 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL543_00985 56b2a2d84803211666dc99826e15c36b 297 Pfam PF00892 EamA-like transporter family 148 279 5.1E-11 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL543_00985 56b2a2d84803211666dc99826e15c36b 297 SUPERFAMILY SSF103481 36 136 4.05E-11 T 11-10-2018 AL543_18995 47c39088e8bb4bcc7806fc8e61cafabc 299 SUPERFAMILY SSF161098 23 294 3.55E-43 T 11-10-2018 IPR035906 MetI-like superfamily AL543_18995 47c39088e8bb4bcc7806fc8e61cafabc 299 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 285 1.8E-7 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL543_18995 47c39088e8bb4bcc7806fc8e61cafabc 299 Gene3D G3DSA:1.10.3720.10 19 285 7.5E-36 T 11-10-2018 IPR035906 MetI-like superfamily AL543_09775 a2f548c61bd3dd2cffa4fe436270f502 377 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 2 346 36.968 T 11-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 AL543_09775 a2f548c61bd3dd2cffa4fe436270f502 377 Gene3D G3DSA:3.30.1490.20 92 177 2.8E-21 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AL543_09775 a2f548c61bd3dd2cffa4fe436270f502 377 SUPERFAMILY SSF56059 92 295 2.65E-56 T 11-10-2018 AL543_09775 a2f548c61bd3dd2cffa4fe436270f502 377 SUPERFAMILY SSF51246 299 373 5.34E-19 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AL543_09775 a2f548c61bd3dd2cffa4fe436270f502 377 Pfam PF02222 ATP-grasp domain 101 274 6.3E-51 T 11-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type AL543_09775 a2f548c61bd3dd2cffa4fe436270f502 377 Gene3D G3DSA:3.40.50.20 1 78 1.4E-19 T 11-10-2018 AL543_09775 a2f548c61bd3dd2cffa4fe436270f502 377 SUPERFAMILY SSF52440 1 88 1.58E-16 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AL543_09775 a2f548c61bd3dd2cffa4fe436270f502 377 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 3 350 1.5E-106 T 11-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 AL543_09775 a2f548c61bd3dd2cffa4fe436270f502 377 Gene3D G3DSA:3.30.470.20 178 369 8.8E-70 T 11-10-2018 AL543_04730 d532c48233add26801d4e68fdafccb16 155 ProSitePatterns PS01087 Radical activating enzymes signature. 14 35 - T 11-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 AL543_04730 d532c48233add26801d4e68fdafccb16 155 SUPERFAMILY SSF102114 23 118 2.35E-7 T 11-10-2018 AL543_04730 d532c48233add26801d4e68fdafccb16 155 Gene3D G3DSA:3.20.20.70 2 154 2.0E-24 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_04730 d532c48233add26801d4e68fdafccb16 155 Pfam PF13353 4Fe-4S single cluster domain 12 151 2.1E-54 T 11-10-2018 AL543_04730 d532c48233add26801d4e68fdafccb16 155 PIRSF PIRSF000368 1 155 2.5E-60 T 11-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 AL543_04730 d532c48233add26801d4e68fdafccb16 155 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 2 153 2.1E-63 T 11-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 AL543_02700 e2295736c6fd4d5d0e76369b1d899ee0 399 Pfam PF04865 Baseplate J-like protein 90 336 7.8E-27 T 11-10-2018 IPR006949 Baseplate protein J-like AL543_14790 7528512e13a821ad47fe715f26a15c4e 315 Pfam PF13410 Glutathione S-transferase, C-terminal domain 192 263 7.3E-14 T 11-10-2018 AL543_14790 7528512e13a821ad47fe715f26a15c4e 315 Gene3D G3DSA:1.20.1050.10 168 315 3.3E-71 T 11-10-2018 AL543_14790 7528512e13a821ad47fe715f26a15c4e 315 PIRSF PIRSF015753 5 312 1.9E-135 T 11-10-2018 IPR016639 Glutathione S-transferase Omega/GSH GO:0004364 AL543_14790 7528512e13a821ad47fe715f26a15c4e 315 Gene3D G3DSA:3.40.30.130 1 167 5.6E-66 T 11-10-2018 AL543_14790 7528512e13a821ad47fe715f26a15c4e 315 SUPERFAMILY SSF47616 164 312 3.34E-39 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AL543_14790 7528512e13a821ad47fe715f26a15c4e 315 SUPERFAMILY SSF52833 31 150 4.27E-16 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL543_14790 7528512e13a821ad47fe715f26a15c4e 315 Pfam PF13409 Glutathione S-transferase, N-terminal domain 56 146 2.0E-22 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL543_08420 cb83ad6e1fe50b94bafb66ce40c36d74 160 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 2 158 5.0E-73 T 11-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 AL543_08420 cb83ad6e1fe50b94bafb66ce40c36d74 160 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 26.89 T 11-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 AL543_08420 cb83ad6e1fe50b94bafb66ce40c36d74 160 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 156 1.2E-22 T 11-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AL543_08420 cb83ad6e1fe50b94bafb66ce40c36d74 160 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 157 51.686 T 11-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 AL543_08420 cb83ad6e1fe50b94bafb66ce40c36d74 160 PIRSF PIRSF006092 1 158 1.9E-44 T 11-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AL543_08420 cb83ad6e1fe50b94bafb66ce40c36d74 160 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 9.4E-25 T 11-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AL543_08420 cb83ad6e1fe50b94bafb66ce40c36d74 160 SUPERFAMILY SSF54534 80 156 3.66E-19 T 11-10-2018 AL543_08420 cb83ad6e1fe50b94bafb66ce40c36d74 160 Gene3D G3DSA:3.10.50.30 77 159 3.5E-31 T 11-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 AL543_08420 cb83ad6e1fe50b94bafb66ce40c36d74 160 Gene3D G3DSA:1.10.287.180 1 76 3.5E-30 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 AL543_08420 cb83ad6e1fe50b94bafb66ce40c36d74 160 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AL543_08420 cb83ad6e1fe50b94bafb66ce40c36d74 160 SUPERFAMILY SSF46557 3 78 3.92E-26 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 AL543_08420 cb83ad6e1fe50b94bafb66ce40c36d74 160 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AL543_18375 db5732cd2be0649cd52155b9f8e7ad1e 404 SUPERFAMILY SSF109604 181 399 2.67E-41 T 11-10-2018 AL543_18375 db5732cd2be0649cd52155b9f8e7ad1e 404 SMART SM00052 2 195 0.002 T 11-10-2018 IPR001633 EAL domain AL543_18375 db5732cd2be0649cd52155b9f8e7ad1e 404 Pfam PF00563 EAL domain 77 190 1.9E-13 T 11-10-2018 IPR001633 EAL domain AL543_18375 db5732cd2be0649cd52155b9f8e7ad1e 404 Gene3D G3DSA:3.20.20.450 3 194 1.5E-16 T 11-10-2018 IPR035919 EAL domain superfamily AL543_18375 db5732cd2be0649cd52155b9f8e7ad1e 404 PIRSF PIRSF003180 1 403 8.3E-166 T 11-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing AL543_18375 db5732cd2be0649cd52155b9f8e7ad1e 404 Pfam PF08668 HDOD domain 205 318 8.9E-14 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD AL543_18375 db5732cd2be0649cd52155b9f8e7ad1e 404 Gene3D G3DSA:1.10.3210.10 195 384 4.2E-21 T 11-10-2018 AL543_18375 db5732cd2be0649cd52155b9f8e7ad1e 404 SUPERFAMILY SSF141868 5 192 7.32E-28 T 11-10-2018 IPR035919 EAL domain superfamily AL543_12555 8b7e457a356dc808a8b09b0f3eb75097 316 Gene3D G3DSA:3.40.1010.20 6 283 6.1E-107 T 11-10-2018 AL543_12555 8b7e457a356dc808a8b09b0f3eb75097 316 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 288 37.599 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 AL543_12555 8b7e457a356dc808a8b09b0f3eb75097 316 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 286 3.9E-96 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 AL543_12555 8b7e457a356dc808a8b09b0f3eb75097 316 Gene3D G3DSA:3.40.50.11270 12 96 6.1E-107 T 11-10-2018 AL543_12555 8b7e457a356dc808a8b09b0f3eb75097 316 Gene3D G3DSA:3.40.1010.20 97 198 6.1E-107 T 11-10-2018 AL543_12555 8b7e457a356dc808a8b09b0f3eb75097 316 Pfam PF02401 LytB protein 3 284 2.2E-91 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 AL543_03790 c462ecaf4cf490ba07cc09300a2ac4c9 207 SMART SM00421 144 201 3.6E-22 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_03790 c462ecaf4cf490ba07cc09300a2ac4c9 207 Pfam PF00196 Bacterial regulatory proteins, luxR family 146 200 4.6E-21 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_03790 c462ecaf4cf490ba07cc09300a2ac4c9 207 SUPERFAMILY SSF46894 130 203 2.93E-20 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL543_03790 c462ecaf4cf490ba07cc09300a2ac4c9 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 177 1.1E-13 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_03790 c462ecaf4cf490ba07cc09300a2ac4c9 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 189 1.1E-13 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_03790 c462ecaf4cf490ba07cc09300a2ac4c9 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 147 161 1.1E-13 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_03790 c462ecaf4cf490ba07cc09300a2ac4c9 207 Pfam PF00072 Response regulator receiver domain 5 116 6.9E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_03790 c462ecaf4cf490ba07cc09300a2ac4c9 207 ProSitePatterns PS00622 LuxR-type HTH domain signature. 161 188 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_03790 c462ecaf4cf490ba07cc09300a2ac4c9 207 Gene3D G3DSA:3.40.50.12740 3 205 1.2E-65 T 11-10-2018 AL543_03790 c462ecaf4cf490ba07cc09300a2ac4c9 207 SMART SM00448 3 116 4.3E-33 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_03790 c462ecaf4cf490ba07cc09300a2ac4c9 207 SUPERFAMILY SSF52172 2 134 1.15E-35 T 11-10-2018 IPR011006 CheY-like superfamily AL543_00625 67046fcfb4a4ae41efe37362f0c7d7a1 524 Pfam PF14785 Maltose transport system permease protein MalF P2 domain 110 270 3.1E-58 T 11-10-2018 IPR029345 Maltose transport system permease protein MalF, P2 domain AL543_00625 67046fcfb4a4ae41efe37362f0c7d7a1 524 SUPERFAMILY SSF161098 273 513 1.57E-56 T 11-10-2018 IPR035906 MetI-like superfamily AL543_00625 67046fcfb4a4ae41efe37362f0c7d7a1 524 SUPERFAMILY SSF160964 24 270 4.84E-81 T 11-10-2018 AL543_00625 67046fcfb4a4ae41efe37362f0c7d7a1 524 Gene3D G3DSA:3.10.650.10 108 278 2.6E-55 T 11-10-2018 AL543_00625 67046fcfb4a4ae41efe37362f0c7d7a1 524 Gene3D G3DSA:2.40.430.10 128 214 2.6E-55 T 11-10-2018 AL543_00625 67046fcfb4a4ae41efe37362f0c7d7a1 524 Gene3D G3DSA:1.20.58.370 14 105 3.9E-34 T 11-10-2018 IPR035277 MalF, N-terminal AL543_00625 67046fcfb4a4ae41efe37362f0c7d7a1 524 Gene3D G3DSA:1.10.3720.10 280 522 8.1E-69 T 11-10-2018 IPR035906 MetI-like superfamily AL543_00625 67046fcfb4a4ae41efe37362f0c7d7a1 524 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 307 512 1.5E-16 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL543_09670 3045386b1cda53116f5335417a1cd561 94 Gene3D G3DSA:3.30.70.260 1 89 1.9E-11 T 11-10-2018 AL543_09670 3045386b1cda53116f5335417a1cd561 94 SUPERFAMILY SSF55021 3 75 6.41E-10 T 11-10-2018 AL543_09670 3045386b1cda53116f5335417a1cd561 94 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 2 70 7.0E-4 T 11-10-2018 AL543_09670 3045386b1cda53116f5335417a1cd561 94 Pfam PF13710 ACT domain 12 73 4.8E-21 T 11-10-2018 AL543_10415 009adb649535508a637929cee79b8c8d 520 Gene3D G3DSA:1.10.10.10 5 106 2.1E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_10415 009adb649535508a637929cee79b8c8d 520 SMART SM00862 24 100 2.0E-12 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL543_10415 009adb649535508a637929cee79b8c8d 520 Pfam PF00486 Transcriptional regulatory protein, C terminal 25 100 1.4E-15 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL543_10415 009adb649535508a637929cee79b8c8d 520 SUPERFAMILY SSF46894 6 103 7.37E-17 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL543_10415 009adb649535508a637929cee79b8c8d 520 Gene3D G3DSA:1.25.40.10 351 512 4.2E-20 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_12150 a9eec6bcff99495ad3ee30364f8175bf 337 Gene3D G3DSA:3.40.190.10 120 328 1.2E-121 T 11-10-2018 AL543_12150 a9eec6bcff99495ad3ee30364f8175bf 337 Gene3D G3DSA:3.40.190.10 25 297 1.2E-121 T 11-10-2018 AL543_12150 a9eec6bcff99495ad3ee30364f8175bf 337 PIRSF PIRSF002825 1 337 1.9E-96 T 11-10-2018 IPR026045 Ferric binding protein AL543_12150 a9eec6bcff99495ad3ee30364f8175bf 337 Pfam PF13343 Bacterial extracellular solute-binding protein 73 295 2.7E-18 T 11-10-2018 AL543_12150 a9eec6bcff99495ad3ee30364f8175bf 337 SUPERFAMILY SSF53850 23 334 1.27E-73 T 11-10-2018 AL543_16210 2b2e34d8a1278cfd528d4738c00ade63 393 SUPERFAMILY SSF55073 236 386 1.1E-42 T 11-10-2018 IPR029787 Nucleotide cyclase AL543_16210 2b2e34d8a1278cfd528d4738c00ade63 393 Gene3D G3DSA:3.30.70.270 232 392 1.6E-48 T 11-10-2018 AL543_16210 2b2e34d8a1278cfd528d4738c00ade63 393 SMART SM00267 217 387 3.0E-41 T 11-10-2018 IPR000160 GGDEF domain AL543_16210 2b2e34d8a1278cfd528d4738c00ade63 393 Pfam PF00990 Diguanylate cyclase, GGDEF domain 232 383 7.1E-38 T 11-10-2018 IPR000160 GGDEF domain AL543_16210 2b2e34d8a1278cfd528d4738c00ade63 393 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 230 386 1.3E-38 T 11-10-2018 IPR000160 GGDEF domain AL543_02875 e8ae66bab76693358e29e0277fe2211a 300 Pfam PF13580 SIS domain 47 166 1.9E-10 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL543_02875 e8ae66bab76693358e29e0277fe2211a 300 SUPERFAMILY SSF53697 8 249 1.88E-62 T 11-10-2018 AL543_02875 e8ae66bab76693358e29e0277fe2211a 300 Gene3D G3DSA:1.10.8.1080 220 296 2.7E-18 T 11-10-2018 AL543_02875 e8ae66bab76693358e29e0277fe2211a 300 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 3 296 36.768 T 11-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 AL543_02875 e8ae66bab76693358e29e0277fe2211a 300 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 10 281 7.8E-104 T 11-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 AL543_02875 e8ae66bab76693358e29e0277fe2211a 300 Gene3D G3DSA:3.40.50.10490 3 219 6.9E-68 T 11-10-2018 AL543_02875 e8ae66bab76693358e29e0277fe2211a 300 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 186 203 - T 11-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 AL543_10265 fcd9ed25a283e6302ce63140b692cdb9 262 Pfam PF04488 Glycosyltransferase sugar-binding region containing DXD motif 73 156 5.3E-18 T 11-10-2018 IPR007577 Glycosyltransferase, DXD sugar-binding motif AL543_10265 fcd9ed25a283e6302ce63140b692cdb9 262 Gene3D G3DSA:3.90.550.20 74 232 6.9E-16 T 11-10-2018 AL543_10265 fcd9ed25a283e6302ce63140b692cdb9 262 SUPERFAMILY SSF53448 16 260 2.25E-35 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL543_07400 b97a526213cd0f1d26ba4cea575f20c4 245 SUPERFAMILY SSF55120 14 220 2.08E-63 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL543_07400 b97a526213cd0f1d26ba4cea575f20c4 245 Pfam PF00849 RNA pseudouridylate synthase 22 168 8.6E-28 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL543_07400 b97a526213cd0f1d26ba4cea575f20c4 245 Gene3D G3DSA:3.30.2350.10 4 216 5.9E-68 T 11-10-2018 AL543_07400 b97a526213cd0f1d26ba4cea575f20c4 245 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 60 74 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL543_10065 ff3266cf2f6ad0f60d9d06256547301e 267 SUPERFAMILY SSF51215 24 142 1.28E-16 T 11-10-2018 IPR037923 Transcription regulator HTH-like AL543_10065 ff3266cf2f6ad0f60d9d06256547301e 267 Gene3D G3DSA:2.60.120.10 19 99 2.7E-5 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL543_10065 ff3266cf2f6ad0f60d9d06256547301e 267 Gene3D G3DSA:1.10.10.60 169 224 1.6E-16 T 11-10-2018 AL543_10065 ff3266cf2f6ad0f60d9d06256547301e 267 Gene3D G3DSA:1.10.10.60 225 266 6.2E-11 T 11-10-2018 AL543_10065 ff3266cf2f6ad0f60d9d06256547301e 267 SMART SM00342 182 264 1.0E-28 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL543_10065 ff3266cf2f6ad0f60d9d06256547301e 267 SUPERFAMILY SSF46689 168 216 4.12E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_10065 ff3266cf2f6ad0f60d9d06256547301e 267 SUPERFAMILY SSF46689 218 263 6.45E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_10065 ff3266cf2f6ad0f60d9d06256547301e 267 Pfam PF02311 AraC-like ligand binding domain 11 143 1.7E-24 T 11-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AL543_10065 ff3266cf2f6ad0f60d9d06256547301e 267 Pfam PF12833 Helix-turn-helix domain 188 261 1.1E-23 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL543_05195 46686c9e9c69949fb36c049a201951d8 158 Gene3D G3DSA:3.40.630.30 1 156 2.7E-27 T 11-10-2018 AL543_05195 46686c9e9c69949fb36c049a201951d8 158 SUPERFAMILY SSF55729 3 151 2.3E-26 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL543_05195 46686c9e9c69949fb36c049a201951d8 158 Pfam PF13673 Acetyltransferase (GNAT) domain 36 146 4.4E-16 T 11-10-2018 IPR000182 GNAT domain AL543_09255 8e0334a5f9a5edbacef84278394a7563 68 SUPERFAMILY SSF54285 4 68 9.74E-15 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AL543_09255 8e0334a5f9a5edbacef84278394a7563 68 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 5 68 1.4E-16 T 11-10-2018 IPR010035 ThiS, thiamine-biosynthesis AL543_09255 8e0334a5f9a5edbacef84278394a7563 68 Gene3D G3DSA:3.10.20.30 3 68 3.7E-18 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AL543_09255 8e0334a5f9a5edbacef84278394a7563 68 Pfam PF02597 ThiS family 7 68 3.6E-12 T 11-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 AL543_15225 b8e3f4393865970279f668f9413e0af1 219 Pfam PF10014 2OG-Fe dioxygenase 25 209 1.3E-50 T 11-10-2018 IPR018724 2OG-Fe dioxygenase AL543_15225 b8e3f4393865970279f668f9413e0af1 219 Gene3D G3DSA:2.60.120.620 1 216 1.7E-49 T 11-10-2018 AL543_00260 4d16a64d76b27b6d9a182416a6be4493 272 TIGRFAM TIGR02642 phage_xxxx: uncharacterized phage protein 3 271 2.2E-68 T 11-10-2018 IPR013464 Conserved hypothetical protein CHP02642 AL543_00655 b10e326f1f232a0b392e8432820e722e 106 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 105 25.167 T 11-10-2018 IPR002765 Uncharacterised protein family UPF0145 AL543_00655 b10e326f1f232a0b392e8432820e722e 106 SUPERFAMILY SSF117782 1 106 1.96E-38 T 11-10-2018 IPR035439 UPF0145 domain superfamily AL543_00655 b10e326f1f232a0b392e8432820e722e 106 Pfam PF01906 Putative heavy-metal-binding 1 105 3.4E-41 T 11-10-2018 IPR002765 Uncharacterised protein family UPF0145 AL543_00655 b10e326f1f232a0b392e8432820e722e 106 Gene3D G3DSA:3.30.110.70 2 106 3.3E-44 T 11-10-2018 AL543_02075 4f7ac1d6b163b2c0e7b46245fa51dcc6 168 PIRSF PIRSF028301 1 168 3.0E-62 T 11-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AL543_02075 4f7ac1d6b163b2c0e7b46245fa51dcc6 168 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 3 158 6.7E-58 T 11-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AL543_02075 4f7ac1d6b163b2c0e7b46245fa51dcc6 168 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 6 157 1.0E-56 T 11-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AL543_20545 1adce79397e4cbd5a4eca0d8b882993a 281 SUPERFAMILY SSF56219 59 275 5.63E-25 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AL543_20545 1adce79397e4cbd5a4eca0d8b882993a 281 Gene3D G3DSA:3.60.10.10 60 281 4.2E-21 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AL543_20545 1adce79397e4cbd5a4eca0d8b882993a 281 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 66 270 5.3E-9 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL543_20545 1adce79397e4cbd5a4eca0d8b882993a 281 Hamap MF_01119 UPF0294 protein YafD [yafD]. 1 278 54.675 T 11-10-2018 IPR022958 Uncharacterised protein family UPF0294 AL543_04250 c7a71130d0e1ecdd5d5c0486ff940428 295 Gene3D G3DSA:3.40.190.10 139 276 1.9E-9 T 11-10-2018 AL543_04250 c7a71130d0e1ecdd5d5c0486ff940428 295 SUPERFAMILY SSF53850 122 292 5.97E-20 T 11-10-2018 AL543_04250 c7a71130d0e1ecdd5d5c0486ff940428 295 Gene3D G3DSA:3.40.190.10 169 264 1.9E-9 T 11-10-2018 AL543_04250 c7a71130d0e1ecdd5d5c0486ff940428 295 SUPERFAMILY SSF46785 4 84 6.35E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_04250 c7a71130d0e1ecdd5d5c0486ff940428 295 Pfam PF03466 LysR substrate binding domain 124 291 1.7E-17 T 11-10-2018 IPR005119 LysR, substrate-binding AL543_04250 c7a71130d0e1ecdd5d5c0486ff940428 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 1.1E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_04250 c7a71130d0e1ecdd5d5c0486ff940428 295 Gene3D G3DSA:1.10.10.10 5 90 1.1E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_07345 26cfe291fe98e085010237b1eec675e6 160 Pfam PF06271 RDD family 11 150 2.6E-22 T 11-10-2018 IPR010432 RDD AL543_14825 b61cde9bbfe4c373f838c7e687440fa9 264 Pfam PF00005 ABC transporter 22 177 1.9E-23 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_14825 b61cde9bbfe4c373f838c7e687440fa9 264 SUPERFAMILY SSF52540 2 231 1.87E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_14825 b61cde9bbfe4c373f838c7e687440fa9 264 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_14825 b61cde9bbfe4c373f838c7e687440fa9 264 SMART SM00382 31 226 6.4E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_14825 b61cde9bbfe4c373f838c7e687440fa9 264 Gene3D G3DSA:3.40.50.300 1 248 4.5E-52 T 11-10-2018 AL543_18895 4bfd1585b9a22b14fb191ce641a88f5a 433 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 9.3E-44 T 11-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 AL543_18895 4bfd1585b9a22b14fb191ce641a88f5a 433 Gene3D G3DSA:3.10.50.40 150 246 4.0E-106 T 11-10-2018 AL543_18895 4bfd1585b9a22b14fb191ce641a88f5a 433 Hamap MF_00303 Trigger factor [tig]. 1 418 21.789 T 11-10-2018 IPR005215 Trigger factor GO:0015031 AL543_18895 4bfd1585b9a22b14fb191ce641a88f5a 433 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 156 235 5.7E-13 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AL543_18895 4bfd1585b9a22b14fb191ce641a88f5a 433 PIRSF PIRSF003095 1 432 2.4E-127 T 11-10-2018 IPR005215 Trigger factor GO:0015031 AL543_18895 4bfd1585b9a22b14fb191ce641a88f5a 433 TIGRFAM TIGR00115 tig: trigger factor 11 412 5.2E-143 T 11-10-2018 IPR005215 Trigger factor GO:0015031 AL543_18895 4bfd1585b9a22b14fb191ce641a88f5a 433 Gene3D G3DSA:3.30.70.1050 1 115 8.7E-42 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 AL543_18895 4bfd1585b9a22b14fb191ce641a88f5a 433 SUPERFAMILY SSF54534 90 241 4.71E-37 T 11-10-2018 AL543_18895 4bfd1585b9a22b14fb191ce641a88f5a 433 SUPERFAMILY SSF102735 1 130 6.54E-42 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 AL543_18895 4bfd1585b9a22b14fb191ce641a88f5a 433 SUPERFAMILY SSF109998 248 430 5.62E-50 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily AL543_18895 4bfd1585b9a22b14fb191ce641a88f5a 433 Gene3D G3DSA:1.10.3120.10 116 417 4.0E-106 T 11-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 AL543_18895 4bfd1585b9a22b14fb191ce641a88f5a 433 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 412 2.3E-39 T 11-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 AL543_09310 921cc43642654fbce368a2be66329031 459 Gene3D G3DSA:3.30.1360.60 376 455 6.3E-19 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AL543_09310 921cc43642654fbce368a2be66329031 459 Pfam PF00367 phosphotransferase system, EIIB 384 409 1.1E-8 T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL543_09310 921cc43642654fbce368a2be66329031 459 SUPERFAMILY SSF55604 380 452 3.14E-16 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AL543_09310 921cc43642654fbce368a2be66329031 459 Pfam PF02378 Phosphotransferase system, EIIC 9 297 6.7E-65 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL543_21285 6f4045ab41e568f9e08436d5b98f8312 49 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 1.0E-15 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL543_01605 fa1e68f5fbef56a75089121bc9ef92bb 259 Gene3D G3DSA:3.40.50.300 14 256 4.2E-63 T 11-10-2018 AL543_01605 fa1e68f5fbef56a75089121bc9ef92bb 259 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 14 259 3.0E-126 T 11-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 AL543_01605 fa1e68f5fbef56a75089121bc9ef92bb 259 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_01605 fa1e68f5fbef56a75089121bc9ef92bb 259 SUPERFAMILY SSF52540 10 246 1.77E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_01605 fa1e68f5fbef56a75089121bc9ef92bb 259 Pfam PF00005 ABC transporter 29 184 2.0E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_01605 fa1e68f5fbef56a75089121bc9ef92bb 259 SMART SM00382 38 230 8.1E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_16185 db563855dbc8e9f1ea066eb4641ec22a 647 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 476 633 3.0E-20 T 11-10-2018 IPR000160 GGDEF domain AL543_16185 db563855dbc8e9f1ea066eb4641ec22a 647 Gene3D G3DSA:1.25.40.10 283 452 2.3E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_16185 db563855dbc8e9f1ea066eb4641ec22a 647 Gene3D G3DSA:1.25.40.10 72 282 9.7E-18 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_16185 db563855dbc8e9f1ea066eb4641ec22a 647 SMART SM00267 465 635 4.2E-13 T 11-10-2018 IPR000160 GGDEF domain AL543_16185 db563855dbc8e9f1ea066eb4641ec22a 647 Gene3D G3DSA:3.30.70.270 472 637 8.7E-25 T 11-10-2018 AL543_16185 db563855dbc8e9f1ea066eb4641ec22a 647 SUPERFAMILY SSF55073 483 633 4.0E-22 T 11-10-2018 IPR029787 Nucleotide cyclase AL543_16185 db563855dbc8e9f1ea066eb4641ec22a 647 Pfam PF13181 Tetratricopeptide repeat 331 360 0.013 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL543_16185 db563855dbc8e9f1ea066eb4641ec22a 647 Pfam PF00990 Diguanylate cyclase, GGDEF domain 478 629 6.9E-20 T 11-10-2018 IPR000160 GGDEF domain AL543_16185 db563855dbc8e9f1ea066eb4641ec22a 647 Pfam PF13424 Tetratricopeptide repeat 175 239 7.7E-8 T 11-10-2018 AL543_16185 db563855dbc8e9f1ea066eb4641ec22a 647 SMART SM00028 209 242 12.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL543_16185 db563855dbc8e9f1ea066eb4641ec22a 647 SMART SM00028 249 282 4.1 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL543_16185 db563855dbc8e9f1ea066eb4641ec22a 647 SMART SM00028 369 402 69.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL543_16185 db563855dbc8e9f1ea066eb4641ec22a 647 SMART SM00028 289 322 22.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL543_16185 db563855dbc8e9f1ea066eb4641ec22a 647 SMART SM00028 329 362 2.2 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL543_16185 db563855dbc8e9f1ea066eb4641ec22a 647 SMART SM00028 172 205 28.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL543_16185 db563855dbc8e9f1ea066eb4641ec22a 647 SUPERFAMILY SSF48452 175 325 7.36E-21 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_16185 db563855dbc8e9f1ea066eb4641ec22a 647 SUPERFAMILY SSF48452 288 398 1.39E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_05985 a04c2164dfdb5ad4822e5b0b59c2fa2d 248 Pfam PF17131 Outer membrane lipoprotein-sorting protein 69 240 2.1E-34 T 11-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein AL543_05985 a04c2164dfdb5ad4822e5b0b59c2fa2d 248 PIRSF PIRSF028205 1 245 4.0E-103 T 11-10-2018 IPR011220 Uncharacterised conserved protein UCP028205 AL543_05985 a04c2164dfdb5ad4822e5b0b59c2fa2d 248 Gene3D G3DSA:2.50.20.10 18 242 3.3E-38 T 11-10-2018 AL543_09425 c7b048e3dcde29bd0bda84537224cb45 211 Pfam PF09186 Domain of unknown function (DUF1949) 143 196 9.0E-12 T 11-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal AL543_09425 c7b048e3dcde29bd0bda84537224cb45 211 Pfam PF01205 Uncharacterized protein family UPF0029 20 127 4.7E-25 T 11-10-2018 IPR001498 Impact, N-terminal AL543_09425 c7b048e3dcde29bd0bda84537224cb45 211 SUPERFAMILY SSF54211 4 134 6.83E-43 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL543_09425 c7b048e3dcde29bd0bda84537224cb45 211 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 4 201 4.6E-67 T 11-10-2018 IPR015796 Impact family, bacterial/archaeal AL543_09425 c7b048e3dcde29bd0bda84537224cb45 211 Gene3D G3DSA:3.30.230.30 1 136 1.0E-48 T 11-10-2018 IPR036956 Impact, N-terminal domain superfamily AL543_09425 c7b048e3dcde29bd0bda84537224cb45 211 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 82 111 - T 11-10-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site AL543_09425 c7b048e3dcde29bd0bda84537224cb45 211 SUPERFAMILY SSF54980 138 201 2.09E-9 T 11-10-2018 IPR035647 EF-G domain III/V-like AL543_08325 b09417e56d0810dae68da58049170fa9 435 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 367 1.0E-143 T 11-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AL543_08325 b09417e56d0810dae68da58049170fa9 435 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 434 6.1E-179 T 11-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AL543_08325 b09417e56d0810dae68da58049170fa9 435 PIRSF PIRSF004539 1 435 1.4E-178 T 11-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AL543_12990 9ddf95b59fef5add5248a94a2a21ef9f 429 Gene3D G3DSA:3.40.630.10 90 429 1.2E-106 T 11-10-2018 AL543_12990 9ddf95b59fef5add5248a94a2a21ef9f 429 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 275 282 - T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AL543_12990 9ddf95b59fef5add5248a94a2a21ef9f 429 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 109 421 1.4E-102 T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AL543_12990 9ddf95b59fef5add5248a94a2a21ef9f 429 PRINTS PR00481 Cytosol aminopeptidase signature 212 233 9.0E-46 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AL543_12990 9ddf95b59fef5add5248a94a2a21ef9f 429 PRINTS PR00481 Cytosol aminopeptidase signature 249 270 9.0E-46 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AL543_12990 9ddf95b59fef5add5248a94a2a21ef9f 429 PRINTS PR00481 Cytosol aminopeptidase signature 271 291 9.0E-46 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AL543_12990 9ddf95b59fef5add5248a94a2a21ef9f 429 PRINTS PR00481 Cytosol aminopeptidase signature 190 207 9.0E-46 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AL543_12990 9ddf95b59fef5add5248a94a2a21ef9f 429 PRINTS PR00481 Cytosol aminopeptidase signature 299 314 9.0E-46 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AL543_12990 9ddf95b59fef5add5248a94a2a21ef9f 429 PIRSF PIRSF036388 1 429 3.2E-236 T 11-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 AL543_12990 9ddf95b59fef5add5248a94a2a21ef9f 429 Pfam PF12404 Peptidase 5 81 2.9E-34 T 11-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 AL543_12990 9ddf95b59fef5add5248a94a2a21ef9f 429 Hamap MF_00504 Peptidase B [pepB]. 3 427 65.304 T 11-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 AL543_12990 9ddf95b59fef5add5248a94a2a21ef9f 429 SUPERFAMILY SSF53187 104 427 1.98E-101 T 11-10-2018 AL543_06590 46f46011a23514568b3a949b50d45526 257 Pfam PF03883 Peroxide stress protein YaaA 1 243 3.1E-93 T 11-10-2018 IPR005583 Peroxide stress protein YaaA AL543_06590 46f46011a23514568b3a949b50d45526 257 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 38.798 T 11-10-2018 IPR005583 Peroxide stress protein YaaA AL543_11160 0153e936a0fd2dd54613287a546c4f8b 281 Gene3D G3DSA:3.40.50.300 30 183 7.7E-13 T 11-10-2018 AL543_11160 0153e936a0fd2dd54613287a546c4f8b 281 SUPERFAMILY SSF52540 5 260 2.06E-25 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_11160 0153e936a0fd2dd54613287a546c4f8b 281 Pfam PF13401 AAA domain 42 168 2.0E-22 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_18905 6c64a1c686fe46380b63cccf2188a31d 597 Gene3D G3DSA:1.10.287.130 349 436 2.5E-20 T 11-10-2018 AL543_18905 6c64a1c686fe46380b63cccf2188a31d 597 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 486 590 2.6E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_18905 6c64a1c686fe46380b63cccf2188a31d 597 SMART SM00388 373 441 5.5E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_18905 6c64a1c686fe46380b63cccf2188a31d 597 PIRSF PIRSF036431 1 595 4.4E-190 T 11-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) AL543_18905 6c64a1c686fe46380b63cccf2188a31d 597 PRINTS PR00344 Bacterial sensor protein C-terminal signature 523 537 8.2E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_18905 6c64a1c686fe46380b63cccf2188a31d 597 PRINTS PR00344 Bacterial sensor protein C-terminal signature 552 570 8.2E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_18905 6c64a1c686fe46380b63cccf2188a31d 597 PRINTS PR00344 Bacterial sensor protein C-terminal signature 576 589 8.2E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_18905 6c64a1c686fe46380b63cccf2188a31d 597 PRINTS PR00344 Bacterial sensor protein C-terminal signature 541 551 8.2E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_18905 6c64a1c686fe46380b63cccf2188a31d 597 Pfam PF02743 Cache domain 36 241 6.0E-12 T 11-10-2018 IPR033479 Double Cache domain 1 AL543_18905 6c64a1c686fe46380b63cccf2188a31d 597 SMART SM00387 484 592 2.5E-27 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_18905 6c64a1c686fe46380b63cccf2188a31d 597 SUPERFAMILY SSF55874 437 590 3.93E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_18905 6c64a1c686fe46380b63cccf2188a31d 597 Gene3D G3DSA:3.30.450.20 174 284 2.0E-41 T 11-10-2018 AL543_18905 6c64a1c686fe46380b63cccf2188a31d 597 Gene3D G3DSA:3.30.450.20 27 56 2.9E-10 T 11-10-2018 AL543_18905 6c64a1c686fe46380b63cccf2188a31d 597 Gene3D G3DSA:3.30.450.20 57 173 6.5E-37 T 11-10-2018 AL543_18905 6c64a1c686fe46380b63cccf2188a31d 597 SUPERFAMILY SSF103190 48 187 1.92E-30 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily AL543_18905 6c64a1c686fe46380b63cccf2188a31d 597 Gene3D G3DSA:3.30.565.10 440 592 1.8E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_18905 6c64a1c686fe46380b63cccf2188a31d 597 SUPERFAMILY SSF47384 359 439 5.49E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL543_18905 6c64a1c686fe46380b63cccf2188a31d 597 Pfam PF00512 His Kinase A (phospho-acceptor) domain 374 438 1.2E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_01775 eb636d8dee3b7e30fe032314f7cb6503 208 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 36 45 - T 11-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AL543_01775 eb636d8dee3b7e30fe032314f7cb6503 208 Pfam PF01081 KDPG and KHG aldolase 4 198 3.6E-79 T 11-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AL543_01775 eb636d8dee3b7e30fe032314f7cb6503 208 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 124 137 - T 11-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AL543_01775 eb636d8dee3b7e30fe032314f7cb6503 208 SUPERFAMILY SSF51569 4 207 7.51E-68 T 11-10-2018 AL543_01775 eb636d8dee3b7e30fe032314f7cb6503 208 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 5 206 3.9E-83 T 11-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AL543_01775 eb636d8dee3b7e30fe032314f7cb6503 208 Gene3D G3DSA:3.20.20.70 1 208 4.0E-76 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_05995 e6da980859f37fb98c59147bbe6769e0 227 SUPERFAMILY SSF52540 1 219 4.37E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_05995 e6da980859f37fb98c59147bbe6769e0 227 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_05995 e6da980859f37fb98c59147bbe6769e0 227 Pfam PF00005 ABC transporter 21 169 7.9E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_05995 e6da980859f37fb98c59147bbe6769e0 227 SMART SM00382 30 216 7.0E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_05995 e6da980859f37fb98c59147bbe6769e0 227 Gene3D G3DSA:3.40.50.300 1 224 1.6E-64 T 11-10-2018 AL543_19970 20c71cc4afda3f8c04dc421c8575e251 478 Pfam PF00072 Response regulator receiver domain 6 115 7.2E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_19970 20c71cc4afda3f8c04dc421c8575e251 478 Pfam PF02954 Bacterial regulatory protein, Fis family 429 468 6.2E-13 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL543_19970 20c71cc4afda3f8c04dc421c8575e251 478 Gene3D G3DSA:1.10.10.60 414 475 2.6E-9 T 11-10-2018 AL543_19970 20c71cc4afda3f8c04dc421c8575e251 478 SUPERFAMILY SSF52172 3 173 1.99E-39 T 11-10-2018 IPR011006 CheY-like superfamily AL543_19970 20c71cc4afda3f8c04dc421c8575e251 478 SUPERFAMILY SSF46689 342 469 1.16E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_19970 20c71cc4afda3f8c04dc421c8575e251 478 Pfam PF00158 Sigma-54 interaction domain 135 295 1.7E-65 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL543_19970 20c71cc4afda3f8c04dc421c8575e251 478 Gene3D G3DSA:3.40.50.2300 1 119 2.5E-33 T 11-10-2018 AL543_19970 20c71cc4afda3f8c04dc421c8575e251 478 SUPERFAMILY SSF52540 138 370 4.09E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_19970 20c71cc4afda3f8c04dc421c8575e251 478 SMART SM00382 149 296 3.2E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_19970 20c71cc4afda3f8c04dc421c8575e251 478 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 342 351 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AL543_19970 20c71cc4afda3f8c04dc421c8575e251 478 Gene3D G3DSA:1.10.8.60 301 379 3.5E-32 T 11-10-2018 AL543_19970 20c71cc4afda3f8c04dc421c8575e251 478 SMART SM00448 4 115 2.4E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_19970 20c71cc4afda3f8c04dc421c8575e251 478 Gene3D G3DSA:3.40.50.300 120 300 5.6E-65 T 11-10-2018 AL543_19970 20c71cc4afda3f8c04dc421c8575e251 478 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 215 230 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL543_17125 96acf32d28d568666bbb30d9a1ee2b56 72 Pfam PF00462 Glutaredoxin 3 61 1.1E-13 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AL543_17125 96acf32d28d568666bbb30d9a1ee2b56 72 SUPERFAMILY SSF52833 1 69 1.74E-18 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL543_17125 96acf32d28d568666bbb30d9a1ee2b56 72 TIGRFAM TIGR02194 GlrX_NrdH: glutaredoxin-like protein NrdH 3 72 5.6E-31 T 11-10-2018 IPR011909 Glutaredoxin-like protein NrdH GO:0045454 AL543_17125 96acf32d28d568666bbb30d9a1ee2b56 72 Gene3D G3DSA:3.40.30.10 1 72 1.3E-26 T 11-10-2018 AL543_03325 f1ab4ae5184f00d5b24de6b08c5e6dc9 344 SUPERFAMILY SSF51230 222 257 3.0E-5 T 11-10-2018 IPR011053 Single hybrid motif AL543_03325 f1ab4ae5184f00d5b24de6b08c5e6dc9 344 Gene3D G3DSA:2.40.50.100 69 260 1.4E-17 T 11-10-2018 AL543_03325 f1ab4ae5184f00d5b24de6b08c5e6dc9 344 Pfam PF13437 HlyD family secretion protein 226 301 1.1E-9 T 11-10-2018 AL543_03325 f1ab4ae5184f00d5b24de6b08c5e6dc9 344 Gene3D G3DSA:2.40.30.170 67 302 1.4E-17 T 11-10-2018 AL543_03325 f1ab4ae5184f00d5b24de6b08c5e6dc9 344 Gene3D G3DSA:1.10.287.470 103 225 1.4E-17 T 11-10-2018 AL543_08110 0cc079f68cf3e627d1bfac29e09bc1ca 144 SMART SM00450 40 138 5.9E-19 T 11-10-2018 IPR001763 Rhodanese-like domain AL543_08110 0cc079f68cf3e627d1bfac29e09bc1ca 144 Pfam PF00581 Rhodanese-like domain 42 135 1.7E-16 T 11-10-2018 IPR001763 Rhodanese-like domain AL543_08110 0cc079f68cf3e627d1bfac29e09bc1ca 144 SUPERFAMILY SSF52821 15 143 2.62E-29 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AL543_08110 0cc079f68cf3e627d1bfac29e09bc1ca 144 Gene3D G3DSA:3.40.250.10 22 143 2.6E-24 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AL543_14945 8814fbbdc11e50889afa0670f3b739a6 372 Gene3D G3DSA:3.40.50.620 2 220 8.8E-96 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL543_14945 8814fbbdc11e50889afa0670f3b739a6 372 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 12 369 40.266 T 11-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 AL543_14945 8814fbbdc11e50889afa0670f3b739a6 372 Gene3D G3DSA:2.30.30.280 221 288 2.7E-27 T 11-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 AL543_14945 8814fbbdc11e50889afa0670f3b739a6 372 SUPERFAMILY SSF52402 10 252 7.28E-58 T 11-10-2018 AL543_14945 8814fbbdc11e50889afa0670f3b739a6 372 Pfam PF03054 tRNA methyl transferase 12 368 4.4E-142 T 11-10-2018 AL543_14945 8814fbbdc11e50889afa0670f3b739a6 372 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 12 368 6.9E-151 T 11-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 AL543_14945 8814fbbdc11e50889afa0670f3b739a6 372 Gene3D G3DSA:2.40.30.10 290 372 1.3E-32 T 11-10-2018 AL543_20000 1413e42c5dd3fc87b433044966222edd 153 Pfam PF03646 FlaG protein 52 151 1.4E-25 T 11-10-2018 IPR005186 FlaG protein AL543_20000 1413e42c5dd3fc87b433044966222edd 153 SUPERFAMILY SSF160214 58 150 9.42E-23 T 11-10-2018 IPR035924 FlaG-like superfamily AL543_20000 1413e42c5dd3fc87b433044966222edd 153 Gene3D G3DSA:3.30.160.170 44 144 5.4E-15 T 11-10-2018 IPR035924 FlaG-like superfamily AL543_13800 9faf5b1af6532b7fbd966c1456db0da6 860 ProSitePatterns PS00018 EF-hand calcium-binding domain. 158 170 - T 11-10-2018 IPR018247 EF-Hand 1, calcium-binding site AL543_13800 9faf5b1af6532b7fbd966c1456db0da6 860 SUPERFAMILY SSF69318 155 390 3.31E-17 T 11-10-2018 AL543_13800 9faf5b1af6532b7fbd966c1456db0da6 860 Gene3D G3DSA:2.60.20.40 22 119 1.6E-42 T 11-10-2018 AL543_13800 9faf5b1af6532b7fbd966c1456db0da6 860 SUPERFAMILY SSF69318 536 673 4.45E-7 T 11-10-2018 AL543_13800 9faf5b1af6532b7fbd966c1456db0da6 860 Pfam PF16458 Beta-prism lectin 725 858 4.4E-52 T 11-10-2018 IPR032496 Hemolysin, beta-prism lectin AL543_13800 9faf5b1af6532b7fbd966c1456db0da6 860 Pfam PF16458 Beta-prism lectin 411 539 9.4E-53 T 11-10-2018 IPR032496 Hemolysin, beta-prism lectin AL543_13800 9faf5b1af6532b7fbd966c1456db0da6 860 Gene3D G3DSA:2.100.10.30 723 860 1.4E-34 T 11-10-2018 IPR036404 Jacalin-like lectin domain superfamily AL543_13800 9faf5b1af6532b7fbd966c1456db0da6 860 Gene3D G3DSA:2.100.10.30 407 542 1.7E-35 T 11-10-2018 IPR036404 Jacalin-like lectin domain superfamily AL543_05875 13e42a16bc443aa281bc1e282be0b7fb 177 SUPERFAMILY SSF56925 25 177 8.11E-21 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AL543_05875 13e42a16bc443aa281bc1e282be0b7fb 177 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 90 113 2.2E-11 T 11-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 AL543_05875 13e42a16bc443aa281bc1e282be0b7fb 177 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 137 158 2.2E-11 T 11-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 AL543_05875 13e42a16bc443aa281bc1e282be0b7fb 177 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 44 56 2.2E-11 T 11-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 AL543_05875 13e42a16bc443aa281bc1e282be0b7fb 177 Gene3D G3DSA:2.40.160.20 23 177 2.5E-34 T 11-10-2018 AL543_05875 13e42a16bc443aa281bc1e282be0b7fb 177 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 169 177 - T 11-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 AL543_05875 13e42a16bc443aa281bc1e282be0b7fb 177 Pfam PF13505 Outer membrane protein beta-barrel domain 7 177 9.9E-14 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel AL543_11565 ac7614ead9f4c8a3410613053bede7f6 426 SUPERFAMILY SSF55174 326 420 2.75E-15 T 11-10-2018 AL543_11565 ac7614ead9f4c8a3410613053bede7f6 426 Gene3D G3DSA:3.10.290.10 331 423 3.4E-21 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AL543_11565 ac7614ead9f4c8a3410613053bede7f6 426 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 221 233 7.2E-31 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AL543_11565 ac7614ead9f4c8a3410613053bede7f6 426 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 167 182 7.2E-31 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AL543_11565 ac7614ead9f4c8a3410613053bede7f6 426 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 188 210 7.2E-31 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AL543_11565 ac7614ead9f4c8a3410613053bede7f6 426 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 45 67 7.2E-31 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AL543_11565 ac7614ead9f4c8a3410613053bede7f6 426 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 41 51 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL543_11565 ac7614ead9f4c8a3410613053bede7f6 426 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 4 421 43.126 T 11-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 AL543_11565 ac7614ead9f4c8a3410613053bede7f6 426 Gene3D G3DSA:1.10.240.10 228 330 1.2E-33 T 11-10-2018 AL543_11565 ac7614ead9f4c8a3410613053bede7f6 426 Pfam PF00579 tRNA synthetases class I (W and Y) 34 328 1.2E-80 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL543_11565 ac7614ead9f4c8a3410613053bede7f6 426 Pfam PF01479 S4 domain 360 391 2.3E-8 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_11565 ac7614ead9f4c8a3410613053bede7f6 426 SUPERFAMILY SSF52374 5 328 1.74E-97 T 11-10-2018 AL543_11565 ac7614ead9f4c8a3410613053bede7f6 426 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 3 420 4.9E-121 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AL543_11565 ac7614ead9f4c8a3410613053bede7f6 426 Gene3D G3DSA:3.40.50.620 1 227 7.5E-88 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL543_11565 ac7614ead9f4c8a3410613053bede7f6 426 SMART SM00363 358 422 0.0047 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_15570 ada483b2f61d1048331f360578d29682 92 SUPERFAMILY SSF54292 8 82 1.14E-19 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AL543_15570 ada483b2f61d1048331f360578d29682 92 Gene3D G3DSA:3.10.20.30 2 90 2.4E-16 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AL543_15570 ada483b2f61d1048331f360578d29682 92 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 35 43 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AL543_15570 ada483b2f61d1048331f360578d29682 92 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 74 1.9E-9 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL543_14695 55ce1e81de40e4ca7dcd2e5a5786669c 260 SMART SM00342 172 253 1.4E-19 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL543_14695 55ce1e81de40e4ca7dcd2e5a5786669c 260 Gene3D G3DSA:1.10.10.60 152 259 6.4E-23 T 11-10-2018 AL543_14695 55ce1e81de40e4ca7dcd2e5a5786669c 260 Pfam PF12833 Helix-turn-helix domain 179 254 5.7E-16 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL543_14695 55ce1e81de40e4ca7dcd2e5a5786669c 260 SUPERFAMILY SSF46689 207 255 5.38E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_14695 55ce1e81de40e4ca7dcd2e5a5786669c 260 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 208 249 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL543_20965 08c9fb62e618e3fbd2abc0a0b735e062 29 Pfam PF11665 Protein of unknown function (DUF3265) 2 29 1.2E-14 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL543_18550 e930e8bbbf2b3cf64fb4377ccbc1f977 176 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 22 164 4.8E-47 T 11-10-2018 IPR018639 Domain of unknown function DUF2062 AL543_01385 7381a9d3c7da996cf518df328a71c21f 700 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 41 508 2.1E-128 T 11-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein AL543_01385 7381a9d3c7da996cf518df328a71c21f 700 Gene3D G3DSA:3.30.1920.30 228 291 7.6E-83 T 11-10-2018 AL543_01385 7381a9d3c7da996cf518df328a71c21f 700 Gene3D G3DSA:2.30.110.50 14 336 7.6E-83 T 11-10-2018 AL543_01385 7381a9d3c7da996cf518df328a71c21f 700 Gene3D G3DSA:2.40.50.230 362 461 1.5E-40 T 11-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily AL543_01385 7381a9d3c7da996cf518df328a71c21f 700 SUPERFAMILY SSF69349 447 628 2.43E-51 T 11-10-2018 AL543_01385 7381a9d3c7da996cf518df328a71c21f 700 Pfam PF05954 Phage late control gene D protein (GPD) 41 334 1.3E-75 T 11-10-2018 AL543_01385 7381a9d3c7da996cf518df328a71c21f 700 SUPERFAMILY SSF69279 197 370 5.44E-46 T 11-10-2018 AL543_01385 7381a9d3c7da996cf518df328a71c21f 700 Gene3D G3DSA:3.55.50.10 104 195 7.6E-83 T 11-10-2018 AL543_01385 7381a9d3c7da996cf518df328a71c21f 700 SUPERFAMILY SSF69255 369 456 3.14E-32 T 11-10-2018 AL543_01385 7381a9d3c7da996cf518df328a71c21f 700 SUPERFAMILY SSF69279 7 190 7.37E-51 T 11-10-2018 AL543_01385 7381a9d3c7da996cf518df328a71c21f 700 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 12 526 5.2E-185 T 11-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset AL543_16695 7e7c0e0996b4e0c0c840a75960640996 172 SUPERFAMILY SSF54637 4 169 5.6E-56 T 11-10-2018 IPR029069 HotDog domain superfamily AL543_16695 7e7c0e0996b4e0c0c840a75960640996 172 Pfam PF07977 FabA-like domain 29 158 4.4E-54 T 11-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL543_16695 7e7c0e0996b4e0c0c840a75960640996 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 172 9.5E-92 T 11-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL543_16695 7e7c0e0996b4e0c0c840a75960640996 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 51.328 T 11-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL543_16695 7e7c0e0996b4e0c0c840a75960640996 172 Gene3D G3DSA:3.10.129.10 2 172 9.6E-65 T 11-10-2018 AL543_21395 51e171f6a1c098e873c714a88883047c 64 Pfam PF04875 Protein of unknown function, DUF645 31 64 3.7E-19 T 11-10-2018 IPR006959 Protein of unknown function DUF645 AL543_20815 51e171f6a1c098e873c714a88883047c 64 Pfam PF04875 Protein of unknown function, DUF645 31 64 3.7E-19 T 11-10-2018 IPR006959 Protein of unknown function DUF645 AL543_14105 18599caa81d52edb947394ee2803c4d9 524 Pfam PF00367 phosphotransferase system, EIIB 440 473 6.9E-13 T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL543_14105 18599caa81d52edb947394ee2803c4d9 524 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 411 498 8.2E-21 T 11-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AL543_14105 18599caa81d52edb947394ee2803c4d9 524 Gene3D G3DSA:3.30.1360.60 434 513 4.9E-24 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AL543_14105 18599caa81d52edb947394ee2803c4d9 524 Pfam PF02378 Phosphotransferase system, EIIC 11 353 1.1E-62 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL543_14105 18599caa81d52edb947394ee2803c4d9 524 SUPERFAMILY SSF55604 438 511 3.4E-19 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AL543_14105 18599caa81d52edb947394ee2803c4d9 524 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 509 1.3E-214 T 11-10-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 AL543_14105 18599caa81d52edb947394ee2803c4d9 524 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 451 468 - T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL543_14385 0386f74b8fb313ae318cd6bcaa1c4834 181 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 9 177 3.2E-74 T 11-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 AL543_14385 0386f74b8fb313ae318cd6bcaa1c4834 181 Pfam PF00156 Phosphoribosyl transferase domain 30 154 6.1E-15 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AL543_14385 0386f74b8fb313ae318cd6bcaa1c4834 181 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 9 178 38.345 T 11-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 AL543_14385 0386f74b8fb313ae318cd6bcaa1c4834 181 SUPERFAMILY SSF53271 11 178 6.96E-52 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AL543_14385 0386f74b8fb313ae318cd6bcaa1c4834 181 Gene3D G3DSA:3.40.50.2020 1 181 2.0E-67 T 11-10-2018 AL543_18530 6f36bd4320a1afde6ec57010eac69a97 59 Pfam PF03966 Trm112p-like protein 2 41 3.3E-11 T 11-10-2018 IPR005651 Trm112-like AL543_18530 6f36bd4320a1afde6ec57010eac69a97 59 SUPERFAMILY SSF158997 1 54 2.88E-20 T 11-10-2018 AL543_18530 6f36bd4320a1afde6ec57010eac69a97 59 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 27.381 T 11-10-2018 IPR038053 Uncharacterised protein family UPF0434 AL543_18530 6f36bd4320a1afde6ec57010eac69a97 59 Gene3D G3DSA:2.20.25.10 8 59 1.3E-23 T 11-10-2018 AL543_14415 1d3d4d31348b86edd17d0a9f11cf49b3 247 Pfam PF00106 short chain dehydrogenase 13 208 4.8E-50 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_14415 1d3d4d31348b86edd17d0a9f11cf49b3 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL543_14415 1d3d4d31348b86edd17d0a9f11cf49b3 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 8.6E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_14415 1d3d4d31348b86edd17d0a9f11cf49b3 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 8.6E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_14415 1d3d4d31348b86edd17d0a9f11cf49b3 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 8.6E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_14415 1d3d4d31348b86edd17d0a9f11cf49b3 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 8.6E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_14415 1d3d4d31348b86edd17d0a9f11cf49b3 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 8.6E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_14415 1d3d4d31348b86edd17d0a9f11cf49b3 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 8.6E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_14415 1d3d4d31348b86edd17d0a9f11cf49b3 247 Gene3D G3DSA:3.40.50.720 2 246 3.3E-71 T 11-10-2018 AL543_14415 1d3d4d31348b86edd17d0a9f11cf49b3 247 SUPERFAMILY SSF51735 10 242 1.62E-62 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_02080 00a3e37819970b5476d7a352b8ddeaf4 492 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 66 489 5.1E-181 T 11-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath AL543_02080 00a3e37819970b5476d7a352b8ddeaf4 492 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 17 490 1.4E-213 T 11-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath AL543_18830 96bd26674f5754fbe8a09b946d21eee7 571 SMART SM00387 312 423 5.6E-35 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_18830 96bd26674f5754fbe8a09b946d21eee7 571 Pfam PF00512 His Kinase A (phospho-acceptor) domain 202 265 1.8E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_18830 96bd26674f5754fbe8a09b946d21eee7 571 Gene3D G3DSA:3.40.50.2300 440 571 5.0E-37 T 11-10-2018 AL543_18830 96bd26674f5754fbe8a09b946d21eee7 571 Gene3D G3DSA:3.30.565.10 264 428 4.3E-43 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_18830 96bd26674f5754fbe8a09b946d21eee7 571 PRINTS PR00344 Bacterial sensor protein C-terminal signature 348 362 5.0E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_18830 96bd26674f5754fbe8a09b946d21eee7 571 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 401 5.0E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_18830 96bd26674f5754fbe8a09b946d21eee7 571 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 420 5.0E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_18830 96bd26674f5754fbe8a09b946d21eee7 571 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 376 5.0E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_18830 96bd26674f5754fbe8a09b946d21eee7 571 SUPERFAMILY SSF55874 254 425 1.57E-42 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_18830 96bd26674f5754fbe8a09b946d21eee7 571 Pfam PF00072 Response regulator receiver domain 447 556 3.5E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_18830 96bd26674f5754fbe8a09b946d21eee7 571 Gene3D G3DSA:1.10.287.130 177 263 3.7E-20 T 11-10-2018 AL543_18830 96bd26674f5754fbe8a09b946d21eee7 571 SMART SM00388 200 265 2.3E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_18830 96bd26674f5754fbe8a09b946d21eee7 571 SUPERFAMILY SSF52172 444 561 1.99E-35 T 11-10-2018 IPR011006 CheY-like superfamily AL543_18830 96bd26674f5754fbe8a09b946d21eee7 571 SMART SM00448 445 556 5.6E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_18830 96bd26674f5754fbe8a09b946d21eee7 571 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 312 422 2.0E-27 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_18830 96bd26674f5754fbe8a09b946d21eee7 571 SUPERFAMILY SSF47384 190 265 2.16E-16 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL543_07850 987e2811ffae0c9aeeddf6e4e23fbe37 103 SUPERFAMILY SSF54999 5 101 1.7E-36 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily AL543_07850 987e2811ffae0c9aeeddf6e4e23fbe37 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 3.3E-18 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07850 987e2811ffae0c9aeeddf6e4e23fbe37 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 3.3E-18 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07850 987e2811ffae0c9aeeddf6e4e23fbe37 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 3.3E-18 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07850 987e2811ffae0c9aeeddf6e4e23fbe37 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.1E-45 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07850 987e2811ffae0c9aeeddf6e4e23fbe37 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.898 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07850 987e2811ffae0c9aeeddf6e4e23fbe37 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 8.5E-35 T 11-10-2018 IPR027486 Ribosomal protein S10 domain AL543_07850 987e2811ffae0c9aeeddf6e4e23fbe37 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 11-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07850 987e2811ffae0c9aeeddf6e4e23fbe37 103 SMART SM01403 7 101 8.0E-56 T 11-10-2018 IPR027486 Ribosomal protein S10 domain AL543_07850 987e2811ffae0c9aeeddf6e4e23fbe37 103 Gene3D G3DSA:3.30.70.600 1 103 1.2E-37 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily AL543_01205 bfd4dfd1e344bdf601d7f2dd2968d1a4 154 Pfam PF01584 CheW-like domain 5 140 4.1E-33 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AL543_01205 bfd4dfd1e344bdf601d7f2dd2968d1a4 154 SUPERFAMILY SSF50341 5 140 6.41E-34 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AL543_01205 bfd4dfd1e344bdf601d7f2dd2968d1a4 154 Gene3D G3DSA:2.40.50.180 24 134 7.0E-36 T 11-10-2018 AL543_01205 bfd4dfd1e344bdf601d7f2dd2968d1a4 154 SMART SM00260 1 139 2.0E-35 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AL543_01205 bfd4dfd1e344bdf601d7f2dd2968d1a4 154 Gene3D G3DSA:2.30.30.40 8 133 7.0E-36 T 11-10-2018 AL543_02095 19764b34127e94122e75a80558560efa 339 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 29 325 3.8E-98 T 11-10-2018 IPR010732 Type VI secretion, TssG-like AL543_02095 19764b34127e94122e75a80558560efa 339 Pfam PF06996 Type VI secretion, TssG 29 325 7.6E-88 T 11-10-2018 IPR010732 Type VI secretion, TssG-like AL543_13095 24fc8c87f7ebe365b4a19fcc2152bdc7 258 TIGRFAM TIGR02780 TrbJ_Ti: P-type conjugative transfer protein TrbJ 10 251 8.6E-61 T 11-10-2018 IPR014147 Type IV conjugative transfer protein TrbJ AL543_13095 24fc8c87f7ebe365b4a19fcc2152bdc7 258 SUPERFAMILY SSF101082 30 225 1.57E-34 T 11-10-2018 AL543_10985 c32fa246dbbe0475e2d786c54f6876c6 327 Pfam PF01207 Dihydrouridine synthase (Dus) 9 316 2.3E-95 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AL543_10985 c32fa246dbbe0475e2d786c54f6876c6 327 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 6 319 1.0E-160 T 11-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 AL543_10985 c32fa246dbbe0475e2d786c54f6876c6 327 Gene3D G3DSA:3.20.20.70 4 245 5.8E-74 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_10985 c32fa246dbbe0475e2d786c54f6876c6 327 PIRSF PIRSF006621 1 325 4.7E-75 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AL543_10985 c32fa246dbbe0475e2d786c54f6876c6 327 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 87 105 - T 11-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AL543_10985 c32fa246dbbe0475e2d786c54f6876c6 327 Gene3D G3DSA:1.20.120.1460 247 324 7.4E-23 T 11-10-2018 AL543_10985 c32fa246dbbe0475e2d786c54f6876c6 327 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 1 322 53.594 T 11-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 AL543_10985 c32fa246dbbe0475e2d786c54f6876c6 327 SUPERFAMILY SSF51395 6 319 1.69E-77 T 11-10-2018 AL543_01900 10b8b1ed121b414c3a4a4c9d916b5c0b 384 SMART SM00671 67 97 330.0 T 11-10-2018 IPR006597 Sel1-like repeat AL543_01900 10b8b1ed121b414c3a4a4c9d916b5c0b 384 SMART SM00671 135 170 11.0 T 11-10-2018 IPR006597 Sel1-like repeat AL543_01900 10b8b1ed121b414c3a4a4c9d916b5c0b 384 SMART SM00671 243 276 370.0 T 11-10-2018 IPR006597 Sel1-like repeat AL543_01900 10b8b1ed121b414c3a4a4c9d916b5c0b 384 SMART SM00671 207 242 3.2E-4 T 11-10-2018 IPR006597 Sel1-like repeat AL543_01900 10b8b1ed121b414c3a4a4c9d916b5c0b 384 SMART SM00671 171 206 70.0 T 11-10-2018 IPR006597 Sel1-like repeat AL543_01900 10b8b1ed121b414c3a4a4c9d916b5c0b 384 Gene3D G3DSA:1.25.40.10 61 286 3.1E-29 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_01900 10b8b1ed121b414c3a4a4c9d916b5c0b 384 Pfam PF08238 Sel1 repeat 139 169 0.2 T 11-10-2018 IPR006597 Sel1-like repeat AL543_01900 10b8b1ed121b414c3a4a4c9d916b5c0b 384 Pfam PF08238 Sel1 repeat 196 206 12.0 T 11-10-2018 IPR006597 Sel1-like repeat AL543_01900 10b8b1ed121b414c3a4a4c9d916b5c0b 384 Pfam PF08238 Sel1 repeat 83 97 0.45 T 11-10-2018 IPR006597 Sel1-like repeat AL543_01900 10b8b1ed121b414c3a4a4c9d916b5c0b 384 Pfam PF08238 Sel1 repeat 207 242 3.7E-5 T 11-10-2018 IPR006597 Sel1-like repeat AL543_01900 10b8b1ed121b414c3a4a4c9d916b5c0b 384 SUPERFAMILY SSF81901 80 281 8.02E-25 T 11-10-2018 AL543_13895 532eed4a4d27a331f38073e4ff9af4ba 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 27.752 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 AL543_13895 532eed4a4d27a331f38073e4ff9af4ba 156 SUPERFAMILY SSF75217 2 154 2.04E-50 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AL543_13895 532eed4a4d27a331f38073e4ff9af4ba 156 PIRSF PIRSF004505 1 155 2.5E-43 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 AL543_13895 532eed4a4d27a331f38073e4ff9af4ba 156 Pfam PF02590 Predicted SPOUT methyltransferase 2 154 1.4E-48 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 AL543_13895 532eed4a4d27a331f38073e4ff9af4ba 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 1 156 8.8E-78 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 AL543_13895 532eed4a4d27a331f38073e4ff9af4ba 156 Gene3D G3DSA:3.40.1280.10 1 156 5.8E-53 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL543_08965 5ca45fbb820c877477d4b856e9b0e26b 222 Pfam PF13489 Methyltransferase domain 72 202 8.5E-20 T 11-10-2018 AL543_08965 5ca45fbb820c877477d4b856e9b0e26b 222 Gene3D G3DSA:3.40.50.150 12 120 1.0E-5 T 11-10-2018 AL543_08965 5ca45fbb820c877477d4b856e9b0e26b 222 SUPERFAMILY SSF53335 56 209 7.67E-22 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL543_08965 5ca45fbb820c877477d4b856e9b0e26b 222 Gene3D G3DSA:3.40.50.150 121 213 3.7E-9 T 11-10-2018 AL543_07705 825c5e0fc9fbdeebf46227e4b154e399 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 117 203 1.1E-25 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AL543_07705 825c5e0fc9fbdeebf46227e4b154e399 206 Gene3D G3DSA:1.10.287.460 4 67 3.7E-19 T 11-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 AL543_07705 825c5e0fc9fbdeebf46227e4b154e399 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 2 108 2.4E-24 T 11-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AL543_07705 825c5e0fc9fbdeebf46227e4b154e399 206 Gene3D G3DSA:3.10.50.40 68 206 1.0E-49 T 11-10-2018 AL543_07705 825c5e0fc9fbdeebf46227e4b154e399 206 SUPERFAMILY SSF54534 7 205 7.27E-55 T 11-10-2018 AL543_14390 4d385ea565efb78bc89d2c82709227ca 692 SUPERFAMILY SSF52540 32 222 1.95E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_14390 4d385ea565efb78bc89d2c82709227ca 692 Gene3D G3DSA:3.30.300.150 549 674 1.0E-42 T 11-10-2018 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL543_14390 4d385ea565efb78bc89d2c82709227ca 692 Gene3D G3DSA:1.20.272.10 242 361 1.6E-41 T 11-10-2018 AL543_14390 4d385ea565efb78bc89d2c82709227ca 692 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 478 549 7.0E-20 T 11-10-2018 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL543_14390 4d385ea565efb78bc89d2c82709227ca 692 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 355 3.1E-132 T 11-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 AL543_14390 4d385ea565efb78bc89d2c82709227ca 692 Gene3D G3DSA:3.40.50.300 13 177 2.4E-101 T 11-10-2018 AL543_14390 4d385ea565efb78bc89d2c82709227ca 692 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 233 358 1.1E-31 T 11-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 AL543_14390 4d385ea565efb78bc89d2c82709227ca 692 SMART SM00382 37 179 9.4E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_14390 4d385ea565efb78bc89d2c82709227ca 692 SUPERFAMILY SSF48019 243 361 1.02E-32 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AL543_14390 4d385ea565efb78bc89d2c82709227ca 692 Pfam PF13177 DNA polymerase III, delta subunit 20 178 1.9E-44 T 11-10-2018 AL543_14390 4d385ea565efb78bc89d2c82709227ca 692 Gene3D G3DSA:1.10.8.60 8 239 2.4E-101 T 11-10-2018 AL543_14390 4d385ea565efb78bc89d2c82709227ca 692 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 551 689 2.4E-49 T 11-10-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL543_14925 6c0e6a50e4b37258b73144c49b05692d 188 Pfam PF16036 Chalcone isomerase-like 47 184 2.9E-8 T 11-10-2018 IPR016087 Chalcone isomerase GO:0016872 AL543_09480 2efaef2e8a4eab24d41f056d39ef3248 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 13.352 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AL543_09480 2efaef2e8a4eab24d41f056d39ef3248 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 5.8E-59 T 11-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 AL543_09480 2efaef2e8a4eab24d41f056d39ef3248 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 4.3E-36 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AL543_09480 2efaef2e8a4eab24d41f056d39ef3248 156 Gene3D G3DSA:1.20.5.620 62 122 4.5E-23 T 11-10-2018 AL543_09480 2efaef2e8a4eab24d41f056d39ef3248 156 SUPERFAMILY SSF81573 63 121 5.1E-15 T 11-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily AL543_03500 41a714063d96d4422c8a80859ea710ca 206 Gene3D G3DSA:3.40.50.850 1 206 1.0E-69 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AL543_03500 41a714063d96d4422c8a80859ea710ca 206 Pfam PF00857 Isochorismatase family 4 202 7.8E-27 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 AL543_03500 41a714063d96d4422c8a80859ea710ca 206 SUPERFAMILY SSF52499 2 205 3.92E-47 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AL543_12355 ecf191c0d070da3789f26b34283cc90f 89 Pfam PF00312 Ribosomal protein S15 8 88 1.0E-35 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_12355 ecf191c0d070da3789f26b34283cc90f 89 Gene3D G3DSA:1.10.287.10 2 89 6.8E-35 T 11-10-2018 AL543_12355 ecf191c0d070da3789f26b34283cc90f 89 SUPERFAMILY SSF47060 3 89 3.53E-34 T 11-10-2018 IPR009068 S15/NS1, RNA-binding AL543_12355 ecf191c0d070da3789f26b34283cc90f 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 9.0E-40 T 11-10-2018 AL543_12355 ecf191c0d070da3789f26b34283cc90f 89 SMART SM01387 8 88 8.5E-51 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_12355 ecf191c0d070da3789f26b34283cc90f 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 3.4E-38 T 11-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_12355 ecf191c0d070da3789f26b34283cc90f 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.367 T 11-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_12355 ecf191c0d070da3789f26b34283cc90f 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_02305 a20ece7c25f7fb22171421300c49e1a6 443 Pfam PF01794 Ferric reductase like transmembrane component 43 179 2.3E-20 T 11-10-2018 IPR013130 Ferric reductase transmembrane component-like domain AL543_02305 a20ece7c25f7fb22171421300c49e1a6 443 Pfam PF08022 FAD-binding domain 240 314 1.3E-7 T 11-10-2018 IPR013112 FAD-binding 8 GO:0016491|GO:0055114 AL543_02305 a20ece7c25f7fb22171421300c49e1a6 443 Gene3D G3DSA:2.40.30.10 227 317 1.3E-14 T 11-10-2018 AL543_02305 a20ece7c25f7fb22171421300c49e1a6 443 SUPERFAMILY SSF52343 316 437 3.27E-17 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AL543_02305 a20ece7c25f7fb22171421300c49e1a6 443 SUPERFAMILY SSF63380 238 316 4.12E-16 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AL543_02305 a20ece7c25f7fb22171421300c49e1a6 443 Gene3D G3DSA:3.40.50.80 319 443 2.8E-15 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AL543_06950 6078da91d3df4939513fbb721a95cf86 626 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 3 623 0.0 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL543_06950 6078da91d3df4939513fbb721a95cf86 626 PRINTS PR00418 DNA topoisomerase II family signature 109 123 8.5E-59 T 11-10-2018 AL543_06950 6078da91d3df4939513fbb721a95cf86 626 PRINTS PR00418 DNA topoisomerase II family signature 497 514 8.5E-59 T 11-10-2018 AL543_06950 6078da91d3df4939513fbb721a95cf86 626 PRINTS PR00418 DNA topoisomerase II family signature 560 576 8.5E-59 T 11-10-2018 AL543_06950 6078da91d3df4939513fbb721a95cf86 626 PRINTS PR00418 DNA topoisomerase II family signature 479 495 8.5E-59 T 11-10-2018 AL543_06950 6078da91d3df4939513fbb721a95cf86 626 PRINTS PR00418 DNA topoisomerase II family signature 31 46 8.5E-59 T 11-10-2018 AL543_06950 6078da91d3df4939513fbb721a95cf86 626 PRINTS PR00418 DNA topoisomerase II family signature 517 529 8.5E-59 T 11-10-2018 AL543_06950 6078da91d3df4939513fbb721a95cf86 626 PRINTS PR00418 DNA topoisomerase II family signature 266 279 8.5E-59 T 11-10-2018 AL543_06950 6078da91d3df4939513fbb721a95cf86 626 PRINTS PR00418 DNA topoisomerase II family signature 414 428 8.5E-59 T 11-10-2018 AL543_06950 6078da91d3df4939513fbb721a95cf86 626 PRINTS PR00418 DNA topoisomerase II family signature 66 79 8.5E-59 T 11-10-2018 AL543_06950 6078da91d3df4939513fbb721a95cf86 626 SUPERFAMILY SSF54211 217 382 1.37E-46 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL543_06950 6078da91d3df4939513fbb721a95cf86 626 SMART SM00387 27 173 4.1E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_06950 6078da91d3df4939513fbb721a95cf86 626 Gene3D G3DSA:3.40.50.670 390 621 9.3E-95 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL543_06950 6078da91d3df4939513fbb721a95cf86 626 ProSitePatterns PS00177 DNA topoisomerase II signature. 416 424 - T 11-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL543_06950 6078da91d3df4939513fbb721a95cf86 626 SMART SM00433 34 622 4.7E-216 T 11-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL543_06950 6078da91d3df4939513fbb721a95cf86 626 Gene3D G3DSA:3.30.230.10 216 389 5.4E-57 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL543_06950 6078da91d3df4939513fbb721a95cf86 626 Gene3D G3DSA:3.30.565.10 2 215 8.8E-75 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_06950 6078da91d3df4939513fbb721a95cf86 626 Pfam PF00204 DNA gyrase B 218 384 1.2E-42 T 11-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL543_06950 6078da91d3df4939513fbb721a95cf86 626 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 170 2.1E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_06950 6078da91d3df4939513fbb721a95cf86 626 Pfam PF01751 Toprim domain 413 522 6.0E-13 T 11-10-2018 IPR006171 TOPRIM domain AL543_06950 6078da91d3df4939513fbb721a95cf86 626 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 556 618 1.2E-27 T 11-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL543_06950 6078da91d3df4939513fbb721a95cf86 626 PRINTS PR01098 Topoisomerase IV subunit B signature 135 149 5.8E-129 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL543_06950 6078da91d3df4939513fbb721a95cf86 626 PRINTS PR01098 Topoisomerase IV subunit B signature 338 361 5.8E-129 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL543_06950 6078da91d3df4939513fbb721a95cf86 626 PRINTS PR01098 Topoisomerase IV subunit B signature 448 469 5.8E-129 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL543_06950 6078da91d3df4939513fbb721a95cf86 626 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 5.8E-129 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL543_06950 6078da91d3df4939513fbb721a95cf86 626 PRINTS PR01098 Topoisomerase IV subunit B signature 362 387 5.8E-129 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL543_06950 6078da91d3df4939513fbb721a95cf86 626 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 5.8E-129 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL543_06950 6078da91d3df4939513fbb721a95cf86 626 PRINTS PR01098 Topoisomerase IV subunit B signature 311 326 5.8E-129 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL543_06950 6078da91d3df4939513fbb721a95cf86 626 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 5.8E-129 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL543_06950 6078da91d3df4939513fbb721a95cf86 626 PRINTS PR01098 Topoisomerase IV subunit B signature 503 519 5.8E-129 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL543_06950 6078da91d3df4939513fbb721a95cf86 626 PRINTS PR01098 Topoisomerase IV subunit B signature 294 310 5.8E-129 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL543_06950 6078da91d3df4939513fbb721a95cf86 626 PRINTS PR01098 Topoisomerase IV subunit B signature 537 559 5.8E-129 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL543_06950 6078da91d3df4939513fbb721a95cf86 626 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 5.8E-129 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL543_06950 6078da91d3df4939513fbb721a95cf86 626 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 5.8E-129 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL543_06950 6078da91d3df4939513fbb721a95cf86 626 PRINTS PR01098 Topoisomerase IV subunit B signature 469 481 5.8E-129 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL543_06950 6078da91d3df4939513fbb721a95cf86 626 SUPERFAMILY SSF55874 5 215 1.33E-66 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_06950 6078da91d3df4939513fbb721a95cf86 626 SUPERFAMILY SSF56719 388 619 2.22E-80 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AL543_06950 6078da91d3df4939513fbb721a95cf86 626 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 626 46.948 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL543_16130 7726a6add32723dc7c6edceefdc9a2cf 91 ProSitePatterns PS00151 Acylphosphatase signature 2. 34 50 - T 11-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AL543_16130 7726a6add32723dc7c6edceefdc9a2cf 91 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 11-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AL543_16130 7726a6add32723dc7c6edceefdc9a2cf 91 Gene3D G3DSA:3.30.70.100 1 91 1.3E-29 T 11-10-2018 AL543_16130 7726a6add32723dc7c6edceefdc9a2cf 91 SUPERFAMILY SSF54975 3 90 1.26E-25 T 11-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AL543_16130 7726a6add32723dc7c6edceefdc9a2cf 91 Pfam PF00708 Acylphosphatase 7 90 5.3E-23 T 11-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AL543_18350 cdf1638dfed221fa025c401bceac5a39 204 Pfam PF01330 RuvA N terminal domain 2 62 8.2E-20 T 11-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 AL543_18350 cdf1638dfed221fa025c401bceac5a39 204 Gene3D G3DSA:2.40.50.140 1 65 3.5E-26 T 11-10-2018 AL543_18350 cdf1638dfed221fa025c401bceac5a39 204 SUPERFAMILY SSF46929 159 203 1.01E-11 T 11-10-2018 IPR036267 RuvA, C-terminal domain superfamily AL543_18350 cdf1638dfed221fa025c401bceac5a39 204 SMART SM00278 73 92 160.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AL543_18350 cdf1638dfed221fa025c401bceac5a39 204 SMART SM00278 108 127 0.046 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AL543_18350 cdf1638dfed221fa025c401bceac5a39 204 Pfam PF14520 Helix-hairpin-helix domain 72 130 3.0E-14 T 11-10-2018 AL543_18350 cdf1638dfed221fa025c401bceac5a39 204 Gene3D G3DSA:1.10.150.20 67 143 9.7E-26 T 11-10-2018 AL543_18350 cdf1638dfed221fa025c401bceac5a39 204 SUPERFAMILY SSF47781 66 136 1.67E-20 T 11-10-2018 IPR010994 RuvA domain 2-like AL543_18350 cdf1638dfed221fa025c401bceac5a39 204 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 203 1.6E-61 T 11-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 AL543_18350 cdf1638dfed221fa025c401bceac5a39 204 SUPERFAMILY SSF50249 2 63 4.68E-18 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL543_18350 cdf1638dfed221fa025c401bceac5a39 204 Gene3D G3DSA:1.10.8.10 157 204 6.1E-21 T 11-10-2018 AL543_18350 cdf1638dfed221fa025c401bceac5a39 204 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 204 31.389 T 11-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 AL543_18350 cdf1638dfed221fa025c401bceac5a39 204 Pfam PF07499 RuvA, C-terminal domain 160 203 1.4E-15 T 11-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 AL543_10670 3001b614a4fd7b8fd2b41a5c7118ec87 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 4.0E-17 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AL543_10670 3001b614a4fd7b8fd2b41a5c7118ec87 394 SUPERFAMILY SSF50465 298 393 3.17E-35 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AL543_10670 3001b614a4fd7b8fd2b41a5c7118ec87 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site AL543_10670 3001b614a4fd7b8fd2b41a5c7118ec87 394 Gene3D G3DSA:2.40.30.10 338 393 1.3E-29 T 11-10-2018 AL543_10670 3001b614a4fd7b8fd2b41a5c7118ec87 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 4.2E-233 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL543_10670 3001b614a4fd7b8fd2b41a5c7118ec87 394 Gene3D G3DSA:2.40.30.10 207 334 3.1E-51 T 11-10-2018 AL543_10670 3001b614a4fd7b8fd2b41a5c7118ec87 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.2E-13 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL543_10670 3001b614a4fd7b8fd2b41a5c7118ec87 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 3.0E-33 T 11-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AL543_10670 3001b614a4fd7b8fd2b41a5c7118ec87 394 Gene3D G3DSA:3.40.50.300 1 203 1.4E-70 T 11-10-2018 AL543_10670 3001b614a4fd7b8fd2b41a5c7118ec87 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 59.756 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL543_10670 3001b614a4fd7b8fd2b41a5c7118ec87 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 3.5E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL543_10670 3001b614a4fd7b8fd2b41a5c7118ec87 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 3.5E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL543_10670 3001b614a4fd7b8fd2b41a5c7118ec87 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 3.5E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL543_10670 3001b614a4fd7b8fd2b41a5c7118ec87 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 3.5E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL543_10670 3001b614a4fd7b8fd2b41a5c7118ec87 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 3.5E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL543_10670 3001b614a4fd7b8fd2b41a5c7118ec87 394 SUPERFAMILY SSF50447 205 301 2.75E-29 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AL543_10670 3001b614a4fd7b8fd2b41a5c7118ec87 394 SUPERFAMILY SSF52540 6 219 1.61E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_10670 3001b614a4fd7b8fd2b41a5c7118ec87 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 1.5E-58 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL543_14345 e8974396a0c2aef0c01f94b4c1557cc4 188 Pfam PF08281 Sigma-70, region 4 120 172 1.0E-10 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL543_14345 e8974396a0c2aef0c01f94b4c1557cc4 188 Gene3D G3DSA:1.10.1740.10 10 92 8.0E-18 T 11-10-2018 AL543_14345 e8974396a0c2aef0c01f94b4c1557cc4 188 Gene3D G3DSA:1.10.10.10 114 177 2.8E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_14345 e8974396a0c2aef0c01f94b4c1557cc4 188 Pfam PF04542 Sigma-70 region 2 30 96 1.8E-16 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AL543_14345 e8974396a0c2aef0c01f94b4c1557cc4 188 SUPERFAMILY SSF88946 24 105 7.06E-20 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AL543_14345 e8974396a0c2aef0c01f94b4c1557cc4 188 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 52 83 - T 11-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL543_14345 e8974396a0c2aef0c01f94b4c1557cc4 188 SUPERFAMILY SSF88659 117 177 2.99E-12 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AL543_14345 e8974396a0c2aef0c01f94b4c1557cc4 188 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 27 176 4.7E-21 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AL543_01420 899bae9154036754c6ebbf73bc0c8963 462 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 411 427 - T 11-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 AL543_01420 899bae9154036754c6ebbf73bc0c8963 462 Pfam PF00939 Sodium:sulfate symporter transmembrane region 22 462 1.9E-55 T 11-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AL543_01420 899bae9154036754c6ebbf73bc0c8963 462 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 43 461 5.9E-113 T 11-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AL543_15750 c0410db6919f94fedbc8fdcde6e79ef7 540 ProSitePatterns PS01303 BCCT family of transporters signature. 342 351 - T 11-10-2018 IPR018093 BCCT transporter, conserved site AL543_15750 c0410db6919f94fedbc8fdcde6e79ef7 540 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 79 527 4.6E-139 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 AL543_15750 c0410db6919f94fedbc8fdcde6e79ef7 540 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 39 526 1.0E-175 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 AL543_11235 acdf5af1c3ad6917866ae9574783239b 205 Hamap MF_00528 Septum formation protein Maf [maf]. 23 205 29.763 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 AL543_11235 acdf5af1c3ad6917866ae9574783239b 205 Pfam PF02545 Maf-like protein 23 204 3.5E-60 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 AL543_11235 acdf5af1c3ad6917866ae9574783239b 205 PIRSF PIRSF006305 18 205 6.4E-56 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 AL543_11235 acdf5af1c3ad6917866ae9574783239b 205 SUPERFAMILY SSF52972 21 204 7.85E-63 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AL543_11235 acdf5af1c3ad6917866ae9574783239b 205 Gene3D G3DSA:3.90.950.10 22 205 3.7E-69 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AL543_11235 acdf5af1c3ad6917866ae9574783239b 205 TIGRFAM TIGR00172 maf: septum formation protein Maf 23 202 2.6E-55 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 AL543_18065 d182e950a39379b16eff4713ba42df54 346 SMART SM00028 182 215 0.077 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL543_18065 d182e950a39379b16eff4713ba42df54 346 SMART SM00028 216 249 9.3E-5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL543_18065 d182e950a39379b16eff4713ba42df54 346 SMART SM00028 121 154 1.7 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL543_18065 d182e950a39379b16eff4713ba42df54 346 SMART SM00028 280 313 2.7E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL543_18065 d182e950a39379b16eff4713ba42df54 346 SMART SM00028 87 120 0.0076 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL543_18065 d182e950a39379b16eff4713ba42df54 346 Pfam PF07719 Tetratricopeptide repeat 218 249 2.9E-7 T 11-10-2018 IPR013105 Tetratricopeptide repeat 2 AL543_18065 d182e950a39379b16eff4713ba42df54 346 SUPERFAMILY SSF48452 56 327 1.9E-27 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_18065 d182e950a39379b16eff4713ba42df54 346 Pfam PF13181 Tetratricopeptide repeat 196 214 0.13 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL543_18065 d182e950a39379b16eff4713ba42df54 346 Pfam PF13181 Tetratricopeptide repeat 281 308 0.029 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL543_18065 d182e950a39379b16eff4713ba42df54 346 Gene3D G3DSA:1.25.40.10 41 155 1.5E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_18065 d182e950a39379b16eff4713ba42df54 346 Pfam PF13432 Tetratricopeptide repeat 91 148 4.8E-4 T 11-10-2018 AL543_18065 d182e950a39379b16eff4713ba42df54 346 Gene3D G3DSA:1.25.40.10 156 340 2.7E-26 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_01135 ff39be797c5b8285bfba88a6290923ac 463 Gene3D G3DSA:1.10.287.470 105 126 1.5E-6 T 11-10-2018 AL543_01135 ff39be797c5b8285bfba88a6290923ac 463 Pfam PF13533 Biotin-lipoyl like 75 108 2.8E-5 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AL543_01135 ff39be797c5b8285bfba88a6290923ac 463 SUPERFAMILY SSF56954 171 262 8.5E-6 T 11-10-2018 AL543_01135 ff39be797c5b8285bfba88a6290923ac 463 Pfam PF13437 HlyD family secretion protein 316 429 9.0E-18 T 11-10-2018 AL543_01135 ff39be797c5b8285bfba88a6290923ac 463 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 31 463 1.5E-136 T 11-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 AL543_01135 ff39be797c5b8285bfba88a6290923ac 463 Gene3D G3DSA:2.40.30.170 354 441 1.1E-15 T 11-10-2018 AL543_01135 ff39be797c5b8285bfba88a6290923ac 463 Gene3D G3DSA:2.40.50.100 317 353 1.1E-15 T 11-10-2018 AL543_01135 ff39be797c5b8285bfba88a6290923ac 463 Gene3D G3DSA:1.10.287.470 192 316 1.1E-15 T 11-10-2018 AL543_01135 ff39be797c5b8285bfba88a6290923ac 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 386 409 1.9E-49 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL543_01135 ff39be797c5b8285bfba88a6290923ac 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 428 443 1.9E-49 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL543_01135 ff39be797c5b8285bfba88a6290923ac 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 82 102 1.9E-49 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL543_01135 ff39be797c5b8285bfba88a6290923ac 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 329 350 1.9E-49 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL543_01135 ff39be797c5b8285bfba88a6290923ac 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 40 63 1.9E-49 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL543_01135 ff39be797c5b8285bfba88a6290923ac 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 443 463 1.9E-49 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL543_01135 ff39be797c5b8285bfba88a6290923ac 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 362 386 1.9E-49 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL543_01135 ff39be797c5b8285bfba88a6290923ac 463 ProSitePatterns PS00543 HlyD family secretion proteins signature. 428 450 - T 11-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 AL543_01135 ff39be797c5b8285bfba88a6290923ac 463 Gene3D G3DSA:2.40.50.100 69 104 1.5E-6 T 11-10-2018 AL543_01135 ff39be797c5b8285bfba88a6290923ac 463 SUPERFAMILY SSF111369 63 123 7.98E-5 T 11-10-2018 AL543_03340 cae33c5adc7e7e0a02c557ee7c544278 547 TIGRFAM TIGR03377 glycerol3P_GlpA: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit 10 537 2.4E-263 T 11-10-2018 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit GO:0004368|GO:0005886|GO:0010181|GO:0046174|GO:0050660|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 AL543_03340 cae33c5adc7e7e0a02c557ee7c544278 547 Gene3D G3DSA:3.50.50.60 10 366 7.4E-78 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_03340 cae33c5adc7e7e0a02c557ee7c544278 547 Pfam PF04324 BFD-like [2Fe-2S] binding domain 431 483 2.6E-10 T 11-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain AL543_03340 cae33c5adc7e7e0a02c557ee7c544278 547 SUPERFAMILY SSF54373 226 317 3.27E-12 T 11-10-2018 AL543_03340 cae33c5adc7e7e0a02c557ee7c544278 547 SUPERFAMILY SSF51905 9 371 7.77E-41 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_03340 cae33c5adc7e7e0a02c557ee7c544278 547 Gene3D G3DSA:3.30.9.10 86 318 7.4E-78 T 11-10-2018 AL543_03340 cae33c5adc7e7e0a02c557ee7c544278 547 Gene3D G3DSA:1.10.10.1100 419 490 9.3E-20 T 11-10-2018 AL543_03340 cae33c5adc7e7e0a02c557ee7c544278 547 Pfam PF01266 FAD dependent oxidoreductase 10 359 3.4E-49 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL543_03340 cae33c5adc7e7e0a02c557ee7c544278 547 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 352 362 - T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AL543_03340 cae33c5adc7e7e0a02c557ee7c544278 547 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 22 32 4.0E-21 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AL543_03340 cae33c5adc7e7e0a02c557ee7c544278 547 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 311 317 4.0E-21 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AL543_03340 cae33c5adc7e7e0a02c557ee7c544278 547 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 347 359 4.0E-21 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AL543_03340 cae33c5adc7e7e0a02c557ee7c544278 547 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 9 21 4.0E-21 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AL543_03340 cae33c5adc7e7e0a02c557ee7c544278 547 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 38 50 4.0E-21 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AL543_05450 c53e1e8a5b3290d9569549a6e1047aaa 80 SUPERFAMILY SSF47598 4 45 9.12E-10 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 AL543_05450 c53e1e8a5b3290d9569549a6e1047aaa 80 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 4 71 5.8E-30 T 11-10-2018 IPR022789 Antitoxin ParD AL543_05450 c53e1e8a5b3290d9569549a6e1047aaa 80 Gene3D G3DSA:1.10.8.1250 10 80 4.7E-26 T 11-10-2018 IPR038296 Antitoxin ParD superfamily AL543_05450 c53e1e8a5b3290d9569549a6e1047aaa 80 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 1 79 2.1E-38 T 11-10-2018 IPR022789 Antitoxin ParD AL543_12350 c25b68c275fdc5ec04adf6281fab7ca3 312 SUPERFAMILY SSF88697 250 309 1.64E-14 T 11-10-2018 IPR015947 PUA-like superfamily AL543_12350 c25b68c275fdc5ec04adf6281fab7ca3 312 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 308 18.929 T 11-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL543_12350 c25b68c275fdc5ec04adf6281fab7ca3 312 SUPERFAMILY SSF55120 9 247 6.33E-82 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL543_12350 c25b68c275fdc5ec04adf6281fab7ca3 312 Gene3D G3DSA:2.30.130.10 249 311 4.8E-21 T 11-10-2018 IPR036974 PUA domain superfamily GO:0003723 AL543_12350 c25b68c275fdc5ec04adf6281fab7ca3 312 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 179 5.8E-57 T 11-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 AL543_12350 c25b68c275fdc5ec04adf6281fab7ca3 312 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 251 308 1.3E-18 T 11-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL543_12350 c25b68c275fdc5ec04adf6281fab7ca3 312 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 180 247 2.8E-24 T 11-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 AL543_12350 c25b68c275fdc5ec04adf6281fab7ca3 312 Gene3D G3DSA:3.30.2350.10 1 248 7.6E-94 T 11-10-2018 AL543_12350 c25b68c275fdc5ec04adf6281fab7ca3 312 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 11 218 2.8E-86 T 11-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL543_00630 bfa3db41825a8c82bf2d9e7966ba62b6 393 PRINTS PR00181 Maltose binding protein signature 67 85 2.1E-79 T 11-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 AL543_00630 bfa3db41825a8c82bf2d9e7966ba62b6 393 PRINTS PR00181 Maltose binding protein signature 127 146 2.1E-79 T 11-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 AL543_00630 bfa3db41825a8c82bf2d9e7966ba62b6 393 PRINTS PR00181 Maltose binding protein signature 230 249 2.1E-79 T 11-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 AL543_00630 bfa3db41825a8c82bf2d9e7966ba62b6 393 PRINTS PR00181 Maltose binding protein signature 168 187 2.1E-79 T 11-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 AL543_00630 bfa3db41825a8c82bf2d9e7966ba62b6 393 PRINTS PR00181 Maltose binding protein signature 148 167 2.1E-79 T 11-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 AL543_00630 bfa3db41825a8c82bf2d9e7966ba62b6 393 PRINTS PR00181 Maltose binding protein signature 296 317 2.1E-79 T 11-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 AL543_00630 bfa3db41825a8c82bf2d9e7966ba62b6 393 PRINTS PR00181 Maltose binding protein signature 354 373 2.1E-79 T 11-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 AL543_00630 bfa3db41825a8c82bf2d9e7966ba62b6 393 PRINTS PR00181 Maltose binding protein signature 33 51 2.1E-79 T 11-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 AL543_00630 bfa3db41825a8c82bf2d9e7966ba62b6 393 Pfam PF13416 Bacterial extracellular solute-binding protein 47 319 3.2E-44 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein AL543_00630 bfa3db41825a8c82bf2d9e7966ba62b6 393 Gene3D G3DSA:3.40.190.10 45 354 7.1E-135 T 11-10-2018 AL543_00630 bfa3db41825a8c82bf2d9e7966ba62b6 393 Gene3D G3DSA:3.40.190.10 135 385 7.1E-135 T 11-10-2018 AL543_00630 bfa3db41825a8c82bf2d9e7966ba62b6 393 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 130 147 - T 11-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 AL543_00630 bfa3db41825a8c82bf2d9e7966ba62b6 393 SUPERFAMILY SSF53850 25 392 3.93E-91 T 11-10-2018 AL543_04715 402d775a4192b589217f3b98370065a8 612 SUPERFAMILY SSF55781 35 164 2.11E-16 T 11-10-2018 AL543_04715 402d775a4192b589217f3b98370065a8 612 Gene3D G3DSA:3.30.450.40 11 170 9.5E-11 T 11-10-2018 IPR029016 GAF-like domain superfamily AL543_04715 402d775a4192b589217f3b98370065a8 612 SUPERFAMILY SSF55073 172 313 7.45E-11 T 11-10-2018 IPR029787 Nucleotide cyclase AL543_04715 402d775a4192b589217f3b98370065a8 612 Gene3D G3DSA:3.30.70.270 171 329 2.8E-13 T 11-10-2018 AL543_04715 402d775a4192b589217f3b98370065a8 612 Pfam PF00563 EAL domain 342 568 7.8E-57 T 11-10-2018 IPR001633 EAL domain AL543_04715 402d775a4192b589217f3b98370065a8 612 Gene3D G3DSA:3.20.20.450 330 584 2.2E-66 T 11-10-2018 IPR035919 EAL domain superfamily AL543_04715 402d775a4192b589217f3b98370065a8 612 SUPERFAMILY SSF141868 342 581 5.23E-62 T 11-10-2018 IPR035919 EAL domain superfamily AL543_04715 402d775a4192b589217f3b98370065a8 612 SMART SM00052 324 574 6.3E-57 T 11-10-2018 IPR001633 EAL domain AL543_06385 eed6562e03bc56d54a8ff9da6388bd41 368 Gene3D G3DSA:2.40.240.50 120 258 1.1E-139 T 11-10-2018 AL543_06385 eed6562e03bc56d54a8ff9da6388bd41 368 SUPERFAMILY SSF50685 21 351 5.23E-102 T 11-10-2018 IPR036908 RlpA-like domain superfamily AL543_06385 eed6562e03bc56d54a8ff9da6388bd41 368 Pfam PF03562 MltA specific insert domain 87 253 7.6E-37 T 11-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 AL543_06385 eed6562e03bc56d54a8ff9da6388bd41 368 Pfam PF06725 3D domain 273 349 1.8E-20 T 11-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 AL543_06385 eed6562e03bc56d54a8ff9da6388bd41 368 SMART SM00925 120 253 1.6E-66 T 11-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 AL543_06385 eed6562e03bc56d54a8ff9da6388bd41 368 Gene3D G3DSA:2.40.40.10 52 349 1.1E-139 T 11-10-2018 IPR036908 RlpA-like domain superfamily AL543_19505 1900aa35c33c54cbfd7555a57a218a01 332 SUPERFAMILY SSF46689 16 131 5.97E-25 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_19505 1900aa35c33c54cbfd7555a57a218a01 332 Pfam PF13592 Winged helix-turn helix 98 155 6.8E-20 T 11-10-2018 IPR025959 Winged helix-turn helix domain AL543_19505 1900aa35c33c54cbfd7555a57a218a01 332 Gene3D G3DSA:3.30.420.470 137 332 1.9E-11 T 11-10-2018 AL543_19505 1900aa35c33c54cbfd7555a57a218a01 332 Pfam PF13551 Winged helix-turn helix 32 87 1.7E-7 T 11-10-2018 AL543_19505 1900aa35c33c54cbfd7555a57a218a01 332 SUPERFAMILY SSF53098 221 316 2.43E-7 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_19505 1900aa35c33c54cbfd7555a57a218a01 332 Pfam PF13358 DDE superfamily endonuclease 169 312 1.7E-34 T 11-10-2018 IPR038717 Tc1-like transposase, DDE domain AL543_15525 70ba373f6bd842a91e09861d67f4fde2 335 Pfam PF01032 FecCD transport family 28 330 3.9E-81 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AL543_15525 70ba373f6bd842a91e09861d67f4fde2 335 Gene3D G3DSA:1.10.3470.10 8 332 1.3E-94 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AL543_15525 70ba373f6bd842a91e09861d67f4fde2 335 SUPERFAMILY SSF81345 10 331 1.96E-80 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AL543_15525 70ba373f6bd842a91e09861d67f4fde2 335 Hamap MF_01004 Vitamin B12 import system permease protein BtuC [btuC]. 7 333 31.023 T 11-10-2018 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC GO:0015889|GO:0016020 AL543_00070 c0ef452242aac417cd40974018d2cc6e 361 PRINTS PR00933 B-lytic metalloendopeptidase (M23) signature 290 310 6.7E-41 T 11-10-2018 IPR000841 Peptidase M23A, B-lytic metalloendopeptidase GO:0004222|GO:0006508 AL543_00070 c0ef452242aac417cd40974018d2cc6e 361 PRINTS PR00933 B-lytic metalloendopeptidase (M23) signature 317 340 6.7E-41 T 11-10-2018 IPR000841 Peptidase M23A, B-lytic metalloendopeptidase GO:0004222|GO:0006508 AL543_00070 c0ef452242aac417cd40974018d2cc6e 361 PRINTS PR00933 B-lytic metalloendopeptidase (M23) signature 238 256 6.7E-41 T 11-10-2018 IPR000841 Peptidase M23A, B-lytic metalloendopeptidase GO:0004222|GO:0006508 AL543_00070 c0ef452242aac417cd40974018d2cc6e 361 PRINTS PR00933 B-lytic metalloendopeptidase (M23) signature 189 210 6.7E-41 T 11-10-2018 IPR000841 Peptidase M23A, B-lytic metalloendopeptidase GO:0004222|GO:0006508 AL543_00070 c0ef452242aac417cd40974018d2cc6e 361 PRINTS PR00933 B-lytic metalloendopeptidase (M23) signature 211 229 6.7E-41 T 11-10-2018 IPR000841 Peptidase M23A, B-lytic metalloendopeptidase GO:0004222|GO:0006508 AL543_00070 c0ef452242aac417cd40974018d2cc6e 361 Gene3D G3DSA:2.70.70.10 184 361 2.0E-44 T 11-10-2018 IPR011055 Duplicated hybrid motif AL543_00070 c0ef452242aac417cd40974018d2cc6e 361 SUPERFAMILY SSF51261 168 310 7.32E-16 T 11-10-2018 IPR011055 Duplicated hybrid motif AL543_00070 c0ef452242aac417cd40974018d2cc6e 361 Pfam PF01551 Peptidase family M23 231 311 1.1E-8 T 11-10-2018 IPR016047 Peptidase M23 AL543_18070 ca4e4672732d2b5914d97beae3890ed7 314 Pfam PF00482 Type II secretion system (T2SS), protein F 174 301 1.2E-22 T 11-10-2018 IPR018076 Type II secretion system F domain AL543_18405 8f295c6e620cc634a155fea7884eef3e 259 Pfam PF01925 Sulfite exporter TauE/SafE 13 250 4.6E-47 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AL543_15335 d31acf6b8c693423e6a6f192b4cfc98b 236 SMART SM00866 90 227 2.0E-33 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AL543_15335 d31acf6b8c693423e6a6f192b4cfc98b 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 27 41 2.9E-8 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL543_15335 d31acf6b8c693423e6a6f192b4cfc98b 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 57 2.9E-8 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL543_15335 d31acf6b8c693423e6a6f192b4cfc98b 236 Gene3D G3DSA:3.40.1410.10 89 223 8.4E-33 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AL543_15335 d31acf6b8c693423e6a6f192b4cfc98b 236 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 3 232 3.2E-99 T 11-10-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 AL543_15335 d31acf6b8c693423e6a6f192b4cfc98b 236 SUPERFAMILY SSF64288 94 230 1.73E-39 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AL543_15335 d31acf6b8c693423e6a6f192b4cfc98b 236 Pfam PF07702 UTRA domain 90 227 3.3E-34 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AL543_15335 d31acf6b8c693423e6a6f192b4cfc98b 236 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 67 1.6E-17 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL543_15335 d31acf6b8c693423e6a6f192b4cfc98b 236 SMART SM00345 8 67 4.3E-17 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL543_15335 d31acf6b8c693423e6a6f192b4cfc98b 236 Gene3D G3DSA:1.10.10.10 3 71 8.9E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_15335 d31acf6b8c693423e6a6f192b4cfc98b 236 SUPERFAMILY SSF46785 3 71 8.16E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_06455 8faf78bd8878ddb1786ebfcd62986004 363 Pfam PF11814 Peptidase_C39 like family 157 359 4.3E-78 T 11-10-2018 IPR021770 Protein of unknown function DUF3335 AL543_06455 8faf78bd8878ddb1786ebfcd62986004 363 Pfam PF00583 Acetyltransferase (GNAT) family 34 123 7.3E-19 T 11-10-2018 IPR000182 GNAT domain AL543_06455 8faf78bd8878ddb1786ebfcd62986004 363 Gene3D G3DSA:3.40.630.30 1 151 9.6E-33 T 11-10-2018 AL543_06455 8faf78bd8878ddb1786ebfcd62986004 363 SUPERFAMILY SSF55729 1 149 7.09E-33 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL543_00775 d8e1d7840a4180cd0862af8fbda94a68 786 Gene3D G3DSA:3.40.50.300 219 449 1.3E-55 T 11-10-2018 AL543_00775 d8e1d7840a4180cd0862af8fbda94a68 786 Gene3D G3DSA:3.40.50.300 6 198 1.2E-27 T 11-10-2018 AL543_00775 d8e1d7840a4180cd0862af8fbda94a68 786 Gene3D G3DSA:1.10.8.60 450 536 5.4E-11 T 11-10-2018 AL543_00775 d8e1d7840a4180cd0862af8fbda94a68 786 SUPERFAMILY SSF52540 30 537 3.13E-13 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_00775 d8e1d7840a4180cd0862af8fbda94a68 786 Gene3D G3DSA:3.30.230.10 541 767 3.8E-91 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL543_00775 d8e1d7840a4180cd0862af8fbda94a68 786 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 649 752 9.3E-10 T 11-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 AL543_00775 d8e1d7840a4180cd0862af8fbda94a68 786 SUPERFAMILY SSF54211 564 756 4.93E-35 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL543_00775 d8e1d7840a4180cd0862af8fbda94a68 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 706 724 4.7E-7 T 11-10-2018 AL543_00775 d8e1d7840a4180cd0862af8fbda94a68 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 676 695 4.7E-7 T 11-10-2018 AL543_00775 d8e1d7840a4180cd0862af8fbda94a68 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 646 665 4.7E-7 T 11-10-2018 AL543_00775 d8e1d7840a4180cd0862af8fbda94a68 786 Pfam PF13654 AAA domain 25 539 2.3E-183 T 11-10-2018 AL543_16460 7befc4f1fbccd37378e7ce06e7f80f3f 483 SUPERFAMILY SSF53720 6 478 6.54E-175 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AL543_16460 7befc4f1fbccd37378e7ce06e7f80f3f 483 Pfam PF00171 Aldehyde dehydrogenase family 19 475 5.6E-174 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AL543_16460 7befc4f1fbccd37378e7ce06e7f80f3f 483 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 253 260 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AL543_16460 7befc4f1fbccd37378e7ce06e7f80f3f 483 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 29 474 5.3E-214 T 11-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 AL543_16460 7befc4f1fbccd37378e7ce06e7f80f3f 483 Gene3D G3DSA:3.40.605.10 19 471 4.3E-182 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AL543_16460 7befc4f1fbccd37378e7ce06e7f80f3f 483 Gene3D G3DSA:3.40.309.10 260 448 4.3E-182 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AL543_16460 7befc4f1fbccd37378e7ce06e7f80f3f 483 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 281 292 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AL543_05140 b3dd2f2080652a8ba460dd826f5585f6 105 Gene3D G3DSA:3.30.110.70 1 105 1.3E-32 T 11-10-2018 AL543_05140 b3dd2f2080652a8ba460dd826f5585f6 105 Pfam PF01906 Putative heavy-metal-binding 1 103 9.7E-38 T 11-10-2018 IPR002765 Uncharacterised protein family UPF0145 AL543_05140 b3dd2f2080652a8ba460dd826f5585f6 105 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 103 25.14 T 11-10-2018 IPR002765 Uncharacterised protein family UPF0145 AL543_05140 b3dd2f2080652a8ba460dd826f5585f6 105 SUPERFAMILY SSF117782 1 104 7.72E-37 T 11-10-2018 IPR035439 UPF0145 domain superfamily AL543_05205 b3dd2f2080652a8ba460dd826f5585f6 105 Gene3D G3DSA:3.30.110.70 1 105 1.3E-32 T 11-10-2018 AL543_05205 b3dd2f2080652a8ba460dd826f5585f6 105 Pfam PF01906 Putative heavy-metal-binding 1 103 9.7E-38 T 11-10-2018 IPR002765 Uncharacterised protein family UPF0145 AL543_05205 b3dd2f2080652a8ba460dd826f5585f6 105 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 103 25.14 T 11-10-2018 IPR002765 Uncharacterised protein family UPF0145 AL543_05205 b3dd2f2080652a8ba460dd826f5585f6 105 SUPERFAMILY SSF117782 1 104 7.72E-37 T 11-10-2018 IPR035439 UPF0145 domain superfamily AL543_15860 076372704690794cbb7b0b8d13aace9f 204 Pfam PF00293 NUDIX domain 43 149 2.8E-15 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL543_15860 076372704690794cbb7b0b8d13aace9f 204 Gene3D G3DSA:3.90.79.10 16 197 6.3E-49 T 11-10-2018 AL543_15860 076372704690794cbb7b0b8d13aace9f 204 SUPERFAMILY SSF55811 16 190 5.55E-35 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AL543_14900 21453eb32b393447265b1d2e66992bbd 242 Gene3D G3DSA:3.40.50.720 1 241 4.9E-45 T 11-10-2018 AL543_14900 21453eb32b393447265b1d2e66992bbd 242 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 128 156 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL543_14900 21453eb32b393447265b1d2e66992bbd 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 3.6E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_14900 21453eb32b393447265b1d2e66992bbd 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 160 3.6E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_14900 21453eb32b393447265b1d2e66992bbd 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 179 3.6E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_14900 21453eb32b393447265b1d2e66992bbd 242 Pfam PF00106 short chain dehydrogenase 2 181 5.7E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_14900 21453eb32b393447265b1d2e66992bbd 242 SUPERFAMILY SSF51735 2 238 2.19E-45 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_16415 e79f2e76509c7d0e211c51cfe6ebd5a3 341 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 49 316 4.8E-29 T 11-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 AL543_16415 e79f2e76509c7d0e211c51cfe6ebd5a3 341 Gene3D G3DSA:3.40.190.170 30 340 9.9E-82 T 11-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily AL543_19620 ef2ed308ecf2406b710144eb5dbe6c79 329 SUPERFAMILY SSF50341 183 317 9.94E-14 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AL543_19620 ef2ed308ecf2406b710144eb5dbe6c79 329 PIRSF PIRSF020479 4 329 1.0E-132 T 11-10-2018 IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like AL543_19620 ef2ed308ecf2406b710144eb5dbe6c79 329 Pfam PF01584 CheW-like domain 185 317 2.4E-14 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AL543_19620 ef2ed308ecf2406b710144eb5dbe6c79 329 SMART SM00260 181 315 0.0017 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AL543_12940 e204de53c1729cdc41810d7eb4da0abb 267 Gene3D G3DSA:3.30.540.10 1 140 3.6E-51 T 11-10-2018 AL543_12940 e204de53c1729cdc41810d7eb4da0abb 267 Pfam PF00459 Inositol monophosphatase family 2 259 8.6E-70 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL543_12940 e204de53c1729cdc41810d7eb4da0abb 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 11-10-2018 IPR020583 Inositol monophosphatase, metal-binding site AL543_12940 e204de53c1729cdc41810d7eb4da0abb 267 Gene3D G3DSA:3.40.190.80 144 266 1.2E-37 T 11-10-2018 AL543_12940 e204de53c1729cdc41810d7eb4da0abb 267 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 11-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 AL543_12940 e204de53c1729cdc41810d7eb4da0abb 267 SUPERFAMILY SSF56655 1 262 2.88E-84 T 11-10-2018 AL543_12940 e204de53c1729cdc41810d7eb4da0abb 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 2.9E-58 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL543_12940 e204de53c1729cdc41810d7eb4da0abb 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 2.9E-58 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL543_12940 e204de53c1729cdc41810d7eb4da0abb 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 2.9E-58 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL543_12940 e204de53c1729cdc41810d7eb4da0abb 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 2.9E-58 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL543_12940 e204de53c1729cdc41810d7eb4da0abb 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 2.9E-58 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL543_12940 e204de53c1729cdc41810d7eb4da0abb 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 2.9E-58 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL543_12940 e204de53c1729cdc41810d7eb4da0abb 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 2.5E-32 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AL543_12940 e204de53c1729cdc41810d7eb4da0abb 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 2.5E-32 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AL543_12940 e204de53c1729cdc41810d7eb4da0abb 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 2.5E-32 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AL543_12940 e204de53c1729cdc41810d7eb4da0abb 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 2.5E-32 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AL543_13950 96fe9fe0766f175f10df5abd369ad84f 396 Pfam PF01494 FAD binding domain 14 343 6.9E-30 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 AL543_13950 96fe9fe0766f175f10df5abd369ad84f 396 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 15 393 3.1E-118 T 11-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 AL543_13950 96fe9fe0766f175f10df5abd369ad84f 396 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 15 37 1.9E-20 T 11-10-2018 AL543_13950 96fe9fe0766f175f10df5abd369ad84f 396 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 288 303 1.9E-20 T 11-10-2018 AL543_13950 96fe9fe0766f175f10df5abd369ad84f 396 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 165 180 1.9E-20 T 11-10-2018 AL543_13950 96fe9fe0766f175f10df5abd369ad84f 396 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 303 319 1.9E-20 T 11-10-2018 AL543_13950 96fe9fe0766f175f10df5abd369ad84f 396 Gene3D G3DSA:3.30.9.50 90 277 7.4E-102 T 11-10-2018 AL543_13950 96fe9fe0766f175f10df5abd369ad84f 396 Gene3D G3DSA:3.50.50.60 15 341 7.4E-102 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_13950 96fe9fe0766f175f10df5abd369ad84f 396 SUPERFAMILY SSF51905 13 387 1.81E-61 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_20530 a47d3e7327971fb1829befe3f204a1c7 245 Gene3D G3DSA:3.40.50.150 52 211 2.5E-12 T 11-10-2018 AL543_20530 a47d3e7327971fb1829befe3f204a1c7 245 SUPERFAMILY SSF53335 71 212 7.53E-19 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL543_20530 a47d3e7327971fb1829befe3f204a1c7 245 Pfam PF08241 Methyltransferase domain 70 125 3.3E-8 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AL543_16180 76d0865d52ac00573ae2b54db80a04b4 231 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 205 9.2E-83 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AL543_16180 76d0865d52ac00573ae2b54db80a04b4 231 SUPERFAMILY SSF52402 1 211 1.48E-67 T 11-10-2018 AL543_16180 76d0865d52ac00573ae2b54db80a04b4 231 Gene3D G3DSA:3.40.50.620 1 230 1.2E-78 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL543_16180 76d0865d52ac00573ae2b54db80a04b4 231 PIRSF PIRSF006293 1 223 2.0E-82 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AL543_16180 76d0865d52ac00573ae2b54db80a04b4 231 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 218 50.632 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AL543_16180 76d0865d52ac00573ae2b54db80a04b4 231 Pfam PF06508 Queuosine biosynthesis protein QueC 3 212 3.6E-85 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AL543_01785 e6d324644b0e071511577dbf20ccc3ca 470 Hamap MF_00675 Uronate isomerase [uxaC]. 2 468 50.296 T 11-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 AL543_01785 e6d324644b0e071511577dbf20ccc3ca 470 SUPERFAMILY SSF51556 2 466 1.73E-182 T 11-10-2018 IPR032466 Metal-dependent hydrolase AL543_01785 e6d324644b0e071511577dbf20ccc3ca 470 Gene3D G3DSA:3.20.20.140 7 466 8.9E-203 T 11-10-2018 AL543_01785 e6d324644b0e071511577dbf20ccc3ca 470 Gene3D G3DSA:1.10.2020.10 46 137 8.9E-203 T 11-10-2018 AL543_01785 e6d324644b0e071511577dbf20ccc3ca 470 Pfam PF02614 Glucuronate isomerase 1 466 4.5E-229 T 11-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 AL543_07830 75976c6be7275e5e0b3bffca2b619b15 274 Gene3D G3DSA:2.40.50.140 1 114 5.3E-50 T 11-10-2018 AL543_07830 75976c6be7275e5e0b3bffca2b619b15 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 8.3E-34 T 11-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_07830 75976c6be7275e5e0b3bffca2b619b15 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 1.1E-130 T 11-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 AL543_07830 75976c6be7275e5e0b3bffca2b619b15 274 SUPERFAMILY SSF50104 127 272 4.81E-61 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily AL543_07830 75976c6be7275e5e0b3bffca2b619b15 274 SMART SM01382 124 252 2.5E-91 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 AL543_07830 75976c6be7275e5e0b3bffca2b619b15 274 Gene3D G3DSA:4.10.950.10 196 274 1.5E-36 T 11-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07830 75976c6be7275e5e0b3bffca2b619b15 274 SUPERFAMILY SSF50249 2 125 1.71E-49 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL543_07830 75976c6be7275e5e0b3bffca2b619b15 274 PIRSF PIRSF002158 13 274 2.4E-102 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_07830 75976c6be7275e5e0b3bffca2b619b15 274 Gene3D G3DSA:2.30.30.30 115 195 3.1E-32 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 AL543_07830 75976c6be7275e5e0b3bffca2b619b15 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 11-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07830 75976c6be7275e5e0b3bffca2b619b15 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 1.4E-55 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 AL543_07830 75976c6be7275e5e0b3bffca2b619b15 274 SMART SM01383 42 118 9.3E-47 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_07830 75976c6be7275e5e0b3bffca2b619b15 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 47.088 T 11-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 AL543_00785 3143f158495ca674812ecc98ab907841 539 ProSitePatterns PS00211 ABC transporters family signature. 427 441 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_00785 3143f158495ca674812ecc98ab907841 539 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_00785 3143f158495ca674812ecc98ab907841 539 SMART SM00382 312 504 2.2E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_00785 3143f158495ca674812ecc98ab907841 539 SMART SM00382 35 235 3.6E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_00785 3143f158495ca674812ecc98ab907841 539 Pfam PF00005 ABC transporter 304 455 1.4E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_00785 3143f158495ca674812ecc98ab907841 539 Gene3D G3DSA:3.40.50.300 4 279 9.6E-84 T 11-10-2018 AL543_00785 3143f158495ca674812ecc98ab907841 539 Gene3D G3DSA:3.40.50.300 280 538 1.1E-84 T 11-10-2018 AL543_00785 3143f158495ca674812ecc98ab907841 539 Pfam PF00005 ABC transporter 26 185 4.7E-26 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_00785 3143f158495ca674812ecc98ab907841 539 SUPERFAMILY SSF52540 295 526 5.94E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_00785 3143f158495ca674812ecc98ab907841 539 SUPERFAMILY SSF52540 6 256 7.31E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_00785 3143f158495ca674812ecc98ab907841 539 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 264 5.0E-6 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL543_00785 3143f158495ca674812ecc98ab907841 539 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 506 533 3.3E-4 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL543_10225 125c29750326633a667d57414ca45995 259 Gene3D G3DSA:3.90.550.10 2 212 2.5E-21 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL543_10225 125c29750326633a667d57414ca45995 259 Pfam PF00535 Glycosyl transferase family 2 8 128 6.1E-15 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AL543_10225 125c29750326633a667d57414ca45995 259 SUPERFAMILY SSF53448 3 145 7.39E-24 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL543_03950 c87132b359677eac19aa6c1a4e3eb536 240 SUPERFAMILY SSF53335 14 113 3.19E-9 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL543_03950 c87132b359677eac19aa6c1a4e3eb536 240 Pfam PF12847 Methyltransferase domain 4 160 2.1E-21 T 11-10-2018 AL543_03950 c87132b359677eac19aa6c1a4e3eb536 240 Gene3D G3DSA:3.40.50.150 2 166 8.5E-41 T 11-10-2018 AL543_03950 c87132b359677eac19aa6c1a4e3eb536 240 PIRSF PIRSF028234 1 234 9.2E-121 T 11-10-2018 IPR016876 Uncharacterised conserved protein UCP028234 AL543_10695 c71d8d323568f3585c8f87f14d127938 162 Pfam PF00466 Ribosomal protein L10 5 101 1.8E-26 T 11-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 AL543_10695 c71d8d323568f3585c8f87f14d127938 162 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 159 23.936 T 11-10-2018 IPR022973 Ribosomal protein L10 AL543_10695 c71d8d323568f3585c8f87f14d127938 162 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 11-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_10695 c71d8d323568f3585c8f87f14d127938 162 SUPERFAMILY SSF160369 4 158 4.71E-44 T 11-10-2018 AL543_10695 c71d8d323568f3585c8f87f14d127938 162 Gene3D G3DSA:3.30.70.1730 1 124 6.2E-34 T 11-10-2018 AL543_19765 d7a57ceba8153f7d7fedb47154ac77a8 130 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 9 127 5.1E-39 T 11-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL543_19765 d7a57ceba8153f7d7fedb47154ac77a8 130 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 8 124 7.1E-29 T 11-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL543_19765 d7a57ceba8153f7d7fedb47154ac77a8 130 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 86 99 - T 11-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL543_19765 d7a57ceba8153f7d7fedb47154ac77a8 130 SUPERFAMILY SSF81343 8 130 4.36E-33 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL543_19765 d7a57ceba8153f7d7fedb47154ac77a8 130 PIRSF PIRSF000178 2 130 4.6E-31 T 11-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL543_19765 d7a57ceba8153f7d7fedb47154ac77a8 130 Gene3D G3DSA:1.20.1300.10 5 130 7.2E-43 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL543_19765 d7a57ceba8153f7d7fedb47154ac77a8 130 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 11 35 - T 11-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL543_05870 7bf71e47885a0dacb04057a224b43061 462 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 422 2.9E-57 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL543_05870 7bf71e47885a0dacb04057a224b43061 462 Pfam PF01554 MatE 261 412 1.4E-18 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL543_05870 7bf71e47885a0dacb04057a224b43061 462 Pfam PF01554 MatE 22 181 5.5E-33 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL543_05870 7bf71e47885a0dacb04057a224b43061 462 PIRSF PIRSF006603 4 459 5.0E-69 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL543_13390 e18711f277f349f35b6da7127ff7b6b4 144 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 135 1.2E-30 T 11-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 AL543_13390 e18711f277f349f35b6da7127ff7b6b4 144 Gene3D G3DSA:3.30.530.20 1 144 1.7E-38 T 11-10-2018 IPR023393 START-like domain superfamily AL543_13390 e18711f277f349f35b6da7127ff7b6b4 144 SUPERFAMILY SSF55961 1 143 2.12E-34 T 11-10-2018 AL543_13975 bb571cb32cf6bf092dd12efeb50c58f2 322 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 311 1.3E-135 T 11-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 AL543_13975 bb571cb32cf6bf092dd12efeb50c58f2 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 299 7.3E-68 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AL543_13975 bb571cb32cf6bf092dd12efeb50c58f2 322 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 311 1.9E-142 T 11-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 AL543_13975 bb571cb32cf6bf092dd12efeb50c58f2 322 SUPERFAMILY SSF53686 3 313 2.88E-96 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL543_13975 bb571cb32cf6bf092dd12efeb50c58f2 322 Gene3D G3DSA:3.40.50.1100 43 145 8.7E-126 T 11-10-2018 AL543_13975 bb571cb32cf6bf092dd12efeb50c58f2 322 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 11-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 AL543_13975 bb571cb32cf6bf092dd12efeb50c58f2 322 Gene3D G3DSA:3.40.50.1100 12 306 8.7E-126 T 11-10-2018 AL543_16985 f43d3188565b767902e5c76c594b00ec 392 SUPERFAMILY SSF48452 244 368 1.77E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_16985 f43d3188565b767902e5c76c594b00ec 392 SUPERFAMILY SSF48452 32 232 2.88E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_16985 f43d3188565b767902e5c76c594b00ec 392 Gene3D G3DSA:1.25.40.10 180 391 1.8E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_16985 f43d3188565b767902e5c76c594b00ec 392 Gene3D G3DSA:1.25.40.10 28 179 4.3E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_08010 c8400e818147b909444c4765e457b395 578 Gene3D G3DSA:3.30.1370.120 259 326 5.2E-11 T 11-10-2018 IPR038591 NolW-like superfamily AL543_08010 c8400e818147b909444c4765e457b395 578 Pfam PF03958 Bacterial type II/III secretion system short domain 262 327 4.1E-12 T 11-10-2018 IPR005644 NolW-like AL543_08010 c8400e818147b909444c4765e457b395 578 Pfam PF00263 Bacterial type II and III secretion system protein 418 576 6.4E-46 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 AL543_08010 c8400e818147b909444c4765e457b395 578 SMART SM00965 188 236 1.6E-9 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL543_08010 c8400e818147b909444c4765e457b395 578 PRINTS PR00811 Bacterial general secretion pathway protein D signature 541 559 4.7E-20 T 11-10-2018 IPR001775 GspD/PilQ family AL543_08010 c8400e818147b909444c4765e457b395 578 PRINTS PR00811 Bacterial general secretion pathway protein D signature 327 337 4.7E-20 T 11-10-2018 IPR001775 GspD/PilQ family AL543_08010 c8400e818147b909444c4765e457b395 578 PRINTS PR00811 Bacterial general secretion pathway protein D signature 564 578 4.7E-20 T 11-10-2018 IPR001775 GspD/PilQ family AL543_08010 c8400e818147b909444c4765e457b395 578 PRINTS PR00811 Bacterial general secretion pathway protein D signature 449 459 4.7E-20 T 11-10-2018 IPR001775 GspD/PilQ family AL543_08010 c8400e818147b909444c4765e457b395 578 PRINTS PR00811 Bacterial general secretion pathway protein D signature 414 438 4.7E-20 T 11-10-2018 IPR001775 GspD/PilQ family AL543_08010 c8400e818147b909444c4765e457b395 578 Gene3D G3DSA:3.55.50.30 146 258 4.6E-37 T 11-10-2018 AL543_08010 c8400e818147b909444c4765e457b395 578 Gene3D G3DSA:2.60.40.3470 25 145 1.1E-16 T 11-10-2018 AL543_08010 c8400e818147b909444c4765e457b395 578 Pfam PF07660 Secretin and TonB N terminus short domain 188 236 3.3E-7 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL543_08010 c8400e818147b909444c4765e457b395 578 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 163 576 7.6E-161 T 11-10-2018 IPR013355 Type IV pilus secretin PilQ AL543_08010 c8400e818147b909444c4765e457b395 578 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 522 555 - T 11-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 AL543_05090 cb1229bf3cb53fd1805ec2118c6fadfc 158 Gene3D G3DSA:3.40.630.30 1 158 2.2E-27 T 11-10-2018 AL543_05090 cb1229bf3cb53fd1805ec2118c6fadfc 158 SUPERFAMILY SSF55729 1 158 3.01E-24 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL543_05090 cb1229bf3cb53fd1805ec2118c6fadfc 158 Pfam PF13673 Acetyltransferase (GNAT) domain 39 138 1.6E-13 T 11-10-2018 IPR000182 GNAT domain AL543_03210 89177f66c58a94643149cae9e02ed643 171 Pfam PF00293 NUDIX domain 33 145 1.2E-16 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL543_03210 89177f66c58a94643149cae9e02ed643 171 ProSitePatterns PS00893 Nudix box signature. 68 89 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AL543_03210 89177f66c58a94643149cae9e02ed643 171 SUPERFAMILY SSF55811 2 168 4.74E-43 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AL543_03210 89177f66c58a94643149cae9e02ed643 171 Gene3D G3DSA:3.90.79.10 1 167 5.9E-47 T 11-10-2018 AL543_15720 4d4868bd6878784145e0c381dfce8d36 372 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 50 337 1.2E-73 T 11-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 AL543_15720 4d4868bd6878784145e0c381dfce8d36 372 PIRSF PIRSF039026 14 372 1.7E-143 T 11-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like AL543_15720 4d4868bd6878784145e0c381dfce8d36 372 Gene3D G3DSA:3.40.190.10 166 337 1.1E-116 T 11-10-2018 AL543_15720 4d4868bd6878784145e0c381dfce8d36 372 Gene3D G3DSA:3.40.190.170 49 358 1.1E-116 T 11-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily AL543_00025 2356e4d2f93630085eb132ca2b641b7c 343 PIRSF PIRSF005632 1 343 1.1E-191 T 11-10-2018 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit AL543_00025 2356e4d2f93630085eb132ca2b641b7c 343 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 5 330 4.1E-35 T 11-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AL543_00025 2356e4d2f93630085eb132ca2b641b7c 343 SUPERFAMILY SSF51726 7 341 1.96E-65 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 AL543_00025 2356e4d2f93630085eb132ca2b641b7c 343 Gene3D G3DSA:3.20.20.210 1 343 3.9E-132 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 AL543_07800 adcc2cc976f296b1387788d5351e0cbc 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 1.1E-14 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_07800 adcc2cc976f296b1387788d5351e0cbc 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 1.1E-14 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_07800 adcc2cc976f296b1387788d5351e0cbc 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 1.1E-14 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_07800 adcc2cc976f296b1387788d5351e0cbc 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 76 2.7E-38 T 11-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_07800 adcc2cc976f296b1387788d5351e0cbc 84 Pfam PF00366 Ribosomal protein S17 10 77 1.0E-34 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_07800 adcc2cc976f296b1387788d5351e0cbc 84 SUPERFAMILY SSF50249 6 83 2.83E-34 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL543_07800 adcc2cc976f296b1387788d5351e0cbc 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 1 76 5.0E-39 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_07800 adcc2cc976f296b1387788d5351e0cbc 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 11-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07800 adcc2cc976f296b1387788d5351e0cbc 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 5 80 25.251 T 11-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_07800 adcc2cc976f296b1387788d5351e0cbc 84 Gene3D G3DSA:2.40.50.140 1 84 2.7E-39 T 11-10-2018 AL543_05120 fe8989de9aa53799c245d4940b1641bc 105 Gene3D G3DSA:3.30.110.70 1 105 5.0E-32 T 11-10-2018 AL543_05120 fe8989de9aa53799c245d4940b1641bc 105 SUPERFAMILY SSF117782 1 104 2.75E-36 T 11-10-2018 IPR035439 UPF0145 domain superfamily AL543_05120 fe8989de9aa53799c245d4940b1641bc 105 Pfam PF01906 Putative heavy-metal-binding 1 103 2.6E-37 T 11-10-2018 IPR002765 Uncharacterised protein family UPF0145 AL543_05120 fe8989de9aa53799c245d4940b1641bc 105 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 103 24.916 T 11-10-2018 IPR002765 Uncharacterised protein family UPF0145 AL543_06610 65c401a34a017b50f988527226ffe309 226 SUPERFAMILY SSF52141 6 221 2.18E-97 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL543_06610 65c401a34a017b50f988527226ffe309 226 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 11-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL543_06610 65c401a34a017b50f988527226ffe309 226 SMART SM00986 49 210 3.0E-40 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL543_06610 65c401a34a017b50f988527226ffe309 226 SMART SM00987 49 210 3.0E-40 T 11-10-2018 AL543_06610 65c401a34a017b50f988527226ffe309 226 Gene3D G3DSA:3.40.470.10 1 226 2.0E-107 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL543_06610 65c401a34a017b50f988527226ffe309 226 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 6 214 7.9E-89 T 11-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL543_06610 65c401a34a017b50f988527226ffe309 226 Pfam PF03167 Uracil DNA glycosylase superfamily 55 209 4.4E-25 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL543_06610 65c401a34a017b50f988527226ffe309 226 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 221 40.488 T 11-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL543_19135 6990f08c181ce80796af101cb5194a01 288 Pfam PF00378 Enoyl-CoA hydratase/isomerase 34 282 4.3E-78 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AL543_19135 6990f08c181ce80796af101cb5194a01 288 Gene3D G3DSA:3.90.226.10 4 225 6.8E-84 T 11-10-2018 AL543_19135 6990f08c181ce80796af101cb5194a01 288 TIGRFAM TIGR01929 menB: naphthoate synthase 25 284 9.7E-145 T 11-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 AL543_19135 6990f08c181ce80796af101cb5194a01 288 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 18 287 56.41 T 11-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 AL543_19135 6990f08c181ce80796af101cb5194a01 288 SUPERFAMILY SSF52096 17 284 6.12E-79 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AL543_19135 6990f08c181ce80796af101cb5194a01 288 Gene3D G3DSA:1.10.12.10 226 276 2.7E-31 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal AL543_19135 6990f08c181ce80796af101cb5194a01 288 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 126 146 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 AL543_17065 52608dfcd8a7dd420a2732c57172328f 478 Gene3D G3DSA:3.20.20.80 1 478 8.5E-171 T 11-10-2018 AL543_17065 52608dfcd8a7dd420a2732c57172328f 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 440 452 8.4E-16 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AL543_17065 52608dfcd8a7dd420a2732c57172328f 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 372 380 8.4E-16 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AL543_17065 52608dfcd8a7dd420a2732c57172328f 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 415 432 8.4E-16 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AL543_17065 52608dfcd8a7dd420a2732c57172328f 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 306 320 8.4E-16 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AL543_17065 52608dfcd8a7dd420a2732c57172328f 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 393 404 8.4E-16 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AL543_17065 52608dfcd8a7dd420a2732c57172328f 478 SUPERFAMILY SSF51445 2 471 3.87E-166 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AL543_17065 52608dfcd8a7dd420a2732c57172328f 478 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 10 24 - T 11-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site AL543_17065 52608dfcd8a7dd420a2732c57172328f 478 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 372 380 - T 11-10-2018 IPR018120 Glycoside hydrolase family 1, active site AL543_17065 52608dfcd8a7dd420a2732c57172328f 478 Pfam PF00232 Glycosyl hydrolase family 1 4 475 3.2E-137 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AL543_09050 e2da05304bd5d02eae40407feb6c1ba0 289 SUPERFAMILY SSF53335 37 271 6.09E-34 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL543_09050 e2da05304bd5d02eae40407feb6c1ba0 289 Gene3D G3DSA:3.40.50.150 29 248 1.5E-18 T 11-10-2018 AL543_09050 e2da05304bd5d02eae40407feb6c1ba0 289 PIRSF PIRSF028177 22 289 3.6E-90 T 11-10-2018 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP GO:0017000|GO:1901106 AL543_09050 e2da05304bd5d02eae40407feb6c1ba0 289 Pfam PF04072 Leucine carboxyl methyltransferase 89 147 7.1E-5 T 11-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 AL543_05515 7a35d722990e05e1890b692b58f600d4 105 ProDom PD012578 PLASMID TOXIN CCDB CYTOTOXIC LETB POST-SEGREGATION SYSTEM CCDB-LIKE GYRASE FUSED-CCDB 18 104 2.0E-37 T 11-10-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 AL543_05515 7a35d722990e05e1890b692b58f600d4 105 Pfam PF01845 CcdB protein 3 104 2.3E-35 T 11-10-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 AL543_05515 7a35d722990e05e1890b692b58f600d4 105 Gene3D G3DSA:2.30.30.110 1 105 1.8E-40 T 11-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor AL543_05515 7a35d722990e05e1890b692b58f600d4 105 SUPERFAMILY SSF50118 3 105 9.16E-32 T 11-10-2018 AL543_12140 f0a5f4d07edca635e279700d6e82da6e 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 3.1E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL543_12140 f0a5f4d07edca635e279700d6e82da6e 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 11-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 AL543_12140 f0a5f4d07edca635e279700d6e82da6e 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 11-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 AL543_12140 f0a5f4d07edca635e279700d6e82da6e 112 Gene3D G3DSA:3.30.70.120 1 112 2.3E-47 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AL543_12140 f0a5f4d07edca635e279700d6e82da6e 112 SUPERFAMILY SSF54913 1 112 5.4E-46 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AL543_12140 f0a5f4d07edca635e279700d6e82da6e 112 PRINTS PR00340 P-II protein signature 52 75 7.1E-42 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL543_12140 f0a5f4d07edca635e279700d6e82da6e 112 PRINTS PR00340 P-II protein signature 23 41 7.1E-42 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL543_12140 f0a5f4d07edca635e279700d6e82da6e 112 PRINTS PR00340 P-II protein signature 83 103 7.1E-42 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL543_12140 f0a5f4d07edca635e279700d6e82da6e 112 PRINTS PR00340 P-II protein signature 2 17 7.1E-42 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL543_12140 f0a5f4d07edca635e279700d6e82da6e 112 SMART SM00938 4 105 1.3E-69 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL543_12140 f0a5f4d07edca635e279700d6e82da6e 112 PIRSF PIRSF039144 1 112 2.4E-56 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL543_14080 a89268217a71f2365d4afeaf65de1d8d 165 Gene3D G3DSA:3.30.70.940 1 164 1.6E-50 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AL543_14080 a89268217a71f2365d4afeaf65de1d8d 165 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 1 165 47.972 T 11-10-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 AL543_14080 a89268217a71f2365d4afeaf65de1d8d 165 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 4 163 2.3E-73 T 11-10-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 AL543_14080 a89268217a71f2365d4afeaf65de1d8d 165 Pfam PF02357 Transcription termination factor nusG 2 91 3.4E-18 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AL543_14080 a89268217a71f2365d4afeaf65de1d8d 165 SUPERFAMILY SSF82679 1 100 5.23E-28 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AL543_14080 a89268217a71f2365d4afeaf65de1d8d 165 SMART SM00738 1 101 2.7E-29 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AL543_14495 6a6d9497def52b5240dabb128c9c0952 436 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 9 336 4.4E-107 T 11-10-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase AL543_14495 6a6d9497def52b5240dabb128c9c0952 436 SUPERFAMILY SSF51905 162 335 1.21E-9 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_14495 6a6d9497def52b5240dabb128c9c0952 436 Gene3D G3DSA:3.50.50.60 1 421 4.7E-119 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_14495 6a6d9497def52b5240dabb128c9c0952 436 SUPERFAMILY SSF51905 6 225 1.3E-20 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_05770 9ece9bee5eae62549bc70e94eaa27e35 394 Pfam PF07470 Glycosyl Hydrolase Family 88 53 384 2.2E-25 T 11-10-2018 IPR010905 Glycosyl hydrolase, family 88 AL543_05770 9ece9bee5eae62549bc70e94eaa27e35 394 SUPERFAMILY SSF48208 25 394 4.99E-99 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AL543_05770 9ece9bee5eae62549bc70e94eaa27e35 394 Gene3D G3DSA:1.50.10.10 14 394 4.6E-115 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 AL543_11515 65b36a08e96c39761aaea6610a53807a 391 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 378 2.9E-134 T 11-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 AL543_11515 65b36a08e96c39761aaea6610a53807a 391 SMART SM00729 6 227 4.7E-57 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AL543_11515 65b36a08e96c39761aaea6610a53807a 391 Pfam PF06969 HemN C-terminal domain 314 374 3.3E-10 T 11-10-2018 IPR010723 HemN, C-terminal AL543_11515 65b36a08e96c39761aaea6610a53807a 391 Gene3D G3DSA:3.80.30.20 2 309 9.5E-98 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AL543_11515 65b36a08e96c39761aaea6610a53807a 391 SUPERFAMILY SSF102114 4 386 1.44E-112 T 11-10-2018 AL543_11515 65b36a08e96c39761aaea6610a53807a 391 Pfam PF04055 Radical SAM superfamily 11 181 4.8E-18 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL543_06355 d03599f3f7d7e758d81a5b4f6e768a49 260 SUPERFAMILY SSF111364 30 260 2.22E-85 T 11-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 AL543_06355 d03599f3f7d7e758d81a5b4f6e768a49 260 Gene3D G3DSA:2.40.230.20 23 260 3.8E-78 T 11-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 AL543_06355 d03599f3f7d7e758d81a5b4f6e768a49 260 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 30 260 1.8E-99 T 11-10-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 AL543_00010 7fe96cba5e90c7077ea2d33e86ccf88b 794 SUPERFAMILY SSF53649 67 587 1.38E-134 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AL543_00010 7fe96cba5e90c7077ea2d33e86ccf88b 794 Pfam PF00884 Sulfatase 67 481 2.2E-82 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 AL543_00010 7fe96cba5e90c7077ea2d33e86ccf88b 794 ProSitePatterns PS00523 Sulfatases signature 1. 111 123 - T 11-10-2018 IPR024607 Sulfatase, conserved site AL543_00010 7fe96cba5e90c7077ea2d33e86ccf88b 794 Gene3D G3DSA:3.30.1120.10 509 603 9.8E-21 T 11-10-2018 AL543_00010 7fe96cba5e90c7077ea2d33e86ccf88b 794 Gene3D G3DSA:3.40.720.10 65 508 3.9E-115 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AL543_18585 013276bf855f6529c602d4f24a444684 178 Gene3D G3DSA:3.40.630.30 1 178 7.8E-49 T 11-10-2018 AL543_18585 013276bf855f6529c602d4f24a444684 178 SUPERFAMILY SSF55729 2 177 2.84E-45 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL543_18585 013276bf855f6529c602d4f24a444684 178 Pfam PF13302 Acetyltransferase (GNAT) domain 11 152 1.3E-25 T 11-10-2018 IPR000182 GNAT domain AL543_16510 e7c73072b85f578a607b72bed2139f79 458 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 92 107 - T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL543_16510 e7c73072b85f578a607b72bed2139f79 458 Pfam PF01235 Sodium:alanine symporter family 54 449 2.0E-140 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL543_16510 e7c73072b85f578a607b72bed2139f79 458 PRINTS PR00175 Sodium/alanine symporter signature 412 432 9.0E-52 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL543_16510 e7c73072b85f578a607b72bed2139f79 458 PRINTS PR00175 Sodium/alanine symporter signature 92 114 9.0E-52 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL543_16510 e7c73072b85f578a607b72bed2139f79 458 PRINTS PR00175 Sodium/alanine symporter signature 307 325 9.0E-52 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL543_16510 e7c73072b85f578a607b72bed2139f79 458 PRINTS PR00175 Sodium/alanine symporter signature 184 202 9.0E-52 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL543_16510 e7c73072b85f578a607b72bed2139f79 458 PRINTS PR00175 Sodium/alanine symporter signature 212 231 9.0E-52 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL543_16510 e7c73072b85f578a607b72bed2139f79 458 PRINTS PR00175 Sodium/alanine symporter signature 353 375 9.0E-52 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL543_16510 e7c73072b85f578a607b72bed2139f79 458 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 443 7.0E-156 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL543_19640 f149257811898724c920d654708381c6 239 Gene3D G3DSA:1.10.287.500 55 189 4.6E-47 T 11-10-2018 AL543_19640 f149257811898724c920d654708381c6 239 PIRSF PIRSF002884 13 239 2.9E-92 T 11-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 AL543_19640 f149257811898724c920d654708381c6 239 SUPERFAMILY SSF75708 28 238 4.32E-66 T 11-10-2018 AL543_19640 f149257811898724c920d654708381c6 239 Pfam PF04344 Chemotaxis phosphatase, CheZ 36 239 3.4E-77 T 11-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 AL543_02295 94f6177e9c5fdd296cba71c19d0dfe52 147 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 11-10-2018 IPR002178 PTS EIIA type-2 domain AL543_02295 94f6177e9c5fdd296cba71c19d0dfe52 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 146 5.8E-34 T 11-10-2018 IPR002178 PTS EIIA type-2 domain AL543_02295 94f6177e9c5fdd296cba71c19d0dfe52 147 Gene3D G3DSA:3.40.930.10 1 147 9.2E-55 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AL543_02295 94f6177e9c5fdd296cba71c19d0dfe52 147 SUPERFAMILY SSF55804 1 146 8.5E-41 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AL543_16855 a9ecffbade0bebe121bceaa6c4c766d0 218 Gene3D G3DSA:1.10.3480.10 2 202 5.7E-45 T 11-10-2018 AL543_16855 a9ecffbade0bebe121bceaa6c4c766d0 218 SUPERFAMILY SSF89155 10 199 8.63E-55 T 11-10-2018 IPR036411 TorD-like superfamily AL543_16855 a9ecffbade0bebe121bceaa6c4c766d0 218 Pfam PF02613 Nitrate reductase delta subunit 44 164 7.2E-35 T 11-10-2018 IPR020945 DMSO/Nitrate reductase chaperone AL543_03810 1b6fd4c50a4b9ccbcea8aa71dd557758 212 Gene3D G3DSA:3.40.50.1000 23 202 3.0E-45 T 11-10-2018 IPR023214 HAD superfamily AL543_03810 1b6fd4c50a4b9ccbcea8aa71dd557758 212 Gene3D G3DSA:1.10.150.240 35 101 3.0E-45 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AL543_03810 1b6fd4c50a4b9ccbcea8aa71dd557758 212 Pfam PF13419 Haloacid dehalogenase-like hydrolase 24 200 2.9E-27 T 11-10-2018 AL543_03810 1b6fd4c50a4b9ccbcea8aa71dd557758 212 SUPERFAMILY SSF56784 20 202 2.59E-45 T 11-10-2018 IPR036412 HAD-like superfamily AL543_03810 1b6fd4c50a4b9ccbcea8aa71dd557758 212 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 139 200 3.3E-13 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL543_03810 1b6fd4c50a4b9ccbcea8aa71dd557758 212 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 20 200 7.0E-54 T 11-10-2018 IPR010976 Beta-phosphoglucomutase hydrolase AL543_17970 06ffc86eff4ef18eec8f6afe0ace70b4 233 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 6 232 37.169 T 11-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 AL543_17970 06ffc86eff4ef18eec8f6afe0ace70b4 233 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 16 86 1.7E-18 T 11-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 AL543_17970 06ffc86eff4ef18eec8f6afe0ace70b4 233 PIRSF PIRSF037208 1 233 2.0E-83 T 11-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 AL543_17970 06ffc86eff4ef18eec8f6afe0ace70b4 233 SUPERFAMILY SSF55729 81 232 2.01E-20 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL543_17970 06ffc86eff4ef18eec8f6afe0ace70b4 233 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 108 226 1.0E-32 T 11-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 AL543_08810 241ab39e777421aacd8bce50cafbde72 199 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 15 196 1.2E-57 T 11-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 AL543_08810 241ab39e777421aacd8bce50cafbde72 199 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 131 137 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AL543_08810 241ab39e777421aacd8bce50cafbde72 199 PIRSF PIRSF004553 18 198 2.1E-53 T 11-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 AL543_08810 241ab39e777421aacd8bce50cafbde72 199 Gene3D G3DSA:3.40.50.150 8 199 7.1E-65 T 11-10-2018 AL543_08810 241ab39e777421aacd8bce50cafbde72 199 SUPERFAMILY SSF53335 18 195 2.2E-55 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL543_08810 241ab39e777421aacd8bce50cafbde72 199 Pfam PF03602 Conserved hypothetical protein 95 19 194 1.4E-62 T 11-10-2018 AL543_14830 cd6d02613e582fcb6680e6dc346e894d 489 Pfam PF00990 Diguanylate cyclase, GGDEF domain 335 486 4.2E-37 T 11-10-2018 IPR000160 GGDEF domain AL543_14830 cd6d02613e582fcb6680e6dc346e894d 489 SUPERFAMILY SSF55073 340 489 4.0E-37 T 11-10-2018 IPR029787 Nucleotide cyclase AL543_14830 cd6d02613e582fcb6680e6dc346e894d 489 Gene3D G3DSA:3.30.70.270 324 489 2.1E-44 T 11-10-2018 AL543_14830 cd6d02613e582fcb6680e6dc346e894d 489 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 333 488 1.7E-41 T 11-10-2018 IPR000160 GGDEF domain AL543_14830 cd6d02613e582fcb6680e6dc346e894d 489 SMART SM00267 324 489 4.2E-41 T 11-10-2018 IPR000160 GGDEF domain AL543_01835 c1227370f79efa6a57454aa88fc1af26 283 Pfam PF12852 Cupin 3 165 6.1E-37 T 11-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain AL543_01835 c1227370f79efa6a57454aa88fc1af26 283 Gene3D G3DSA:1.10.10.60 179 230 1.6E-8 T 11-10-2018 AL543_01835 c1227370f79efa6a57454aa88fc1af26 283 Gene3D G3DSA:1.10.10.60 231 283 5.0E-18 T 11-10-2018 AL543_01835 c1227370f79efa6a57454aa88fc1af26 283 SMART SM00342 197 280 4.1E-29 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL543_01835 c1227370f79efa6a57454aa88fc1af26 283 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 264 280 4.8E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL543_01835 c1227370f79efa6a57454aa88fc1af26 283 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 249 264 4.8E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL543_01835 c1227370f79efa6a57454aa88fc1af26 283 SUPERFAMILY SSF46689 233 282 6.27E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_01835 c1227370f79efa6a57454aa88fc1af26 283 Pfam PF12833 Helix-turn-helix domain 203 281 1.2E-19 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL543_01835 c1227370f79efa6a57454aa88fc1af26 283 SUPERFAMILY SSF51215 23 163 5.49E-11 T 11-10-2018 IPR037923 Transcription regulator HTH-like AL543_01835 c1227370f79efa6a57454aa88fc1af26 283 SUPERFAMILY SSF46689 180 231 2.74E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_01835 c1227370f79efa6a57454aa88fc1af26 283 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 234 276 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL543_03430 0689f729ea3367ae4bf181c99e6fed98 229 SUPERFAMILY SSF161098 5 218 1.7E-50 T 11-10-2018 IPR035906 MetI-like superfamily AL543_03430 0689f729ea3367ae4bf181c99e6fed98 229 Gene3D G3DSA:1.10.3720.10 2 225 3.1E-60 T 11-10-2018 IPR035906 MetI-like superfamily AL543_03430 0689f729ea3367ae4bf181c99e6fed98 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 214 1.2E-22 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL543_03430 0689f729ea3367ae4bf181c99e6fed98 229 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 12 221 4.2E-73 T 11-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 AL543_00105 145cd1b940669cb110b1bf5bdde0518a 258 Pfam PF01261 Xylose isomerase-like TIM barrel 21 214 2.8E-32 T 11-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AL543_00105 145cd1b940669cb110b1bf5bdde0518a 258 Gene3D G3DSA:3.20.20.150 1 258 1.1E-77 T 11-10-2018 AL543_00105 145cd1b940669cb110b1bf5bdde0518a 258 SUPERFAMILY SSF51658 1 258 5.67E-83 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily AL543_00105 145cd1b940669cb110b1bf5bdde0518a 258 PIRSF PIRSF006241 1 258 1.5E-96 T 11-10-2018 IPR026040 Hydroxypyruvate isomerase-like AL543_18925 d90b7c36818e018f523161c3cf9dcc3b 332 Gene3D G3DSA:3.40.190.170 27 328 2.3E-88 T 11-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily AL543_18925 d90b7c36818e018f523161c3cf9dcc3b 332 PIRSF PIRSF006470 1 332 9.5E-120 T 11-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 AL543_18925 d90b7c36818e018f523161c3cf9dcc3b 332 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 33 317 4.5E-103 T 11-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 AL543_18925 d90b7c36818e018f523161c3cf9dcc3b 332 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 33 277 4.7E-76 T 11-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 AL543_15170 7073af83ecb1af9a40b969ea82fcc13f 469 Gene3D G3DSA:3.20.20.70 23 270 5.3E-178 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_15170 7073af83ecb1af9a40b969ea82fcc13f 469 SUPERFAMILY SSF51366 272 467 3.77E-55 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AL543_15170 7073af83ecb1af9a40b969ea82fcc13f 469 Pfam PF00218 Indole-3-glycerol phosphate synthase 21 266 8.7E-97 T 11-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 AL543_15170 7073af83ecb1af9a40b969ea82fcc13f 469 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 273 465 6.9E-54 T 11-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 AL543_15170 7073af83ecb1af9a40b969ea82fcc13f 469 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 65 83 - T 11-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 AL543_15170 7073af83ecb1af9a40b969ea82fcc13f 469 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 273 469 30.404 T 11-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 AL543_15170 7073af83ecb1af9a40b969ea82fcc13f 469 SUPERFAMILY SSF51366 26 269 3.65E-82 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AL543_15170 7073af83ecb1af9a40b969ea82fcc13f 469 Gene3D G3DSA:3.20.20.70 271 463 5.3E-178 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_15170 7073af83ecb1af9a40b969ea82fcc13f 469 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 18 269 35.571 T 11-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 AL543_15600 da043e46f0664dc1e6dfe19c12adec37 476 Gene3D G3DSA:1.10.1130.10 41 470 1.2E-186 T 11-10-2018 AL543_15600 da043e46f0664dc1e6dfe19c12adec37 476 SUPERFAMILY SSF48695 38 472 7.86E-161 T 11-10-2018 IPR036280 Multiheme cytochrome superfamily AL543_15600 da043e46f0664dc1e6dfe19c12adec37 476 Gene3D G3DSA:1.20.140.10 310 452 1.2E-186 T 11-10-2018 AL543_15600 da043e46f0664dc1e6dfe19c12adec37 476 Pfam PF02335 Cytochrome c552 42 471 1.3E-178 T 11-10-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 AL543_15600 da043e46f0664dc1e6dfe19c12adec37 476 Hamap MF_01182 Cytochrome c-552 [nrfA]. 3 476 58.013 T 11-10-2018 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 AL543_15600 da043e46f0664dc1e6dfe19c12adec37 476 PIRSF PIRSF000243 7 475 1.5E-127 T 11-10-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 AL543_15600 da043e46f0664dc1e6dfe19c12adec37 476 TIGRFAM TIGR03152 cyto_c552_HCOOH: formate-dependent cytochrome c nitrite reductase, c552 subunit 38 474 2.0E-244 T 11-10-2018 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 AL543_13010 7a141496c6acea48f38b1e5fb08e2e33 376 PIRSF PIRSF004640 3 366 3.8E-146 T 11-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AL543_13010 7a141496c6acea48f38b1e5fb08e2e33 376 Gene3D G3DSA:3.30.413.10 264 363 6.3E-24 T 11-10-2018 AL543_13010 7a141496c6acea48f38b1e5fb08e2e33 376 SUPERFAMILY SSF51604 26 141 1.17E-9 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AL543_13010 7a141496c6acea48f38b1e5fb08e2e33 376 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 11 353 1.3E-124 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AL543_13010 7a141496c6acea48f38b1e5fb08e2e33 376 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 9 360 34.807 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AL543_13010 7a141496c6acea48f38b1e5fb08e2e33 376 Gene3D G3DSA:3.20.20.20 1 263 1.1E-104 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL543_13010 7a141496c6acea48f38b1e5fb08e2e33 376 Pfam PF04551 GcpE protein 16 356 4.1E-131 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AL543_13010 7a141496c6acea48f38b1e5fb08e2e33 376 SUPERFAMILY SSF56014 267 356 2.06E-11 T 11-10-2018 AL543_10975 18b52eb80e63e47c4c5e2e4bdc40d6f8 153 Pfam PF13690 Chemotaxis phosphatase CheX 42 139 4.4E-22 T 11-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain AL543_10975 18b52eb80e63e47c4c5e2e4bdc40d6f8 153 Gene3D G3DSA:3.40.1550.10 1 153 1.8E-45 T 11-10-2018 IPR028976 CheC-like superfamily AL543_10975 18b52eb80e63e47c4c5e2e4bdc40d6f8 153 SUPERFAMILY SSF103039 1 153 6.8E-38 T 11-10-2018 IPR028976 CheC-like superfamily AL543_13635 ed8c0d246f44f0860e878f23b66340ef 198 Gene3D G3DSA:3.40.1580.20 17 197 9.2E-70 T 11-10-2018 IPR038228 Syd superfamily AL543_13635 ed8c0d246f44f0860e878f23b66340ef 198 Hamap MF_01104 Protein Syd [syd]. 19 197 37.595 T 11-10-2018 IPR009948 Syd GO:0009898 AL543_13635 ed8c0d246f44f0860e878f23b66340ef 198 Pfam PF07348 Syd protein (SUKH-2) 23 195 2.3E-70 T 11-10-2018 IPR009948 Syd GO:0009898 AL543_17055 75696b10712c1deb1f60fcee9b0ca75c 120 Gene3D G3DSA:3.30.1330.40 1 119 5.6E-29 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AL543_17055 75696b10712c1deb1f60fcee9b0ca75c 120 SUPERFAMILY SSF55298 1 116 5.65E-25 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AL543_17055 75696b10712c1deb1f60fcee9b0ca75c 120 Pfam PF01042 Endoribonuclease L-PSP 33 114 7.2E-16 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 AL543_01705 c7af9b64a4de996770678af7d555675d 145 SUPERFAMILY SSF82784 3 140 2.22E-43 T 11-10-2018 IPR036102 OsmC/Ohr superfamily AL543_01705 c7af9b64a4de996770678af7d555675d 145 Pfam PF02566 OsmC-like protein 43 138 2.0E-20 T 11-10-2018 IPR003718 OsmC/Ohr family AL543_01705 c7af9b64a4de996770678af7d555675d 145 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 9 140 7.7E-53 T 11-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 AL543_01705 c7af9b64a4de996770678af7d555675d 145 Gene3D G3DSA:2.20.25.10 1 48 1.0E-25 T 11-10-2018 AL543_01705 c7af9b64a4de996770678af7d555675d 145 Gene3D G3DSA:3.30.300.20 49 145 3.8E-34 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AL543_03110 37574e144f97ba98a605b2a6c8cfe077 549 Pfam PF09818 Predicted ATPase of the ABC class 2 436 8.1E-184 T 11-10-2018 IPR019195 ABC transporter, ATPase, putative AL543_03110 37574e144f97ba98a605b2a6c8cfe077 549 SUPERFAMILY SSF52540 227 406 1.0E-5 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_04055 e71e8375d288b3f6ce0a549a5792a4cd 217 Gene3D G3DSA:1.10.286.10 1 84 1.0E-34 T 11-10-2018 AL543_04055 e71e8375d288b3f6ce0a549a5792a4cd 217 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 38 216 3.8E-80 T 11-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AL543_04055 e71e8375d288b3f6ce0a549a5792a4cd 217 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 144 154 - T 11-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AL543_04055 e71e8375d288b3f6ce0a549a5792a4cd 217 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 34 217 34.452 T 11-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AL543_04055 e71e8375d288b3f6ce0a549a5792a4cd 217 SUPERFAMILY SSF55620 11 216 3.63E-74 T 11-10-2018 AL543_04055 e71e8375d288b3f6ce0a549a5792a4cd 217 Gene3D G3DSA:3.30.1130.10 85 217 7.3E-52 T 11-10-2018 AL543_04055 e71e8375d288b3f6ce0a549a5792a4cd 217 Pfam PF01227 GTP cyclohydrolase I 38 215 2.0E-64 T 11-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AL543_04055 e71e8375d288b3f6ce0a549a5792a4cd 217 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 96 112 - T 11-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AL543_19890 edbc2c570908d2b8afd0caa1fe4ef75d 186 Gene3D G3DSA:3.30.1370.110 59 185 3.7E-27 T 11-10-2018 AL543_19890 edbc2c570908d2b8afd0caa1fe4ef75d 186 Pfam PF01713 Smr domain 107 181 3.9E-18 T 11-10-2018 IPR002625 Smr domain AL543_19890 edbc2c570908d2b8afd0caa1fe4ef75d 186 SMART SM00463 104 182 8.3E-16 T 11-10-2018 IPR002625 Smr domain AL543_19890 edbc2c570908d2b8afd0caa1fe4ef75d 186 SUPERFAMILY SSF160443 105 181 1.12E-11 T 11-10-2018 IPR036063 Smr domain superfamily AL543_19890 edbc2c570908d2b8afd0caa1fe4ef75d 186 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 183 38.238 T 11-10-2018 IPR022990 Uncharacterised protein family UPF0115 AL543_07180 c56797720471193a83187775ae8c6ae9 68 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 1.1E-28 T 11-10-2018 IPR009491 Protein of unknown function DUF1107 AL543_07180 c56797720471193a83187775ae8c6ae9 68 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 63 7.0E-30 T 11-10-2018 IPR009491 Protein of unknown function DUF1107 AL543_07180 c56797720471193a83187775ae8c6ae9 68 Gene3D G3DSA:3.30.1910.10 1 63 3.2E-30 T 11-10-2018 AL543_13065 8a725dd6142dff08ef58b0ab85227f35 653 SUPERFAMILY SSF52540 1 370 5.57E-26 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_13065 8a725dd6142dff08ef58b0ab85227f35 653 Gene3D G3DSA:3.40.50.300 1 399 1.1E-30 T 11-10-2018 AL543_13065 8a725dd6142dff08ef58b0ab85227f35 653 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 27 366 5.9E-35 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL543_19910 7b5fdfa8b93b4ac286b3593437b5caa3 299 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 226 241 - T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL543_19910 7b5fdfa8b93b4ac286b3593437b5caa3 299 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 226 246 5.4E-66 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL543_19910 7b5fdfa8b93b4ac286b3593437b5caa3 299 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 119 139 5.4E-66 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL543_19910 7b5fdfa8b93b4ac286b3593437b5caa3 299 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 100 119 5.4E-66 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL543_19910 7b5fdfa8b93b4ac286b3593437b5caa3 299 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 271 296 5.4E-66 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL543_19910 7b5fdfa8b93b4ac286b3593437b5caa3 299 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 139 158 5.4E-66 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL543_19910 7b5fdfa8b93b4ac286b3593437b5caa3 299 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 247 268 5.4E-66 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL543_19910 7b5fdfa8b93b4ac286b3593437b5caa3 299 Pfam PF00813 FliP family 102 293 4.3E-79 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL543_19910 7b5fdfa8b93b4ac286b3593437b5caa3 299 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 102 297 1.0E-82 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AL543_19910 7b5fdfa8b93b4ac286b3593437b5caa3 299 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 274 286 - T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL543_19910 7b5fdfa8b93b4ac286b3593437b5caa3 299 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 158 170 4.3E-18 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AL543_19910 7b5fdfa8b93b4ac286b3593437b5caa3 299 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 98 107 4.3E-18 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AL543_19910 7b5fdfa8b93b4ac286b3593437b5caa3 299 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 170 184 4.3E-18 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AL543_19910 7b5fdfa8b93b4ac286b3593437b5caa3 299 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 287 297 4.3E-18 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AL543_19910 7b5fdfa8b93b4ac286b3593437b5caa3 299 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 219 231 4.3E-18 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AL543_19910 7b5fdfa8b93b4ac286b3593437b5caa3 299 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 198 210 4.3E-18 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AL543_09150 53516c6cfbae6fac4e58fc27279006c2 471 Gene3D G3DSA:3.40.50.300 116 284 4.0E-15 T 11-10-2018 AL543_09150 53516c6cfbae6fac4e58fc27279006c2 471 SMART SM00382 123 291 0.005 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_09150 53516c6cfbae6fac4e58fc27279006c2 471 SUPERFAMILY SSF52540 123 362 9.64E-11 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_09150 53516c6cfbae6fac4e58fc27279006c2 471 Pfam PF13401 AAA domain 127 270 1.9E-22 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_17785 e6494627a812fbcfa4c0717ed49ceb46 276 Pfam PF13460 NAD(P)H-binding 9 178 6.9E-14 T 11-10-2018 IPR016040 NAD(P)-binding domain AL543_17785 e6494627a812fbcfa4c0717ed49ceb46 276 Gene3D G3DSA:3.40.50.720 1 274 2.8E-43 T 11-10-2018 AL543_17785 e6494627a812fbcfa4c0717ed49ceb46 276 SUPERFAMILY SSF51735 2 262 1.6E-27 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_15050 cf16c6965e60079435e4ce92ddb639a6 284 Pfam PF01380 SIS domain 124 252 4.4E-25 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL543_15050 cf16c6965e60079435e4ce92ddb639a6 284 SUPERFAMILY SSF53697 93 277 5.87E-40 T 11-10-2018 AL543_15050 cf16c6965e60079435e4ce92ddb639a6 284 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 1.7E-29 T 11-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AL543_15050 cf16c6965e60079435e4ce92ddb639a6 284 Gene3D G3DSA:3.40.50.10490 94 277 8.2E-40 T 11-10-2018 AL543_15050 cf16c6965e60079435e4ce92ddb639a6 284 SUPERFAMILY SSF46689 1 80 1.58E-21 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_15050 cf16c6965e60079435e4ce92ddb639a6 284 Gene3D G3DSA:1.10.10.10 1 79 2.3E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_00320 85a329b465ae7b8168b147a35c4c2360 422 Gene3D G3DSA:3.90.1150.10 289 422 3.8E-53 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL543_00320 85a329b465ae7b8168b147a35c4c2360 422 Gene3D G3DSA:3.40.640.10 1 285 6.8E-99 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL543_00320 85a329b465ae7b8168b147a35c4c2360 422 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 3 420 1.5E-197 T 11-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 AL543_00320 85a329b465ae7b8168b147a35c4c2360 422 PIRSF PIRSF001434 1 422 2.6E-128 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL543_00320 85a329b465ae7b8168b147a35c4c2360 422 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 420 5.2E-139 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL543_00320 85a329b465ae7b8168b147a35c4c2360 422 SUPERFAMILY SSF53383 1 421 1.32E-129 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL543_17190 01cd02452fd87bd6d2f363223501738f 170 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 31 169 1.1E-31 T 11-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AL543_17190 01cd02452fd87bd6d2f363223501738f 170 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 158 169 - T 11-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AL543_17190 01cd02452fd87bd6d2f363223501738f 170 Gene3D G3DSA:2.60.40.200 19 170 3.1E-47 T 11-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AL543_17190 01cd02452fd87bd6d2f363223501738f 170 SUPERFAMILY SSF49329 23 169 1.31E-50 T 11-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AL543_07415 f8fc41b444f5f2be2ffe1359fd937494 458 Gene3D G3DSA:3.40.50.1010 3 155 1.3E-26 T 11-10-2018 AL543_07415 f8fc41b444f5f2be2ffe1359fd937494 458 SMART SM00670 7 141 5.5E-8 T 11-10-2018 IPR002716 PIN domain AL543_07415 f8fc41b444f5f2be2ffe1359fd937494 458 SUPERFAMILY SSF52540 157 437 2.02E-29 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_07415 f8fc41b444f5f2be2ffe1359fd937494 458 Pfam PF13638 PIN domain 9 149 3.0E-34 T 11-10-2018 IPR002716 PIN domain AL543_07415 f8fc41b444f5f2be2ffe1359fd937494 458 Pfam PF02562 PhoH-like protein 248 452 9.5E-54 T 11-10-2018 IPR003714 PhoH-like protein GO:0005524 AL543_07415 f8fc41b444f5f2be2ffe1359fd937494 458 SUPERFAMILY SSF88723 7 157 7.36E-14 T 11-10-2018 IPR029060 PIN-like domain superfamily AL543_07415 f8fc41b444f5f2be2ffe1359fd937494 458 Gene3D G3DSA:3.40.50.300 246 456 5.8E-65 T 11-10-2018 AL543_18290 16021274598c629effd7c0e0ea2f3e78 253 Pfam PF16331 TolA binding protein trimerisation 41 113 2.0E-23 T 11-10-2018 IPR032519 YbgF, trimerisation domain GO:0070206 AL543_18290 16021274598c629effd7c0e0ea2f3e78 253 Pfam PF13432 Tetratricopeptide repeat 147 196 7.1E-6 T 11-10-2018 AL543_18290 16021274598c629effd7c0e0ea2f3e78 253 Pfam PF13174 Tetratricopeptide repeat 210 242 1.0E-6 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL543_18290 16021274598c629effd7c0e0ea2f3e78 253 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 136 251 6.9E-35 T 11-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal AL543_18290 16021274598c629effd7c0e0ea2f3e78 253 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 5 253 17.051 T 11-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 AL543_18290 16021274598c629effd7c0e0ea2f3e78 253 SUPERFAMILY SSF48452 137 247 4.14E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_18290 16021274598c629effd7c0e0ea2f3e78 253 Gene3D G3DSA:1.25.40.10 135 253 8.2E-23 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_18290 16021274598c629effd7c0e0ea2f3e78 253 SMART SM00028 173 206 27.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL543_18290 16021274598c629effd7c0e0ea2f3e78 253 SMART SM00028 209 242 0.057 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL543_18290 16021274598c629effd7c0e0ea2f3e78 253 Gene3D G3DSA:1.20.5.110 37 116 1.4E-21 T 11-10-2018 AL543_14180 c89585b55f0feec7d51c5dcecad5b94c 230 Pfam PF02508 Rnf-Nqr subunit, membrane protein 7 200 1.2E-64 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 AL543_14180 c89585b55f0feec7d51c5dcecad5b94c 230 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 6 208 9.2E-90 T 11-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 AL543_14180 c89585b55f0feec7d51c5dcecad5b94c 230 PIRSF PIRSF006102 1 220 5.2E-77 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 AL543_14180 c89585b55f0feec7d51c5dcecad5b94c 230 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 1 210 28.095 T 11-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 AL543_12860 81edfafcb6552f184c6f01538692f688 548 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 315 538 7.3E-17 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL543_12860 81edfafcb6552f184c6f01538692f688 548 SUPERFAMILY SSF161098 259 529 1.28E-34 T 11-10-2018 IPR035906 MetI-like superfamily AL543_12860 81edfafcb6552f184c6f01538692f688 548 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 279 539 1.3E-76 T 11-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 AL543_12860 81edfafcb6552f184c6f01538692f688 548 Gene3D G3DSA:1.10.3720.10 277 541 5.2E-31 T 11-10-2018 IPR035906 MetI-like superfamily AL543_20480 865cc76bf4005b61b9d0822cfa86079f 378 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 378 2.1E-142 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AL543_20480 865cc76bf4005b61b9d0822cfa86079f 378 PIRSF PIRSF000267 2 377 1.2E-111 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AL543_20480 865cc76bf4005b61b9d0822cfa86079f 378 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 361 3.4E-97 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AL543_01240 5c48f7ce89f3bd04ac88cb5608d5f0ba 263 SUPERFAMILY SSF161098 65 253 6.41E-21 T 11-10-2018 IPR035906 MetI-like superfamily AL543_01240 5c48f7ce89f3bd04ac88cb5608d5f0ba 263 Gene3D G3DSA:1.10.3720.10 61 260 1.7E-18 T 11-10-2018 IPR035906 MetI-like superfamily AL543_01240 5c48f7ce89f3bd04ac88cb5608d5f0ba 263 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 258 3.5E-19 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL543_06790 5a340877f38d4f084585690078cfc13c 260 Pfam PF08478 POTRA domain, FtsQ-type 53 122 9.6E-17 T 11-10-2018 IPR013685 POTRA domain, FtsQ-type AL543_06790 5a340877f38d4f084585690078cfc13c 260 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 22 246 23.187 T 11-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 AL543_06790 5a340877f38d4f084585690078cfc13c 260 Pfam PF03799 Cell division protein FtsQ 126 238 2.4E-25 T 11-10-2018 IPR005548 Cell division protein FtsQ/DivIB AL543_06790 5a340877f38d4f084585690078cfc13c 260 Gene3D G3DSA:3.10.20.310 54 122 1.7E-25 T 11-10-2018 AL543_06790 5a340877f38d4f084585690078cfc13c 260 Gene3D G3DSA:3.40.50.11690 125 251 5.2E-37 T 11-10-2018 AL543_07675 4302975db3e352f96f7c4c04aae45b3d 653 PRINTS PR01607 Apyrase family signature 289 309 1.7E-29 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL543_07675 4302975db3e352f96f7c4c04aae45b3d 653 PRINTS PR01607 Apyrase family signature 249 272 1.7E-29 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL543_07675 4302975db3e352f96f7c4c04aae45b3d 653 PRINTS PR01607 Apyrase family signature 536 555 1.7E-29 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL543_07675 4302975db3e352f96f7c4c04aae45b3d 653 PRINTS PR01607 Apyrase family signature 28 46 1.7E-29 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL543_07675 4302975db3e352f96f7c4c04aae45b3d 653 PRINTS PR01607 Apyrase family signature 221 238 1.7E-29 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL543_07675 4302975db3e352f96f7c4c04aae45b3d 653 PRINTS PR01607 Apyrase family signature 434 457 1.7E-29 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL543_07675 4302975db3e352f96f7c4c04aae45b3d 653 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 29 653 0.0 T 11-10-2018 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 AL543_07675 4302975db3e352f96f7c4c04aae45b3d 653 Gene3D G3DSA:3.60.21.10 23 360 4.4E-136 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like AL543_07675 4302975db3e352f96f7c4c04aae45b3d 653 SUPERFAMILY SSF56300 23 360 8.02E-87 T 11-10-2018 AL543_07675 4302975db3e352f96f7c4c04aae45b3d 653 SUPERFAMILY SSF55816 361 603 5.69E-37 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL543_07675 4302975db3e352f96f7c4c04aae45b3d 653 Gene3D G3DSA:3.90.780.10 410 592 4.3E-49 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL543_07675 4302975db3e352f96f7c4c04aae45b3d 653 Pfam PF00149 Calcineurin-like phosphoesterase 30 265 3.6E-12 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AL543_07675 4302975db3e352f96f7c4c04aae45b3d 653 Pfam PF02872 5'-nucleotidase, C-terminal domain 363 554 1.0E-18 T 11-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL543_07675 4302975db3e352f96f7c4c04aae45b3d 653 ProSitePatterns PS00786 5'-nucleotidase signature 2. 115 126 - T 11-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL543_11845 7a6f27f8436717385bc9ae8173fc6a03 65 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 57 6.2E-30 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 AL543_11845 7a6f27f8436717385bc9ae8173fc6a03 65 Gene3D G3DSA:3.30.70.1680 1 58 1.0E-29 T 11-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 AL543_11845 7a6f27f8436717385bc9ae8173fc6a03 65 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 4.0E-20 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 AL543_11845 7a6f27f8436717385bc9ae8173fc6a03 65 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 63 16.928 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 AL543_11845 7a6f27f8436717385bc9ae8173fc6a03 65 SUPERFAMILY SSF117130 1 54 6.93E-21 T 11-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 AL543_11845 7a6f27f8436717385bc9ae8173fc6a03 65 Pfam PF02599 Global regulator protein family 1 52 2.0E-26 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 AL543_00915 82f4ecd0ad52060d797ef34d1afd0934 193 Pfam PF05068 Mannitol repressor 24 187 4.8E-63 T 11-10-2018 IPR007761 Mannitol repressor MtlR-like AL543_00915 82f4ecd0ad52060d797ef34d1afd0934 193 Gene3D G3DSA:1.20.120.330 16 189 2.0E-70 T 11-10-2018 AL543_00915 82f4ecd0ad52060d797ef34d1afd0934 193 SUPERFAMILY SSF158668 22 188 6.8E-59 T 11-10-2018 IPR038026 MtlR-like superfamily AL543_07835 ace854ca5fb3a798c2678450356c9e2c 100 Pfam PF00276 Ribosomal protein L23 9 95 1.9E-31 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 AL543_07835 ace854ca5fb3a798c2678450356c9e2c 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.356 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 AL543_07835 ace854ca5fb3a798c2678450356c9e2c 100 SUPERFAMILY SSF54189 3 92 8.63E-32 T 11-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_07835 ace854ca5fb3a798c2678450356c9e2c 100 Gene3D G3DSA:3.30.70.330 1 100 4.0E-38 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily AL543_07835 ace854ca5fb3a798c2678450356c9e2c 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 11-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_06625 fbf3b3a7a00de010872a3c3afe8df8bd 426 Gene3D G3DSA:3.40.50.1100 83 392 1.6E-136 T 11-10-2018 AL543_06625 fbf3b3a7a00de010872a3c3afe8df8bd 426 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 95 109 - T 11-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AL543_06625 fbf3b3a7a00de010872a3c3afe8df8bd 426 TIGRFAM TIGR00260 thrC: threonine synthase 51 391 1.7E-113 T 11-10-2018 IPR004450 Threonine synthase-like AL543_06625 fbf3b3a7a00de010872a3c3afe8df8bd 426 Gene3D G3DSA:3.90.1380.10 1 79 8.5E-32 T 11-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily AL543_06625 fbf3b3a7a00de010872a3c3afe8df8bd 426 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 87 367 4.2E-25 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AL543_06625 fbf3b3a7a00de010872a3c3afe8df8bd 426 SUPERFAMILY SSF53686 1 424 1.44E-131 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL543_06625 fbf3b3a7a00de010872a3c3afe8df8bd 426 Pfam PF14821 Threonine synthase N terminus 8 78 6.5E-9 T 11-10-2018 IPR029144 Threonine synthase, N-terminal AL543_06625 fbf3b3a7a00de010872a3c3afe8df8bd 426 Gene3D G3DSA:3.40.50.1100 101 399 1.6E-136 T 11-10-2018 AL543_19425 6d89e791f759aada099f6183e80e44b3 1034 Hamap MF_00970 Ribonuclease E [rne]. 1 1021 35.968 T 11-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 AL543_19425 6d89e791f759aada099f6183e80e44b3 1034 SUPERFAMILY SSF50249 40 124 9.43E-20 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL543_19425 6d89e791f759aada099f6183e80e44b3 1034 Gene3D G3DSA:3.40.1260.20 400 508 2.9E-40 T 11-10-2018 AL543_19425 6d89e791f759aada099f6183e80e44b3 1034 SMART SM00316 37 119 3.9E-11 T 11-10-2018 IPR022967 RNA-binding domain, S1 AL543_19425 6d89e791f759aada099f6183e80e44b3 1034 Pfam PF10150 Ribonuclease E/G family 121 390 4.4E-94 T 11-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 AL543_19425 6d89e791f759aada099f6183e80e44b3 1034 Gene3D G3DSA:2.40.50.140 32 125 4.3E-32 T 11-10-2018 AL543_19425 6d89e791f759aada099f6183e80e44b3 1034 Pfam PF00575 S1 RNA binding domain 37 118 4.6E-14 T 11-10-2018 IPR003029 S1 domain GO:0003676 AL543_19425 6d89e791f759aada099f6183e80e44b3 1034 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 424 7.8E-171 T 11-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 AL543_10700 96f6fb72f99902def69bcb8b56d5963b 122 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 58 122 1.0E-12 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_10700 96f6fb72f99902def69bcb8b56d5963b 122 SUPERFAMILY SSF54736 51 122 2.62E-24 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AL543_10700 96f6fb72f99902def69bcb8b56d5963b 122 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 56 122 3.8E-30 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_10700 96f6fb72f99902def69bcb8b56d5963b 122 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 50 1.7E-17 T 11-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_10700 96f6fb72f99902def69bcb8b56d5963b 122 Gene3D G3DSA:1.20.5.710 2 51 2.8E-24 T 11-10-2018 AL543_10700 96f6fb72f99902def69bcb8b56d5963b 122 Gene3D G3DSA:3.30.1390.10 52 122 1.3E-30 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AL543_10700 96f6fb72f99902def69bcb8b56d5963b 122 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 122 25.108 T 11-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_10700 96f6fb72f99902def69bcb8b56d5963b 122 SUPERFAMILY SSF48300 4 58 4.05E-16 T 11-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_10700 96f6fb72f99902def69bcb8b56d5963b 122 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 122 1.2E-47 T 11-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_15195 caebdad4a6f415a271baf7c907c50348 290 SMART SM00481 3 70 8.4E-15 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal AL543_15195 caebdad4a6f415a271baf7c907c50348 290 SUPERFAMILY SSF89550 1 275 5.36E-53 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AL543_15195 caebdad4a6f415a271baf7c907c50348 290 Gene3D G3DSA:1.10.150.650 98 169 9.5E-81 T 11-10-2018 AL543_15195 caebdad4a6f415a271baf7c907c50348 290 Pfam PF02811 PHP domain 4 173 2.5E-7 T 11-10-2018 IPR004013 PHP domain GO:0003824 AL543_15195 caebdad4a6f415a271baf7c907c50348 290 Gene3D G3DSA:3.20.20.140 3 250 9.5E-81 T 11-10-2018 AL543_08545 10d4f20ef2c94da548e06fe5f20c5ce7 144 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 2 144 5.1E-62 T 11-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 AL543_08545 10d4f20ef2c94da548e06fe5f20c5ce7 144 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 144 33.143 T 11-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 AL543_08545 10d4f20ef2c94da548e06fe5f20c5ce7 144 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 142 2.5E-51 T 11-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 AL543_08545 10d4f20ef2c94da548e06fe5f20c5ce7 144 Gene3D G3DSA:3.50.80.10 1 144 5.0E-53 T 11-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily AL543_08545 10d4f20ef2c94da548e06fe5f20c5ce7 144 SUPERFAMILY SSF69500 2 143 7.32E-53 T 11-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily AL543_14895 ff7137099385fea37c3a3726aa750c8b 142 Pfam PF12680 SnoaL-like domain 9 112 9.2E-15 T 11-10-2018 IPR037401 SnoaL-like domain AL543_14895 ff7137099385fea37c3a3726aa750c8b 142 Gene3D G3DSA:3.10.450.50 7 130 5.3E-23 T 11-10-2018 AL543_14895 ff7137099385fea37c3a3726aa750c8b 142 SUPERFAMILY SSF54427 7 134 2.93E-27 T 11-10-2018 IPR032710 NTF2-like domain superfamily AL543_10570 0861033e27007336cdcabc29aa3e0a08 89 SUPERFAMILY SSF54292 1 87 7.47E-27 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AL543_10570 0861033e27007336cdcabc29aa3e0a08 89 Gene3D G3DSA:3.10.20.30 3 89 7.4E-25 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AL543_10570 0861033e27007336cdcabc29aa3e0a08 89 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AL543_10570 0861033e27007336cdcabc29aa3e0a08 89 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 7 80 9.3E-16 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL543_18425 3d32fd0acc2c2ce47be18b144cfdf984 268 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 198 214 - T 11-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 AL543_18425 3d32fd0acc2c2ce47be18b144cfdf984 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 260 4.8E-20 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL543_18425 3d32fd0acc2c2ce47be18b144cfdf984 268 SUPERFAMILY SSF56219 1 268 9.95E-86 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AL543_18425 3d32fd0acc2c2ce47be18b144cfdf984 268 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 11-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 AL543_18425 3d32fd0acc2c2ce47be18b144cfdf984 268 Gene3D G3DSA:3.60.10.10 1 268 2.3E-80 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AL543_18425 3d32fd0acc2c2ce47be18b144cfdf984 268 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 267 5.9E-100 T 11-10-2018 AL543_18425 3d32fd0acc2c2ce47be18b144cfdf984 268 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 268 1.3E-86 T 11-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 AL543_20555 c28e9f21586feb14111b708d87cb8217 107 Pfam PF00034 Cytochrome c 33 107 1.3E-10 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL543_20555 c28e9f21586feb14111b708d87cb8217 107 SUPERFAMILY SSF46626 9 107 2.15E-22 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL543_20555 c28e9f21586feb14111b708d87cb8217 107 Gene3D G3DSA:1.10.760.10 26 107 1.1E-25 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL543_10290 7ab9c1753be2aebd2eb61ab98f1155b7 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 124 158 2.2E-5 T 11-10-2018 IPR001451 Hexapeptide repeat AL543_10290 7ab9c1753be2aebd2eb61ab98f1155b7 186 SUPERFAMILY SSF51161 67 174 6.52E-26 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AL543_10290 7ab9c1753be2aebd2eb61ab98f1155b7 186 Gene3D G3DSA:2.160.10.10 6 185 1.8E-48 T 11-10-2018 AL543_12865 ea9659367f0d7661d1f31e66c89e78d0 273 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 27 273 4.1E-121 T 11-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 AL543_12865 ea9659367f0d7661d1f31e66c89e78d0 273 Pfam PF00005 ABC transporter 42 198 6.9E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_12865 ea9659367f0d7661d1f31e66c89e78d0 273 Gene3D G3DSA:3.40.50.300 25 270 8.5E-66 T 11-10-2018 AL543_12865 ea9659367f0d7661d1f31e66c89e78d0 273 SUPERFAMILY SSF52540 23 259 7.93E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_12865 ea9659367f0d7661d1f31e66c89e78d0 273 SMART SM00382 51 254 7.3E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_12865 ea9659367f0d7661d1f31e66c89e78d0 273 ProSitePatterns PS00211 ABC transporters family signature. 170 184 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_19800 b7f9dcb953679b12f60341903023b810 73 Pfam PF10981 Protein of unknown function (DUF2788) 18 67 3.6E-19 T 11-10-2018 IPR021249 Protein of unknown function DUF2788 AL543_14875 9fcfc46adbbcb6869737361a4bdc0103 267 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 13 267 32.213 T 11-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 AL543_14875 9fcfc46adbbcb6869737361a4bdc0103 267 Pfam PF08241 Methyltransferase domain 57 149 6.9E-26 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AL543_14875 9fcfc46adbbcb6869737361a4bdc0103 267 Gene3D G3DSA:3.40.50.150 18 193 9.3E-39 T 11-10-2018 AL543_14875 9fcfc46adbbcb6869737361a4bdc0103 267 SUPERFAMILY SSF53335 19 219 1.82E-46 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL543_14875 9fcfc46adbbcb6869737361a4bdc0103 267 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 21 266 4.1E-64 T 11-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 AL543_01860 799289d6cf3c10cabc7b3ccf35a7410f 460 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 128 145 - T 11-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 AL543_01860 799289d6cf3c10cabc7b3ccf35a7410f 460 Pfam PF01547 Bacterial extracellular solute-binding protein 32 318 1.2E-33 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein AL543_01860 799289d6cf3c10cabc7b3ccf35a7410f 460 Gene3D G3DSA:3.40.190.10 129 395 7.1E-59 T 11-10-2018 AL543_01860 799289d6cf3c10cabc7b3ccf35a7410f 460 SUPERFAMILY SSF53850 21 403 1.48E-63 T 11-10-2018 AL543_01860 799289d6cf3c10cabc7b3ccf35a7410f 460 Gene3D G3DSA:3.40.190.10 39 340 7.1E-59 T 11-10-2018 AL543_08000 57d4c740a9b60250024fef7077ac3865 366 PIRSF PIRSF001455 21 365 6.9E-109 T 11-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AL543_08000 57d4c740a9b60250024fef7077ac3865 366 Gene3D G3DSA:3.40.50.1970 5 176 8.2E-68 T 11-10-2018 AL543_08000 57d4c740a9b60250024fef7077ac3865 366 Gene3D G3DSA:1.20.1090.10 177 366 3.0E-73 T 11-10-2018 AL543_08000 57d4c740a9b60250024fef7077ac3865 366 Pfam PF01761 3-dehydroquinate synthase 72 329 4.2E-114 T 11-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AL543_08000 57d4c740a9b60250024fef7077ac3865 366 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 6 360 73.546 T 11-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AL543_08000 57d4c740a9b60250024fef7077ac3865 366 SUPERFAMILY SSF56796 9 361 3.27E-120 T 11-10-2018 AL543_08000 57d4c740a9b60250024fef7077ac3865 366 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 18 358 5.2E-123 T 11-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AL543_01575 ef9ed8b1260632fb80a37ec2804202ba 82 Gene3D G3DSA:1.20.5.190 26 81 2.2E-12 T 11-10-2018 AL543_01575 ef9ed8b1260632fb80a37ec2804202ba 82 PIRSF PIRSF002855 1 82 1.5E-35 T 11-10-2018 IPR016367 Murein-lipoprotein AL543_01575 ef9ed8b1260632fb80a37ec2804202ba 82 Pfam PF04728 Lipoprotein leucine-zipper 30 82 2.7E-23 T 11-10-2018 IPR006817 Lipoprotein leucine-zipper GO:0019867 AL543_01575 ef9ed8b1260632fb80a37ec2804202ba 82 SUPERFAMILY SSF58042 27 81 2.35E-16 T 11-10-2018 AL543_11225 7de1537fa7c1aa2304fa73cc2d5110be 296 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 273 3.4E-83 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 AL543_11225 7de1537fa7c1aa2304fa73cc2d5110be 296 Gene3D G3DSA:2.40.10.340 122 266 3.3E-35 T 11-10-2018 AL543_11225 7de1537fa7c1aa2304fa73cc2d5110be 296 Gene3D G3DSA:2.40.10.350 180 257 3.3E-35 T 11-10-2018 AL543_11225 7de1537fa7c1aa2304fa73cc2d5110be 296 Pfam PF04085 rod shape-determining protein MreC 123 269 3.2E-39 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 AL543_11225 7de1537fa7c1aa2304fa73cc2d5110be 296 PIRSF PIRSF038471 2 283 1.9E-78 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 AL543_18635 ea2e2d25e54116e2845abdab87cff615 279 SUPERFAMILY SSF48008 79 270 3.4E-56 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL543_18635 ea2e2d25e54116e2845abdab87cff615 279 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 276 3.9E-118 T 11-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 AL543_18635 ea2e2d25e54116e2845abdab87cff615 279 Gene3D G3DSA:1.20.120.530 80 148 2.1E-6 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL543_18635 ea2e2d25e54116e2845abdab87cff615 279 Gene3D G3DSA:1.20.120.530 149 278 5.8E-26 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL543_18635 ea2e2d25e54116e2845abdab87cff615 279 Gene3D G3DSA:1.10.10.10 1 79 1.3E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_18635 ea2e2d25e54116e2845abdab87cff615 279 SMART SM00345 12 71 1.6E-22 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL543_18635 ea2e2d25e54116e2845abdab87cff615 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 3.5E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL543_18635 ea2e2d25e54116e2845abdab87cff615 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 3.5E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL543_18635 ea2e2d25e54116e2845abdab87cff615 279 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 279 139.369 T 11-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 AL543_18635 ea2e2d25e54116e2845abdab87cff615 279 SUPERFAMILY SSF46785 12 74 7.76E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_18635 ea2e2d25e54116e2845abdab87cff615 279 Pfam PF07840 FadR C-terminal domain 72 274 2.2E-68 T 11-10-2018 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 AL543_18635 ea2e2d25e54116e2845abdab87cff615 279 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 71 3.1E-20 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL543_05955 c39a14768954275b7ae35507e767faa8 414 Pfam PF13520 Amino acid permease 14 366 3.5E-28 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AL543_05955 c39a14768954275b7ae35507e767faa8 414 PIRSF PIRSF006060 1 412 1.3E-55 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AL543_05955 c39a14768954275b7ae35507e767faa8 414 Gene3D G3DSA:1.20.1740.10 2 410 2.0E-56 T 11-10-2018 AL543_01755 d8556b3135454c4a353917e2aca41142 363 Gene3D G3DSA:3.20.20.70 1 362 1.5E-139 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_01755 d8556b3135454c4a353917e2aca41142 363 SUPERFAMILY SSF51395 1 361 3.97E-125 T 11-10-2018 AL543_01755 d8556b3135454c4a353917e2aca41142 363 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 340 2.0E-99 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AL543_04260 85e366d3fd7c1cd4b5c22bda46eb6ad4 196 SUPERFAMILY SSF110997 104 167 1.28E-7 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AL543_04260 85e366d3fd7c1cd4b5c22bda46eb6ad4 196 Pfam PF05036 Sporulation related domain 105 178 5.6E-13 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 AL543_04260 85e366d3fd7c1cd4b5c22bda46eb6ad4 196 Gene3D G3DSA:3.30.70.1070 92 187 6.3E-22 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AL543_17350 a9091de7de477b6fc309b58a2332e828 405 Gene3D G3DSA:1.20.1250.20 6 387 1.6E-44 T 11-10-2018 AL543_17350 a9091de7de477b6fc309b58a2332e828 405 Pfam PF07690 Major Facilitator Superfamily 16 352 2.7E-41 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL543_17350 a9091de7de477b6fc309b58a2332e828 405 SUPERFAMILY SSF103473 6 393 7.06E-55 T 11-10-2018 IPR036259 MFS transporter superfamily AL543_10245 d7faf4b76f4898232d07da4979037a8e 247 PIRSF PIRSF028162 1 246 1.8E-102 T 11-10-2018 IPR016873 Capsular polysaccharide biosynthesis protein, BcbE, predicted AL543_10245 d7faf4b76f4898232d07da4979037a8e 247 SUPERFAMILY SSF53448 2 239 4.35E-21 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL543_10245 d7faf4b76f4898232d07da4979037a8e 247 Gene3D G3DSA:3.90.550.10 1 246 2.2E-64 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL543_19530 32f9410e7d4162332c2f8699828b2180 306 Pfam PF00850 Histone deacetylase domain 42 288 8.3E-48 T 11-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AL543_19530 32f9410e7d4162332c2f8699828b2180 306 PRINTS PR01270 Histone deacetylase superfamily signature 122 145 3.2E-16 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AL543_19530 32f9410e7d4162332c2f8699828b2180 306 PRINTS PR01270 Histone deacetylase superfamily signature 230 240 3.2E-16 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AL543_19530 32f9410e7d4162332c2f8699828b2180 306 PRINTS PR01270 Histone deacetylase superfamily signature 156 171 3.2E-16 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AL543_19530 32f9410e7d4162332c2f8699828b2180 306 Gene3D G3DSA:3.40.800.20 2 305 9.9E-61 T 11-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AL543_19530 32f9410e7d4162332c2f8699828b2180 306 SUPERFAMILY SSF52768 3 290 1.2E-76 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily AL543_15140 828cd0d9a541a6bdd9aca868140ead09 289 SUPERFAMILY SSF117396 4 266 1.23E-74 T 11-10-2018 IPR036520 UPF0759 superfamily AL543_15140 828cd0d9a541a6bdd9aca868140ead09 289 Gene3D G3DSA:3.20.20.410 3 269 1.9E-45 T 11-10-2018 IPR036520 UPF0759 superfamily AL543_15140 828cd0d9a541a6bdd9aca868140ead09 289 Pfam PF01904 Protein of unknown function DUF72 24 263 6.4E-56 T 11-10-2018 IPR002763 Protein of unknown function DUF72 AL543_13245 59a7a258caca43792913bb3ebd652d1f 599 SUPERFAMILY SSF51569 6 303 9.16E-94 T 11-10-2018 AL543_13245 59a7a258caca43792913bb3ebd652d1f 599 Pfam PF00364 Biotin-requiring enzyme 539 598 1.7E-18 T 11-10-2018 IPR000089 Biotin/lipoyl attachment AL543_13245 59a7a258caca43792913bb3ebd652d1f 599 Gene3D G3DSA:2.40.50.100 533 599 3.4E-25 T 11-10-2018 AL543_13245 59a7a258caca43792913bb3ebd652d1f 599 SUPERFAMILY SSF51230 525 598 2.49E-21 T 11-10-2018 IPR011053 Single hybrid motif AL543_13245 59a7a258caca43792913bb3ebd652d1f 599 Pfam PF02436 Conserved carboxylase domain 295 502 4.4E-53 T 11-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 AL543_13245 59a7a258caca43792913bb3ebd652d1f 599 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 10 595 9.6E-281 T 11-10-2018 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 AL543_13245 59a7a258caca43792913bb3ebd652d1f 599 SUPERFAMILY SSF89000 300 464 7.06E-46 T 11-10-2018 AL543_13245 59a7a258caca43792913bb3ebd652d1f 599 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 555 572 - T 11-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AL543_13245 59a7a258caca43792913bb3ebd652d1f 599 Gene3D G3DSA:3.20.20.70 1 467 1.6E-173 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_13245 59a7a258caca43792913bb3ebd652d1f 599 Pfam PF00682 HMGL-like 8 273 3.5E-65 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AL543_17765 77c6397c40a229b865db31d5dc69aefe 60 Pfam PF06796 Periplasmic nitrate reductase protein NapE 5 55 4.0E-26 T 11-10-2018 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE AL543_17765 77c6397c40a229b865db31d5dc69aefe 60 TIGRFAM TIGR02972 TMAO_torE: trimethylamine N-oxide reductase system, TorE protein 8 57 1.2E-30 T 11-10-2018 IPR014316 Trimethylamine N-oxide reductase system, TorE AL543_16880 a8c3098dcc778146e4b6666ee25f4388 620 SUPERFAMILY SSF58104 311 620 1.44E-66 T 11-10-2018 AL543_16880 a8c3098dcc778146e4b6666ee25f4388 620 SMART SM00304 289 343 7.0E-9 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_16880 a8c3098dcc778146e4b6666ee25f4388 620 Pfam PF00672 HAMP domain 289 339 2.4E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_16880 a8c3098dcc778146e4b6666ee25f4388 620 Gene3D G3DSA:1.10.287.950 289 620 1.9E-62 T 11-10-2018 AL543_16880 a8c3098dcc778146e4b6666ee25f4388 620 SMART SM00283 358 619 2.8E-59 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_16880 a8c3098dcc778146e4b6666ee25f4388 620 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 430 586 7.3E-36 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_12495 61f5730531b4d9740ae762d0699a8247 271 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 AL543_12495 61f5730531b4d9740ae762d0699a8247 271 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 257 1.3E-83 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 AL543_12495 61f5730531b4d9740ae762d0699a8247 271 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 262 20.311 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 AL543_12495 61f5730531b4d9740ae762d0699a8247 271 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 3 261 1.9E-92 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 AL543_14765 e536281619ef88046616f466bcc4009e 543 Gene3D G3DSA:3.40.190.10 42 524 1.6E-198 T 11-10-2018 AL543_14765 e536281619ef88046616f466bcc4009e 543 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 87 109 - T 11-10-2018 IPR023765 Solute-binding protein family 5, conserved site AL543_14765 e536281619ef88046616f466bcc4009e 543 Gene3D G3DSA:3.10.105.10 297 512 1.6E-198 T 11-10-2018 AL543_14765 e536281619ef88046616f466bcc4009e 543 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 463 2.2E-97 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain AL543_14765 e536281619ef88046616f466bcc4009e 543 Gene3D G3DSA:3.90.76.10 72 195 1.6E-198 T 11-10-2018 AL543_14765 e536281619ef88046616f466bcc4009e 543 PIRSF PIRSF002741 1 543 4.6E-125 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL543_14765 e536281619ef88046616f466bcc4009e 543 SUPERFAMILY SSF53850 40 530 7.78E-154 T 11-10-2018 AL543_17655 6d482c2dc9b8bb30838b8863de5141d6 396 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 199 213 - T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL543_17655 6d482c2dc9b8bb30838b8863de5141d6 396 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 388 4.2E-115 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL543_17655 6d482c2dc9b8bb30838b8863de5141d6 396 Gene3D G3DSA:3.40.640.10 3 255 1.4E-76 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL543_17655 6d482c2dc9b8bb30838b8863de5141d6 396 PIRSF PIRSF001434 1 391 1.6E-122 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL543_17655 6d482c2dc9b8bb30838b8863de5141d6 396 Gene3D G3DSA:3.90.1150.10 256 390 3.9E-39 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL543_17655 6d482c2dc9b8bb30838b8863de5141d6 396 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 7 389 8.2E-172 T 11-10-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 AL543_17655 6d482c2dc9b8bb30838b8863de5141d6 396 SUPERFAMILY SSF53383 21 388 2.26E-99 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL543_05810 da4b17d150ba38326fe8744aa63f40e9 661 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 102 371 2.2E-52 T 11-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 AL543_05810 da4b17d150ba38326fe8744aa63f40e9 661 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 28 660 42.683 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AL543_05810 da4b17d150ba38326fe8744aa63f40e9 661 Gene3D G3DSA:3.20.20.10 92 376 3.9E-239 T 11-10-2018 IPR029066 PLP-binding barrel AL543_05810 da4b17d150ba38326fe8744aa63f40e9 661 TIGRFAM TIGR01273 speA: arginine decarboxylase 32 659 2.0E-279 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AL543_05810 da4b17d150ba38326fe8744aa63f40e9 661 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 267 280 5.5E-13 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL543_05810 da4b17d150ba38326fe8744aa63f40e9 661 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 123 141 5.5E-13 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL543_05810 da4b17d150ba38326fe8744aa63f40e9 661 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 570 583 5.5E-13 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL543_05810 da4b17d150ba38326fe8744aa63f40e9 661 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 361 380 5.5E-13 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL543_05810 da4b17d150ba38326fe8744aa63f40e9 661 Gene3D G3DSA:1.20.58.930 393 488 3.9E-239 T 11-10-2018 AL543_05810 da4b17d150ba38326fe8744aa63f40e9 661 PIRSF PIRSF001336 19 661 1.6E-252 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AL543_05810 da4b17d150ba38326fe8744aa63f40e9 661 SUPERFAMILY SSF51419 91 373 1.87E-65 T 11-10-2018 IPR029066 PLP-binding barrel AL543_05810 da4b17d150ba38326fe8744aa63f40e9 661 PRINTS PR01180 Arginine decarboxylase signature 517 542 3.9E-65 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AL543_05810 da4b17d150ba38326fe8744aa63f40e9 661 PRINTS PR01180 Arginine decarboxylase signature 174 189 3.9E-65 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AL543_05810 da4b17d150ba38326fe8744aa63f40e9 661 PRINTS PR01180 Arginine decarboxylase signature 351 368 3.9E-65 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AL543_05810 da4b17d150ba38326fe8744aa63f40e9 661 PRINTS PR01180 Arginine decarboxylase signature 91 106 3.9E-65 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AL543_05810 da4b17d150ba38326fe8744aa63f40e9 661 PRINTS PR01180 Arginine decarboxylase signature 492 513 3.9E-65 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AL543_05810 da4b17d150ba38326fe8744aa63f40e9 661 PRINTS PR01180 Arginine decarboxylase signature 115 129 3.9E-65 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AL543_05810 da4b17d150ba38326fe8744aa63f40e9 661 PRINTS PR01180 Arginine decarboxylase signature 224 246 3.9E-65 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AL543_05810 da4b17d150ba38326fe8744aa63f40e9 661 PRINTS PR01180 Arginine decarboxylase signature 570 591 3.9E-65 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AL543_05810 da4b17d150ba38326fe8744aa63f40e9 661 PRINTS PR01180 Arginine decarboxylase signature 200 221 3.9E-65 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AL543_05810 da4b17d150ba38326fe8744aa63f40e9 661 Gene3D G3DSA:2.40.37.10 39 597 3.9E-239 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AL543_05775 ea02000b94d1b483df3a045155c8c798 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL543_05775 ea02000b94d1b483df3a045155c8c798 253 SUPERFAMILY SSF51735 6 252 1.22E-77 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_05775 ea02000b94d1b483df3a045155c8c798 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 250 1.3E-58 T 11-10-2018 AL543_05775 ea02000b94d1b483df3a045155c8c798 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 3.7E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_05775 ea02000b94d1b483df3a045155c8c798 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 3.7E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_05775 ea02000b94d1b483df3a045155c8c798 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 3.7E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_05775 ea02000b94d1b483df3a045155c8c798 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 1.4E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_05775 ea02000b94d1b483df3a045155c8c798 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.4E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_05775 ea02000b94d1b483df3a045155c8c798 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.4E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_05775 ea02000b94d1b483df3a045155c8c798 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.4E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_05775 ea02000b94d1b483df3a045155c8c798 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 1.4E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_05775 ea02000b94d1b483df3a045155c8c798 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.4E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_05775 ea02000b94d1b483df3a045155c8c798 253 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 6 253 2.2E-131 T 11-10-2018 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.127|MetaCyc: PWY-6507|MetaCyc: PWY-7562 AL543_05775 ea02000b94d1b483df3a045155c8c798 253 Gene3D G3DSA:3.40.50.720 1 253 9.5E-82 T 11-10-2018 AL543_12630 ff2082390bc755ba9a82c3bde151b4ce 174 SUPERFAMILY SSF52972 1 171 3.84E-63 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AL543_12630 ff2082390bc755ba9a82c3bde151b4ce 174 Gene3D G3DSA:3.90.950.10 1 173 1.4E-74 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AL543_12630 ff2082390bc755ba9a82c3bde151b4ce 174 Hamap MF_00648 Non-canonical purine NTP phosphatase. 2 171 31.083 T 11-10-2018 IPR002786 Non-canonical purine NTP phosphatase AL543_12630 ff2082390bc755ba9a82c3bde151b4ce 174 Pfam PF01931 Protein of unknown function DUF84 7 166 4.3E-58 T 11-10-2018 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 AL543_12630 ff2082390bc755ba9a82c3bde151b4ce 174 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 6 171 1.5E-49 T 11-10-2018 IPR002786 Non-canonical purine NTP phosphatase AL543_02510 5cce39db8d4f8418ccad9586ee9dbf04 344 Pfam PF00589 Phage integrase family 179 326 1.3E-16 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL543_02510 5cce39db8d4f8418ccad9586ee9dbf04 344 Gene3D G3DSA:1.10.443.10 174 344 2.7E-41 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AL543_02510 5cce39db8d4f8418ccad9586ee9dbf04 344 SUPERFAMILY SSF56349 64 334 4.41E-39 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL543_04470 be6360e0794a081fdfc8a9fba7abdb78 410 SUPERFAMILY SSF103473 9 398 4.32E-57 T 11-10-2018 IPR036259 MFS transporter superfamily AL543_04470 be6360e0794a081fdfc8a9fba7abdb78 410 Gene3D G3DSA:1.20.1250.20 3 401 6.9E-58 T 11-10-2018 AL543_04470 be6360e0794a081fdfc8a9fba7abdb78 410 Pfam PF07690 Major Facilitator Superfamily 15 295 2.1E-30 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL543_18225 5476f5b4fefc35ccbce9f5e652667e91 818 Gene3D G3DSA:1.20.1050.60 394 502 5.6E-216 T 11-10-2018 AL543_18225 5476f5b4fefc35ccbce9f5e652667e91 818 Gene3D G3DSA:1.20.1610.10 503 681 5.6E-216 T 11-10-2018 AL543_18225 5476f5b4fefc35ccbce9f5e652667e91 818 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 22 806 1.4E-166 T 11-10-2018 IPR005887 Alpha-1,2-mannosidase, putative AL543_18225 5476f5b4fefc35ccbce9f5e652667e91 818 SUPERFAMILY SSF48208 305 791 3.23E-20 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AL543_18225 5476f5b4fefc35ccbce9f5e652667e91 818 Pfam PF07971 Glycosyl hydrolase family 92 272 805 5.3E-142 T 11-10-2018 IPR012939 Glycosyl hydrolase family 92 AL543_18225 5476f5b4fefc35ccbce9f5e652667e91 818 Gene3D G3DSA:3.30.2080.10 328 807 5.6E-216 T 11-10-2018 AL543_18225 5476f5b4fefc35ccbce9f5e652667e91 818 Gene3D G3DSA:2.70.98.10 37 393 5.6E-216 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AL543_18495 564615efe0f1547676a9aa132ab29b21 511 Pfam PF04293 SpoVR like protein 24 453 7.1E-177 T 11-10-2018 IPR007390 Sporulation stage V, protein R AL543_01300 cedccda22934e4b8e4d5c247eb9ec5d6 343 PIRSF PIRSF019574 1 343 8.9E-106 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL543_01300 cedccda22934e4b8e4d5c247eb9ec5d6 343 Gene3D G3DSA:3.40.190.10 129 337 1.3E-107 T 11-10-2018 AL543_01300 cedccda22934e4b8e4d5c247eb9ec5d6 343 Pfam PF13416 Bacterial extracellular solute-binding protein 39 308 2.1E-37 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein AL543_01300 cedccda22934e4b8e4d5c247eb9ec5d6 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 119 135 7.3E-63 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL543_01300 cedccda22934e4b8e4d5c247eb9ec5d6 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 162 181 7.3E-63 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL543_01300 cedccda22934e4b8e4d5c247eb9ec5d6 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 72 86 7.3E-63 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL543_01300 cedccda22934e4b8e4d5c247eb9ec5d6 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 199 218 7.3E-63 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL543_01300 cedccda22934e4b8e4d5c247eb9ec5d6 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 28 44 7.3E-63 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL543_01300 cedccda22934e4b8e4d5c247eb9ec5d6 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 44 65 7.3E-63 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL543_01300 cedccda22934e4b8e4d5c247eb9ec5d6 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 144 158 7.3E-63 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL543_01300 cedccda22934e4b8e4d5c247eb9ec5d6 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 243 262 7.3E-63 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL543_01300 cedccda22934e4b8e4d5c247eb9ec5d6 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 288 314 7.3E-63 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL543_01300 cedccda22934e4b8e4d5c247eb9ec5d6 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 88 101 7.3E-63 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL543_01300 cedccda22934e4b8e4d5c247eb9ec5d6 343 Gene3D G3DSA:3.40.190.10 26 307 1.3E-107 T 11-10-2018 AL543_01300 cedccda22934e4b8e4d5c247eb9ec5d6 343 SUPERFAMILY SSF53850 22 340 2.85E-89 T 11-10-2018 AL543_10885 3a208bc3840ed48e7f59e80b5ad65226 131 Pfam PF02635 DsrE/DsrF-like family 6 131 1.5E-26 T 11-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein AL543_10885 3a208bc3840ed48e7f59e80b5ad65226 131 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 5 131 2.6E-53 T 11-10-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 AL543_10885 3a208bc3840ed48e7f59e80b5ad65226 131 SUPERFAMILY SSF75169 6 131 2.94E-35 T 11-10-2018 IPR027396 DsrEFH-like AL543_10885 3a208bc3840ed48e7f59e80b5ad65226 131 Gene3D G3DSA:3.40.1260.10 1 131 1.3E-52 T 11-10-2018 IPR027396 DsrEFH-like AL543_18800 a4c1425e19ac1852434051d96acfab1e 370 SUPERFAMILY SSF53756 66 354 2.88E-20 T 11-10-2018 AL543_18800 a4c1425e19ac1852434051d96acfab1e 370 Pfam PF13692 Glycosyl transferases group 1 213 338 4.2E-9 T 11-10-2018 AL543_18800 a4c1425e19ac1852434051d96acfab1e 370 Gene3D G3DSA:3.40.50.2000 199 346 9.2E-35 T 11-10-2018 AL543_20180 9e4b942fdb977489ee40d65ab292ba6f 196 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 112 122 - T 11-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 AL543_20180 9e4b942fdb977489ee40d65ab292ba6f 196 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 5 184 35.895 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AL543_20180 9e4b942fdb977489ee40d65ab292ba6f 196 Pfam PF01195 Peptidyl-tRNA hydrolase 7 190 1.2E-52 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AL543_20180 9e4b942fdb977489ee40d65ab292ba6f 196 Gene3D G3DSA:3.40.50.1470 1 196 5.8E-76 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 AL543_20180 9e4b942fdb977489ee40d65ab292ba6f 196 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 18 31 - T 11-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 AL543_20180 9e4b942fdb977489ee40d65ab292ba6f 196 SUPERFAMILY SSF53178 5 194 1.96E-68 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 AL543_20180 9e4b942fdb977489ee40d65ab292ba6f 196 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 191 1.9E-68 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AL543_01725 aa745f82292fa497dbaf3354d2ba6983 239 Pfam PF03591 AzlC protein 27 164 3.2E-35 T 11-10-2018 IPR011606 Branched-chain amino acid transport, permease AL543_18235 56bfa948579f5ed83eed21f3664bbbb6 461 SUPERFAMILY SSF46785 2 70 5.55E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_18235 56bfa948579f5ed83eed21f3664bbbb6 461 SMART SM00345 7 66 2.6E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL543_18235 56bfa948579f5ed83eed21f3664bbbb6 461 Pfam PF00155 Aminotransferase class I and II 125 446 2.2E-34 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL543_18235 56bfa948579f5ed83eed21f3664bbbb6 461 Gene3D G3DSA:3.90.1150.10 110 456 1.3E-73 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL543_18235 56bfa948579f5ed83eed21f3664bbbb6 461 SUPERFAMILY SSF53383 97 453 4.73E-75 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL543_18235 56bfa948579f5ed83eed21f3664bbbb6 461 Gene3D G3DSA:1.10.10.10 1 68 1.1E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_18235 56bfa948579f5ed83eed21f3664bbbb6 461 Gene3D G3DSA:3.40.640.10 134 352 1.3E-73 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL543_18235 56bfa948579f5ed83eed21f3664bbbb6 461 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 1.0E-10 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL543_18365 5d221da0af082c0a035553f0b99acc27 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 11-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 AL543_18365 5d221da0af082c0a035553f0b99acc27 164 PIRSF PIRSF001467 1 164 6.6E-28 T 11-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 AL543_18365 5d221da0af082c0a035553f0b99acc27 164 Gene3D G3DSA:2.40.100.10 1 164 3.7E-64 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily AL543_18365 5d221da0af082c0a035553f0b99acc27 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 161 9.7E-48 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AL543_18365 5d221da0af082c0a035553f0b99acc27 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 4.8E-11 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AL543_18365 5d221da0af082c0a035553f0b99acc27 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 4.8E-11 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AL543_18365 5d221da0af082c0a035553f0b99acc27 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 4.8E-11 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AL543_18365 5d221da0af082c0a035553f0b99acc27 164 SUPERFAMILY SSF50891 1 162 3.36E-58 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily AL543_17585 bc0be899a705879844b8c90d6eec9115 417 Pfam PF03222 Tryptophan/tyrosine permease family 30 385 1.2E-12 T 11-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 AL543_08125 0395815bc4c56e0f40bffbfbdf26b020 252 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AL543_08125 0395815bc4c56e0f40bffbfbdf26b020 252 SUPERFAMILY SSF46548 107 226 1.5E-30 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL543_08125 0395815bc4c56e0f40bffbfbdf26b020 252 SUPERFAMILY SSF54292 5 106 4.06E-29 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AL543_08125 0395815bc4c56e0f40bffbfbdf26b020 252 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 9 111 2.7E-33 T 11-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL543_08125 0395815bc4c56e0f40bffbfbdf26b020 252 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 229 1.8E-94 T 11-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL543_08125 0395815bc4c56e0f40bffbfbdf26b020 252 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL543_08125 0395815bc4c56e0f40bffbfbdf26b020 252 Pfam PF13183 4Fe-4S dicluster domain 147 219 5.0E-11 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL543_08125 0395815bc4c56e0f40bffbfbdf26b020 252 Gene3D G3DSA:1.10.1060.10 107 244 4.2E-50 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL543_08125 0395815bc4c56e0f40bffbfbdf26b020 252 Gene3D G3DSA:3.10.20.30 1 106 4.6E-35 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AL543_16035 bde236b6eeaba89730c09c28c42aa923 308 Gene3D G3DSA:3.20.20.60 8 308 4.9E-99 T 11-10-2018 AL543_16035 bde236b6eeaba89730c09c28c42aa923 308 ProSitePatterns PS00161 Isocitrate lyase signature. 129 134 - T 11-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 AL543_16035 bde236b6eeaba89730c09c28c42aa923 308 Pfam PF13714 Phosphoenolpyruvate phosphomutase 26 269 1.9E-44 T 11-10-2018 AL543_16035 bde236b6eeaba89730c09c28c42aa923 308 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 13 306 50.141 T 11-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 AL543_16035 bde236b6eeaba89730c09c28c42aa923 308 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 16 305 3.5E-127 T 11-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 AL543_16035 bde236b6eeaba89730c09c28c42aa923 308 SUPERFAMILY SSF51621 7 304 3.36E-98 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AL543_09180 0f1bcf03f07e3e7920cf54b377ecf958 107 Hamap MF_01088 Universal stress protein B [uspB]. 1 107 35.223 T 11-10-2018 IPR019598 Universal stress protein B AL543_09180 0f1bcf03f07e3e7920cf54b377ecf958 107 Pfam PF10625 Universal stress protein B (UspB) 1 107 1.5E-51 T 11-10-2018 IPR019598 Universal stress protein B AL543_01370 ebe71c3b810627c65c91ee1d55f8da44 726 Pfam PF02446 4-alpha-glucanotransferase 177 699 5.9E-126 T 11-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 AL543_01370 ebe71c3b810627c65c91ee1d55f8da44 726 Gene3D G3DSA:3.20.20.80 173 717 6.1E-120 T 11-10-2018 AL543_01370 ebe71c3b810627c65c91ee1d55f8da44 726 SUPERFAMILY SSF51445 160 718 9.66E-150 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AL543_01370 ebe71c3b810627c65c91ee1d55f8da44 726 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 127 715 2.1E-195 T 11-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 AL543_10255 63f096799fd251ec6cf8c7865eaf0e52 126 Gene3D G3DSA:3.40.50.1000 1 126 2.2E-44 T 11-10-2018 IPR023214 HAD superfamily AL543_10255 63f096799fd251ec6cf8c7865eaf0e52 126 TIGRFAM TIGR01689 EcbF-BcbF: capsule biosynthesis phosphatase 1 126 1.2E-68 T 11-10-2018 IPR010039 Capsule biosynthesis phosphatase AL543_10255 63f096799fd251ec6cf8c7865eaf0e52 126 Pfam PF08282 haloacid dehalogenase-like hydrolase 4 70 4.3E-6 T 11-10-2018 AL543_10255 63f096799fd251ec6cf8c7865eaf0e52 126 SUPERFAMILY SSF56784 1 108 3.76E-26 T 11-10-2018 IPR036412 HAD-like superfamily AL543_10255 63f096799fd251ec6cf8c7865eaf0e52 126 TIGRFAM TIGR01681 HAD-SF-IIIC: HAD phosphatase, family IIIC 4 108 1.7E-9 T 11-10-2018 IPR010033 HAD-superfamily phosphatase, subfamily IIIC AL543_18480 540dda03cc920ff803881a7917f09a48 166 Hamap MF_00762 UPF0304 protein YfbU [yfbU]. 1 166 37.561 T 11-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU AL543_18480 540dda03cc920ff803881a7917f09a48 166 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 166 5.0E-92 T 11-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU AL543_18480 540dda03cc920ff803881a7917f09a48 166 Gene3D G3DSA:1.10.3190.10 54 166 2.1E-37 T 11-10-2018 IPR023146 YfbU, alpha-helical bundle domain superfamily AL543_18480 540dda03cc920ff803881a7917f09a48 166 Gene3D G3DSA:1.10.287.680 1 53 1.0E-33 T 11-10-2018 IPR023145 YfbU, helix-hairpin domain superfamily AL543_18480 540dda03cc920ff803881a7917f09a48 166 PIRSF PIRSF006272 1 166 3.7E-81 T 11-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU AL543_18480 540dda03cc920ff803881a7917f09a48 166 Pfam PF03887 YfbU domain 1 166 3.0E-70 T 11-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU AL543_18480 540dda03cc920ff803881a7917f09a48 166 SUPERFAMILY SSF116960 1 166 1.7E-63 T 11-10-2018 AL543_16170 65b6cea724adf3b9ded2c3f43d0f2fde 273 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 262 5.1E-68 T 11-10-2018 AL543_16170 65b6cea724adf3b9ded2c3f43d0f2fde 273 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 235 5.2E-27 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AL543_16170 65b6cea724adf3b9ded2c3f43d0f2fde 273 ProSitePatterns PS01229 Hypothetical cof family signature 2. 216 238 - T 11-10-2018 AL543_16170 65b6cea724adf3b9ded2c3f43d0f2fde 273 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 262 4.7E-64 T 11-10-2018 IPR000150 Cof family GO:0016787 AL543_16170 65b6cea724adf3b9ded2c3f43d0f2fde 273 Gene3D G3DSA:3.40.50.1000 3 263 3.9E-83 T 11-10-2018 IPR023214 HAD superfamily AL543_16170 65b6cea724adf3b9ded2c3f43d0f2fde 273 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 11-10-2018 AL543_16170 65b6cea724adf3b9ded2c3f43d0f2fde 273 SUPERFAMILY SSF56784 1 266 5.65E-77 T 11-10-2018 IPR036412 HAD-like superfamily AL543_16170 65b6cea724adf3b9ded2c3f43d0f2fde 273 Gene3D G3DSA:3.30.1240.10 86 191 3.9E-83 T 11-10-2018 AL543_03940 dd11bf6220a46f88d7562fcb50a00314 96 SUPERFAMILY SSF54909 2 80 2.57E-24 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AL543_03940 dd11bf6220a46f88d7562fcb50a00314 96 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 9.6E-19 T 11-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AL543_03940 dd11bf6220a46f88d7562fcb50a00314 96 Gene3D G3DSA:3.30.70.100 1 93 8.8E-26 T 11-10-2018 AL543_11830 ba964f228db32316725dd0723cd3321e 152 Pfam PF02631 RecX family 30 147 8.3E-31 T 11-10-2018 IPR003783 Regulatory protein RecX GO:0006282 AL543_11830 ba964f228db32316725dd0723cd3321e 152 Hamap MF_01114 Regulatory protein RecX [recX]. 2 152 14.393 T 11-10-2018 IPR003783 Regulatory protein RecX GO:0006282 AL543_11830 ba964f228db32316725dd0723cd3321e 152 Gene3D G3DSA:1.10.10.10 55 97 1.4E-11 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_11830 ba964f228db32316725dd0723cd3321e 152 Gene3D G3DSA:1.10.10.10 7 52 3.4E-11 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_11830 ba964f228db32316725dd0723cd3321e 152 Gene3D G3DSA:1.10.10.10 100 148 4.7E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_09415 32031e205b6d130527d86e752267a322 174 SUPERFAMILY SSF52218 2 171 1.41E-30 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL543_09415 32031e205b6d130527d86e752267a322 174 Pfam PF12724 Flavodoxin domain 4 152 3.6E-49 T 11-10-2018 IPR026816 Flavodoxin domain AL543_09415 32031e205b6d130527d86e752267a322 174 Gene3D G3DSA:3.40.50.360 1 115 1.3E-11 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL543_02925 f0d0427800f615df15908030d74d92a8 168 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 152 1.3E-36 T 11-10-2018 IPR002178 PTS EIIA type-2 domain AL543_02925 f0d0427800f615df15908030d74d92a8 168 Gene3D G3DSA:3.40.930.10 1 164 6.7E-50 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AL543_02925 f0d0427800f615df15908030d74d92a8 168 SUPERFAMILY SSF55804 5 152 3.01E-33 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AL543_02925 f0d0427800f615df15908030d74d92a8 168 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 53 69 - T 11-10-2018 IPR002178 PTS EIIA type-2 domain AL543_04045 380d7d9ead4862bda9fca334c83fa3a6 254 Gene3D G3DSA:3.40.50.720 6 254 4.0E-90 T 11-10-2018 AL543_04045 380d7d9ead4862bda9fca334c83fa3a6 254 Pfam PF00899 ThiF family 14 247 1.9E-66 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AL543_04045 380d7d9ead4862bda9fca334c83fa3a6 254 SUPERFAMILY SSF69572 6 252 2.49E-87 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 AL543_04045 380d7d9ead4862bda9fca334c83fa3a6 254 TIGRFAM TIGR02355 moeB: molybdopterin synthase sulfurylase MoeB 10 250 1.8E-131 T 11-10-2018 IPR012730 Molybdopterin synthase sulfurylase MoeB GO:0006777 MetaCyc: PWY-6823 AL543_07225 bf3b1f1436a6ca9e15a412b23efe64b3 164 Gene3D G3DSA:3.30.70.1150 80 157 3.2E-28 T 11-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal AL543_07225 bf3b1f1436a6ca9e15a412b23efe64b3 164 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 159 5.0E-62 T 11-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AL543_07225 bf3b1f1436a6ca9e15a412b23efe64b3 164 SUPERFAMILY SSF55021 79 162 5.15E-27 T 11-10-2018 AL543_07225 bf3b1f1436a6ca9e15a412b23efe64b3 164 Pfam PF13710 ACT domain 11 73 2.7E-17 T 11-10-2018 AL543_07225 bf3b1f1436a6ca9e15a412b23efe64b3 164 Gene3D G3DSA:3.30.70.260 1 79 5.0E-32 T 11-10-2018 AL543_07225 bf3b1f1436a6ca9e15a412b23efe64b3 164 SUPERFAMILY SSF55021 1 75 3.31E-22 T 11-10-2018 AL543_07225 bf3b1f1436a6ca9e15a412b23efe64b3 164 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 75 2.0E-37 T 11-10-2018 AL543_07225 bf3b1f1436a6ca9e15a412b23efe64b3 164 Pfam PF10369 Small subunit of acetolactate synthase 84 158 1.5E-25 T 11-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AL543_11315 9c1d25a78609a78bbf25da9ee6ffb289 820 Gene3D G3DSA:3.20.20.80 163 448 1.7E-89 T 11-10-2018 AL543_11315 9c1d25a78609a78bbf25da9ee6ffb289 820 SUPERFAMILY SSF55545 30 164 2.88E-31 T 11-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 AL543_11315 9c1d25a78609a78bbf25da9ee6ffb289 820 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 30 162 5.4E-15 T 11-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal AL543_11315 9c1d25a78609a78bbf25da9ee6ffb289 820 PRINTS PR00738 Glycosyl hydrolase family 20 signature 188 209 4.0E-40 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL543_11315 9c1d25a78609a78bbf25da9ee6ffb289 820 PRINTS PR00738 Glycosyl hydrolase family 20 signature 159 176 4.0E-40 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL543_11315 9c1d25a78609a78bbf25da9ee6ffb289 820 PRINTS PR00738 Glycosyl hydrolase family 20 signature 124 144 4.0E-40 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL543_11315 9c1d25a78609a78bbf25da9ee6ffb289 820 PRINTS PR00738 Glycosyl hydrolase family 20 signature 240 257 4.0E-40 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL543_11315 9c1d25a78609a78bbf25da9ee6ffb289 820 PRINTS PR00738 Glycosyl hydrolase family 20 signature 290 308 4.0E-40 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL543_11315 9c1d25a78609a78bbf25da9ee6ffb289 820 PRINTS PR00738 Glycosyl hydrolase family 20 signature 312 325 4.0E-40 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL543_11315 9c1d25a78609a78bbf25da9ee6ffb289 820 SUPERFAMILY SSF51445 165 617 3.35E-101 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AL543_11315 9c1d25a78609a78bbf25da9ee6ffb289 820 Gene3D G3DSA:3.20.20.80 520 641 1.7E-14 T 11-10-2018 AL543_11315 9c1d25a78609a78bbf25da9ee6ffb289 820 Gene3D G3DSA:3.30.379.10 12 161 9.4E-24 T 11-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 AL543_11315 9c1d25a78609a78bbf25da9ee6ffb289 820 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 165 604 6.7E-118 T 11-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 AL543_15055 d16ccfafa5f888a09239f59558221e18 548 SUPERFAMILY SSF53383 26 530 5.58E-114 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL543_15055 d16ccfafa5f888a09239f59558221e18 548 Gene3D G3DSA:3.40.640.10 122 387 2.0E-110 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL543_15055 d16ccfafa5f888a09239f59558221e18 548 Gene3D G3DSA:3.90.1150.170 49 524 2.0E-110 T 11-10-2018 AL543_15055 d16ccfafa5f888a09239f59558221e18 548 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 63 442 1.6E-53 T 11-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 AL543_15055 d16ccfafa5f888a09239f59558221e18 548 TIGRFAM TIGR03799 NOD_PanD_pyr: putative pyridoxal-dependent aspartate 1-decarboxylase 7 527 1.1E-290 T 11-10-2018 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 AL543_03195 b919a1eaaa0ee1fecbf649e7d50a2edd 244 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 1.6E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL543_03195 b919a1eaaa0ee1fecbf649e7d50a2edd 244 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 1.6E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL543_03195 b919a1eaaa0ee1fecbf649e7d50a2edd 244 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 63 3.7E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL543_03195 b919a1eaaa0ee1fecbf649e7d50a2edd 244 SUPERFAMILY SSF46689 9 85 5.13E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_03195 b919a1eaaa0ee1fecbf649e7d50a2edd 244 Gene3D G3DSA:1.10.357.10 2 148 7.3E-21 T 11-10-2018 AL543_18750 4ff14a77e503b7ab8cc1d404ff289dac 698 Pfam PF10531 SLBB domain 493 536 1.8E-6 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL543_18750 4ff14a77e503b7ab8cc1d404ff289dac 698 Pfam PF10531 SLBB domain 102 146 0.0017 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL543_18750 4ff14a77e503b7ab8cc1d404ff289dac 698 Pfam PF10531 SLBB domain 588 630 1.1E-7 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL543_18750 4ff14a77e503b7ab8cc1d404ff289dac 698 Pfam PF10531 SLBB domain 209 250 7.1E-5 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL543_18750 4ff14a77e503b7ab8cc1d404ff289dac 698 Pfam PF10531 SLBB domain 296 349 1.3E-13 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL543_18750 4ff14a77e503b7ab8cc1d404ff289dac 698 Pfam PF10531 SLBB domain 393 443 3.9E-7 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL543_18750 4ff14a77e503b7ab8cc1d404ff289dac 698 Pfam PF02563 Polysaccharide biosynthesis/export protein 26 92 2.2E-10 T 11-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 AL543_18750 4ff14a77e503b7ab8cc1d404ff289dac 698 Gene3D G3DSA:3.30.1950.10 26 95 3.8E-6 T 11-10-2018 AL543_18750 4ff14a77e503b7ab8cc1d404ff289dac 698 Gene3D G3DSA:3.10.560.10 577 669 5.1E-18 T 11-10-2018 AL543_18750 4ff14a77e503b7ab8cc1d404ff289dac 698 Gene3D G3DSA:3.10.560.10 480 575 1.5E-16 T 11-10-2018 AL543_18750 4ff14a77e503b7ab8cc1d404ff289dac 698 Gene3D G3DSA:3.10.560.10 197 285 2.6E-15 T 11-10-2018 AL543_18750 4ff14a77e503b7ab8cc1d404ff289dac 698 Gene3D G3DSA:3.10.560.10 384 472 2.6E-13 T 11-10-2018 AL543_18750 4ff14a77e503b7ab8cc1d404ff289dac 698 Gene3D G3DSA:3.10.560.10 286 375 4.6E-17 T 11-10-2018 AL543_18750 4ff14a77e503b7ab8cc1d404ff289dac 698 Gene3D G3DSA:3.10.560.10 96 179 4.7E-14 T 11-10-2018 AL543_08675 21049e71affdd51d2213bc71531c08d6 151 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 65 134 3.1E-18 T 11-10-2018 IPR000504 RNA recognition motif domain GO:0003676 AL543_08675 21049e71affdd51d2213bc71531c08d6 151 SMART SM00360 64 136 2.8E-21 T 11-10-2018 IPR000504 RNA recognition motif domain GO:0003676 AL543_08675 21049e71affdd51d2213bc71531c08d6 151 Gene3D G3DSA:3.30.70.330 44 149 7.6E-27 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily AL543_08675 21049e71affdd51d2213bc71531c08d6 151 SUPERFAMILY SSF54928 54 142 2.01E-26 T 11-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 AL543_13495 f18a91df0f423b469a92f2019da70434 67 Pfam PF06786 Uncharacterised protein family (UPF0253) 1 67 1.2E-33 T 11-10-2018 IPR009624 Uncharacterised protein family UPF0253 AL543_13495 f18a91df0f423b469a92f2019da70434 67 ProDom PD054643 UPF0253 YAEP CYTOPLASMIC VP2335 YPO1064.1/Y3113/YP2785 VC0872 VV2574 PBPRA2947 VV11836 7 65 2.0E-20 T 11-10-2018 IPR009624 Uncharacterised protein family UPF0253 AL543_13495 f18a91df0f423b469a92f2019da70434 67 Hamap MF_01064 UPF0253 protein YaeP [yaeP]. 1 67 26.54 T 11-10-2018 IPR009624 Uncharacterised protein family UPF0253 AL543_03560 ca7e449db483b9b19f1b994c8c7ca228 1045 SMART SM00495 37 83 1.0E-15 T 11-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL543_03560 ca7e449db483b9b19f1b994c8c7ca228 1045 SMART SM00495 997 1042 0.015 T 11-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL543_03560 ca7e449db483b9b19f1b994c8c7ca228 1045 Pfam PF00704 Glycosyl hydrolases family 18 320 776 5.5E-84 T 11-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 AL543_03560 ca7e449db483b9b19f1b994c8c7ca228 1045 Gene3D G3DSA:2.60.40.10 193 281 1.6E-17 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL543_03560 ca7e449db483b9b19f1b994c8c7ca228 1045 Gene3D G3DSA:2.60.40.10 95 185 1.3E-24 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL543_03560 ca7e449db483b9b19f1b994c8c7ca228 1045 SMART SM00636 319 776 7.9E-121 T 11-10-2018 IPR011583 Chitinase II GO:0008061 AL543_03560 ca7e449db483b9b19f1b994c8c7ca228 1045 Gene3D G3DSA:3.20.20.80 748 776 3.2E-14 T 11-10-2018 AL543_03560 ca7e449db483b9b19f1b994c8c7ca228 1045 SUPERFAMILY SSF51055 22 86 1.83E-16 T 11-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL543_03560 ca7e449db483b9b19f1b994c8c7ca228 1045 SUPERFAMILY SSF54556 626 746 2.04E-13 T 11-10-2018 IPR029070 Chitinase insertion domain superfamily AL543_03560 ca7e449db483b9b19f1b994c8c7ca228 1045 Gene3D G3DSA:2.10.10.20 20 88 1.4E-13 T 11-10-2018 AL543_03560 ca7e449db483b9b19f1b994c8c7ca228 1045 SUPERFAMILY SSF51445 314 779 1.67E-74 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AL543_03560 ca7e449db483b9b19f1b994c8c7ca228 1045 Pfam PF06483 Chitinase C 804 969 5.8E-73 T 11-10-2018 IPR009470 Chitinase, C-terminal KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AL543_03560 ca7e449db483b9b19f1b994c8c7ca228 1045 Gene3D G3DSA:3.20.20.80 297 646 2.6E-80 T 11-10-2018 AL543_03560 ca7e449db483b9b19f1b994c8c7ca228 1045 Gene3D G3DSA:3.10.50.10 675 747 3.2E-14 T 11-10-2018 IPR029070 Chitinase insertion domain superfamily AL543_03560 ca7e449db483b9b19f1b994c8c7ca228 1045 ProSitePatterns PS01095 Chitinases family 18 active site. 468 476 - T 11-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AL543_07770 474b1e0adc858e495236133b6640a690 177 SUPERFAMILY SSF56053 1 82 7.85E-25 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07770 474b1e0adc858e495236133b6640a690 177 Gene3D G3DSA:3.90.930.12 83 177 3.1E-39 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07770 474b1e0adc858e495236133b6640a690 177 PIRSF PIRSF002162 1 177 1.1E-43 T 11-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07770 474b1e0adc858e495236133b6640a690 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.175 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AL543_07770 474b1e0adc858e495236133b6640a690 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 5.0E-74 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AL543_07770 474b1e0adc858e495236133b6640a690 177 Gene3D G3DSA:3.90.930.12 1 82 2.5E-31 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07770 474b1e0adc858e495236133b6640a690 177 SUPERFAMILY SSF56053 83 177 9.16E-36 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07770 474b1e0adc858e495236133b6640a690 177 Pfam PF00347 Ribosomal protein L6 11 82 3.8E-21 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07770 474b1e0adc858e495236133b6640a690 177 Pfam PF00347 Ribosomal protein L6 91 164 2.0E-18 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07770 474b1e0adc858e495236133b6640a690 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 2.0E-33 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AL543_07770 474b1e0adc858e495236133b6640a690 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 2.0E-33 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AL543_07770 474b1e0adc858e495236133b6640a690 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 2.0E-33 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AL543_07770 474b1e0adc858e495236133b6640a690 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 11-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_10325 6145237c7a277596f849653d3377f00c 582 SUPERFAMILY SSF52518 350 540 5.89E-19 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AL543_10325 6145237c7a277596f849653d3377f00c 582 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 13 173 1.1E-25 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AL543_10325 6145237c7a277596f849653d3377f00c 582 Gene3D G3DSA:3.40.50.970 355 551 1.6E-41 T 11-10-2018 AL543_10325 6145237c7a277596f849653d3377f00c 582 PIRSF PIRSF004983 1 556 5.8E-88 T 11-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 AL543_10325 6145237c7a277596f849653d3377f00c 582 SUPERFAMILY SSF52518 13 177 1.12E-26 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AL543_10325 6145237c7a277596f849653d3377f00c 582 Gene3D G3DSA:3.40.50.1220 194 351 3.8E-10 T 11-10-2018 AL543_10325 6145237c7a277596f849653d3377f00c 582 Gene3D G3DSA:3.40.50.970 2 173 7.0E-41 T 11-10-2018 AL543_10325 6145237c7a277596f849653d3377f00c 582 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 404 534 6.3E-5 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AL543_17460 344b911e1eff8e6eccee343c7c854df3 92 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 1 92 25.839 T 11-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 AL543_17460 344b911e1eff8e6eccee343c7c854df3 92 Gene3D G3DSA:2.40.240.10 1 92 3.3E-34 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AL543_17460 344b911e1eff8e6eccee343c7c854df3 92 SUPERFAMILY SSF50715 1 92 4.53E-28 T 11-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AL543_17460 344b911e1eff8e6eccee343c7c854df3 92 Pfam PF01386 Ribosomal L25p family 4 89 3.7E-23 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 AL543_17460 344b911e1eff8e6eccee343c7c854df3 92 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 1 92 4.0E-49 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 AL543_11525 9bd816316d4dace736a171d2a06ebc14 143 Pfam PF14467 Domain of unknown function (DUF4426) 23 142 1.6E-47 T 11-10-2018 IPR025218 Domain of unknown function DUF4426 AL543_11525 9bd816316d4dace736a171d2a06ebc14 143 Gene3D G3DSA:2.60.40.3340 14 143 3.7E-39 T 11-10-2018 AL543_16225 9512853ef601ea07bfe5e81f291ffd92 210 Pfam PF10816 Domain of unknown function (DUF2760) 87 209 1.5E-53 T 11-10-2018 IPR021212 Domain of unknown function DUF2760 AL543_16065 bd61e8438b17d679b304dfdaa5f65841 471 Pfam PF00293 NUDIX domain 26 105 4.3E-10 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL543_16065 bd61e8438b17d679b304dfdaa5f65841 471 Gene3D G3DSA:3.90.79.10 10 106 1.3E-12 T 11-10-2018 AL543_16065 bd61e8438b17d679b304dfdaa5f65841 471 SUPERFAMILY SSF55811 25 138 6.36E-16 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AL543_18115 27be939c0271dc0298e8c67567a7b950 250 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 113 215 2.6E-28 T 11-10-2018 IPR031571 Flp pilus assembly protein RcpC/CpaB domain AL543_18115 27be939c0271dc0298e8c67567a7b950 250 Pfam PF08666 SAF domain 45 105 4.1E-7 T 11-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AL543_18115 27be939c0271dc0298e8c67567a7b950 250 SMART SM00858 44 106 2.4E-5 T 11-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AL543_18115 27be939c0271dc0298e8c67567a7b950 250 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 7 226 1.4E-71 T 11-10-2018 IPR017592 Pilus assembly, Flp-type CpaB AL543_03175 755de70550cbdba7d1df9e961debb5ff 400 Pfam PF03222 Tryptophan/tyrosine permease family 4 385 3.1E-110 T 11-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 AL543_03175 755de70550cbdba7d1df9e961debb5ff 400 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 18 34 - T 11-10-2018 IPR013061 Tryptophan/tryrosine permease, conserved site AL543_03175 755de70550cbdba7d1df9e961debb5ff 400 Gene3D G3DSA:1.20.1740.10 3 398 1.8E-9 T 11-10-2018 AL543_03175 755de70550cbdba7d1df9e961debb5ff 400 PRINTS PR00166 Aromatic amino acid permease signature 334 353 7.7E-81 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL543_03175 755de70550cbdba7d1df9e961debb5ff 400 PRINTS PR00166 Aromatic amino acid permease signature 83 103 7.7E-81 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL543_03175 755de70550cbdba7d1df9e961debb5ff 400 PRINTS PR00166 Aromatic amino acid permease signature 149 169 7.7E-81 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL543_03175 755de70550cbdba7d1df9e961debb5ff 400 PRINTS PR00166 Aromatic amino acid permease signature 183 205 7.7E-81 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL543_03175 755de70550cbdba7d1df9e961debb5ff 400 PRINTS PR00166 Aromatic amino acid permease signature 313 331 7.7E-81 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL543_03175 755de70550cbdba7d1df9e961debb5ff 400 PRINTS PR00166 Aromatic amino acid permease signature 11 34 7.7E-81 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL543_03175 755de70550cbdba7d1df9e961debb5ff 400 PRINTS PR00166 Aromatic amino acid permease signature 38 57 7.7E-81 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL543_03175 755de70550cbdba7d1df9e961debb5ff 400 PRINTS PR00166 Aromatic amino acid permease signature 279 298 7.7E-81 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL543_03175 755de70550cbdba7d1df9e961debb5ff 400 PRINTS PR00166 Aromatic amino acid permease signature 222 241 7.7E-81 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL543_03175 755de70550cbdba7d1df9e961debb5ff 400 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 8 376 1.8E-111 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL543_15075 c7d52e894664eeacd21768f1150cf240 203 Gene3D G3DSA:1.10.150.20 118 203 1.5E-18 T 11-10-2018 AL543_15075 c7d52e894664eeacd21768f1150cf240 203 Pfam PF04993 TfoX N-terminal domain 17 106 2.9E-24 T 11-10-2018 IPR007076 TfoX, N-terminal AL543_15075 c7d52e894664eeacd21768f1150cf240 203 Pfam PF04994 TfoX C-terminal domain 119 197 4.5E-28 T 11-10-2018 IPR007077 TfoX, C-terminal AL543_15075 c7d52e894664eeacd21768f1150cf240 203 Gene3D G3DSA:3.30.1460.30 8 107 1.7E-16 T 11-10-2018 AL543_15075 c7d52e894664eeacd21768f1150cf240 203 PIRSF PIRSF028788 8 203 1.3E-34 T 11-10-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type AL543_15075 c7d52e894664eeacd21768f1150cf240 203 SUPERFAMILY SSF159894 8 107 2.07E-27 T 11-10-2018 AL543_11670 58c2db9d94c71f5728a48e9b78eb0675 260 SMART SM01134 77 238 3.2E-57 T 11-10-2018 AL543_11670 58c2db9d94c71f5728a48e9b78eb0675 260 SUPERFAMILY SSF46785 13 69 1.02E-11 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_11670 58c2db9d94c71f5728a48e9b78eb0675 260 SUPERFAMILY SSF100950 83 238 4.86E-31 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AL543_11670 58c2db9d94c71f5728a48e9b78eb0675 260 SMART SM00420 13 65 2.1E-14 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL543_11670 58c2db9d94c71f5728a48e9b78eb0675 260 Gene3D G3DSA:1.10.10.10 2 60 1.9E-5 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_11670 58c2db9d94c71f5728a48e9b78eb0675 260 Pfam PF08220 DeoR-like helix-turn-helix domain 13 65 1.1E-15 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL543_11670 58c2db9d94c71f5728a48e9b78eb0675 260 ProSitePatterns PS00894 DeoR-type HTH domain signature. 13 47 - T 11-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AL543_11670 58c2db9d94c71f5728a48e9b78eb0675 260 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 45 63 8.8E-5 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL543_11670 58c2db9d94c71f5728a48e9b78eb0675 260 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 31 45 8.8E-5 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL543_11670 58c2db9d94c71f5728a48e9b78eb0675 260 Pfam PF00455 DeoR C terminal sensor domain 82 237 1.2E-44 T 11-10-2018 IPR014036 DeoR C-terminal sensor domain AL543_03995 ad4898ae14d979576e275c11bd63da86 382 SUPERFAMILY SSF52540 11 371 1.84E-24 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_03995 ad4898ae14d979576e275c11bd63da86 382 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 34 369 7.3E-18 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL543_04215 5c1a023188b23edd147cabd7825f6e1a 261 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 25 260 1.4E-21 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL543_04215 5c1a023188b23edd147cabd7825f6e1a 261 Gene3D G3DSA:3.40.190.10 108 215 1.9E-20 T 11-10-2018 AL543_04215 5c1a023188b23edd147cabd7825f6e1a 261 Gene3D G3DSA:3.40.190.10 29 257 1.9E-20 T 11-10-2018 AL543_04215 5c1a023188b23edd147cabd7825f6e1a 261 SUPERFAMILY SSF53850 23 260 2.17E-27 T 11-10-2018 AL543_02910 b0cbd0447d931eef7ee606167a57dfc0 215 Gene3D G3DSA:3.20.20.70 1 215 3.7E-73 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_02910 b0cbd0447d931eef7ee606167a57dfc0 215 SUPERFAMILY SSF51366 1 212 2.72E-34 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AL543_02910 b0cbd0447d931eef7ee606167a57dfc0 215 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 204 8.0E-29 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL543_02910 b0cbd0447d931eef7ee606167a57dfc0 215 SMART SM00934 5 207 2.6E-25 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL543_10470 2575495aef871798a88862dcd2069eba 98 SUPERFAMILY SSF46689 8 98 1.84E-24 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_10470 2575495aef871798a88862dcd2069eba 98 PIRSF PIRSF002097 1 98 2.5E-44 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AL543_10470 2575495aef871798a88862dcd2069eba 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 31.402 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AL543_10470 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 2.0E-31 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AL543_10470 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 2.0E-31 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AL543_10470 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 2.0E-31 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AL543_10470 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 2.0E-31 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AL543_10470 2575495aef871798a88862dcd2069eba 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 4.0E-14 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL543_10470 2575495aef871798a88862dcd2069eba 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 3.3E-13 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL543_10470 2575495aef871798a88862dcd2069eba 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 3.3E-13 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL543_10470 2575495aef871798a88862dcd2069eba 98 Gene3D G3DSA:1.10.10.60 1 98 2.7E-32 T 11-10-2018 AL543_00735 6d3ca5e853b041ba74b37003fd8ed863 391 Gene3D G3DSA:3.30.70.270 186 366 7.3E-50 T 11-10-2018 AL543_00735 6d3ca5e853b041ba74b37003fd8ed863 391 SUPERFAMILY SSF55073 197 363 5.18E-44 T 11-10-2018 IPR029787 Nucleotide cyclase AL543_00735 6d3ca5e853b041ba74b37003fd8ed863 391 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 188 360 2.0E-42 T 11-10-2018 IPR000160 GGDEF domain AL543_00735 6d3ca5e853b041ba74b37003fd8ed863 391 SMART SM00267 181 361 7.8E-54 T 11-10-2018 IPR000160 GGDEF domain AL543_00735 6d3ca5e853b041ba74b37003fd8ed863 391 Pfam PF00990 Diguanylate cyclase, GGDEF domain 192 357 1.0E-39 T 11-10-2018 IPR000160 GGDEF domain AL543_07565 51826068b35ea65e642cd68a6ef43678 330 Pfam PF13343 Bacterial extracellular solute-binding protein 76 294 6.5E-21 T 11-10-2018 AL543_07565 51826068b35ea65e642cd68a6ef43678 330 Gene3D G3DSA:3.40.190.10 26 300 5.8E-116 T 11-10-2018 AL543_07565 51826068b35ea65e642cd68a6ef43678 330 SUPERFAMILY SSF53850 24 326 1.82E-66 T 11-10-2018 AL543_07565 51826068b35ea65e642cd68a6ef43678 330 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 9 329 2.3E-147 T 11-10-2018 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria GO:0015888|GO:0030288|GO:0030975 AL543_07565 51826068b35ea65e642cd68a6ef43678 330 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 21 324 6.0E-154 T 11-10-2018 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter GO:0015888|GO:0030975 AL543_07565 51826068b35ea65e642cd68a6ef43678 330 Gene3D G3DSA:3.40.190.10 126 325 5.8E-116 T 11-10-2018 AL543_18210 036b225c7c75defef9b467d64003ffb1 909 Gene3D G3DSA:3.30.2080.10 349 879 3.2E-198 T 11-10-2018 AL543_18210 036b225c7c75defef9b467d64003ffb1 909 Pfam PF07971 Glycosyl hydrolase family 92 285 876 1.4E-123 T 11-10-2018 IPR012939 Glycosyl hydrolase family 92 AL543_18210 036b225c7c75defef9b467d64003ffb1 909 SUPERFAMILY SSF48208 319 871 3.06E-7 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AL543_18210 036b225c7c75defef9b467d64003ffb1 909 Gene3D G3DSA:1.20.1050.60 429 544 3.2E-198 T 11-10-2018 AL543_18210 036b225c7c75defef9b467d64003ffb1 909 Gene3D G3DSA:2.70.98.10 53 428 3.2E-198 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AL543_18210 036b225c7c75defef9b467d64003ffb1 909 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 407 879 2.0E-96 T 11-10-2018 IPR005887 Alpha-1,2-mannosidase, putative AL543_18210 036b225c7c75defef9b467d64003ffb1 909 Gene3D G3DSA:1.20.1610.10 545 751 3.2E-198 T 11-10-2018 AL543_09465 6beecfc8b070f5e9cb9f63b6e0aa8c52 288 Gene3D G3DSA:3.40.1380.10 61 207 1.8E-109 T 11-10-2018 AL543_09465 6beecfc8b070f5e9cb9f63b6e0aa8c52 288 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 274 287 - T 11-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL543_09465 6beecfc8b070f5e9cb9f63b6e0aa8c52 288 Gene3D G3DSA:1.10.287.80 6 284 1.8E-109 T 11-10-2018 AL543_09465 6beecfc8b070f5e9cb9f63b6e0aa8c52 288 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 288 36.552 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL543_09465 6beecfc8b070f5e9cb9f63b6e0aa8c52 288 SUPERFAMILY SSF52943 2 288 3.53E-95 T 11-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL543_09465 6beecfc8b070f5e9cb9f63b6e0aa8c52 288 Pfam PF00231 ATP synthase 5 287 9.5E-96 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL543_09465 6beecfc8b070f5e9cb9f63b6e0aa8c52 288 PRINTS PR00126 ATP synthase gamma subunit signature 266 287 1.3E-36 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL543_09465 6beecfc8b070f5e9cb9f63b6e0aa8c52 288 PRINTS PR00126 ATP synthase gamma subunit signature 235 254 1.3E-36 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL543_09465 6beecfc8b070f5e9cb9f63b6e0aa8c52 288 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 1.3E-36 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL543_09465 6beecfc8b070f5e9cb9f63b6e0aa8c52 288 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 1.3E-36 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL543_09465 6beecfc8b070f5e9cb9f63b6e0aa8c52 288 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 288 1.7E-110 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL543_10260 26dfe3547737a515f6e6a93d21cc5ec2 442 Gene3D G3DSA:3.40.50.11720 49 226 3.3E-48 T 11-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 AL543_10260 26dfe3547737a515f6e6a93d21cc5ec2 442 Gene3D G3DSA:3.40.50.2000 234 421 2.0E-61 T 11-10-2018 AL543_10260 26dfe3547737a515f6e6a93d21cc5ec2 442 Pfam PF00534 Glycosyl transferases group 1 252 416 1.7E-8 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AL543_10260 26dfe3547737a515f6e6a93d21cc5ec2 442 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 50 228 2.1E-63 T 11-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 AL543_10260 26dfe3547737a515f6e6a93d21cc5ec2 442 SUPERFAMILY SSF53756 69 421 1.88E-15 T 11-10-2018 AL543_02320 ea902a2dd12802d581caf144853dc7e0 473 TIGRFAM TIGR02617 tnaA_trp_ase: tryptophanase 5 471 6.3E-303 T 11-10-2018 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 AL543_02320 ea902a2dd12802d581caf144853dc7e0 473 ProSitePatterns PS00853 Beta-eliminating lyases pyridoxal-phosphate attachment site. 260 278 - T 11-10-2018 IPR018176 Tryptophanase, conserved site KEGG: 00380+4.1.99.1 AL543_02320 ea902a2dd12802d581caf144853dc7e0 473 SUPERFAMILY SSF53383 6 469 3.21E-124 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL543_02320 ea902a2dd12802d581caf144853dc7e0 473 Hamap MF_00544 Tryptophanase [tnaA]. 4 471 96.776 T 11-10-2018 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 AL543_02320 ea902a2dd12802d581caf144853dc7e0 473 Pfam PF01212 Beta-eliminating lyase 49 437 3.5E-88 T 11-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 AL543_02320 ea902a2dd12802d581caf144853dc7e0 473 Gene3D G3DSA:3.40.640.10 61 334 1.8E-197 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL543_02320 ea902a2dd12802d581caf144853dc7e0 473 Gene3D G3DSA:3.90.1150.10 10 468 1.8E-197 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL543_02320 ea902a2dd12802d581caf144853dc7e0 473 PIRSF PIRSF001386 3 472 1.0E-204 T 11-10-2018 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1 AL543_06840 c10291715a9d40f962864a6d5050c660 316 PIRSF PIRSF004486 1 316 1.4E-100 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 AL543_06840 c10291715a9d40f962864a6d5050c660 316 Gene3D G3DSA:3.40.50.150 10 315 4.8E-102 T 11-10-2018 AL543_06840 c10291715a9d40f962864a6d5050c660 316 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 316 38.214 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 AL543_06840 c10291715a9d40f962864a6d5050c660 316 SUPERFAMILY SSF53335 7 316 1.47E-44 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL543_06840 c10291715a9d40f962864a6d5050c660 316 Gene3D G3DSA:1.10.150.170 112 218 4.8E-102 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 AL543_06840 c10291715a9d40f962864a6d5050c660 316 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 315 1.0E-118 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 AL543_06840 c10291715a9d40f962864a6d5050c660 316 Pfam PF01795 MraW methylase family 5 315 6.4E-110 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 AL543_06840 c10291715a9d40f962864a6d5050c660 316 SUPERFAMILY SSF81799 113 216 7.19E-31 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 AL543_02515 bbe918c8754816f55ada98f2e6e4b9e5 562 Pfam PF02384 N-6 DNA Methylase 8 217 4.4E-16 T 11-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 AL543_02515 bbe918c8754816f55ada98f2e6e4b9e5 562 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 14 30 2.0E-17 T 11-10-2018 AL543_02515 bbe918c8754816f55ada98f2e6e4b9e5 562 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 155 179 2.0E-17 T 11-10-2018 AL543_02515 bbe918c8754816f55ada98f2e6e4b9e5 562 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 38 52 2.0E-17 T 11-10-2018 AL543_02515 bbe918c8754816f55ada98f2e6e4b9e5 562 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 113 125 2.0E-17 T 11-10-2018 AL543_02515 bbe918c8754816f55ada98f2e6e4b9e5 562 SUPERFAMILY SSF53335 8 226 7.12E-33 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL543_02515 bbe918c8754816f55ada98f2e6e4b9e5 562 Gene3D G3DSA:3.40.50.150 16 251 7.1E-33 T 11-10-2018 AL543_02515 bbe918c8754816f55ada98f2e6e4b9e5 562 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 116 122 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AL543_14560 e998cec5c624e581dfca17450fd783c4 603 Gene3D G3DSA:3.10.620.30 381 534 2.9E-11 T 11-10-2018 AL543_14560 e998cec5c624e581dfca17450fd783c4 603 Pfam PF01841 Transglutaminase-like superfamily 423 524 7.6E-14 T 11-10-2018 IPR002931 Transglutaminase-like AL543_14560 e998cec5c624e581dfca17450fd783c4 603 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 25 114 2.6E-6 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL543_14560 e998cec5c624e581dfca17450fd783c4 603 SMART SM00460 455 526 2.8E-5 T 11-10-2018 IPR002931 Transglutaminase-like AL543_14560 e998cec5c624e581dfca17450fd783c4 603 Gene3D G3DSA:2.40.110.10 118 229 6.4E-35 T 11-10-2018 AL543_14560 e998cec5c624e581dfca17450fd783c4 603 SUPERFAMILY SSF54001 420 549 1.07E-19 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily AL543_14560 e998cec5c624e581dfca17450fd783c4 603 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 373 3.3E-25 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL543_14560 e998cec5c624e581dfca17450fd783c4 603 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 121 133 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AL543_14560 e998cec5c624e581dfca17450fd783c4 603 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 120 214 4.8E-21 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AL543_14560 e998cec5c624e581dfca17450fd783c4 603 Gene3D G3DSA:1.20.140.10 230 374 8.0E-31 T 11-10-2018 AL543_14560 e998cec5c624e581dfca17450fd783c4 603 SUPERFAMILY SSF47203 226 373 8.22E-32 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AL543_14560 e998cec5c624e581dfca17450fd783c4 603 Gene3D G3DSA:1.10.540.10 23 117 3.2E-7 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AL543_14560 e998cec5c624e581dfca17450fd783c4 603 SUPERFAMILY SSF56645 26 233 6.28E-50 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AL543_07435 366430cec3cbf023f2337c8b23cbe1de 129 Gene3D G3DSA:3.30.1330.40 2 129 1.3E-47 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AL543_07435 366430cec3cbf023f2337c8b23cbe1de 129 SUPERFAMILY SSF55298 2 128 1.52E-43 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AL543_07435 366430cec3cbf023f2337c8b23cbe1de 129 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 104 122 - T 11-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 AL543_07435 366430cec3cbf023f2337c8b23cbe1de 129 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 127 6.9E-52 T 11-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 AL543_07435 366430cec3cbf023f2337c8b23cbe1de 129 Pfam PF01042 Endoribonuclease L-PSP 8 127 1.7E-43 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 AL543_18455 f7bb9349f61a58b121c9517f30eebc91 758 Pfam PF02901 Pyruvate formate lyase-like 21 612 3.5E-207 T 11-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 AL543_18455 f7bb9349f61a58b121c9517f30eebc91 758 SUPERFAMILY SSF51998 4 757 6.71E-292 T 11-10-2018 AL543_18455 f7bb9349f61a58b121c9517f30eebc91 758 ProSitePatterns PS00850 Glycine radical domain signature. 728 736 - T 11-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AL543_18455 f7bb9349f61a58b121c9517f30eebc91 758 PIRSF PIRSF000379 5 758 0.0 T 11-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 AL543_18455 f7bb9349f61a58b121c9517f30eebc91 758 Pfam PF01228 Glycine radical 628 739 1.6E-43 T 11-10-2018 IPR001150 Glycine radical domain GO:0003824 AL543_18455 f7bb9349f61a58b121c9517f30eebc91 758 Gene3D G3DSA:3.20.70.20 1 758 0.0 T 11-10-2018 AL543_18455 f7bb9349f61a58b121c9517f30eebc91 758 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 8 758 0.0 T 11-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 AL543_02505 00bf36e60d98305b2d719af6b1ff77eb 347 TIGRFAM TIGR01305 GMP_reduct_1: guanosine monophosphate reductase 2 344 9.4E-184 T 11-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 AL543_02505 00bf36e60d98305b2d719af6b1ff77eb 347 SMART SM01240 7 344 9.7E-136 T 11-10-2018 AL543_02505 00bf36e60d98305b2d719af6b1ff77eb 347 Hamap MF_00596 GMP reductase [guaC]. 1 345 50.07 T 11-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 AL543_02505 00bf36e60d98305b2d719af6b1ff77eb 347 SUPERFAMILY SSF51412 6 336 1.7E-99 T 11-10-2018 AL543_02505 00bf36e60d98305b2d719af6b1ff77eb 347 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 176 188 - T 11-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 AL543_02505 00bf36e60d98305b2d719af6b1ff77eb 347 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 338 8.3E-80 T 11-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 AL543_02505 00bf36e60d98305b2d719af6b1ff77eb 347 PIRSF PIRSF000235 1 347 1.2E-193 T 11-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 AL543_02505 00bf36e60d98305b2d719af6b1ff77eb 347 Gene3D G3DSA:3.20.20.70 1 345 1.7E-117 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_20020 e8f9bf3a7b0f31d48ac862108c0b6d7d 302 SUPERFAMILY SSF54909 2 297 8.94E-96 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AL543_20020 e8f9bf3a7b0f31d48ac862108c0b6d7d 302 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 293 6.5E-88 T 11-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 AL543_20020 e8f9bf3a7b0f31d48ac862108c0b6d7d 302 Pfam PF04261 Dyp-type peroxidase family 5 293 1.4E-92 T 11-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 AL543_07420 2389b7bb120d007e0b25031c70c7fbba 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL543_07420 2389b7bb120d007e0b25031c70c7fbba 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 1.1E-45 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AL543_07420 2389b7bb120d007e0b25031c70c7fbba 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 4.8E-32 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AL543_07420 2389b7bb120d007e0b25031c70c7fbba 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 4.8E-32 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AL543_07420 2389b7bb120d007e0b25031c70c7fbba 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 4.8E-32 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AL543_07420 2389b7bb120d007e0b25031c70c7fbba 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 4.8E-32 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AL543_07420 2389b7bb120d007e0b25031c70c7fbba 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 230 240 4.8E-32 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AL543_07420 2389b7bb120d007e0b25031c70c7fbba 334 SUPERFAMILY SSF53671 4 333 2.36E-99 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AL543_07420 2389b7bb120d007e0b25031c70c7fbba 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 277 1.8E-25 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL543_07420 2389b7bb120d007e0b25031c70c7fbba 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 1.8E-25 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL543_07420 2389b7bb120d007e0b25031c70c7fbba 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 1.8E-25 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL543_07420 2389b7bb120d007e0b25031c70c7fbba 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 1.8E-25 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL543_07420 2389b7bb120d007e0b25031c70c7fbba 334 Gene3D G3DSA:3.40.50.1370 151 319 2.3E-145 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AL543_07420 2389b7bb120d007e0b25031c70c7fbba 334 Gene3D G3DSA:3.40.50.1370 5 329 2.3E-145 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AL543_07420 2389b7bb120d007e0b25031c70c7fbba 334 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 332 7.5E-134 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AL543_07420 2389b7bb120d007e0b25031c70c7fbba 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 157 330 4.0E-56 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AL543_07420 2389b7bb120d007e0b25031c70c7fbba 334 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 333 83.001 T 11-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 AL543_02530 2a65ecc2ad01accec5e783b26afed1a8 809 Gene3D G3DSA:3.30.565.10 635 788 2.1E-16 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_02530 2a65ecc2ad01accec5e783b26afed1a8 809 SUPERFAMILY SSF55874 642 789 6.68E-16 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_02530 2a65ecc2ad01accec5e783b26afed1a8 809 Gene3D G3DSA:3.30.565.10 7 203 1.1E-27 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_02530 2a65ecc2ad01accec5e783b26afed1a8 809 PRINTS PR00344 Bacterial sensor protein C-terminal signature 770 788 7.1E-5 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_02530 2a65ecc2ad01accec5e783b26afed1a8 809 PRINTS PR00344 Bacterial sensor protein C-terminal signature 721 735 7.1E-5 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_02530 2a65ecc2ad01accec5e783b26afed1a8 809 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 685 792 3.2E-9 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_02530 2a65ecc2ad01accec5e783b26afed1a8 809 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 33 149 1.6E-17 T 11-10-2018 AL543_02530 2a65ecc2ad01accec5e783b26afed1a8 809 SUPERFAMILY SSF55874 18 197 1.57E-18 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_02530 2a65ecc2ad01accec5e783b26afed1a8 809 Gene3D G3DSA:1.10.287.130 574 634 2.1E-16 T 11-10-2018 AL543_02530 2a65ecc2ad01accec5e783b26afed1a8 809 SMART SM00387 680 809 0.0012 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_01255 bb71c65855d0ade85723ea868824a2f5 145 Pfam PF01797 Transposase IS200 like 11 129 7.5E-37 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AL543_01255 bb71c65855d0ade85723ea868824a2f5 145 Gene3D G3DSA:3.30.70.1290 3 137 4.0E-44 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 AL543_01255 bb71c65855d0ade85723ea868824a2f5 145 SUPERFAMILY SSF143422 1 130 5.62E-44 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 AL543_01255 bb71c65855d0ade85723ea868824a2f5 145 SMART SM01321 11 129 5.1E-39 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AL543_17380 c16ad0e3b25db67b1c4ab5aada7111dc 414 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 3 145 1.4E-33 T 11-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 AL543_17380 c16ad0e3b25db67b1c4ab5aada7111dc 414 Gene3D G3DSA:3.40.50.720 4 398 3.4E-142 T 11-10-2018 AL543_17380 c16ad0e3b25db67b1c4ab5aada7111dc 414 Gene3D G3DSA:3.30.360.10 159 355 3.4E-142 T 11-10-2018 AL543_17380 c16ad0e3b25db67b1c4ab5aada7111dc 414 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 149 394 2.4E-29 T 11-10-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 AL543_17380 c16ad0e3b25db67b1c4ab5aada7111dc 414 SUPERFAMILY SSF51735 1 178 1.59E-16 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_15850 d735883759e2fc157d7a6e171de1c0f1 453 Pfam PF03313 Serine dehydratase alpha chain 184 448 8.0E-98 T 11-10-2018 IPR005130 Serine dehydratase-like, alpha subunit AL543_15850 d735883759e2fc157d7a6e171de1c0f1 453 Gene3D G3DSA:3.30.1330.90 10 159 4.2E-50 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 AL543_15850 d735883759e2fc157d7a6e171de1c0f1 453 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 3.4E-230 T 11-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AL543_15850 d735883759e2fc157d7a6e171de1c0f1 453 Pfam PF03315 Serine dehydratase beta chain 3 155 2.2E-55 T 11-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AL543_15850 d735883759e2fc157d7a6e171de1c0f1 453 SUPERFAMILY SSF143548 16 158 2.62E-45 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 AL543_10185 0b1959ddd78959fab381acc270a9d378 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 1.6E-77 T 11-10-2018 IPR001405 Uncharacterised protein family UPF0758 AL543_10185 0b1959ddd78959fab381acc270a9d378 224 Pfam PF04002 RadC-like JAB domain 104 222 5.5E-45 T 11-10-2018 IPR025657 RadC-like JAB domain AL543_10185 0b1959ddd78959fab381acc270a9d378 224 Gene3D G3DSA:1.10.150.20 44 87 2.9E-5 T 11-10-2018 AL543_10185 0b1959ddd78959fab381acc270a9d378 224 SUPERFAMILY SSF102712 133 190 7.59E-5 T 11-10-2018 AL543_10185 0b1959ddd78959fab381acc270a9d378 224 SUPERFAMILY SSF47781 17 91 2.67E-11 T 11-10-2018 IPR010994 RuvA domain 2-like AL543_10185 0b1959ddd78959fab381acc270a9d378 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 11-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site AL543_10185 0b1959ddd78959fab381acc270a9d378 224 Gene3D G3DSA:3.40.140.10 101 224 5.9E-44 T 11-10-2018 AL543_12450 d367d8ed2917db1601d1e6f352cdce2c 444 SUPERFAMILY SSF52540 146 378 1.25E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_12450 d367d8ed2917db1601d1e6f352cdce2c 444 Gene3D G3DSA:3.40.50.300 145 310 1.0E-42 T 11-10-2018 AL543_12450 d367d8ed2917db1601d1e6f352cdce2c 444 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 170 183 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL543_12450 d367d8ed2917db1601d1e6f352cdce2c 444 Pfam PF00158 Sigma-54 interaction domain 146 305 6.6E-40 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL543_12450 d367d8ed2917db1601d1e6f352cdce2c 444 SUPERFAMILY SSF46689 350 438 1.59E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_12450 d367d8ed2917db1601d1e6f352cdce2c 444 Gene3D G3DSA:1.10.10.60 387 440 1.5E-12 T 11-10-2018 AL543_12450 d367d8ed2917db1601d1e6f352cdce2c 444 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 352 361 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AL543_12450 d367d8ed2917db1601d1e6f352cdce2c 444 Pfam PF02954 Bacterial regulatory protein, Fis family 396 435 8.8E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL543_12450 d367d8ed2917db1601d1e6f352cdce2c 444 SUPERFAMILY SSF52172 26 190 2.15E-6 T 11-10-2018 IPR011006 CheY-like superfamily AL543_12450 d367d8ed2917db1601d1e6f352cdce2c 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 402 419 5.6E-5 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL543_12450 d367d8ed2917db1601d1e6f352cdce2c 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 419 439 5.6E-5 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL543_12450 d367d8ed2917db1601d1e6f352cdce2c 444 Gene3D G3DSA:1.10.8.60 312 382 2.3E-23 T 11-10-2018 AL543_12450 d367d8ed2917db1601d1e6f352cdce2c 444 SMART SM00382 166 303 1.2E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_20475 f18e3c95de18d3ec5e8527c6a7245958 814 Gene3D G3DSA:1.20.140.10 361 508 4.4E-99 T 11-10-2018 AL543_20475 f18e3c95de18d3ec5e8527c6a7245958 814 Gene3D G3DSA:2.40.110.10 237 360 4.4E-99 T 11-10-2018 AL543_20475 f18e3c95de18d3ec5e8527c6a7245958 814 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 361 508 6.1E-15 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL543_20475 f18e3c95de18d3ec5e8527c6a7245958 814 SUPERFAMILY SSF47203 361 508 1.05E-23 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AL543_20475 f18e3c95de18d3ec5e8527c6a7245958 814 Gene3D G3DSA:1.10.540.10 123 236 4.4E-99 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AL543_20475 f18e3c95de18d3ec5e8527c6a7245958 814 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 140 234 1.6E-15 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL543_20475 f18e3c95de18d3ec5e8527c6a7245958 814 SUPERFAMILY SSF56645 121 356 6.94E-41 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AL543_20475 f18e3c95de18d3ec5e8527c6a7245958 814 Pfam PF09317 Domain of unknown function (DUF1974) 515 796 2.0E-112 T 11-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 AL543_07785 bef206baad4ac70a20f61a523a57ab30 179 Gene3D G3DSA:3.30.1440.10 1 179 2.8E-80 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07785 bef206baad4ac70a20f61a523a57ab30 179 PIRSF PIRSF002161 1 179 3.6E-66 T 11-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07785 bef206baad4ac70a20f61a523a57ab30 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 11-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07785 bef206baad4ac70a20f61a523a57ab30 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 45.152 T 11-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_07785 bef206baad4ac70a20f61a523a57ab30 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 3.7E-41 T 11-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07785 bef206baad4ac70a20f61a523a57ab30 179 SUPERFAMILY SSF55282 4 179 8.95E-79 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07785 bef206baad4ac70a20f61a523a57ab30 179 Pfam PF00281 Ribosomal protein L5 24 80 1.2E-28 T 11-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_06800 0fdc60ad3837dbb77ee351ba4048c004 354 SUPERFAMILY SSF53756 6 352 1.15E-122 T 11-10-2018 AL543_06800 0fdc60ad3837dbb77ee351ba4048c004 354 Gene3D G3DSA:3.40.50.2000 162 319 3.8E-118 T 11-10-2018 AL543_06800 0fdc60ad3837dbb77ee351ba4048c004 354 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 2 349 8.3E-118 T 11-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL543_06800 0fdc60ad3837dbb77ee351ba4048c004 354 Gene3D G3DSA:3.40.50.2000 9 161 3.8E-118 T 11-10-2018 AL543_06800 0fdc60ad3837dbb77ee351ba4048c004 354 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 9 145 9.2E-48 T 11-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL543_06800 0fdc60ad3837dbb77ee351ba4048c004 354 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 185 338 5.2E-33 T 11-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 AL543_06800 0fdc60ad3837dbb77ee351ba4048c004 354 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 8 353 34.498 T 11-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL543_18280 3300ab0798d7adea440469019b5a4e23 190 SUPERFAMILY SSF101327 2 176 5.1E-34 T 11-10-2018 IPR036255 YgfB-like superfamily AL543_18280 3300ab0798d7adea440469019b5a4e23 190 Pfam PF03695 Uncharacterised protein family (UPF0149) 3 179 2.3E-40 T 11-10-2018 IPR011978 Uncharacterised protein family UPF0149 AL543_18280 3300ab0798d7adea440469019b5a4e23 190 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 2 175 2.4E-42 T 11-10-2018 IPR011978 Uncharacterised protein family UPF0149 AL543_01960 ba21e515f49faf98b3fb81f6750d548e 225 PIRSF PIRSF006171 1 220 3.4E-61 T 11-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 AL543_01960 ba21e515f49faf98b3fb81f6750d548e 225 Pfam PF00072 Response regulator receiver domain 4 115 1.9E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_01960 ba21e515f49faf98b3fb81f6750d548e 225 SUPERFAMILY SSF52172 1 126 6.69E-28 T 11-10-2018 IPR011006 CheY-like superfamily AL543_01960 ba21e515f49faf98b3fb81f6750d548e 225 SMART SM00448 2 115 6.1E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_01960 ba21e515f49faf98b3fb81f6750d548e 225 Gene3D G3DSA:3.40.50.2300 1 141 4.3E-23 T 11-10-2018 AL543_05085 f623a7edcd24971dd3ce75546414a813 137 SUPERFAMILY SSF55729 15 125 1.92E-16 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL543_05085 f623a7edcd24971dd3ce75546414a813 137 Pfam PF13673 Acetyltransferase (GNAT) domain 32 125 1.3E-11 T 11-10-2018 IPR000182 GNAT domain AL543_05085 f623a7edcd24971dd3ce75546414a813 137 Gene3D G3DSA:3.40.630.30 7 133 5.1E-21 T 11-10-2018 AL543_05880 6092e77e313c29db927962fedf00b517 111 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 14 109 22.068 T 11-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 AL543_05880 6092e77e313c29db927962fedf00b517 111 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 17 106 9.7E-31 T 11-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 AL543_05880 6092e77e313c29db927962fedf00b517 111 SUPERFAMILY SSF55248 16 109 3.4E-33 T 11-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 AL543_05880 6092e77e313c29db927962fedf00b517 111 Gene3D G3DSA:3.30.1360.20 15 111 1.2E-32 T 11-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 AL543_14520 8595823221ff3cebebf19c2e079020ae 297 SUPERFAMILY SSF53807 32 294 5.49E-59 T 11-10-2018 AL543_14520 8595823221ff3cebebf19c2e079020ae 297 Gene3D G3DSA:3.40.50.1980 124 297 5.3E-55 T 11-10-2018 AL543_14520 8595823221ff3cebebf19c2e079020ae 297 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 238 255 2.3E-16 T 11-10-2018 AL543_14520 8595823221ff3cebebf19c2e079020ae 297 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 85 100 2.3E-16 T 11-10-2018 AL543_14520 8595823221ff3cebebf19c2e079020ae 297 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 54 72 2.3E-16 T 11-10-2018 AL543_14520 8595823221ff3cebebf19c2e079020ae 297 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 210 228 2.3E-16 T 11-10-2018 AL543_14520 8595823221ff3cebebf19c2e079020ae 297 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 275 288 2.3E-16 T 11-10-2018 AL543_14520 8595823221ff3cebebf19c2e079020ae 297 Gene3D G3DSA:3.40.50.1980 21 121 6.4E-27 T 11-10-2018 AL543_14520 8595823221ff3cebebf19c2e079020ae 297 Pfam PF01497 Periplasmic binding protein 37 273 4.8E-28 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain AL543_18255 be566365c8f9368c073e7d0188e5f096 279 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 260 2.0E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL543_18255 be566365c8f9368c073e7d0188e5f096 279 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 260 276 2.0E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL543_18255 be566365c8f9368c073e7d0188e5f096 279 Pfam PF12833 Helix-turn-helix domain 199 277 5.1E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL543_18255 be566365c8f9368c073e7d0188e5f096 279 SUPERFAMILY SSF46689 179 226 1.25E-6 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_18255 be566365c8f9368c073e7d0188e5f096 279 Gene3D G3DSA:1.10.10.60 176 226 2.2E-12 T 11-10-2018 AL543_18255 be566365c8f9368c073e7d0188e5f096 279 SMART SM00342 193 276 1.6E-30 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL543_18255 be566365c8f9368c073e7d0188e5f096 279 SUPERFAMILY SSF46689 229 278 1.3E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_18255 be566365c8f9368c073e7d0188e5f096 279 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 230 272 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL543_18255 be566365c8f9368c073e7d0188e5f096 279 Gene3D G3DSA:1.10.10.60 227 279 2.4E-17 T 11-10-2018 AL543_19715 75fb43dd1ad7815259f0d24d25e4083a 294 Pfam PF01297 Zinc-uptake complex component A periplasmic 23 288 2.6E-53 T 11-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 AL543_19715 75fb43dd1ad7815259f0d24d25e4083a 294 SUPERFAMILY SSF53807 13 292 3.04E-71 T 11-10-2018 AL543_19715 75fb43dd1ad7815259f0d24d25e4083a 294 PRINTS PR00691 Adhesin B signature 64 83 1.2E-7 T 11-10-2018 IPR006129 Adhesin B GO:0007155 AL543_19715 75fb43dd1ad7815259f0d24d25e4083a 294 PRINTS PR00691 Adhesin B signature 281 294 1.2E-7 T 11-10-2018 IPR006129 Adhesin B GO:0007155 AL543_19715 75fb43dd1ad7815259f0d24d25e4083a 294 PRINTS PR00691 Adhesin B signature 45 63 1.2E-7 T 11-10-2018 IPR006129 Adhesin B GO:0007155 AL543_19715 75fb43dd1ad7815259f0d24d25e4083a 294 PRINTS PR00691 Adhesin B signature 124 143 1.2E-7 T 11-10-2018 IPR006129 Adhesin B GO:0007155 AL543_19715 75fb43dd1ad7815259f0d24d25e4083a 294 PRINTS PR00690 Adhesin family signature 51 64 4.6E-8 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 AL543_19715 75fb43dd1ad7815259f0d24d25e4083a 294 PRINTS PR00690 Adhesin family signature 180 201 4.6E-8 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 AL543_19715 75fb43dd1ad7815259f0d24d25e4083a 294 PRINTS PR00690 Adhesin family signature 64 81 4.6E-8 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 AL543_19715 75fb43dd1ad7815259f0d24d25e4083a 294 PRINTS PR00690 Adhesin family signature 233 251 4.6E-8 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 AL543_19715 75fb43dd1ad7815259f0d24d25e4083a 294 Gene3D G3DSA:3.40.50.1980 181 294 1.1E-39 T 11-10-2018 AL543_19715 75fb43dd1ad7815259f0d24d25e4083a 294 Gene3D G3DSA:3.40.50.1980 22 180 2.2E-46 T 11-10-2018 AL543_03695 6f0cbf2a3a439c8c2cab25eba077bb3d 392 SUPERFAMILY SSF48452 52 212 2.12E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_03695 6f0cbf2a3a439c8c2cab25eba077bb3d 392 Gene3D G3DSA:1.25.40.10 21 232 2.6E-20 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_03695 6f0cbf2a3a439c8c2cab25eba077bb3d 392 Pfam PF13432 Tetratricopeptide repeat 124 187 5.7E-8 T 11-10-2018 AL543_03695 6f0cbf2a3a439c8c2cab25eba077bb3d 392 SMART SM00028 120 153 1.4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL543_03695 6f0cbf2a3a439c8c2cab25eba077bb3d 392 SMART SM00028 86 119 370.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL543_03695 6f0cbf2a3a439c8c2cab25eba077bb3d 392 SMART SM00028 154 187 44.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL543_19535 80dda07a225b092621b04346f74e145a 647 Gene3D G3DSA:1.10.460.10 163 607 2.3E-162 T 11-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AL543_19535 80dda07a225b092621b04346f74e145a 647 Pfam PF01131 DNA topoisomerase 159 598 8.4E-115 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL543_19535 80dda07a225b092621b04346f74e145a 647 Gene3D G3DSA:2.70.20.10 218 493 2.3E-162 T 11-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AL543_19535 80dda07a225b092621b04346f74e145a 647 SUPERFAMILY SSF56712 3 611 1.1E-184 T 11-10-2018 IPR023405 DNA topoisomerase, type IA, core domain AL543_19535 80dda07a225b092621b04346f74e145a 647 SMART SM00437 284 563 5.9E-89 T 11-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 AL543_19535 80dda07a225b092621b04346f74e145a 647 Pfam PF01751 Toprim domain 4 135 1.5E-16 T 11-10-2018 IPR006171 TOPRIM domain AL543_19535 80dda07a225b092621b04346f74e145a 647 SMART SM00436 129 224 2.5E-33 T 11-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 AL543_19535 80dda07a225b092621b04346f74e145a 647 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 321 336 - T 11-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 AL543_19535 80dda07a225b092621b04346f74e145a 647 Gene3D G3DSA:3.40.50.140 2 157 2.4E-61 T 11-10-2018 AL543_19535 80dda07a225b092621b04346f74e145a 647 SMART SM00493 2 125 1.3E-27 T 11-10-2018 IPR006171 TOPRIM domain AL543_19535 80dda07a225b092621b04346f74e145a 647 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 327 336 3.8E-26 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL543_19535 80dda07a225b092621b04346f74e145a 647 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 408 424 3.8E-26 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL543_19535 80dda07a225b092621b04346f74e145a 647 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 194 212 3.8E-26 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL543_19535 80dda07a225b092621b04346f74e145a 647 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 99 112 3.8E-26 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL543_19535 80dda07a225b092621b04346f74e145a 647 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 526 540 3.8E-26 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL543_19535 80dda07a225b092621b04346f74e145a 647 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 626 8.9E-239 T 11-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 AL543_19535 80dda07a225b092621b04346f74e145a 647 Gene3D G3DSA:1.10.290.10 293 422 2.3E-162 T 11-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 AL543_19535 80dda07a225b092621b04346f74e145a 647 Hamap MF_00953 DNA topoisomerase 3 [topB]. 2 647 69.995 T 11-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 AL543_13620 7e105c437d24f4720d0c0fed6995a3ee 524 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 363 521 5.4E-37 T 11-10-2018 IPR000160 GGDEF domain AL543_13620 7e105c437d24f4720d0c0fed6995a3ee 524 Pfam PF00990 Diguanylate cyclase, GGDEF domain 364 517 2.9E-36 T 11-10-2018 IPR000160 GGDEF domain AL543_13620 7e105c437d24f4720d0c0fed6995a3ee 524 Gene3D G3DSA:3.30.70.270 361 524 2.3E-41 T 11-10-2018 AL543_13620 7e105c437d24f4720d0c0fed6995a3ee 524 SUPERFAMILY SSF55073 369 522 7.45E-37 T 11-10-2018 IPR029787 Nucleotide cyclase AL543_13620 7e105c437d24f4720d0c0fed6995a3ee 524 SMART SM00267 354 524 1.5E-36 T 11-10-2018 IPR000160 GGDEF domain AL543_02580 5264ac9eebf01d3f1cf5d77f096b5d56 861 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 183 518 3.9E-134 T 11-10-2018 IPR008766 Replication gene A protein GO:0006260 AL543_00660 6c9b22b6c795e041d58a1fd3751fd8bd 224 Gene3D G3DSA:3.40.50.2300 1 182 7.4E-63 T 11-10-2018 AL543_00660 6c9b22b6c795e041d58a1fd3751fd8bd 224 Gene3D G3DSA:3.40.50.2300 183 224 3.1E-14 T 11-10-2018 AL543_00660 6c9b22b6c795e041d58a1fd3751fd8bd 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 173 2.7E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_00660 6c9b22b6c795e041d58a1fd3751fd8bd 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 189 201 2.7E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_00660 6c9b22b6c795e041d58a1fd3751fd8bd 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 189 2.7E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_00660 6c9b22b6c795e041d58a1fd3751fd8bd 224 Pfam PF00196 Bacterial regulatory proteins, luxR family 158 213 9.2E-20 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_00660 6c9b22b6c795e041d58a1fd3751fd8bd 224 ProSitePatterns PS00622 LuxR-type HTH domain signature. 173 200 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_00660 6c9b22b6c795e041d58a1fd3751fd8bd 224 SMART SM00421 156 213 5.3E-23 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL543_00660 6c9b22b6c795e041d58a1fd3751fd8bd 224 SUPERFAMILY SSF46894 150 215 3.74E-20 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL543_01570 3764205078da085c2a2289ff2702429d 306 Pfam PF03734 L,D-transpeptidase catalytic domain 95 229 3.9E-22 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AL543_01570 3764205078da085c2a2289ff2702429d 306 SUPERFAMILY SSF141523 94 229 1.44E-29 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AL543_01570 3764205078da085c2a2289ff2702429d 306 SMART SM00257 38 82 1.7E-8 T 11-10-2018 IPR018392 LysM domain AL543_01570 3764205078da085c2a2289ff2702429d 306 SUPERFAMILY SSF54106 37 82 1.96E-6 T 11-10-2018 AL543_01570 3764205078da085c2a2289ff2702429d 306 Pfam PF01476 LysM domain 39 82 7.7E-9 T 11-10-2018 IPR018392 LysM domain AL543_01570 3764205078da085c2a2289ff2702429d 306 Gene3D G3DSA:2.40.440.10 18 297 1.0E-84 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AL543_01980 356769d08a5c6ce790158fd03d1e06c1 436 PRINTS PR00173 Glutamate-aspartate symporter signature 10 30 2.7E-49 T 11-10-2018 AL543_01980 356769d08a5c6ce790158fd03d1e06c1 436 PRINTS PR00173 Glutamate-aspartate symporter signature 59 79 2.7E-49 T 11-10-2018 AL543_01980 356769d08a5c6ce790158fd03d1e06c1 436 PRINTS PR00173 Glutamate-aspartate symporter signature 89 114 2.7E-49 T 11-10-2018 AL543_01980 356769d08a5c6ce790158fd03d1e06c1 436 PRINTS PR00173 Glutamate-aspartate symporter signature 199 218 2.7E-49 T 11-10-2018 AL543_01980 356769d08a5c6ce790158fd03d1e06c1 436 PRINTS PR00173 Glutamate-aspartate symporter signature 301 327 2.7E-49 T 11-10-2018 AL543_01980 356769d08a5c6ce790158fd03d1e06c1 436 PRINTS PR00173 Glutamate-aspartate symporter signature 336 355 2.7E-49 T 11-10-2018 AL543_01980 356769d08a5c6ce790158fd03d1e06c1 436 PRINTS PR00173 Glutamate-aspartate symporter signature 363 383 2.7E-49 T 11-10-2018 AL543_01980 356769d08a5c6ce790158fd03d1e06c1 436 Gene3D G3DSA:1.10.3860.10 3 428 9.5E-141 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AL543_01980 356769d08a5c6ce790158fd03d1e06c1 436 SUPERFAMILY SSF118215 12 410 4.84E-121 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AL543_01980 356769d08a5c6ce790158fd03d1e06c1 436 Pfam PF00375 Sodium:dicarboxylate symporter family 12 408 6.1E-131 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL543_18515 989e74f9c24a4897d1321170f640bdb0 410 Pfam PF01547 Bacterial extracellular solute-binding protein 46 284 1.5E-14 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein AL543_18515 989e74f9c24a4897d1321170f640bdb0 410 Gene3D G3DSA:3.40.190.10 21 367 6.4E-122 T 11-10-2018 AL543_18515 989e74f9c24a4897d1321170f640bdb0 410 Gene3D G3DSA:3.40.190.10 136 392 6.4E-122 T 11-10-2018 AL543_18515 989e74f9c24a4897d1321170f640bdb0 410 SUPERFAMILY SSF53850 21 405 1.47E-43 T 11-10-2018 AL543_02470 f30dd64af823ebd031efa5030191768b 148 SMART SM00091 12 78 0.002 T 11-10-2018 IPR000014 PAS domain AL543_02470 f30dd64af823ebd031efa5030191768b 148 Pfam PF00989 PAS fold 16 66 4.4E-7 T 11-10-2018 IPR013767 PAS fold GO:0006355 AL543_02470 f30dd64af823ebd031efa5030191768b 148 Gene3D G3DSA:3.30.450.20 6 140 7.2E-31 T 11-10-2018 AL543_02470 f30dd64af823ebd031efa5030191768b 148 SUPERFAMILY SSF55785 9 101 8.2E-12 T 11-10-2018 IPR035965 PAS domain superfamily AL543_20085 eded01a7722220f10cbce63571285982 356 Pfam PF01594 AI-2E family transporter 20 345 1.0E-78 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like AL543_10930 00546ef568bde59e47c7e6967ee6432f 122 Pfam PF01250 Ribosomal protein S6 3 91 1.4E-28 T 11-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_10930 00546ef568bde59e47c7e6967ee6432f 122 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 22.143 T 11-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 AL543_10930 00546ef568bde59e47c7e6967ee6432f 122 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 11-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 AL543_10930 00546ef568bde59e47c7e6967ee6432f 122 Gene3D G3DSA:3.30.70.60 1 92 3.3E-33 T 11-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 AL543_10930 00546ef568bde59e47c7e6967ee6432f 122 SUPERFAMILY SSF54995 1 103 1.44E-38 T 11-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_10930 00546ef568bde59e47c7e6967ee6432f 122 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 1.1E-38 T 11-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_17875 18a2256fd6da0043232a12e518efab92 247 Gene3D G3DSA:1.10.10.2260 95 202 9.9E-50 T 11-10-2018 AL543_17875 18a2256fd6da0043232a12e518efab92 247 Gene3D G3DSA:1.10.10.2250 8 85 6.2E-37 T 11-10-2018 AL543_17875 18a2256fd6da0043232a12e518efab92 247 Pfam PF04288 MukE-like family 17 241 8.3E-118 T 11-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 AL543_17875 18a2256fd6da0043232a12e518efab92 247 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 17 246 48.405 T 11-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 AL543_02695 53673c7f92c92eb2f6ea9a39c4261711 110 Pfam PF10761 Protein of unknown function (DUF2590) 7 102 4.2E-30 T 11-10-2018 IPR019697 Bacteriophage HP1, Orf28 AL543_17140 aaf9c5106b425ab7188f90d59da86dc1 417 Pfam PF01458 Uncharacterized protein family (UPF0051) 169 390 1.3E-60 T 11-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 AL543_17140 aaf9c5106b425ab7188f90d59da86dc1 417 SUPERFAMILY SSF101960 23 416 3.53E-90 T 11-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily AL543_17140 aaf9c5106b425ab7188f90d59da86dc1 417 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 132 406 2.4E-73 T 11-10-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 AL543_16915 9ad4e2c882b1c53fb4b3eba23a712840 203 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 16 196 5.6E-72 T 11-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 AL543_16915 9ad4e2c882b1c53fb4b3eba23a712840 203 Pfam PF12804 MobA-like NTP transferase domain 18 166 6.5E-36 T 11-10-2018 IPR025877 MobA-like NTP transferase AL543_16915 9ad4e2c882b1c53fb4b3eba23a712840 203 SUPERFAMILY SSF53448 18 195 6.22E-36 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL543_16915 9ad4e2c882b1c53fb4b3eba23a712840 203 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 13 198 30.282 T 11-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 AL543_16915 9ad4e2c882b1c53fb4b3eba23a712840 203 Gene3D G3DSA:3.90.550.10 11 200 1.5E-57 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL543_16095 eeb51da34425ace5c4e1afef293a2a5f 379 SMART SM00471 170 321 5.8E-9 T 11-10-2018 IPR003607 HD/PDEase domain AL543_16095 eeb51da34425ace5c4e1afef293a2a5f 379 Pfam PF00072 Response regulator receiver domain 11 121 6.6E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_16095 eeb51da34425ace5c4e1afef293a2a5f 379 SUPERFAMILY SSF52172 8 155 1.71E-37 T 11-10-2018 IPR011006 CheY-like superfamily AL543_16095 eeb51da34425ace5c4e1afef293a2a5f 379 SMART SM00448 9 121 1.5E-33 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_16095 eeb51da34425ace5c4e1afef293a2a5f 379 Gene3D G3DSA:3.40.50.2300 1 135 2.6E-36 T 11-10-2018 AL543_16095 eeb51da34425ace5c4e1afef293a2a5f 379 Pfam PF13487 HD domain 233 303 1.8E-19 T 11-10-2018 AL543_16095 eeb51da34425ace5c4e1afef293a2a5f 379 Gene3D G3DSA:1.10.3210.10 148 365 5.8E-77 T 11-10-2018 AL543_16095 eeb51da34425ace5c4e1afef293a2a5f 379 SUPERFAMILY SSF109604 149 348 3.77E-33 T 11-10-2018 AL543_14740 640dabc1cc942ab1a23c23119516e2eb 434 Gene3D G3DSA:1.10.287.130 170 266 5.3E-19 T 11-10-2018 AL543_14740 640dabc1cc942ab1a23c23119516e2eb 434 SMART SM00387 312 428 2.3E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_14740 640dabc1cc942ab1a23c23119516e2eb 434 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 315 426 1.0E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_14740 640dabc1cc942ab1a23c23119516e2eb 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 425 6.6E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_14740 640dabc1cc942ab1a23c23119516e2eb 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 406 6.6E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_14740 640dabc1cc942ab1a23c23119516e2eb 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 371 6.6E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_14740 640dabc1cc942ab1a23c23119516e2eb 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 385 6.6E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL543_14740 640dabc1cc942ab1a23c23119516e2eb 434 Gene3D G3DSA:3.30.565.10 273 432 5.1E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_14740 640dabc1cc942ab1a23c23119516e2eb 434 Pfam PF00512 His Kinase A (phospho-acceptor) domain 188 263 5.7E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL543_14740 640dabc1cc942ab1a23c23119516e2eb 434 SUPERFAMILY SSF47384 178 226 2.75E-6 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL543_14740 640dabc1cc942ab1a23c23119516e2eb 434 SUPERFAMILY SSF55874 269 426 6.94E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_20325 a320b1b9bd06a9fb18f9003cbd2185ee 235 Pfam PF13860 FlgD Ig-like domain 118 185 9.7E-21 T 11-10-2018 IPR025965 FlgD Ig-like domain AL543_20325 a320b1b9bd06a9fb18f9003cbd2185ee 235 Gene3D G3DSA:2.30.30.910 94 220 9.4E-37 T 11-10-2018 AL543_20325 a320b1b9bd06a9fb18f9003cbd2185ee 235 Pfam PF03963 Flagellar hook capping protein - N-terminal region 22 85 4.5E-21 T 11-10-2018 IPR005648 Flagellar hook capping protein AL543_20325 a320b1b9bd06a9fb18f9003cbd2185ee 235 Gene3D G3DSA:2.60.40.4070 110 196 9.4E-37 T 11-10-2018 AL543_20325 a320b1b9bd06a9fb18f9003cbd2185ee 235 Pfam PF13861 FlgD Tudor-like domain 93 229 8.7E-15 T 11-10-2018 IPR025963 FlgD Tudor-like domain AL543_11130 3fadee5b9b8f71080eb97f2df6801482 177 Gene3D G3DSA:2.40.50.140 1 116 8.6E-50 T 11-10-2018 AL543_11130 3fadee5b9b8f71080eb97f2df6801482 177 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 177 9.5E-62 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AL543_11130 3fadee5b9b8f71080eb97f2df6801482 177 Hamap MF_00984 Single-stranded DNA-binding protein. 6 118 39.389 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AL543_11130 3fadee5b9b8f71080eb97f2df6801482 177 SUPERFAMILY SSF50249 4 177 4.8E-61 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL543_11130 3fadee5b9b8f71080eb97f2df6801482 177 Pfam PF00436 Single-strand binding protein family 6 105 2.7E-43 T 11-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 AL543_03680 3f3d0fda2c84d9289b3890e5de80018c 421 SUPERFAMILY SSF52540 56 353 1.53E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_03680 3f3d0fda2c84d9289b3890e5de80018c 421 Gene3D G3DSA:3.40.50.300 168 408 1.3E-72 T 11-10-2018 AL543_03680 3f3d0fda2c84d9289b3890e5de80018c 421 Gene3D G3DSA:3.30.450.380 2 166 2.9E-37 T 11-10-2018 AL543_03680 3f3d0fda2c84d9289b3890e5de80018c 421 Pfam PF00437 Type II/IV secretion system protein 71 347 2.5E-82 T 11-10-2018 IPR001482 Type II/IV secretion system protein AL543_16445 8b0307b3fa43f917bf84b96cff26e16f 126 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 119 1.7E-14 T 11-10-2018 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10 AL543_16445 8b0307b3fa43f917bf84b96cff26e16f 126 Gene3D G3DSA:3.30.429.10 1 121 2.5E-40 T 11-10-2018 IPR014347 Tautomerase/MIF superfamily AL543_16445 8b0307b3fa43f917bf84b96cff26e16f 126 SUPERFAMILY SSF55331 1 119 4.49E-37 T 11-10-2018 IPR014347 Tautomerase/MIF superfamily AL543_06090 91b6b773f30b29ceb4736e7ee846bff2 350 Gene3D G3DSA:3.40.1390.10 1 98 3.0E-28 T 11-10-2018 AL543_06090 91b6b773f30b29ceb4736e7ee846bff2 350 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 329 1.5E-119 T 11-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 AL543_06090 91b6b773f30b29ceb4736e7ee846bff2 350 SUPERFAMILY SSF51161 32 316 1.8E-85 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AL543_06090 91b6b773f30b29ceb4736e7ee846bff2 350 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 106 134 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AL543_06090 91b6b773f30b29ceb4736e7ee846bff2 350 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 147 179 1.2E-8 T 11-10-2018 IPR001451 Hexapeptide repeat AL543_06090 91b6b773f30b29ceb4736e7ee846bff2 350 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 222 257 3.1E-4 T 11-10-2018 IPR001451 Hexapeptide repeat AL543_06090 91b6b773f30b29ceb4736e7ee846bff2 350 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 144 1.9E-10 T 11-10-2018 IPR001451 Hexapeptide repeat AL543_06090 91b6b773f30b29ceb4736e7ee846bff2 350 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 24 88 9.4E-20 T 11-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 AL543_06090 91b6b773f30b29ceb4736e7ee846bff2 350 Gene3D G3DSA:2.160.10.10 100 308 6.5E-66 T 11-10-2018 AL543_06090 91b6b773f30b29ceb4736e7ee846bff2 350 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 5 326 35.424 T 11-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 AL543_14440 0cbd4bac41b9644c932b172b1af18cf5 144 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 33 136 2.9E-41 T 11-10-2018 IPR039366 YscW/ExsB AL543_15480 f77edce42cd48ff98574dfe5533905fd 129 Hamap MF_01144 UPF0299 membrane protein YohJ [yohJ]. 6 125 22.182 T 11-10-2018 IPR022957 Uncharacterised protein family UPF0299 AL543_15480 f77edce42cd48ff98574dfe5533905fd 129 Pfam PF03788 LrgA family 25 116 1.4E-23 T 11-10-2018 IPR005538 LrgA/CidA family GO:0016021 AL543_15510 0676c598fac211335ac249f1bdd79a8c 179 Gene3D G3DSA:3.40.50.300 3 177 2.7E-59 T 11-10-2018 AL543_15510 0676c598fac211335ac249f1bdd79a8c 179 SUPERFAMILY SSF52540 3 177 5.77E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_15510 0676c598fac211335ac249f1bdd79a8c 179 PIRSF PIRSF006135 2 179 6.8E-57 T 11-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 AL543_15510 0676c598fac211335ac249f1bdd79a8c 179 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 5 176 6.8E-61 T 11-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 AL543_05150 443bd2f581112efd87a628b0cd90bc76 81 Pfam PF01391 Collagen triple helix repeat (20 copies) 20 66 6.5E-9 T 11-10-2018 IPR008160 Collagen triple helix repeat AL543_16430 059d9908238ae95656b257742f55fafe 215 Gene3D G3DSA:3.90.850.10 5 214 7.8E-42 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AL543_16430 059d9908238ae95656b257742f55fafe 215 TIGRFAM TIGR02305 HpaG-N-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit 7 210 1.2E-87 T 11-10-2018 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit GO:0008704|GO:0018800 KEGG: 00350+5.3.3.10+4.1.1.68 AL543_16430 059d9908238ae95656b257742f55fafe 215 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 8 208 4.7E-30 T 11-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 AL543_16430 059d9908238ae95656b257742f55fafe 215 SUPERFAMILY SSF56529 7 207 4.84E-42 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AL543_03990 5569135e8c64ec8d70919306f1cbba5e 348 Pfam PF05145 Transition state regulatory protein AbrB 84 338 2.6E-46 T 11-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 AL543_03990 5569135e8c64ec8d70919306f1cbba5e 348 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 184 335 2.4E-29 T 11-10-2018 IPR017516 AbrB duplication AL543_15820 9ecf78711aeb3fe133e986917c8a408c 492 SUPERFAMILY SSF109604 279 477 5.34E-33 T 11-10-2018 AL543_15820 9ecf78711aeb3fe133e986917c8a408c 492 SMART SM00471 298 448 2.6E-9 T 11-10-2018 IPR003607 HD/PDEase domain AL543_15820 9ecf78711aeb3fe133e986917c8a408c 492 SUPERFAMILY SSF158472 232 276 1.83E-5 T 11-10-2018 AL543_15820 9ecf78711aeb3fe133e986917c8a408c 492 Pfam PF01966 HD domain 304 438 1.6E-17 T 11-10-2018 IPR006674 HD domain AL543_15820 9ecf78711aeb3fe133e986917c8a408c 492 Gene3D G3DSA:1.10.3210.10 276 492 6.7E-77 T 11-10-2018 AL543_15820 9ecf78711aeb3fe133e986917c8a408c 492 SMART SM00304 226 278 0.0045 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_17645 8cd9e083c0433eadcd8129570d4ec442 448 SUPERFAMILY SSF161070 10 447 3.79E-117 T 11-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 AL543_17645 8cd9e083c0433eadcd8129570d4ec442 448 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 47 66 2.0E-7 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL543_17645 8cd9e083c0433eadcd8129570d4ec442 448 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 18 39 2.0E-7 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL543_17645 8cd9e083c0433eadcd8129570d4ec442 448 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 311 330 2.0E-7 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL543_17645 8cd9e083c0433eadcd8129570d4ec442 448 Pfam PF00209 Sodium:neurotransmitter symporter family 10 125 1.4E-19 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL543_17645 8cd9e083c0433eadcd8129570d4ec442 448 Pfam PF00209 Sodium:neurotransmitter symporter family 149 447 5.6E-27 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL543_16465 aaa5d7148a04bb10764fb01e0b44e0d5 294 Pfam PF12833 Helix-turn-helix domain 209 286 2.1E-17 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL543_16465 aaa5d7148a04bb10764fb01e0b44e0d5 294 SUPERFAMILY SSF51215 37 171 4.58E-12 T 11-10-2018 IPR037923 Transcription regulator HTH-like AL543_16465 aaa5d7148a04bb10764fb01e0b44e0d5 294 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 270 286 1.5E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL543_16465 aaa5d7148a04bb10764fb01e0b44e0d5 294 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 255 270 1.5E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL543_16465 aaa5d7148a04bb10764fb01e0b44e0d5 294 SMART SM00342 203 286 9.2E-23 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL543_16465 aaa5d7148a04bb10764fb01e0b44e0d5 294 Gene3D G3DSA:1.10.10.60 183 294 3.5E-24 T 11-10-2018 AL543_16465 aaa5d7148a04bb10764fb01e0b44e0d5 294 TIGRFAM TIGR02297 HpaA: 4-hydroxyphenylacetate catabolism regulatory protein HpaA 6 287 9.8E-137 T 11-10-2018 IPR011983 4-hydroxyphenylacetate catabolism regulatory protein HpaA AL543_16465 aaa5d7148a04bb10764fb01e0b44e0d5 294 Gene3D G3DSA:2.60.120.10 34 154 8.0E-7 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL543_16465 aaa5d7148a04bb10764fb01e0b44e0d5 294 SUPERFAMILY SSF46689 241 286 3.23E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_16465 aaa5d7148a04bb10764fb01e0b44e0d5 294 Pfam PF02311 AraC-like ligand binding domain 38 161 2.2E-10 T 11-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AL543_03785 43d19f3f4fa0f009b424f145f4749111 583 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 43 139 2.7E-24 T 11-10-2018 IPR029095 NarX-like, N-terminal AL543_03785 43d19f3f4fa0f009b424f145f4749111 583 PIRSF PIRSF003167 3 583 2.2E-179 T 11-10-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 AL543_03785 43d19f3f4fa0f009b424f145f4749111 583 Gene3D G3DSA:3.30.565.10 444 578 3.9E-27 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_03785 43d19f3f4fa0f009b424f145f4749111 583 Gene3D G3DSA:1.20.120.960 49 157 7.1E-12 T 11-10-2018 AL543_03785 43d19f3f4fa0f009b424f145f4749111 583 SUPERFAMILY SSF55874 452 571 2.49E-19 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_03785 43d19f3f4fa0f009b424f145f4749111 583 Pfam PF07730 Histidine kinase 374 443 4.7E-17 T 11-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AL543_03785 43d19f3f4fa0f009b424f145f4749111 583 SUPERFAMILY SSF158472 187 234 1.05E-5 T 11-10-2018 AL543_03785 43d19f3f4fa0f009b424f145f4749111 583 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 485 573 7.9E-13 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_03785 43d19f3f4fa0f009b424f145f4749111 583 SMART SM00304 185 237 1.3E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_03785 43d19f3f4fa0f009b424f145f4749111 583 SMART SM00387 483 576 1.9E-11 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_03785 43d19f3f4fa0f009b424f145f4749111 583 Gene3D G3DSA:1.10.287.130 183 293 3.8E-5 T 11-10-2018 AL543_01040 4810795fd0f8b9c4cae4de969350d020 439 TIGRFAM TIGR04299 antiport_PotE: putrescine-ornithine antiporter 5 429 6.0E-226 T 11-10-2018 IPR027566 Putrescine transporter PotE GO:0015496|GO:0015822|GO:0015847 AL543_01040 4810795fd0f8b9c4cae4de969350d020 439 Pfam PF13520 Amino acid permease 8 403 1.5E-48 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AL543_01040 4810795fd0f8b9c4cae4de969350d020 439 PIRSF PIRSF006060 1 438 1.3E-49 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AL543_01040 4810795fd0f8b9c4cae4de969350d020 439 Hamap MF_02073 Putrescine transporter PotE [potE]. 8 435 35.26 T 11-10-2018 IPR027566 Putrescine transporter PotE GO:0015496|GO:0015822|GO:0015847 AL543_01040 4810795fd0f8b9c4cae4de969350d020 439 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 1 433 4.5E-133 T 11-10-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 AL543_01040 4810795fd0f8b9c4cae4de969350d020 439 Gene3D G3DSA:1.20.1740.10 1 438 1.7E-61 T 11-10-2018 AL543_19015 236328a53e557f3f452df024ce2cacdf 253 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 76 4.6E-22 T 11-10-2018 IPR025161 Putative transposase IS4/IS5 family AL543_19015 236328a53e557f3f452df024ce2cacdf 253 Pfam PF01609 Transposase DDE domain 89 246 5.5E-13 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AL543_17715 e38b949f7ab1544a99d0280fa387b288 255 Pfam PF11150 Protein of unknown function (DUF2927) 28 226 2.3E-64 T 11-10-2018 IPR021323 Protein of unknown function DUF2927 AL543_15945 d3af9ae9e3267e87b68a6e33eec02720 257 Pfam PF06629 MltA-interacting protein MipA 49 257 1.5E-42 T 11-10-2018 IPR010583 MltA-interacting MipA AL543_13640 c9a8a594427fd34460840bdb56771e91 258 Pfam PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) 1 256 1.6E-112 T 11-10-2018 IPR016908 Uncharacterised conserved protein UCP029037 AL543_13640 c9a8a594427fd34460840bdb56771e91 258 PIRSF PIRSF029037 1 258 1.3E-114 T 11-10-2018 IPR016908 Uncharacterised conserved protein UCP029037 AL543_10270 5d28d0149aa85045f29c8128a71b77b8 349 SUPERFAMILY SSF53756 30 335 4.24E-43 T 11-10-2018 AL543_10270 5d28d0149aa85045f29c8128a71b77b8 349 Gene3D G3DSA:3.40.50.2000 184 340 8.4E-17 T 11-10-2018 AL543_10270 5d28d0149aa85045f29c8128a71b77b8 349 Gene3D G3DSA:3.40.50.2000 24 177 4.5E-16 T 11-10-2018 AL543_10270 5d28d0149aa85045f29c8128a71b77b8 349 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 105 327 4.3E-16 T 11-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 AL543_08040 26eab6f147b20b07cba50fe0a8ffb98a 297 Pfam PF03466 LysR substrate binding domain 89 293 7.2E-44 T 11-10-2018 IPR005119 LysR, substrate-binding AL543_08040 26eab6f147b20b07cba50fe0a8ffb98a 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 9.2E-20 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_08040 26eab6f147b20b07cba50fe0a8ffb98a 297 Gene3D G3DSA:3.40.190.10 164 267 2.0E-65 T 11-10-2018 AL543_08040 26eab6f147b20b07cba50fe0a8ffb98a 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.9E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_08040 26eab6f147b20b07cba50fe0a8ffb98a 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.9E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_08040 26eab6f147b20b07cba50fe0a8ffb98a 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.9E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_08040 26eab6f147b20b07cba50fe0a8ffb98a 297 SUPERFAMILY SSF53850 87 295 7.6E-40 T 11-10-2018 AL543_08040 26eab6f147b20b07cba50fe0a8ffb98a 297 Gene3D G3DSA:3.40.190.10 91 281 2.0E-65 T 11-10-2018 AL543_08040 26eab6f147b20b07cba50fe0a8ffb98a 297 SUPERFAMILY SSF46785 1 85 8.82E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_08040 26eab6f147b20b07cba50fe0a8ffb98a 297 Gene3D G3DSA:1.10.10.10 1 85 2.4E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_19610 5a40c3ec588efdc4f896fad034aeb92d 169 Pfam PF10975 Protein of unknown function (DUF2802) 76 142 9.0E-23 T 11-10-2018 IPR021244 Protein of unknown function DUF2802 AL543_17340 2656c7eb2d039f551b362ff4537dc143 77 Pfam PF00462 Glutaredoxin 4 60 1.3E-12 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AL543_17340 2656c7eb2d039f551b362ff4537dc143 77 Gene3D G3DSA:3.40.30.10 2 73 2.2E-15 T 11-10-2018 AL543_17340 2656c7eb2d039f551b362ff4537dc143 77 SUPERFAMILY SSF52833 3 69 1.03E-13 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL543_17340 2656c7eb2d039f551b362ff4537dc143 77 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 11-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 AL543_03875 557e8c379b83aaec5779875fa77538ac 126 SUPERFAMILY SSF54593 1 125 2.55E-18 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL543_03875 557e8c379b83aaec5779875fa77538ac 126 Gene3D G3DSA:3.10.180.10 6 125 2.4E-22 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL543_07135 8cb5b82c4db7c890e37af512434419ff 156 PIRSF PIRSF004923 1 156 2.4E-40 T 11-10-2018 IPR026268 Protein RseC AL543_07135 8cb5b82c4db7c890e37af512434419ff 156 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 14 149 7.5E-34 T 11-10-2018 AL543_16280 24555164780dbdbc95fd53f931fa9634 138 Pfam PF03994 Domain of Unknown Function (DUF350) 83 136 1.7E-12 T 11-10-2018 IPR007140 Protein of unknown function DUF350 AL543_16280 24555164780dbdbc95fd53f931fa9634 138 Pfam PF03994 Domain of Unknown Function (DUF350) 17 70 5.9E-10 T 11-10-2018 IPR007140 Protein of unknown function DUF350 AL543_17185 8faec7f27a072147facdca1f236dd81f 111 PIRSF PIRSF029143 6 110 5.4E-44 T 11-10-2018 IPR008314 Uncharacterised conserved protein UCP029143 AL543_17185 8faec7f27a072147facdca1f236dd81f 111 SUPERFAMILY SSF88697 7 108 4.22E-33 T 11-10-2018 IPR015947 PUA-like superfamily AL543_17185 8faec7f27a072147facdca1f236dd81f 111 Pfam PF04266 ASCH domain 12 105 1.2E-14 T 11-10-2018 IPR007374 ASCH domain AL543_17185 8faec7f27a072147facdca1f236dd81f 111 SMART SM01022 11 109 2.9E-26 T 11-10-2018 IPR007374 ASCH domain AL543_17185 8faec7f27a072147facdca1f236dd81f 111 Hamap MF_00684 UPF0267 protein YqfB [yqfB]. 7 108 29.828 T 11-10-2018 IPR008314 Uncharacterised conserved protein UCP029143 AL543_17185 8faec7f27a072147facdca1f236dd81f 111 Gene3D G3DSA:2.30.130.30 6 108 1.6E-43 T 11-10-2018 AL543_19540 bda9a9e8470f3af2eb186f00c5bd94b2 110 SUPERFAMILY SSF52833 1 104 6.79E-33 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL543_19540 bda9a9e8470f3af2eb186f00c5bd94b2 110 PIRSF PIRSF005894 1 107 3.0E-51 T 11-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 AL543_19540 bda9a9e8470f3af2eb186f00c5bd94b2 110 Gene3D G3DSA:3.40.30.10 2 106 4.7E-30 T 11-10-2018 AL543_19540 bda9a9e8470f3af2eb186f00c5bd94b2 110 Pfam PF00462 Glutaredoxin 16 80 1.4E-15 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AL543_19540 bda9a9e8470f3af2eb186f00c5bd94b2 110 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 2.0E-45 T 11-10-2018 IPR004480 Monothiol glutaredoxin-related AL543_06570 fbf3c32bb60d2e587a1699c6b44835d3 259 SUPERFAMILY SSF51569 6 246 3.77E-82 T 11-10-2018 AL543_06570 fbf3c32bb60d2e587a1699c6b44835d3 259 Pfam PF01791 DeoC/LacD family aldolase 11 240 7.1E-48 T 11-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AL543_06570 fbf3c32bb60d2e587a1699c6b44835d3 259 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 1 259 52.997 T 11-10-2018 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 AL543_06570 fbf3c32bb60d2e587a1699c6b44835d3 259 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 11 231 9.0E-82 T 11-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AL543_06570 fbf3c32bb60d2e587a1699c6b44835d3 259 PIRSF PIRSF001357 5 254 5.4E-77 T 11-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AL543_06570 fbf3c32bb60d2e587a1699c6b44835d3 259 Gene3D G3DSA:3.20.20.70 1 258 7.4E-103 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_06570 fbf3c32bb60d2e587a1699c6b44835d3 259 SMART SM01133 10 245 9.5E-81 T 11-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AL543_13690 cb77820a5823df44f34da50f69c9acad 329 PIRSF PIRSF028696 1 329 4.0E-100 T 11-10-2018 IPR016896 Protein of unknown function DUF2860 AL543_13690 cb77820a5823df44f34da50f69c9acad 329 Pfam PF11059 Protein of unknown function (DUF2860) 29 327 2.1E-83 T 11-10-2018 IPR016896 Protein of unknown function DUF2860 AL543_04955 b9d5a57d67e025729b0cceb1e3241dbb 78 Gene3D G3DSA:3.30.70.330 1 78 1.4E-23 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily AL543_04955 b9d5a57d67e025729b0cceb1e3241dbb 78 SMART SM00360 2 75 4.9E-22 T 11-10-2018 IPR000504 RNA recognition motif domain GO:0003676 AL543_04955 b9d5a57d67e025729b0cceb1e3241dbb 78 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 72 1.6E-19 T 11-10-2018 IPR000504 RNA recognition motif domain GO:0003676 AL543_04955 b9d5a57d67e025729b0cceb1e3241dbb 78 SUPERFAMILY SSF54928 2 77 6.72E-24 T 11-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 AL543_19235 4c46a501a5c2ee71e670687fd638d7fa 616 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 327 539 1.5E-53 T 11-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 AL543_19235 4c46a501a5c2ee71e670687fd638d7fa 616 Gene3D G3DSA:3.40.1750.10 186 497 4.1E-162 T 11-10-2018 AL543_19235 4c46a501a5c2ee71e670687fd638d7fa 616 SUPERFAMILY SSF52096 320 529 4.97E-43 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AL543_19235 4c46a501a5c2ee71e670687fd638d7fa 616 Pfam PF01343 Peptidase family S49 138 294 7.9E-32 T 11-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AL543_19235 4c46a501a5c2ee71e670687fd638d7fa 616 Pfam PF01343 Peptidase family S49 391 541 1.4E-45 T 11-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AL543_19235 4c46a501a5c2ee71e670687fd638d7fa 616 Gene3D G3DSA:3.90.226.10 94 314 4.1E-162 T 11-10-2018 AL543_19235 4c46a501a5c2ee71e670687fd638d7fa 616 Gene3D G3DSA:3.90.226.10 315 539 4.1E-162 T 11-10-2018 AL543_19235 4c46a501a5c2ee71e670687fd638d7fa 616 SUPERFAMILY SSF52096 37 284 2.4E-28 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AL543_19235 4c46a501a5c2ee71e670687fd638d7fa 616 PIRSF PIRSF001217 8 616 5.4E-224 T 11-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 AL543_19235 4c46a501a5c2ee71e670687fd638d7fa 616 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 608 8.7E-191 T 11-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 AL543_17155 a60aa8b722db91c77fb0a0da78d97f6a 122 Pfam PF01521 Iron-sulphur cluster biosynthesis 21 117 7.1E-12 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AL543_17155 a60aa8b722db91c77fb0a0da78d97f6a 122 Gene3D G3DSA:2.60.300.12 20 122 6.0E-25 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AL543_17155 a60aa8b722db91c77fb0a0da78d97f6a 122 SUPERFAMILY SSF89360 21 111 6.08E-19 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AL543_17155 a60aa8b722db91c77fb0a0da78d97f6a 122 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 103 120 - T 11-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 AL543_17155 a60aa8b722db91c77fb0a0da78d97f6a 122 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 21 121 2.5E-24 T 11-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 AL543_05400 778b44cb490241957e37effef1793e95 81 Pfam PF07362 Post-segregation antitoxin CcdA 11 81 3.1E-29 T 11-10-2018 IPR009956 Post-segregation antitoxin CcdA AL543_05605 2ec40aa0eff439c4bf3e5ac071be7de5 164 Gene3D G3DSA:3.40.630.30 1 156 1.7E-36 T 11-10-2018 AL543_05605 2ec40aa0eff439c4bf3e5ac071be7de5 164 Pfam PF13302 Acetyltransferase (GNAT) domain 6 145 1.1E-26 T 11-10-2018 IPR000182 GNAT domain AL543_05605 2ec40aa0eff439c4bf3e5ac071be7de5 164 SUPERFAMILY SSF55729 1 148 4.33E-34 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL543_19590 9c9dacf4cc28192151d8bca81c619c90 68 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 10 56 3.0E-16 T 11-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 AL543_19590 9c9dacf4cc28192151d8bca81c619c90 68 Pfam PF04995 Heme exporter protein D (CcmD) 13 55 1.7E-15 T 11-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 AL543_13910 50acee8832a1fec39bdb8e16ff7d84b3 204 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 9 166 26.036 T 11-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 AL543_13910 50acee8832a1fec39bdb8e16ff7d84b3 204 Gene3D G3DSA:3.30.160.150 21 170 1.4E-47 T 11-10-2018 AL543_13910 50acee8832a1fec39bdb8e16ff7d84b3 204 Pfam PF04390 Lipopolysaccharide-assembly 49 161 3.3E-9 T 11-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 AL543_07450 d0918ca251a9a70ba9b5411f10af65cf 84 Gene3D G3DSA:3.30.300.90 1 84 1.7E-31 T 11-10-2018 AL543_07450 d0918ca251a9a70ba9b5411f10af65cf 84 Pfam PF01722 BolA-like protein 20 74 5.0E-12 T 11-10-2018 IPR002634 BolA protein AL543_07450 d0918ca251a9a70ba9b5411f10af65cf 84 PIRSF PIRSF003113 1 83 9.3E-21 T 11-10-2018 IPR002634 BolA protein AL543_07450 d0918ca251a9a70ba9b5411f10af65cf 84 SUPERFAMILY SSF82657 4 82 7.98E-28 T 11-10-2018 IPR036065 BolA-like superfamily AL543_06735 00304ada6b126ba8a32c5516369a12b9 379 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 48.907 T 11-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL543_06735 00304ada6b126ba8a32c5516369a12b9 379 SUPERFAMILY SSF52021 4 142 5.36E-58 T 11-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL543_06735 00304ada6b126ba8a32c5516369a12b9 379 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 375 4.9E-149 T 11-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL543_06735 00304ada6b126ba8a32c5516369a12b9 379 Pfam PF00117 Glutamine amidotransferase class-I 197 372 5.4E-48 T 11-10-2018 IPR017926 Glutamine amidotransferase AL543_06735 00304ada6b126ba8a32c5516369a12b9 379 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 3.9E-53 T 11-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL543_06735 00304ada6b126ba8a32c5516369a12b9 379 Gene3D G3DSA:3.40.50.880 152 379 7.3E-76 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL543_06735 00304ada6b126ba8a32c5516369a12b9 379 Gene3D G3DSA:3.50.30.20 2 151 1.9E-62 T 11-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL543_06735 00304ada6b126ba8a32c5516369a12b9 379 PRINTS PR00097 Anthranilate synthase component II signature 349 362 1.5E-5 T 11-10-2018 AL543_06735 00304ada6b126ba8a32c5516369a12b9 379 PRINTS PR00097 Anthranilate synthase component II signature 264 275 1.5E-5 T 11-10-2018 AL543_06735 00304ada6b126ba8a32c5516369a12b9 379 PRINTS PR00097 Anthranilate synthase component II signature 236 245 1.5E-5 T 11-10-2018 AL543_06735 00304ada6b126ba8a32c5516369a12b9 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 4.8E-11 T 11-10-2018 AL543_06735 00304ada6b126ba8a32c5516369a12b9 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 4.8E-11 T 11-10-2018 AL543_06735 00304ada6b126ba8a32c5516369a12b9 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 4.8E-11 T 11-10-2018 AL543_06735 00304ada6b126ba8a32c5516369a12b9 379 SUPERFAMILY SSF52317 153 377 3.06E-64 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL543_06735 00304ada6b126ba8a32c5516369a12b9 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 6.8E-40 T 11-10-2018 AL543_06735 00304ada6b126ba8a32c5516369a12b9 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 6.8E-40 T 11-10-2018 AL543_06735 00304ada6b126ba8a32c5516369a12b9 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 6.8E-40 T 11-10-2018 AL543_06735 00304ada6b126ba8a32c5516369a12b9 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 6.8E-40 T 11-10-2018 AL543_06735 00304ada6b126ba8a32c5516369a12b9 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 6.8E-40 T 11-10-2018 AL543_06735 00304ada6b126ba8a32c5516369a12b9 379 SMART SM01097 3 133 9.3E-94 T 11-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL543_10215 cf60303a873b9cd67191608bf39aabbd 345 Gene3D G3DSA:3.40.50.2000 1 145 8.4E-28 T 11-10-2018 AL543_10215 cf60303a873b9cd67191608bf39aabbd 345 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 70 309 1.2E-18 T 11-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 AL543_10215 cf60303a873b9cd67191608bf39aabbd 345 SUPERFAMILY SSF53756 2 341 1.57E-69 T 11-10-2018 AL543_10215 cf60303a873b9cd67191608bf39aabbd 345 Gene3D G3DSA:3.40.50.2000 166 342 1.5E-20 T 11-10-2018 AL543_09645 69ad364645c981d136eaa9c69b5c99ba 318 Gene3D G3DSA:3.40.190.10 172 271 6.4E-65 T 11-10-2018 AL543_09645 69ad364645c981d136eaa9c69b5c99ba 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 2.7E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_09645 69ad364645c981d136eaa9c69b5c99ba 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 2.7E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_09645 69ad364645c981d136eaa9c69b5c99ba 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 2.7E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_09645 69ad364645c981d136eaa9c69b5c99ba 318 Gene3D G3DSA:1.10.10.10 3 91 1.3E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_09645 69ad364645c981d136eaa9c69b5c99ba 318 SUPERFAMILY SSF53850 92 298 2.53E-39 T 11-10-2018 AL543_09645 69ad364645c981d136eaa9c69b5c99ba 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 4.5E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_09645 69ad364645c981d136eaa9c69b5c99ba 318 Pfam PF03466 LysR substrate binding domain 99 299 9.5E-23 T 11-10-2018 IPR005119 LysR, substrate-binding AL543_09645 69ad364645c981d136eaa9c69b5c99ba 318 Gene3D G3DSA:3.40.190.10 94 295 6.4E-65 T 11-10-2018 AL543_09645 69ad364645c981d136eaa9c69b5c99ba 318 SUPERFAMILY SSF46785 7 88 2.52E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_02065 484d69052970f7db15b6c4c4f954ace4 94 Gene3D G3DSA:2.60.200.60 2 94 2.2E-42 T 11-10-2018 AL543_02065 484d69052970f7db15b6c4c4f954ace4 94 Pfam PF05488 PAAR motif 19 85 3.1E-19 T 11-10-2018 IPR008727 PAAR motif AL543_14255 7b1044adb515029b4912a9bc77344e2d 81 SUPERFAMILY SSF54285 1 81 3.74E-23 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AL543_14255 7b1044adb515029b4912a9bc77344e2d 81 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 81 1.4E-22 T 11-10-2018 AL543_14255 7b1044adb515029b4912a9bc77344e2d 81 Pfam PF02597 ThiS family 4 81 1.1E-23 T 11-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 AL543_14255 7b1044adb515029b4912a9bc77344e2d 81 Gene3D G3DSA:3.10.20.30 1 81 5.4E-26 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AL543_01615 35bf8ad6c938016659800fcd59425214 155 Pfam PF00174 Oxidoreductase molybdopterin binding domain 49 117 6.0E-6 T 11-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AL543_01615 35bf8ad6c938016659800fcd59425214 155 SUPERFAMILY SSF56524 23 153 9.55E-16 T 11-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 AL543_03420 eea941e319d141b02fd68cd845f119a3 487 SUPERFAMILY SSF52540 6 241 1.46E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_03420 eea941e319d141b02fd68cd845f119a3 487 SUPERFAMILY SSF52317 194 410 2.14E-36 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL543_03420 eea941e319d141b02fd68cd845f119a3 487 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 254 439 4.8E-57 T 11-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 AL543_03420 eea941e319d141b02fd68cd845f119a3 487 Gene3D G3DSA:3.40.50.300 3 250 9.3E-57 T 11-10-2018 AL543_03420 eea941e319d141b02fd68cd845f119a3 487 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 8 233 1.2E-21 T 11-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AL543_03420 eea941e319d141b02fd68cd845f119a3 487 Gene3D G3DSA:3.40.50.880 255 408 2.6E-17 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL543_03420 eea941e319d141b02fd68cd845f119a3 487 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 487 200.452 T 11-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 AL543_03420 eea941e319d141b02fd68cd845f119a3 487 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 8 483 1.6E-157 T 11-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 AL543_15135 a8136e73fc0e0dc9dcbb079852922509 242 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 4 242 1.6E-118 T 11-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 AL543_15135 a8136e73fc0e0dc9dcbb079852922509 242 Pfam PF13649 Methyltransferase domain 60 158 3.6E-13 T 11-10-2018 AL543_15135 a8136e73fc0e0dc9dcbb079852922509 242 Gene3D G3DSA:3.40.50.150 18 242 8.2E-64 T 11-10-2018 AL543_15135 a8136e73fc0e0dc9dcbb079852922509 242 SUPERFAMILY SSF53335 20 242 6.81E-41 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL543_15135 a8136e73fc0e0dc9dcbb079852922509 242 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 3 242 43.145 T 11-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 AL543_15135 a8136e73fc0e0dc9dcbb079852922509 242 PIRSF PIRSF006325 1 242 2.4E-128 T 11-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 AL543_07005 52670b96519f8c1f07327149778b18a4 228 TIGRFAM TIGR00153 TIGR00153: TIGR00153 family protein 6 227 1.3E-68 T 11-10-2018 IPR002727 Protein of unknown function DUF47 AL543_07005 52670b96519f8c1f07327149778b18a4 228 Pfam PF01865 Protein of unknown function DUF47 9 225 6.8E-66 T 11-10-2018 IPR018445 Putative phosphate transport regulator AL543_07005 52670b96519f8c1f07327149778b18a4 228 Gene3D G3DSA:1.20.58.220 2 227 1.9E-63 T 11-10-2018 IPR038078 PhoU-like domain superfamily AL543_07005 52670b96519f8c1f07327149778b18a4 228 SUPERFAMILY SSF109755 33 218 1.92E-15 T 11-10-2018 AL543_00760 29cb52ff1f268553855d3c3e8ebf9c3e 426 Pfam PF07690 Major Facilitator Superfamily 33 365 3.4E-39 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL543_00760 29cb52ff1f268553855d3c3e8ebf9c3e 426 SUPERFAMILY SSF103473 24 414 4.32E-55 T 11-10-2018 IPR036259 MFS transporter superfamily AL543_00760 29cb52ff1f268553855d3c3e8ebf9c3e 426 Gene3D G3DSA:1.20.1250.20 26 419 2.3E-47 T 11-10-2018 AL543_00760 29cb52ff1f268553855d3c3e8ebf9c3e 426 ProSitePatterns PS00216 Sugar transport proteins signature 1. 83 100 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AL543_08785 90eab03296ad575873aeaf8d2c236cdf 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 326 1.6E-58 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL543_08785 90eab03296ad575873aeaf8d2c236cdf 466 Gene3D G3DSA:3.50.50.60 158 276 3.0E-93 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_08785 90eab03296ad575873aeaf8d2c236cdf 466 PIRSF PIRSF000350 1 463 7.8E-70 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 AL543_08785 90eab03296ad575873aeaf8d2c236cdf 466 SUPERFAMILY SSF55424 345 463 2.06E-30 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AL543_08785 90eab03296ad575873aeaf8d2c236cdf 466 Gene3D G3DSA:3.30.390.30 345 464 1.8E-32 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AL543_08785 90eab03296ad575873aeaf8d2c236cdf 466 Gene3D G3DSA:3.50.50.60 7 333 3.0E-93 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_08785 90eab03296ad575873aeaf8d2c236cdf 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 457 1.5E-29 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AL543_08785 90eab03296ad575873aeaf8d2c236cdf 466 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 2 466 65.11 T 11-10-2018 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 AL543_08785 90eab03296ad575873aeaf8d2c236cdf 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 2.8E-49 T 11-10-2018 AL543_08785 90eab03296ad575873aeaf8d2c236cdf 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 2.8E-49 T 11-10-2018 AL543_08785 90eab03296ad575873aeaf8d2c236cdf 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 2.8E-49 T 11-10-2018 AL543_08785 90eab03296ad575873aeaf8d2c236cdf 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 2.8E-49 T 11-10-2018 AL543_08785 90eab03296ad575873aeaf8d2c236cdf 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 2.8E-49 T 11-10-2018 AL543_08785 90eab03296ad575873aeaf8d2c236cdf 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 2.8E-49 T 11-10-2018 AL543_08785 90eab03296ad575873aeaf8d2c236cdf 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 2.8E-49 T 11-10-2018 AL543_08785 90eab03296ad575873aeaf8d2c236cdf 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 2.8E-49 T 11-10-2018 AL543_08785 90eab03296ad575873aeaf8d2c236cdf 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 2.8E-49 T 11-10-2018 AL543_08785 90eab03296ad575873aeaf8d2c236cdf 466 SUPERFAMILY SSF51905 1 319 5.26E-54 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_08785 90eab03296ad575873aeaf8d2c236cdf 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 3.4E-27 T 11-10-2018 AL543_08785 90eab03296ad575873aeaf8d2c236cdf 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 3.4E-27 T 11-10-2018 AL543_08785 90eab03296ad575873aeaf8d2c236cdf 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 3.4E-27 T 11-10-2018 AL543_08785 90eab03296ad575873aeaf8d2c236cdf 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 3.4E-27 T 11-10-2018 AL543_08785 90eab03296ad575873aeaf8d2c236cdf 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 3.4E-27 T 11-10-2018 AL543_12090 60b2f8c1402f344847801774bac9d4e2 167 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AL543_12090 60b2f8c1402f344847801774bac9d4e2 167 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 9.0E-47 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AL543_12090 60b2f8c1402f344847801774bac9d4e2 167 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 3.4E-38 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AL543_12090 60b2f8c1402f344847801774bac9d4e2 167 SUPERFAMILY SSF55083 1 159 2.09E-55 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AL543_12090 60b2f8c1402f344847801774bac9d4e2 167 Gene3D G3DSA:3.30.70.560 1 159 3.9E-59 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AL543_08070 f544574f284ad758c5751839467fedcb 262 PIRSF PIRSF000728 1 261 6.8E-70 T 11-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL543_08070 f544574f284ad758c5751839467fedcb 262 SUPERFAMILY SSF53633 9 262 1.44E-58 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AL543_08070 f544574f284ad758c5751839467fedcb 262 Hamap MF_00082 Acetylglutamate kinase [argB]. 6 255 43.122 T 11-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL543_08070 f544574f284ad758c5751839467fedcb 262 Gene3D G3DSA:3.40.1160.10 5 260 9.0E-66 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AL543_08070 f544574f284ad758c5751839467fedcb 262 TIGRFAM TIGR00761 argB: acetylglutamate kinase 9 234 1.9E-64 T 11-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL543_08070 f544574f284ad758c5751839467fedcb 262 Pfam PF00696 Amino acid kinase family 9 238 6.6E-35 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AL543_10520 7dea0d0c392f52f8b11614fd559b56a2 396 SUPERFAMILY SSF103473 9 374 2.09E-37 T 11-10-2018 IPR036259 MFS transporter superfamily AL543_10520 7dea0d0c392f52f8b11614fd559b56a2 396 PIRSF PIRSF004925 3 389 3.2E-102 T 11-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter AL543_10520 7dea0d0c392f52f8b11614fd559b56a2 396 Gene3D G3DSA:1.20.1250.20 196 382 1.8E-32 T 11-10-2018 AL543_10520 7dea0d0c392f52f8b11614fd559b56a2 396 Gene3D G3DSA:1.20.1250.20 5 193 2.9E-18 T 11-10-2018 AL543_10520 7dea0d0c392f52f8b11614fd559b56a2 396 Pfam PF12832 MFS_1 like family 13 361 4.9E-41 T 11-10-2018 IPR024989 Major facilitator superfamily associated domain AL543_02110 285e8ab819a00f49e4cae3bf740e3dca 444 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 442 5.8E-155 T 11-10-2018 IPR010263 Type VI secretion protein, VC_A0114 AL543_02110 285e8ab819a00f49e4cae3bf740e3dca 444 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 443 5.0E-154 T 11-10-2018 IPR010263 Type VI secretion protein, VC_A0114 AL543_08945 9639385df6fb3bcfb2faf56a9ee7252f 398 Pfam PF07219 HemY protein N-terminus 26 132 1.1E-26 T 11-10-2018 IPR010817 HemY, N-terminal AL543_08945 9639385df6fb3bcfb2faf56a9ee7252f 398 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 2 386 1.7E-128 T 11-10-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 AL543_08945 9639385df6fb3bcfb2faf56a9ee7252f 398 SUPERFAMILY SSF48452 85 211 1.01E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_08945 9639385df6fb3bcfb2faf56a9ee7252f 398 SUPERFAMILY SSF48452 157 390 3.8E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_08945 9639385df6fb3bcfb2faf56a9ee7252f 398 Gene3D G3DSA:1.25.40.10 308 397 1.8E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_08945 9639385df6fb3bcfb2faf56a9ee7252f 398 Gene3D G3DSA:1.25.40.10 86 256 7.4E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_02380 363bc344abbcf9d7929fd320b5a2c130 638 Gene3D G3DSA:3.40.50.410 82 284 1.5E-26 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AL543_02380 363bc344abbcf9d7929fd320b5a2c130 638 Pfam PF13519 von Willebrand factor type A domain 88 194 1.3E-14 T 11-10-2018 IPR002035 von Willebrand factor, type A AL543_02380 363bc344abbcf9d7929fd320b5a2c130 638 SMART SM00028 397 430 5.2E-5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL543_02380 363bc344abbcf9d7929fd320b5a2c130 638 SUPERFAMILY SSF48452 372 448 1.05E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_02380 363bc344abbcf9d7929fd320b5a2c130 638 Gene3D G3DSA:1.25.40.10 346 496 1.1E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_02380 363bc344abbcf9d7929fd320b5a2c130 638 SUPERFAMILY SSF53300 88 255 8.9E-15 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AL543_02380 363bc344abbcf9d7929fd320b5a2c130 638 Pfam PF14559 Tetratricopeptide repeat 379 437 1.6E-7 T 11-10-2018 AL543_12395 a9860ecde3c04b4fdca3dc739f6cc25a 175 PIRSF PIRSF025550 1 174 6.6E-85 T 11-10-2018 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT AL543_12395 a9860ecde3c04b4fdca3dc739f6cc25a 175 SUPERFAMILY SSF55718 42 139 2.59E-20 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily AL543_12395 a9860ecde3c04b4fdca3dc739f6cc25a 175 Pfam PF02036 SCP-2 sterol transfer family 45 134 1.5E-18 T 11-10-2018 IPR003033 SCP2 sterol-binding domain AL543_12395 a9860ecde3c04b4fdca3dc739f6cc25a 175 Gene3D G3DSA:3.30.1050.10 24 139 2.9E-6 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily AL543_03955 d15e0571b51adec8be415efeabb57835 116 ProDom PD028709 MEMBRANE INNER YDGC GLPM ALGINATE BIOSYNTHESIS TRANSMEMBRANE REQUIRED FOR UNCHARACTERIZED 22 112 2.0E-34 T 11-10-2018 IPR009707 Membrane protein GlpM/YdgC AL543_03955 d15e0571b51adec8be415efeabb57835 116 Pfam PF06942 GlpM protein 6 112 1.1E-49 T 11-10-2018 IPR009707 Membrane protein GlpM/YdgC AL543_06135 4a30c738c56236e21263d512004a0e5f 280 Pfam PF00889 Elongation factor TS 70 260 5.7E-61 T 11-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 AL543_06135 4a30c738c56236e21263d512004a0e5f 280 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 279 5.6E-104 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL543_06135 4a30c738c56236e21263d512004a0e5f 280 Gene3D G3DSA:1.10.8.10 1 55 5.2E-26 T 11-10-2018 AL543_06135 4a30c738c56236e21263d512004a0e5f 280 ProSitePatterns PS01127 Elongation factor Ts signature 2. 74 84 - T 11-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL543_06135 4a30c738c56236e21263d512004a0e5f 280 SUPERFAMILY SSF54713 141 277 2.49E-45 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 AL543_06135 4a30c738c56236e21263d512004a0e5f 280 SUPERFAMILY SSF54713 55 137 6.21E-19 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 AL543_06135 4a30c738c56236e21263d512004a0e5f 280 SUPERFAMILY SSF46934 3 53 1.53E-18 T 11-10-2018 IPR009060 UBA-like superfamily GO:0005515 AL543_06135 4a30c738c56236e21263d512004a0e5f 280 Gene3D G3DSA:1.10.286.20 184 223 8.5E-23 T 11-10-2018 AL543_06135 4a30c738c56236e21263d512004a0e5f 280 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 11-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL543_06135 4a30c738c56236e21263d512004a0e5f 280 Gene3D G3DSA:3.30.479.20 56 139 2.6E-26 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 AL543_06135 4a30c738c56236e21263d512004a0e5f 280 Hamap MF_00050 Elongation factor Ts [tsf]. 1 279 75.941 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL543_15120 a90fa4d27cb6c73a4841cba47e9f248e 502 Pfam PF14400 Inactive transglutaminase fused to 7 transmembrane helices 25 183 3.8E-56 T 11-10-2018 IPR025838 Inactive transglutaminase fused to 7 transmembrane helices AL543_15120 a90fa4d27cb6c73a4841cba47e9f248e 502 Pfam PF14402 7 transmembrane helices usually fused to an inactive transglutaminase 255 498 5.3E-107 T 11-10-2018 IPR025840 7 transmembrane helices usually fused to an inactive transglutaminase AL543_00425 3fa22faa7b955145f6e89b22d6a385b5 167 PIRSF PIRSF030840 1 167 1.8E-61 T 11-10-2018 IPR010413 Heme utilization carrier protein HutX-like AL543_00425 3fa22faa7b955145f6e89b22d6a385b5 167 SUPERFAMILY SSF144064 1 164 1.96E-58 T 11-10-2018 AL543_00425 3fa22faa7b955145f6e89b22d6a385b5 167 Pfam PF06228 Haem utilisation ChuX/HutX 24 161 1.1E-34 T 11-10-2018 IPR010413 Heme utilization carrier protein HutX-like AL543_00425 3fa22faa7b955145f6e89b22d6a385b5 167 TIGRFAM TIGR04108 HutX: putative heme utilization carrier protein HutX 8 161 1.4E-64 T 11-10-2018 IPR010413 Heme utilization carrier protein HutX-like AL543_00425 3fa22faa7b955145f6e89b22d6a385b5 167 Gene3D G3DSA:3.40.1570.10 1 167 2.6E-65 T 11-10-2018 AL543_02545 52bbb947b352c3b279d86fd493e731ec 214 Gene3D G3DSA:2.10.109.10 97 214 2.2E-20 T 11-10-2018 AL543_02545 52bbb947b352c3b279d86fd493e731ec 214 Pfam PF07022 Bacteriophage CI repressor helix-turn-helix domain 18 78 6.5E-11 T 11-10-2018 IPR010744 Bacteriophage CI repressor GO:0003677|GO:0045892 AL543_02545 52bbb947b352c3b279d86fd493e731ec 214 Pfam PF16452 Bacteriophage CI repressor C-terminal domain 108 208 8.2E-23 T 11-10-2018 IPR032499 Bacteriophage CI repressor, C-terminal GO:0051259 AL543_02545 52bbb947b352c3b279d86fd493e731ec 214 Gene3D G3DSA:1.10.260.40 12 80 2.1E-8 T 11-10-2018 AL543_16715 892d50cdbeb6271fd54d248d20c80877 80 Pfam PF05768 Glutaredoxin-like domain (DUF836) 2 72 3.0E-20 T 11-10-2018 IPR008554 Glutaredoxin-like AL543_16715 892d50cdbeb6271fd54d248d20c80877 80 SUPERFAMILY SSF52833 1 74 1.05E-14 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL543_16715 892d50cdbeb6271fd54d248d20c80877 80 Gene3D G3DSA:3.40.30.10 1 80 3.4E-21 T 11-10-2018 AL543_04780 cf601d1e1474ded93c4f8bfe06406499 88 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 6 81 5.5E-23 T 11-10-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system AL543_04780 cf601d1e1474ded93c4f8bfe06406499 88 Gene3D G3DSA:3.10.450.530 1 84 4.4E-15 T 11-10-2018 IPR038573 Ribonuclease toxin BrnT superfamily AL543_16105 906b2e01b3a1960b0558b73dae81b69c 157 Pfam PF08534 Redoxin 5 154 1.1E-39 T 11-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AL543_16105 906b2e01b3a1960b0558b73dae81b69c 157 Gene3D G3DSA:3.40.30.10 2 157 1.2E-59 T 11-10-2018 AL543_16105 906b2e01b3a1960b0558b73dae81b69c 157 SUPERFAMILY SSF52833 1 156 9.23E-37 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL543_03735 94d46ad5d28f1aaef838d88fded9067b 436 PIRSF PIRSF002808 4 436 2.3E-125 T 11-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 AL543_03735 94d46ad5d28f1aaef838d88fded9067b 436 Gene3D G3DSA:1.20.1250.20 234 431 1.8E-43 T 11-10-2018 AL543_03735 94d46ad5d28f1aaef838d88fded9067b 436 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 31 408 6.8E-123 T 11-10-2018 AL543_03735 94d46ad5d28f1aaef838d88fded9067b 436 SUPERFAMILY SSF103473 13 433 2.09E-77 T 11-10-2018 IPR036259 MFS transporter superfamily AL543_03735 94d46ad5d28f1aaef838d88fded9067b 436 Pfam PF07690 Major Facilitator Superfamily 32 391 4.6E-48 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL543_03735 94d46ad5d28f1aaef838d88fded9067b 436 Gene3D G3DSA:1.20.1250.20 14 218 6.2E-47 T 11-10-2018 AL543_01405 7101393d2e4dfee95c9f5a8eb018f7a4 128 Pfam PF01124 MAPEG family 4 120 6.6E-25 T 11-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein AL543_01405 7101393d2e4dfee95c9f5a8eb018f7a4 128 Gene3D G3DSA:1.20.120.550 1 127 4.9E-27 T 11-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily AL543_01405 7101393d2e4dfee95c9f5a8eb018f7a4 128 SUPERFAMILY SSF161084 2 124 3.14E-30 T 11-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily AL543_19735 d29de241cb86406bb9f2eedc96948dac 388 PIRSF PIRSF001554 1 388 2.5E-154 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AL543_19735 d29de241cb86406bb9f2eedc96948dac 388 Gene3D G3DSA:3.40.50.261 240 388 3.8E-57 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL543_19735 d29de241cb86406bb9f2eedc96948dac 388 Pfam PF08442 ATP-grasp domain 2 203 5.6E-79 T 11-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AL543_19735 d29de241cb86406bb9f2eedc96948dac 388 SUPERFAMILY SSF56059 1 238 1.6E-78 T 11-10-2018 AL543_19735 d29de241cb86406bb9f2eedc96948dac 388 Gene3D G3DSA:3.30.470.20 1 234 5.3E-92 T 11-10-2018 AL543_19735 d29de241cb86406bb9f2eedc96948dac 388 SUPERFAMILY SSF52210 240 385 2.88E-53 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL543_19735 d29de241cb86406bb9f2eedc96948dac 388 Pfam PF00549 CoA-ligase 262 382 8.2E-25 T 11-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL543_19735 d29de241cb86406bb9f2eedc96948dac 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 11-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL543_19735 d29de241cb86406bb9f2eedc96948dac 388 Gene3D G3DSA:3.30.1490.20 21 104 5.3E-92 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AL543_19735 d29de241cb86406bb9f2eedc96948dac 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 2.0E-172 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AL543_19735 d29de241cb86406bb9f2eedc96948dac 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.146 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AL543_03590 1648148f9f96c7f975ff7b766edd79c5 300 Pfam PF07549 SecD/SecF GG Motif 30 47 7.8E-6 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AL543_03590 1648148f9f96c7f975ff7b766edd79c5 300 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 35 276 1.7E-62 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AL543_03590 1648148f9f96c7f975ff7b766edd79c5 300 SUPERFAMILY SSF82866 109 285 8.5E-33 T 11-10-2018 AL543_03590 1648148f9f96c7f975ff7b766edd79c5 300 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 12 287 21.924 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AL543_03590 1648148f9f96c7f975ff7b766edd79c5 300 Pfam PF02355 Protein export membrane protein 102 283 9.5E-55 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AL543_03590 1648148f9f96c7f975ff7b766edd79c5 300 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 68 274 2.3E-46 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL543_03590 1648148f9f96c7f975ff7b766edd79c5 300 Gene3D G3DSA:1.20.1640.10 92 289 6.4E-10 T 11-10-2018 AL543_03590 1648148f9f96c7f975ff7b766edd79c5 300 PRINTS PR01755 Bacterial translocase SecF protein signature 225 240 5.1E-25 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL543_03590 1648148f9f96c7f975ff7b766edd79c5 300 PRINTS PR01755 Bacterial translocase SecF protein signature 145 159 5.1E-25 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL543_03590 1648148f9f96c7f975ff7b766edd79c5 300 PRINTS PR01755 Bacterial translocase SecF protein signature 34 49 5.1E-25 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL543_03590 1648148f9f96c7f975ff7b766edd79c5 300 PRINTS PR01755 Bacterial translocase SecF protein signature 193 211 5.1E-25 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL543_14605 40699f662fb2c898b2911ab75bbb2987 407 SUPERFAMILY SSF103473 12 403 5.23E-31 T 11-10-2018 IPR036259 MFS transporter superfamily AL543_14605 40699f662fb2c898b2911ab75bbb2987 407 Gene3D G3DSA:1.20.1250.20 210 406 3.3E-13 T 11-10-2018 AL543_14605 40699f662fb2c898b2911ab75bbb2987 407 Gene3D G3DSA:1.20.1250.20 8 202 2.2E-12 T 11-10-2018 AL543_14605 40699f662fb2c898b2911ab75bbb2987 407 Pfam PF07690 Major Facilitator Superfamily 23 342 9.5E-17 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL543_08775 6bc39045d9fea0a09fc5be82bab1fc99 123 Pfam PF07226 Protein of unknown function (DUF1422) 9 119 5.4E-48 T 11-10-2018 IPR009867 Protein of unknown function DUF1422 AL543_08775 6bc39045d9fea0a09fc5be82bab1fc99 123 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 7 116 3.0E-47 T 11-10-2018 IPR009867 Protein of unknown function DUF1422 AL543_13995 5043dc88bf65f3818f000a3c1eb77089 349 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 99 109 3.3E-7 T 11-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 AL543_13995 5043dc88bf65f3818f000a3c1eb77089 349 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 156 167 3.3E-7 T 11-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 AL543_13995 5043dc88bf65f3818f000a3c1eb77089 349 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 341 349 3.3E-7 T 11-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 AL543_13995 5043dc88bf65f3818f000a3c1eb77089 349 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 58 69 3.3E-7 T 11-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 AL543_13995 5043dc88bf65f3818f000a3c1eb77089 349 Gene3D G3DSA:2.40.160.10 37 349 8.4E-37 T 11-10-2018 IPR023614 Porin domain superfamily AL543_13995 5043dc88bf65f3818f000a3c1eb77089 349 Pfam PF13609 Gram-negative porin 12 303 1.6E-30 T 11-10-2018 AL543_13995 5043dc88bf65f3818f000a3c1eb77089 349 PRINTS PR00184 Neisseria sp. porin signature 97 116 3.2E-11 T 11-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 AL543_13995 5043dc88bf65f3818f000a3c1eb77089 349 PRINTS PR00184 Neisseria sp. porin signature 155 172 3.2E-11 T 11-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 AL543_13995 5043dc88bf65f3818f000a3c1eb77089 349 PRINTS PR00184 Neisseria sp. porin signature 338 349 3.2E-11 T 11-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 AL543_13995 5043dc88bf65f3818f000a3c1eb77089 349 PRINTS PR00184 Neisseria sp. porin signature 60 85 3.2E-11 T 11-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 AL543_13995 5043dc88bf65f3818f000a3c1eb77089 349 SUPERFAMILY SSF56935 36 349 1.13E-37 T 11-10-2018 AL543_16435 13ee4ce44b58e883806a60f7eccc9855 259 Gene3D G3DSA:3.90.850.10 37 251 1.2E-77 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AL543_16435 13ee4ce44b58e883806a60f7eccc9855 259 TIGRFAM TIGR02303 HpaG-C-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit 2 248 3.2E-133 T 11-10-2018 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit GO:0008704|GO:0018800|GO:1901023 KEGG: 00350+5.3.3.10+4.1.1.68 AL543_16435 13ee4ce44b58e883806a60f7eccc9855 259 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 48 245 3.5E-60 T 11-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 AL543_16435 13ee4ce44b58e883806a60f7eccc9855 259 SUPERFAMILY SSF56529 37 251 3.79E-74 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AL543_08020 efcca3adb390fc381cbd2a45a03d08d7 196 Pfam PF04350 Pilus assembly protein, PilO 49 189 1.3E-46 T 11-10-2018 IPR007445 Pilus assembly protein, PilO AL543_08020 efcca3adb390fc381cbd2a45a03d08d7 196 PIRSF PIRSF016482 1 196 2.1E-82 T 11-10-2018 IPR007445 Pilus assembly protein, PilO AL543_08020 efcca3adb390fc381cbd2a45a03d08d7 196 Gene3D G3DSA:3.30.70.60 92 196 1.4E-27 T 11-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 AL543_05905 3b5afe90e93199a3243a8508fea8b6e1 210 SUPERFAMILY SSF53335 23 210 8.75E-28 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL543_05905 3b5afe90e93199a3243a8508fea8b6e1 210 Gene3D G3DSA:3.40.50.150 13 196 3.9E-24 T 11-10-2018 AL543_05905 3b5afe90e93199a3243a8508fea8b6e1 210 Pfam PF13489 Methyltransferase domain 53 167 4.7E-13 T 11-10-2018 AL543_06935 6f59c2e766cbf02cfec899e76a992eb4 246 Hamap MF_01092 Cell division protein ZapD [zapD]. 3 245 32.19 T 11-10-2018 IPR009777 Cell division protein ZapD AL543_06935 6f59c2e766cbf02cfec899e76a992eb4 246 Gene3D G3DSA:1.10.3900.10 12 178 2.1E-83 T 11-10-2018 AL543_06935 6f59c2e766cbf02cfec899e76a992eb4 246 Gene3D G3DSA:2.60.440.10 6 245 2.1E-83 T 11-10-2018 IPR027462 Z ring-associated protein D, C-terminal AL543_06935 6f59c2e766cbf02cfec899e76a992eb4 246 SUPERFAMILY SSF160950 1 245 9.55E-93 T 11-10-2018 IPR036268 ZapD domain superfamily AL543_06935 6f59c2e766cbf02cfec899e76a992eb4 246 Pfam PF07072 Cell division protein 18 224 7.2E-76 T 11-10-2018 IPR009777 Cell division protein ZapD AL543_06165 23dae56d756b07d0a2074663a755b529 324 Gene3D G3DSA:3.30.1330.10 1 143 2.5E-43 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AL543_06165 23dae56d756b07d0a2074663a755b529 324 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 3 320 1.7E-105 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 AL543_06165 23dae56d756b07d0a2074663a755b529 324 Pfam PF00586 AIR synthase related protein, N-terminal domain 28 136 1.4E-21 T 11-10-2018 IPR016188 PurM-like, N-terminal domain AL543_06165 23dae56d756b07d0a2074663a755b529 324 Pfam PF02769 AIR synthase related protein, C-terminal domain 149 299 4.7E-10 T 11-10-2018 IPR010918 PurM-like, C-terminal domain AL543_06165 23dae56d756b07d0a2074663a755b529 324 PIRSF PIRSF005303 1 320 3.3E-87 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 AL543_06165 23dae56d756b07d0a2074663a755b529 324 Gene3D G3DSA:3.90.650.10 144 321 9.5E-51 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AL543_06165 23dae56d756b07d0a2074663a755b529 324 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 2 320 27.715 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 AL543_06165 23dae56d756b07d0a2074663a755b529 324 SUPERFAMILY SSF55326 3 137 6.93E-34 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AL543_06165 23dae56d756b07d0a2074663a755b529 324 SUPERFAMILY SSF56042 142 301 1.5E-34 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AL543_17740 984d77c6e0da6c672df300d62573db21 578 Pfam PF02065 Melibiase 168 351 1.3E-17 T 11-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AL543_17740 984d77c6e0da6c672df300d62573db21 578 SUPERFAMILY SSF51445 190 531 1.38E-80 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AL543_17740 984d77c6e0da6c672df300d62573db21 578 Gene3D G3DSA:3.20.20.70 187 494 2.3E-93 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_11285 c13ccc79f34b74ce0bc4071acb3bfabf 421 SMART SM01119 311 408 1.4E-26 T 11-10-2018 IPR026956 D-serine dehydratase-like domain AL543_11285 c13ccc79f34b74ce0bc4071acb3bfabf 421 Gene3D G3DSA:2.40.37.20 35 421 2.6E-131 T 11-10-2018 AL543_11285 c13ccc79f34b74ce0bc4071acb3bfabf 421 Pfam PF14031 Putative serine dehydratase domain 311 406 1.7E-13 T 11-10-2018 IPR026956 D-serine dehydratase-like domain AL543_11285 c13ccc79f34b74ce0bc4071acb3bfabf 421 Pfam PF01168 Alanine racemase, N-terminal domain 48 256 6.8E-17 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL543_11285 c13ccc79f34b74ce0bc4071acb3bfabf 421 Gene3D G3DSA:3.20.20.10 51 281 2.6E-131 T 11-10-2018 IPR029066 PLP-binding barrel AL543_11285 c13ccc79f34b74ce0bc4071acb3bfabf 421 SUPERFAMILY SSF51419 48 282 2.4E-31 T 11-10-2018 IPR029066 PLP-binding barrel AL543_14055 372adc1bd359cafcbe23caf2dfde7505 279 Pfam PF00486 Transcriptional regulatory protein, C terminal 33 107 7.9E-21 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL543_14055 372adc1bd359cafcbe23caf2dfde7505 279 Gene3D G3DSA:1.10.10.10 5 107 4.7E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_14055 372adc1bd359cafcbe23caf2dfde7505 279 SMART SM00862 30 107 1.1E-18 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL543_14055 372adc1bd359cafcbe23caf2dfde7505 279 SUPERFAMILY SSF46894 23 107 8.79E-19 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL543_10550 614816fbd4420c03f53a5993dc78116f 108 SUPERFAMILY SSF52833 3 107 3.93E-38 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL543_10550 614816fbd4420c03f53a5993dc78116f 108 Gene3D G3DSA:3.40.30.10 1 108 2.2E-35 T 11-10-2018 AL543_10550 614816fbd4420c03f53a5993dc78116f 108 Pfam PF00085 Thioredoxin 5 106 1.4E-32 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 AL543_10550 614816fbd4420c03f53a5993dc78116f 108 PIRSF PIRSF000077 2 108 1.5E-42 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AL543_10550 614816fbd4420c03f53a5993dc78116f 108 PRINTS PR00421 Thioredoxin family signature 24 32 3.3E-10 T 11-10-2018 AL543_10550 614816fbd4420c03f53a5993dc78116f 108 PRINTS PR00421 Thioredoxin family signature 72 83 3.3E-10 T 11-10-2018 AL543_10550 614816fbd4420c03f53a5993dc78116f 108 PRINTS PR00421 Thioredoxin family signature 32 41 3.3E-10 T 11-10-2018 AL543_10550 614816fbd4420c03f53a5993dc78116f 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 2.4E-37 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AL543_10550 614816fbd4420c03f53a5993dc78116f 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AL543_07055 71e79066c034f37ff4a44b5cc25964c4 545 Pfam PF06418 CTP synthase N-terminus 5 265 3.2E-125 T 11-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AL543_07055 71e79066c034f37ff4a44b5cc25964c4 545 SUPERFAMILY SSF52317 289 540 1.41E-87 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL543_07055 71e79066c034f37ff4a44b5cc25964c4 545 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 2.0E-259 T 11-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AL543_07055 71e79066c034f37ff4a44b5cc25964c4 545 Gene3D G3DSA:3.40.50.300 1 285 3.0E-134 T 11-10-2018 AL543_07055 71e79066c034f37ff4a44b5cc25964c4 545 Hamap MF_01227 CTP synthase [pyrG]. 3 540 51.226 T 11-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AL543_07055 71e79066c034f37ff4a44b5cc25964c4 545 Pfam PF00117 Glutamine amidotransferase class-I 301 535 1.4E-61 T 11-10-2018 IPR017926 Glutamine amidotransferase AL543_07055 71e79066c034f37ff4a44b5cc25964c4 545 SUPERFAMILY SSF52540 3 269 6.2E-122 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_07055 71e79066c034f37ff4a44b5cc25964c4 545 Gene3D G3DSA:3.40.50.880 286 544 1.3E-104 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL543_02270 aa9e2a85499a3d8aba16d5a8d1c1e0ad 403 Pfam PF01266 FAD dependent oxidoreductase 4 395 5.0E-66 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL543_02270 aa9e2a85499a3d8aba16d5a8d1c1e0ad 403 SUPERFAMILY SSF51905 3 296 3.67E-44 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_04395 df2b2b27c5d616b2fd99af8f64822210 53 Hamap MF_00507 UPF0181 protein YoaH [yoaH]. 1 53 16.645 T 11-10-2018 IPR005371 Uncharacterised protein family UPF0181 AL543_04395 df2b2b27c5d616b2fd99af8f64822210 53 Pfam PF03701 Uncharacterised protein family (UPF0181) 1 49 6.9E-25 T 11-10-2018 IPR005371 Uncharacterised protein family UPF0181 AL543_04395 df2b2b27c5d616b2fd99af8f64822210 53 ProDom PD026807 UPF0181 YOAH YPTB1650 VV20310 VPA0916 VCA0569 YPO1774/Y2534/YP1619 PLU2693 VVA0806 PM0480 1 49 5.0E-18 T 11-10-2018 IPR005371 Uncharacterised protein family UPF0181 AL543_13175 14b9ce8fb5335ef64674b69ae2f69aaf 197 ProSitePatterns PS01114 GPR1/FUN34/yaaH family signature. 7 16 - T 11-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 AL543_13175 14b9ce8fb5335ef64674b69ae2f69aaf 197 Pfam PF01184 GPR1/FUN34/yaaH family 3 182 9.2E-36 T 11-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 AL543_15895 e79bfa74868fc89b8a1026f27b6fa394 191 Gene3D G3DSA:3.40.630.30 12 190 2.0E-45 T 11-10-2018 AL543_15895 e79bfa74868fc89b8a1026f27b6fa394 191 SUPERFAMILY SSF55729 14 185 4.95E-41 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL543_15895 e79bfa74868fc89b8a1026f27b6fa394 191 Pfam PF13302 Acetyltransferase (GNAT) domain 19 160 3.1E-19 T 11-10-2018 IPR000182 GNAT domain AL543_17005 8340cbf9040d904047b65d295c605e0f 458 Pfam PF01618 MotA/TolQ/ExbB proton channel family 313 430 4.1E-30 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AL543_17005 8340cbf9040d904047b65d295c605e0f 458 PIRSF PIRSF037714 1 454 1.4E-159 T 11-10-2018 IPR017270 Putative MotA/TolQ/ExbB family protein AL543_05585 aed3076928032091fdc9417bf162dab8 551 Pfam PF07510 Protein of unknown function (DUF1524) 406 540 2.4E-24 T 11-10-2018 IPR011089 Domain of unknown function DUF1524 AL543_05585 aed3076928032091fdc9417bf162dab8 551 Pfam PF03235 Protein of unknown function DUF262 9 219 3.1E-38 T 11-10-2018 IPR004919 Domain of unknown function DUF262 AL543_14840 4d7c5fb0c7d74b547d21ff05b99e65da 206 Pfam PF02810 SEC-C motif 188 206 2.0E-9 T 11-10-2018 IPR004027 SEC-C motif AL543_14840 4d7c5fb0c7d74b547d21ff05b99e65da 206 Pfam PF03695 Uncharacterised protein family (UPF0149) 19 153 2.1E-7 T 11-10-2018 IPR011978 Uncharacterised protein family UPF0149 AL543_14840 4d7c5fb0c7d74b547d21ff05b99e65da 206 Gene3D G3DSA:3.10.450.50 126 206 6.6E-9 T 11-10-2018 AL543_14840 4d7c5fb0c7d74b547d21ff05b99e65da 206 SUPERFAMILY SSF103642 186 205 6.87E-7 T 11-10-2018 AL543_15505 b1da91dd59d428ba19febd39c04219a4 261 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 12 249 4.6E-34 T 11-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 AL543_15505 b1da91dd59d428ba19febd39c04219a4 261 Pfam PF02654 Cobalamin-5-phosphate synthase 15 249 5.5E-53 T 11-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 AL543_15505 b1da91dd59d428ba19febd39c04219a4 261 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 261 46.365 T 11-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 AL543_16935 051bdcd4edb973b5b4f7de1900a3177f 245 Pfam PF03942 DTW domain 29 215 1.2E-41 T 11-10-2018 IPR005636 DTW AL543_16935 051bdcd4edb973b5b4f7de1900a3177f 245 SMART SM01144 27 221 1.6E-64 T 11-10-2018 IPR005636 DTW AL543_05425 c2f3eece36ac716ad74cd89097cad430 597 SUPERFAMILY SSF52540 1 375 1.03E-23 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_05425 c2f3eece36ac716ad74cd89097cad430 597 Pfam PF13175 AAA ATPase domain 1 369 8.8E-58 T 11-10-2018 AL543_05425 c2f3eece36ac716ad74cd89097cad430 597 Gene3D G3DSA:3.40.50.300 1 386 2.6E-29 T 11-10-2018 AL543_11895 d9edc95291b5d64bfb8019f3ecc059fd 598 SUPERFAMILY SSF51569 1 302 7.14E-90 T 11-10-2018 AL543_11895 d9edc95291b5d64bfb8019f3ecc059fd 598 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 9 593 5.6E-270 T 11-10-2018 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 AL543_11895 d9edc95291b5d64bfb8019f3ecc059fd 598 Gene3D G3DSA:3.20.20.70 1 465 3.7E-175 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_11895 d9edc95291b5d64bfb8019f3ecc059fd 598 Pfam PF00682 HMGL-like 8 272 4.7E-60 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AL543_11895 d9edc95291b5d64bfb8019f3ecc059fd 598 SUPERFAMILY SSF89000 299 459 2.9E-50 T 11-10-2018 AL543_11895 d9edc95291b5d64bfb8019f3ecc059fd 598 SUPERFAMILY SSF51230 522 597 8.38E-21 T 11-10-2018 IPR011053 Single hybrid motif AL543_11895 d9edc95291b5d64bfb8019f3ecc059fd 598 Pfam PF00364 Biotin-requiring enzyme 532 596 7.9E-17 T 11-10-2018 IPR000089 Biotin/lipoyl attachment AL543_11895 d9edc95291b5d64bfb8019f3ecc059fd 598 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 554 571 - T 11-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AL543_11895 d9edc95291b5d64bfb8019f3ecc059fd 598 Pfam PF02436 Conserved carboxylase domain 294 497 8.5E-59 T 11-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 AL543_11895 d9edc95291b5d64bfb8019f3ecc059fd 598 Gene3D G3DSA:2.40.50.100 531 597 1.2E-22 T 11-10-2018 AL543_07765 e2fa128cc17694ea2a1ebda4dc76d4e2 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 1.0E-42 T 11-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_07765 e2fa128cc17694ea2a1ebda4dc76d4e2 117 Gene3D G3DSA:3.30.420.100 1 117 4.4E-43 T 11-10-2018 AL543_07765 e2fa128cc17694ea2a1ebda4dc76d4e2 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 25.505 T 11-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_07765 e2fa128cc17694ea2a1ebda4dc76d4e2 117 SUPERFAMILY SSF53137 3 115 7.41E-51 T 11-10-2018 AL543_07765 e2fa128cc17694ea2a1ebda4dc76d4e2 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 1.3E-43 T 11-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_07875 8a2aabb994fc039a0d212637d8893e8f 432 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 425 8.0E-196 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AL543_07875 8a2aabb994fc039a0d212637d8893e8f 432 Pfam PF00709 Adenylosuccinate synthetase 5 424 1.3E-182 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AL543_07875 8a2aabb994fc039a0d212637d8893e8f 432 SUPERFAMILY SSF52540 3 430 5.52E-184 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_07875 8a2aabb994fc039a0d212637d8893e8f 432 Gene3D G3DSA:3.90.170.10 267 432 2.2E-70 T 11-10-2018 AL543_07875 8a2aabb994fc039a0d212637d8893e8f 432 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 11-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AL543_07875 8a2aabb994fc039a0d212637d8893e8f 432 SMART SM00788 4 425 0.0 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AL543_07875 8a2aabb994fc039a0d212637d8893e8f 432 Gene3D G3DSA:3.40.440.10 6 249 2.7E-106 T 11-10-2018 AL543_07875 8a2aabb994fc039a0d212637d8893e8f 432 Gene3D G3DSA:1.10.300.10 102 201 2.7E-106 T 11-10-2018 AL543_07875 8a2aabb994fc039a0d212637d8893e8f 432 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 432 221.876 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AL543_07875 8a2aabb994fc039a0d212637d8893e8f 432 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 11-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AL543_02850 126d6083d2833656e71e18db42ffbb9e 355 Gene3D G3DSA:1.10.10.60 243 299 3.1E-14 T 11-10-2018 AL543_02850 126d6083d2833656e71e18db42ffbb9e 355 SUPERFAMILY SSF46689 251 300 1.22E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_02850 126d6083d2833656e71e18db42ffbb9e 355 Gene3D G3DSA:1.10.10.60 300 353 2.9E-13 T 11-10-2018 AL543_02850 126d6083d2833656e71e18db42ffbb9e 355 SMART SM00342 266 349 2.3E-27 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL543_02850 126d6083d2833656e71e18db42ffbb9e 355 Pfam PF12833 Helix-turn-helix domain 272 349 1.4E-21 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL543_02850 126d6083d2833656e71e18db42ffbb9e 355 SUPERFAMILY SSF46689 302 349 2.06E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_02850 126d6083d2833656e71e18db42ffbb9e 355 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 303 345 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL543_17275 3222ad016315e15813e3caaad0e5a776 228 SUPERFAMILY SSF52172 3 154 1.12E-33 T 11-10-2018 IPR011006 CheY-like superfamily AL543_17275 3222ad016315e15813e3caaad0e5a776 228 Gene3D G3DSA:3.40.50.12740 3 209 1.4E-28 T 11-10-2018 AL543_17275 3222ad016315e15813e3caaad0e5a776 228 SMART SM00448 3 116 2.5E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_17275 3222ad016315e15813e3caaad0e5a776 228 PIRSF PIRSF006171 1 226 2.4E-82 T 11-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 AL543_17275 3222ad016315e15813e3caaad0e5a776 228 Pfam PF00072 Response regulator receiver domain 5 116 1.1E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_17275 3222ad016315e15813e3caaad0e5a776 228 Pfam PF12431 Transcriptional regulator 133 159 6.3E-8 T 11-10-2018 IPR028141 Transcriptional regulator AL543_19070 ddf026115d1830980ac7772ed0e5a46a 220 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 115 215 6.1E-33 T 11-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 AL543_19070 ddf026115d1830980ac7772ed0e5a46a 220 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 5 218 1.7E-84 T 11-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 AL543_19070 ddf026115d1830980ac7772ed0e5a46a 220 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 4 219 29.21 T 11-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 AL543_19070 ddf026115d1830980ac7772ed0e5a46a 220 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 102 4.7E-36 T 11-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 AL543_19070 ddf026115d1830980ac7772ed0e5a46a 220 Gene3D G3DSA:2.160.20.70 113 220 1.1E-32 T 11-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 AL543_19070 ddf026115d1830980ac7772ed0e5a46a 220 SUPERFAMILY SSF63848 113 218 5.23E-32 T 11-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 AL543_19070 ddf026115d1830980ac7772ed0e5a46a 220 Gene3D G3DSA:3.30.750.120 1 112 1.0E-34 T 11-10-2018 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily AL543_08915 ddccb62eef07bb9b4b3e99c50ded3933 104 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 103 8.9E-43 T 11-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL543_08915 ddccb62eef07bb9b4b3e99c50ded3933 104 Pfam PF01491 Frataxin-like domain 1 100 1.3E-30 T 11-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL543_08915 ddccb62eef07bb9b4b3e99c50ded3933 104 Hamap MF_00142 Iron-sulfur cluster assembly protein CyaY [cyaY]. 1 103 26.738 T 11-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL543_08915 ddccb62eef07bb9b4b3e99c50ded3933 104 SMART SM01219 1 104 5.2E-56 T 11-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL543_08915 ddccb62eef07bb9b4b3e99c50ded3933 104 Gene3D G3DSA:3.30.920.10 1 104 3.9E-39 T 11-10-2018 IPR036524 Frataxin/CyaY superfamily GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL543_08915 ddccb62eef07bb9b4b3e99c50ded3933 104 ProSitePatterns PS01344 Frataxin family signature. 48 62 - T 11-10-2018 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL543_08915 ddccb62eef07bb9b4b3e99c50ded3933 104 SUPERFAMILY SSF55387 1 103 1.62E-39 T 11-10-2018 AL543_04325 aea5dc3854eaac6489dbfbcf3f48a36b 429 Gene3D G3DSA:1.20.1250.20 9 202 6.3E-7 T 11-10-2018 AL543_04325 aea5dc3854eaac6489dbfbcf3f48a36b 429 Gene3D G3DSA:1.20.1250.20 220 414 9.2E-11 T 11-10-2018 AL543_04325 aea5dc3854eaac6489dbfbcf3f48a36b 429 SUPERFAMILY SSF103473 22 409 5.75E-26 T 11-10-2018 IPR036259 MFS transporter superfamily AL543_15220 2fd0278e6d1f247d2a9ef7d23d6d129d 318 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 3.7E-124 T 11-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 AL543_15220 2fd0278e6d1f247d2a9ef7d23d6d129d 318 Gene3D G3DSA:3.50.50.60 10 312 1.4E-128 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_15220 2fd0278e6d1f247d2a9ef7d23d6d129d 318 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 3.2E-49 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL543_15220 2fd0278e6d1f247d2a9ef7d23d6d129d 318 SUPERFAMILY SSF51905 2 313 9.26E-53 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_15220 2fd0278e6d1f247d2a9ef7d23d6d129d 318 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 11-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 AL543_15220 2fd0278e6d1f247d2a9ef7d23d6d129d 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 5.5E-76 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL543_15220 2fd0278e6d1f247d2a9ef7d23d6d129d 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 5.5E-76 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL543_15220 2fd0278e6d1f247d2a9ef7d23d6d129d 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 5.5E-76 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL543_15220 2fd0278e6d1f247d2a9ef7d23d6d129d 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 5.5E-76 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL543_15220 2fd0278e6d1f247d2a9ef7d23d6d129d 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 5.5E-76 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL543_15220 2fd0278e6d1f247d2a9ef7d23d6d129d 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 5.5E-76 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL543_15220 2fd0278e6d1f247d2a9ef7d23d6d129d 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 5.5E-76 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL543_15220 2fd0278e6d1f247d2a9ef7d23d6d129d 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 5.5E-76 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL543_15220 2fd0278e6d1f247d2a9ef7d23d6d129d 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 5.5E-76 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL543_15220 2fd0278e6d1f247d2a9ef7d23d6d129d 318 Gene3D G3DSA:3.50.50.60 118 244 1.4E-128 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_15220 2fd0278e6d1f247d2a9ef7d23d6d129d 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 2.1E-38 T 11-10-2018 AL543_15220 2fd0278e6d1f247d2a9ef7d23d6d129d 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 2.1E-38 T 11-10-2018 AL543_15220 2fd0278e6d1f247d2a9ef7d23d6d129d 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.1E-38 T 11-10-2018 AL543_15220 2fd0278e6d1f247d2a9ef7d23d6d129d 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 2.1E-38 T 11-10-2018 AL543_15220 2fd0278e6d1f247d2a9ef7d23d6d129d 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 2.1E-38 T 11-10-2018 AL543_19600 0258990d45555df7846f8beaafcac1b4 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 29 50 9.1E-70 T 11-10-2018 AL543_19600 0258990d45555df7846f8beaafcac1b4 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 55 72 9.1E-70 T 11-10-2018 AL543_19600 0258990d45555df7846f8beaafcac1b4 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 158 177 9.1E-70 T 11-10-2018 AL543_19600 0258990d45555df7846f8beaafcac1b4 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 195 218 9.1E-70 T 11-10-2018 AL543_19600 0258990d45555df7846f8beaafcac1b4 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 103 121 9.1E-70 T 11-10-2018 AL543_19600 0258990d45555df7846f8beaafcac1b4 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 78 101 9.1E-70 T 11-10-2018 AL543_19600 0258990d45555df7846f8beaafcac1b4 222 PIRSF PIRSF002764 1 222 4.5E-83 T 11-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria AL543_19600 0258990d45555df7846f8beaafcac1b4 222 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 9 218 6.4E-92 T 11-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria AL543_19600 0258990d45555df7846f8beaafcac1b4 222 Pfam PF03379 CcmB protein 6 219 4.1E-89 T 11-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL543_20405 ee7e27092a719b54d66ff3532384cf8f 474 Gene3D G3DSA:3.40.50.620 2 317 2.0E-133 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL543_20405 ee7e27092a719b54d66ff3532384cf8f 474 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL543_20405 ee7e27092a719b54d66ff3532384cf8f 474 Gene3D G3DSA:1.10.10.350 369 473 3.1E-24 T 11-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AL543_20405 ee7e27092a719b54d66ff3532384cf8f 474 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 464 32.294 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AL543_20405 ee7e27092a719b54d66ff3532384cf8f 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 182 192 3.3E-27 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AL543_20405 ee7e27092a719b54d66ff3532384cf8f 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 3.3E-27 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AL543_20405 ee7e27092a719b54d66ff3532384cf8f 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 3.3E-27 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AL543_20405 ee7e27092a719b54d66ff3532384cf8f 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 3.3E-27 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AL543_20405 ee7e27092a719b54d66ff3532384cf8f 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 198 206 3.3E-27 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AL543_20405 ee7e27092a719b54d66ff3532384cf8f 474 SUPERFAMILY SSF48163 302 464 8.63E-47 T 11-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AL543_20405 ee7e27092a719b54d66ff3532384cf8f 474 SUPERFAMILY SSF52374 3 301 2.23E-108 T 11-10-2018 AL543_20405 ee7e27092a719b54d66ff3532384cf8f 474 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 462 4.0E-192 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AL543_20405 ee7e27092a719b54d66ff3532384cf8f 474 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 308 3.4E-115 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 AL543_18665 94a45d9f1abb0e4012b8d7eb061d2764 402 Gene3D G3DSA:3.40.50.150 105 249 7.7E-6 T 11-10-2018 AL543_18665 94a45d9f1abb0e4012b8d7eb061d2764 402 SUPERFAMILY SSF53335 121 209 8.07E-8 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL543_18665 94a45d9f1abb0e4012b8d7eb061d2764 402 Pfam PF13679 Methyltransferase domain 106 230 2.9E-18 T 11-10-2018 IPR025714 Methyltransferase domain AL543_20060 bb6848fe1beb615f69f257f797f5d55b 339 PIRSF PIRSF026343 4 339 4.2E-146 T 11-10-2018 IPR014524 Outer membrane protein assembly factor BamC AL543_20060 bb6848fe1beb615f69f257f797f5d55b 339 Pfam PF06804 NlpB/DapX lipoprotein 35 335 3.4E-103 T 11-10-2018 IPR010653 NlpB/DapX lipoprotein AL543_20060 bb6848fe1beb615f69f257f797f5d55b 339 Gene3D G3DSA:3.30.310.170 220 339 1.4E-41 T 11-10-2018 AL543_20060 bb6848fe1beb615f69f257f797f5d55b 339 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 4 337 36.685 T 11-10-2018 IPR014524 Outer membrane protein assembly factor BamC AL543_20060 bb6848fe1beb615f69f257f797f5d55b 339 Gene3D G3DSA:3.30.530.50 96 205 3.7E-13 T 11-10-2018 AL543_09755 ba3a57f18d19598e4d31f1245e38799f 391 Pfam PF01476 LysM domain 56 102 6.1E-13 T 11-10-2018 IPR018392 LysM domain AL543_09755 ba3a57f18d19598e4d31f1245e38799f 391 SUPERFAMILY SSF54106 54 102 3.66E-7 T 11-10-2018 AL543_09755 ba3a57f18d19598e4d31f1245e38799f 391 Gene3D G3DSA:3.10.350.10 54 101 2.2E-14 T 11-10-2018 IPR036779 LysM domain superfamily AL543_09755 ba3a57f18d19598e4d31f1245e38799f 391 SMART SM00257 55 103 7.8E-7 T 11-10-2018 IPR018392 LysM domain AL543_08485 199988bee2e903ed64724832faace24f 117 SUPERFAMILY SSF54523 37 115 9.42E-24 T 11-10-2018 AL543_08485 199988bee2e903ed64724832faace24f 117 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 24 8.3E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL543_08485 199988bee2e903ed64724832faace24f 117 Pfam PF02501 Type II secretion system (T2SS), protein I 40 115 9.0E-23 T 11-10-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 AL543_08485 199988bee2e903ed64724832faace24f 117 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL543_08485 199988bee2e903ed64724832faace24f 117 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 3.1E-9 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL543_08485 199988bee2e903ed64724832faace24f 117 TIGRFAM TIGR01707 gspI: type II secretion system protein I 6 103 1.8E-42 T 11-10-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 AL543_08485 199988bee2e903ed64724832faace24f 117 Gene3D G3DSA:3.30.1300.30 30 117 3.8E-36 T 11-10-2018 AL543_00565 2795f211847b7a563017d7f52b9f23de 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 1.0E-29 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL543_00565 2795f211847b7a563017d7f52b9f23de 70 SMART SM00357 6 70 4.2E-32 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 AL543_00565 2795f211847b7a563017d7f52b9f23de 70 PIRSF PIRSF002599 1 70 3.2E-25 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 AL543_00565 2795f211847b7a563017d7f52b9f23de 70 PRINTS PR00050 Cold shock protein signature 43 61 1.7E-16 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL543_00565 2795f211847b7a563017d7f52b9f23de 70 PRINTS PR00050 Cold shock protein signature 28 37 1.7E-16 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL543_00565 2795f211847b7a563017d7f52b9f23de 70 PRINTS PR00050 Cold shock protein signature 7 22 1.7E-16 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL543_00565 2795f211847b7a563017d7f52b9f23de 70 SUPERFAMILY SSF50249 3 69 6.86E-26 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL543_00565 2795f211847b7a563017d7f52b9f23de 70 Gene3D G3DSA:2.40.50.140 2 69 4.7E-30 T 11-10-2018 AL543_12580 368800df2d8f21850e5415819ad9bb19 370 Gene3D G3DSA:3.30.420.40 12 364 5.0E-133 T 11-10-2018 AL543_12580 368800df2d8f21850e5415819ad9bb19 370 Gene3D G3DSA:3.30.420.40 146 329 5.0E-133 T 11-10-2018 AL543_12580 368800df2d8f21850e5415819ad9bb19 370 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 5 369 41.896 T 11-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 AL543_12580 368800df2d8f21850e5415819ad9bb19 370 SUPERFAMILY SSF53067 6 343 2.29E-26 T 11-10-2018 AL543_12580 368800df2d8f21850e5415819ad9bb19 370 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 6 368 7.6E-179 T 11-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 AL543_01955 19c74b65e0ac413e376724e1d40adc8c 520 SUPERFAMILY SSF55874 392 518 8.5E-19 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_01955 19c74b65e0ac413e376724e1d40adc8c 520 Pfam PF17203 Single cache domain 3 42 165 5.5E-19 T 11-10-2018 IPR033463 Single cache domain 3 AL543_01955 19c74b65e0ac413e376724e1d40adc8c 520 Gene3D G3DSA:3.30.450.20 203 309 3.4E-8 T 11-10-2018 AL543_01955 19c74b65e0ac413e376724e1d40adc8c 520 Pfam PF14501 GHKL domain 414 518 5.1E-12 T 11-10-2018 IPR032834 Sensor histidine kinase NatK, C-terminal domain AL543_01955 19c74b65e0ac413e376724e1d40adc8c 520 Gene3D G3DSA:3.30.565.10 367 518 2.2E-23 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_01955 19c74b65e0ac413e376724e1d40adc8c 520 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 318 363 1.0E-6 T 11-10-2018 IPR039506 SpoOB, alpha-helical domain AL543_01955 19c74b65e0ac413e376724e1d40adc8c 520 SMART SM00387 413 520 1.8E-13 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_01955 19c74b65e0ac413e376724e1d40adc8c 520 SUPERFAMILY SSF103190 40 165 2.9E-31 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily AL543_01955 19c74b65e0ac413e376724e1d40adc8c 520 Gene3D G3DSA:3.30.450.20 33 166 3.4E-35 T 11-10-2018 AL543_15990 c90991ff337b8f3e648bb7a9aae82688 502 Pfam PF00005 ABC transporter 25 174 1.0E-26 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_15990 c90991ff337b8f3e648bb7a9aae82688 502 SMART SM00382 284 479 2.0 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_15990 c90991ff337b8f3e648bb7a9aae82688 502 SMART SM00382 34 221 3.8E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_15990 c90991ff337b8f3e648bb7a9aae82688 502 SUPERFAMILY SSF52540 248 489 1.55E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_15990 c90991ff337b8f3e648bb7a9aae82688 502 Gene3D G3DSA:3.40.50.300 1 241 2.1E-53 T 11-10-2018 AL543_15990 c90991ff337b8f3e648bb7a9aae82688 502 Pfam PF00005 ABC transporter 276 430 7.5E-18 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_15990 c90991ff337b8f3e648bb7a9aae82688 502 ProSitePatterns PS00211 ABC transporters family signature. 403 417 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_15990 c90991ff337b8f3e648bb7a9aae82688 502 SUPERFAMILY SSF52540 8 229 5.93E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_15990 c90991ff337b8f3e648bb7a9aae82688 502 Gene3D G3DSA:3.40.50.300 256 498 1.1E-38 T 11-10-2018 AL543_00745 185b21ab8833a7020911e5e6ded0036f 282 Pfam PF02678 Pirin 29 121 2.6E-34 T 11-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 AL543_00745 185b21ab8833a7020911e5e6ded0036f 282 Gene3D G3DSA:2.60.120.10 143 249 2.9E-87 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL543_00745 185b21ab8833a7020911e5e6ded0036f 282 Gene3D G3DSA:2.60.120.10 18 275 2.9E-87 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL543_00745 185b21ab8833a7020911e5e6ded0036f 282 Pfam PF05726 Pirin C-terminal cupin domain 181 279 1.7E-31 T 11-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 AL543_00745 185b21ab8833a7020911e5e6ded0036f 282 PIRSF PIRSF006232 3 282 2.6E-89 T 11-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 AL543_00745 185b21ab8833a7020911e5e6ded0036f 282 SUPERFAMILY SSF51182 7 281 9.95E-77 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AL543_12650 888e26f59a6ab8bdefefb49a8981bb88 108 Gene3D G3DSA:3.30.160.100 1 105 1.1E-32 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like AL543_12650 888e26f59a6ab8bdefefb49a8981bb88 108 SUPERFAMILY SSF69754 1 103 3.53E-29 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like AL543_12650 888e26f59a6ab8bdefefb49a8981bb88 108 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 100 5.1E-30 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 AL543_12650 888e26f59a6ab8bdefefb49a8981bb88 108 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 92 7.9E-21 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 AL543_10190 2ebcb25dc395f35c8cdb08c6ae7775a0 78 SUPERFAMILY SSF143800 2 76 6.47E-30 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_10190 2ebcb25dc395f35c8cdb08c6ae7775a0 78 Gene3D G3DSA:2.30.170.40 2 78 8.3E-33 T 11-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_10190 2ebcb25dc395f35c8cdb08c6ae7775a0 78 Pfam PF00830 Ribosomal L28 family 3 62 8.4E-26 T 11-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_10190 2ebcb25dc395f35c8cdb08c6ae7775a0 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 3.3E-27 T 11-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_10190 2ebcb25dc395f35c8cdb08c6ae7775a0 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.185 T 11-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_15065 8adc19d0f30ba4563705a4cc20e01148 301 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 147 299 5.0E-79 T 11-10-2018 IPR005642 Lysine exporter LysO AL543_15065 8adc19d0f30ba4563705a4cc20e01148 301 Pfam PF03956 Lysine exporter LysO 112 297 1.4E-54 T 11-10-2018 IPR005642 Lysine exporter LysO AL543_19270 7e5b8ccdaba71ef6a9fde45069b4b30c 334 PIRSF PIRSF028696 1 334 4.7E-122 T 11-10-2018 IPR016896 Protein of unknown function DUF2860 AL543_19270 7e5b8ccdaba71ef6a9fde45069b4b30c 334 Pfam PF11059 Protein of unknown function (DUF2860) 32 333 4.6E-102 T 11-10-2018 IPR016896 Protein of unknown function DUF2860 AL543_10870 645ba2435187e6497f2673fb42661358 327 SUPERFAMILY SSF50998 34 318 1.1E-41 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AL543_10870 645ba2435187e6497f2673fb42661358 327 Pfam PF00400 WD domain, G-beta repeat 158 190 0.0016 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 AL543_10870 645ba2435187e6497f2673fb42661358 327 Gene3D G3DSA:2.130.10.10 23 249 7.5E-32 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AL543_10870 645ba2435187e6497f2673fb42661358 327 Gene3D G3DSA:2.130.10.10 250 327 7.9E-6 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AL543_10870 645ba2435187e6497f2673fb42661358 327 SMART SM00320 278 324 270.0 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 AL543_10870 645ba2435187e6497f2673fb42661358 327 SMART SM00320 151 190 2.9E-4 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 AL543_10870 645ba2435187e6497f2673fb42661358 327 SMART SM00320 237 275 1.7 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 AL543_10870 645ba2435187e6497f2673fb42661358 327 SMART SM00320 193 231 0.073 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 AL543_10870 645ba2435187e6497f2673fb42661358 327 SMART SM00320 69 107 37.0 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 AL543_10870 645ba2435187e6497f2673fb42661358 327 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 177 191 - T 11-10-2018 IPR019775 WD40 repeat, conserved site AL543_13980 a055d0c0ba723cf1634c7e501a8b1531 250 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 5 245 28.226 T 11-10-2018 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 AL543_13980 a055d0c0ba723cf1634c7e501a8b1531 250 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 11 227 5.5E-41 T 11-10-2018 AL543_06945 45ee4066539d6d2f3cb3e26669aae934 761 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 34 470 5.0E-135 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL543_06945 45ee4066539d6d2f3cb3e26669aae934 761 SMART SM00434 13 463 3.5E-231 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL543_06945 45ee4066539d6d2f3cb3e26669aae934 761 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 6 745 33.82 T 11-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL543_06945 45ee4066539d6d2f3cb3e26669aae934 761 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 600 640 8.4E-4 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AL543_06945 45ee4066539d6d2f3cb3e26669aae934 761 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 647 691 9.6E-8 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AL543_06945 45ee4066539d6d2f3cb3e26669aae934 761 SUPERFAMILY SSF56719 33 485 1.83E-154 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AL543_06945 45ee4066539d6d2f3cb3e26669aae934 761 Gene3D G3DSA:1.10.268.10 371 456 4.4E-178 T 11-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AL543_06945 45ee4066539d6d2f3cb3e26669aae934 761 Gene3D G3DSA:2.120.10.90 502 751 2.3E-16 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AL543_06945 45ee4066539d6d2f3cb3e26669aae934 761 SUPERFAMILY SSF101904 499 743 2.49E-52 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AL543_06945 45ee4066539d6d2f3cb3e26669aae934 761 Gene3D G3DSA:3.30.1360.40 240 333 4.4E-178 T 11-10-2018 AL543_06945 45ee4066539d6d2f3cb3e26669aae934 761 Gene3D G3DSA:3.90.199.10 34 483 4.4E-178 T 11-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 AL543_06945 45ee4066539d6d2f3cb3e26669aae934 761 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 10 744 0.0 T 11-10-2018 AL543_05510 e4163abc25b13c36d26c896b91f17cf7 81 Pfam PF07362 Post-segregation antitoxin CcdA 11 81 3.0E-28 T 11-10-2018 IPR009956 Post-segregation antitoxin CcdA AL543_04060 41f84a29900677ca257b42417d850a73 394 SUPERFAMILY SSF51316 253 393 1.1E-59 T 11-10-2018 IPR011057 Mss4-like superfamily AL543_04060 41f84a29900677ca257b42417d850a73 394 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 55 214 35.835 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL543_04060 41f84a29900677ca257b42417d850a73 394 Pfam PF01641 SelR domain 259 377 1.3E-46 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AL543_04060 41f84a29900677ca257b42417d850a73 394 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 255 378 35.289 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AL543_04060 41f84a29900677ca257b42417d850a73 394 Gene3D G3DSA:3.30.1060.10 35 214 1.9E-64 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL543_04060 41f84a29900677ca257b42417d850a73 394 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 57 207 3.1E-51 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL543_04060 41f84a29900677ca257b42417d850a73 394 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 254 386 6.4E-61 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AL543_04060 41f84a29900677ca257b42417d850a73 394 Gene3D G3DSA:2.170.150.20 248 394 2.0E-57 T 11-10-2018 AL543_04060 41f84a29900677ca257b42417d850a73 394 Pfam PF01625 Peptide methionine sulfoxide reductase 57 208 1.7E-57 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL543_04060 41f84a29900677ca257b42417d850a73 394 SUPERFAMILY SSF55068 27 220 1.57E-72 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL543_19900 d98f8edb0ed842032cb494687b97ac3a 260 Pfam PF01311 Bacterial export proteins, family 1 13 246 7.3E-57 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AL543_19900 d98f8edb0ed842032cb494687b97ac3a 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 7.0E-16 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AL543_19900 d98f8edb0ed842032cb494687b97ac3a 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 7.0E-16 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AL543_19900 d98f8edb0ed842032cb494687b97ac3a 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 7.0E-16 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AL543_19900 d98f8edb0ed842032cb494687b97ac3a 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 7.0E-16 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AL543_19900 d98f8edb0ed842032cb494687b97ac3a 260 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 12 256 4.1E-78 T 11-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 AL543_18780 8a9720c6a6422b6d584bb5207430f71d 395 Pfam PF00534 Glycosyl transferases group 1 210 358 6.1E-14 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AL543_18780 8a9720c6a6422b6d584bb5207430f71d 395 SUPERFAMILY SSF53756 3 369 9.03E-33 T 11-10-2018 AL543_18780 8a9720c6a6422b6d584bb5207430f71d 395 Gene3D G3DSA:3.40.50.2000 15 369 4.4E-27 T 11-10-2018 AL543_18780 8a9720c6a6422b6d584bb5207430f71d 395 Gene3D G3DSA:3.40.50.2000 195 362 4.4E-27 T 11-10-2018 AL543_13530 b49b2b04eec619f8d1c87f7f87932df3 149 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 30.572 T 11-10-2018 IPR003791 Protein of unknown function UPF0178 AL543_13530 b49b2b04eec619f8d1c87f7f87932df3 149 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 18 145 5.9E-48 T 11-10-2018 IPR003791 Protein of unknown function UPF0178 AL543_15115 abc2825aad359c60cef64c54136fcf6e 328 Pfam PF14397 Sugar-transfer associated ATP-grasp 27 299 1.4E-115 T 11-10-2018 IPR039523 Alpha-L-glutamate ligase-related protein, ATP-grasp domain KEGG: 00270+6.3.2.2+6.3.2.3|KEGG: 00480+6.3.2.2+6.3.2.3|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AL543_15115 abc2825aad359c60cef64c54136fcf6e 328 TIGRFAM TIGR02291 rimK_rel_E_lig: alpha-L-glutamate ligase homolog 10 323 2.7E-167 T 11-10-2018 IPR011758 Alpha-L-glutamate ligase-related protein AL543_15115 abc2825aad359c60cef64c54136fcf6e 328 SUPERFAMILY SSF56059 51 285 7.38E-20 T 11-10-2018 AL543_12985 d64a5e196184afd742dbdd1a82e7ea41 64 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 64 1.1E-34 T 11-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 AL543_12985 d64a5e196184afd742dbdd1a82e7ea41 64 Gene3D G3DSA:1.10.10.600 1 64 2.6E-29 T 11-10-2018 IPR036762 IscX-like superfamily AL543_12985 d64a5e196184afd742dbdd1a82e7ea41 64 PIRSF PIRSF039003 1 64 1.7E-33 T 11-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 AL543_12985 d64a5e196184afd742dbdd1a82e7ea41 64 SUPERFAMILY SSF140319 1 62 4.71E-28 T 11-10-2018 IPR036762 IscX-like superfamily AL543_12985 d64a5e196184afd742dbdd1a82e7ea41 64 Pfam PF04384 Iron-sulphur cluster assembly 1 64 2.6E-33 T 11-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 AL543_15420 7efd2e7c95fd8b62f9718697e20700a1 161 Gene3D G3DSA:3.40.630.30 2 161 2.0E-26 T 11-10-2018 AL543_15420 7efd2e7c95fd8b62f9718697e20700a1 161 Pfam PF00583 Acetyltransferase (GNAT) family 43 137 1.7E-12 T 11-10-2018 IPR000182 GNAT domain AL543_15420 7efd2e7c95fd8b62f9718697e20700a1 161 SUPERFAMILY SSF55729 1 159 3.09E-28 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL543_13740 ab348acabdced4c916cced2bcead61df 413 SMART SM00984 316 413 8.5E-22 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AL543_13740 ab348acabdced4c916cced2bcead61df 413 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 316 412 1.5E-21 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AL543_13740 ab348acabdced4c916cced2bcead61df 413 Gene3D G3DSA:3.40.50.720 1 204 3.0E-66 T 11-10-2018 AL543_13740 ab348acabdced4c916cced2bcead61df 413 PIRSF PIRSF000124 3 413 5.5E-82 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AL543_13740 ab348acabdced4c916cced2bcead61df 413 Gene3D G3DSA:3.40.50.720 205 413 1.8E-60 T 11-10-2018 AL543_13740 ab348acabdced4c916cced2bcead61df 413 SUPERFAMILY SSF48179 206 299 5.78E-29 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AL543_13740 ab348acabdced4c916cced2bcead61df 413 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 206 293 6.7E-27 T 11-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AL543_13740 ab348acabdced4c916cced2bcead61df 413 PIRSF PIRSF500136 1 413 2.9E-147 T 11-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 AL543_13740 ab348acabdced4c916cced2bcead61df 413 SUPERFAMILY SSF52413 306 412 7.72E-23 T 11-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 AL543_13740 ab348acabdced4c916cced2bcead61df 413 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 4 189 4.8E-59 T 11-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AL543_13740 ab348acabdced4c916cced2bcead61df 413 SUPERFAMILY SSF51735 4 199 2.63E-46 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_13740 ab348acabdced4c916cced2bcead61df 413 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 4 410 3.5E-124 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AL543_08085 f67109c409a67b7dada181406549b96a 876 Pfam PF00311 Phosphoenolpyruvate carboxylase 129 876 6.3E-288 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL543_08085 f67109c409a67b7dada181406549b96a 876 Gene3D G3DSA:1.20.1440.90 304 386 9.2E-24 T 11-10-2018 AL543_08085 f67109c409a67b7dada181406549b96a 876 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 876 17.903 T 11-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL543_08085 f67109c409a67b7dada181406549b96a 876 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 534 546 - T 11-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL543_08085 f67109c409a67b7dada181406549b96a 876 SUPERFAMILY SSF51621 6 876 0.0 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AL543_08085 f67109c409a67b7dada181406549b96a 876 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 134 145 - T 11-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL543_08085 f67109c409a67b7dada181406549b96a 876 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 186 202 1.4E-66 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL543_08085 f67109c409a67b7dada181406549b96a 876 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 245 260 1.4E-66 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL543_08085 f67109c409a67b7dada181406549b96a 876 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 532 552 1.4E-66 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL543_08085 f67109c409a67b7dada181406549b96a 876 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 383 403 1.4E-66 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL543_08085 f67109c409a67b7dada181406549b96a 876 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 133 146 1.4E-66 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL543_08085 f67109c409a67b7dada181406549b96a 876 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 574 603 1.4E-66 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL543_08085 f67109c409a67b7dada181406549b96a 876 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 706 732 1.4E-66 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL543_01855 27cd6d603b445cea248f04c90b808cce 659 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 443 625 1.1E-42 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_01855 27cd6d603b445cea248f04c90b808cce 659 SMART SM00304 330 382 0.0042 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_01855 27cd6d603b445cea248f04c90b808cce 659 Gene3D G3DSA:1.10.287.950 329 659 1.6E-69 T 11-10-2018 AL543_01855 27cd6d603b445cea248f04c90b808cce 659 SMART SM00283 397 658 1.7E-76 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_01855 27cd6d603b445cea248f04c90b808cce 659 SUPERFAMILY SSF58104 350 659 6.15E-72 T 11-10-2018 AL543_01855 27cd6d603b445cea248f04c90b808cce 659 Pfam PF12729 Four helix bundle sensory module for signal transduction 3 131 6.0E-14 T 11-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain AL543_20315 05a7bab858e87c0927afe212db571fff 249 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 173 242 1.1E-22 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AL543_20315 05a7bab858e87c0927afe212db571fff 249 Pfam PF00460 Flagella basal body rod protein 8 35 2.1E-5 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AL543_20315 05a7bab858e87c0927afe212db571fff 249 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 121 1.2E-33 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G AL543_20315 05a7bab858e87c0927afe212db571fff 249 SUPERFAMILY SSF117143 77 207 3.53E-17 T 11-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like AL543_20315 05a7bab858e87c0927afe212db571fff 249 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 6 226 7.1E-54 T 11-10-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 AL543_11555 5c0f69363aae02049d09bc903e077fc7 368 Pfam PF00437 Type II/IV secretion system protein 61 268 5.8E-37 T 11-10-2018 IPR001482 Type II/IV secretion system protein AL543_11555 5c0f69363aae02049d09bc903e077fc7 368 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 3.4E-126 T 11-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 AL543_11555 5c0f69363aae02049d09bc903e077fc7 368 Gene3D G3DSA:3.40.50.300 99 356 9.0E-87 T 11-10-2018 AL543_11555 5c0f69363aae02049d09bc903e077fc7 368 SUPERFAMILY SSF52540 4 334 1.12E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_11555 5c0f69363aae02049d09bc903e077fc7 368 Gene3D G3DSA:3.30.450.90 1 97 1.8E-21 T 11-10-2018 AL543_18715 8f71a758d282a7593f6f2bc9af2232a3 347 Gene3D G3DSA:1.10.3720.10 133 339 4.5E-18 T 11-10-2018 IPR035906 MetI-like superfamily AL543_18715 8f71a758d282a7593f6f2bc9af2232a3 347 SUPERFAMILY SSF161098 139 325 4.45E-20 T 11-10-2018 IPR035906 MetI-like superfamily AL543_18715 8f71a758d282a7593f6f2bc9af2232a3 347 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 161 341 9.0E-29 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL543_09715 45ec9fa65e8ff2e38444626732eb5cdc 263 Pfam PF07070 SpoOM protein 4 219 2.7E-79 T 11-10-2018 IPR009776 Sporulation stage 0, protein M AL543_05290 cda3c5980483a93c83b06a38f3a94834 137 SUPERFAMILY SSF54593 9 133 2.82E-23 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL543_05290 cda3c5980483a93c83b06a38f3a94834 137 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 128 2.6E-12 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL543_05290 cda3c5980483a93c83b06a38f3a94834 137 Gene3D G3DSA:3.10.180.10 6 135 5.5E-33 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL543_04815 cda3c5980483a93c83b06a38f3a94834 137 SUPERFAMILY SSF54593 9 133 2.82E-23 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL543_04815 cda3c5980483a93c83b06a38f3a94834 137 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 128 2.6E-12 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL543_04815 cda3c5980483a93c83b06a38f3a94834 137 Gene3D G3DSA:3.10.180.10 6 135 5.5E-33 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL543_20290 adf61d4d76a8ace72f02f51f7f42ac67 624 PRINTS PR01005 Flagellar hook-associated protein signature 12 35 1.0E-8 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AL543_20290 adf61d4d76a8ace72f02f51f7f42ac67 624 PRINTS PR01005 Flagellar hook-associated protein signature 214 232 1.0E-8 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AL543_20290 adf61d4d76a8ace72f02f51f7f42ac67 624 PRINTS PR01005 Flagellar hook-associated protein signature 50 72 1.0E-8 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AL543_20290 adf61d4d76a8ace72f02f51f7f42ac67 624 PRINTS PR01005 Flagellar hook-associated protein signature 360 382 1.0E-8 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AL543_20290 adf61d4d76a8ace72f02f51f7f42ac67 624 SUPERFAMILY SSF64518 168 622 4.71E-25 T 11-10-2018 AL543_20290 adf61d4d76a8ace72f02f51f7f42ac67 624 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 5 345 1.4E-59 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AL543_20290 adf61d4d76a8ace72f02f51f7f42ac67 624 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 578 622 5.3E-9 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AL543_11615 5adf32f9af442c97a01170f2658b6120 298 Pfam PF03466 LysR substrate binding domain 88 292 5.8E-25 T 11-10-2018 IPR005119 LysR, substrate-binding AL543_11615 5adf32f9af442c97a01170f2658b6120 298 Gene3D G3DSA:1.10.10.10 2 91 6.5E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_11615 5adf32f9af442c97a01170f2658b6120 298 SUPERFAMILY SSF53850 89 295 5.43E-26 T 11-10-2018 AL543_11615 5adf32f9af442c97a01170f2658b6120 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 1.3E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_11615 5adf32f9af442c97a01170f2658b6120 298 Gene3D G3DSA:3.40.190.290 92 292 1.9E-33 T 11-10-2018 AL543_11615 5adf32f9af442c97a01170f2658b6120 298 SUPERFAMILY SSF46785 3 88 2.92E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_11530 98f2334b36dfd0838806cc2f89c74d1f 97 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 7 91 7.0E-28 T 11-10-2018 IPR005228 Conserved hypothetical protein CHP00251 AL543_11530 98f2334b36dfd0838806cc2f89c74d1f 97 Gene3D G3DSA:3.30.1200.10 1 97 1.3E-34 T 11-10-2018 IPR036591 YggU-like superfamily AL543_11530 98f2334b36dfd0838806cc2f89c74d1f 97 SUPERFAMILY SSF69786 3 95 2.22E-32 T 11-10-2018 IPR036591 YggU-like superfamily AL543_11530 98f2334b36dfd0838806cc2f89c74d1f 97 SMART SM01152 7 83 1.0E-37 T 11-10-2018 IPR003746 Protein of unknown function DUF167 AL543_11530 98f2334b36dfd0838806cc2f89c74d1f 97 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 11 82 9.2E-25 T 11-10-2018 IPR003746 Protein of unknown function DUF167 AL543_11530 98f2334b36dfd0838806cc2f89c74d1f 97 Hamap MF_00634 UPF0235 protein YggU [yggU]. 7 97 20.209 T 11-10-2018 IPR003746 Protein of unknown function DUF167 AL543_11420 c8ecf9e1c105844ec2b0a45825d216a7 431 SUPERFAMILY SSF109998 27 199 3.27E-37 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily AL543_11420 c8ecf9e1c105844ec2b0a45825d216a7 431 Hamap MF_01183 Chaperone SurA [surA]. 11 426 31.69 T 11-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 AL543_11420 c8ecf9e1c105844ec2b0a45825d216a7 431 Pfam PF00639 PPIC-type PPIASE domain 287 378 1.1E-21 T 11-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 AL543_11420 c8ecf9e1c105844ec2b0a45825d216a7 431 Gene3D G3DSA:3.10.50.40 281 383 1.1E-74 T 11-10-2018 AL543_11420 c8ecf9e1c105844ec2b0a45825d216a7 431 Gene3D G3DSA:3.10.50.40 177 384 1.1E-74 T 11-10-2018 AL543_11420 c8ecf9e1c105844ec2b0a45825d216a7 431 SUPERFAMILY SSF54534 281 383 9.16E-29 T 11-10-2018 AL543_11420 c8ecf9e1c105844ec2b0a45825d216a7 431 SUPERFAMILY SSF54534 175 273 1.05E-24 T 11-10-2018 AL543_11420 c8ecf9e1c105844ec2b0a45825d216a7 431 Pfam PF13616 PPIC-type PPIASE domain 166 272 5.9E-23 T 11-10-2018 AL543_11420 c8ecf9e1c105844ec2b0a45825d216a7 431 Gene3D G3DSA:1.10.4030.10 24 150 7.4E-35 T 11-10-2018 AL543_11420 c8ecf9e1c105844ec2b0a45825d216a7 431 Pfam PF09312 SurA N-terminal domain 27 144 8.1E-41 T 11-10-2018 IPR015391 SurA N-terminal AL543_17470 284ab97dcf9605192bb595dc7e91b836 237 Gene3D G3DSA:3.20.20.450 8 230 6.9E-23 T 11-10-2018 IPR035919 EAL domain superfamily AL543_17470 284ab97dcf9605192bb595dc7e91b836 237 SMART SM00052 5 226 2.0E-7 T 11-10-2018 IPR001633 EAL domain AL543_17470 284ab97dcf9605192bb595dc7e91b836 237 Pfam PF00563 EAL domain 19 223 4.2E-16 T 11-10-2018 IPR001633 EAL domain AL543_17470 284ab97dcf9605192bb595dc7e91b836 237 SUPERFAMILY SSF141868 20 223 3.79E-26 T 11-10-2018 IPR035919 EAL domain superfamily AL543_12475 15c4a399ead41d5615ed3105ee0f1915 221 Pfam PF02976 DNA mismatch repair enzyme MutH 53 151 2.8E-33 T 11-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 AL543_12475 15c4a399ead41d5615ed3105ee0f1915 221 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 5 219 1.3E-101 T 11-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 AL543_12475 15c4a399ead41d5615ed3105ee0f1915 221 SUPERFAMILY SSF52980 3 220 2.41E-82 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AL543_12475 15c4a399ead41d5615ed3105ee0f1915 221 SMART SM00927 53 151 5.2E-65 T 11-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 AL543_12475 15c4a399ead41d5615ed3105ee0f1915 221 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 221 149.934 T 11-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 AL543_12475 15c4a399ead41d5615ed3105ee0f1915 221 Gene3D G3DSA:3.40.600.10 1 220 6.9E-55 T 11-10-2018 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily GO:0003677|GO:0004519 AL543_06645 8360bf53fe9f18d3ebc63b1b28b1b867 162 Pfam PF03737 Aldolase/RraA 6 153 4.1E-42 T 11-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AL543_06645 8360bf53fe9f18d3ebc63b1b28b1b867 162 SUPERFAMILY SSF89562 2 159 3.4E-49 T 11-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily AL543_06645 8360bf53fe9f18d3ebc63b1b28b1b867 162 Gene3D G3DSA:3.50.30.40 1 162 4.1E-68 T 11-10-2018 AL543_06645 8360bf53fe9f18d3ebc63b1b28b1b867 162 TIGRFAM TIGR01935 NOT-MenG: RraA family 6 155 2.3E-69 T 11-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 AL543_18330 3cd22e08fd674eb53e4dbf06352a574e 35 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 30 1.1E-20 T 11-10-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 AL543_18330 3cd22e08fd674eb53e4dbf06352a574e 35 Pfam PF08173 Membrane bound YbgT-like protein 1 27 1.3E-17 T 11-10-2018 IPR012994 Membrane bound YbgT-like AL543_19580 82851d9483ca8da14775fcdb50673434 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 2.4E-61 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL543_19580 82851d9483ca8da14775fcdb50673434 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 2.4E-61 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL543_19580 82851d9483ca8da14775fcdb50673434 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 2.4E-61 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL543_19580 82851d9483ca8da14775fcdb50673434 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 2.4E-61 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL543_19580 82851d9483ca8da14775fcdb50673434 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 632 645 2.4E-61 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL543_19580 82851d9483ca8da14775fcdb50673434 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 2.4E-61 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL543_19580 82851d9483ca8da14775fcdb50673434 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 2.4E-61 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL543_19580 82851d9483ca8da14775fcdb50673434 651 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 642 1.3E-259 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL543_19580 82851d9483ca8da14775fcdb50673434 651 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 639 5.3E-126 T 11-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal AL543_19580 82851d9483ca8da14775fcdb50673434 651 Pfam PF01578 Cytochrome C assembly protein 89 297 1.3E-54 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AL543_19580 82851d9483ca8da14775fcdb50673434 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 2.1E-94 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL543_19580 82851d9483ca8da14775fcdb50673434 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 2.1E-94 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL543_19580 82851d9483ca8da14775fcdb50673434 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 2.1E-94 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL543_19580 82851d9483ca8da14775fcdb50673434 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 2.1E-94 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL543_19580 82851d9483ca8da14775fcdb50673434 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 2.1E-94 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL543_19580 82851d9483ca8da14775fcdb50673434 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 2.1E-94 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL543_19580 82851d9483ca8da14775fcdb50673434 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 2.1E-94 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL543_19580 82851d9483ca8da14775fcdb50673434 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 2.1E-94 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL543_11205 b29a761958d728955c1d87ca05c0710a 256 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 23 4.8E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL543_11205 b29a761958d728955c1d87ca05c0710a 256 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 23 5.9E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL543_11205 b29a761958d728955c1d87ca05c0710a 256 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 3 23 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL543_06750 5d868d788ac2b7e6ef7c3b2c9d219cbf 137 PRINTS PR00502 NUDIX hydrolase family signature 34 48 3.0E-9 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL543_06750 5d868d788ac2b7e6ef7c3b2c9d219cbf 137 PRINTS PR00502 NUDIX hydrolase family signature 48 63 3.0E-9 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL543_06750 5d868d788ac2b7e6ef7c3b2c9d219cbf 137 TIGRFAM TIGR00586 mutt: mutator mutT protein 2 126 8.9E-39 T 11-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 AL543_06750 5d868d788ac2b7e6ef7c3b2c9d219cbf 137 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AL543_06750 5d868d788ac2b7e6ef7c3b2c9d219cbf 137 SUPERFAMILY SSF55811 2 127 1.49E-33 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AL543_06750 5d868d788ac2b7e6ef7c3b2c9d219cbf 137 Gene3D G3DSA:3.90.79.10 1 132 1.4E-42 T 11-10-2018 AL543_06750 5d868d788ac2b7e6ef7c3b2c9d219cbf 137 Pfam PF00293 NUDIX domain 6 126 7.4E-20 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL543_02480 64b6d8f6631b15046c6c1d2f60a70f9b 331 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 148 175 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AL543_02480 64b6d8f6631b15046c6c1d2f60a70f9b 331 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 224 240 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AL543_02480 64b6d8f6631b15046c6c1d2f60a70f9b 331 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 298 7.0E-51 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AL543_02480 64b6d8f6631b15046c6c1d2f60a70f9b 331 SUPERFAMILY SSF51735 103 299 3.25E-54 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_02480 64b6d8f6631b15046c6c1d2f60a70f9b 331 SUPERFAMILY SSF52283 1 136 1.3E-42 T 11-10-2018 AL543_02480 64b6d8f6631b15046c6c1d2f60a70f9b 331 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 327 1.3E-35 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 AL543_02480 64b6d8f6631b15046c6c1d2f60a70f9b 331 Gene3D G3DSA:3.40.50.720 4 317 3.8E-133 T 11-10-2018 AL543_02480 64b6d8f6631b15046c6c1d2f60a70f9b 331 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 195 217 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AL543_02480 64b6d8f6631b15046c6c1d2f60a70f9b 331 Gene3D G3DSA:3.40.50.720 103 298 3.8E-133 T 11-10-2018 AL543_06905 7060170af1da95c8a2c1978acde1ca2b 296 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 28 294 7.9E-93 T 11-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 AL543_06905 7060170af1da95c8a2c1978acde1ca2b 296 SUPERFAMILY SSF54675 13 128 5.89E-32 T 11-10-2018 AL543_06905 7060170af1da95c8a2c1978acde1ca2b 296 Gene3D G3DSA:3.20.20.70 138 284 2.6E-127 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_06905 7060170af1da95c8a2c1978acde1ca2b 296 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 130 293 1.9E-58 T 11-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 AL543_06905 7060170af1da95c8a2c1978acde1ca2b 296 SUPERFAMILY SSF51690 130 294 2.9E-60 T 11-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AL543_06905 7060170af1da95c8a2c1978acde1ca2b 296 PIRSF PIRSF006250 16 296 5.1E-99 T 11-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 AL543_06905 7060170af1da95c8a2c1978acde1ca2b 296 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 41 127 1.9E-25 T 11-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 AL543_06905 7060170af1da95c8a2c1978acde1ca2b 296 Gene3D G3DSA:3.90.1170.20 20 293 2.6E-127 T 11-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 AL543_19670 a4083b7067d51e85600b9e61262d5a6f 157 SUPERFAMILY SSF53254 2 144 8.99E-23 T 11-10-2018 IPR029033 Histidine phosphatase superfamily AL543_19670 a4083b7067d51e85600b9e61262d5a6f 157 Gene3D G3DSA:3.40.50.1240 3 157 5.0E-36 T 11-10-2018 IPR029033 Histidine phosphatase superfamily AL543_19670 a4083b7067d51e85600b9e61262d5a6f 157 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 3 157 6.4E-38 T 11-10-2018 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0101006 AL543_19670 a4083b7067d51e85600b9e61262d5a6f 157 PIRSF PIRSF000709 2 90 1.1E-4 T 11-10-2018 AL543_19670 a4083b7067d51e85600b9e61262d5a6f 157 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 81 1.7E-9 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AL543_19670 a4083b7067d51e85600b9e61262d5a6f 157 SMART SM00855 4 119 3.0E-6 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AL543_20010 e85cb1e29e3853973587826eb256343f 377 SUPERFAMILY SSF64518 1 376 3.01E-96 T 11-10-2018 AL543_20010 e85cb1e29e3853973587826eb256343f 377 Gene3D G3DSA:1.20.1330.10 44 327 5.3E-78 T 11-10-2018 AL543_20010 e85cb1e29e3853973587826eb256343f 377 Gene3D G3DSA:3.30.70.2120 174 275 5.3E-78 T 11-10-2018 AL543_20010 e85cb1e29e3853973587826eb256343f 377 Gene3D G3DSA:1.10.8.410 328 376 7.5E-20 T 11-10-2018 AL543_20010 e85cb1e29e3853973587826eb256343f 377 PRINTS PR00207 Flagellin signature 37 54 2.0E-27 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL543_20010 e85cb1e29e3853973587826eb256343f 377 PRINTS PR00207 Flagellin signature 111 134 2.0E-27 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL543_20010 e85cb1e29e3853973587826eb256343f 377 PRINTS PR00207 Flagellin signature 76 95 2.0E-27 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL543_20010 e85cb1e29e3853973587826eb256343f 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 1.2E-24 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL543_20010 e85cb1e29e3853973587826eb256343f 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 142 1.5E-41 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL543_20010 e85cb1e29e3853973587826eb256343f 377 Pfam PF07196 Flagellin hook IN motif 194 249 2.9E-11 T 11-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 AL543_11825 512d0a149797826ee2557197ed429340 354 PRINTS PR00142 RecA protein signature 127 156 5.8E-84 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AL543_11825 512d0a149797826ee2557197ed429340 354 PRINTS PR00142 RecA protein signature 210 238 5.8E-84 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AL543_11825 512d0a149797826ee2557197ed429340 354 PRINTS PR00142 RecA protein signature 93 122 5.8E-84 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AL543_11825 512d0a149797826ee2557197ed429340 354 PRINTS PR00142 RecA protein signature 243 272 5.8E-84 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AL543_11825 512d0a149797826ee2557197ed429340 354 PRINTS PR00142 RecA protein signature 297 314 5.8E-84 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AL543_11825 512d0a149797826ee2557197ed429340 354 PRINTS PR00142 RecA protein signature 165 194 5.8E-84 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AL543_11825 512d0a149797826ee2557197ed429340 354 Hamap MF_00268 Protein RecA [recA]. 5 329 50.628 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AL543_11825 512d0a149797826ee2557197ed429340 354 Gene3D G3DSA:3.30.250.10 268 326 2.4E-26 T 11-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal AL543_11825 512d0a149797826ee2557197ed429340 354 SMART SM00382 57 228 1.4E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_11825 512d0a149797826ee2557197ed429340 354 Gene3D G3DSA:3.40.50.300 26 267 2.4E-83 T 11-10-2018 AL543_11825 512d0a149797826ee2557197ed429340 354 Pfam PF00154 recA bacterial DNA recombination protein 7 267 5.4E-143 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AL543_11825 512d0a149797826ee2557197ed429340 354 SUPERFAMILY SSF52540 4 266 4.92E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_11825 512d0a149797826ee2557197ed429340 354 ProSitePatterns PS00321 recA signature. 213 221 - T 11-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 AL543_11825 512d0a149797826ee2557197ed429340 354 SUPERFAMILY SSF54752 269 325 4.58E-21 T 11-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal AL543_11825 512d0a149797826ee2557197ed429340 354 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 2.8E-170 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AL543_16325 8b2cb79aa2929f779e687a3e275ca338 104 SUPERFAMILY SSF103481 5 102 4.18E-18 T 11-10-2018 AL543_16325 8b2cb79aa2929f779e687a3e275ca338 104 Gene3D G3DSA:1.10.3730.20 1 104 1.6E-29 T 11-10-2018 AL543_16325 8b2cb79aa2929f779e687a3e275ca338 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 1.5E-25 T 11-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 AL543_09660 97edd4937929991e79eb1c3318f6dd6c 613 Pfam PF00920 Dehydratase family 34 604 5.1E-219 T 11-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL543_09660 97edd4937929991e79eb1c3318f6dd6c 613 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL543_09660 97edd4937929991e79eb1c3318f6dd6c 613 SUPERFAMILY SSF52016 421 608 1.18E-60 T 11-10-2018 AL543_09660 97edd4937929991e79eb1c3318f6dd6c 613 SUPERFAMILY SSF143975 3 420 8.11E-135 T 11-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL543_09660 97edd4937929991e79eb1c3318f6dd6c 613 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 607 2.3E-263 T 11-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL543_09660 97edd4937929991e79eb1c3318f6dd6c 613 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 607 44.979 T 11-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL543_09660 97edd4937929991e79eb1c3318f6dd6c 613 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL543_09660 97edd4937929991e79eb1c3318f6dd6c 613 Gene3D G3DSA:3.50.30.80 421 573 2.4E-55 T 11-10-2018 AL543_16615 0ca9dac624121de0dfca5472e193865d 54 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 2.5E-21 T 11-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type AL543_16615 0ca9dac624121de0dfca5472e193865d 54 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 48 5.3E-16 T 11-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type AL543_14845 fbf439e1548cd73aff72999f4c2a550d 198 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 28 185 4.7E-55 T 11-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like AL543_14845 fbf439e1548cd73aff72999f4c2a550d 198 SUPERFAMILY SSF89392 20 197 4.32E-52 T 11-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX AL543_14845 fbf439e1548cd73aff72999f4c2a550d 198 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 5 196 30.767 T 11-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 AL543_14845 fbf439e1548cd73aff72999f4c2a550d 198 Gene3D G3DSA:2.50.20.10 16 197 5.8E-48 T 11-10-2018 AL543_14845 fbf439e1548cd73aff72999f4c2a550d 198 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 5 197 1.7E-57 T 11-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 AL543_20045 0910df42f78fb8ebb8f8c3437e529ee9 377 Gene3D G3DSA:3.40.630.10 9 364 4.9E-127 T 11-10-2018 AL543_20045 0910df42f78fb8ebb8f8c3437e529ee9 377 SUPERFAMILY SSF55031 181 290 1.14E-28 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AL543_20045 0910df42f78fb8ebb8f8c3437e529ee9 377 Gene3D G3DSA:3.30.70.360 181 294 4.9E-127 T 11-10-2018 AL543_20045 0910df42f78fb8ebb8f8c3437e529ee9 377 Pfam PF07687 Peptidase dimerisation domain 177 284 1.2E-23 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain AL543_20045 0910df42f78fb8ebb8f8c3437e529ee9 377 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 4 377 51.937 T 11-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 AL543_20045 0910df42f78fb8ebb8f8c3437e529ee9 377 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 99 137 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AL543_20045 0910df42f78fb8ebb8f8c3437e529ee9 377 Pfam PF01546 Peptidase family M20/M25/M40 65 373 3.1E-43 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 AL543_20045 0910df42f78fb8ebb8f8c3437e529ee9 377 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 7 375 1.3E-184 T 11-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 AL543_20045 0910df42f78fb8ebb8f8c3437e529ee9 377 SUPERFAMILY SSF53187 6 376 6.29E-65 T 11-10-2018 AL543_05930 73b006095cfa318858dc0ed8375425a0 160 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 4 109 6.1E-26 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain AL543_05930 73b006095cfa318858dc0ed8375425a0 160 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 67 99 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AL543_05930 73b006095cfa318858dc0ed8375425a0 160 SUPERFAMILY SSF53927 7 128 2.61E-31 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AL543_05930 73b006095cfa318858dc0ed8375425a0 160 Gene3D G3DSA:3.40.140.10 2 154 5.5E-41 T 11-10-2018 AL543_05930 73b006095cfa318858dc0ed8375425a0 160 PIRSF PIRSF006019 1 147 7.8E-45 T 11-10-2018 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AL543_14310 c25f0ba632d8e9a582e879b8df91b8e8 213 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 9 198 3.3E-42 T 11-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 AL543_14310 c25f0ba632d8e9a582e879b8df91b8e8 213 TIGRFAM TIGR00235 udk: uridine kinase 3 211 7.1E-91 T 11-10-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 AL543_14310 c25f0ba632d8e9a582e879b8df91b8e8 213 Hamap MF_00551 Uridine kinase [udk]. 4 212 39.611 T 11-10-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 AL543_14310 c25f0ba632d8e9a582e879b8df91b8e8 213 PRINTS PR00988 Uridine kinase signature 178 191 4.4E-37 T 11-10-2018 AL543_14310 c25f0ba632d8e9a582e879b8df91b8e8 213 PRINTS PR00988 Uridine kinase signature 41 52 4.4E-37 T 11-10-2018 AL543_14310 c25f0ba632d8e9a582e879b8df91b8e8 213 PRINTS PR00988 Uridine kinase signature 156 167 4.4E-37 T 11-10-2018 AL543_14310 c25f0ba632d8e9a582e879b8df91b8e8 213 PRINTS PR00988 Uridine kinase signature 142 152 4.4E-37 T 11-10-2018 AL543_14310 c25f0ba632d8e9a582e879b8df91b8e8 213 PRINTS PR00988 Uridine kinase signature 7 24 4.4E-37 T 11-10-2018 AL543_14310 c25f0ba632d8e9a582e879b8df91b8e8 213 PRINTS PR00988 Uridine kinase signature 86 101 4.4E-37 T 11-10-2018 AL543_14310 c25f0ba632d8e9a582e879b8df91b8e8 213 Gene3D G3DSA:3.40.50.300 3 213 5.0E-61 T 11-10-2018 AL543_14310 c25f0ba632d8e9a582e879b8df91b8e8 213 SUPERFAMILY SSF52540 6 204 6.99E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_11400 1de46e9c76060126a21ba0cc6002fa50 267 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 267 47.792 T 11-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 AL543_11400 1de46e9c76060126a21ba0cc6002fa50 267 Gene3D G3DSA:3.60.21.10 2 266 5.6E-76 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like AL543_11400 1de46e9c76060126a21ba0cc6002fa50 267 PIRSF PIRSF000903 1 267 1.6E-119 T 11-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 AL543_11400 1de46e9c76060126a21ba0cc6002fa50 267 Pfam PF00149 Calcineurin-like phosphoesterase 5 127 2.4E-12 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AL543_11400 1de46e9c76060126a21ba0cc6002fa50 267 SUPERFAMILY SSF56300 4 252 4.11E-56 T 11-10-2018 AL543_11400 1de46e9c76060126a21ba0cc6002fa50 267 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 2 266 6.1E-115 T 11-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 AL543_04650 40b0d367f7850c80d3cd4888c36c30c8 314 Pfam PF01926 50S ribosome-binding GTPase 120 185 1.2E-14 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AL543_04650 40b0d367f7850c80d3cd4888c36c30c8 314 Gene3D G3DSA:1.10.1580.10 177 268 2.6E-29 T 11-10-2018 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily AL543_04650 40b0d367f7850c80d3cd4888c36c30c8 314 SUPERFAMILY SSF52540 12 187 4.84E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_04650 40b0d367f7850c80d3cd4888c36c30c8 314 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 6 275 2.9E-108 T 11-10-2018 IPR019991 GTP-binding protein, ribosome biogenesis AL543_04650 40b0d367f7850c80d3cd4888c36c30c8 314 PIRSF PIRSF006230 2 280 8.8E-105 T 11-10-2018 IPR016478 GTPase, MTG1 AL543_04650 40b0d367f7850c80d3cd4888c36c30c8 314 Gene3D G3DSA:3.40.50.300 6 174 5.2E-43 T 11-10-2018 AL543_16535 09f5bdec42fadbf2bc1a678eb2081e24 398 SMART SM01204 239 369 1.8E-26 T 11-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AL543_16535 09f5bdec42fadbf2bc1a678eb2081e24 398 SMART SM00897 38 238 1.6E-50 T 11-10-2018 IPR013702 FIST domain, N-terminal AL543_16535 09f5bdec42fadbf2bc1a678eb2081e24 398 Pfam PF08495 FIST N domain 41 236 6.7E-32 T 11-10-2018 IPR013702 FIST domain, N-terminal AL543_16535 09f5bdec42fadbf2bc1a678eb2081e24 398 Pfam PF10442 FIST C domain 239 366 1.1E-13 T 11-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AL543_07755 fa2b6ea283a1d2ae93ee95c140b5adcb 58 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 9.1E-27 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_07755 fa2b6ea283a1d2ae93ee95c140b5adcb 58 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 22.06 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_07755 fa2b6ea283a1d2ae93ee95c140b5adcb 58 Gene3D G3DSA:3.30.1390.20 1 58 3.6E-28 T 11-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily AL543_07755 fa2b6ea283a1d2ae93ee95c140b5adcb 58 PIRSF PIRSF002211 1 58 1.2E-28 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_07755 fa2b6ea283a1d2ae93ee95c140b5adcb 58 ProSitePatterns PS00634 Ribosomal protein L30 signature. 22 54 - T 11-10-2018 IPR018038 Ribosomal protein L30, conserved site AL543_07755 fa2b6ea283a1d2ae93ee95c140b5adcb 58 SUPERFAMILY SSF55129 1 58 1.83E-23 T 11-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily AL543_07755 fa2b6ea283a1d2ae93ee95c140b5adcb 58 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 2.6E-21 T 11-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AL543_05840 e7cdca1cb38405f3379be7a1460b4fc3 474 SUPERFAMILY SSF55021 399 462 1.53E-7 T 11-10-2018 AL543_05840 e7cdca1cb38405f3379be7a1460b4fc3 474 Gene3D G3DSA:3.30.70.260 319 461 8.0E-7 T 11-10-2018 AL543_05840 e7cdca1cb38405f3379be7a1460b4fc3 474 Gene3D G3DSA:3.30.70.260 326 396 8.0E-7 T 11-10-2018 AL543_05840 e7cdca1cb38405f3379be7a1460b4fc3 474 SUPERFAMILY SSF53633 5 308 1.13E-52 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AL543_05840 e7cdca1cb38405f3379be7a1460b4fc3 474 Gene3D G3DSA:3.40.1160.10 4 308 5.2E-56 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AL543_05840 e7cdca1cb38405f3379be7a1460b4fc3 474 Pfam PF00696 Amino acid kinase family 5 294 1.5E-24 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AL543_16860 e58f6608dfebbdd9b7b43497e0da5a49 553 Gene3D G3DSA:3.30.70.20 413 485 2.3E-11 T 11-10-2018 AL543_16860 e58f6608dfebbdd9b7b43497e0da5a49 553 Gene3D G3DSA:3.30.70.20 163 253 2.0E-12 T 11-10-2018 AL543_16860 e58f6608dfebbdd9b7b43497e0da5a49 553 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 420 431 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL543_16860 e58f6608dfebbdd9b7b43497e0da5a49 553 Pfam PF12838 4Fe-4S dicluster domain 185 231 1.6E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL543_16860 e58f6608dfebbdd9b7b43497e0da5a49 553 Pfam PF13187 4Fe-4S dicluster domain 419 465 1.8E-6 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL543_16860 e58f6608dfebbdd9b7b43497e0da5a49 553 SUPERFAMILY SSF54862 143 523 7.61E-39 T 11-10-2018 AL543_16860 e58f6608dfebbdd9b7b43497e0da5a49 553 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 451 462 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL543_14490 2db56acc7ecbbecdc70c9330b0e50658 723 SUPERFAMILY SSF56935 30 723 4.4E-89 T 11-10-2018 AL543_14490 2db56acc7ecbbecdc70c9330b0e50658 723 Gene3D G3DSA:2.40.170.20 171 723 2.2E-45 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AL543_14490 2db56acc7ecbbecdc70c9330b0e50658 723 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 56 723 2.1E-83 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AL543_14490 2db56acc7ecbbecdc70c9330b0e50658 723 Pfam PF00593 TonB dependent receptor 249 722 2.0E-26 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AL543_14490 2db56acc7ecbbecdc70c9330b0e50658 723 Pfam PF07715 TonB-dependent Receptor Plug Domain 55 157 5.9E-18 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AL543_14490 2db56acc7ecbbecdc70c9330b0e50658 723 Gene3D G3DSA:2.170.130.10 32 168 5.8E-23 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AL543_11135 d347b7abe571f27124c2c32d2480506c 673 SMART SM00052 400 652 2.4E-18 T 11-10-2018 IPR001633 EAL domain AL543_11135 d347b7abe571f27124c2c32d2480506c 673 Gene3D G3DSA:3.30.70.270 214 389 6.0E-17 T 11-10-2018 AL543_11135 d347b7abe571f27124c2c32d2480506c 673 Pfam PF00990 Diguanylate cyclase, GGDEF domain 232 382 1.8E-15 T 11-10-2018 IPR000160 GGDEF domain AL543_11135 d347b7abe571f27124c2c32d2480506c 673 Pfam PF17157 Gammaproteobacterial periplasmic sensor domain 42 137 1.8E-29 T 11-10-2018 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 AL543_11135 d347b7abe571f27124c2c32d2480506c 673 SUPERFAMILY SSF141868 412 640 1.03E-39 T 11-10-2018 IPR035919 EAL domain superfamily AL543_11135 d347b7abe571f27124c2c32d2480506c 673 Pfam PF00563 EAL domain 432 639 1.8E-45 T 11-10-2018 IPR001633 EAL domain AL543_11135 d347b7abe571f27124c2c32d2480506c 673 Gene3D G3DSA:3.20.20.450 399 642 3.3E-39 T 11-10-2018 IPR035919 EAL domain superfamily AL543_11135 d347b7abe571f27124c2c32d2480506c 673 SUPERFAMILY SSF55073 236 389 3.92E-13 T 11-10-2018 IPR029787 Nucleotide cyclase AL543_11135 d347b7abe571f27124c2c32d2480506c 673 SMART SM00267 219 389 4.1E-6 T 11-10-2018 IPR000160 GGDEF domain AL543_19155 baf22de478e2aed63cf491011b6d5bb9 404 Gene3D G3DSA:3.40.640.10 53 294 3.0E-146 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL543_19155 baf22de478e2aed63cf491011b6d5bb9 404 SUPERFAMILY SSF53383 6 399 8.78E-96 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL543_19155 baf22de478e2aed63cf491011b6d5bb9 404 Gene3D G3DSA:3.90.1150.10 21 398 3.0E-146 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL543_19155 baf22de478e2aed63cf491011b6d5bb9 404 Pfam PF00155 Aminotransferase class I and II 61 392 2.0E-48 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL543_17395 e2695ee53766bad42357f05b76a96ec6 383 Pfam PF06965 Na+/H+ antiporter 1 7 373 1.6E-143 T 11-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AL543_17395 e2695ee53766bad42357f05b76a96ec6 383 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 5 383 23.456 T 11-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AL543_17395 e2695ee53766bad42357f05b76a96ec6 383 Gene3D G3DSA:1.20.1530.10 3 380 1.4E-146 T 11-10-2018 IPR023171 Na/H antiporter domain superfamily AL543_17395 e2695ee53766bad42357f05b76a96ec6 383 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 8 373 8.1E-189 T 11-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AL543_04130 cbb659f4c8c51b52dce45675101bbbe6 592 TIGRFAM TIGR03262 PhnU2: putative 2-aminoethylphosphonate ABC transporter, permease protein 50 592 3.9E-241 T 11-10-2018 IPR017664 2-aminoethylphosphonate ABC transport system, permease protein, putative AL543_04130 cbb659f4c8c51b52dce45675101bbbe6 592 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 134 305 4.4E-6 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL543_04130 cbb659f4c8c51b52dce45675101bbbe6 592 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 413 575 2.6E-9 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL543_04130 cbb659f4c8c51b52dce45675101bbbe6 592 SUPERFAMILY SSF161098 50 303 4.71E-45 T 11-10-2018 IPR035906 MetI-like superfamily AL543_04130 cbb659f4c8c51b52dce45675101bbbe6 592 SUPERFAMILY SSF161098 324 574 6.41E-34 T 11-10-2018 IPR035906 MetI-like superfamily AL543_04130 cbb659f4c8c51b52dce45675101bbbe6 592 Gene3D G3DSA:1.10.3720.10 328 579 1.1E-30 T 11-10-2018 IPR035906 MetI-like superfamily AL543_04130 cbb659f4c8c51b52dce45675101bbbe6 592 Gene3D G3DSA:1.10.3720.10 46 309 1.7E-51 T 11-10-2018 IPR035906 MetI-like superfamily AL543_08595 d1685b4bd98767117ef34f1b4f497c82 334 Pfam PF00962 Adenosine/AMP deaminase 6 328 1.8E-88 T 11-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 AL543_08595 d1685b4bd98767117ef34f1b4f497c82 334 Gene3D G3DSA:3.20.20.140 1 332 4.2E-95 T 11-10-2018 AL543_08595 d1685b4bd98767117ef34f1b4f497c82 334 Hamap MF_00540 Adenosine deaminase [add]. 1 331 53.268 T 11-10-2018 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 AL543_08595 d1685b4bd98767117ef34f1b4f497c82 334 SUPERFAMILY SSF51556 5 325 1.76E-76 T 11-10-2018 IPR032466 Metal-dependent hydrolase AL543_08595 d1685b4bd98767117ef34f1b4f497c82 334 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 7 329 1.8E-123 T 11-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 AL543_04930 a55636ba497acd5eb55add233c984b0b 128 Gene3D G3DSA:3.90.1150.30 1 121 6.8E-11 T 11-10-2018 IPR038056 YjbR-like superfamily AL543_04930 a55636ba497acd5eb55add233c984b0b 128 SUPERFAMILY SSF142906 1 120 3.53E-29 T 11-10-2018 IPR038056 YjbR-like superfamily AL543_04930 a55636ba497acd5eb55add233c984b0b 128 Pfam PF04237 YjbR 12 103 9.7E-13 T 11-10-2018 IPR007351 Uncharacterised protein YjbR AL543_17365 f65a57685cd57596448984a537adbb68 445 Gene3D G3DSA:1.20.1600.10 30 438 4.5E-82 T 11-10-2018 AL543_17365 f65a57685cd57596448984a537adbb68 445 Pfam PF02321 Outer membrane efflux protein 32 221 5.1E-26 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AL543_17365 f65a57685cd57596448984a537adbb68 445 Pfam PF02321 Outer membrane efflux protein 241 423 1.6E-29 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AL543_17365 f65a57685cd57596448984a537adbb68 445 SUPERFAMILY SSF56954 13 429 1.03E-86 T 11-10-2018 AL543_17365 f65a57685cd57596448984a537adbb68 445 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 29 440 3.2E-134 T 11-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 AL543_01475 7c77745275fa663d4b6e441995e14740 198 Pfam PF02630 SCO1/SenC 34 174 1.7E-32 T 11-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL543_01475 7c77745275fa663d4b6e441995e14740 198 Gene3D G3DSA:3.40.30.10 22 193 5.9E-39 T 11-10-2018 AL543_01475 7c77745275fa663d4b6e441995e14740 198 SUPERFAMILY SSF52833 36 191 2.24E-37 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL543_13195 7a621b7faf53a75a734c96a77b602909 516 PRINTS PR00175 Sodium/alanine symporter signature 189 207 1.1E-56 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL543_13195 7a621b7faf53a75a734c96a77b602909 516 PRINTS PR00175 Sodium/alanine symporter signature 217 236 1.1E-56 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL543_13195 7a621b7faf53a75a734c96a77b602909 516 PRINTS PR00175 Sodium/alanine symporter signature 365 387 1.1E-56 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL543_13195 7a621b7faf53a75a734c96a77b602909 516 PRINTS PR00175 Sodium/alanine symporter signature 86 108 1.1E-56 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL543_13195 7a621b7faf53a75a734c96a77b602909 516 PRINTS PR00175 Sodium/alanine symporter signature 304 322 1.1E-56 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL543_13195 7a621b7faf53a75a734c96a77b602909 516 PRINTS PR00175 Sodium/alanine symporter signature 428 448 1.1E-56 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL543_13195 7a621b7faf53a75a734c96a77b602909 516 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 462 7.5E-134 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL543_13195 7a621b7faf53a75a734c96a77b602909 516 Pfam PF01235 Sodium:alanine symporter family 50 471 2.9E-147 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL543_13280 5273fa9b8865cfee99122ba3e7bb8989 178 Pfam PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase 9 173 5.9E-56 T 11-10-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 AL543_13280 5273fa9b8865cfee99122ba3e7bb8989 178 Hamap MF_00398 Probable apo-citrate lyase phosphoribosyl-dephospho-CoA transferase [citX]. 4 178 35.584 T 11-10-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 AL543_13280 5273fa9b8865cfee99122ba3e7bb8989 178 TIGRFAM TIGR03124 citrate_citX: holo-ACP synthase CitX 9 174 2.2E-63 T 11-10-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 AL543_11140 6139232408c2c6ab10e90dca04ba8a5a 479 SUPERFAMILY SSF53067 41 155 2.98E-15 T 11-10-2018 AL543_11140 6139232408c2c6ab10e90dca04ba8a5a 479 PIRSF PIRSF028153 1 479 2.2E-218 T 11-10-2018 IPR016871 MSHA biogenesis protein, MshI AL543_11140 6139232408c2c6ab10e90dca04ba8a5a 479 Gene3D G3DSA:3.30.420.380 41 174 8.4E-6 T 11-10-2018 AL543_18165 5a2ded3c00b0af934984f89d009d4a5f 330 Gene3D G3DSA:3.40.190.150 25 304 1.0E-54 T 11-10-2018 AL543_18165 5a2ded3c00b0af934984f89d009d4a5f 330 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 45 302 2.6E-27 T 11-10-2018 IPR005064 Bordetella uptake gene GO:0030288 AL543_18165 5a2ded3c00b0af934984f89d009d4a5f 330 Gene3D G3DSA:3.40.190.10 120 248 1.0E-54 T 11-10-2018 AL543_18165 5a2ded3c00b0af934984f89d009d4a5f 330 SUPERFAMILY SSF53850 108 287 2.17E-6 T 11-10-2018 AL543_20155 8700674a37a47444ec7d4fcd01a5d5f3 362 Pfam PF00472 RF-1 domain 218 323 6.0E-40 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AL543_20155 8700674a37a47444ec7d4fcd01a5d5f3 362 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 359 8.4E-172 T 11-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 AL543_20155 8700674a37a47444ec7d4fcd01a5d5f3 362 Gene3D G3DSA:3.30.160.20 212 293 1.0E-96 T 11-10-2018 AL543_20155 8700674a37a47444ec7d4fcd01a5d5f3 362 Pfam PF03462 PCRF domain 13 205 5.4E-77 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 AL543_20155 8700674a37a47444ec7d4fcd01a5d5f3 362 Gene3D G3DSA:1.20.58.410 3 104 8.5E-9 T 11-10-2018 AL543_20155 8700674a37a47444ec7d4fcd01a5d5f3 362 SMART SM00937 67 180 6.5E-69 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 AL543_20155 8700674a37a47444ec7d4fcd01a5d5f3 362 Gene3D G3DSA:3.30.70.1660 115 343 1.0E-96 T 11-10-2018 AL543_20155 8700674a37a47444ec7d4fcd01a5d5f3 362 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 230 246 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AL543_20155 8700674a37a47444ec7d4fcd01a5d5f3 362 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 359 41.168 T 11-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 AL543_20155 8700674a37a47444ec7d4fcd01a5d5f3 362 SUPERFAMILY SSF75620 12 355 1.7E-137 T 11-10-2018 AL543_14890 2da486978668015e4054a40a19f6b814 287 Hamap MF_00188 Protease HtpX [htpX]. 1 287 25.381 T 11-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 AL543_14890 2da486978668015e4054a40a19f6b814 287 Pfam PF01435 Peptidase family M48 79 287 1.2E-40 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AL543_14890 2da486978668015e4054a40a19f6b814 287 Gene3D G3DSA:3.30.2010.10 68 161 4.3E-37 T 11-10-2018 AL543_09770 ccc3f17f7ae48584520cb265f76269b3 190 Gene3D G3DSA:3.30.65.10 64 103 1.5E-8 T 11-10-2018 AL543_09770 ccc3f17f7ae48584520cb265f76269b3 190 Gene3D G3DSA:3.30.65.10 104 154 5.4E-5 T 11-10-2018 AL543_09770 ccc3f17f7ae48584520cb265f76269b3 190 Gene3D G3DSA:3.30.65.10 12 63 3.2E-7 T 11-10-2018 AL543_09770 ccc3f17f7ae48584520cb265f76269b3 190 SUPERFAMILY SSF57783 19 66 2.04E-14 T 11-10-2018 AL543_09770 ccc3f17f7ae48584520cb265f76269b3 190 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 115 153 1.8E-14 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AL543_09770 ccc3f17f7ae48584520cb265f76269b3 190 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 69 104 5.0E-16 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AL543_09770 ccc3f17f7ae48584520cb265f76269b3 190 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 24 59 4.5E-15 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AL543_09770 ccc3f17f7ae48584520cb265f76269b3 190 SUPERFAMILY SSF57783 111 148 1.36E-5 T 11-10-2018 AL543_09770 ccc3f17f7ae48584520cb265f76269b3 190 SUPERFAMILY SSF57783 68 104 4.42E-13 T 11-10-2018 AL543_20330 53cd75e211507ec800cf54ac5424a078 138 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 92 136 4.5E-12 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AL543_20330 53cd75e211507ec800cf54ac5424a078 138 Pfam PF00460 Flagella basal body rod protein 7 32 2.6E-7 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AL543_20330 53cd75e211507ec800cf54ac5424a078 138 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 11-10-2018 IPR019776 Flagellar basal body rod protein, conserved site AL543_20330 53cd75e211507ec800cf54ac5424a078 138 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 138 7.3E-52 T 11-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 AL543_08835 3eebd49137e22afcc167f6759d8a174f 109 Gene3D G3DSA:2.40.50.660 32 108 2.2E-5 T 11-10-2018 AL543_08835 3eebd49137e22afcc167f6759d8a174f 109 Pfam PF10694 Protein of unknown function (DUF2500) 5 105 1.0E-23 T 11-10-2018 IPR019635 Protein of unknown function DUF2500 AL543_06450 62bfeb0a508b4a697ce62d6243e80a3d 394 Pfam PF05940 NnrS protein 16 388 2.0E-107 T 11-10-2018 IPR010266 NnrS AL543_19775 a287e568a0ae8d6e52027a28569a3cbb 256 Gene3D G3DSA:3.40.1390.30 18 241 2.1E-82 T 11-10-2018 AL543_19775 a287e568a0ae8d6e52027a28569a3cbb 256 Gene3D G3DSA:3.40.1390.30 101 227 2.1E-82 T 11-10-2018 AL543_19775 a287e568a0ae8d6e52027a28569a3cbb 256 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 5 255 1.6E-66 T 11-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AL543_19775 a287e568a0ae8d6e52027a28569a3cbb 256 SUPERFAMILY SSF102705 5 255 1.02E-82 T 11-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily AL543_19775 a287e568a0ae8d6e52027a28569a3cbb 256 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 13 242 7.3E-60 T 11-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AL543_19390 91554b70e0dd39149f5ac56a77ddae7b 316 Gene3D G3DSA:3.40.47.10 1 170 1.9E-77 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL543_19390 91554b70e0dd39149f5ac56a77ddae7b 316 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 2.7E-30 T 11-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AL543_19390 91554b70e0dd39149f5ac56a77ddae7b 316 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 316 1.1E-145 T 11-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AL543_19390 91554b70e0dd39149f5ac56a77ddae7b 316 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 227 315 1.7E-34 T 11-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AL543_19390 91554b70e0dd39149f5ac56a77ddae7b 316 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 316 72.593 T 11-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AL543_19390 91554b70e0dd39149f5ac56a77ddae7b 316 SUPERFAMILY SSF53901 3 315 2.96E-71 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL543_19390 91554b70e0dd39149f5ac56a77ddae7b 316 Gene3D G3DSA:3.40.47.10 172 316 1.1E-47 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL543_12445 e51702a5d993d5045ca4cb5b75d62a2b 510 SUPERFAMILY SSF50249 16 154 2.94E-32 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL543_12445 e51702a5d993d5045ca4cb5b75d62a2b 510 SUPERFAMILY SSF55681 161 507 2.95E-118 T 11-10-2018 AL543_12445 e51702a5d993d5045ca4cb5b75d62a2b 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 391 407 8.1E-38 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AL543_12445 e51702a5d993d5045ca4cb5b75d62a2b 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 243 256 8.1E-38 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AL543_12445 e51702a5d993d5045ca4cb5b75d62a2b 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 214 230 8.1E-38 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AL543_12445 e51702a5d993d5045ca4cb5b75d62a2b 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 198 208 8.1E-38 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AL543_12445 e51702a5d993d5045ca4cb5b75d62a2b 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 261 278 8.1E-38 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AL543_12445 e51702a5d993d5045ca4cb5b75d62a2b 510 Pfam PF00152 tRNA synthetases class II (D, K and N) 161 506 7.5E-81 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL543_12445 e51702a5d993d5045ca4cb5b75d62a2b 510 Pfam PF01336 OB-fold nucleic acid binding domain 73 144 1.9E-7 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AL543_12445 e51702a5d993d5045ca4cb5b75d62a2b 510 Gene3D G3DSA:2.40.50.140 9 156 3.8E-29 T 11-10-2018 AL543_12445 e51702a5d993d5045ca4cb5b75d62a2b 510 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 24 509 43.14 T 11-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AL543_12445 e51702a5d993d5045ca4cb5b75d62a2b 510 Gene3D G3DSA:3.30.930.10 157 510 1.6E-130 T 11-10-2018 AL543_12445 e51702a5d993d5045ca4cb5b75d62a2b 510 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 19 509 4.7E-200 T 11-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AL543_17360 76d9990dc8203a0f4d198293a867e473 3582 SUPERFAMILY SSF51120 2775 2893 2.62E-9 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AL543_17360 76d9990dc8203a0f4d198293a867e473 3582 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2841 2859 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site AL543_17360 76d9990dc8203a0f4d198293a867e473 3582 SUPERFAMILY SSF53300 3043 3324 1.35E-18 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AL543_17360 76d9990dc8203a0f4d198293a867e473 3582 Gene3D G3DSA:2.150.10.10 3412 3454 6.9E-7 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AL543_17360 76d9990dc8203a0f4d198293a867e473 3582 SUPERFAMILY SSF51120 3408 3531 3.4E-27 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AL543_17360 76d9990dc8203a0f4d198293a867e473 3582 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 3443 3461 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site AL543_17360 76d9990dc8203a0f4d198293a867e473 3582 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 3452 3470 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site AL543_17360 76d9990dc8203a0f4d198293a867e473 3582 Pfam PF00092 von Willebrand factor type A domain 3073 3193 2.3E-8 T 11-10-2018 IPR002035 von Willebrand factor, type A AL543_17360 76d9990dc8203a0f4d198293a867e473 3582 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 3434 3452 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site AL543_17360 76d9990dc8203a0f4d198293a867e473 3582 PRINTS PR00313 NodO calcium binding signature 3429 3437 2.2E-8 T 11-10-2018 AL543_17360 76d9990dc8203a0f4d198293a867e473 3582 PRINTS PR00313 NodO calcium binding signature 3358 3369 2.2E-8 T 11-10-2018 AL543_17360 76d9990dc8203a0f4d198293a867e473 3582 PRINTS PR00313 NodO calcium binding signature 3456 3464 2.2E-8 T 11-10-2018 AL543_17360 76d9990dc8203a0f4d198293a867e473 3582 PRINTS PR00313 NodO calcium binding signature 3483 3492 2.2E-8 T 11-10-2018 AL543_17360 76d9990dc8203a0f4d198293a867e473 3582 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 3502 3579 1.1E-10 T 11-10-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass AL543_17360 76d9990dc8203a0f4d198293a867e473 3582 Gene3D G3DSA:3.40.50.410 3062 3220 1.9E-17 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AL543_17360 76d9990dc8203a0f4d198293a867e473 3582 Gene3D G3DSA:2.150.10.10 2789 2916 1.6E-8 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AL543_17360 76d9990dc8203a0f4d198293a867e473 3582 Gene3D G3DSA:2.150.10.10 3455 3578 1.2E-12 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AL543_07645 dd315207d742473e5a4e7498dc1a7baa 174 Pfam PF11736 Protein of unknown function (DUF3299) 39 169 1.7E-44 T 11-10-2018 IPR021727 Protein of unknown function DUF3299 AL543_07645 dd315207d742473e5a4e7498dc1a7baa 174 Gene3D G3DSA:2.40.50.870 33 174 1.7E-46 T 11-10-2018 AL543_07335 6758a604d8ddb23ff433e637092893e4 417 TIGRFAM TIGR00277 HDIG: HDIG domain 166 259 9.8E-8 T 11-10-2018 IPR006675 HDIG domain AL543_07335 6758a604d8ddb23ff433e637092893e4 417 Pfam PF11871 Domain of unknown function (DUF3391) 4 136 1.5E-33 T 11-10-2018 IPR021812 Protein of unknown function DUF3391 AL543_07335 6758a604d8ddb23ff433e637092893e4 417 SMART SM00471 164 300 2.3E-9 T 11-10-2018 IPR003607 HD/PDEase domain AL543_07335 6758a604d8ddb23ff433e637092893e4 417 SUPERFAMILY SSF109604 163 329 1.68E-27 T 11-10-2018 AL543_07335 6758a604d8ddb23ff433e637092893e4 417 Pfam PF01966 HD domain 170 290 4.8E-16 T 11-10-2018 IPR006674 HD domain AL543_07335 6758a604d8ddb23ff433e637092893e4 417 Gene3D G3DSA:1.10.3210.10 5 317 2.2E-54 T 11-10-2018 AL543_02340 3bc6a10b22c61b1c1622bc23950e7e4c 709 Pfam PF00990 Diguanylate cyclase, GGDEF domain 531 693 1.9E-36 T 11-10-2018 IPR000160 GGDEF domain AL543_02340 3bc6a10b22c61b1c1622bc23950e7e4c 709 SUPERFAMILY SSF55073 536 695 4.32E-37 T 11-10-2018 IPR029787 Nucleotide cyclase AL543_02340 3bc6a10b22c61b1c1622bc23950e7e4c 709 Gene3D G3DSA:3.30.70.270 517 696 1.5E-45 T 11-10-2018 AL543_02340 3bc6a10b22c61b1c1622bc23950e7e4c 709 Gene3D G3DSA:3.30.450.40 171 344 1.0E-8 T 11-10-2018 IPR029016 GAF-like domain superfamily AL543_02340 3bc6a10b22c61b1c1622bc23950e7e4c 709 SUPERFAMILY SSF55781 175 331 2.18E-8 T 11-10-2018 AL543_02340 3bc6a10b22c61b1c1622bc23950e7e4c 709 SMART SM00267 520 697 2.3E-47 T 11-10-2018 IPR000160 GGDEF domain AL543_02340 3bc6a10b22c61b1c1622bc23950e7e4c 709 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 528 695 7.4E-38 T 11-10-2018 IPR000160 GGDEF domain AL543_11620 7ae7bde2869bd9bd43ebae09b082740f 652 Gene3D G3DSA:2.170.130.10 32 161 8.6E-41 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AL543_11620 7ae7bde2869bd9bd43ebae09b082740f 652 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 40 - T 11-10-2018 IPR010916 TonB box, conserved site AL543_11620 7ae7bde2869bd9bd43ebae09b082740f 652 Gene3D G3DSA:2.40.170.20 167 652 2.8E-138 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AL543_11620 7ae7bde2869bd9bd43ebae09b082740f 652 Pfam PF07715 TonB-dependent Receptor Plug Domain 47 156 2.9E-28 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AL543_11620 7ae7bde2869bd9bd43ebae09b082740f 652 Pfam PF00593 TonB dependent receptor 200 650 3.8E-59 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AL543_11620 7ae7bde2869bd9bd43ebae09b082740f 652 SUPERFAMILY SSF56935 33 652 2.93E-126 T 11-10-2018 AL543_11620 7ae7bde2869bd9bd43ebae09b082740f 652 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 635 652 - T 11-10-2018 IPR010917 TonB-dependent receptor, conserved site AL543_07140 97c913fb7b12c61b9b811127340c4a1c 321 Pfam PF17188 MucB/RseB C-terminal domain 217 311 3.0E-28 T 11-10-2018 IPR033436 MucB/RseB, C-terminal AL543_07140 97c913fb7b12c61b9b811127340c4a1c 321 PIRSF PIRSF005427 1 316 3.0E-86 T 11-10-2018 IPR005588 MucB/RseB AL543_07140 97c913fb7b12c61b9b811127340c4a1c 321 Gene3D G3DSA:3.30.200.100 217 316 2.2E-28 T 11-10-2018 IPR038484 MucB/RseB, C-terminal domain superfamily AL543_07140 97c913fb7b12c61b9b811127340c4a1c 321 Gene3D G3DSA:2.50.20.10 24 208 1.6E-52 T 11-10-2018 AL543_07140 97c913fb7b12c61b9b811127340c4a1c 321 Pfam PF03888 MucB/RseB N-terminal domain 25 202 2.9E-59 T 11-10-2018 IPR033434 MucB/RseB, N-terminal AL543_12960 bdc0803d80de41cd33254c1bfd1d638c 127 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 1.4E-69 T 11-10-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 AL543_12960 bdc0803d80de41cd33254c1bfd1d638c 127 Gene3D G3DSA:3.90.1010.10 1 127 3.0E-59 T 11-10-2018 AL543_12960 bdc0803d80de41cd33254c1bfd1d638c 127 Pfam PF01592 NifU-like N terminal domain 2 126 3.2E-57 T 11-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 AL543_12960 bdc0803d80de41cd33254c1bfd1d638c 127 SUPERFAMILY SSF82649 1 125 2.49E-48 T 11-10-2018 AL543_11195 3f0df1089cbf81e86a47c310b4ad3113 168 Gene3D G3DSA:3.30.700.10 16 161 1.9E-10 T 11-10-2018 AL543_11195 3f0df1089cbf81e86a47c310b4ad3113 168 Pfam PF07963 Prokaryotic N-terminal methylation motif 12 35 4.2E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL543_11195 3f0df1089cbf81e86a47c310b4ad3113 168 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 14 36 8.5E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL543_11195 3f0df1089cbf81e86a47c310b4ad3113 168 SUPERFAMILY SSF54523 16 141 1.41E-13 T 11-10-2018 AL543_05530 418bfc75c700507d369d93c47b510107 268 SUPERFAMILY SSF82771 174 266 2.09E-10 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 AL543_05530 418bfc75c700507d369d93c47b510107 268 Gene3D G3DSA:3.40.1440.10 173 268 3.9E-7 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 AL543_16545 c5debf2e3aaa65ab7c7e4c6e19d10870 502 SUPERFAMILY SSF53720 14 493 3.53E-164 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AL543_16545 c5debf2e3aaa65ab7c7e4c6e19d10870 502 Gene3D G3DSA:3.40.605.10 23 488 2.1E-164 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AL543_16545 c5debf2e3aaa65ab7c7e4c6e19d10870 502 Gene3D G3DSA:3.40.309.10 266 460 2.1E-164 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AL543_16545 c5debf2e3aaa65ab7c7e4c6e19d10870 502 Pfam PF00171 Aldehyde dehydrogenase family 27 489 4.4E-166 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AL543_16545 c5debf2e3aaa65ab7c7e4c6e19d10870 502 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AL543_16545 c5debf2e3aaa65ab7c7e4c6e19d10870 502 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AL543_18155 18f8c5881dce6d116a7fcbf820a1a64c 413 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 284 371 8.0E-20 T 11-10-2018 IPR023885 4Fe4S-binding SPASM domain AL543_18155 18f8c5881dce6d116a7fcbf820a1a64c 413 Pfam PF04055 Radical SAM superfamily 22 181 2.7E-11 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL543_18155 18f8c5881dce6d116a7fcbf820a1a64c 413 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 174 406 2.0E-14 T 11-10-2018 AL543_18155 18f8c5881dce6d116a7fcbf820a1a64c 413 SUPERFAMILY SSF102114 23 352 5.1E-44 T 11-10-2018 AL543_18155 18f8c5881dce6d116a7fcbf820a1a64c 413 Pfam PF13186 Iron-sulfur cluster-binding domain 284 343 2.2E-8 T 11-10-2018 IPR023885 4Fe4S-binding SPASM domain AL543_18155 18f8c5881dce6d116a7fcbf820a1a64c 413 Gene3D G3DSA:3.20.20.70 11 392 1.4E-116 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_18155 18f8c5881dce6d116a7fcbf820a1a64c 413 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 14 390 8.8E-148 T 11-10-2018 AL543_11745 34a992ec4a8d6e3a1ad7e6837be35456 267 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 264 17.46 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AL543_11745 34a992ec4a8d6e3a1ad7e6837be35456 267 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 7 257 2.9E-74 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AL543_11745 34a992ec4a8d6e3a1ad7e6837be35456 267 Pfam PF02673 Bacitracin resistance protein BacA 7 258 4.4E-82 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AL543_05710 e9d372f4df6acc2ce61f511f26c0a991 657 SMART SM00283 381 656 1.0E-33 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_05710 e9d372f4df6acc2ce61f511f26c0a991 657 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 465 621 2.0E-36 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_05710 e9d372f4df6acc2ce61f511f26c0a991 657 Gene3D G3DSA:1.10.287.950 328 657 7.6E-52 T 11-10-2018 AL543_05710 e9d372f4df6acc2ce61f511f26c0a991 657 SUPERFAMILY SSF58104 368 656 4.05E-51 T 11-10-2018 AL543_05040 649ab2188ab5f6221cf2b0d60bbc6e34 205 SUPERFAMILY SSF159941 1 169 6.54E-49 T 11-10-2018 IPR024047 MM3350-like superfamily AL543_05040 649ab2188ab5f6221cf2b0d60bbc6e34 205 Gene3D G3DSA:3.10.290.30 1 188 1.3E-55 T 11-10-2018 IPR024047 MM3350-like superfamily AL543_05040 649ab2188ab5f6221cf2b0d60bbc6e34 205 Pfam PF07929 Plasmid pRiA4b ORF-3-like protein 4 184 2.5E-52 T 11-10-2018 IPR012912 Plasmid pRiA4b, Orf3 AL543_16090 b8671e1d37d564818e8e4c05d34a880a 214 Pfam PF13417 Glutathione S-transferase, N-terminal domain 5 83 1.3E-13 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL543_16090 b8671e1d37d564818e8e4c05d34a880a 214 SUPERFAMILY SSF52833 2 88 2.38E-22 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL543_16090 b8671e1d37d564818e8e4c05d34a880a 214 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 4 213 1.2E-90 T 11-10-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-204174|Reactome: R-HSA-71182 AL543_16090 b8671e1d37d564818e8e4c05d34a880a 214 Gene3D G3DSA:1.20.1050.10 91 214 4.7E-48 T 11-10-2018 AL543_16090 b8671e1d37d564818e8e4c05d34a880a 214 Gene3D G3DSA:3.40.30.10 2 90 4.3E-25 T 11-10-2018 AL543_16090 b8671e1d37d564818e8e4c05d34a880a 214 Pfam PF14497 Glutathione S-transferase, C-terminal domain 128 201 2.6E-5 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal AL543_16090 b8671e1d37d564818e8e4c05d34a880a 214 SUPERFAMILY SSF47616 84 212 3.27E-30 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AL543_10310 e44b42cfc54421f5c241ad74644f2d2f 350 Gene3D G3DSA:3.40.50.720 2 325 3.2E-138 T 11-10-2018 AL543_10310 e44b42cfc54421f5c241ad74644f2d2f 350 SUPERFAMILY SSF51735 1 337 3.61E-93 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_10310 e44b42cfc54421f5c241ad74644f2d2f 350 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 326 1.1E-98 T 11-10-2018 IPR016040 NAD(P)-binding domain AL543_10310 e44b42cfc54421f5c241ad74644f2d2f 350 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 38 49 4.5E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_10310 e44b42cfc54421f5c241ad74644f2d2f 350 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 4.5E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_10310 e44b42cfc54421f5c241ad74644f2d2f 350 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 4.5E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_10310 e44b42cfc54421f5c241ad74644f2d2f 350 Gene3D G3DSA:3.90.25.10 201 332 3.2E-138 T 11-10-2018 AL543_10310 e44b42cfc54421f5c241ad74644f2d2f 350 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 339 1.0E-158 T 11-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 AL543_04205 0945f60d2857f14fbcd9ad07e47d7460 203 SUPERFAMILY SSF47616 81 203 1.53E-26 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AL543_04205 0945f60d2857f14fbcd9ad07e47d7460 203 Gene3D G3DSA:1.20.1050.10 83 199 2.9E-58 T 11-10-2018 AL543_04205 0945f60d2857f14fbcd9ad07e47d7460 203 SUPERFAMILY SSF52833 1 86 5.72E-22 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL543_04205 0945f60d2857f14fbcd9ad07e47d7460 203 Pfam PF13410 Glutathione S-transferase, C-terminal domain 129 194 8.4E-12 T 11-10-2018 AL543_04205 0945f60d2857f14fbcd9ad07e47d7460 203 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 80 4.6E-17 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL543_04205 0945f60d2857f14fbcd9ad07e47d7460 203 Gene3D G3DSA:3.40.30.10 4 201 2.9E-58 T 11-10-2018 AL543_08210 8556f6e4ad3282910d12a11824f2dc9b 305 PIRSF PIRSF005355 1 303 2.5E-81 T 11-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 AL543_08210 8556f6e4ad3282910d12a11824f2dc9b 305 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 4 298 20.596 T 11-10-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 AL543_08210 8556f6e4ad3282910d12a11824f2dc9b 305 Pfam PF01040 UbiA prenyltransferase family 20 262 9.1E-36 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 AL543_08210 8556f6e4ad3282910d12a11824f2dc9b 305 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 13 296 6.1E-98 T 11-10-2018 AL543_00545 78ae00d2a3dc8d3b4cb434d1b6ea630d 311 PIRSF PIRSF016660 1 311 1.0E-116 T 11-10-2018 IPR008526 Inner membrane protein YedI AL543_00545 78ae00d2a3dc8d3b4cb434d1b6ea630d 311 Pfam PF05661 Protein of unknown function (DUF808) 4 302 3.1E-112 T 11-10-2018 IPR008526 Inner membrane protein YedI AL543_01800 363f7eecf00e12facf652bea8ad7abeb 173 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 26 157 4.4E-29 T 11-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ AL543_17200 16e920f82aa32dd3ab4fab489a9e64b1 503 PRINTS PR00067 Catalase signature 336 362 1.4E-69 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AL543_17200 16e920f82aa32dd3ab4fab489a9e64b1 503 PRINTS PR00067 Catalase signature 101 119 1.4E-69 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AL543_17200 16e920f82aa32dd3ab4fab489a9e64b1 503 PRINTS PR00067 Catalase signature 141 159 1.4E-69 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AL543_17200 16e920f82aa32dd3ab4fab489a9e64b1 503 PRINTS PR00067 Catalase signature 38 61 1.4E-69 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AL543_17200 16e920f82aa32dd3ab4fab489a9e64b1 503 PRINTS PR00067 Catalase signature 304 331 1.4E-69 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AL543_17200 16e920f82aa32dd3ab4fab489a9e64b1 503 PRINTS PR00067 Catalase signature 122 139 1.4E-69 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AL543_17200 16e920f82aa32dd3ab4fab489a9e64b1 503 ProSitePatterns PS00438 Catalase proximal active site signature. 61 77 - T 11-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AL543_17200 16e920f82aa32dd3ab4fab489a9e64b1 503 Pfam PF00199 Catalase 25 401 1.7E-168 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AL543_17200 16e920f82aa32dd3ab4fab489a9e64b1 503 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 349 357 - T 11-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AL543_17200 16e920f82aa32dd3ab4fab489a9e64b1 503 Gene3D G3DSA:2.40.180.10 21 503 5.3E-207 T 11-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 AL543_17200 16e920f82aa32dd3ab4fab489a9e64b1 503 SMART SM01060 25 406 2.1E-244 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AL543_17200 16e920f82aa32dd3ab4fab489a9e64b1 503 PIRSF PIRSF038928 16 496 3.9E-189 T 11-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AL543_17200 16e920f82aa32dd3ab4fab489a9e64b1 503 Pfam PF06628 Catalase-related immune-responsive 431 489 3.3E-20 T 11-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AL543_17200 16e920f82aa32dd3ab4fab489a9e64b1 503 SUPERFAMILY SSF56634 20 499 1.83E-192 T 11-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AL543_01145 f9e5faa29cf6d329783dd0aa9f5ad1f9 636 SMART SM00267 226 393 1.7E-12 T 11-10-2018 IPR000160 GGDEF domain AL543_01145 f9e5faa29cf6d329783dd0aa9f5ad1f9 636 SUPERFAMILY SSF141868 411 635 6.67E-41 T 11-10-2018 IPR035919 EAL domain superfamily AL543_01145 f9e5faa29cf6d329783dd0aa9f5ad1f9 636 SUPERFAMILY SSF55073 244 386 7.85E-16 T 11-10-2018 IPR029787 Nucleotide cyclase AL543_01145 f9e5faa29cf6d329783dd0aa9f5ad1f9 636 SMART SM00052 403 635 5.6E-11 T 11-10-2018 IPR001633 EAL domain AL543_01145 f9e5faa29cf6d329783dd0aa9f5ad1f9 636 Gene3D G3DSA:3.30.1040.50 102 151 1.5E-17 T 11-10-2018 AL543_01145 f9e5faa29cf6d329783dd0aa9f5ad1f9 636 Gene3D G3DSA:3.20.20.450 401 636 1.1E-40 T 11-10-2018 IPR035919 EAL domain superfamily AL543_01145 f9e5faa29cf6d329783dd0aa9f5ad1f9 636 Gene3D G3DSA:3.30.70.270 223 391 2.5E-20 T 11-10-2018 AL543_01145 f9e5faa29cf6d329783dd0aa9f5ad1f9 636 Pfam PF00563 EAL domain 411 634 2.0E-38 T 11-10-2018 IPR001633 EAL domain AL543_01145 f9e5faa29cf6d329783dd0aa9f5ad1f9 636 Pfam PF00990 Diguanylate cyclase, GGDEF domain 237 385 1.1E-12 T 11-10-2018 IPR000160 GGDEF domain AL543_01145 f9e5faa29cf6d329783dd0aa9f5ad1f9 636 Pfam PF16448 LapD/MoxY periplasmic domain 23 146 6.1E-38 T 11-10-2018 IPR032244 LapD/MoxY, periplasmic domain AL543_12595 c1b6c41f8b6761c53966459fbc57f09e 558 SUPERFAMILY SSF55781 227 351 1.26E-7 T 11-10-2018 AL543_12595 c1b6c41f8b6761c53966459fbc57f09e 558 Pfam PF13492 GAF domain 252 351 1.1E-6 T 11-10-2018 IPR003018 GAF domain GO:0005515 AL543_12595 c1b6c41f8b6761c53966459fbc57f09e 558 Gene3D G3DSA:3.30.450.40 226 352 3.2E-6 T 11-10-2018 IPR029016 GAF-like domain superfamily AL543_12595 c1b6c41f8b6761c53966459fbc57f09e 558 Pfam PF07694 5TMR of 5TMR-LYT 25 193 5.9E-59 T 11-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 AL543_12595 c1b6c41f8b6761c53966459fbc57f09e 558 Gene3D G3DSA:3.30.565.10 418 555 1.6E-12 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_12595 c1b6c41f8b6761c53966459fbc57f09e 558 SUPERFAMILY SSF55874 420 553 1.55E-9 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_12595 c1b6c41f8b6761c53966459fbc57f09e 558 Pfam PF06580 Histidine kinase 366 444 4.0E-27 T 11-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 AL543_08440 a3f2e34d1ebcdab10614d3ddddbcd664 286 Pfam PF00156 Phosphoribosyl transferase domain 190 280 4.5E-9 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AL543_08440 a3f2e34d1ebcdab10614d3ddddbcd664 286 Gene3D G3DSA:3.40.50.2020 148 284 5.0E-16 T 11-10-2018 AL543_08440 a3f2e34d1ebcdab10614d3ddddbcd664 286 SUPERFAMILY SSF53271 103 281 8.88E-38 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AL543_08180 f073341f6f001e04878c02771d7bf672 119 Pfam PF11333 Protein of unknown function (DUF3135) 14 93 1.8E-34 T 11-10-2018 IPR021482 Protein of unknown function DUF3135 AL543_08215 a2c8ffd03df4512642f82809c4bbfc19 443 SMART SM01086 335 429 2.1E-19 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AL543_08215 a2c8ffd03df4512642f82809c4bbfc19 443 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 335 404 4.6E-5 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AL543_08215 a2c8ffd03df4512642f82809c4bbfc19 443 SMART SM00382 49 332 1.3E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_08215 a2c8ffd03df4512642f82809c4bbfc19 443 Gene3D G3DSA:1.10.8.60 335 440 7.5E-40 T 11-10-2018 AL543_08215 a2c8ffd03df4512642f82809c4bbfc19 443 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 443 43.15 T 11-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 AL543_08215 a2c8ffd03df4512642f82809c4bbfc19 443 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 101 8.1E-7 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL543_08215 a2c8ffd03df4512642f82809c4bbfc19 443 Pfam PF07724 AAA domain (Cdc48 subfamily) 173 329 8.4E-43 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL543_08215 a2c8ffd03df4512642f82809c4bbfc19 443 SUPERFAMILY SSF52540 3 441 9.34E-96 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_08215 a2c8ffd03df4512642f82809c4bbfc19 443 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 443 4.6E-222 T 11-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 AL543_01345 465fd8b53c9f45041889fdb54c64caf3 291 Gene3D G3DSA:1.10.1040.10 163 290 1.0E-34 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL543_01345 465fd8b53c9f45041889fdb54c64caf3 291 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 284 9.0E-29 T 11-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AL543_01345 465fd8b53c9f45041889fdb54c64caf3 291 Gene3D G3DSA:3.40.50.720 1 162 2.6E-50 T 11-10-2018 AL543_01345 465fd8b53c9f45041889fdb54c64caf3 291 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 159 1.3E-48 T 11-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 AL543_01345 465fd8b53c9f45041889fdb54c64caf3 291 SUPERFAMILY SSF48179 164 289 4.19E-36 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AL543_01345 465fd8b53c9f45041889fdb54c64caf3 291 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 11-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 AL543_01345 465fd8b53c9f45041889fdb54c64caf3 291 PIRSF PIRSF000103 1 291 5.6E-74 T 11-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 AL543_01345 465fd8b53c9f45041889fdb54c64caf3 291 SUPERFAMILY SSF51735 1 163 1.83E-51 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_02000 203994a3529328641dd13962a47a09ac 209 SUPERFAMILY SSF53474 3 173 3.11E-15 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL543_14880 7ffcd9f3366efb35331ef3b153a3338e 238 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 9 219 28.7 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AL543_14880 7ffcd9f3366efb35331ef3b153a3338e 238 SUPERFAMILY SSF52540 8 223 7.36E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_14880 7ffcd9f3366efb35331ef3b153a3338e 238 PIRSF PIRSF006755 8 235 4.4E-72 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AL543_14880 7ffcd9f3366efb35331ef3b153a3338e 238 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 13 183 3.4E-52 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AL543_14880 7ffcd9f3366efb35331ef3b153a3338e 238 Pfam PF13500 AAA domain 11 219 2.1E-37 T 11-10-2018 AL543_14880 7ffcd9f3366efb35331ef3b153a3338e 238 Gene3D G3DSA:3.40.50.300 10 231 2.9E-65 T 11-10-2018 AL543_00045 145b466bede125d9e9d613b03f35cf05 361 SUPERFAMILY SSF58104 38 243 1.29E-43 T 11-10-2018 AL543_00045 145b466bede125d9e9d613b03f35cf05 361 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 69 98 1.7E-9 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL543_00045 145b466bede125d9e9d613b03f35cf05 361 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 216 245 1.7E-9 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL543_00045 145b466bede125d9e9d613b03f35cf05 361 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 168 197 1.7E-9 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL543_00045 145b466bede125d9e9d613b03f35cf05 361 Pfam PF13682 Chemoreceptor zinc-binding domain 258 322 4.9E-15 T 11-10-2018 IPR025991 Chemoreceptor zinc-binding domain AL543_00045 145b466bede125d9e9d613b03f35cf05 361 SMART SM00283 41 282 5.0E-16 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_00045 145b466bede125d9e9d613b03f35cf05 361 Gene3D G3DSA:1.10.287.950 4 252 5.8E-43 T 11-10-2018 AL543_00045 145b466bede125d9e9d613b03f35cf05 361 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 120 242 6.9E-30 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_15130 96cc3bca58ce8de740de5491dc6f01d7 323 Gene3D G3DSA:3.40.50.150 83 293 6.3E-25 T 11-10-2018 AL543_15130 96cc3bca58ce8de740de5491dc6f01d7 323 SUPERFAMILY SSF53335 91 323 9.8E-36 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL543_15130 96cc3bca58ce8de740de5491dc6f01d7 323 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 13 322 53.986 T 11-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 AL543_15130 96cc3bca58ce8de740de5491dc6f01d7 323 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 9 321 2.4E-146 T 11-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 AL543_15130 96cc3bca58ce8de740de5491dc6f01d7 323 Pfam PF08003 Protein of unknown function (DUF1698) 7 322 1.9E-172 T 11-10-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like AL543_03655 7133520d1107153c1e0ede068addaa5e 73 Pfam PF04964 Flp/Fap pilin component 21 65 2.2E-11 T 11-10-2018 IPR007047 Flp/Fap pilin component AL543_09950 9fa6b35e7079d703ec71c6c6488cc3af 105 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 28 77 7.2E-6 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL543_09950 9fa6b35e7079d703ec71c6c6488cc3af 105 Gene3D G3DSA:1.10.260.40 18 91 1.2E-8 T 11-10-2018 AL543_09950 9fa6b35e7079d703ec71c6c6488cc3af 105 SUPERFAMILY SSF47413 20 78 2.73E-9 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL543_03145 df34e33a6476ad8cedcefa4f8250ed69 477 Gene3D G3DSA:3.50.50.60 5 105 1.1E-8 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_03145 df34e33a6476ad8cedcefa4f8250ed69 477 SUPERFAMILY SSF51905 5 275 1.02E-20 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_03145 df34e33a6476ad8cedcefa4f8250ed69 477 Pfam PF01266 FAD dependent oxidoreductase 10 376 3.9E-14 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL543_09335 6a5f7942f70522b644a0e8701bbd0fa9 381 SUPERFAMILY SSF52540 13 234 7.98E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_09335 6a5f7942f70522b644a0e8701bbd0fa9 381 Gene3D G3DSA:3.40.50.300 38 248 2.3E-6 T 11-10-2018 AL543_09335 6a5f7942f70522b644a0e8701bbd0fa9 381 Pfam PF13166 AAA domain 150 342 1.2E-13 T 11-10-2018 IPR026866 Protein CR006, P-loop domain AL543_19585 5bffdb1eecf8bf74b1fc92312e1e6de7 159 Pfam PF03100 CcmE 4 135 2.3E-45 T 11-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 AL543_19585 5bffdb1eecf8bf74b1fc92312e1e6de7 159 SUPERFAMILY SSF82093 30 141 3.79E-39 T 11-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 AL543_19585 5bffdb1eecf8bf74b1fc92312e1e6de7 159 Gene3D G3DSA:2.40.50.140 30 141 9.6E-41 T 11-10-2018 AL543_19585 5bffdb1eecf8bf74b1fc92312e1e6de7 159 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 145 32.541 T 11-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 AL543_15645 ffbfc9eaf36e5e70af2537fddebea18d 327 SUPERFAMILY SSF52821 94 237 1.0E-30 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AL543_15645 ffbfc9eaf36e5e70af2537fddebea18d 327 SMART SM00450 113 214 1.6E-21 T 11-10-2018 IPR001763 Rhodanese-like domain AL543_15645 ffbfc9eaf36e5e70af2537fddebea18d 327 Hamap MF_00469 UPF0176 protein YceA [yceA]. 2 254 44.867 T 11-10-2018 IPR020936 Uncharacterised protein family UPF0176 AL543_15645 ffbfc9eaf36e5e70af2537fddebea18d 327 Pfam PF00581 Rhodanese-like domain 117 210 5.4E-8 T 11-10-2018 IPR001763 Rhodanese-like domain AL543_15645 ffbfc9eaf36e5e70af2537fddebea18d 327 Gene3D G3DSA:3.40.250.10 97 253 1.1E-50 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AL543_15645 ffbfc9eaf36e5e70af2537fddebea18d 327 Gene3D G3DSA:3.30.70.100 1 96 2.6E-32 T 11-10-2018 AL543_21050 e479bf1e572c00a9d694d3cbf43baa72 44 Pfam PF04875 Protein of unknown function, DUF645 1 44 2.6E-29 T 11-10-2018 IPR006959 Protein of unknown function DUF645 AL543_14485 a005662aab7a4e7b8637d5518e40e20d 300 Gene3D G3DSA:1.10.287.950 17 300 3.6E-44 T 11-10-2018 AL543_14485 a005662aab7a4e7b8637d5518e40e20d 300 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 89 271 4.9E-34 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_14485 a005662aab7a4e7b8637d5518e40e20d 300 SMART SM00283 53 300 3.9E-23 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_14485 a005662aab7a4e7b8637d5518e40e20d 300 SUPERFAMILY SSF58104 42 297 5.23E-46 T 11-10-2018 AL543_01555 72b53afbe053e57a88c98d4732a1f27c 322 Pfam PF08349 Protein of unknown function (DUF1722) 197 313 2.3E-43 T 11-10-2018 IPR013560 Domain of unknown function DUF1722 AL543_01555 72b53afbe053e57a88c98d4732a1f27c 322 PIRSF PIRSF037004 4 322 3.6E-138 T 11-10-2018 IPR017087 Uncharacterised conserved protein UCP037004 AL543_01555 72b53afbe053e57a88c98d4732a1f27c 322 Pfam PF04463 Protein of unknown function (DUF523) 13 154 3.9E-39 T 11-10-2018 IPR007553 Domain of unknown function DUF523 AL543_16235 f30791bf123b165f8a97fcb3463478f2 176 SUPERFAMILY SSF53098 3 175 1.77E-28 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_16235 f30791bf123b165f8a97fcb3463478f2 176 Gene3D G3DSA:3.30.420.10 1 176 1.6E-37 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AL543_16235 f30791bf123b165f8a97fcb3463478f2 176 SMART SM00479 5 176 7.1E-4 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL543_16235 f30791bf123b165f8a97fcb3463478f2 176 Pfam PF00929 Exonuclease 7 171 1.7E-11 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL543_13625 f8963666396819371728f697795458e7 753 Gene3D G3DSA:1.25.40.10 362 467 1.1E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_13625 f8963666396819371728f697795458e7 753 SUPERFAMILY SSF48452 157 358 2.48E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_13625 f8963666396819371728f697795458e7 753 Gene3D G3DSA:1.25.40.10 283 361 1.3E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_13625 f8963666396819371728f697795458e7 753 SMART SM00028 249 282 16.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL543_13625 f8963666396819371728f697795458e7 753 SMART SM00028 289 322 2.3E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL543_13625 f8963666396819371728f697795458e7 753 SMART SM00028 83 116 44.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL543_13625 f8963666396819371728f697795458e7 753 SMART SM00028 329 362 57.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL543_13625 f8963666396819371728f697795458e7 753 SMART SM00028 409 442 48.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL543_13625 f8963666396819371728f697795458e7 753 Gene3D G3DSA:1.25.40.10 33 282 3.1E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_16400 d5be8bf310b28a5dd0ad6defcc2f678f 141 SMART SM00347 25 125 4.1E-20 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL543_16400 d5be8bf310b28a5dd0ad6defcc2f678f 141 Pfam PF01047 MarR family 32 89 5.1E-13 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL543_16400 d5be8bf310b28a5dd0ad6defcc2f678f 141 SUPERFAMILY SSF46785 4 138 1.34E-27 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_16400 d5be8bf310b28a5dd0ad6defcc2f678f 141 ProSitePatterns PS01117 MarR-type HTH domain signature. 64 98 - T 11-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AL543_16400 d5be8bf310b28a5dd0ad6defcc2f678f 141 Gene3D G3DSA:1.10.10.10 1 137 1.7E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_16400 d5be8bf310b28a5dd0ad6defcc2f678f 141 TIGRFAM TIGR02337 HpaR: homoprotocatechuate degradation operon regulator, HpaR 7 136 2.8E-56 T 11-10-2018 IPR012712 Homoprotocatechuate degradation transcriptional regulator HpaR GO:0003677|GO:0010124|GO:0045892 AL543_14620 14ef0d0c17b81a698c95b7ea745af04b 435 Gene3D G3DSA:1.10.400.20 288 411 1.1E-170 T 11-10-2018 AL543_14620 14ef0d0c17b81a698c95b7ea745af04b 435 TIGRFAM TIGR02810 agaZ_gatZ: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit 6 424 2.6E-207 T 11-10-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 AL543_14620 14ef0d0c17b81a698c95b7ea745af04b 435 PIRSF PIRSF009264 1 430 8.1E-200 T 11-10-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 AL543_14620 14ef0d0c17b81a698c95b7ea745af04b 435 Pfam PF08013 Tagatose 6 phosphate kinase 4 424 1.9E-192 T 11-10-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 AL543_14620 14ef0d0c17b81a698c95b7ea745af04b 435 Gene3D G3DSA:3.20.20.70 8 416 1.1E-170 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_14620 14ef0d0c17b81a698c95b7ea745af04b 435 SUPERFAMILY SSF51569 4 424 3.66E-162 T 11-10-2018 AL543_03685 22f0ac8b6eab8a2f1f20f143c1f59219 303 Pfam PF00482 Type II secretion system (T2SS), protein F 136 260 1.8E-16 T 11-10-2018 IPR018076 Type II secretion system F domain AL543_13255 8dd07567403b1f6677da2932adde5d4d 448 Pfam PF03390 2-hydroxycarboxylate transporter family 25 442 3.5E-148 T 11-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 AL543_13255 8dd07567403b1f6677da2932adde5d4d 448 PIRSF PIRSF005348 1 448 5.0E-163 T 11-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 AL543_12560 ea5aaa2d3a1ef161740cfd8922122872 494 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 328 436 1.9E-21 T 11-10-2018 IPR025299 CstA, C-terminal domain AL543_12560 ea5aaa2d3a1ef161740cfd8922122872 494 Pfam PF02554 Carbon starvation protein CstA 5 144 5.8E-33 T 11-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 AL543_12560 ea5aaa2d3a1ef161740cfd8922122872 494 Pfam PF02554 Carbon starvation protein CstA 147 294 7.0E-20 T 11-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 AL543_08015 5f43cdab4d36656eadf4a07140ea7779 172 Gene3D G3DSA:2.30.30.830 79 172 4.9E-25 T 11-10-2018 AL543_08015 5f43cdab4d36656eadf4a07140ea7779 172 PIRSF PIRSF016481 1 172 6.4E-67 T 11-10-2018 IPR007446 Pilus assembly protein PilP AL543_08015 5f43cdab4d36656eadf4a07140ea7779 172 Pfam PF04351 Pilus assembly protein, PilP 25 171 3.2E-44 T 11-10-2018 IPR007446 Pilus assembly protein PilP AL543_01630 36f386488dc5b45ab277a13597b6e9f1 110 Gene3D G3DSA:2.60.40.10 15 110 1.9E-15 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL543_01630 36f386488dc5b45ab277a13597b6e9f1 110 SUPERFAMILY SSF81296 23 106 6.53E-13 T 11-10-2018 IPR014756 Immunoglobulin E-set AL543_00465 b4a9e8a0ff986eccf3d8d401eea46bdf 153 Gene3D G3DSA:1.10.357.10 1 153 1.1E-62 T 11-10-2018 AL543_00465 b4a9e8a0ff986eccf3d8d401eea46bdf 153 SUPERFAMILY SSF46689 1 74 2.21E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_00465 b4a9e8a0ff986eccf3d8d401eea46bdf 153 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 1.1E-4 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL543_02125 c027c471bdec51ecdb42cf28f5c8cedd 528 Gene3D G3DSA:1.10.10.60 472 527 1.4E-11 T 11-10-2018 AL543_02125 c027c471bdec51ecdb42cf28f5c8cedd 528 SMART SM00382 213 356 5.3E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_02125 c027c471bdec51ecdb42cf28f5c8cedd 528 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 217 230 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL543_02125 c027c471bdec51ecdb42cf28f5c8cedd 528 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 279 294 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL543_02125 c027c471bdec51ecdb42cf28f5c8cedd 528 SUPERFAMILY SSF46689 473 525 2.62E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_02125 c027c471bdec51ecdb42cf28f5c8cedd 528 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 489 506 8.9E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL543_02125 c027c471bdec51ecdb42cf28f5c8cedd 528 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 506 526 8.9E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL543_02125 c027c471bdec51ecdb42cf28f5c8cedd 528 Pfam PF02954 Bacterial regulatory protein, Fis family 483 519 2.4E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL543_02125 c027c471bdec51ecdb42cf28f5c8cedd 528 SUPERFAMILY SSF52540 193 430 3.99E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_02125 c027c471bdec51ecdb42cf28f5c8cedd 528 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 406 415 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AL543_02125 c027c471bdec51ecdb42cf28f5c8cedd 528 Pfam PF00158 Sigma-54 interaction domain 193 359 7.4E-68 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL543_02125 c027c471bdec51ecdb42cf28f5c8cedd 528 Gene3D G3DSA:1.10.8.60 365 442 5.6E-15 T 11-10-2018 AL543_02125 c027c471bdec51ecdb42cf28f5c8cedd 528 Gene3D G3DSA:3.40.50.300 180 364 1.3E-61 T 11-10-2018 AL543_00790 bee5cc461d545f9b8482435f06f1ebc6 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.2E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_00790 bee5cc461d545f9b8482435f06f1ebc6 299 Pfam PF03466 LysR substrate binding domain 88 291 1.2E-42 T 11-10-2018 IPR005119 LysR, substrate-binding AL543_00790 bee5cc461d545f9b8482435f06f1ebc6 299 SUPERFAMILY SSF53850 88 292 6.38E-44 T 11-10-2018 AL543_00790 bee5cc461d545f9b8482435f06f1ebc6 299 Gene3D G3DSA:3.40.190.290 90 292 2.5E-62 T 11-10-2018 AL543_00790 bee5cc461d545f9b8482435f06f1ebc6 299 Gene3D G3DSA:1.10.10.10 1 84 2.1E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_00790 bee5cc461d545f9b8482435f06f1ebc6 299 SUPERFAMILY SSF46785 1 87 6.15E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_15970 8ea9d430bf25a7b43be8b58b8c51086d 155 Gene3D G3DSA:3.30.420.130 4 109 2.6E-13 T 11-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily AL543_15970 8ea9d430bf25a7b43be8b58b8c51086d 155 SUPERFAMILY SSF53146 2 101 5.89E-17 T 11-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily AL543_15970 8ea9d430bf25a7b43be8b58b8c51086d 155 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 15 98 1.6E-10 T 11-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis AL543_12400 74e80f8a673af8652bc057f6812b453f 183 Gene3D G3DSA:3.40.630.30 8 183 2.4E-49 T 11-10-2018 AL543_12400 74e80f8a673af8652bc057f6812b453f 183 SUPERFAMILY SSF55729 17 147 7.89E-28 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL543_12400 74e80f8a673af8652bc057f6812b453f 183 Pfam PF13527 Acetyltransferase (GNAT) domain 19 139 2.3E-10 T 11-10-2018 AL543_03795 d0905efcd5ec73583656261da2de87de 456 Gene3D G3DSA:3.30.1330.90 10 157 1.3E-51 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 AL543_03795 d0905efcd5ec73583656261da2de87de 456 SUPERFAMILY SSF143548 16 155 2.88E-44 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 AL543_03795 d0905efcd5ec73583656261da2de87de 456 Pfam PF03315 Serine dehydratase beta chain 3 153 5.9E-54 T 11-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AL543_03795 d0905efcd5ec73583656261da2de87de 456 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 448 1.4E-201 T 11-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AL543_03795 d0905efcd5ec73583656261da2de87de 456 Pfam PF03313 Serine dehydratase alpha chain 182 447 6.8E-96 T 11-10-2018 IPR005130 Serine dehydratase-like, alpha subunit AL543_15785 d5a2c54ae832e02a4d96824adae42a65 338 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 8.5E-18 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL543_15785 d5a2c54ae832e02a4d96824adae42a65 338 Gene3D G3DSA:3.40.50.2300 160 289 3.8E-67 T 11-10-2018 AL543_15785 d5a2c54ae832e02a4d96824adae42a65 338 Gene3D G3DSA:1.10.260.40 1 54 5.5E-21 T 11-10-2018 AL543_15785 d5a2c54ae832e02a4d96824adae42a65 338 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.5E-5 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL543_15785 d5a2c54ae832e02a4d96824adae42a65 338 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.5E-5 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL543_15785 d5a2c54ae832e02a4d96824adae42a65 338 Pfam PF13377 Periplasmic binding protein-like domain 168 323 1.4E-29 T 11-10-2018 AL543_15785 d5a2c54ae832e02a4d96824adae42a65 338 SUPERFAMILY SSF53822 61 321 4.28E-67 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AL543_15785 d5a2c54ae832e02a4d96824adae42a65 338 Gene3D G3DSA:3.40.50.2300 55 305 3.8E-67 T 11-10-2018 AL543_15785 d5a2c54ae832e02a4d96824adae42a65 338 SMART SM00354 1 71 6.2E-28 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL543_15785 d5a2c54ae832e02a4d96824adae42a65 338 SUPERFAMILY SSF47413 2 59 2.28E-16 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL543_16840 77d08b1dd5da91bc3822197601f45de9 202 Gene3D G3DSA:3.30.70.20 5 180 5.6E-34 T 11-10-2018 AL543_16840 77d08b1dd5da91bc3822197601f45de9 202 Pfam PF13247 4Fe-4S dicluster domain 54 125 2.5E-10 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL543_16840 77d08b1dd5da91bc3822197601f45de9 202 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL543_16840 77d08b1dd5da91bc3822197601f45de9 202 Gene3D G3DSA:3.30.70.20 63 120 5.6E-34 T 11-10-2018 AL543_16840 77d08b1dd5da91bc3822197601f45de9 202 SUPERFAMILY SSF54862 1 183 3.56E-48 T 11-10-2018 AL543_14730 0973b6ab4fdb1a3dbac47490e4479e0e 194 SUPERFAMILY SSF103039 4 190 2.22E-31 T 11-10-2018 IPR028976 CheC-like superfamily AL543_14730 0973b6ab4fdb1a3dbac47490e4479e0e 194 Gene3D G3DSA:3.40.1550.10 3 190 8.0E-32 T 11-10-2018 IPR028976 CheC-like superfamily AL543_14730 0973b6ab4fdb1a3dbac47490e4479e0e 194 Pfam PF04509 CheC-like family 9 43 5.5E-12 T 11-10-2018 IPR007597 CheC-like protein GO:0016787 AL543_21405 6df25d195997d1ad8652c9655843ce69 55 Pfam PF11665 Protein of unknown function (DUF3265) 22 49 1.9E-14 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL543_05160 f43ad4c0139accb0577d7ad2848e63fc 44 Pfam PF04875 Protein of unknown function, DUF645 1 44 1.6E-29 T 11-10-2018 IPR006959 Protein of unknown function DUF645 AL543_06230 db8f42f544495b8862853fc2d112e97a 490 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 14 486 1.4E-183 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AL543_06230 db8f42f544495b8862853fc2d112e97a 490 SUPERFAMILY SSF53187 15 486 3.28E-62 T 11-10-2018 AL543_06230 db8f42f544495b8862853fc2d112e97a 490 Pfam PF07687 Peptidase dimerisation domain 212 296 1.8E-7 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain AL543_06230 db8f42f544495b8862853fc2d112e97a 490 PRINTS PR00934 X-His dipeptidase (M25) signature 367 385 2.1E-89 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AL543_06230 db8f42f544495b8862853fc2d112e97a 490 PRINTS PR00934 X-His dipeptidase (M25) signature 163 181 2.1E-89 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AL543_06230 db8f42f544495b8862853fc2d112e97a 490 PRINTS PR00934 X-His dipeptidase (M25) signature 84 103 2.1E-89 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AL543_06230 db8f42f544495b8862853fc2d112e97a 490 PRINTS PR00934 X-His dipeptidase (M25) signature 210 227 2.1E-89 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AL543_06230 db8f42f544495b8862853fc2d112e97a 490 PRINTS PR00934 X-His dipeptidase (M25) signature 454 476 2.1E-89 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AL543_06230 db8f42f544495b8862853fc2d112e97a 490 PRINTS PR00934 X-His dipeptidase (M25) signature 255 274 2.1E-89 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AL543_06230 db8f42f544495b8862853fc2d112e97a 490 PRINTS PR00934 X-His dipeptidase (M25) signature 105 123 2.1E-89 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AL543_06230 db8f42f544495b8862853fc2d112e97a 490 PRINTS PR00934 X-His dipeptidase (M25) signature 432 448 2.1E-89 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AL543_06230 db8f42f544495b8862853fc2d112e97a 490 PRINTS PR00934 X-His dipeptidase (M25) signature 139 156 2.1E-89 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AL543_06230 db8f42f544495b8862853fc2d112e97a 490 Pfam PF01546 Peptidase family M20/M25/M40 77 472 1.4E-20 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 AL543_06230 db8f42f544495b8862853fc2d112e97a 490 PIRSF PIRSF016599 5 489 3.2E-220 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AL543_06230 db8f42f544495b8862853fc2d112e97a 490 Gene3D G3DSA:3.40.630.10 381 490 4.7E-23 T 11-10-2018 AL543_06230 db8f42f544495b8862853fc2d112e97a 490 Gene3D G3DSA:3.40.630.10 1 226 5.3E-63 T 11-10-2018 AL543_09210 c937a3f582e2806fcaa3347944e9381b 261 Gene3D G3DSA:3.40.50.150 57 260 8.1E-77 T 11-10-2018 AL543_09210 c937a3f582e2806fcaa3347944e9381b 261 Pfam PF04445 Putative SAM-dependent methyltransferase 19 254 1.1E-107 T 11-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 AL543_09210 c937a3f582e2806fcaa3347944e9381b 261 Gene3D G3DSA:3.40.1630.10 2 56 2.1E-19 T 11-10-2018 AL543_09210 c937a3f582e2806fcaa3347944e9381b 261 SUPERFAMILY SSF53335 4 255 1.75E-76 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL543_09210 c937a3f582e2806fcaa3347944e9381b 261 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 3 256 39.249 T 11-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 AL543_02640 12b9fd478497a80b45923144960242e7 162 Pfam PF06891 P2 phage tail completion protein R (GpR) 8 140 3.1E-20 T 11-10-2018 IPR009678 Bacteriophage tail completion protein R AL543_12410 0c35201e77000773be841aa7eddd940a 161 Gene3D G3DSA:3.40.630.30 17 160 1.1E-39 T 11-10-2018 AL543_12410 0c35201e77000773be841aa7eddd940a 161 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 25 156 4.5E-39 T 11-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 AL543_12410 0c35201e77000773be841aa7eddd940a 161 Pfam PF00583 Acetyltransferase (GNAT) family 29 133 7.4E-15 T 11-10-2018 IPR000182 GNAT domain AL543_12410 0c35201e77000773be841aa7eddd940a 161 SUPERFAMILY SSF55729 14 158 4.65E-31 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL543_12465 32d6d9c9643f71d496a25e3539c9bfa5 352 Gene3D G3DSA:3.20.20.100 9 352 3.9E-133 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AL543_12465 32d6d9c9643f71d496a25e3539c9bfa5 352 Pfam PF00248 Aldo/keto reductase family 23 343 1.3E-74 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain AL543_12465 32d6d9c9643f71d496a25e3539c9bfa5 352 SUPERFAMILY SSF51430 9 352 5.37E-109 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AL543_04495 11e3f166b3fcbf7b8fc8f9fa7c478e89 191 Pfam PF03831 PhnA domain 126 190 4.5E-25 T 11-10-2018 IPR013988 PhnA protein, C-terminal AL543_04495 11e3f166b3fcbf7b8fc8f9fa7c478e89 191 Gene3D G3DSA:2.30.30.40 122 191 4.6E-26 T 11-10-2018 AL543_04495 11e3f166b3fcbf7b8fc8f9fa7c478e89 191 Pfam PF08274 PhnA Zinc-Ribbon 16 55 3.7E-9 T 11-10-2018 IPR013987 PhnA protein, N-terminal AL543_04495 11e3f166b3fcbf7b8fc8f9fa7c478e89 191 SMART SM00782 9 55 4.9E-28 T 11-10-2018 IPR013991 PhnA protein N-terminal, proteobacterial AL543_04495 11e3f166b3fcbf7b8fc8f9fa7c478e89 191 SUPERFAMILY SSF82057 120 190 1.56E-22 T 11-10-2018 AL543_00815 c3e8194cad4655ff90663ee51db7ef8a 277 Pfam PF03618 Kinase/pyrophosphorylase 10 267 1.4E-73 T 11-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 AL543_00815 c3e8194cad4655ff90663ee51db7ef8a 277 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 7 276 66.235 T 11-10-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein AL543_05480 87a99c4d2b3b4df5928437a800eab481 115 Pfam PF11225 Protein of unknown function (DUF3024) 59 114 5.0E-24 T 11-10-2018 IPR021388 Bacteriophage 933W, L0084 AL543_19430 5cd2a116fde81657944cc4a7ea8ab596 519 Pfam PF00916 Sulfate permease family 13 374 7.1E-56 T 11-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AL543_19430 5cd2a116fde81657944cc4a7ea8ab596 519 SUPERFAMILY SSF52091 415 497 4.91E-11 T 11-10-2018 IPR036513 STAS domain superfamily AL543_19430 5cd2a116fde81657944cc4a7ea8ab596 519 Gene3D G3DSA:3.30.750.24 408 499 2.4E-27 T 11-10-2018 IPR036513 STAS domain superfamily AL543_19430 5cd2a116fde81657944cc4a7ea8ab596 519 Pfam PF01740 STAS domain 416 511 6.5E-6 T 11-10-2018 IPR002645 STAS domain AL543_01235 f67dab51048be36ded4f4357ce869c39 320 Gene3D G3DSA:1.10.3720.10 89 304 7.1E-19 T 11-10-2018 IPR035906 MetI-like superfamily AL543_01235 f67dab51048be36ded4f4357ce869c39 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 309 7.7E-36 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL543_01235 f67dab51048be36ded4f4357ce869c39 320 SUPERFAMILY SSF161098 96 295 3.01E-14 T 11-10-2018 IPR035906 MetI-like superfamily AL543_19330 141260f6e2ef3365e329bb8d1d54a44b 486 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 27 41 - T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL543_19330 141260f6e2ef3365e329bb8d1d54a44b 486 SUPERFAMILY SSF161070 3 475 3.66E-149 T 11-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 AL543_19330 141260f6e2ef3365e329bb8d1d54a44b 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 11 32 5.8E-36 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL543_19330 141260f6e2ef3365e329bb8d1d54a44b 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 40 59 5.8E-36 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL543_19330 141260f6e2ef3365e329bb8d1d54a44b 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 84 110 5.8E-36 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL543_19330 141260f6e2ef3365e329bb8d1d54a44b 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 388 408 5.8E-36 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL543_19330 141260f6e2ef3365e329bb8d1d54a44b 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 257 277 5.8E-36 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL543_19330 141260f6e2ef3365e329bb8d1d54a44b 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 311 330 5.8E-36 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL543_19330 141260f6e2ef3365e329bb8d1d54a44b 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 428 448 5.8E-36 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL543_19330 141260f6e2ef3365e329bb8d1d54a44b 486 Pfam PF00209 Sodium:neurotransmitter symporter family 121 472 4.1E-79 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL543_05745 dbc78194ad8c10e8024d9edeeac6fbe9 495 SUPERFAMILY SSF53649 2 474 1.57E-82 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AL543_05745 dbc78194ad8c10e8024d9edeeac6fbe9 495 Pfam PF00884 Sulfatase 4 356 1.4E-51 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 AL543_05745 dbc78194ad8c10e8024d9edeeac6fbe9 495 Gene3D G3DSA:3.40.720.10 4 375 3.7E-81 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AL543_05745 dbc78194ad8c10e8024d9edeeac6fbe9 495 Gene3D G3DSA:3.30.1120.10 405 482 1.2E-12 T 11-10-2018 AL543_15360 001090e3e0d8767a7d84152b847305d9 699 Pfam PF02378 Phosphotransferase system, EIIC 31 333 7.7E-19 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL543_15360 001090e3e0d8767a7d84152b847305d9 699 SUPERFAMILY SSF141868 449 688 3.14E-61 T 11-10-2018 IPR035919 EAL domain superfamily AL543_15360 001090e3e0d8767a7d84152b847305d9 699 Pfam PF00563 EAL domain 447 674 2.6E-61 T 11-10-2018 IPR001633 EAL domain AL543_15360 001090e3e0d8767a7d84152b847305d9 699 Gene3D G3DSA:3.20.20.450 445 693 3.2E-67 T 11-10-2018 IPR035919 EAL domain superfamily AL543_15360 001090e3e0d8767a7d84152b847305d9 699 SMART SM00052 440 680 7.3E-68 T 11-10-2018 IPR001633 EAL domain AL543_09015 7e5a9c606d89305cc181a1dda4b4c3b9 278 Gene3D G3DSA:1.20.1540.10 91 277 5.3E-54 T 11-10-2018 IPR035952 Rhomboid-like superfamily AL543_09015 7e5a9c606d89305cc181a1dda4b4c3b9 278 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 86 3.4E-31 T 11-10-2018 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 AL543_09015 7e5a9c606d89305cc181a1dda4b4c3b9 278 SUPERFAMILY SSF144091 97 273 5.23E-43 T 11-10-2018 AL543_09015 7e5a9c606d89305cc181a1dda4b4c3b9 278 Gene3D G3DSA:3.30.70.2350 1 70 1.7E-23 T 11-10-2018 IPR038236 GlpG peptidase, N-terminal domain superfamily AL543_09015 7e5a9c606d89305cc181a1dda4b4c3b9 278 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 4 272 1.2E-115 T 11-10-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 AL543_09015 7e5a9c606d89305cc181a1dda4b4c3b9 278 Pfam PF01694 Rhomboid family 134 273 6.9E-34 T 11-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AL543_14600 5b348b77ff79522dc08cd2fdc76f0763 165 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 111 121 - T 11-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 AL543_14600 5b348b77ff79522dc08cd2fdc76f0763 165 SUPERFAMILY SSF52799 13 162 2.04E-34 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like AL543_14600 5b348b77ff79522dc08cd2fdc76f0763 165 Pfam PF00782 Dual specificity phosphatase, catalytic domain 35 149 3.5E-9 T 11-10-2018 IPR000340 Dual specificity phosphatase, catalytic domain GO:0008138|GO:0016311 AL543_14600 5b348b77ff79522dc08cd2fdc76f0763 165 Gene3D G3DSA:3.90.190.10 5 165 5.0E-33 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like AL543_14405 bc065191dfd68c9e805468329f9fdfa9 83 Pfam PF03692 Putative zinc- or iron-chelating domain 4 61 4.5E-6 T 11-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein AL543_15690 eee0ec35e43006417733809f8970da2b 361 Pfam PF07433 Protein of unknown function (DUF1513) 67 359 2.1E-112 T 11-10-2018 IPR008311 Uncharacterised conserved protein UCP028101 AL543_15690 eee0ec35e43006417733809f8970da2b 361 PIRSF PIRSF028101 4 361 4.2E-159 T 11-10-2018 IPR008311 Uncharacterised conserved protein UCP028101 AL543_15690 eee0ec35e43006417733809f8970da2b 361 SUPERFAMILY SSF50969 59 326 5.81E-12 T 11-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like AL543_15690 eee0ec35e43006417733809f8970da2b 361 Gene3D G3DSA:2.130.10.10 44 225 4.2E-7 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AL543_03415 0d0cf5c153bfd97c6bb195dca1f1444d 132 Gene3D G3DSA:2.40.50.200 25 132 3.7E-19 T 11-10-2018 IPR036700 Bacterial OB-fold superfamily AL543_03415 0d0cf5c153bfd97c6bb195dca1f1444d 132 Pfam PF04076 Bacterial OB fold (BOF) protein 61 130 2.3E-10 T 11-10-2018 IPR005220 Bacterial OB-fold AL543_03415 0d0cf5c153bfd97c6bb195dca1f1444d 132 SUPERFAMILY SSF101756 30 131 5.49E-24 T 11-10-2018 IPR036700 Bacterial OB-fold superfamily AL543_13035 4690319ca38ce275c7135ba2f4bb1c01 289 SUPERFAMILY SSF55186 122 273 4.5E-10 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 AL543_13035 4690319ca38ce275c7135ba2f4bb1c01 289 Gene3D G3DSA:3.30.980.10 122 285 5.5E-5 T 11-10-2018 AL543_13555 71cdbd0b6aae440a9ef6195e333d2518 103 Gene3D G3DSA:1.20.1440.40 1 103 5.5E-28 T 11-10-2018 IPR036814 YqcC-like superfamily AL543_13555 71cdbd0b6aae440a9ef6195e333d2518 103 SUPERFAMILY SSF158452 2 102 2.09E-30 T 11-10-2018 IPR036814 YqcC-like superfamily AL543_13555 71cdbd0b6aae440a9ef6195e333d2518 103 PIRSF PIRSF006257 1 103 2.4E-35 T 11-10-2018 IPR007384 Protein of unknown function UCP006257 AL543_13555 71cdbd0b6aae440a9ef6195e333d2518 103 Pfam PF04287 tRNA pseudouridine synthase C 7 100 6.9E-29 T 11-10-2018 IPR023376 YqcC-like domain AL543_19415 1f72bf4bfeea43202d927d2cced36a0f 316 Gene3D G3DSA:3.10.290.10 7 76 5.4E-16 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AL543_19415 1f72bf4bfeea43202d927d2cced36a0f 316 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 313 1.2E-91 T 11-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL543_19415 1f72bf4bfeea43202d927d2cced36a0f 316 Pfam PF01479 S4 domain 20 66 4.1E-9 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_19415 1f72bf4bfeea43202d927d2cced36a0f 316 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 142 156 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL543_19415 1f72bf4bfeea43202d927d2cced36a0f 316 SMART SM00363 20 80 5.0E-8 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_19415 1f72bf4bfeea43202d927d2cced36a0f 316 Pfam PF00849 RNA pseudouridylate synthase 103 248 1.5E-31 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL543_19415 1f72bf4bfeea43202d927d2cced36a0f 316 SUPERFAMILY SSF55120 97 312 1.6E-65 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL543_19415 1f72bf4bfeea43202d927d2cced36a0f 316 SUPERFAMILY SSF55174 19 71 4.27E-9 T 11-10-2018 AL543_19415 1f72bf4bfeea43202d927d2cced36a0f 316 Gene3D G3DSA:3.30.2350.10 95 316 2.6E-79 T 11-10-2018 AL543_18180 33cade108f69e6df024a41f94a40e3ab 494 SUPERFAMILY SSF53649 4 477 1.31E-75 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AL543_18180 33cade108f69e6df024a41f94a40e3ab 494 Pfam PF00884 Sulfatase 5 322 1.3E-42 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 AL543_18180 33cade108f69e6df024a41f94a40e3ab 494 Gene3D G3DSA:3.40.720.10 4 383 2.2E-69 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AL543_06565 0cac989dde70d07b16e60473993cfaaa 442 SUPERFAMILY SSF54680 337 435 1.83E-28 T 11-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL543_06565 0cac989dde70d07b16e60473993cfaaa 442 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 5 423 2.6E-159 T 11-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL543_06565 0cac989dde70d07b16e60473993cfaaa 442 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 3 426 1.0E-213 T 11-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 AL543_06565 0cac989dde70d07b16e60473993cfaaa 442 Hamap MF_01628 Thymidine phosphorylase [deoA]. 2 437 45.573 T 11-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 AL543_06565 0cac989dde70d07b16e60473993cfaaa 442 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 351 423 1.2E-22 T 11-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL543_06565 0cac989dde70d07b16e60473993cfaaa 442 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 9.9E-21 T 11-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL543_06565 0cac989dde70d07b16e60473993cfaaa 442 Gene3D G3DSA:3.90.1170.30 337 431 6.3E-29 T 11-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL543_06565 0cac989dde70d07b16e60473993cfaaa 442 Gene3D G3DSA:1.20.970.10 7 195 3.9E-127 T 11-10-2018 AL543_06565 0cac989dde70d07b16e60473993cfaaa 442 SUPERFAMILY SSF52418 72 333 3.92E-88 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL543_06565 0cac989dde70d07b16e60473993cfaaa 442 Gene3D G3DSA:3.40.1030.10 70 322 3.9E-127 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL543_06565 0cac989dde70d07b16e60473993cfaaa 442 SMART SM00941 350 424 3.6E-25 T 11-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL543_06565 0cac989dde70d07b16e60473993cfaaa 442 SUPERFAMILY SSF47648 2 70 1.83E-21 T 11-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL543_06565 0cac989dde70d07b16e60473993cfaaa 442 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 113 128 - T 11-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL543_06565 0cac989dde70d07b16e60473993cfaaa 442 PIRSF PIRSF000478 1 437 1.6E-150 T 11-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL543_06565 0cac989dde70d07b16e60473993cfaaa 442 Pfam PF00591 Glycosyl transferase family, a/b domain 80 309 2.3E-48 T 11-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL543_15325 bfe5a53e8243736facc2db0f4e36e823 336 Hamap MF_00737 Formimidoylglutamase [hutG]. 6 324 44.412 T 11-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 AL543_15325 bfe5a53e8243736facc2db0f4e36e823 336 SUPERFAMILY SSF52768 10 330 9.89E-89 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily AL543_15325 bfe5a53e8243736facc2db0f4e36e823 336 Gene3D G3DSA:3.40.800.10 1 336 7.5E-147 T 11-10-2018 AL543_15325 bfe5a53e8243736facc2db0f4e36e823 336 ProSitePatterns PS01053 Arginase family signature. 252 273 - T 11-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 AL543_15325 bfe5a53e8243736facc2db0f4e36e823 336 Pfam PF00491 Arginase family 44 322 6.9E-63 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 AL543_15325 bfe5a53e8243736facc2db0f4e36e823 336 PIRSF PIRSF036979 25 330 8.6E-27 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 AL543_15325 bfe5a53e8243736facc2db0f4e36e823 336 TIGRFAM TIGR01227 hutG: formimidoylglutamase 11 324 1.7E-132 T 11-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 AL543_18615 35237666ddf943c32876c6eaa63f03bf 472 SUPERFAMILY SSF48452 75 267 2.18E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_01320 55158ff66b51d914d54dd92003a805a7 658 Pfam PF11826 Protein of unknown function (DUF3346) 290 514 1.5E-145 T 11-10-2018 IPR021781 Protein of unknown function DUF3346 AL543_15695 04d677a555182a1e593d2715cde1046d 523 SUPERFAMILY SSF141523 289 450 3.4E-18 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AL543_15695 04d677a555182a1e593d2715cde1046d 523 Pfam PF01471 Putative peptidoglycan binding domain 231 264 1.7E-6 T 11-10-2018 IPR002477 Peptidoglycan binding-like AL543_15695 04d677a555182a1e593d2715cde1046d 523 Pfam PF03734 L,D-transpeptidase catalytic domain 291 460 3.8E-29 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AL543_15695 04d677a555182a1e593d2715cde1046d 523 SUPERFAMILY SSF47090 195 271 1.49E-9 T 11-10-2018 IPR036365 PGBD-like superfamily AL543_15070 d826ae01cc374184abbf5534abe67ba9 311 Gene3D G3DSA:1.10.3210.10 26 305 1.1E-35 T 11-10-2018 AL543_15070 d826ae01cc374184abbf5534abe67ba9 311 Pfam PF08668 HDOD domain 44 237 1.8E-34 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD AL543_15070 d826ae01cc374184abbf5534abe67ba9 311 SUPERFAMILY SSF109604 37 305 2.07E-36 T 11-10-2018 AL543_18095 6fdb93127c223cd48ef9ec725e0511be 145 Pfam PF07811 TadE-like protein 12 54 1.4E-10 T 11-10-2018 IPR012495 TadE-like AL543_14290 81d0b8e25cba15a4a9d2bd32fb172b7a 253 SUPERFAMILY SSF53167 6 249 4.06E-72 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 AL543_14290 81d0b8e25cba15a4a9d2bd32fb172b7a 253 Pfam PF01048 Phosphorylase superfamily 20 251 5.3E-39 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AL543_14290 81d0b8e25cba15a4a9d2bd32fb172b7a 253 Gene3D G3DSA:3.40.50.1580 1 253 6.3E-82 T 11-10-2018 AL543_14290 81d0b8e25cba15a4a9d2bd32fb172b7a 253 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 65 80 - T 11-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL543_14290 81d0b8e25cba15a4a9d2bd32fb172b7a 253 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 5 251 6.8E-111 T 11-10-2018 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|MetaCyc: PWY-5532 AL543_20640 47ec0318080e2f8f18ef6620db855514 111 Pfam PF01638 HxlR-like helix-turn-helix 24 104 5.0E-18 T 11-10-2018 IPR002577 Helix-turn-helix, HxlR type AL543_20640 47ec0318080e2f8f18ef6620db855514 111 SUPERFAMILY SSF46785 20 107 4.09E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_20640 47ec0318080e2f8f18ef6620db855514 111 Gene3D G3DSA:1.10.10.10 12 111 3.9E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_12425 eb6e9519e6fca1b792334560359ce0ff 416 SMART SM00490 260 341 2.4E-32 T 11-10-2018 IPR001650 Helicase, C-terminal AL543_12425 eb6e9519e6fca1b792334560359ce0ff 416 Gene3D G3DSA:3.40.50.300 217 416 9.8E-51 T 11-10-2018 AL543_12425 eb6e9519e6fca1b792334560359ce0ff 416 Pfam PF00271 Helicase conserved C-terminal domain 234 341 6.3E-32 T 11-10-2018 IPR001650 Helicase, C-terminal AL543_12425 eb6e9519e6fca1b792334560359ce0ff 416 Pfam PF00270 DEAD/DEAH box helicase 27 195 3.8E-45 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL543_12425 eb6e9519e6fca1b792334560359ce0ff 416 Gene3D G3DSA:3.40.50.300 1 211 4.3E-71 T 11-10-2018 AL543_12425 eb6e9519e6fca1b792334560359ce0ff 416 SUPERFAMILY SSF52540 34 352 5.07E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_12425 eb6e9519e6fca1b792334560359ce0ff 416 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 3 416 51.069 T 11-10-2018 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 AL543_12425 eb6e9519e6fca1b792334560359ce0ff 416 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AL543_12425 eb6e9519e6fca1b792334560359ce0ff 416 SMART SM00487 22 222 2.0E-56 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL543_14155 1607acfc3ce16050494260edd49667bb 224 Hamap MF_00157 Ribonuclease T [rnt]. 1 224 117.873 T 11-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 AL543_14155 1607acfc3ce16050494260edd49667bb 224 Pfam PF00929 Exonuclease 20 195 2.1E-41 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL543_14155 1607acfc3ce16050494260edd49667bb 224 Gene3D G3DSA:3.30.420.10 9 216 3.9E-53 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AL543_14155 1607acfc3ce16050494260edd49667bb 224 SMART SM00479 18 204 4.2E-32 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL543_14155 1607acfc3ce16050494260edd49667bb 224 TIGRFAM TIGR01298 RNaseT: ribonuclease T 10 209 2.9E-98 T 11-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 AL543_14155 1607acfc3ce16050494260edd49667bb 224 SUPERFAMILY SSF53098 10 208 1.72E-55 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_01940 5a386ca032abd58b1fa1ff0025944a80 157 SUPERFAMILY SSF53155 4 79 2.94E-22 T 11-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AL543_01940 5a386ca032abd58b1fa1ff0025944a80 157 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 76 155 1.8E-33 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AL543_01940 5a386ca032abd58b1fa1ff0025944a80 157 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 6 155 45.437 T 11-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 AL543_01940 5a386ca032abd58b1fa1ff0025944a80 157 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 5 71 2.5E-8 T 11-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AL543_01940 5a386ca032abd58b1fa1ff0025944a80 157 Gene3D G3DSA:1.10.10.10 74 157 1.4E-37 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_01940 5a386ca032abd58b1fa1ff0025944a80 157 SUPERFAMILY SSF46767 74 155 1.7E-33 T 11-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 AL543_01940 5a386ca032abd58b1fa1ff0025944a80 157 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 75 154 3.5E-38 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AL543_01940 5a386ca032abd58b1fa1ff0025944a80 157 Gene3D G3DSA:3.30.160.70 1 70 2.5E-21 T 11-10-2018 AL543_01940 5a386ca032abd58b1fa1ff0025944a80 157 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 125 131 - T 11-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AL543_09065 e699bc12ce58e70180b0729b289e22ea 135 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 132 18.5 T 11-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 AL543_09065 e699bc12ce58e70180b0729b289e22ea 135 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 1.6E-26 T 11-10-2018 AL543_09065 e699bc12ce58e70180b0729b289e22ea 135 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 1.6E-26 T 11-10-2018 AL543_09065 e699bc12ce58e70180b0729b289e22ea 135 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 1.6E-26 T 11-10-2018 AL543_09065 e699bc12ce58e70180b0729b289e22ea 135 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 81 1.0E-34 T 11-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 AL543_09065 e699bc12ce58e70180b0729b289e22ea 135 Pfam PF02416 mttA/Hcf106 family 4 36 3.8E-6 T 11-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 AL543_00670 6adf3f2ed7072bc591fbdff0f4561994 308 Pfam PF00882 Zinc dependent phospholipase C 7 186 9.5E-26 T 11-10-2018 IPR029002 Phospholipase C/D Reactome: R-HSA-163125 AL543_13875 eaf7b59d385a849a7e9c37585fc95920 391 SMART SM00936 282 372 5.6E-37 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL543_13875 eaf7b59d385a849a7e9c37585fc95920 391 SUPERFAMILY SSF69189 282 374 4.71E-27 T 11-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL543_13875 eaf7b59d385a849a7e9c37585fc95920 391 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 282 372 7.5E-27 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL543_13875 eaf7b59d385a849a7e9c37585fc95920 391 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 33 262 7.0E-93 T 11-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AL543_13875 eaf7b59d385a849a7e9c37585fc95920 391 Gene3D G3DSA:3.40.710.10 32 282 5.4E-91 T 11-10-2018 AL543_13875 eaf7b59d385a849a7e9c37585fc95920 391 Gene3D G3DSA:2.60.410.10 283 372 2.6E-30 T 11-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL543_13875 eaf7b59d385a849a7e9c37585fc95920 391 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 65 76 1.8E-17 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AL543_13875 eaf7b59d385a849a7e9c37585fc95920 391 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 148 161 1.8E-17 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AL543_13875 eaf7b59d385a849a7e9c37585fc95920 391 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 121 138 1.8E-17 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AL543_13875 eaf7b59d385a849a7e9c37585fc95920 391 SUPERFAMILY SSF56601 12 282 7.39E-87 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AL543_00415 52b29f3c336ab38d4572662f3e812bb2 578 SUPERFAMILY SSF58104 269 577 2.88E-67 T 11-10-2018 AL543_00415 52b29f3c336ab38d4572662f3e812bb2 578 Gene3D G3DSA:1.10.287.950 247 578 2.0E-65 T 11-10-2018 AL543_00415 52b29f3c336ab38d4572662f3e812bb2 578 SMART SM00283 316 577 1.4E-58 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_00415 52b29f3c336ab38d4572662f3e812bb2 578 SMART SM00304 304 354 21.0 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_00415 52b29f3c336ab38d4572662f3e812bb2 578 SMART SM00304 248 301 5.7E-5 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_00415 52b29f3c336ab38d4572662f3e812bb2 578 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 364 544 2.6E-39 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_07275 4488042d619f94666417b342cc0649fe 200 SUPERFAMILY SSF52016 1 196 2.55E-61 T 11-10-2018 AL543_07275 4488042d619f94666417b342cc0649fe 200 Gene3D G3DSA:3.20.19.10 1 180 1.6E-77 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 AL543_07275 4488042d619f94666417b342cc0649fe 200 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 199 43.956 T 11-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 AL543_07275 4488042d619f94666417b342cc0649fe 200 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 188 3.1E-97 T 11-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 AL543_07275 4488042d619f94666417b342cc0649fe 200 Pfam PF00694 Aconitase C-terminal domain 1 125 3.8E-39 T 11-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 AL543_06465 9a39ac30834ac47e4e6da0407eac148a 313 Pfam PF01544 CorA-like Mg2+ transporter protein 29 305 1.0E-53 T 11-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 AL543_06465 9a39ac30834ac47e4e6da0407eac148a 313 SUPERFAMILY SSF143865 24 230 6.93E-30 T 11-10-2018 AL543_06465 9a39ac30834ac47e4e6da0407eac148a 313 Gene3D G3DSA:3.30.460.20 1 124 2.5E-40 T 11-10-2018 AL543_06465 9a39ac30834ac47e4e6da0407eac148a 313 Gene3D G3DSA:1.20.58.340 252 309 3.1E-8 T 11-10-2018 AL543_06465 9a39ac30834ac47e4e6da0407eac148a 313 Gene3D G3DSA:1.20.58.340 125 249 4.6E-30 T 11-10-2018 AL543_06465 9a39ac30834ac47e4e6da0407eac148a 313 SUPERFAMILY SSF144083 244 306 2.62E-13 T 11-10-2018 AL543_19395 aaafc9b76c41b4b2c44ccf1bfd4ba10e 341 Pfam PF02504 Fatty acid synthesis protein 5 327 6.7E-100 T 11-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 AL543_19395 aaafc9b76c41b4b2c44ccf1bfd4ba10e 341 SUPERFAMILY SSF53659 4 337 5.35E-102 T 11-10-2018 AL543_19395 aaafc9b76c41b4b2c44ccf1bfd4ba10e 341 PIRSF PIRSF002465 2 339 2.3E-124 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 AL543_19395 aaafc9b76c41b4b2c44ccf1bfd4ba10e 341 Gene3D G3DSA:3.40.718.10 2 340 2.3E-118 T 11-10-2018 AL543_19395 aaafc9b76c41b4b2c44ccf1bfd4ba10e 341 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 340 135.146 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 AL543_19395 aaafc9b76c41b4b2c44ccf1bfd4ba10e 341 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 335 1.2E-105 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 AL543_17085 090abd65a62255df1d3bcd7d64b0c243 377 SUPERFAMILY SSF111369 50 233 8.11E-16 T 11-10-2018 AL543_17085 090abd65a62255df1d3bcd7d64b0c243 377 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 35 367 8.9E-33 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL543_17085 090abd65a62255df1d3bcd7d64b0c243 377 Gene3D G3DSA:1.10.287.470 91 177 5.8E-51 T 11-10-2018 AL543_17085 090abd65a62255df1d3bcd7d64b0c243 377 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 45 257 2.2E-16 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL543_17085 090abd65a62255df1d3bcd7d64b0c243 377 Gene3D G3DSA:2.40.420.20 41 367 5.8E-51 T 11-10-2018 AL543_17085 090abd65a62255df1d3bcd7d64b0c243 377 Gene3D G3DSA:2.40.50.100 57 217 5.8E-51 T 11-10-2018 AL543_17085 090abd65a62255df1d3bcd7d64b0c243 377 Gene3D G3DSA:2.40.30.170 46 307 5.8E-51 T 11-10-2018 AL543_16385 a59558163f809bc832a86d3722be434a 468 Gene3D G3DSA:3.40.605.10 22 458 5.7E-156 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AL543_16385 a59558163f809bc832a86d3722be434a 468 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 241 248 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AL543_16385 a59558163f809bc832a86d3722be434a 468 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 269 280 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AL543_16385 a59558163f809bc832a86d3722be434a 468 Pfam PF00171 Aldehyde dehydrogenase family 21 458 5.4E-142 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AL543_16385 a59558163f809bc832a86d3722be434a 468 Gene3D G3DSA:3.40.309.10 248 436 5.7E-156 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AL543_16385 a59558163f809bc832a86d3722be434a 468 SUPERFAMILY SSF53720 4 466 3.27E-143 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AL543_04835 5bc857cf6feadb212aeb8f06584d0f8b 78 SUPERFAMILY SSF54928 2 77 9.0E-24 T 11-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 AL543_04835 5bc857cf6feadb212aeb8f06584d0f8b 78 SMART SM00360 2 75 1.0E-21 T 11-10-2018 IPR000504 RNA recognition motif domain GO:0003676 AL543_04835 5bc857cf6feadb212aeb8f06584d0f8b 78 Gene3D G3DSA:3.30.70.330 1 78 2.1E-23 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily AL543_04835 5bc857cf6feadb212aeb8f06584d0f8b 78 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 72 3.1E-19 T 11-10-2018 IPR000504 RNA recognition motif domain GO:0003676 AL543_02485 14cd52191acec64e23b7a3dc3e51ab94 446 Pfam PF03553 Na+/H+ antiporter family 31 220 1.8E-13 T 11-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 AL543_12275 d18ecb812ed53605e732291e9ab8af95 347 Pfam PF13609 Gram-negative porin 18 322 2.0E-27 T 11-10-2018 AL543_12275 d18ecb812ed53605e732291e9ab8af95 347 Gene3D G3DSA:2.40.160.10 42 347 8.3E-63 T 11-10-2018 IPR023614 Porin domain superfamily AL543_12275 d18ecb812ed53605e732291e9ab8af95 347 SUPERFAMILY SSF56935 43 347 1.43E-52 T 11-10-2018 AL543_18820 e7629d5bffc09feaf2dcbbe2224c5ea4 213 Pfam PF02397 Bacterial sugar transferase 15 208 1.2E-62 T 11-10-2018 IPR003362 Bacterial sugar transferase AL543_18390 ff3417cc9fe0df9c2341e1b91a1e1429 340 SUPERFAMILY SSF56935 20 340 5.5E-31 T 11-10-2018 AL543_18390 ff3417cc9fe0df9c2341e1b91a1e1429 340 Gene3D G3DSA:2.40.160.10 20 340 3.2E-29 T 11-10-2018 IPR023614 Porin domain superfamily AL543_18390 ff3417cc9fe0df9c2341e1b91a1e1429 340 Pfam PF13609 Gram-negative porin 7 322 1.7E-27 T 11-10-2018 AL543_14555 8403a5cef0063a14b125fc9a3572c831 125 Pfam PF06339 Ectoine synthase 11 117 2.5E-37 T 11-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 AL543_14555 8403a5cef0063a14b125fc9a3572c831 125 ProDom PD080544 SYNTHASE 4.2.1.- LYASE L-ECTOINE DEHYDRATASE N-ACETYLDIAMINOBUTYRATE ECTOINE ENZYME SYNTHASE:ECTOINE ECTC 1 125 1.0E-34 T 11-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 AL543_14555 8403a5cef0063a14b125fc9a3572c831 125 Gene3D G3DSA:2.60.120.10 1 113 3.9E-35 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL543_14555 8403a5cef0063a14b125fc9a3572c831 125 SUPERFAMILY SSF51182 14 112 1.8E-14 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AL543_12600 7f131d3a5bebb229d8ecf76245f3f6d6 357 PIRSF PIRSF001361 1 353 3.0E-163 T 11-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AL543_12600 7f131d3a5bebb229d8ecf76245f3f6d6 357 SUPERFAMILY SSF51569 8 345 1.74E-137 T 11-10-2018 AL543_12600 7f131d3a5bebb229d8ecf76245f3f6d6 357 Pfam PF00793 DAHP synthetase I family 41 340 1.8E-104 T 11-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AL543_12600 7f131d3a5bebb229d8ecf76245f3f6d6 357 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 8 347 1.8E-161 T 11-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AL543_12600 7f131d3a5bebb229d8ecf76245f3f6d6 357 Gene3D G3DSA:3.20.20.70 3 348 5.0E-156 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_10075 70dd79066e40f68748649ea6b79075ed 304 SUPERFAMILY SSF103481 46 146 3.27E-13 T 11-10-2018 AL543_10075 70dd79066e40f68748649ea6b79075ed 304 Pfam PF00892 EamA-like transporter family 12 146 2.2E-15 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL543_10075 70dd79066e40f68748649ea6b79075ed 304 TIGRFAM TIGR00688 rarD: protein RarD 12 265 2.9E-82 T 11-10-2018 IPR004626 RarD protein GO:0005887 AL543_10075 70dd79066e40f68748649ea6b79075ed 304 SUPERFAMILY SSF103481 190 291 4.32E-8 T 11-10-2018 AL543_05655 9ecb9e38c8a315fcd2427f4d41f872d5 376 SUPERFAMILY SSF103025 8 284 7.06E-89 T 11-10-2018 AL543_05655 9ecb9e38c8a315fcd2427f4d41f872d5 376 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 9 369 6.7E-109 T 11-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 AL543_05655 9ecb9e38c8a315fcd2427f4d41f872d5 376 Gene3D G3DSA:4.10.1250.10 236 284 1.1E-19 T 11-10-2018 AL543_05655 9ecb9e38c8a315fcd2427f4d41f872d5 376 Gene3D G3DSA:3.30.1360.120 10 234 4.2E-82 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 AL543_05655 9ecb9e38c8a315fcd2427f4d41f872d5 376 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 271 365 5.6E-23 T 11-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AL543_05655 9ecb9e38c8a315fcd2427f4d41f872d5 376 Pfam PF01571 Aminomethyltransferase folate-binding domain 13 258 8.4E-85 T 11-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain AL543_05655 9ecb9e38c8a315fcd2427f4d41f872d5 376 Gene3D G3DSA:3.30.70.1400 59 142 4.2E-82 T 11-10-2018 AL543_05655 9ecb9e38c8a315fcd2427f4d41f872d5 376 PIRSF PIRSF006487 1 375 1.2E-80 T 11-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 AL543_05655 9ecb9e38c8a315fcd2427f4d41f872d5 376 SUPERFAMILY SSF101790 282 374 3.76E-26 T 11-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal AL543_05655 9ecb9e38c8a315fcd2427f4d41f872d5 376 Gene3D G3DSA:2.40.30.110 287 364 1.3E-28 T 11-10-2018 AL543_00240 5d172a03c0de4d7cbb672f9ea2be5a87 1048 Pfam PF00271 Helicase conserved C-terminal domain 821 867 8.8E-6 T 11-10-2018 IPR001650 Helicase, C-terminal AL543_00240 5d172a03c0de4d7cbb672f9ea2be5a87 1048 Gene3D G3DSA:3.40.50.300 798 901 1.5E-8 T 11-10-2018 AL543_00240 5d172a03c0de4d7cbb672f9ea2be5a87 1048 SUPERFAMILY SSF52540 413 881 4.81E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_16305 50a9230be6bda2e2b390b07f01825f87 468 Gene3D G3DSA:3.20.20.140 86 375 2.2E-145 T 11-10-2018 AL543_16305 50a9230be6bda2e2b390b07f01825f87 468 Pfam PF01979 Amidohydrolase family 82 431 1.6E-68 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AL543_16305 50a9230be6bda2e2b390b07f01825f87 468 Gene3D G3DSA:2.30.40.10 36 449 2.2E-145 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AL543_16305 50a9230be6bda2e2b390b07f01825f87 468 SUPERFAMILY SSF51338 28 454 2.1E-34 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AL543_16305 50a9230be6bda2e2b390b07f01825f87 468 SUPERFAMILY SSF51556 85 383 5.21E-82 T 11-10-2018 IPR032466 Metal-dependent hydrolase AL543_02635 4c5e4e6ffc84c9940d0f0627d0756981 153 Pfam PF05926 Phage head completion protein (GPL) 14 153 6.1E-42 T 11-10-2018 IPR009225 Bacteriophage head completion protein GpL GO:0019069 AL543_13940 a812a5c4548270a258cc9531bedd116c 367 Gene3D G3DSA:3.40.50.300 117 323 7.9E-74 T 11-10-2018 AL543_13940 a812a5c4548270a258cc9531bedd116c 367 SUPERFAMILY SSF52540 119 320 4.45E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_13940 a812a5c4548270a258cc9531bedd116c 367 Pfam PF02562 PhoH-like protein 120 323 9.0E-95 T 11-10-2018 IPR003714 PhoH-like protein GO:0005524 AL543_14015 8b5159e9f596ad6f1cabc55dcaef2a19 149 Pfam PF01957 NfeD-like C-terminal, partner-binding 12 148 4.4E-26 T 11-10-2018 IPR002810 NfeD-like, C-terminal domain AL543_14015 8b5159e9f596ad6f1cabc55dcaef2a19 149 SUPERFAMILY SSF141322 91 148 4.97E-7 T 11-10-2018 AL543_14015 8b5159e9f596ad6f1cabc55dcaef2a19 149 Gene3D G3DSA:2.40.50.140 80 149 2.4E-12 T 11-10-2018 AL543_19690 1f9560cf35186ed87c17326f4a975424 145 Pfam PF01230 HIT domain 11 101 7.7E-19 T 11-10-2018 IPR001310 Histidine triad (HIT) protein AL543_19690 1f9560cf35186ed87c17326f4a975424 145 PIRSF PIRSF000714 3 143 1.2E-50 T 11-10-2018 IPR026026 Histidine triad hydrolase, Hint-type AL543_19690 1f9560cf35186ed87c17326f4a975424 145 Gene3D G3DSA:3.30.428.10 2 141 1.1E-41 T 11-10-2018 IPR036265 HIT-like superfamily AL543_19690 1f9560cf35186ed87c17326f4a975424 145 SUPERFAMILY SSF54197 4 135 2.55E-33 T 11-10-2018 IPR036265 HIT-like superfamily AL543_05460 b7eeb567ccdc3aef093f974d68f8d15f 95 Gene3D G3DSA:3.30.2310.20 1 93 5.8E-17 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily AL543_05460 b7eeb567ccdc3aef093f974d68f8d15f 95 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 3 88 2.0E-15 T 11-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AL543_16365 ae1a82201efde860f0c40dce57cf3dba 161 PRINTS PR01438 Universal stress protein signature 5 23 1.8E-10 T 11-10-2018 IPR006015 Universal stress protein A AL543_16365 ae1a82201efde860f0c40dce57cf3dba 161 PRINTS PR01438 Universal stress protein signature 117 129 1.8E-10 T 11-10-2018 IPR006015 Universal stress protein A AL543_16365 ae1a82201efde860f0c40dce57cf3dba 161 PRINTS PR01438 Universal stress protein signature 135 157 1.8E-10 T 11-10-2018 IPR006015 Universal stress protein A AL543_16365 ae1a82201efde860f0c40dce57cf3dba 161 SUPERFAMILY SSF52402 5 157 2.09E-29 T 11-10-2018 AL543_16365 ae1a82201efde860f0c40dce57cf3dba 161 Gene3D G3DSA:3.40.50.620 1 161 7.9E-34 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL543_16365 ae1a82201efde860f0c40dce57cf3dba 161 Pfam PF00582 Universal stress protein family 6 157 1.3E-24 T 11-10-2018 IPR006016 UspA AL543_18640 af0601be995d71aef25592dfc48c0d2a 530 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 515 2.3E-295 T 11-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 AL543_18640 af0601be995d71aef25592dfc48c0d2a 530 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 516 1.1E-300 T 11-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 AL543_18640 af0601be995d71aef25592dfc48c0d2a 530 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 530 375.116 T 11-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 AL543_19465 1c3ec19e997f79bde1acb7e830460279 479 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 7 457 1.9E-162 T 11-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 AL543_19465 1c3ec19e997f79bde1acb7e830460279 479 Pfam PF03553 Na+/H+ antiporter family 161 453 3.3E-67 T 11-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 AL543_07870 a8e5ac83c4349df2159599eb875e2be7 211 Gene3D G3DSA:1.25.40.10 22 211 5.2E-25 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_07870 a8e5ac83c4349df2159599eb875e2be7 211 SUPERFAMILY SSF81901 65 177 6.02E-21 T 11-10-2018 AL543_07870 a8e5ac83c4349df2159599eb875e2be7 211 SMART SM00671 72 107 0.015 T 11-10-2018 IPR006597 Sel1-like repeat AL543_07870 a8e5ac83c4349df2159599eb875e2be7 211 SMART SM00671 108 143 2.9E-6 T 11-10-2018 IPR006597 Sel1-like repeat AL543_07870 a8e5ac83c4349df2159599eb875e2be7 211 SMART SM00671 144 179 18.0 T 11-10-2018 IPR006597 Sel1-like repeat AL543_07870 a8e5ac83c4349df2159599eb875e2be7 211 Pfam PF08238 Sel1 repeat 76 106 0.025 T 11-10-2018 IPR006597 Sel1-like repeat AL543_07870 a8e5ac83c4349df2159599eb875e2be7 211 Pfam PF08238 Sel1 repeat 108 143 1.7E-5 T 11-10-2018 IPR006597 Sel1-like repeat AL543_07870 a8e5ac83c4349df2159599eb875e2be7 211 Pfam PF08238 Sel1 repeat 149 171 190.0 T 11-10-2018 IPR006597 Sel1-like repeat AL543_15010 8e6f1cfed8a2f149234700d632bb47a0 741 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 1 740 0.0 T 11-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AL543_15010 8e6f1cfed8a2f149234700d632bb47a0 741 SUPERFAMILY SSF53659 5 740 0.0 T 11-10-2018 AL543_15010 8e6f1cfed8a2f149234700d632bb47a0 741 Gene3D G3DSA:3.40.718.10 415 650 3.2E-9 T 11-10-2018 AL543_15010 8e6f1cfed8a2f149234700d632bb47a0 741 Pfam PF03971 Monomeric isocitrate dehydrogenase 7 740 0.0 T 11-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AL543_15010 8e6f1cfed8a2f149234700d632bb47a0 741 PIRSF PIRSF009407 1 741 0.0 T 11-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AL543_09230 fa87f2d07e0c85b3dbdb3163b27f7448 401 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 10 361 6.6E-69 T 11-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 AL543_09230 fa87f2d07e0c85b3dbdb3163b27f7448 401 Gene3D G3DSA:1.20.1720.10 14 389 6.1E-90 T 11-10-2018 AL543_09230 fa87f2d07e0c85b3dbdb3163b27f7448 401 Pfam PF07690 Major Facilitator Superfamily 18 356 3.8E-46 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL543_09230 fa87f2d07e0c85b3dbdb3163b27f7448 401 ProSitePatterns PS00216 Sugar transport proteins signature 1. 67 83 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AL543_09230 fa87f2d07e0c85b3dbdb3163b27f7448 401 SUPERFAMILY SSF103473 11 387 1.07E-58 T 11-10-2018 IPR036259 MFS transporter superfamily AL543_00830 a1939522d9e690757d8a045d92805aa4 149 SUPERFAMILY SSF55874 42 141 1.44E-13 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_00830 a1939522d9e690757d8a045d92805aa4 149 Pfam PF13581 Histidine kinase-like ATPase domain 29 143 1.5E-11 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL543_00830 a1939522d9e690757d8a045d92805aa4 149 Gene3D G3DSA:3.30.565.10 20 147 2.9E-14 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL543_18625 16897a14ea702ff9a37fbaf56f5df0f1 672 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 431 460 2.0E-22 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL543_18625 16897a14ea702ff9a37fbaf56f5df0f1 672 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 508 535 2.0E-22 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL543_18625 16897a14ea702ff9a37fbaf56f5df0f1 672 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 537 566 2.0E-22 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL543_18625 16897a14ea702ff9a37fbaf56f5df0f1 672 SMART SM00283 410 671 9.2E-71 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_18625 16897a14ea702ff9a37fbaf56f5df0f1 672 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 481 638 1.1E-43 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL543_18625 16897a14ea702ff9a37fbaf56f5df0f1 672 SUPERFAMILY SSF58104 363 672 2.62E-72 T 11-10-2018 AL543_18625 16897a14ea702ff9a37fbaf56f5df0f1 672 SMART SM00304 343 395 3.1E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL543_18625 16897a14ea702ff9a37fbaf56f5df0f1 672 Gene3D G3DSA:1.10.287.950 343 672 1.8E-71 T 11-10-2018 AL543_05035 f003e230b1e8dd814777231c2e6c78b3 130 Pfam PF12680 SnoaL-like domain 9 102 1.1E-9 T 11-10-2018 IPR037401 SnoaL-like domain AL543_05035 f003e230b1e8dd814777231c2e6c78b3 130 SUPERFAMILY SSF54427 1 123 7.71E-30 T 11-10-2018 IPR032710 NTF2-like domain superfamily AL543_05035 f003e230b1e8dd814777231c2e6c78b3 130 Gene3D G3DSA:3.10.450.50 1 127 1.8E-32 T 11-10-2018 AL543_08920 cdcebe0e5c7437232a6daffdf0199d4b 843 Pfam PF01295 Adenylate cyclase, class-I 226 829 8.6E-254 T 11-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 AL543_08920 cdcebe0e5c7437232a6daffdf0199d4b 843 PIRSF PIRSF001444 1 843 0.0 T 11-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 AL543_08920 cdcebe0e5c7437232a6daffdf0199d4b 843 Pfam PF12633 Adenylate cyclase NT domain 5 198 3.4E-76 T 11-10-2018 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 AL543_16455 f3f6864b02745b394e88598991da0210 285 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 7 281 8.8E-63 T 11-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 AL543_16455 f3f6864b02745b394e88598991da0210 285 TIGRFAM TIGR02298 HpaD_Fe: 3,4-dihydroxyphenylacetate 2,3-dioxygenase 1 283 2.2E-170 T 11-10-2018 IPR011984 3,4-dihydroxyphenylacetate 2,3-dioxygenase GO:0008687 KEGG: 00350+1.13.11.15 AL543_16455 f3f6864b02745b394e88598991da0210 285 SUPERFAMILY SSF53213 12 281 3.79E-51 T 11-10-2018 AL543_16455 f3f6864b02745b394e88598991da0210 285 Gene3D G3DSA:3.40.830.10 1 285 3.2E-82 T 11-10-2018 AL543_09510 cd2f2c91db7b05203b858ba4620c5501 210 Gene3D G3DSA:3.40.50.150 5 209 6.5E-67 T 11-10-2018 AL543_09510 cd2f2c91db7b05203b858ba4620c5501 210 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 29 207 1.3E-57 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AL543_09510 cd2f2c91db7b05203b858ba4620c5501 210 Pfam PF02527 rRNA small subunit methyltransferase G 23 204 9.3E-63 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AL543_09510 cd2f2c91db7b05203b858ba4620c5501 210 PIRSF PIRSF003078 1 209 1.2E-59 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AL543_09510 cd2f2c91db7b05203b858ba4620c5501 210 SUPERFAMILY SSF53335 11 208 2.15E-39 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL543_09510 cd2f2c91db7b05203b858ba4620c5501 210 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 16 205 28.123 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AL543_15745 140f11d839dbb6fb027bec84bb024822 158 SMART SM00347 24 124 2.1E-24 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL543_15745 140f11d839dbb6fb027bec84bb024822 158 SUPERFAMILY SSF46785 5 141 7.81E-33 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_15745 140f11d839dbb6fb027bec84bb024822 158 Gene3D G3DSA:1.10.10.10 1 137 7.4E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_15745 140f11d839dbb6fb027bec84bb024822 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 1.3E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL543_15745 140f11d839dbb6fb027bec84bb024822 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 1.3E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL543_15745 140f11d839dbb6fb027bec84bb024822 158 Pfam PF01047 MarR family 31 89 5.5E-16 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL543_07670 aa3d9509f6f3df4e012c68abac2aeddf 288 Gene3D G3DSA:3.30.950.10 150 287 6.6E-47 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 AL543_07670 aa3d9509f6f3df4e012c68abac2aeddf 288 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 114 147 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AL543_07670 aa3d9509f6f3df4e012c68abac2aeddf 288 Gene3D G3DSA:3.40.1010.10 32 149 8.1E-44 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 AL543_07670 aa3d9509f6f3df4e012c68abac2aeddf 288 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 36 245 6.1E-47 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 AL543_07670 aa3d9509f6f3df4e012c68abac2aeddf 288 SUPERFAMILY SSF53790 30 277 9.29E-80 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 AL543_07670 aa3d9509f6f3df4e012c68abac2aeddf 288 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 39 53 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AL543_07670 aa3d9509f6f3df4e012c68abac2aeddf 288 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 34 267 9.3E-93 T 11-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AL543_11245 a6c799d403c2f836af6543e885129dd7 1292 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 7 1280 0.0 T 11-10-2018 IPR011836 Conserved hypothetical protein CHP02099 AL543_11245 a6c799d403c2f836af6543e885129dd7 1292 Pfam PF13116 Protein of unknown function 505 791 4.9E-91 T 11-10-2018 IPR025263 Domain of unknown function DUF3971 AL543_11245 a6c799d403c2f836af6543e885129dd7 1292 Pfam PF13502 AsmA-like C-terminal region 1030 1270 1.8E-58 T 11-10-2018 IPR032712 AsmA-like, C-terminal AL543_02420 abb84ab3f0bdb32eac93246535e721e1 402 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 192 399 1.8E-71 T 11-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 AL543_02420 abb84ab3f0bdb32eac93246535e721e1 402 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 9.4E-24 T 11-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 AL543_02420 abb84ab3f0bdb32eac93246535e721e1 402 Pfam PF07670 Nucleoside recognition 90 185 4.2E-7 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AL543_02420 abb84ab3f0bdb32eac93246535e721e1 402 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 399 2.5E-138 T 11-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 AL543_06470 af7744143e5165734ed59c3e220797ef 195 SUPERFAMILY SSF110857 11 135 2.09E-18 T 11-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily AL543_06470 af7744143e5165734ed59c3e220797ef 195 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 15 120 1.4E-7 T 11-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like AL543_06470 af7744143e5165734ed59c3e220797ef 195 Gene3D G3DSA:3.10.490.10 13 133 1.2E-6 T 11-10-2018 AL543_17175 c660e30dc9e26efd679d3898c6b7f5b3 123 PIRSF PIRSF021239 8 121 2.2E-57 T 11-10-2018 IPR007437 Protein of unknown function DUF486 AL543_17175 c660e30dc9e26efd679d3898c6b7f5b3 123 Pfam PF04342 Putative member of DMT superfamily (DUF486) 15 118 5.6E-47 T 11-10-2018 IPR007437 Protein of unknown function DUF486 AL543_07255 2a65fd4fcb3c210422c4d06c9b378251 210 SUPERFAMILY SSF46689 7 83 1.69E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_07255 2a65fd4fcb3c210422c4d06c9b378251 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 65 2.4E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL543_07255 2a65fd4fcb3c210422c4d06c9b378251 210 Gene3D G3DSA:1.10.357.10 2 210 2.2E-58 T 11-10-2018 AL543_07255 2a65fd4fcb3c210422c4d06c9b378251 210 SUPERFAMILY SSF48498 87 205 6.12E-7 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AL543_07255 2a65fd4fcb3c210422c4d06c9b378251 210 Pfam PF14514 Transcriptional regulator, TetR, C-terminal 89 207 9.4E-6 T 11-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL543_07470 df95058d14421f8ac32b6f9fbfb1b502 258 Pfam PF02405 Permease MlaE 42 254 9.2E-75 T 11-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 AL543_07470 df95058d14421f8ac32b6f9fbfb1b502 258 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 5 256 7.5E-98 T 11-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria AL543_02100 3a1f7c9e756b84a5a0704e73a546a684 496 SUPERFAMILY SSF49879 26 111 8.36E-8 T 11-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 AL543_02100 3a1f7c9e756b84a5a0704e73a546a684 496 Gene3D G3DSA:2.60.200.20 5 119 1.8E-6 T 11-10-2018 AL543_02100 3a1f7c9e756b84a5a0704e73a546a684 496 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 9 490 1.4E-77 T 11-10-2018 IPR017735 Type VI secretion system, FHA domain-containing protein AL543_18450 b8b369182dbef1432353f576502ada26 513 Pfam PF11840 Protein of unknown function (DUF3360) 9 513 3.9E-270 T 11-10-2018 IPR021794 Protein of unknown function DUF3360 AL543_14785 bf649031ff074aa0894e89242b602ba5 336 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_14785 bf649031ff074aa0894e89242b602ba5 336 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 247 314 1.6E-19 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL543_14785 bf649031ff074aa0894e89242b602ba5 336 SUPERFAMILY SSF52540 15 267 2.6E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_14785 bf649031ff074aa0894e89242b602ba5 336 Pfam PF00005 ABC transporter 44 195 1.4E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_14785 bf649031ff074aa0894e89242b602ba5 336 Gene3D G3DSA:3.40.50.300 12 336 1.2E-96 T 11-10-2018 AL543_14785 bf649031ff074aa0894e89242b602ba5 336 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 246 332 9.3E-27 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL543_14785 bf649031ff074aa0894e89242b602ba5 336 SMART SM00382 52 245 1.2E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_11580 be45775070b3e166ddc8193b16ea7492 318 SUPERFAMILY SSF52440 2 122 4.03E-47 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AL543_11580 be45775070b3e166ddc8193b16ea7492 318 Gene3D G3DSA:3.30.1490.20 137 196 7.7E-30 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AL543_11580 be45775070b3e166ddc8193b16ea7492 318 Hamap MF_00162 Glutathione synthetase [gshB]. 1 316 178.844 T 11-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AL543_11580 be45775070b3e166ddc8193b16ea7492 318 Gene3D G3DSA:3.30.470.20 197 300 1.1E-39 T 11-10-2018 AL543_11580 be45775070b3e166ddc8193b16ea7492 318 Gene3D G3DSA:3.40.50.20 1 129 2.7E-52 T 11-10-2018 AL543_11580 be45775070b3e166ddc8193b16ea7492 318 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 311 2.1E-140 T 11-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AL543_11580 be45775070b3e166ddc8193b16ea7492 318 SUPERFAMILY SSF56059 123 313 9.56E-60 T 11-10-2018 AL543_11580 be45775070b3e166ddc8193b16ea7492 318 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 5.6E-49 T 11-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AL543_11580 be45775070b3e166ddc8193b16ea7492 318 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 2.0E-79 T 11-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AL543_16995 097cf10bd936c092aabb197bf24cf7ef 134 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 132 5.7E-29 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 AL543_16995 097cf10bd936c092aabb197bf24cf7ef 134 Gene3D G3DSA:3.30.420.270 61 129 5.6E-12 T 11-10-2018 AL543_04550 91b5374f36855354d340ea65cbe3f192 288 SUPERFAMILY SSF141868 53 283 1.09E-41 T 11-10-2018 IPR035919 EAL domain superfamily AL543_04550 91b5374f36855354d340ea65cbe3f192 288 SMART SM00052 24 280 3.1E-10 T 11-10-2018 IPR001633 EAL domain AL543_04550 91b5374f36855354d340ea65cbe3f192 288 Gene3D G3DSA:3.20.20.450 47 288 4.8E-40 T 11-10-2018 IPR035919 EAL domain superfamily AL543_04550 91b5374f36855354d340ea65cbe3f192 288 Pfam PF00563 EAL domain 52 275 2.6E-38 T 11-10-2018 IPR001633 EAL domain AL543_15285 a10214ced2e54fc1892bed48210d3cba 229 Pfam PF10979 Protein of unknown function (DUF2786) 7 44 1.3E-11 T 11-10-2018 IPR024498 Domain of unknown function DUF2786 AL543_15285 a10214ced2e54fc1892bed48210d3cba 229 PIRSF PIRSF028111 2 229 5.5E-83 T 11-10-2018 IPR016868 Bacteriophage B3, Orf5 AL543_16685 00345cfc8627084898c6e84e9e9f18b6 149 Pfam PF17414 MatP C-terminal ribbon-helix-helix domain 88 147 3.9E-26 T 11-10-2018 IPR035375 MatP, C-terminal ribbon-helix-helix domain AL543_16685 00345cfc8627084898c6e84e9e9f18b6 149 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 131 3.0E-67 T 11-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 AL543_16685 00345cfc8627084898c6e84e9e9f18b6 149 Gene3D G3DSA:1.20.1270.380 1 89 1.0E-47 T 11-10-2018 IPR038339 MatP, N-terminal domain superfamily AL543_16685 00345cfc8627084898c6e84e9e9f18b6 149 Gene3D G3DSA:1.10.1220.10 98 149 2.7E-20 T 11-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AL543_16685 00345cfc8627084898c6e84e9e9f18b6 149 Pfam PF06303 MatP N-terminal domain 2 85 5.7E-42 T 11-10-2018 IPR035087 MatP, N-terminal AL543_16685 00345cfc8627084898c6e84e9e9f18b6 149 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 28.637 T 11-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 AL543_17330 2e7c2ecdd02235b91aeb1b7772260b21 364 Pfam PF05971 Protein of unknown function (DUF890) 46 353 1.1E-145 T 11-10-2018 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 AL543_17330 2e7c2ecdd02235b91aeb1b7772260b21 364 Gene3D G3DSA:3.40.50.150 81 353 7.7E-74 T 11-10-2018 AL543_17330 2e7c2ecdd02235b91aeb1b7772260b21 364 PIRSF PIRSF029038 37 364 2.6E-153 T 11-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 AL543_17330 2e7c2ecdd02235b91aeb1b7772260b21 364 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 48 355 54.325 T 11-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 AL543_17330 2e7c2ecdd02235b91aeb1b7772260b21 364 SUPERFAMILY SSF53335 87 353 2.04E-29 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL543_06920 67036702e7f3923cd7f42831a754e440 408 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 168 196 - T 11-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 AL543_06920 67036702e7f3923cd7f42831a754e440 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 372 386 5.6E-20 T 11-10-2018 IPR003004 GspF/PilC family AL543_06920 67036702e7f3923cd7f42831a754e440 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 168 196 5.6E-20 T 11-10-2018 IPR003004 GspF/PilC family AL543_06920 67036702e7f3923cd7f42831a754e440 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 388 407 5.6E-20 T 11-10-2018 IPR003004 GspF/PilC family AL543_06920 67036702e7f3923cd7f42831a754e440 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 69 81 5.6E-20 T 11-10-2018 IPR003004 GspF/PilC family AL543_06920 67036702e7f3923cd7f42831a754e440 408 Gene3D G3DSA:1.20.81.30 260 371 6.8E-27 T 11-10-2018 AL543_06920 67036702e7f3923cd7f42831a754e440 408 Gene3D G3DSA:1.20.81.30 59 175 3.5E-29 T 11-10-2018 AL543_06920 67036702e7f3923cd7f42831a754e440 408 Pfam PF00482 Type II secretion system (T2SS), protein F 277 399 8.2E-28 T 11-10-2018 IPR018076 Type II secretion system F domain AL543_06920 67036702e7f3923cd7f42831a754e440 408 Pfam PF00482 Type II secretion system (T2SS), protein F 74 196 2.3E-31 T 11-10-2018 IPR018076 Type II secretion system F domain AL543_07045 0c2fcb6f12de724448c2f49b48d4177e 289 Gene3D G3DSA:3.40.1190.20 103 282 7.6E-14 T 11-10-2018 IPR029056 Ribokinase-like AL543_07045 0c2fcb6f12de724448c2f49b48d4177e 289 Gene3D G3DSA:3.40.1190.20 1 98 1.7E-5 T 11-10-2018 IPR029056 Ribokinase-like AL543_07045 0c2fcb6f12de724448c2f49b48d4177e 289 SUPERFAMILY SSF53613 1 273 3.93E-15 T 11-10-2018 IPR029056 Ribokinase-like AL543_07045 0c2fcb6f12de724448c2f49b48d4177e 289 Pfam PF08543 Phosphomethylpyrimidine kinase 129 234 1.4E-4 T 11-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 AL543_09275 c43a3c2e8be6296ef35c4a89c354e65b 126 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 8 119 7.9E-24 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AL543_09275 c43a3c2e8be6296ef35c4a89c354e65b 126 TIGRFAM TIGR00494 crcB: protein CrcB 9 120 5.8E-28 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AL543_09275 c43a3c2e8be6296ef35c4a89c354e65b 126 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 6 124 19.013 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AL543_19175 f30f0e6b11b80ff0e4079da9d5d30c1d 183 TIGRFAM TIGR03902 rhom_GG_sort: rhombosortase 24 171 9.9E-50 T 11-10-2018 IPR023826 Rhomboid-like serine protease, proteobacteria AL543_19175 f30f0e6b11b80ff0e4079da9d5d30c1d 183 Pfam PF01694 Rhomboid family 33 172 1.5E-12 T 11-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AL543_19175 f30f0e6b11b80ff0e4079da9d5d30c1d 183 SUPERFAMILY SSF144091 3 172 7.46E-27 T 11-10-2018 AL543_19175 f30f0e6b11b80ff0e4079da9d5d30c1d 183 Gene3D G3DSA:1.20.1540.10 1 180 4.5E-17 T 11-10-2018 IPR035952 Rhomboid-like superfamily AL543_15940 f015d8b909adc63b3db3842a376b4fc0 306 Pfam PF04393 Protein of unknown function (DUF535) 25 295 2.9E-78 T 11-10-2018 IPR007488 Protein of unknown function DUF535 AL543_08795 eaf323f723cc1ba95ccd3a590860fc18 327 PIRSF PIRSF003097 28 323 4.3E-63 T 11-10-2018 IPR004513 Cell division protein FtsX GO:0016021 AL543_08795 eaf323f723cc1ba95ccd3a590860fc18 327 Gene3D G3DSA:3.30.70.3040 87 184 1.1E-5 T 11-10-2018 AL543_17045 1c7f03183fe8d390067d64f1c918171d 237 Gene3D G3DSA:3.20.20.190 2 237 5.9E-69 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 AL543_17045 1c7f03183fe8d390067d64f1c918171d 237 SUPERFAMILY SSF51695 5 236 7.12E-68 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 AL543_17045 1c7f03183fe8d390067d64f1c918171d 237 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 9 233 1.5E-37 T 11-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 AL543_18795 217e4872a6c2276ed8489c0a620a9133 242 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 185 216 2.3E-6 T 11-10-2018 IPR001451 Hexapeptide repeat AL543_18795 217e4872a6c2276ed8489c0a620a9133 242 SUPERFAMILY SSF51161 96 235 3.85E-29 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AL543_18795 217e4872a6c2276ed8489c0a620a9133 242 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 190 218 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AL543_18795 217e4872a6c2276ed8489c0a620a9133 242 Gene3D G3DSA:2.160.10.10 76 236 6.6E-34 T 11-10-2018 AL543_04285 11c395ccd3f96709bbf6407ac6dc30d9 550 SMART SM00382 357 537 3.0E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_04285 11c395ccd3f96709bbf6407ac6dc30d9 550 Pfam PF00664 ABC transporter transmembrane region 58 289 1.6E-19 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AL543_04285 11c395ccd3f96709bbf6407ac6dc30d9 550 ProSitePatterns PS00211 ABC transporters family signature. 469 483 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_04285 11c395ccd3f96709bbf6407ac6dc30d9 550 SUPERFAMILY SSF52540 341 547 2.31E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_04285 11c395ccd3f96709bbf6407ac6dc30d9 550 Gene3D G3DSA:1.20.1560.10 12 317 1.1E-37 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AL543_04285 11c395ccd3f96709bbf6407ac6dc30d9 550 SUPERFAMILY SSF90123 15 315 2.09E-42 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AL543_04285 11c395ccd3f96709bbf6407ac6dc30d9 550 Pfam PF00005 ABC transporter 348 497 9.7E-23 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_04285 11c395ccd3f96709bbf6407ac6dc30d9 550 Gene3D G3DSA:3.40.50.300 320 550 1.0E-54 T 11-10-2018 AL543_03880 563b676fd3dd5110be8802fa10107158 338 Pfam PF13515 Fusaric acid resistance protein-like 182 310 1.3E-7 T 11-10-2018 AL543_03880 563b676fd3dd5110be8802fa10107158 338 PIRSF PIRSF029594 1 333 7.2E-95 T 11-10-2018 IPR016926 Uncharacterised conserved protein UCP029594 AL543_03880 563b676fd3dd5110be8802fa10107158 338 Pfam PF11168 Protein of unknown function (DUF2955) 3 141 3.0E-46 T 11-10-2018 IPR022604 Protein of unknown function DUF2955 AL543_21310 3df7aeba3e5bf97a967ec4774e0af64c 39 Pfam PF11665 Protein of unknown function (DUF3265) 13 36 1.5E-8 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL543_17260 8801aa09e2f803083b855fd4900070b8 267 SUPERFAMILY SSF53850 36 244 2.5E-9 T 11-10-2018 AL543_02450 8ea4dd02a2a5c99c94ebab1ed56b38fb 74 Pfam PF03889 Domain of unknown function 22 57 5.1E-20 T 11-10-2018 IPR005589 Alternative ribosome-rescue factor A GO:0072344 AL543_16275 bd5b8bd6927aaa83112abcc18361e796 184 Pfam PF06693 Protein of unknown function (DUF1190) 38 180 7.0E-25 T 11-10-2018 IPR009576 Biofilm formation YgiB AL543_16055 4752577361fad14cdc36d75e4383e111 632 ProSitePatterns PS00455 Putative AMP-binding domain signature. 244 255 - T 11-10-2018 IPR020845 AMP-binding, conserved site AL543_16055 4752577361fad14cdc36d75e4383e111 632 SUPERFAMILY SSF56801 9 609 4.45E-156 T 11-10-2018 AL543_16055 4752577361fad14cdc36d75e4383e111 632 Pfam PF13193 AMP-binding enzyme C-terminal domain 517 596 5.0E-25 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL543_16055 4752577361fad14cdc36d75e4383e111 632 Gene3D G3DSA:3.30.300.30 504 631 3.6E-24 T 11-10-2018 AL543_16055 4752577361fad14cdc36d75e4383e111 632 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 11 63 2.0E-16 T 11-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 AL543_16055 4752577361fad14cdc36d75e4383e111 632 Pfam PF00501 AMP-binding enzyme 72 508 5.5E-83 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AL543_16055 4752577361fad14cdc36d75e4383e111 632 Gene3D G3DSA:3.40.50.12780 36 501 1.3E-102 T 11-10-2018 AL543_04080 9b3f14cdedeacd648bc2000068cb8cf5 216 SUPERFAMILY SSF52317 1 215 1.49E-56 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL543_04080 9b3f14cdedeacd648bc2000068cb8cf5 216 Gene3D G3DSA:3.40.50.880 1 216 4.8E-86 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL543_04080 9b3f14cdedeacd648bc2000068cb8cf5 216 PIRSF PIRSF006320 1 216 1.6E-105 T 11-10-2018 IPR026041 Glyoxalase ElbB AL543_06315 8612b701e0d5c064dd71565b49ff50e2 106 Pfam PF01722 BolA-like protein 10 83 8.7E-32 T 11-10-2018 IPR002634 BolA protein AL543_06315 8612b701e0d5c064dd71565b49ff50e2 106 PIRSF PIRSF003113 1 99 2.4E-38 T 11-10-2018 IPR002634 BolA protein AL543_06315 8612b701e0d5c064dd71565b49ff50e2 106 SUPERFAMILY SSF82657 1 89 3.92E-32 T 11-10-2018 IPR036065 BolA-like superfamily AL543_06315 8612b701e0d5c064dd71565b49ff50e2 106 Gene3D G3DSA:3.30.300.90 1 89 1.8E-35 T 11-10-2018 AL543_16590 e6f96d84839c17808b29c2db143898ff 219 Pfam PF11205 Protein of unknown function (DUF2987) 22 165 9.3E-53 T 11-10-2018 IPR021370 Protein of unknown function DUF2987 AL543_08190 b5ce92aa7ec779a4329ec023912047be 116 SUPERFAMILY SSF55331 2 115 9.44E-35 T 11-10-2018 IPR014347 Tautomerase/MIF superfamily AL543_08190 b5ce92aa7ec779a4329ec023912047be 116 Gene3D G3DSA:3.30.429.10 1 115 5.4E-32 T 11-10-2018 IPR014347 Tautomerase/MIF superfamily AL543_08190 b5ce92aa7ec779a4329ec023912047be 116 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 92 3.8E-5 T 11-10-2018 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10 AL543_19345 3cdee963db91867c989290f641a1e556 255 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AL543_19345 3cdee963db91867c989290f641a1e556 255 Pfam PF01026 TatD related DNase 3 253 5.9E-80 T 11-10-2018 IPR001130 TatD family GO:0016788 AL543_19345 3cdee963db91867c989290f641a1e556 255 SUPERFAMILY SSF51556 1 253 1.36E-89 T 11-10-2018 IPR032466 Metal-dependent hydrolase AL543_19345 3cdee963db91867c989290f641a1e556 255 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 253 1.5E-93 T 11-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 AL543_19345 3cdee963db91867c989290f641a1e556 255 Gene3D G3DSA:3.20.20.140 1 255 1.2E-100 T 11-10-2018 AL543_19345 3cdee963db91867c989290f641a1e556 255 PIRSF PIRSF005902 1 255 4.2E-83 T 11-10-2018 IPR001130 TatD family GO:0016788 AL543_19345 3cdee963db91867c989290f641a1e556 255 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AL543_07010 2f766ada5e0e72bba93c58f10faa9208 420 Pfam PF01384 Phosphate transporter family 26 407 8.3E-112 T 11-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 AL543_06245 6484a98983f3078cbdaaab7caf94b1d8 362 SUPERFAMILY SSF53187 34 328 7.94E-78 T 11-10-2018 AL543_06245 6484a98983f3078cbdaaab7caf94b1d8 362 Gene3D G3DSA:3.40.630.10 28 329 1.2E-95 T 11-10-2018 AL543_06245 6484a98983f3078cbdaaab7caf94b1d8 362 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 59 326 3.5E-69 T 11-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 AL543_06245 6484a98983f3078cbdaaab7caf94b1d8 362 PIRSF PIRSF039012 13 334 5.8E-94 T 11-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 AL543_08170 b97c6e7abfdbf5cdcbe73ad6abecee77 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 24.398 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL543_08170 b97c6e7abfdbf5cdcbe73ad6abecee77 96 Gene3D G3DSA:2.30.33.40 1 96 1.0E-36 T 11-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 AL543_08170 b97c6e7abfdbf5cdcbe73ad6abecee77 96 PRINTS PR00297 10kDa chaperonin signature 25 46 3.0E-27 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL543_08170 b97c6e7abfdbf5cdcbe73ad6abecee77 96 PRINTS PR00297 10kDa chaperonin signature 3 18 3.0E-27 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL543_08170 b97c6e7abfdbf5cdcbe73ad6abecee77 96 PRINTS PR00297 10kDa chaperonin signature 60 72 3.0E-27 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL543_08170 b97c6e7abfdbf5cdcbe73ad6abecee77 96 PRINTS PR00297 10kDa chaperonin signature 82 95 3.0E-27 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL543_08170 b97c6e7abfdbf5cdcbe73ad6abecee77 96 SUPERFAMILY SSF50129 1 96 2.24E-31 T 11-10-2018 IPR011032 GroES-like superfamily AL543_08170 b97c6e7abfdbf5cdcbe73ad6abecee77 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 11-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 AL543_08170 b97c6e7abfdbf5cdcbe73ad6abecee77 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 8.3E-31 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL543_08170 b97c6e7abfdbf5cdcbe73ad6abecee77 96 SMART SM00883 2 95 2.9E-49 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL543_17060 5c8529f71ef31e94e247ee48b381936d 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.3E-20 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL543_17060 5c8529f71ef31e94e247ee48b381936d 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 8.2E-6 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL543_17060 5c8529f71ef31e94e247ee48b381936d 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 8.2E-6 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL543_17060 5c8529f71ef31e94e247ee48b381936d 335 Gene3D G3DSA:1.10.260.40 1 54 5.1E-24 T 11-10-2018 AL543_17060 5c8529f71ef31e94e247ee48b381936d 335 SUPERFAMILY SSF53822 61 331 7.33E-74 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AL543_17060 5c8529f71ef31e94e247ee48b381936d 335 Pfam PF13377 Periplasmic binding protein-like domain 170 330 1.8E-34 T 11-10-2018 AL543_17060 5c8529f71ef31e94e247ee48b381936d 335 Gene3D G3DSA:3.40.50.2300 55 305 6.3E-70 T 11-10-2018 AL543_17060 5c8529f71ef31e94e247ee48b381936d 335 SUPERFAMILY SSF47413 1 60 5.34E-18 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL543_17060 5c8529f71ef31e94e247ee48b381936d 335 SMART SM00354 1 71 2.5E-34 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL543_17060 5c8529f71ef31e94e247ee48b381936d 335 Gene3D G3DSA:3.40.50.2300 161 290 6.3E-70 T 11-10-2018 AL543_10070 232930e7bc6b676433d5612a8df57ae0 588 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 54 580 2.0E-140 T 11-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 AL543_10070 232930e7bc6b676433d5612a8df57ae0 588 Gene3D G3DSA:3.60.20.40 411 588 3.1E-57 T 11-10-2018 AL543_10070 232930e7bc6b676433d5612a8df57ae0 588 Gene3D G3DSA:1.10.246.130 286 410 5.4E-37 T 11-10-2018 AL543_10070 232930e7bc6b676433d5612a8df57ae0 588 Pfam PF01019 Gamma-glutamyltranspeptidase 68 583 1.1E-164 T 11-10-2018 AL543_10070 232930e7bc6b676433d5612a8df57ae0 588 SUPERFAMILY SSF56235 44 587 3.86E-172 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL543_10070 232930e7bc6b676433d5612a8df57ae0 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 75 100 5.2E-64 T 11-10-2018 AL543_10070 232930e7bc6b676433d5612a8df57ae0 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 300 319 5.2E-64 T 11-10-2018 AL543_10070 232930e7bc6b676433d5612a8df57ae0 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 150 168 5.2E-64 T 11-10-2018 AL543_10070 232930e7bc6b676433d5612a8df57ae0 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 431 449 5.2E-64 T 11-10-2018 AL543_10070 232930e7bc6b676433d5612a8df57ae0 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 168 187 5.2E-64 T 11-10-2018 AL543_10070 232930e7bc6b676433d5612a8df57ae0 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 409 427 5.2E-64 T 11-10-2018 AL543_10070 232930e7bc6b676433d5612a8df57ae0 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 467 482 5.2E-64 T 11-10-2018 AL543_10070 232930e7bc6b676433d5612a8df57ae0 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 491 508 5.2E-64 T 11-10-2018 AL543_10070 232930e7bc6b676433d5612a8df57ae0 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 270 286 5.2E-64 T 11-10-2018 AL543_12015 4adf52355a0c5a844cc1eff5419ae576 211 Gene3D G3DSA:3.40.30.10 11 202 1.4E-76 T 11-10-2018 AL543_12015 4adf52355a0c5a844cc1eff5419ae576 211 SUPERFAMILY SSF52833 11 110 5.91E-23 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL543_12015 4adf52355a0c5a844cc1eff5419ae576 211 Pfam PF00043 Glutathione S-transferase, C-terminal domain 122 194 2.5E-6 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal AL543_12015 4adf52355a0c5a844cc1eff5419ae576 211 Pfam PF13417 Glutathione S-transferase, N-terminal domain 13 87 1.9E-17 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL543_12015 4adf52355a0c5a844cc1eff5419ae576 211 SUPERFAMILY SSF47616 82 208 1.56E-23 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AL543_12015 4adf52355a0c5a844cc1eff5419ae576 211 Gene3D G3DSA:1.20.1050.10 89 193 1.4E-76 T 11-10-2018 AL543_02895 bfb5e4020c152c68bc672c9c9b968cbf 104 Pfam PF02656 Domain of unknown function (DUF202) 11 59 5.8E-7 T 11-10-2018 IPR003807 Domain of unknown function DUF202 AL543_16310 125d5502bef0425069bc203500de4eeb 450 Gene3D G3DSA:3.30.420.40 379 433 1.2E-9 T 11-10-2018 AL543_16310 125d5502bef0425069bc203500de4eeb 450 Pfam PF00012 Hsp70 protein 129 259 5.7E-12 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL543_16310 125d5502bef0425069bc203500de4eeb 450 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 213 226 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AL543_16310 125d5502bef0425069bc203500de4eeb 450 SUPERFAMILY SSF53067 207 447 1.94E-29 T 11-10-2018 AL543_16310 125d5502bef0425069bc203500de4eeb 450 Gene3D G3DSA:3.90.640.10 336 378 1.2E-9 T 11-10-2018 AL543_16310 125d5502bef0425069bc203500de4eeb 450 SUPERFAMILY SSF53067 1 205 1.0E-25 T 11-10-2018 AL543_20365 1f5c56eca4d34b7bb7e976c0ec6f7e05 107 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 4 102 3.7E-24 T 11-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 AL543_20365 1f5c56eca4d34b7bb7e976c0ec6f7e05 107 SUPERFAMILY SSF101498 2 101 1.7E-20 T 11-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily AL543_20365 1f5c56eca4d34b7bb7e976c0ec6f7e05 107 Pfam PF04316 Anti-sigma-28 factor, FlgM 45 98 1.7E-17 T 11-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal AL543_12370 5a666169a0d56a0e4018c02663db9a06 135 Pfam PF01047 MarR family 30 87 6.2E-13 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL543_12370 5a666169a0d56a0e4018c02663db9a06 135 Gene3D G3DSA:1.10.10.10 2 135 4.4E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_12370 5a666169a0d56a0e4018c02663db9a06 135 SMART SM00347 22 123 3.0E-13 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL543_12370 5a666169a0d56a0e4018c02663db9a06 135 SUPERFAMILY SSF46785 11 133 9.52E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_12370 5a666169a0d56a0e4018c02663db9a06 135 PRINTS PR00598 Bacterial regulatory protein MarR family signature 113 133 1.1E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL543_12370 5a666169a0d56a0e4018c02663db9a06 135 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 79 1.1E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL543_12370 5a666169a0d56a0e4018c02663db9a06 135 PRINTS PR00598 Bacterial regulatory protein MarR family signature 47 63 1.1E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL543_12370 5a666169a0d56a0e4018c02663db9a06 135 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 99 1.1E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL543_12770 8447ddd11c07e29c07174781e7dbbc88 238 Pfam PF13580 SIS domain 3 138 1.2E-35 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL543_12770 8447ddd11c07e29c07174781e7dbbc88 238 SUPERFAMILY SSF53697 1 198 1.82E-27 T 11-10-2018 AL543_12770 8447ddd11c07e29c07174781e7dbbc88 238 Gene3D G3DSA:3.40.50.10490 1 232 1.0E-68 T 11-10-2018 AL543_19340 396254503b3745167fa4e9382973dc76 500 Gene3D G3DSA:3.30.1360.60 418 499 4.0E-30 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AL543_19340 396254503b3745167fa4e9382973dc76 500 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 26 497 8.9E-199 T 11-10-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0016021|GO:1904659 AL543_19340 396254503b3745167fa4e9382973dc76 500 Pfam PF02378 Phosphotransferase system, EIIC 37 342 5.6E-75 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL543_19340 396254503b3745167fa4e9382973dc76 500 Pfam PF00367 phosphotransferase system, EIIB 426 458 1.0E-12 T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL543_19340 396254503b3745167fa4e9382973dc76 500 SUPERFAMILY SSF55604 423 496 9.81E-21 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AL543_19340 396254503b3745167fa4e9382973dc76 500 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 436 453 - T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL543_19340 396254503b3745167fa4e9382973dc76 500 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 400 482 4.2E-21 T 11-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AL543_01890 67e1909078d2e93dc2b99b1d4fc42648 398 SUPERFAMILY SSF56935 27 398 1.83E-111 T 11-10-2018 AL543_01890 67e1909078d2e93dc2b99b1d4fc42648 398 Pfam PF02264 LamB porin 29 398 7.7E-106 T 11-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 AL543_01890 67e1909078d2e93dc2b99b1d4fc42648 398 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 34 376 2.0E-158 T 11-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 AL543_01890 67e1909078d2e93dc2b99b1d4fc42648 398 Gene3D G3DSA:2.40.170.10 27 398 4.6E-113 T 11-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 AL543_07945 060838dbaacdfd8408c9424692cd779e 339 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 338 1.3E-133 T 11-10-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 AL543_07945 060838dbaacdfd8408c9424692cd779e 339 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 338 2.2E-132 T 11-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 AL543_07945 060838dbaacdfd8408c9424692cd779e 339 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 337 2.0E-139 T 11-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 AL543_07945 060838dbaacdfd8408c9424692cd779e 339 Gene3D G3DSA:3.40.630.30 1 274 1.4E-113 T 11-10-2018 AL543_07945 060838dbaacdfd8408c9424692cd779e 339 SUPERFAMILY SSF55729 1 337 4.06E-129 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL543_19795 38f5dfc73ff812210494e2494d0704b3 257 Gene3D G3DSA:3.40.50.1820 5 254 9.8E-66 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL543_19795 38f5dfc73ff812210494e2494d0704b3 257 Pfam PF12697 Alpha/beta hydrolase family 16 247 1.1E-23 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AL543_19795 38f5dfc73ff812210494e2494d0704b3 257 SUPERFAMILY SSF53474 5 254 1.0E-49 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL543_19795 38f5dfc73ff812210494e2494d0704b3 257 PRINTS PR00412 Epoxide hydrolase signature 39 54 6.2E-5 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL543_19795 38f5dfc73ff812210494e2494d0704b3 257 PRINTS PR00412 Epoxide hydrolase signature 230 252 6.2E-5 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL543_19795 38f5dfc73ff812210494e2494d0704b3 257 PRINTS PR00412 Epoxide hydrolase signature 82 95 6.2E-5 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL543_05700 43fa153d6c26c858173d08a5601dd909 389 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 119 136 4.1E-18 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AL543_05700 43fa153d6c26c858173d08a5601dd909 389 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 146 159 4.1E-18 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AL543_05700 43fa153d6c26c858173d08a5601dd909 389 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 63 74 4.1E-18 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AL543_05700 43fa153d6c26c858173d08a5601dd909 389 Gene3D G3DSA:3.40.710.10 22 278 1.8E-88 T 11-10-2018 AL543_05700 43fa153d6c26c858173d08a5601dd909 389 SMART SM00936 280 370 3.7E-30 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL543_05700 43fa153d6c26c858173d08a5601dd909 389 SUPERFAMILY SSF69189 280 372 5.69E-23 T 11-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL543_05700 43fa153d6c26c858173d08a5601dd909 389 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 29 260 8.0E-87 T 11-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AL543_05700 43fa153d6c26c858173d08a5601dd909 389 SUPERFAMILY SSF56601 7 280 1.15E-82 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AL543_05700 43fa153d6c26c858173d08a5601dd909 389 Gene3D G3DSA:2.60.410.10 280 370 1.5E-25 T 11-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL543_05700 43fa153d6c26c858173d08a5601dd909 389 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 280 370 9.3E-24 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL543_19555 e7b2cb0fd5f94aa84f025b3a010954d5 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 6.0E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_19555 e7b2cb0fd5f94aa84f025b3a010954d5 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 6.0E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_19555 e7b2cb0fd5f94aa84f025b3a010954d5 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 6.0E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_19555 e7b2cb0fd5f94aa84f025b3a010954d5 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 6.0E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_19555 e7b2cb0fd5f94aa84f025b3a010954d5 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 6.0E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_19555 e7b2cb0fd5f94aa84f025b3a010954d5 226 SUPERFAMILY SSF51735 3 190 4.26E-27 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_19555 e7b2cb0fd5f94aa84f025b3a010954d5 226 Pfam PF00106 short chain dehydrogenase 10 190 8.1E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_19555 e7b2cb0fd5f94aa84f025b3a010954d5 226 Gene3D G3DSA:3.40.50.720 1 224 1.6E-28 T 11-10-2018 AL543_18325 da4986c9542fac9dbe9c860a6cd6de94 104 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 24 99 3.8E-29 T 11-10-2018 IPR011846 Cyd operon protein YbgE AL543_18325 da4986c9542fac9dbe9c860a6cd6de94 104 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 11 103 2.7E-37 T 11-10-2018 IPR011846 Cyd operon protein YbgE AL543_18525 b6cfec9a3244982f4f14ebb27e73bde6 251 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 248 46.73 T 11-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 AL543_18525 b6cfec9a3244982f4f14ebb27e73bde6 251 SUPERFAMILY SSF53448 1 250 1.01E-65 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL543_18525 b6cfec9a3244982f4f14ebb27e73bde6 251 Pfam PF02348 Cytidylyltransferase 5 221 6.1E-65 T 11-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 AL543_18525 b6cfec9a3244982f4f14ebb27e73bde6 251 Gene3D G3DSA:3.90.550.10 1 250 6.2E-98 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL543_18525 b6cfec9a3244982f4f14ebb27e73bde6 251 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 241 2.5E-116 T 11-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 AL543_14805 179e6e76b897e8ec354fe5b92cda7da6 150 Pfam PF04217 Protein of unknown function, DUF412 8 146 2.6E-59 T 11-10-2018 IPR007334 Uncharacterised protein family UPF0208 AL543_14805 179e6e76b897e8ec354fe5b92cda7da6 150 Hamap MF_01101 UPF0208 membrane protein YfbV [yfbV]. 5 150 35.947 T 11-10-2018 IPR007334 Uncharacterised protein family UPF0208 AL543_14395 5393416f53eac0d3c3aa1da67a864205 109 Pfam PF02575 YbaB/EbfC DNA-binding family 11 100 8.4E-36 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AL543_14395 5393416f53eac0d3c3aa1da67a864205 109 PIRSF PIRSF004555 3 109 4.9E-40 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AL543_14395 5393416f53eac0d3c3aa1da67a864205 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 98 23.506 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AL543_14395 5393416f53eac0d3c3aa1da67a864205 109 SUPERFAMILY SSF82607 11 103 1.12E-36 T 11-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily AL543_14395 5393416f53eac0d3c3aa1da67a864205 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 105 2.7E-39 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AL543_14395 5393416f53eac0d3c3aa1da67a864205 109 Gene3D G3DSA:3.30.1310.10 1 109 3.4E-48 T 11-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily AL543_15515 b6367d95d8175450882deca3f23f8f55 202 SUPERFAMILY SSF53254 1 195 8.99E-33 T 11-10-2018 IPR029033 Histidine phosphatase superfamily AL543_15515 b6367d95d8175450882deca3f23f8f55 202 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 190 1.2E-29 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AL543_15515 b6367d95d8175450882deca3f23f8f55 202 Gene3D G3DSA:3.40.50.1240 1 200 8.3E-45 T 11-10-2018 IPR029033 Histidine phosphatase superfamily AL543_15515 b6367d95d8175450882deca3f23f8f55 202 SMART SM00855 3 151 1.7E-8 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AL543_15515 b6367d95d8175450882deca3f23f8f55 202 PIRSF PIRSF000709 3 185 0.0016 T 11-10-2018 AL543_04840 e0279f3927fdfbb96b5fef15add8451d 59 Pfam PF04875 Protein of unknown function, DUF645 1 59 8.3E-36 T 11-10-2018 IPR006959 Protein of unknown function DUF645 AL543_05570 e0279f3927fdfbb96b5fef15add8451d 59 Pfam PF04875 Protein of unknown function, DUF645 1 59 8.3E-36 T 11-10-2018 IPR006959 Protein of unknown function DUF645 AL543_01920 1954c27ae9a58750383da07c316a023c 119 Pfam PF04219 Protein of unknown function, DUF 12 100 4.0E-35 T 11-10-2018 IPR007335 Protein of unknown function DUF413 AL543_15575 ca44ad18079b27598ccef02cb40e89b4 377 SUPERFAMILY SSF47240 3 341 7.66E-112 T 11-10-2018 IPR009078 Ferritin-like superfamily AL543_15575 ca44ad18079b27598ccef02cb40e89b4 377 Gene3D G3DSA:1.10.620.20 2 341 7.5E-145 T 11-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 AL543_15575 ca44ad18079b27598ccef02cb40e89b4 377 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 11-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL543_15575 ca44ad18079b27598ccef02cb40e89b4 377 Pfam PF00268 Ribonucleotide reductase, small chain 32 333 9.2E-49 T 11-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL543_12185 6d674afaf5e8389cdc3e6097cd7994d4 573 SUPERFAMILY SSF48208 80 564 4.64E-94 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AL543_12185 6d674afaf5e8389cdc3e6097cd7994d4 573 Gene3D G3DSA:2.60.40.10 1 93 5.6E-24 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL543_12185 6d674afaf5e8389cdc3e6097cd7994d4 573 Gene3D G3DSA:1.50.10.10 94 573 7.9E-226 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 AL543_12185 6d674afaf5e8389cdc3e6097cd7994d4 573 Pfam PF02927 Cellulase N-terminal ig-like domain 5 84 7.6E-11 T 11-10-2018 IPR004197 Cellulase, Ig-like domain GO:0005975|GO:0008810 AL543_12185 6d674afaf5e8389cdc3e6097cd7994d4 573 SUPERFAMILY SSF81296 3 91 2.45E-16 T 11-10-2018 IPR014756 Immunoglobulin E-set AL543_12185 6d674afaf5e8389cdc3e6097cd7994d4 573 Pfam PF00759 Glycosyl hydrolase family 9 100 503 5.1E-23 T 11-10-2018 IPR001701 Glycoside hydrolase family 9 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AL543_13540 ccffaa18d90717c71ea7bb1667c21079 199 SUPERFAMILY SSF55729 24 166 2.09E-23 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL543_13540 ccffaa18d90717c71ea7bb1667c21079 199 Pfam PF13302 Acetyltransferase (GNAT) domain 31 164 6.2E-18 T 11-10-2018 IPR000182 GNAT domain AL543_13540 ccffaa18d90717c71ea7bb1667c21079 199 Gene3D G3DSA:3.40.630.30 17 172 6.8E-24 T 11-10-2018 AL543_16735 ba781f3556eabc1b8ed77aeb0a447383 1613 PIRSF PIRSF036761 1 1610 0.0 T 11-10-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 AL543_16735 ba781f3556eabc1b8ed77aeb0a447383 1613 SUPERFAMILY SSF53223 754 940 2.11E-25 T 11-10-2018 AL543_16735 ba781f3556eabc1b8ed77aeb0a447383 1613 SUPERFAMILY SSF51735 945 1282 6.17E-28 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_16735 ba781f3556eabc1b8ed77aeb0a447383 1613 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 76 1603 0.0 T 11-10-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 AL543_18170 91222d1ee1c58266472517b7bfbfcb3d 168 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 16 160 5.4E-12 T 11-10-2018 IPR009936 Protein of unknown function DUF1468 AL543_09040 05cc6362d7e97d3d1954f4000d10b19e 808 PIRSF PIRSF000437 19 808 0.0 T 11-10-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 AL543_09040 05cc6362d7e97d3d1954f4000d10b19e 808 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 807 32.881 T 11-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 AL543_09040 05cc6362d7e97d3d1954f4000d10b19e 808 SUPERFAMILY SSF69593 283 490 3.53E-26 T 11-10-2018 AL543_09040 05cc6362d7e97d3d1954f4000d10b19e 808 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 11 799 0.0 T 11-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 AL543_09040 05cc6362d7e97d3d1954f4000d10b19e 808 Pfam PF01553 Acyltransferase 289 424 7.2E-23 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AL543_09040 05cc6362d7e97d3d1954f4000d10b19e 808 SMART SM00563 300 427 6.3E-25 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AL543_09040 05cc6362d7e97d3d1954f4000d10b19e 808 PIRSF PIRSF500064 3 808 0.0 T 11-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 AL543_00160 a52c9fbe85d12e99a8c3023805488a27 834 Gene3D G3DSA:2.160.20.10 218 377 1.8E-5 T 11-10-2018 IPR012334 Pectin lyase fold AL543_00160 a52c9fbe85d12e99a8c3023805488a27 834 SUPERFAMILY SSF51126 178 445 3.37E-9 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor AL543_17815 f06e4b815d5dbe393f5a90ebe2c590b9 98 Pfam PF03795 YCII-related domain 1 95 1.8E-30 T 11-10-2018 IPR005545 YCII-related AL543_17815 f06e4b815d5dbe393f5a90ebe2c590b9 98 SUPERFAMILY SSF54909 1 98 1.02E-31 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AL543_17815 f06e4b815d5dbe393f5a90ebe2c590b9 98 Gene3D G3DSA:3.30.70.1060 1 98 1.7E-38 T 11-10-2018 AL543_03065 eb72b38493b8261fc2559af32f943cd8 654 PIRSF PIRSF005091 2 631 1.5E-92 T 11-10-2018 IPR012160 Lipoteichoic acid synthase-like AL543_03065 eb72b38493b8261fc2559af32f943cd8 654 SUPERFAMILY SSF53649 284 593 8.37E-65 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AL543_03065 eb72b38493b8261fc2559af32f943cd8 654 Gene3D G3DSA:3.40.720.10 276 568 1.0E-146 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AL543_03065 eb72b38493b8261fc2559af32f943cd8 654 Gene3D G3DSA:3.30.1120.80 569 644 1.0E-146 T 11-10-2018 AL543_03065 eb72b38493b8261fc2559af32f943cd8 654 Pfam PF00884 Sulfatase 285 555 4.4E-43 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 AL543_10090 9be885a8a11d2630637c476263da6a22 191 TIGRFAM TIGR04025 PPOX_FMN_DR2398: pyridoxamine 5'-phosphate oxidase, FMN-binding family 8 187 3.9E-63 T 11-10-2018 IPR024029 Pyridoxamine 5-phosphate oxidase, FMN-dependent AL543_10090 9be885a8a11d2630637c476263da6a22 191 Gene3D G3DSA:2.30.110.10 22 147 5.4E-26 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AL543_10090 9be885a8a11d2630637c476263da6a22 191 SUPERFAMILY SSF50475 30 151 1.68E-14 T 11-10-2018 AL543_10090 9be885a8a11d2630637c476263da6a22 191 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 29 122 5.1E-14 T 11-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AL543_02315 2e6783f10fb776577e5c049f7c135e0f 411 Pfam PF03222 Tryptophan/tyrosine permease family 10 398 5.5E-130 T 11-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 AL543_02315 2e6783f10fb776577e5c049f7c135e0f 411 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 16 391 1.3E-132 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL543_02315 2e6783f10fb776577e5c049f7c135e0f 411 PRINTS PR00166 Aromatic amino acid permease signature 322 340 4.9E-81 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL543_02315 2e6783f10fb776577e5c049f7c135e0f 411 PRINTS PR00166 Aromatic amino acid permease signature 46 65 4.9E-81 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL543_02315 2e6783f10fb776577e5c049f7c135e0f 411 PRINTS PR00166 Aromatic amino acid permease signature 19 42 4.9E-81 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL543_02315 2e6783f10fb776577e5c049f7c135e0f 411 PRINTS PR00166 Aromatic amino acid permease signature 151 171 4.9E-81 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL543_02315 2e6783f10fb776577e5c049f7c135e0f 411 PRINTS PR00166 Aromatic amino acid permease signature 189 211 4.9E-81 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL543_02315 2e6783f10fb776577e5c049f7c135e0f 411 PRINTS PR00166 Aromatic amino acid permease signature 227 246 4.9E-81 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL543_02315 2e6783f10fb776577e5c049f7c135e0f 411 PRINTS PR00166 Aromatic amino acid permease signature 343 362 4.9E-81 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL543_02315 2e6783f10fb776577e5c049f7c135e0f 411 PRINTS PR00166 Aromatic amino acid permease signature 91 111 4.9E-81 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL543_02315 2e6783f10fb776577e5c049f7c135e0f 411 PRINTS PR00166 Aromatic amino acid permease signature 288 307 4.9E-81 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL543_18175 7df3918cfdf44df06a2ee9a9a1b8f45a 502 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 20 437 1.5E-128 T 11-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane AL543_19090 9e52e5d50fb8260dfe6b649e41c209a4 105 Gene3D G3DSA:1.10.3340.10 5 105 1.8E-45 T 11-10-2018 IPR036810 SMc04008-like superfamily AL543_19090 9e52e5d50fb8260dfe6b649e41c209a4 105 Pfam PF06844 Protein of unknown function (DUF1244) 35 101 4.1E-36 T 11-10-2018 IPR023163 SMc04008-like domain AL543_19090 9e52e5d50fb8260dfe6b649e41c209a4 105 SUPERFAMILY SSF158757 8 85 3.53E-36 T 11-10-2018 IPR036810 SMc04008-like superfamily AL543_10350 3cea096280b4bf5a08a86cfbe09db983 376 Pfam PF00534 Glycosyl transferases group 1 199 354 7.6E-30 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AL543_10350 3cea096280b4bf5a08a86cfbe09db983 376 Pfam PF13477 Glycosyl transferase 4-like 3 138 1.0E-14 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AL543_10350 3cea096280b4bf5a08a86cfbe09db983 376 SUPERFAMILY SSF53756 13 372 2.33E-63 T 11-10-2018 AL543_10350 3cea096280b4bf5a08a86cfbe09db983 376 Gene3D G3DSA:3.40.50.2000 193 361 5.0E-39 T 11-10-2018 AL543_10350 3cea096280b4bf5a08a86cfbe09db983 376 Gene3D G3DSA:3.40.50.2000 1 187 1.5E-7 T 11-10-2018 AL543_09495 24f0b3794cbb3299c5d6245e1f756e09 129 Pfam PF03899 ATP synthase I chain 15 111 9.5E-18 T 11-10-2018 IPR005598 ATP synthase protein I AL543_20825 13ee464114d94b35f19c9fac22a60474 40 Pfam PF11665 Protein of unknown function (DUF3265) 10 36 1.1E-10 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL543_00330 e6157aed3c208cf7a9452c2e4d827f2a 127 Gene3D G3DSA:3.10.180.10 7 126 2.3E-31 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL543_00330 e6157aed3c208cf7a9452c2e4d827f2a 127 SUPERFAMILY SSF54593 1 126 5.37E-32 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL543_00330 e6157aed3c208cf7a9452c2e4d827f2a 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 124 7.5E-22 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL543_10410 76747eab26caeeacc5253d77540c47d9 132 SUPERFAMILY SSF46955 2 121 2.05E-35 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AL543_10410 76747eab26caeeacc5253d77540c47d9 132 Pfam PF09278 MerR, DNA binding 45 109 1.4E-18 T 11-10-2018 IPR015358 Transcription regulator MerR, DNA binding AL543_10410 76747eab26caeeacc5253d77540c47d9 132 ProSitePatterns PS00552 MerR-type HTH domain signature. 5 27 - T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL543_10410 76747eab26caeeacc5253d77540c47d9 132 Gene3D G3DSA:1.10.1660.10 1 130 1.3E-37 T 11-10-2018 AL543_10410 76747eab26caeeacc5253d77540c47d9 132 Pfam PF00376 MerR family regulatory protein 4 40 3.0E-16 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL543_10410 76747eab26caeeacc5253d77540c47d9 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 1.5E-12 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL543_10410 76747eab26caeeacc5253d77540c47d9 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 1.5E-12 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL543_10410 76747eab26caeeacc5253d77540c47d9 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 1.5E-12 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL543_10410 76747eab26caeeacc5253d77540c47d9 132 SMART SM00422 2 71 1.0E-31 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL543_10410 76747eab26caeeacc5253d77540c47d9 132 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 132 4.2E-63 T 11-10-2018 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 AL543_13005 112b9fceb25cab4dd1cc75b9aefd3f24 335 SMART SM00530 26 87 8.0E-4 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL543_13005 112b9fceb25cab4dd1cc75b9aefd3f24 335 SUPERFAMILY SSF47413 22 92 5.91E-8 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL543_13005 112b9fceb25cab4dd1cc75b9aefd3f24 335 Pfam PF13413 Helix-turn-helix domain 27 86 5.4E-18 T 11-10-2018 AL543_13005 112b9fceb25cab4dd1cc75b9aefd3f24 335 Gene3D G3DSA:1.10.260.40 13 122 6.4E-23 T 11-10-2018 AL543_13005 112b9fceb25cab4dd1cc75b9aefd3f24 335 Pfam PF13464 Domain of unknown function (DUF4115) 261 334 9.4E-25 T 11-10-2018 IPR025194 Domain of unknown function DUF4115 AL543_06425 1445ee55a5c186a7133f3d96883d8705 322 Gene3D G3DSA:1.50.10.150 5 319 9.6E-42 T 11-10-2018 IPR038665 Voltage-dependent anion channel superfamily AL543_06425 1445ee55a5c186a7133f3d96883d8705 322 Pfam PF03595 Voltage-dependent anion channel 19 308 7.1E-31 T 11-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 AL543_01450 439d207fa3eccd95045481231d3e695a 290 SUPERFAMILY SSF109604 17 242 1.95E-58 T 11-10-2018 AL543_01450 439d207fa3eccd95045481231d3e695a 290 Pfam PF08668 HDOD domain 27 218 1.9E-53 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD AL543_01450 439d207fa3eccd95045481231d3e695a 290 Gene3D G3DSA:1.10.3210.10 15 288 1.8E-70 T 11-10-2018 AL543_09060 93a228e0bf418a4b1ee2f08a36cb038b 249 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 86 104 1.3E-51 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AL543_09060 93a228e0bf418a4b1ee2f08a36cb038b 249 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 9 36 1.3E-51 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AL543_09060 93a228e0bf418a4b1ee2f08a36cb038b 249 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 104 130 1.3E-51 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AL543_09060 93a228e0bf418a4b1ee2f08a36cb038b 249 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 155 183 1.3E-51 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AL543_09060 93a228e0bf418a4b1ee2f08a36cb038b 249 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 10 227 3.7E-75 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AL543_09060 93a228e0bf418a4b1ee2f08a36cb038b 249 ProSitePatterns PS01218 TatC family signature. 155 174 - T 11-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site AL543_09060 93a228e0bf418a4b1ee2f08a36cb038b 249 Pfam PF00902 Sec-independent protein translocase protein (TatC) 13 222 7.5E-67 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AL543_09060 93a228e0bf418a4b1ee2f08a36cb038b 249 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 5 239 16.032 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AL543_18620 77dd9b9c3b8f335b5b0f066b15371ad3 116 Pfam PF01230 HIT domain 12 109 1.1E-28 T 11-10-2018 IPR001310 Histidine triad (HIT) protein AL543_18620 77dd9b9c3b8f335b5b0f066b15371ad3 116 PRINTS PR00332 Histidine triad family signature 27 45 1.3E-18 T 11-10-2018 IPR001310 Histidine triad (HIT) protein AL543_18620 77dd9b9c3b8f335b5b0f066b15371ad3 116 PRINTS PR00332 Histidine triad family signature 6 22 1.3E-18 T 11-10-2018 IPR001310 Histidine triad (HIT) protein AL543_18620 77dd9b9c3b8f335b5b0f066b15371ad3 116 PRINTS PR00332 Histidine triad family signature 95 105 1.3E-18 T 11-10-2018 IPR001310 Histidine triad (HIT) protein AL543_18620 77dd9b9c3b8f335b5b0f066b15371ad3 116 Gene3D G3DSA:3.30.428.10 1 111 2.5E-34 T 11-10-2018 IPR036265 HIT-like superfamily AL543_18620 77dd9b9c3b8f335b5b0f066b15371ad3 116 SUPERFAMILY SSF54197 2 113 9.74E-35 T 11-10-2018 IPR036265 HIT-like superfamily AL543_18620 77dd9b9c3b8f335b5b0f066b15371ad3 116 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 11-10-2018 IPR019808 Histidine triad, conserved site AL543_18005 c92e285450d911733b433e41930e102f 488 Gene3D G3DSA:3.40.605.10 24 477 6.6E-179 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AL543_18005 c92e285450d911733b433e41930e102f 488 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 259 266 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AL543_18005 c92e285450d911733b433e41930e102f 488 Gene3D G3DSA:3.40.309.10 266 454 6.6E-179 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AL543_18005 c92e285450d911733b433e41930e102f 488 Pfam PF00171 Aldehyde dehydrogenase family 24 481 2.5E-168 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AL543_18005 c92e285450d911733b433e41930e102f 488 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 287 298 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AL543_18005 c92e285450d911733b433e41930e102f 488 SUPERFAMILY SSF53720 6 484 4.45E-169 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AL543_18005 c92e285450d911733b433e41930e102f 488 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 35 480 9.8E-208 T 11-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 AL543_07040 40bd5dafacb5479ebf9b7891a68e38e9 399 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 27 43 - T 11-10-2018 IPR013061 Tryptophan/tryrosine permease, conserved site AL543_07040 40bd5dafacb5479ebf9b7891a68e38e9 399 Pfam PF03222 Tryptophan/tyrosine permease family 13 395 3.3E-104 T 11-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 AL543_07040 40bd5dafacb5479ebf9b7891a68e38e9 399 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 17 388 1.2E-105 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL543_07040 40bd5dafacb5479ebf9b7891a68e38e9 399 PRINTS PR00166 Aromatic amino acid permease signature 158 178 1.1E-77 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL543_07040 40bd5dafacb5479ebf9b7891a68e38e9 399 PRINTS PR00166 Aromatic amino acid permease signature 231 250 1.1E-77 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL543_07040 40bd5dafacb5479ebf9b7891a68e38e9 399 PRINTS PR00166 Aromatic amino acid permease signature 342 361 1.1E-77 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL543_07040 40bd5dafacb5479ebf9b7891a68e38e9 399 PRINTS PR00166 Aromatic amino acid permease signature 92 112 1.1E-77 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL543_07040 40bd5dafacb5479ebf9b7891a68e38e9 399 PRINTS PR00166 Aromatic amino acid permease signature 192 214 1.1E-77 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL543_07040 40bd5dafacb5479ebf9b7891a68e38e9 399 PRINTS PR00166 Aromatic amino acid permease signature 288 307 1.1E-77 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL543_07040 40bd5dafacb5479ebf9b7891a68e38e9 399 PRINTS PR00166 Aromatic amino acid permease signature 321 339 1.1E-77 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL543_07040 40bd5dafacb5479ebf9b7891a68e38e9 399 PRINTS PR00166 Aromatic amino acid permease signature 20 43 1.1E-77 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL543_07040 40bd5dafacb5479ebf9b7891a68e38e9 399 PRINTS PR00166 Aromatic amino acid permease signature 47 66 1.1E-77 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL543_17050 52cf5c21ca094edad33f634f960847be 156 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 152 2.5E-39 T 11-10-2018 IPR004375 YhcH/YjgK/YiaL family AL543_17050 52cf5c21ca094edad33f634f960847be 156 Gene3D G3DSA:2.60.120.370 1 155 6.0E-37 T 11-10-2018 IPR037012 YhcH/YjgK/YiaL superfamily AL543_17050 52cf5c21ca094edad33f634f960847be 156 Pfam PF04074 Domain of unknown function (DUF386) 1 150 2.1E-37 T 11-10-2018 IPR004375 YhcH/YjgK/YiaL family AL543_17050 52cf5c21ca094edad33f634f960847be 156 SUPERFAMILY SSF51197 1 154 1.57E-39 T 11-10-2018 AL543_10045 4e6992d621612a72b5e4e09a6c53b64a 680 Gene3D G3DSA:1.10.1370.40 13 675 1.2E-270 T 11-10-2018 AL543_10045 4e6992d621612a72b5e4e09a6c53b64a 680 SUPERFAMILY SSF55486 1 677 6.84E-211 T 11-10-2018 AL543_10045 4e6992d621612a72b5e4e09a6c53b64a 680 Gene3D G3DSA:1.10.1370.10 140 610 1.2E-270 T 11-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 AL543_10045 4e6992d621612a72b5e4e09a6c53b64a 680 Pfam PF01432 Peptidase family M3 222 677 1.8E-164 T 11-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 AL543_14570 788a8deaa25318d02a053615c2c2b5ac 107 Gene3D G3DSA:1.10.3730.20 1 106 1.6E-22 T 11-10-2018 AL543_14570 788a8deaa25318d02a053615c2c2b5ac 107 SUPERFAMILY SSF103481 6 105 7.85E-16 T 11-10-2018 AL543_14570 788a8deaa25318d02a053615c2c2b5ac 107 Pfam PF00893 Small Multidrug Resistance protein 3 94 1.3E-15 T 11-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 AL543_04770 1818d7aee0fa5d103aa967cbd4100f54 52 Pfam PF04875 Protein of unknown function, DUF645 1 52 1.4E-33 T 11-10-2018 IPR006959 Protein of unknown function DUF645 AL543_19355 6968938e91036d65476f386418adc7f6 212 ProSitePatterns PS01331 Thymidylate kinase signature. 95 107 - T 11-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AL543_19355 6968938e91036d65476f386418adc7f6 212 Hamap MF_00165 Thymidylate kinase [tmk]. 4 206 27.835 T 11-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AL543_19355 6968938e91036d65476f386418adc7f6 212 SUPERFAMILY SSF52540 1 209 7.09E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_19355 6968938e91036d65476f386418adc7f6 212 Pfam PF02223 Thymidylate kinase 8 198 1.8E-57 T 11-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 AL543_19355 6968938e91036d65476f386418adc7f6 212 Gene3D G3DSA:3.40.50.300 3 212 3.6E-64 T 11-10-2018 AL543_19355 6968938e91036d65476f386418adc7f6 212 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 198 4.2E-62 T 11-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AL543_05345 2f5db20796c72f1f87bdab1d6ab42fad 179 Gene3D G3DSA:3.40.50.300 3 161 6.6E-16 T 11-10-2018 AL543_05345 2f5db20796c72f1f87bdab1d6ab42fad 179 SUPERFAMILY SSF52540 5 102 2.57E-14 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_05345 2f5db20796c72f1f87bdab1d6ab42fad 179 Pfam PF01202 Shikimate kinase 12 45 7.6E-5 T 11-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AL543_03290 74e11bf00f15543bb267a8a1f350f5c4 262 Gene3D G3DSA:3.40.50.1820 7 236 1.5E-30 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL543_03290 74e11bf00f15543bb267a8a1f350f5c4 262 Pfam PF01764 Lipase (class 3) 60 204 2.2E-27 T 11-10-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 AL543_03290 74e11bf00f15543bb267a8a1f350f5c4 262 SUPERFAMILY SSF53474 9 247 7.68E-35 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL543_03710 489b07c3bd9cb238f5ecdf713e538c92 419 Gene3D G3DSA:3.40.50.410 144 382 7.9E-10 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AL543_03710 489b07c3bd9cb238f5ecdf713e538c92 419 SUPERFAMILY SSF53300 147 313 1.17E-12 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AL543_00530 76ee2027205f94a866ddf89b33a50517 116 Pfam PF05656 Protein of unknown function (DUF805) 15 107 6.1E-22 T 11-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 AL543_09330 ce4219cd20d7f588f6c4e5093651a743 429 Gene3D G3DSA:3.90.220.20 20 216 7.2E-21 T 11-10-2018 AL543_09330 ce4219cd20d7f588f6c4e5093651a743 429 Gene3D G3DSA:3.90.220.20 229 424 1.3E-31 T 11-10-2018 AL543_09330 ce4219cd20d7f588f6c4e5093651a743 429 SUPERFAMILY SSF116734 223 423 7.85E-35 T 11-10-2018 AL543_09330 ce4219cd20d7f588f6c4e5093651a743 429 SUPERFAMILY SSF116734 9 216 4.41E-25 T 11-10-2018 AL543_09330 ce4219cd20d7f588f6c4e5093651a743 429 Pfam PF01420 Type I restriction modification DNA specificity domain 286 411 3.5E-15 T 11-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 AL543_14625 52008d10e8491e58f46717b52f841c55 387 Gene3D G3DSA:3.40.50.10490 202 373 3.3E-57 T 11-10-2018 AL543_14625 52008d10e8491e58f46717b52f841c55 387 Gene3D G3DSA:3.40.50.10490 5 197 3.0E-58 T 11-10-2018 AL543_14625 52008d10e8491e58f46717b52f841c55 387 SUPERFAMILY SSF53697 19 370 6.77E-52 T 11-10-2018 AL543_14625 52008d10e8491e58f46717b52f841c55 387 TIGRFAM TIGR02815 agaS_fam: putative sugar isomerase, AgaS family 16 379 1.1E-177 T 11-10-2018 IPR014180 Sugar isomerase, AgaS GO:0016853 AL543_14625 52008d10e8491e58f46717b52f841c55 387 Pfam PF01380 SIS domain 59 191 1.4E-15 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL543_08875 8ccea34b194cdded8a51c37f49770bfc 203 SMART SM01144 1 191 8.7E-53 T 11-10-2018 IPR005636 DTW AL543_08875 8ccea34b194cdded8a51c37f49770bfc 203 Pfam PF03942 DTW domain 4 183 3.8E-46 T 11-10-2018 IPR005636 DTW AL543_02030 603989ac3392aba92c61514531856c60 347 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 135 216 1.8E-15 T 11-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 AL543_02030 603989ac3392aba92c61514531856c60 347 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 6 122 6.2E-21 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AL543_02030 603989ac3392aba92c61514531856c60 347 Gene3D G3DSA:3.40.50.720 7 315 8.4E-124 T 11-10-2018 AL543_02030 603989ac3392aba92c61514531856c60 347 Gene3D G3DSA:3.30.360.10 128 329 8.4E-124 T 11-10-2018 AL543_02030 603989ac3392aba92c61514531856c60 347 SUPERFAMILY SSF51735 3 204 4.22E-50 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_03505 afd8b4f58d6c0823de717f463026d500 151 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 11 150 5.7E-66 T 11-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 AL543_03505 afd8b4f58d6c0823de717f463026d500 151 SUPERFAMILY SSF52335 2 150 2.06E-57 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AL543_03505 afd8b4f58d6c0823de717f463026d500 151 Gene3D G3DSA:3.40.50.1380 1 151 1.9E-66 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AL543_03505 afd8b4f58d6c0823de717f463026d500 151 PIRSF PIRSF006614 8 151 9.4E-65 T 11-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 AL543_03505 afd8b4f58d6c0823de717f463026d500 151 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 12 131 32.947 T 11-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 AL543_03505 afd8b4f58d6c0823de717f463026d500 151 Pfam PF02142 MGS-like domain 26 118 2.1E-18 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain AL543_03505 afd8b4f58d6c0823de717f463026d500 151 ProSitePatterns PS01335 Methylglyoxal synthase active site. 65 73 - T 11-10-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 AL543_03505 afd8b4f58d6c0823de717f463026d500 151 SMART SM00851 25 118 4.0E-23 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain AL543_11535 280e76aefa87a73033137c75c273cefc 185 Pfam PF02325 YGGT family 9 78 1.1E-19 T 11-10-2018 IPR003425 CCB3/YggT GO:0016020 AL543_11535 280e76aefa87a73033137c75c273cefc 185 Pfam PF02325 YGGT family 109 173 5.8E-20 T 11-10-2018 IPR003425 CCB3/YggT GO:0016020 AL543_19560 73dadfde840e7364b6a0cfcbba44a8c9 248 Pfam PF04333 MlaA lipoprotein 31 223 5.5E-64 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 AL543_19560 73dadfde840e7364b6a0cfcbba44a8c9 248 PRINTS PR01805 VacJ lipoprotein signature 102 119 1.4E-28 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 AL543_19560 73dadfde840e7364b6a0cfcbba44a8c9 248 PRINTS PR01805 VacJ lipoprotein signature 51 67 1.4E-28 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 AL543_19560 73dadfde840e7364b6a0cfcbba44a8c9 248 PRINTS PR01805 VacJ lipoprotein signature 139 156 1.4E-28 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 AL543_19560 73dadfde840e7364b6a0cfcbba44a8c9 248 PRINTS PR01805 VacJ lipoprotein signature 33 46 1.4E-28 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 AL543_12855 f033fd1915622e4ead91a0d98d47f6c8 731 SUPERFAMILY SSF161098 427 667 8.04E-19 T 11-10-2018 IPR035906 MetI-like superfamily AL543_12855 f033fd1915622e4ead91a0d98d47f6c8 731 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 449 725 4.8E-11 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL543_12855 f033fd1915622e4ead91a0d98d47f6c8 731 SUPERFAMILY SSF50978 80 400 4.39E-8 T 11-10-2018 IPR036322 WD40-repeat-containing domain superfamily GO:0005515 AL543_12855 f033fd1915622e4ead91a0d98d47f6c8 731 Gene3D G3DSA:1.10.3720.10 500 727 2.3E-20 T 11-10-2018 IPR035906 MetI-like superfamily AL543_12795 d0f8ea984608036169fd7b6b9aa5675f 49 Pfam PF08921 Domain of unknown function (DUF1904) 5 46 1.4E-8 T 11-10-2018 IPR015017 Protein of unknown function DUF1904 AL543_12795 d0f8ea984608036169fd7b6b9aa5675f 49 SUPERFAMILY SSF55331 4 46 1.28E-8 T 11-10-2018 IPR014347 Tautomerase/MIF superfamily AL543_12795 d0f8ea984608036169fd7b6b9aa5675f 49 Gene3D G3DSA:3.30.429.10 1 48 4.3E-10 T 11-10-2018 IPR014347 Tautomerase/MIF superfamily AL543_17295 7e1e95dd49a562eac0d43e8833ad3e98 324 SUPERFAMILY SSF111369 114 270 4.84E-5 T 11-10-2018 AL543_17295 7e1e95dd49a562eac0d43e8833ad3e98 324 Gene3D G3DSA:2.40.50.100 42 240 1.1E-32 T 11-10-2018 AL543_17295 7e1e95dd49a562eac0d43e8833ad3e98 324 SUPERFAMILY SSF111369 40 122 2.88E-6 T 11-10-2018 AL543_17295 7e1e95dd49a562eac0d43e8833ad3e98 324 Gene3D G3DSA:1.10.287.470 76 205 1.1E-32 T 11-10-2018 AL543_17295 7e1e95dd49a562eac0d43e8833ad3e98 324 Gene3D G3DSA:2.40.30.170 33 321 1.1E-32 T 11-10-2018 AL543_17295 7e1e95dd49a562eac0d43e8833ad3e98 324 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 54 74 2.0E-5 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL543_17295 7e1e95dd49a562eac0d43e8833ad3e98 324 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 309 324 2.0E-5 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL543_17295 7e1e95dd49a562eac0d43e8833ad3e98 324 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 40 275 1.1E-11 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL543_16600 aae9c91012bee4f1a9caa45c44a0d89c 315 Pfam PF00582 Universal stress protein family 4 148 5.0E-13 T 11-10-2018 IPR006016 UspA AL543_16600 aae9c91012bee4f1a9caa45c44a0d89c 315 Pfam PF00582 Universal stress protein family 176 301 5.5E-16 T 11-10-2018 IPR006016 UspA AL543_16600 aae9c91012bee4f1a9caa45c44a0d89c 315 SUPERFAMILY SSF52402 173 309 3.35E-24 T 11-10-2018 AL543_16600 aae9c91012bee4f1a9caa45c44a0d89c 315 Gene3D G3DSA:3.40.50.12370 1 312 2.4E-112 T 11-10-2018 AL543_16600 aae9c91012bee4f1a9caa45c44a0d89c 315 SUPERFAMILY SSF52402 4 159 9.21E-26 T 11-10-2018 AL543_15825 09cb1898f89bd46c2ea6de12794ba068 205 SUPERFAMILY SSF51161 27 184 2.22E-42 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AL543_15825 09cb1898f89bd46c2ea6de12794ba068 205 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 135 163 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AL543_15825 09cb1898f89bd46c2ea6de12794ba068 205 Gene3D G3DSA:2.160.10.10 7 182 1.1E-51 T 11-10-2018 AL543_15825 09cb1898f89bd46c2ea6de12794ba068 205 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 127 161 5.7E-10 T 11-10-2018 IPR001451 Hexapeptide repeat AL543_20070 0444cf316f8b20450ba0c4e95857c0c1 180 Gene3D G3DSA:3.30.70.260 87 180 2.9E-45 T 11-10-2018 AL543_20070 0444cf316f8b20450ba0c4e95857c0c1 180 Pfam PF13740 ACT domain 3 78 8.6E-24 T 11-10-2018 AL543_20070 0444cf316f8b20450ba0c4e95857c0c1 180 Gene3D G3DSA:3.30.70.260 1 85 2.8E-26 T 11-10-2018 AL543_20070 0444cf316f8b20450ba0c4e95857c0c1 180 PIRSF PIRSF028103 1 178 3.4E-61 T 11-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 AL543_20070 0444cf316f8b20450ba0c4e95857c0c1 180 SUPERFAMILY SSF55021 86 176 3.32E-22 T 11-10-2018 AL543_20070 0444cf316f8b20450ba0c4e95857c0c1 180 SUPERFAMILY SSF55021 1 84 4.2E-18 T 11-10-2018 AL543_06275 da53795d90b10b75cefbf3142ed44a36 334 Gene3D G3DSA:3.10.520.20 16 334 5.7E-113 T 11-10-2018 AL543_06275 da53795d90b10b75cefbf3142ed44a36 334 Pfam PF02424 ApbE family 31 309 4.8E-85 T 11-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 AL543_06275 da53795d90b10b75cefbf3142ed44a36 334 SUPERFAMILY SSF143631 23 332 1.13E-103 T 11-10-2018 IPR003374 ApbE-like superfamily AL543_06275 da53795d90b10b75cefbf3142ed44a36 334 PIRSF PIRSF006268 1 334 6.2E-96 T 11-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 AL543_10235 9ef87bee6465cc6815f85aa996043dcf 252 SUPERFAMILY SSF56112 53 211 3.37E-18 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AL543_10235 9ef87bee6465cc6815f85aa996043dcf 252 Hamap MF_00521 3-deoxy-D-manno-octulosonic acid kinase [kdkA]. 18 250 44.04 T 11-10-2018 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GO:0016773 KEGG: 00540+2.7.1.166|MetaCyc: PWY-7675|MetaCyc: PWY-7676 AL543_10235 9ef87bee6465cc6815f85aa996043dcf 252 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 46 248 2.3E-68 T 11-10-2018 AL543_10235 9ef87bee6465cc6815f85aa996043dcf 252 Gene3D G3DSA:1.10.510.10 155 251 3.4E-15 T 11-10-2018 AL543_09765 8b0330c080e6a8e37024dfd198349e67 158 Hamap MF_00598 Protein Smg [smg]. 2 158 32.953 T 11-10-2018 IPR007456 Smg AL543_09765 8b0330c080e6a8e37024dfd198349e67 158 Pfam PF04361 Protein of unknown function (DUF494) 2 158 1.5E-59 T 11-10-2018 IPR007456 Smg AL543_18035 fa3d4bdd8ca9cb1d4b828510a814037e 243 Gene3D G3DSA:3.40.50.880 1 235 9.4E-55 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL543_18035 fa3d4bdd8ca9cb1d4b828510a814037e 243 SUPERFAMILY SSF52317 1 210 1.05E-38 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL543_18035 fa3d4bdd8ca9cb1d4b828510a814037e 243 Pfam PF03575 Peptidase family S51 3 208 1.3E-49 T 11-10-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 AL543_02960 ca978fa26806be8cdc0386bf01de5393 143 Gene3D G3DSA:3.40.1650.10 1 142 5.3E-47 T 11-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 AL543_02960 ca978fa26806be8cdc0386bf01de5393 143 SUPERFAMILY SSF102546 1 141 1.7E-40 T 11-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 AL543_02960 ca978fa26806be8cdc0386bf01de5393 143 Pfam PF05025 RbsD / FucU transport protein family 3 141 7.4E-37 T 11-10-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 AL543_12920 0d0ec4230f51dbe0eadf5a44f70af110 379 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 5 370 2.8E-179 T 11-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AL543_12920 0d0ec4230f51dbe0eadf5a44f70af110 379 SUPERFAMILY SSF51713 3 366 3.01E-165 T 11-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AL543_12920 0d0ec4230f51dbe0eadf5a44f70af110 379 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 3 366 57.722 T 11-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AL543_12920 0d0ec4230f51dbe0eadf5a44f70af110 379 Gene3D G3DSA:3.20.20.105 1 370 9.8E-176 T 11-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AL543_12920 0d0ec4230f51dbe0eadf5a44f70af110 379 Pfam PF01702 Queuine tRNA-ribosyltransferase 128 363 1.8E-96 T 11-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AL543_12920 0d0ec4230f51dbe0eadf5a44f70af110 379 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 5 371 2.3E-188 T 11-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AL543_04340 cb04540d2cc4d7ea190627e8be33ac94 324 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 287 302 2.2E-7 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL543_04340 cb04540d2cc4d7ea190627e8be33ac94 324 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 302 318 2.2E-7 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL543_04340 cb04540d2cc4d7ea190627e8be33ac94 324 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 272 314 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL543_04340 cb04540d2cc4d7ea190627e8be33ac94 324 SMART SM00342 235 318 2.3E-31 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL543_04340 cb04540d2cc4d7ea190627e8be33ac94 324 Pfam PF12833 Helix-turn-helix domain 241 319 4.1E-21 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL543_04340 cb04540d2cc4d7ea190627e8be33ac94 324 SUPERFAMILY SSF46689 272 321 4.93E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_04340 cb04540d2cc4d7ea190627e8be33ac94 324 Gene3D G3DSA:1.10.10.60 215 323 7.3E-27 T 11-10-2018 AL543_07465 d8a9966bbe18621345b2f4c991b8035b 163 Pfam PF02470 MlaD protein 39 118 7.1E-21 T 11-10-2018 IPR003399 Mce/MlaD AL543_07465 d8a9966bbe18621345b2f4c991b8035b 163 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 4 152 1.1E-54 T 11-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 AL543_04280 cbdb9a9d6a1a312712a662206af724cf 233 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 119 229 9.3E-14 T 11-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AL543_04280 cbdb9a9d6a1a312712a662206af724cf 233 Gene3D G3DSA:3.90.470.20 50 136 7.6E-7 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AL543_04280 cbdb9a9d6a1a312712a662206af724cf 233 SUPERFAMILY SSF56214 119 204 2.62E-13 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AL543_04280 cbdb9a9d6a1a312712a662206af724cf 233 PRINTS PR01399 Enterobactin synthetase component D signature 161 177 5.9E-20 T 11-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 AL543_04280 cbdb9a9d6a1a312712a662206af724cf 233 PRINTS PR01399 Enterobactin synthetase component D signature 54 74 5.9E-20 T 11-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 AL543_04280 cbdb9a9d6a1a312712a662206af724cf 233 PRINTS PR01399 Enterobactin synthetase component D signature 84 102 5.9E-20 T 11-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 AL543_15150 2e5e85f090d01a0935068878163af913 192 Pfam PF00265 Thymidine kinase 2 186 1.4E-58 T 11-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 AL543_15150 2e5e85f090d01a0935068878163af913 192 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 34.882 T 11-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 AL543_15150 2e5e85f090d01a0935068878163af913 192 PIRSF PIRSF035805 1 191 2.4E-56 T 11-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 AL543_15150 2e5e85f090d01a0935068878163af913 192 Gene3D G3DSA:3.40.50.300 2 140 2.4E-24 T 11-10-2018 AL543_15150 2e5e85f090d01a0935068878163af913 192 SUPERFAMILY SSF57716 142 189 2.23E-16 T 11-10-2018 AL543_15150 2e5e85f090d01a0935068878163af913 192 SUPERFAMILY SSF52540 2 141 2.98E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_15150 2e5e85f090d01a0935068878163af913 192 Gene3D G3DSA:3.30.60.20 144 189 1.6E-7 T 11-10-2018 AL543_15150 2e5e85f090d01a0935068878163af913 192 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 11-10-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 AL543_15265 0bbc0fbec7b5aec3ec8b7c5917a1ecbc 133 Gene3D G3DSA:3.40.50.300 18 127 7.2E-12 T 11-10-2018 AL543_15265 0bbc0fbec7b5aec3ec8b7c5917a1ecbc 133 SUPERFAMILY SSF52540 22 125 1.33E-7 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_09930 819eb13b6a1c43cbd6db7536b6ed1f02 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 318 6.7E-38 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL543_09930 819eb13b6a1c43cbd6db7536b6ed1f02 325 SUPERFAMILY SSF161098 90 302 1.05E-16 T 11-10-2018 IPR035906 MetI-like superfamily AL543_09930 819eb13b6a1c43cbd6db7536b6ed1f02 325 Gene3D G3DSA:1.10.3720.10 84 314 1.8E-18 T 11-10-2018 IPR035906 MetI-like superfamily AL543_06705 1f348553eb9f8619ef1c2a87ffd19afa 317 Pfam PF03186 CobD/Cbib protein 19 290 8.2E-35 T 11-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 AL543_13215 a72079351e3bcbc4bdbc442f9f4ce2d9 106 Gene3D G3DSA:3.30.70.1240 1 106 1.6E-26 T 11-10-2018 IPR023389 DOPA-like superfamily AL543_13215 a72079351e3bcbc4bdbc442f9f4ce2d9 106 Pfam PF08883 Dopa 4,5-dioxygenase family 2 102 5.6E-26 T 11-10-2018 IPR014980 Dopa 4,5-dioxygenase AL543_13215 a72079351e3bcbc4bdbc442f9f4ce2d9 106 PIRSF PIRSF028139 1 106 6.1E-40 T 11-10-2018 IPR014980 Dopa 4,5-dioxygenase AL543_13215 a72079351e3bcbc4bdbc442f9f4ce2d9 106 SUPERFAMILY SSF143410 1 105 6.28E-34 T 11-10-2018 IPR023389 DOPA-like superfamily AL543_04350 177d656448c03ecdbe1e986bcc8489a8 219 Gene3D G3DSA:1.10.10.60 41 84 1.8E-7 T 11-10-2018 AL543_04375 177d656448c03ecdbe1e986bcc8489a8 219 Gene3D G3DSA:1.10.10.60 41 84 1.8E-7 T 11-10-2018 AL543_09685 5c41e13e41d0afa23578bc61b7fd258f 293 SMART SM00563 85 227 7.8E-24 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AL543_09685 5c41e13e41d0afa23578bc61b7fd258f 293 Pfam PF01553 Acyltransferase 73 226 3.1E-15 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AL543_09685 5c41e13e41d0afa23578bc61b7fd258f 293 SUPERFAMILY SSF69593 23 229 1.24E-28 T 11-10-2018 AL543_16350 dbf3ee4f552926c1a393f34489ca4c30 379 PIRSF PIRSF001439 3 373 1.9E-103 T 11-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 AL543_16350 dbf3ee4f552926c1a393f34489ca4c30 379 Gene3D G3DSA:3.30.1780.10 12 368 8.2E-75 T 11-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 AL543_16350 dbf3ee4f552926c1a393f34489ca4c30 379 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 23 364 2.0E-70 T 11-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 AL543_16350 dbf3ee4f552926c1a393f34489ca4c30 379 Gene3D G3DSA:3.40.50.720 153 346 8.2E-75 T 11-10-2018 AL543_16350 dbf3ee4f552926c1a393f34489ca4c30 379 SUPERFAMILY SSF51735 4 376 1.01E-67 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_05100 7aac30c0ea1cf68c83901bdd3fc3c5cf 111 Gene3D G3DSA:3.30.2310.20 4 105 1.7E-19 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily AL543_05100 7aac30c0ea1cf68c83901bdd3fc3c5cf 111 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 12 99 7.0E-13 T 11-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AL543_16900 1472a39a9bd615b275ab569659b22855 275 Gene3D G3DSA:3.40.190.10 34 258 1.2E-98 T 11-10-2018 AL543_16900 1472a39a9bd615b275ab569659b22855 275 Pfam PF12849 PBP superfamily domain 29 250 5.8E-32 T 11-10-2018 IPR024370 PBP domain AL543_16900 1472a39a9bd615b275ab569659b22855 275 Gene3D G3DSA:3.40.190.10 109 221 1.2E-98 T 11-10-2018 AL543_16900 1472a39a9bd615b275ab569659b22855 275 SUPERFAMILY SSF53850 31 260 6.18E-34 T 11-10-2018 AL543_19065 be4811ea98a712745cfc881dd2fb19a5 102 Gene3D G3DSA:3.10.510.20 9 83 3.4E-31 T 11-10-2018 IPR038068 YcgL-like superfamily AL543_19065 be4811ea98a712745cfc881dd2fb19a5 102 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 11 79 2.0E-33 T 11-10-2018 IPR027354 YcgL domain AL543_19065 be4811ea98a712745cfc881dd2fb19a5 102 SUPERFAMILY SSF160191 6 100 1.57E-38 T 11-10-2018 IPR038068 YcgL-like superfamily AL543_19065 be4811ea98a712745cfc881dd2fb19a5 102 Hamap MF_01866 Protein YcgL [ycgL]. 11 97 28.021 T 11-10-2018 IPR027354 YcgL domain AL543_19065 be4811ea98a712745cfc881dd2fb19a5 102 Pfam PF05166 YcgL domain 13 84 1.6E-32 T 11-10-2018 IPR027354 YcgL domain AL543_07175 14e66d228bb72d920ec124a570f2de80 322 Pfam PF01571 Aminomethyltransferase folate-binding domain 26 137 1.3E-5 T 11-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain AL543_07175 14e66d228bb72d920ec124a570f2de80 322 Gene3D G3DSA:3.30.70.1400 29 115 5.0E-39 T 11-10-2018 AL543_07175 14e66d228bb72d920ec124a570f2de80 322 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 181 245 6.7E-25 T 11-10-2018 IPR017703 YgfZ/GcvT conserved site AL543_07175 14e66d228bb72d920ec124a570f2de80 322 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 1 317 43.208 T 11-10-2018 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 AL543_07175 14e66d228bb72d920ec124a570f2de80 322 SUPERFAMILY SSF103025 15 235 4.87E-56 T 11-10-2018 AL543_07175 14e66d228bb72d920ec124a570f2de80 322 Gene3D G3DSA:2.40.30.160 190 314 1.5E-32 T 11-10-2018 AL543_07175 14e66d228bb72d920ec124a570f2de80 322 Gene3D G3DSA:3.30.70.1630 26 187 5.0E-39 T 11-10-2018 AL543_07175 14e66d228bb72d920ec124a570f2de80 322 SUPERFAMILY SSF101790 237 321 9.15E-20 T 11-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal AL543_04985 ddcd99c31b6f57615d5e54ce42a6b3e1 119 SUPERFAMILY SSF50044 75 117 5.3E-6 T 11-10-2018 IPR036028 SH3-like domain superfamily GO:0005515 AL543_04985 ddcd99c31b6f57615d5e54ce42a6b3e1 119 SUPERFAMILY SSF50044 8 66 3.81E-7 T 11-10-2018 IPR036028 SH3-like domain superfamily GO:0005515 AL543_04985 ddcd99c31b6f57615d5e54ce42a6b3e1 119 PIRSF PIRSF034961 7 119 1.4E-28 T 11-10-2018 IPR014593 Uncharacterised conserved protein UCP034961, SH3-2 AL543_04985 ddcd99c31b6f57615d5e54ce42a6b3e1 119 Pfam PF07653 Variant SH3 domain 9 63 3.9E-6 T 11-10-2018 IPR001452 SH3 domain GO:0005515 AL543_14030 26c1b2efd4f36d59ba91023d371b446c 275 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL543_14030 26c1b2efd4f36d59ba91023d371b446c 275 SUPERFAMILY SSF51735 3 270 1.48E-54 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_14030 26c1b2efd4f36d59ba91023d371b446c 275 Gene3D G3DSA:3.40.50.720 2 262 1.1E-58 T 11-10-2018 AL543_14030 26c1b2efd4f36d59ba91023d371b446c 275 Pfam PF00106 short chain dehydrogenase 3 187 5.0E-38 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_14030 26c1b2efd4f36d59ba91023d371b446c 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 3.3E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_14030 26c1b2efd4f36d59ba91023d371b446c 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.3E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_14030 26c1b2efd4f36d59ba91023d371b446c 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 3.3E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_14030 26c1b2efd4f36d59ba91023d371b446c 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 3.3E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL543_19695 0bd7f012eaafd5318080d3290b0ddde1 76 SUPERFAMILY SSF46785 2 51 6.93E-12 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_19695 0bd7f012eaafd5318080d3290b0ddde1 76 Pfam PF09012 FeoC like transcriptional regulator 2 53 7.7E-13 T 11-10-2018 IPR015102 Transcriptional regulator HTH-type, FeoC AL543_18315 62dc40192760b762b945fc0f8dc7d051 227 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 5 225 43.484 T 11-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 AL543_18315 62dc40192760b762b945fc0f8dc7d051 227 Pfam PF01618 MotA/TolQ/ExbB proton channel family 80 207 3.1E-42 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AL543_18315 62dc40192760b762b945fc0f8dc7d051 227 TIGRFAM TIGR02796 tolQ: protein TolQ 6 220 1.0E-91 T 11-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 AL543_07700 72139dac7b543abbc801ccc5889203c6 191 Pfam PF04225 Opacity-associated protein A LysM-like domain 107 191 8.3E-39 T 11-10-2018 IPR007340 Opacity-associated protein A AL543_07700 72139dac7b543abbc801ccc5889203c6 191 Pfam PF08525 Opacity-associated protein A N-terminal motif 38 64 2.3E-6 T 11-10-2018 IPR013731 Opacity-associated protein A, N-terminal AL543_07700 72139dac7b543abbc801ccc5889203c6 191 Gene3D G3DSA:3.10.450.350 95 189 1.2E-13 T 11-10-2018 AL543_00300 85cd9066fc3e56d5f621a166048ed574 340 Pfam PF15969 Intracellular sensor of Lambda phage, Abi component 41 260 6.9E-11 T 11-10-2018 IPR031894 Abi component, intracellular sensor of Lambda phage RexA AL543_06620 cde06af066d6b2658bd8ce097b17b6e8 125 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 125 1.4E-67 T 11-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA AL543_06620 cde06af066d6b2658bd8ce097b17b6e8 125 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 125 40.997 T 11-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA AL543_06620 cde06af066d6b2658bd8ce097b17b6e8 125 Gene3D G3DSA:3.20.70.20 15 125 3.2E-25 T 11-10-2018 AL543_06620 cde06af066d6b2658bd8ce097b17b6e8 125 Pfam PF01228 Glycine radical 15 106 5.0E-24 T 11-10-2018 IPR001150 Glycine radical domain GO:0003824 AL543_06620 cde06af066d6b2658bd8ce097b17b6e8 125 SUPERFAMILY SSF51998 64 124 1.83E-23 T 11-10-2018 AL543_06620 cde06af066d6b2658bd8ce097b17b6e8 125 ProSitePatterns PS00850 Glycine radical domain signature. 95 103 - T 11-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AL543_06620 cde06af066d6b2658bd8ce097b17b6e8 125 PIRSF PIRSF000378 2 125 6.0E-54 T 11-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA AL543_05110 bf15b8fc4af24aa3a76bff1f2e5604a6 70 Pfam PF12493 Protein of unknown function (DUF3709) 27 59 9.2E-23 T 11-10-2018 IPR022178 Protein of unknown function DUF3709 AL543_09690 21ea5ac14fbb1efd0ba8cec95eda33a5 201 Pfam PF01323 DSBA-like thioredoxin domain 41 187 7.7E-30 T 11-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 AL543_09690 21ea5ac14fbb1efd0ba8cec95eda33a5 201 SUPERFAMILY SSF52833 20 197 3.18E-45 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL543_09690 21ea5ac14fbb1efd0ba8cec95eda33a5 201 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AL543_09690 21ea5ac14fbb1efd0ba8cec95eda33a5 201 PIRSF PIRSF001488 1 200 9.0E-76 T 11-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL AL543_09690 21ea5ac14fbb1efd0ba8cec95eda33a5 201 Gene3D G3DSA:3.40.30.10 17 200 3.8E-56 T 11-10-2018 AL543_08450 4d86518ae6622f83e08f86f5e96e0728 182 Gene3D G3DSA:3.90.79.10 7 182 3.1E-48 T 11-10-2018 AL543_08450 4d86518ae6622f83e08f86f5e96e0728 182 PRINTS PR00502 NUDIX hydrolase family signature 89 104 4.7E-5 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL543_08450 4d86518ae6622f83e08f86f5e96e0728 182 PRINTS PR00502 NUDIX hydrolase family signature 75 89 4.7E-5 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL543_08450 4d86518ae6622f83e08f86f5e96e0728 182 SUPERFAMILY SSF55811 4 177 2.44E-40 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AL543_08450 4d86518ae6622f83e08f86f5e96e0728 182 ProSitePatterns PS00893 Nudix box signature. 80 101 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AL543_08450 4d86518ae6622f83e08f86f5e96e0728 182 Pfam PF00293 NUDIX domain 47 155 7.2E-16 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL543_12640 ef011e375991df5947dece084e502609 359 Pfam PF13416 Bacterial extracellular solute-binding protein 49 308 7.7E-20 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein AL543_12640 ef011e375991df5947dece084e502609 359 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 55 76 3.1E-16 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL543_12640 ef011e375991df5947dece084e502609 359 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 169 188 3.1E-16 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL543_12640 ef011e375991df5947dece084e502609 359 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 39 55 3.1E-16 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL543_12640 ef011e375991df5947dece084e502609 359 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 254 273 3.1E-16 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL543_12640 ef011e375991df5947dece084e502609 359 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 124 140 3.1E-16 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL543_12640 ef011e375991df5947dece084e502609 359 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 299 325 3.1E-16 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL543_12640 ef011e375991df5947dece084e502609 359 Gene3D G3DSA:3.40.190.10 133 327 2.9E-64 T 11-10-2018 AL543_12640 ef011e375991df5947dece084e502609 359 Gene3D G3DSA:3.40.190.10 38 321 2.9E-64 T 11-10-2018 AL543_12640 ef011e375991df5947dece084e502609 359 SUPERFAMILY SSF53850 35 349 2.32E-55 T 11-10-2018 AL543_03920 b3e5c3b688ed62fdbc075875bf49c327 334 Gene3D G3DSA:2.40.50.100 49 189 3.1E-65 T 11-10-2018 AL543_03920 b3e5c3b688ed62fdbc075875bf49c327 334 SUPERFAMILY SSF111369 37 268 2.62E-29 T 11-10-2018 AL543_03920 b3e5c3b688ed62fdbc075875bf49c327 334 Gene3D G3DSA:2.40.30.170 37 267 3.1E-65 T 11-10-2018 AL543_03920 b3e5c3b688ed62fdbc075875bf49c327 334 Gene3D G3DSA:1.10.287.470 87 154 3.1E-65 T 11-10-2018 AL543_03920 b3e5c3b688ed62fdbc075875bf49c327 334 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 26 327 3.8E-67 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL543_03920 b3e5c3b688ed62fdbc075875bf49c327 334 Gene3D G3DSA:2.40.420.20 28 325 3.1E-65 T 11-10-2018 AL543_03920 b3e5c3b688ed62fdbc075875bf49c327 334 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 51 261 2.3E-22 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL543_00550 a43c5279dca06634e8d48725f3c7adc0 518 ProSitePatterns PS00211 ABC transporters family signature. 438 452 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_00550 a43c5279dca06634e8d48725f3c7adc0 518 Pfam PF00005 ABC transporter 20 188 8.8E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_00550 a43c5279dca06634e8d48725f3c7adc0 518 SMART SM00382 345 511 4.1E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_00550 a43c5279dca06634e8d48725f3c7adc0 518 SMART SM00382 28 234 2.0E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_00550 a43c5279dca06634e8d48725f3c7adc0 518 Pfam PF12848 ABC transporter 228 307 3.3E-17 T 11-10-2018 IPR032781 ABC-transporter extension domain AL543_00550 a43c5279dca06634e8d48725f3c7adc0 518 Gene3D G3DSA:3.40.50.300 285 517 4.1E-41 T 11-10-2018 AL543_00550 a43c5279dca06634e8d48725f3c7adc0 518 SUPERFAMILY SSF52540 325 507 5.76E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_00550 a43c5279dca06634e8d48725f3c7adc0 518 Pfam PF00005 ABC transporter 338 465 9.5E-21 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_00550 a43c5279dca06634e8d48725f3c7adc0 518 Gene3D G3DSA:3.40.50.300 3 280 1.3E-61 T 11-10-2018 AL543_00550 a43c5279dca06634e8d48725f3c7adc0 518 SUPERFAMILY SSF52540 8 237 2.15E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_02620 c928c9b5219026f0ef126aa8143e230f 333 Pfam PF05125 Phage major capsid protein, P2 family 12 327 3.1E-99 T 11-10-2018 IPR006441 Bacteriophage P2, GpN, major capsid AL543_02620 c928c9b5219026f0ef126aa8143e230f 333 TIGRFAM TIGR01551 major_capsid_P2: phage major capsid protein, P2 family 12 327 1.8E-88 T 11-10-2018 IPR006441 Bacteriophage P2, GpN, major capsid AL543_04885 537de567752655a1e8d1e745498ec356 94 Pfam PF04221 RelB antitoxin 5 73 1.0E-5 T 11-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ AL543_04885 537de567752655a1e8d1e745498ec356 94 Gene3D G3DSA:1.10.1220.10 2 69 5.9E-6 T 11-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AL543_18915 f0a29a2a649feffa11eabba1a667c9ce 453 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 260 5.7E-86 T 11-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 AL543_18915 f0a29a2a649feffa11eabba1a667c9ce 453 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 437 4.1E-116 T 11-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AL543_18915 f0a29a2a649feffa11eabba1a667c9ce 453 PIRSF PIRSF006066 1 269 4.4E-91 T 11-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 AL543_18915 f0a29a2a649feffa11eabba1a667c9ce 453 PIRSF PIRSF006066 272 447 2.2E-49 T 11-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 AL543_12025 c751ae2c9d09496a0b7e269ad7d44412 189 SMART SM00749 50 113 30.0 T 11-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria AL543_12025 c751ae2c9d09496a0b7e269ad7d44412 189 SMART SM00749 127 189 0.036 T 11-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria AL543_12025 c751ae2c9d09496a0b7e269ad7d44412 189 Pfam PF04972 BON domain 46 112 4.4E-9 T 11-10-2018 IPR007055 BON domain AL543_12025 c751ae2c9d09496a0b7e269ad7d44412 189 Pfam PF04972 BON domain 122 188 1.9E-15 T 11-10-2018 IPR007055 BON domain AL543_06880 47b87ebf63d82e7c9a8264c7e46a1a11 579 Gene3D G3DSA:2.40.50.460 454 579 9.2E-8 T 11-10-2018 AL543_06880 47b87ebf63d82e7c9a8264c7e46a1a11 579 SUPERFAMILY SSF64182 45 463 4.71E-118 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily AL543_06880 47b87ebf63d82e7c9a8264c7e46a1a11 579 Pfam PF02272 DHHA1 domain 319 450 9.5E-28 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 AL543_06880 47b87ebf63d82e7c9a8264c7e46a1a11 579 Gene3D G3DSA:3.90.1640.30 44 323 1.0E-88 T 11-10-2018 AL543_06880 47b87ebf63d82e7c9a8264c7e46a1a11 579 Pfam PF01368 DHH family 71 206 5.0E-9 T 11-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AL543_06880 47b87ebf63d82e7c9a8264c7e46a1a11 579 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 21 575 1.4E-157 T 11-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 AL543_06880 47b87ebf63d82e7c9a8264c7e46a1a11 579 Gene3D G3DSA:3.10.310.30 325 453 1.8E-31 T 11-10-2018 AL543_19645 8c75875534bc62571237dd4d32feeee1 122 SUPERFAMILY SSF52172 1 121 1.57E-37 T 11-10-2018 IPR011006 CheY-like superfamily AL543_19645 8c75875534bc62571237dd4d32feeee1 122 Pfam PF00072 Response regulator receiver domain 3 115 1.1E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_19645 8c75875534bc62571237dd4d32feeee1 122 SMART SM00448 1 115 3.5E-35 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL543_19645 8c75875534bc62571237dd4d32feeee1 122 Gene3D G3DSA:3.40.50.2300 1 122 2.3E-40 T 11-10-2018 AL543_07485 2e8b748f4813f58b07b66fb7e38109f1 319 Gene3D G3DSA:1.20.58.1130 9 206 4.4E-86 T 11-10-2018 AL543_07485 2e8b748f4813f58b07b66fb7e38109f1 319 Pfam PF01699 Sodium/calcium exchanger protein 175 316 1.0E-30 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AL543_07485 2e8b748f4813f58b07b66fb7e38109f1 319 Pfam PF01699 Sodium/calcium exchanger protein 5 144 7.4E-27 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AL543_07485 2e8b748f4813f58b07b66fb7e38109f1 319 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 3 311 5.6E-85 T 11-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 AL543_07485 2e8b748f4813f58b07b66fb7e38109f1 319 Gene3D G3DSA:1.20.1420.30 35 309 4.4E-86 T 11-10-2018 AL543_03395 0abc6c4d4792a8fe4374c1b038f7d445 365 Pfam PF13407 Periplasmic binding protein domain 69 321 5.1E-15 T 11-10-2018 IPR025997 Periplasmic binding protein AL543_03395 0abc6c4d4792a8fe4374c1b038f7d445 365 SUPERFAMILY SSF53822 27 364 3.44E-80 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AL543_03395 0abc6c4d4792a8fe4374c1b038f7d445 365 Gene3D G3DSA:3.40.50.2300 180 359 2.4E-144 T 11-10-2018 AL543_03395 0abc6c4d4792a8fe4374c1b038f7d445 365 Gene3D G3DSA:3.40.50.2300 33 363 2.4E-144 T 11-10-2018 AL543_06835 729ecd49a61ca593acf6fd36093f901f 106 Hamap MF_00910 Cell division protein FtsL [ftsL]. 20 103 16.331 T 11-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 AL543_06835 729ecd49a61ca593acf6fd36093f901f 106 Pfam PF04999 Cell division protein FtsL 9 104 4.7E-35 T 11-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 AL543_06835 729ecd49a61ca593acf6fd36093f901f 106 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 21 104 5.0E-30 T 11-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 AL543_04105 17885f436e9f31bf60b7371c9bba176f 270 Gene3D G3DSA:1.10.150.240 23 101 2.4E-98 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AL543_04105 17885f436e9f31bf60b7371c9bba176f 270 SUPERFAMILY SSF56784 5 260 4.75E-55 T 11-10-2018 IPR036412 HAD-like superfamily AL543_04105 17885f436e9f31bf60b7371c9bba176f 270 Hamap MF_01375 Phosphonoacetaldehyde hydrolase [phnX]. 1 270 140.009 T 11-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 AL543_04105 17885f436e9f31bf60b7371c9bba176f 270 TIGRFAM TIGR01422 phosphonatase: phosphonoacetaldehyde hydrolase 5 258 2.3E-115 T 11-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 AL543_04105 17885f436e9f31bf60b7371c9bba176f 270 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 49 204 3.5E-17 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL543_04105 17885f436e9f31bf60b7371c9bba176f 270 Gene3D G3DSA:3.40.50.1000 7 270 2.4E-98 T 11-10-2018 IPR023214 HAD superfamily AL543_04105 17885f436e9f31bf60b7371c9bba176f 270 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 204 7.0E-10 T 11-10-2018 AL543_07145 a6fa69e563f57b6278a0770009629170 211 Gene3D G3DSA:1.10.10.880 8 73 2.3E-23 T 11-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 AL543_07145 a6fa69e563f57b6278a0770009629170 211 SUPERFAMILY SSF89069 10 73 1.57E-20 T 11-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 AL543_07145 a6fa69e563f57b6278a0770009629170 211 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 7 104 3.9E-33 T 11-10-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 AL543_07145 a6fa69e563f57b6278a0770009629170 211 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 142 194 6.0E-20 T 11-10-2018 IPR005573 Anti sigma-E protein RseA, C-terminal AL543_07145 a6fa69e563f57b6278a0770009629170 211 PIRSF PIRSF016938 3 208 5.1E-36 T 11-10-2018 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0016989 AL543_09110 68d8aaa9497cf52a5786aef6f7f7747d 727 SUPERFAMILY SSF52540 3 581 1.77E-16 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_09110 68d8aaa9497cf52a5786aef6f7f7747d 727 Gene3D G3DSA:3.40.50.300 2 205 7.6E-6 T 11-10-2018 AL543_09110 68d8aaa9497cf52a5786aef6f7f7747d 727 Pfam PF13166 AAA domain 25 693 3.0E-113 T 11-10-2018 IPR026866 Protein CR006, P-loop domain AL543_09110 68d8aaa9497cf52a5786aef6f7f7747d 727 Gene3D G3DSA:3.40.50.300 358 603 3.8E-11 T 11-10-2018 AL543_04270 d815d573d37ac7866c06c60626e2f04b 127 Pfam PF11782 Protein of unknown function (DUF3319) 1 88 9.0E-44 T 11-10-2018 IPR021753 Protein of unknown function DUF3319 AL543_02345 af592fa3625215f70e72c13a0e3daf99 70 Gene3D G3DSA:2.40.50.140 1 70 8.3E-31 T 11-10-2018 AL543_02345 af592fa3625215f70e72c13a0e3daf99 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 6.8E-30 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL543_02345 af592fa3625215f70e72c13a0e3daf99 70 SMART SM00357 6 70 7.7E-30 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 AL543_02345 af592fa3625215f70e72c13a0e3daf99 70 PRINTS PR00050 Cold shock protein signature 28 37 7.1E-17 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL543_02345 af592fa3625215f70e72c13a0e3daf99 70 PRINTS PR00050 Cold shock protein signature 7 22 7.1E-17 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL543_02345 af592fa3625215f70e72c13a0e3daf99 70 PRINTS PR00050 Cold shock protein signature 43 61 7.1E-17 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL543_02345 af592fa3625215f70e72c13a0e3daf99 70 PIRSF PIRSF002599 1 70 9.5E-26 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 AL543_02345 af592fa3625215f70e72c13a0e3daf99 70 SUPERFAMILY SSF50249 3 69 1.76E-25 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL543_02345 af592fa3625215f70e72c13a0e3daf99 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 11-10-2018 IPR019844 Cold-shock conserved site AL543_03330 e0b35cae196eee4638ae2fb39ddaedbd 409 TIGRFAM TIGR03379 glycerol3P_GlpC: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit 12 407 4.7E-226 T 11-10-2018 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit GO:0009061|GO:0016020 AL543_03330 e0b35cae196eee4638ae2fb39ddaedbd 409 Pfam PF13183 4Fe-4S dicluster domain 15 79 1.1E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL543_03330 e0b35cae196eee4638ae2fb39ddaedbd 409 Pfam PF02754 Cysteine-rich domain 175 261 3.1E-13 T 11-10-2018 IPR004017 Cysteine-rich domain AL543_03330 e0b35cae196eee4638ae2fb39ddaedbd 409 Pfam PF02754 Cysteine-rich domain 305 388 1.5E-11 T 11-10-2018 IPR004017 Cysteine-rich domain AL543_03330 e0b35cae196eee4638ae2fb39ddaedbd 409 Gene3D G3DSA:1.10.1060.10 3 96 1.5E-8 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL543_03330 e0b35cae196eee4638ae2fb39ddaedbd 409 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 65 76 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL543_03330 e0b35cae196eee4638ae2fb39ddaedbd 409 SUPERFAMILY SSF46548 15 92 2.28E-16 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL543_06715 011652bc9675e3ccca6cedddb50d8de5 206 Pfam PF03458 UPF0126 domain 8 81 3.7E-22 T 11-10-2018 IPR005115 Uncharacterised domain UPF0126 AL543_06715 011652bc9675e3ccca6cedddb50d8de5 206 Pfam PF03458 UPF0126 domain 95 165 5.6E-19 T 11-10-2018 IPR005115 Uncharacterised domain UPF0126 AL543_16950 6bfcc5bd04fd39f729587265f490c163 166 Gene3D G3DSA:3.90.1720.10 45 161 2.3E-38 T 11-10-2018 AL543_16950 6bfcc5bd04fd39f729587265f490c163 166 Pfam PF00877 NlpC/P60 family 53 157 3.0E-30 T 11-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain AL543_16950 6bfcc5bd04fd39f729587265f490c163 166 SUPERFAMILY SSF54001 42 158 2.99E-39 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily AL543_06460 b8a87df9779b511f26a38d6738ebb646 483 Gene3D G3DSA:3.30.470.20 361 475 1.4E-19 T 11-10-2018 AL543_06460 b8a87df9779b511f26a38d6738ebb646 483 Pfam PF14401 RimK-like ATPgrasp N-terminal domain 27 167 2.9E-42 T 11-10-2018 IPR025839 RimK-like ATPgrasp N-terminal domain AL543_06460 b8a87df9779b511f26a38d6738ebb646 483 Gene3D G3DSA:3.30.1490.20 293 359 1.6E-5 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AL543_06460 b8a87df9779b511f26a38d6738ebb646 483 Pfam PF08443 RimK-like ATP-grasp domain 277 455 8.9E-12 T 11-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 AL543_06460 b8a87df9779b511f26a38d6738ebb646 483 Gene3D G3DSA:3.40.50.20 206 291 1.3E-6 T 11-10-2018 AL543_06460 b8a87df9779b511f26a38d6738ebb646 483 SUPERFAMILY SSF56059 268 476 6.14E-40 T 11-10-2018 AL543_17575 20ec37c694d76ad2e7bfddd18214247f 451 TIGRFAM TIGR00400 mgtE: magnesium transporter 18 447 5.6E-73 T 11-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 AL543_17575 20ec37c694d76ad2e7bfddd18214247f 451 SUPERFAMILY SSF54631 134 271 4.6E-19 T 11-10-2018 AL543_17575 20ec37c694d76ad2e7bfddd18214247f 451 Pfam PF01769 Divalent cation transporter 319 440 3.0E-25 T 11-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AL543_17575 20ec37c694d76ad2e7bfddd18214247f 451 SUPERFAMILY SSF158791 22 131 1.96E-5 T 11-10-2018 AL543_17575 20ec37c694d76ad2e7bfddd18214247f 451 Pfam PF00571 CBS domain 200 247 0.0012 T 11-10-2018 IPR000644 CBS domain AL543_17575 20ec37c694d76ad2e7bfddd18214247f 451 SUPERFAMILY SSF161093 276 447 8.89E-48 T 11-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 AL543_17575 20ec37c694d76ad2e7bfddd18214247f 451 Gene3D G3DSA:3.10.580.10 130 257 7.1E-21 T 11-10-2018 AL543_17575 20ec37c694d76ad2e7bfddd18214247f 451 SMART SM00116 205 252 4.1E-5 T 11-10-2018 IPR000644 CBS domain AL543_17575 20ec37c694d76ad2e7bfddd18214247f 451 Gene3D G3DSA:1.10.357.20 270 447 6.6E-53 T 11-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain AL543_01695 57fad12ec6d99e9caefafc0698c39bb3 298 Pfam PF00892 EamA-like transporter family 10 144 8.9E-8 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL543_01695 57fad12ec6d99e9caefafc0698c39bb3 298 Pfam PF00892 EamA-like transporter family 156 284 1.8E-12 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL543_01695 57fad12ec6d99e9caefafc0698c39bb3 298 SUPERFAMILY SSF103481 189 288 5.62E-11 T 11-10-2018 AL543_01695 57fad12ec6d99e9caefafc0698c39bb3 298 SUPERFAMILY SSF103481 47 145 2.88E-8 T 11-10-2018 AL543_10335 fc3b7cbceb6c11cd5deaa0ff8f994bd4 326 Pfam PF00535 Glycosyl transferase family 2 21 140 1.1E-28 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AL543_10335 fc3b7cbceb6c11cd5deaa0ff8f994bd4 326 Gene3D G3DSA:3.90.550.10 15 218 4.5E-47 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL543_10335 fc3b7cbceb6c11cd5deaa0ff8f994bd4 326 SUPERFAMILY SSF53448 18 239 1.92E-47 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL543_12925 d455a87e8d3ace165c0aa87f5131f7eb 110 Pfam PF02699 Preprotein translocase subunit 22 99 8.3E-27 T 11-10-2018 IPR003849 Preprotein translocase YajC AL543_12925 d455a87e8d3ace165c0aa87f5131f7eb 110 SMART SM01323 18 102 2.0E-38 T 11-10-2018 IPR003849 Preprotein translocase YajC AL543_12925 d455a87e8d3ace165c0aa87f5131f7eb 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 58 76 3.3E-16 T 11-10-2018 IPR003849 Preprotein translocase YajC AL543_12925 d455a87e8d3ace165c0aa87f5131f7eb 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 20 40 3.3E-16 T 11-10-2018 IPR003849 Preprotein translocase YajC AL543_12925 d455a87e8d3ace165c0aa87f5131f7eb 110 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 20 102 2.1E-30 T 11-10-2018 IPR003849 Preprotein translocase YajC AL543_09995 30b6ed3ecd518ead82dc9807a4dc9f68 584 Gene3D G3DSA:3.40.50.720 321 583 1.8E-24 T 11-10-2018 AL543_09995 30b6ed3ecd518ead82dc9807a4dc9f68 584 SUPERFAMILY SSF69572 341 583 1.57E-20 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 AL543_09995 30b6ed3ecd518ead82dc9807a4dc9f68 584 Pfam PF14461 Prokaryotic E2 family B 12 152 1.9E-38 T 11-10-2018 IPR032701 Prokaryotic E2 family B AL543_09995 30b6ed3ecd518ead82dc9807a4dc9f68 584 Pfam PF00899 ThiF family 339 555 1.1E-18 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AL543_18485 eb6d9562b1efaaa4f328182492903f01 644 Pfam PF08298 PrkA AAA domain 20 380 1.8E-173 T 11-10-2018 IPR013153 PrkA AAA domain AL543_18485 eb6d9562b1efaaa4f328182492903f01 644 SMART SM00763 19 380 1.5E-215 T 11-10-2018 IPR013153 PrkA AAA domain AL543_18485 eb6d9562b1efaaa4f328182492903f01 644 Pfam PF06798 PrkA serine protein kinase C-terminal domain 383 636 1.3E-72 T 11-10-2018 IPR010650 PrkA C-terminal domain AL543_18485 eb6d9562b1efaaa4f328182492903f01 644 SUPERFAMILY SSF52540 71 368 3.61E-18 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_18485 eb6d9562b1efaaa4f328182492903f01 644 PIRSF PIRSF000549 1 644 1.5E-285 T 11-10-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 AL543_09490 37d4892352d757266d71033179e1635e 270 PRINTS PR00123 ATP synthase A subunit signature 200 222 5.0E-13 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL543_09490 37d4892352d757266d71033179e1635e 270 PRINTS PR00123 ATP synthase A subunit signature 101 117 5.0E-13 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL543_09490 37d4892352d757266d71033179e1635e 270 PRINTS PR00123 ATP synthase A subunit signature 248 263 5.0E-13 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL543_09490 37d4892352d757266d71033179e1635e 270 SUPERFAMILY SSF81336 93 262 1.15E-49 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL543_09490 37d4892352d757266d71033179e1635e 270 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 35 263 9.1E-45 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL543_09490 37d4892352d757266d71033179e1635e 270 ProSitePatterns PS00449 ATP synthase a subunit signature. 203 212 - T 11-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL543_09490 37d4892352d757266d71033179e1635e 270 Pfam PF00119 ATP synthase A chain 44 262 1.7E-58 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL543_09490 37d4892352d757266d71033179e1635e 270 Gene3D G3DSA:1.20.120.220 92 268 4.7E-66 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL543_09490 37d4892352d757266d71033179e1635e 270 Hamap MF_01393 ATP synthase subunit a [atpB]. 14 268 15.353 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL543_20440 de405d9f183e83a00867a56b832bc03a 192 Pfam PF01713 Smr domain 94 174 1.9E-20 T 11-10-2018 IPR002625 Smr domain AL543_20440 de405d9f183e83a00867a56b832bc03a 192 SMART SM00463 91 174 2.6E-10 T 11-10-2018 IPR002625 Smr domain AL543_20440 de405d9f183e83a00867a56b832bc03a 192 SUPERFAMILY SSF160443 92 174 1.31E-14 T 11-10-2018 IPR036063 Smr domain superfamily AL543_20440 de405d9f183e83a00867a56b832bc03a 192 Gene3D G3DSA:3.30.1370.110 47 180 1.6E-42 T 11-10-2018 AL543_14950 3eaeb1965b078fcbaa15f4ec3ee5abc7 434 Pfam PF00294 pfkB family carbohydrate kinase 77 292 8.4E-11 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB AL543_14950 3eaeb1965b078fcbaa15f4ec3ee5abc7 434 SUPERFAMILY SSF53613 31 417 2.65E-44 T 11-10-2018 IPR029056 Ribokinase-like AL543_18755 c7915103c1149fa743a093fc91f96f0f 228 Gene3D G3DSA:3.40.50.300 4 191 1.0E-19 T 11-10-2018 AL543_18755 c7915103c1149fa743a093fc91f96f0f 228 SUPERFAMILY SSF52540 22 199 1.98E-14 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_14360 bba6ae7aa4a4935af8a567ca7cc6a6e9 182 SUPERFAMILY SSF55469 1 181 1.57E-41 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AL543_14360 bba6ae7aa4a4935af8a567ca7cc6a6e9 182 PIRSF PIRSF000232 1 182 5.5E-62 T 11-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like AL543_14360 bba6ae7aa4a4935af8a567ca7cc6a6e9 182 Gene3D G3DSA:3.40.109.10 1 182 6.9E-43 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AL543_14360 bba6ae7aa4a4935af8a567ca7cc6a6e9 182 Pfam PF00881 Nitroreductase family 8 161 2.7E-24 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AL543_17465 48bbfeb0794e5f9989f7026c52861b41 648 SUPERFAMILY SSF69318 192 607 3.4E-8 T 11-10-2018 AL543_17465 48bbfeb0794e5f9989f7026c52861b41 648 Pfam PF14312 FG-GAP repeat 360 426 2.3E-7 T 11-10-2018 IPR013517 FG-GAP repeat Reactome: R-HSA-216083 AL543_17465 48bbfeb0794e5f9989f7026c52861b41 648 Pfam PF14312 FG-GAP repeat 286 352 8.5E-10 T 11-10-2018 IPR013517 FG-GAP repeat Reactome: R-HSA-216083 AL543_17465 48bbfeb0794e5f9989f7026c52861b41 648 Pfam PF14312 FG-GAP repeat 212 278 2.2E-6 T 11-10-2018 IPR013517 FG-GAP repeat Reactome: R-HSA-216083 AL543_17465 48bbfeb0794e5f9989f7026c52861b41 648 Pfam PF14312 FG-GAP repeat 582 647 2.4E-7 T 11-10-2018 IPR013517 FG-GAP repeat Reactome: R-HSA-216083 AL543_17465 48bbfeb0794e5f9989f7026c52861b41 648 Pfam PF14312 FG-GAP repeat 146 204 3.7E-6 T 11-10-2018 IPR013517 FG-GAP repeat Reactome: R-HSA-216083 AL543_17465 48bbfeb0794e5f9989f7026c52861b41 648 Pfam PF14312 FG-GAP repeat 434 500 3.9E-5 T 11-10-2018 IPR013517 FG-GAP repeat Reactome: R-HSA-216083 AL543_17465 48bbfeb0794e5f9989f7026c52861b41 648 SMART SM00191 299 365 0.8 T 11-10-2018 IPR013519 Integrin alpha beta-propellor Reactome: R-HSA-216083 AL543_17465 48bbfeb0794e5f9989f7026c52861b41 648 SMART SM00191 225 293 7.1 T 11-10-2018 IPR013519 Integrin alpha beta-propellor Reactome: R-HSA-216083 AL543_17465 48bbfeb0794e5f9989f7026c52861b41 648 SMART SM00191 373 441 3.8 T 11-10-2018 IPR013519 Integrin alpha beta-propellor Reactome: R-HSA-216083 AL543_17465 48bbfeb0794e5f9989f7026c52861b41 648 SMART SM00191 151 217 8.1 T 11-10-2018 IPR013519 Integrin alpha beta-propellor Reactome: R-HSA-216083 AL543_17465 48bbfeb0794e5f9989f7026c52861b41 648 SMART SM00191 447 515 48.0 T 11-10-2018 IPR013519 Integrin alpha beta-propellor Reactome: R-HSA-216083 AL543_17465 48bbfeb0794e5f9989f7026c52861b41 648 SMART SM00191 521 589 3.7 T 11-10-2018 IPR013519 Integrin alpha beta-propellor Reactome: R-HSA-216083 AL543_17465 48bbfeb0794e5f9989f7026c52861b41 648 Gene3D G3DSA:2.130.10.130 259 401 1.7E-6 T 11-10-2018 IPR028994 Integrin alpha, N-terminal Reactome: R-HSA-216083 AL543_00620 ea44e3f78842fc62654b84c967960860 296 Gene3D G3DSA:1.10.3720.10 1 283 9.3E-74 T 11-10-2018 IPR035906 MetI-like superfamily AL543_00620 ea44e3f78842fc62654b84c967960860 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 286 1.3E-18 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL543_00620 ea44e3f78842fc62654b84c967960860 296 SUPERFAMILY SSF161098 10 296 1.57E-68 T 11-10-2018 IPR035906 MetI-like superfamily AL543_17610 a5c3573b40963997cbd9e41501f2f5c6 89 Pfam PF06945 Protein of unknown function (DUF1289) 11 56 2.4E-19 T 11-10-2018 IPR010710 Protein of unknown function DUF1289 AL543_19950 15fae15ef1c78e0c4ed3431540b62330 270 Pfam PF02108 Flagellar assembly protein FliH 129 255 5.2E-34 T 11-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE AL543_19950 15fae15ef1c78e0c4ed3431540b62330 270 PRINTS PR01003 Flagellar assembly protein FliH signature 131 150 1.8E-9 T 11-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AL543_19950 15fae15ef1c78e0c4ed3431540b62330 270 PRINTS PR01003 Flagellar assembly protein FliH signature 151 168 1.8E-9 T 11-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AL543_19950 15fae15ef1c78e0c4ed3431540b62330 270 PRINTS PR01003 Flagellar assembly protein FliH signature 89 111 1.8E-9 T 11-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AL543_19950 15fae15ef1c78e0c4ed3431540b62330 270 PRINTS PR01003 Flagellar assembly protein FliH signature 221 237 1.8E-9 T 11-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AL543_19950 15fae15ef1c78e0c4ed3431540b62330 270 PRINTS PR01003 Flagellar assembly protein FliH signature 112 130 1.8E-9 T 11-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AL543_01665 9e3658b00d3ddc16da6712f459b60e18 392 Gene3D G3DSA:1.20.1250.20 2 385 1.1E-19 T 11-10-2018 AL543_01665 9e3658b00d3ddc16da6712f459b60e18 392 SUPERFAMILY SSF103473 5 383 8.5E-29 T 11-10-2018 IPR036259 MFS transporter superfamily AL543_13755 fff60865554d377b4ceb11ca25bf2a66 469 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 316 454 4.9E-8 T 11-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain AL543_13755 fff60865554d377b4ceb11ca25bf2a66 469 Pfam PF13440 Polysaccharide biosynthesis protein 27 310 3.8E-23 T 11-10-2018 AL543_16505 e947690d480f813a4d9d776006116004 212 Pfam PF01810 LysE type translocator 15 208 3.3E-32 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL543_16505 e947690d480f813a4d9d776006116004 212 PIRSF PIRSF006324 1 210 1.6E-53 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL543_11330 d5ba2c26964fd0d23c804695258c3efe 127 Pfam PF09834 Predicted membrane protein (DUF2061) 1 52 4.3E-22 T 11-10-2018 IPR018638 Domain of unknown function DUF2061, membrane AL543_11330 d5ba2c26964fd0d23c804695258c3efe 127 Pfam PF09834 Predicted membrane protein (DUF2061) 66 116 9.1E-22 T 11-10-2018 IPR018638 Domain of unknown function DUF2061, membrane AL543_07925 67897b72736613d23a247967d6cbc228 289 PRINTS PR00478 Phosphoribulokinase family signature 12 29 1.2E-26 T 11-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AL543_07925 67897b72736613d23a247967d6cbc228 289 PRINTS PR00478 Phosphoribulokinase family signature 126 144 1.2E-26 T 11-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AL543_07925 67897b72736613d23a247967d6cbc228 289 PRINTS PR00478 Phosphoribulokinase family signature 164 181 1.2E-26 T 11-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AL543_07925 67897b72736613d23a247967d6cbc228 289 PRINTS PR00478 Phosphoribulokinase family signature 182 205 1.2E-26 T 11-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AL543_07925 67897b72736613d23a247967d6cbc228 289 Gene3D G3DSA:3.40.50.300 1 289 1.6E-112 T 11-10-2018 AL543_07925 67897b72736613d23a247967d6cbc228 289 SUPERFAMILY SSF52540 4 286 4.11E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_07925 67897b72736613d23a247967d6cbc228 289 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 1.0E-69 T 11-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 AL543_00725 b1266f707a6baaaaa21d1288a9a3b612 307 SUPERFAMILY SSF103481 43 139 2.22E-12 T 11-10-2018 AL543_00725 b1266f707a6baaaaa21d1288a9a3b612 307 SUPERFAMILY SSF103481 182 290 7.06E-5 T 11-10-2018 AL543_00725 b1266f707a6baaaaa21d1288a9a3b612 307 Pfam PF00892 EamA-like transporter family 6 136 8.7E-15 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL543_18630 c81a92c7f65aeba2a426106fcbf37b38 383 Pfam PF09002 Domain of unknown function (DUF1887) 1 379 4.3E-162 T 11-10-2018 IPR015093 Protein of unknown function DUF1887 AL543_18630 c81a92c7f65aeba2a426106fcbf37b38 383 Gene3D G3DSA:3.40.1350.10 251 376 8.1E-78 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 AL543_18630 c81a92c7f65aeba2a426106fcbf37b38 383 SUPERFAMILY SSF52980 1 382 6.84E-120 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AL543_18630 c81a92c7f65aeba2a426106fcbf37b38 383 Gene3D G3DSA:3.40.50.10770 1 140 1.1E-61 T 11-10-2018 AL543_18630 c81a92c7f65aeba2a426106fcbf37b38 383 Gene3D G3DSA:1.10.10.680 169 250 8.1E-78 T 11-10-2018 AL543_11920 e0174876b3bc8ce549e04e0e1d95677a 524 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 524 225.907 T 11-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AL543_11920 e0174876b3bc8ce549e04e0e1d95677a 524 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 7 515 2.0E-216 T 11-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AL543_11920 e0174876b3bc8ce549e04e0e1d95677a 524 Pfam PF04262 Glutamate-cysteine ligase 14 378 2.5E-168 T 11-10-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AL543_11920 e0174876b3bc8ce549e04e0e1d95677a 524 SUPERFAMILY SSF55931 9 513 3.53E-203 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AL543_11920 e0174876b3bc8ce549e04e0e1d95677a 524 Gene3D G3DSA:3.30.590.20 17 524 6.2E-197 T 11-10-2018 AL543_01295 e4fe8a65edf27f9202ab54cc54b8a3dd 669 Gene3D G3DSA:3.40.50.12320 173 331 4.4E-48 T 11-10-2018 AL543_01295 e4fe8a65edf27f9202ab54cc54b8a3dd 669 Gene3D G3DSA:3.40.50.11040 3 118 2.0E-16 T 11-10-2018 AL543_01295 e4fe8a65edf27f9202ab54cc54b8a3dd 669 Pfam PF05127 Helicase 175 341 3.1E-58 T 11-10-2018 IPR007807 Helicase domain Reactome: R-HSA-6790901 AL543_01295 e4fe8a65edf27f9202ab54cc54b8a3dd 669 SUPERFAMILY SSF55729 369 536 1.15E-11 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL543_01295 e4fe8a65edf27f9202ab54cc54b8a3dd 669 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 19 666 43.44 T 11-10-2018 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 AL543_01295 e4fe8a65edf27f9202ab54cc54b8a3dd 669 SUPERFAMILY SSF52540 153 284 3.2E-11 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_01295 e4fe8a65edf27f9202ab54cc54b8a3dd 669 Pfam PF13718 GNAT acetyltransferase 2 375 489 1.3E-18 T 11-10-2018 IPR000182 GNAT domain AL543_01295 e4fe8a65edf27f9202ab54cc54b8a3dd 669 Gene3D G3DSA:3.40.630.30 335 536 1.1E-65 T 11-10-2018 AL543_15830 c603ea4f2a90e37e3a14a6378e8c01cc 280 Gene3D G3DSA:3.40.1190.20 1 280 3.7E-102 T 11-10-2018 IPR029056 Ribokinase-like AL543_15830 c603ea4f2a90e37e3a14a6378e8c01cc 280 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 12 269 1.3E-98 T 11-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL543_15830 c603ea4f2a90e37e3a14a6378e8c01cc 280 SUPERFAMILY SSF53613 8 271 9.82E-81 T 11-10-2018 IPR029056 Ribokinase-like AL543_15830 c603ea4f2a90e37e3a14a6378e8c01cc 280 Pfam PF08543 Phosphomethylpyrimidine kinase 19 267 1.5E-93 T 11-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 AL543_03075 6235c79ff3fde9d878fce5a719f23fdb 160 PIRSF PIRSF003174 2 157 8.9E-50 T 11-10-2018 IPR010292 Uncharacterised protein family CreA AL543_03075 6235c79ff3fde9d878fce5a719f23fdb 160 Pfam PF05981 CreA protein 25 147 2.9E-44 T 11-10-2018 IPR010292 Uncharacterised protein family CreA AL543_08410 fbbfbfb4e428dbb300637f531c2a40d4 359 Gene3D G3DSA:3.40.50.2300 166 336 9.3E-44 T 11-10-2018 AL543_08410 fbbfbfb4e428dbb300637f531c2a40d4 359 Pfam PF13407 Periplasmic binding protein domain 64 313 5.9E-30 T 11-10-2018 IPR025997 Periplasmic binding protein AL543_08410 fbbfbfb4e428dbb300637f531c2a40d4 359 SUPERFAMILY SSF53822 61 337 2.23E-42 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AL543_08410 fbbfbfb4e428dbb300637f531c2a40d4 359 Gene3D G3DSA:3.40.50.2300 69 328 9.3E-44 T 11-10-2018 AL543_15925 380f9d2c160b39a89e477c617beacd83 487 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 52 479 1.1E-75 T 11-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AL543_15925 380f9d2c160b39a89e477c617beacd83 487 PIRSF PIRSF002457 4 487 3.5E-110 T 11-10-2018 IPR030676 Citrate carrier CitT-related AL543_15925 380f9d2c160b39a89e477c617beacd83 487 Pfam PF00939 Sodium:sulfate symporter transmembrane region 22 479 1.1E-47 T 11-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AL543_16960 fa0727d87a608658336d37e005928f83 288 PIRSF PIRSF006221 1 288 6.2E-107 T 11-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 AL543_16960 fa0727d87a608658336d37e005928f83 288 Gene3D G3DSA:3.90.1200.10 97 288 2.3E-62 T 11-10-2018 AL543_16960 fa0727d87a608658336d37e005928f83 288 Gene3D G3DSA:3.30.200.20 1 93 3.9E-23 T 11-10-2018 AL543_16960 fa0727d87a608658336d37e005928f83 288 Pfam PF03881 Fructosamine kinase 1 287 2.5E-121 T 11-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 AL543_16960 fa0727d87a608658336d37e005928f83 288 SUPERFAMILY SSF56112 8 281 2.16E-38 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AL543_19915 803d17b048cce726649afbf0035ca53a 129 Pfam PF04347 Flagellar biosynthesis protein, FliO 43 121 8.9E-20 T 11-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 AL543_19915 803d17b048cce726649afbf0035ca53a 129 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 31 98 2.6E-23 T 11-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 AL543_12760 8fde6b101c4f1698a582c1ba77689454 118 Pfam PF11804 Protein of unknown function (DUF3325) 8 108 6.0E-7 T 11-10-2018 IPR021762 Protein of unknown function DUF3325 AL543_10765 300be067cbfd38a7f28b07a6d0317ac7 353 Gene3D G3DSA:2.40.50.140 35 101 4.3E-23 T 11-10-2018 AL543_10765 300be067cbfd38a7f28b07a6d0317ac7 353 Gene3D G3DSA:1.10.40.50 276 350 1.6E-25 T 11-10-2018 AL543_10765 300be067cbfd38a7f28b07a6d0317ac7 353 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 74 334 4.2E-87 T 11-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 AL543_10765 300be067cbfd38a7f28b07a6d0317ac7 353 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 40 340 36.902 T 11-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 AL543_10765 300be067cbfd38a7f28b07a6d0317ac7 353 SUPERFAMILY SSF52540 113 338 1.28E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_10765 300be067cbfd38a7f28b07a6d0317ac7 353 Pfam PF03193 RsgA GTPase 99 276 2.6E-56 T 11-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 AL543_10765 300be067cbfd38a7f28b07a6d0317ac7 353 Gene3D G3DSA:3.40.50.300 102 275 1.3E-49 T 11-10-2018 AL543_05790 8403785b25df3a3466ca9ef81045888b 309 SUPERFAMILY SSF53613 1 302 1.42E-70 T 11-10-2018 IPR029056 Ribokinase-like AL543_05790 8403785b25df3a3466ca9ef81045888b 309 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 257 270 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AL543_05790 8403785b25df3a3466ca9ef81045888b 309 Gene3D G3DSA:3.40.1190.20 1 307 2.3E-77 T 11-10-2018 IPR029056 Ribokinase-like AL543_05790 8403785b25df3a3466ca9ef81045888b 309 Pfam PF00294 pfkB family carbohydrate kinase 3 302 2.3E-58 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB AL543_07880 ec8d55a6b72b66999c4b110e855f4083 326 SUPERFAMILY SSF56235 5 322 4.3E-98 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL543_07880 ec8d55a6b72b66999c4b110e855f4083 326 Pfam PF01112 Asparaginase 6 323 1.5E-110 T 11-10-2018 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 AL543_07880 ec8d55a6b72b66999c4b110e855f4083 326 Gene3D G3DSA:3.60.20.30 191 326 1.4E-48 T 11-10-2018 AL543_03525 e7068b50338a9970a0aa72a40c9e13ec 459 Gene3D G3DSA:1.20.1250.20 21 219 1.5E-38 T 11-10-2018 AL543_03525 e7068b50338a9970a0aa72a40c9e13ec 459 Gene3D G3DSA:1.20.1250.20 242 443 1.5E-34 T 11-10-2018 AL543_03525 e7068b50338a9970a0aa72a40c9e13ec 459 PIRSF PIRSF002808 9 451 4.3E-104 T 11-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 AL543_03525 e7068b50338a9970a0aa72a40c9e13ec 459 SUPERFAMILY SSF103473 19 441 3.53E-64 T 11-10-2018 IPR036259 MFS transporter superfamily AL543_03525 e7068b50338a9970a0aa72a40c9e13ec 459 Pfam PF07690 Major Facilitator Superfamily 36 392 2.9E-43 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL543_10355 94bfc07947c97648c4e4c057a88d35a7 354 Pfam PF00953 Glycosyl transferase family 4 73 231 4.5E-30 T 11-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 AL543_10355 94bfc07947c97648c4e4c057a88d35a7 354 Hamap MF_02030 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [wecA]. 7 351 27.108 T 11-10-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819|MetaCyc: PWY-7905 AL543_10355 94bfc07947c97648c4e4c057a88d35a7 354 TIGRFAM TIGR02380 ECA_wecA: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 6 347 1.4E-151 T 11-10-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819|MetaCyc: PWY-7905 AL543_08355 fb21b9ddb919fc0ac8902c369cc180a5 223 Hamap MF_02088 Probable queuosine precursor transporter. 7 214 15.626 T 11-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 AL543_08355 fb21b9ddb919fc0ac8902c369cc180a5 223 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 15 204 1.9E-62 T 11-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 AL543_08355 fb21b9ddb919fc0ac8902c369cc180a5 223 Pfam PF02592 Putative vitamin uptake transporter 43 199 5.8E-38 T 11-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 AL543_15985 4976febbeb60875e5bde9e0abbd9e0c1 324 SUPERFAMILY SSF53822 23 323 2.17E-77 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AL543_15985 4976febbeb60875e5bde9e0abbd9e0c1 324 Pfam PF13407 Periplasmic binding protein domain 26 296 1.3E-59 T 11-10-2018 IPR025997 Periplasmic binding protein AL543_15985 4976febbeb60875e5bde9e0abbd9e0c1 324 Gene3D G3DSA:3.40.50.2300 26 299 4.1E-114 T 11-10-2018 AL543_15985 4976febbeb60875e5bde9e0abbd9e0c1 324 Gene3D G3DSA:3.40.50.2300 132 276 4.1E-114 T 11-10-2018 AL543_10365 51e67ec601f622a0d8f165fd50a342e3 412 Pfam PF00924 Mechanosensitive ion channel 144 397 2.8E-52 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AL543_10365 51e67ec601f622a0d8f165fd50a342e3 412 SUPERFAMILY SSF50182 187 252 1.9E-10 T 11-10-2018 IPR010920 LSM domain superfamily AL543_10365 51e67ec601f622a0d8f165fd50a342e3 412 SUPERFAMILY SSF82689 326 394 1.1E-5 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AL543_01305 33c2bcfb3da6fb92a38894e3e6ab79c5 323 Pfam PF02195 ParB-like nuclease domain 73 145 1.1E-8 T 11-10-2018 IPR003115 ParB/Sulfiredoxin AL543_01305 33c2bcfb3da6fb92a38894e3e6ab79c5 323 SMART SM00470 58 149 6.5E-7 T 11-10-2018 IPR003115 ParB/Sulfiredoxin AL543_01305 33c2bcfb3da6fb92a38894e3e6ab79c5 323 Gene3D G3DSA:1.10.10.2830 153 270 7.4E-16 T 11-10-2018 AL543_01305 33c2bcfb3da6fb92a38894e3e6ab79c5 323 SUPERFAMILY SSF110849 75 150 1.07E-8 T 11-10-2018 IPR036086 ParB/Sulfiredoxin superfamily AL543_01305 33c2bcfb3da6fb92a38894e3e6ab79c5 323 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 67 232 4.6E-23 T 11-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 AL543_21375 b809261f62e03094353d4a55041fbcdf 42 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 6.6E-16 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL543_03600 1542c96f549294a4f4892cd662ccba42 447 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 16 425 6.1E-111 T 11-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 AL543_03600 1542c96f549294a4f4892cd662ccba42 447 PIRSF PIRSF006351 4 435 1.6E-127 T 11-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 AL543_03600 1542c96f549294a4f4892cd662ccba42 447 Pfam PF02378 Phosphotransferase system, EIIC 32 352 9.0E-47 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL543_09740 dc5f2aaca2c4f05e4ddc6035024e1ee0 426 SUPERFAMILY SSF48013 1 146 2.75E-35 T 11-10-2018 IPR035926 NusB-like superfamily AL543_09740 dc5f2aaca2c4f05e4ddc6035024e1ee0 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 364 380 3.9E-31 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AL543_09740 dc5f2aaca2c4f05e4ddc6035024e1ee0 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 219 233 3.9E-31 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AL543_09740 dc5f2aaca2c4f05e4ddc6035024e1ee0 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 407 424 3.9E-31 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AL543_09740 dc5f2aaca2c4f05e4ddc6035024e1ee0 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 314 326 3.9E-31 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AL543_09740 dc5f2aaca2c4f05e4ddc6035024e1ee0 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 248 258 3.9E-31 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AL543_09740 dc5f2aaca2c4f05e4ddc6035024e1ee0 426 Pfam PF01029 NusB family 1 123 4.7E-24 T 11-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AL543_09740 dc5f2aaca2c4f05e4ddc6035024e1ee0 426 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 313 324 - T 11-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 AL543_09740 dc5f2aaca2c4f05e4ddc6035024e1ee0 426 Gene3D G3DSA:3.30.70.1170 170 227 8.9E-27 T 11-10-2018 AL543_09740 dc5f2aaca2c4f05e4ddc6035024e1ee0 426 Gene3D G3DSA:1.10.940.10 1 142 1.5E-44 T 11-10-2018 IPR035926 NusB-like superfamily AL543_09740 dc5f2aaca2c4f05e4ddc6035024e1ee0 426 SUPERFAMILY SSF53335 138 424 1.4E-79 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL543_09740 dc5f2aaca2c4f05e4ddc6035024e1ee0 426 Gene3D G3DSA:1.10.287.730 143 169 1.4E-11 T 11-10-2018 AL543_09740 dc5f2aaca2c4f05e4ddc6035024e1ee0 426 Gene3D G3DSA:3.40.50.150 228 425 1.6E-71 T 11-10-2018 AL543_09740 dc5f2aaca2c4f05e4ddc6035024e1ee0 426 Pfam PF01189 16S rRNA methyltransferase RsmB/F 237 422 3.3E-69 T 11-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 AL543_09740 dc5f2aaca2c4f05e4ddc6035024e1ee0 426 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 4 425 4.1E-154 T 11-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 AL543_18810 3dd51414e46c4d72f8d89d226fad02b3 366 SUPERFAMILY SSF53756 11 359 1.61E-67 T 11-10-2018 AL543_18810 3dd51414e46c4d72f8d89d226fad02b3 366 Pfam PF13439 Glycosyltransferase Family 4 21 179 4.8E-14 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AL543_18810 3dd51414e46c4d72f8d89d226fad02b3 366 Gene3D G3DSA:3.40.50.2000 175 348 2.2E-58 T 11-10-2018 AL543_18810 3dd51414e46c4d72f8d89d226fad02b3 366 Gene3D G3DSA:3.40.50.2000 36 359 2.2E-58 T 11-10-2018 AL543_18810 3dd51414e46c4d72f8d89d226fad02b3 366 Pfam PF00534 Glycosyl transferases group 1 187 335 3.4E-35 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AL543_17985 bc9dfa5db3ec8d5c57350c67ae3a0e04 760 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 301 447 5.1E-8 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL543_17985 bc9dfa5db3ec8d5c57350c67ae3a0e04 760 SUPERFAMILY SSF47203 301 453 6.28E-20 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AL543_17985 bc9dfa5db3ec8d5c57350c67ae3a0e04 760 Gene3D G3DSA:1.10.540.10 63 176 8.1E-89 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AL543_17985 bc9dfa5db3ec8d5c57350c67ae3a0e04 760 Pfam PF09317 Domain of unknown function (DUF1974) 455 739 3.9E-111 T 11-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 AL543_17985 bc9dfa5db3ec8d5c57350c67ae3a0e04 760 Gene3D G3DSA:2.40.110.10 177 300 8.1E-89 T 11-10-2018 AL543_17985 bc9dfa5db3ec8d5c57350c67ae3a0e04 760 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 67 173 3.3E-14 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL543_17985 bc9dfa5db3ec8d5c57350c67ae3a0e04 760 SUPERFAMILY SSF56645 61 296 1.57E-45 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AL543_17985 bc9dfa5db3ec8d5c57350c67ae3a0e04 760 Gene3D G3DSA:1.20.140.10 301 446 8.1E-89 T 11-10-2018 AL543_17985 bc9dfa5db3ec8d5c57350c67ae3a0e04 760 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 178 277 1.8E-9 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AL543_14235 a76665f952abc14832ccf9171aaeacee 296 Gene3D G3DSA:3.40.50.12300 4 296 2.5E-78 T 11-10-2018 IPR038136 Gluconeogenesis factor superfamily AL543_14235 a76665f952abc14832ccf9171aaeacee 296 Hamap MF_00973 Gluconeogenesis factor. 5 296 30.999 T 11-10-2018 IPR010119 Gluconeogenesis factor AL543_14235 a76665f952abc14832ccf9171aaeacee 296 Pfam PF01933 Uncharacterised protein family UPF0052 9 287 6.4E-75 T 11-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 AL543_14235 a76665f952abc14832ccf9171aaeacee 296 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 9 292 5.6E-107 T 11-10-2018 IPR010119 Gluconeogenesis factor AL543_14235 a76665f952abc14832ccf9171aaeacee 296 SUPERFAMILY SSF142338 6 291 6.67E-85 T 11-10-2018 AL543_05620 5583f67258fd2b3f7531da9d69438ac6 370 SUPERFAMILY SSF103642 4 23 5.56E-7 T 11-10-2018 AL543_05620 5583f67258fd2b3f7531da9d69438ac6 370 Gene3D G3DSA:3.10.450.50 1 23 2.5E-5 T 11-10-2018 AL543_05620 5583f67258fd2b3f7531da9d69438ac6 370 Pfam PF02810 SEC-C motif 5 21 1.4E-8 T 11-10-2018 IPR004027 SEC-C motif AL543_05545 5583f67258fd2b3f7531da9d69438ac6 370 SUPERFAMILY SSF103642 4 23 5.56E-7 T 11-10-2018 AL543_05545 5583f67258fd2b3f7531da9d69438ac6 370 Gene3D G3DSA:3.10.450.50 1 23 2.5E-5 T 11-10-2018 AL543_05545 5583f67258fd2b3f7531da9d69438ac6 370 Pfam PF02810 SEC-C motif 5 21 1.4E-8 T 11-10-2018 IPR004027 SEC-C motif AL543_09010 f11a7051f56b5f99640d2ff1fa90af97 106 Gene3D G3DSA:3.40.250.10 1 101 1.2E-25 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AL543_09010 f11a7051f56b5f99640d2ff1fa90af97 106 Pfam PF00581 Rhodanese-like domain 10 98 1.9E-13 T 11-10-2018 IPR001763 Rhodanese-like domain AL543_09010 f11a7051f56b5f99640d2ff1fa90af97 106 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 105 31.765 T 11-10-2018 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927 AL543_09010 f11a7051f56b5f99640d2ff1fa90af97 106 SMART SM00450 7 102 4.0E-18 T 11-10-2018 IPR001763 Rhodanese-like domain AL543_09010 f11a7051f56b5f99640d2ff1fa90af97 106 SUPERFAMILY SSF52821 1 104 4.32E-28 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AL543_12110 1790ea0905e05fabcc1d8a953e8a007e 258 Gene3D G3DSA:3.40.1350.60 95 252 4.5E-54 T 11-10-2018 AL543_12110 1790ea0905e05fabcc1d8a953e8a007e 258 Pfam PF03749 Sugar fermentation stimulation protein 27 245 7.7E-77 T 11-10-2018 IPR005224 Sugar fermentation stimulation protein AL543_12110 1790ea0905e05fabcc1d8a953e8a007e 258 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 15 243 5.9E-77 T 11-10-2018 IPR005224 Sugar fermentation stimulation protein AL543_12110 1790ea0905e05fabcc1d8a953e8a007e 258 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 15 253 57.303 T 11-10-2018 IPR005224 Sugar fermentation stimulation protein AL543_12110 1790ea0905e05fabcc1d8a953e8a007e 258 Gene3D G3DSA:2.40.50.580 15 94 2.1E-32 T 11-10-2018 AL543_15705 973a30c5826d613816524c67933756be 218 SUPERFAMILY SSF56281 4 211 8.53E-57 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AL543_15705 973a30c5826d613816524c67933756be 218 Pfam PF00753 Metallo-beta-lactamase superfamily 12 195 3.9E-30 T 11-10-2018 IPR001279 Metallo-beta-lactamase AL543_15705 973a30c5826d613816524c67933756be 218 SMART SM00849 14 195 2.1E-40 T 11-10-2018 IPR001279 Metallo-beta-lactamase AL543_15705 973a30c5826d613816524c67933756be 218 Gene3D G3DSA:3.60.15.10 3 213 1.9E-77 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AL543_10285 bf3f0c1b937dd962dc5c76015da9fdd8 404 Pfam PF04932 O-Antigen ligase 184 329 4.4E-19 T 11-10-2018 IPR007016 O-antigen ligase-related AL543_16500 1c6689c4bc758500c26ebac1c6739ebd 244 Pfam PF11153 Protein of unknown function (DUF2931) 4 228 1.4E-50 T 11-10-2018 IPR021326 Protein of unknown function DUF2931 AL543_08955 1adf03ad7f9b7e83b79795d695199807 163 Pfam PF10675 Protein of unknown function (DUF2489) 15 147 2.3E-45 T 11-10-2018 IPR019617 Domain of unknown function DUF2489 AL543_04925 05c257933feaecb85c586912adaf33bb 283 SUPERFAMILY SSF54506 3 279 3.84E-38 T 11-10-2018 AL543_04925 05c257933feaecb85c586912adaf33bb 283 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 4 278 2.7E-40 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AL543_04925 05c257933feaecb85c586912adaf33bb 283 Gene3D G3DSA:3.10.310.10 5 272 3.7E-71 T 11-10-2018 AL543_04925 05c257933feaecb85c586912adaf33bb 283 PIRSF PIRSF016184 1 283 4.9E-59 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AL543_04925 05c257933feaecb85c586912adaf33bb 283 Gene3D G3DSA:3.10.310.10 118 271 3.7E-71 T 11-10-2018 AL543_04925 05c257933feaecb85c586912adaf33bb 283 Pfam PF02567 Phenazine biosynthesis-like protein 6 277 4.6E-35 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AL543_17030 8ad6ac6fbb5991dcfb81fc24320a314b 280 Gene3D G3DSA:1.10.3720.10 3 273 2.4E-49 T 11-10-2018 IPR035906 MetI-like superfamily AL543_17030 8ad6ac6fbb5991dcfb81fc24320a314b 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 275 1.6E-13 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL543_17030 8ad6ac6fbb5991dcfb81fc24320a314b 280 SUPERFAMILY SSF161098 7 277 8.11E-53 T 11-10-2018 IPR035906 MetI-like superfamily AL543_02660 ddab288c2a3ccedf26bbd169debfa162 69 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 35 68 8.3E-8 T 11-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AL543_02660 ddab288c2a3ccedf26bbd169debfa162 69 Gene3D G3DSA:1.20.120.910 2 69 3.0E-14 T 11-10-2018 AL543_13750 989a9f03eba2cee8fce8b0d2ff0e115f 382 Gene3D G3DSA:3.40.50.2000 205 368 7.0E-24 T 11-10-2018 AL543_13750 989a9f03eba2cee8fce8b0d2ff0e115f 382 SUPERFAMILY SSF53756 21 381 1.06E-45 T 11-10-2018 AL543_13750 989a9f03eba2cee8fce8b0d2ff0e115f 382 Pfam PF13439 Glycosyltransferase Family 4 21 189 1.9E-9 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AL543_13750 989a9f03eba2cee8fce8b0d2ff0e115f 382 Pfam PF00534 Glycosyl transferases group 1 195 347 5.4E-20 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AL543_13750 989a9f03eba2cee8fce8b0d2ff0e115f 382 Gene3D G3DSA:3.40.50.2000 3 204 2.5E-13 T 11-10-2018 AL543_10965 a42c0420d7dd4a66a8bba76fdf2158ab 139 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 12 139 2.0E-47 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 AL543_10965 a42c0420d7dd4a66a8bba76fdf2158ab 139 PIRSF PIRSF004681 1 139 2.2E-47 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 AL543_10965 a42c0420d7dd4a66a8bba76fdf2158ab 139 Pfam PF01894 Uncharacterised protein family UPF0047 19 135 8.1E-39 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 AL543_10965 a42c0420d7dd4a66a8bba76fdf2158ab 139 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 100 118 - T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 AL543_10965 a42c0420d7dd4a66a8bba76fdf2158ab 139 SUPERFAMILY SSF111038 1 139 3.4E-51 T 11-10-2018 IPR035917 YjbQ-like superfamily AL543_10965 a42c0420d7dd4a66a8bba76fdf2158ab 139 Gene3D G3DSA:2.60.120.460 2 139 3.7E-43 T 11-10-2018 IPR035917 YjbQ-like superfamily AL543_16705 b6415dfc1be252ab578efca3d63ac57d 566 Pfam PF11949 Protein of unknown function (DUF3466) 268 565 7.0E-63 T 11-10-2018 IPR022562 Protein of unknown function DUF3466 AL543_16705 b6415dfc1be252ab578efca3d63ac57d 566 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 546 565 0.0033 T 11-10-2018 IPR020008 GlyGly-CTERM domain AL543_07640 e9ed58a41b54441d4e53692477b3c816 419 Pfam PF02687 FtsX-like permease family 317 410 6.6E-9 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AL543_07640 e9ed58a41b54441d4e53692477b3c816 419 Pfam PF12704 MacB-like periplasmic core domain 20 207 1.5E-10 T 11-10-2018 IPR025857 MacB-like periplasmic core domain AL543_16925 15c6a085e5f632c37b012ba49077f319 91 Pfam PF11173 Protein of unknown function (DUF2960) 1 75 2.1E-35 T 11-10-2018 IPR021343 Protein of unknown function DUF2960 AL543_19455 5aa069ee0f09b0e9b266b4c9eb8ad68d 288 Pfam PF00520 Ion transport protein 24 235 1.9E-30 T 11-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 AL543_19455 5aa069ee0f09b0e9b266b4c9eb8ad68d 288 PRINTS PR00169 Potassium channel signature 17 45 9.9E-36 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AL543_19455 5aa069ee0f09b0e9b266b4c9eb8ad68d 288 PRINTS PR00169 Potassium channel signature 58 81 9.9E-36 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AL543_19455 5aa069ee0f09b0e9b266b4c9eb8ad68d 288 PRINTS PR00169 Potassium channel signature 120 146 9.9E-36 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AL543_19455 5aa069ee0f09b0e9b266b4c9eb8ad68d 288 PRINTS PR00169 Potassium channel signature 84 104 9.9E-36 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AL543_19455 5aa069ee0f09b0e9b266b4c9eb8ad68d 288 PRINTS PR00169 Potassium channel signature 178 200 9.9E-36 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AL543_19455 5aa069ee0f09b0e9b266b4c9eb8ad68d 288 PRINTS PR00169 Potassium channel signature 149 172 9.9E-36 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AL543_19455 5aa069ee0f09b0e9b266b4c9eb8ad68d 288 PRINTS PR00169 Potassium channel signature 207 233 9.9E-36 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AL543_19455 5aa069ee0f09b0e9b266b4c9eb8ad68d 288 Gene3D G3DSA:1.10.287.70 134 243 1.0E-28 T 11-10-2018 AL543_19455 5aa069ee0f09b0e9b266b4c9eb8ad68d 288 Gene3D G3DSA:1.20.120.350 3 132 7.7E-27 T 11-10-2018 IPR027359 Voltage-dependent channel domain superfamily AL543_19455 5aa069ee0f09b0e9b266b4c9eb8ad68d 288 SUPERFAMILY SSF81324 23 234 5.1E-52 T 11-10-2018 AL543_02370 c0b5f6b76bb828d3130f823f53022f37 238 Gene3D G3DSA:3.30.110.170 43 210 3.3E-10 T 11-10-2018 AL543_02370 c0b5f6b76bb828d3130f823f53022f37 238 Pfam PF04402 Protein of unknown function (DUF541) 41 212 7.6E-15 T 11-10-2018 IPR007497 Protein of unknown function DUF541 AL543_02370 c0b5f6b76bb828d3130f823f53022f37 238 Gene3D G3DSA:3.30.70.2970 53 168 3.3E-10 T 11-10-2018 AL543_02370 c0b5f6b76bb828d3130f823f53022f37 238 PIRSF PIRSF029033 1 238 2.5E-119 T 11-10-2018 IPR016907 Uncharacterised conserved protein UCP029033, periplasmic protein AL543_16165 83cb1b00838a32761c4a18d17f23d38e 310 SUPERFAMILY SSF51735 1 113 4.86E-27 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL543_16165 83cb1b00838a32761c4a18d17f23d38e 310 Pfam PF13241 Putative NAD(P)-binding 6 116 7.1E-31 T 11-10-2018 AL543_16165 83cb1b00838a32761c4a18d17f23d38e 310 Gene3D G3DSA:1.10.8.210 150 211 2.6E-8 T 11-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AL543_16165 83cb1b00838a32761c4a18d17f23d38e 310 SUPERFAMILY SSF75615 115 203 3.01E-22 T 11-10-2018 AL543_16165 83cb1b00838a32761c4a18d17f23d38e 310 Pfam PF10414 Sirohaem synthase dimerisation region 151 205 7.5E-12 T 11-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AL543_16165 83cb1b00838a32761c4a18d17f23d38e 310 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 194 5.1E-59 T 11-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AL543_16165 83cb1b00838a32761c4a18d17f23d38e 310 Gene3D G3DSA:3.40.50.720 1 113 6.2E-36 T 11-10-2018 AL543_16165 83cb1b00838a32761c4a18d17f23d38e 310 SUPERFAMILY SSF53790 224 296 4.65E-5 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 AL543_16165 83cb1b00838a32761c4a18d17f23d38e 310 Gene3D G3DSA:3.30.160.110 114 148 4.4E-12 T 11-10-2018 AL543_04405 0b2cd6591d0da6f3605a749825df12ab 296 Pfam PF11060 Protein of unknown function (DUF2861) 28 291 1.4E-93 T 11-10-2018 IPR021290 Protein of unknown function DUF2861 AL543_05285 95f235e033493a7ea88aa98f25d32b3d 117 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 26 115 1.1E-38 T 11-10-2018 IPR007711 Toxin HigB-1 AL543_05285 95f235e033493a7ea88aa98f25d32b3d 117 Gene3D G3DSA:3.30.2310.20 24 117 9.1E-18 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily AL543_05285 95f235e033493a7ea88aa98f25d32b3d 117 SUPERFAMILY SSF143011 23 115 2.35E-17 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily AL543_11215 4928b0c81d03dfd0c8400aaf6d4d4bdd 1232 SUPERFAMILY SSF51126 157 248 1.41E-6 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor AL543_11215 4928b0c81d03dfd0c8400aaf6d4d4bdd 1232 SUPERFAMILY SSF49899 273 526 8.71E-23 T 11-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AL543_12575 8e92f239cb2bdc3efa0eb57703fd919c 307 Gene3D G3DSA:3.40.50.10490 8 225 4.0E-84 T 11-10-2018 AL543_12575 8e92f239cb2bdc3efa0eb57703fd919c 307 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 192 209 - T 11-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 AL543_12575 8e92f239cb2bdc3efa0eb57703fd919c 307 Gene3D G3DSA:1.10.8.1080 226 304 2.8E-31 T 11-10-2018 AL543_12575 8e92f239cb2bdc3efa0eb57703fd919c 307 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 13 303 1.5E-131 T 11-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 AL543_12575 8e92f239cb2bdc3efa0eb57703fd919c 307 Pfam PF13580 SIS domain 52 172 1.9E-12 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL543_12575 8e92f239cb2bdc3efa0eb57703fd919c 307 SUPERFAMILY SSF53697 12 255 7.79E-75 T 11-10-2018 AL543_12575 8e92f239cb2bdc3efa0eb57703fd919c 307 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 9 302 43.995 T 11-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 AL543_14115 4980fe38876146a6f6d0070e0b8489c8 1537 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 67 139 1.7E-24 T 11-10-2018 IPR020012 Motility protein FimV, N-terminal AL543_14115 4980fe38876146a6f6d0070e0b8489c8 1537 Gene3D G3DSA:1.20.58.2200 1475 1533 6.9E-14 T 11-10-2018 IPR038440 FimV, C-terminal domain superfamily AL543_14115 4980fe38876146a6f6d0070e0b8489c8 1537 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 1491 1533 5.3E-16 T 11-10-2018 IPR020011 Motility protein FimV, C-terminal AL543_19005 2159b88be9261ca8cf4984051eabea7d 354 Pfam PF13343 Bacterial extracellular solute-binding protein 91 310 2.7E-33 T 11-10-2018 AL543_19005 2159b88be9261ca8cf4984051eabea7d 354 Gene3D G3DSA:3.40.190.10 143 259 2.9E-36 T 11-10-2018 AL543_19005 2159b88be9261ca8cf4984051eabea7d 354 Gene3D G3DSA:3.40.190.10 63 314 2.9E-36 T 11-10-2018 AL543_19005 2159b88be9261ca8cf4984051eabea7d 354 SUPERFAMILY SSF53850 40 347 4.3E-46 T 11-10-2018 AL543_12550 a7d083b3372d0cc05d25c0fd691e686f 144 Gene3D G3DSA:2.40.10.330 72 129 7.5E-43 T 11-10-2018 AL543_12550 a7d083b3372d0cc05d25c0fd691e686f 144 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 140 1.3E-13 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AL543_12550 a7d083b3372d0cc05d25c0fd691e686f 144 SUPERFAMILY SSF54534 4 143 1.77E-39 T 11-10-2018 AL543_12550 a7d083b3372d0cc05d25c0fd691e686f 144 Gene3D G3DSA:3.10.50.40 13 141 7.5E-43 T 11-10-2018 AL543_04225 1767d13f7349591b23a5fda1e7710c74 263 Pfam PF01435 Peptidase family M48 72 246 2.1E-46 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AL543_04225 1767d13f7349591b23a5fda1e7710c74 263 Gene3D G3DSA:3.30.2010.10 53 140 1.2E-8 T 11-10-2018 AL543_05295 564d8cd1f22df1fb4cb2317971bde897 80 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 1 78 3.8E-38 T 11-10-2018 IPR022789 Antitoxin ParD AL543_05295 564d8cd1f22df1fb4cb2317971bde897 80 SUPERFAMILY SSF47598 4 46 1.78E-9 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 AL543_05295 564d8cd1f22df1fb4cb2317971bde897 80 Gene3D G3DSA:1.10.8.1250 10 80 1.3E-25 T 11-10-2018 IPR038296 Antitoxin ParD superfamily AL543_05295 564d8cd1f22df1fb4cb2317971bde897 80 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 4 71 1.6E-30 T 11-10-2018 IPR022789 Antitoxin ParD AL543_10545 bce68e652b466b62975d3e527a95f244 436 SUPERFAMILY SSF52540 85 363 7.48E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_10545 bce68e652b466b62975d3e527a95f244 436 Gene3D G3DSA:3.40.50.300 229 392 3.8E-46 T 11-10-2018 AL543_10545 bce68e652b466b62975d3e527a95f244 436 SMART SM00490 270 351 1.9E-32 T 11-10-2018 IPR001650 Helicase, C-terminal AL543_10545 bce68e652b466b62975d3e527a95f244 436 Gene3D G3DSA:3.40.50.300 2 222 1.8E-72 T 11-10-2018 AL543_10545 bce68e652b466b62975d3e527a95f244 436 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AL543_10545 bce68e652b466b62975d3e527a95f244 436 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 50.503 T 11-10-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 AL543_10545 bce68e652b466b62975d3e527a95f244 436 Pfam PF00270 DEAD/DEAH box helicase 33 207 2.6E-46 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL543_10545 bce68e652b466b62975d3e527a95f244 436 SMART SM00487 28 234 5.9E-55 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL543_10545 bce68e652b466b62975d3e527a95f244 436 Pfam PF00271 Helicase conserved C-terminal domain 245 351 1.7E-30 T 11-10-2018 IPR001650 Helicase, C-terminal AL543_00470 bddffaef415af81d5ba908e32ecc4cf5 100 Gene3D G3DSA:3.30.70.860 1 100 1.1E-44 T 11-10-2018 IPR035571 UPF0234-like, C-terminal AL543_00470 bddffaef415af81d5ba908e32ecc4cf5 100 Pfam PF04175 Protein of unknown function (DUF406) 8 96 1.2E-28 T 11-10-2018 IPR005272 Conserved hypothetical protein CHP00743 AL543_00795 349c1fb4ff8590b295e61814c6225ea4 582 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 22 571 3.5E-105 T 11-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 AL543_00795 349c1fb4ff8590b295e61814c6225ea4 582 Pfam PF02652 L-lactate permease 25 565 5.3E-108 T 11-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 AL543_18085 e6efd1bcf957cc845936a64915b8c2e8 405 Gene3D G3DSA:3.40.50.300 154 389 5.4E-42 T 11-10-2018 AL543_18085 e6efd1bcf957cc845936a64915b8c2e8 405 SUPERFAMILY SSF52540 155 389 1.06E-27 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_01985 8104f625a8868a6e0e74f3fce377db46 297 Pfam PF00892 EamA-like transporter family 150 281 1.2E-16 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL543_01985 8104f625a8868a6e0e74f3fce377db46 297 Pfam PF00892 EamA-like transporter family 9 136 5.7E-18 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL543_01985 8104f625a8868a6e0e74f3fce377db46 297 SUPERFAMILY SSF103481 189 284 1.83E-15 T 11-10-2018 AL543_01985 8104f625a8868a6e0e74f3fce377db46 297 SUPERFAMILY SSF103481 39 138 4.97E-15 T 11-10-2018 AL543_01415 b8b108cbecdd985998ae663667e7e199 329 Pfam PF03547 Membrane transport protein 182 318 1.7E-12 T 11-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 AL543_09860 7c14b1369818e37106377357cd2d3db5 83 Pfam PF04380 Membrane fusogenic activity 1 78 4.8E-27 T 11-10-2018 IPR007475 Membrane fusogenic activity AL543_10160 166e698ec41b917a9ed1618034514731 325 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 7 313 50.777 T 11-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 AL543_10160 166e698ec41b917a9ed1618034514731 325 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 15 308 5.0E-76 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AL543_10160 166e698ec41b917a9ed1618034514731 325 PIRSF PIRSF026649 13 316 6.2E-86 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AL543_10160 166e698ec41b917a9ed1618034514731 325 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 14 316 5.8E-117 T 11-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 AL543_05720 03615bfdcf48f4543156952ed7021806 386 SUPERFAMILY SSF161098 169 362 2.22E-23 T 11-10-2018 IPR035906 MetI-like superfamily AL543_05720 03615bfdcf48f4543156952ed7021806 386 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 26 78 1.7E-9 T 11-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AL543_05720 03615bfdcf48f4543156952ed7021806 386 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 192 379 1.7E-28 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL543_05720 03615bfdcf48f4543156952ed7021806 386 Gene3D G3DSA:1.10.3720.10 162 377 2.9E-22 T 11-10-2018 IPR035906 MetI-like superfamily AL543_17405 bb742b3de6009e37a227b4ceedaa02e5 836 Pfam PF02687 FtsX-like permease family 734 828 4.1E-10 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AL543_17405 bb742b3de6009e37a227b4ceedaa02e5 836 Pfam PF02687 FtsX-like permease family 290 387 1.5E-8 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AL543_09780 e4e9e1bcb9b8b14862d8ae4fb74da9b5 161 SUPERFAMILY SSF52255 2 159 7.98E-67 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 AL543_09780 e4e9e1bcb9b8b14862d8ae4fb74da9b5 161 Pfam PF00731 AIR carboxylase 3 150 1.3E-64 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AL543_09780 e4e9e1bcb9b8b14862d8ae4fb74da9b5 161 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 3 156 32.541 T 11-10-2018 IPR033747 Class I PurE AL543_09780 e4e9e1bcb9b8b14862d8ae4fb74da9b5 161 SMART SM01001 1 152 1.2E-102 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AL543_09780 e4e9e1bcb9b8b14862d8ae4fb74da9b5 161 PIRSF PIRSF001338 1 161 2.5E-68 T 11-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 AL543_09780 e4e9e1bcb9b8b14862d8ae4fb74da9b5 161 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 3 157 2.4E-68 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AL543_09780 e4e9e1bcb9b8b14862d8ae4fb74da9b5 161 Gene3D G3DSA:3.40.50.7700 1 161 3.8E-73 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 AL543_19100 2ae44b59e4f7f28da51122041827b68d 196 Pfam PF13305 WHG domain 92 172 2.0E-11 T 11-10-2018 IPR025996 WHG domain AL543_19100 2ae44b59e4f7f28da51122041827b68d 196 SUPERFAMILY SSF46689 7 79 1.99E-6 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_19100 2ae44b59e4f7f28da51122041827b68d 196 SUPERFAMILY SSF48498 84 195 6.12E-19 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AL543_19100 2ae44b59e4f7f28da51122041827b68d 196 Gene3D G3DSA:1.10.357.10 1 192 1.8E-40 T 11-10-2018 AL543_05170 1b5af6dd1d2977b5ae4f5ea3345187cc 57 Pfam PF04875 Protein of unknown function, DUF645 24 57 1.6E-20 T 11-10-2018 IPR006959 Protein of unknown function DUF645 AL543_03315 5e3888d9ddd8918cd6ebf1e994e68b62 449 Gene3D G3DSA:3.30.70.270 306 425 2.5E-6 T 11-10-2018 AL543_03315 5e3888d9ddd8918cd6ebf1e994e68b62 449 SUPERFAMILY SSF55073 309 407 3.06E-6 T 11-10-2018 IPR029787 Nucleotide cyclase AL543_03315 5e3888d9ddd8918cd6ebf1e994e68b62 449 Pfam PF00990 Diguanylate cyclase, GGDEF domain 324 408 9.5E-8 T 11-10-2018 IPR000160 GGDEF domain AL543_06260 e91c1e437edbc486e5f6a40b37560018 256 Pfam PF11101 Protein of unknown function (DUF2884) 30 254 1.8E-67 T 11-10-2018 IPR021307 Protein of unknown function DUF2884 AL543_19565 e1a8ff02bc2cd6200e9bff60f10c9024 404 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 3 117 3.8E-31 T 11-10-2018 IPR017560 Cytochrome c-type biogenesis protein CcmI AL543_19565 e1a8ff02bc2cd6200e9bff60f10c9024 404 SUPERFAMILY SSF48452 163 264 1.14E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_19565 e1a8ff02bc2cd6200e9bff60f10c9024 404 Pfam PF14559 Tetratricopeptide repeat 177 244 2.0E-7 T 11-10-2018 AL543_19565 e1a8ff02bc2cd6200e9bff60f10c9024 404 Gene3D G3DSA:1.25.40.10 153 291 2.4E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_10480 339ab06dd9aff5e8c97dee80eb1bc96f 295 SUPERFAMILY SSF53335 43 273 1.06E-46 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL543_10480 339ab06dd9aff5e8c97dee80eb1bc96f 295 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 293 33.919 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AL543_10480 339ab06dd9aff5e8c97dee80eb1bc96f 295 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 287 6.4E-110 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AL543_10480 339ab06dd9aff5e8c97dee80eb1bc96f 295 Gene3D G3DSA:3.40.50.150 102 294 1.6E-58 T 11-10-2018 AL543_10480 339ab06dd9aff5e8c97dee80eb1bc96f 295 PIRSF PIRSF000401 1 295 1.3E-102 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AL543_10480 339ab06dd9aff5e8c97dee80eb1bc96f 295 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 293 2.6E-104 T 11-10-2018 AL543_02710 de84374656ece6ffbb2bef95b4d3e4a6 480 Pfam PF12571 Phage tail-collar fibre protein 4 153 6.7E-16 T 11-10-2018 IPR022225 Phage tail fibre protein AL543_12205 ecf6f03ac7d15d2365f380d597183b5d 328 SUPERFAMILY SSF161098 93 324 2.83E-13 T 11-10-2018 IPR035906 MetI-like superfamily AL543_12205 ecf6f03ac7d15d2365f380d597183b5d 328 Gene3D G3DSA:1.10.3720.10 88 327 7.6E-18 T 11-10-2018 IPR035906 MetI-like superfamily AL543_12205 ecf6f03ac7d15d2365f380d597183b5d 328 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 325 4.5E-39 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL543_01560 37cd28c9de46212f35124b60d3fa8499 265 Gene3D G3DSA:1.10.1660.10 2 75 1.3E-24 T 11-10-2018 AL543_01560 37cd28c9de46212f35124b60d3fa8499 265 SUPERFAMILY SSF46955 8 105 1.92E-18 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AL543_01560 37cd28c9de46212f35124b60d3fa8499 265 Pfam PF13411 MerR HTH family regulatory protein 8 76 3.1E-18 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL543_01560 37cd28c9de46212f35124b60d3fa8499 265 SMART SM00422 8 77 2.1E-17 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL543_13150 d81f8ca75727bfb70310da3bb4f679a6 238 Pfam PF02661 Fic/DOC family 52 143 1.4E-11 T 11-10-2018 IPR003812 Fido domain AL543_13150 d81f8ca75727bfb70310da3bb4f679a6 238 Gene3D G3DSA:1.10.3290.10 6 195 3.2E-29 T 11-10-2018 IPR036597 Fido-like domain superfamily AL543_13150 d81f8ca75727bfb70310da3bb4f679a6 238 SUPERFAMILY SSF140931 29 181 8.89E-26 T 11-10-2018 IPR036597 Fido-like domain superfamily AL543_13500 04e705df0d6287469b211425dc2aa56a 214 Gene3D G3DSA:1.10.3680.10 89 213 4.8E-11 T 11-10-2018 IPR029024 TerB-like AL543_13500 04e705df0d6287469b211425dc2aa56a 214 SUPERFAMILY SSF158682 71 213 3.53E-27 T 11-10-2018 IPR029024 TerB-like AL543_13500 04e705df0d6287469b211425dc2aa56a 214 Pfam PF04391 Protein of unknown function (DUF533) 37 211 2.8E-64 T 11-10-2018 IPR007486 Inner membrane protein YebE AL543_04890 c96d6ed079f62eb8a692245ff00d5e6c 92 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 2 89 1.0E-14 T 11-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AL543_04890 c96d6ed079f62eb8a692245ff00d5e6c 92 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 2 89 1.1E-14 T 11-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AL543_04890 c96d6ed079f62eb8a692245ff00d5e6c 92 Gene3D G3DSA:3.30.2310.20 1 90 1.8E-16 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily AL543_13265 bd5576487b8cf223abfd616134b5e168 98 ProDom PD015389 LYASE CITRATE ACYL CARRIER GAMMA CHAIN CITD PRECURSOR SIGNAL DIRECT 10 80 5.0E-34 T 11-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 AL543_13265 bd5576487b8cf223abfd616134b5e168 98 Hamap MF_00805 Citrate lyase acyl carrier protein [citD]. 1 97 27.943 T 11-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 AL543_13265 bd5576487b8cf223abfd616134b5e168 98 TIGRFAM TIGR01608 citD: citrate lyase acyl carrier protein 1 94 1.9E-35 T 11-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 AL543_13265 bd5576487b8cf223abfd616134b5e168 98 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 6 86 8.9E-32 T 11-10-2018 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein AL543_13265 bd5576487b8cf223abfd616134b5e168 98 PIRSF PIRSF002736 1 97 9.4E-42 T 11-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 AL543_09605 887a6df0ca5a13bdacf9dca8fd08c69c 145 SUPERFAMILY SSF49764 6 138 2.93E-23 T 11-10-2018 IPR008978 HSP20-like chaperone AL543_09605 887a6df0ca5a13bdacf9dca8fd08c69c 145 Gene3D G3DSA:2.60.40.790 34 137 1.0E-23 T 11-10-2018 IPR008978 HSP20-like chaperone AL543_09605 887a6df0ca5a13bdacf9dca8fd08c69c 145 Pfam PF00011 Hsp20/alpha crystallin family 43 137 3.1E-20 T 11-10-2018 IPR002068 Alpha crystallin/Hsp20 domain AL543_06710 9d3c9a6bc74a5b7390ea3ba2732b205e 276 SUPERFAMILY SSF53807 24 270 2.28E-60 T 11-10-2018 AL543_06710 9d3c9a6bc74a5b7390ea3ba2732b205e 276 Pfam PF01497 Periplasmic binding protein 28 249 1.9E-29 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain AL543_06710 9d3c9a6bc74a5b7390ea3ba2732b205e 276 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 4 274 51.48 T 11-10-2018 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 AL543_06710 9d3c9a6bc74a5b7390ea3ba2732b205e 276 Gene3D G3DSA:3.40.50.1980 24 142 9.4E-37 T 11-10-2018 AL543_06710 9d3c9a6bc74a5b7390ea3ba2732b205e 276 Gene3D G3DSA:3.40.50.1980 145 272 3.4E-32 T 11-10-2018 AL543_15670 364bd57b656f5fd97dd3721344e1fe76 216 SUPERFAMILY SSF142695 37 190 1.28E-54 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AL543_15670 364bd57b656f5fd97dd3721344e1fe76 216 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 21 216 37.515 T 11-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AL543_15670 364bd57b656f5fd97dd3721344e1fe76 216 Gene3D G3DSA:3.40.50.10990 22 192 3.3E-64 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AL543_15670 364bd57b656f5fd97dd3721344e1fe76 216 Pfam PF00925 GTP cyclohydrolase II 37 189 2.3E-59 T 11-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AL543_03230 0aca061e8fb0d4d12f3fd751b4be1765 242 SUPERFAMILY SSF52540 3 234 3.79E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_03230 0aca061e8fb0d4d12f3fd751b4be1765 242 Gene3D G3DSA:3.40.50.300 1 241 3.1E-72 T 11-10-2018 AL543_03230 0aca061e8fb0d4d12f3fd751b4be1765 242 Pfam PF00005 ABC transporter 18 170 3.9E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_03230 0aca061e8fb0d4d12f3fd751b4be1765 242 PIRSF PIRSF039085 1 242 9.9E-89 T 11-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AL543_03230 0aca061e8fb0d4d12f3fd751b4be1765 242 SMART SM00382 27 218 8.9E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_03230 0aca061e8fb0d4d12f3fd751b4be1765 242 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_17205 b6729e1a63111b241f47e6441971357f 146 PIRSF PIRSF028065 1 146 1.1E-71 T 11-10-2018 IPR016865 Inner membrane protein RclC AL543_17205 b6729e1a63111b241f47e6441971357f 146 Pfam PF04224 Protein of unknown function, DUF417 4 145 6.1E-43 T 11-10-2018 IPR007339 Inner membrane protein RclC-like AL543_11910 be493bf820ba69347c1325faa80b66f7 153 Pfam PF09335 SNARE associated Golgi protein 50 148 1.8E-10 T 11-10-2018 IPR032816 SNARE associated Golgi protein AL543_00235 5012af61597beb32b506ace5b665e9ca 599 Pfam PF09369 Domain of unknown function (DUF1998) 461 557 6.7E-7 T 11-10-2018 IPR018973 DEAD/DEAH-box helicase, putative AL543_06925 9b5c38eda1ef71a2e67567cfb3077a8b 291 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 17 124 9.2E-35 T 11-10-2018 IPR010627 Peptidase A24A, N-terminal AL543_06925 9b5c38eda1ef71a2e67567cfb3077a8b 291 Pfam PF01478 Type IV leader peptidase family 135 244 1.4E-28 T 11-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 AL543_06925 9b5c38eda1ef71a2e67567cfb3077a8b 291 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 224 239 1.2E-29 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AL543_06925 9b5c38eda1ef71a2e67567cfb3077a8b 291 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 201 211 1.2E-29 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AL543_06925 9b5c38eda1ef71a2e67567cfb3077a8b 291 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 212 223 1.2E-29 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AL543_06925 9b5c38eda1ef71a2e67567cfb3077a8b 291 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 143 160 1.2E-29 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AL543_15280 f31f2320f7a645c74b5872d035430eac 223 Pfam PF00691 OmpA family 119 213 1.3E-19 T 11-10-2018 IPR006665 OmpA-like domain AL543_15280 f31f2320f7a645c74b5872d035430eac 223 Gene3D G3DSA:3.30.1330.60 81 223 3.5E-41 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL543_15280 f31f2320f7a645c74b5872d035430eac 223 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 164 181 4.6E-5 T 11-10-2018 AL543_15280 f31f2320f7a645c74b5872d035430eac 223 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 202 222 4.6E-5 T 11-10-2018 AL543_15280 f31f2320f7a645c74b5872d035430eac 223 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 182 201 4.6E-5 T 11-10-2018 AL543_15280 f31f2320f7a645c74b5872d035430eac 223 Pfam PF13488 Glycine zipper 39 87 3.2E-12 T 11-10-2018 IPR039567 Glycine zipper domain AL543_15280 f31f2320f7a645c74b5872d035430eac 223 SUPERFAMILY SSF103088 107 222 1.31E-35 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL543_15280 f31f2320f7a645c74b5872d035430eac 223 PRINTS PR01021 OMPA domain signature 149 164 6.7E-8 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL543_15280 f31f2320f7a645c74b5872d035430eac 223 PRINTS PR01021 OMPA domain signature 164 180 6.7E-8 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL543_03975 083b25c06198720248e2234d656d24f1 249 SUPERFAMILY SSF56281 6 227 2.32E-11 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AL543_03975 083b25c06198720248e2234d656d24f1 249 Pfam PF14234 Domain of unknown function (DUF4336) 6 148 1.1E-13 T 11-10-2018 IPR025638 Protein of unknown function DUF4336 AL543_19935 b0ec14d1c36f5000a9f2b41631c8b636 650 Pfam PF02120 Flagellar hook-length control protein FliK 521 604 1.9E-26 T 11-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal AL543_19935 b0ec14d1c36f5000a9f2b41631c8b636 650 Gene3D G3DSA:3.30.750.140 500 613 3.3E-34 T 11-10-2018 IPR038610 FliK-like, C-terminal domain superfamily AL543_04740 77d13f5f1561fb8f688132d39fc4a08c 177 SUPERFAMILY SSF69118 5 171 2.26E-42 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AL543_04740 77d13f5f1561fb8f688132d39fc4a08c 177 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 55 97 4.6E-14 T 11-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AL543_04740 77d13f5f1561fb8f688132d39fc4a08c 177 Gene3D G3DSA:1.20.1290.10 12 173 3.0E-39 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AL543_04740 77d13f5f1561fb8f688132d39fc4a08c 177 Pfam PF02627 Carboxymuconolactone decarboxylase family 41 105 2.0E-16 T 11-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AL543_03025 6b64b4788b6c1f739bc9d8e28e181c92 485 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 35 199 1.1E-32 T 11-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal AL543_03025 6b64b4788b6c1f739bc9d8e28e181c92 485 SUPERFAMILY SSF81296 35 203 7.56E-55 T 11-10-2018 IPR014756 Immunoglobulin E-set AL543_03025 6b64b4788b6c1f739bc9d8e28e181c92 485 Gene3D G3DSA:3.30.70.2150 209 316 1.4E-43 T 11-10-2018 AL543_03025 6b64b4788b6c1f739bc9d8e28e181c92 485 Hamap MF_01905 GlcNAc-binding protein A [gbpA]. 3 485 56.922 T 11-10-2018 IPR020879 N-acetylglucosamine-binding protein A GO:0008061 AL543_03025 6b64b4788b6c1f739bc9d8e28e181c92 485 Gene3D G3DSA:2.70.50.50 24 202 8.6E-82 T 11-10-2018 AL543_03025 6b64b4788b6c1f739bc9d8e28e181c92 485 Gene3D G3DSA:2.60.40.2550 317 414 1.8E-46 T 11-10-2018 AL543_09875 7e7b44b65a2b53e5ed3088b6b5990eec 190 Gene3D G3DSA:1.10.357.10 2 190 1.9E-65 T 11-10-2018 AL543_09875 7e7b44b65a2b53e5ed3088b6b5990eec 190 ProSitePatterns PS01081 TetR-type HTH domain signature. 22 53 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AL543_09875 7e7b44b65a2b53e5ed3088b6b5990eec 190 SUPERFAMILY SSF46689 6 81 3.99E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_09875 7e7b44b65a2b53e5ed3088b6b5990eec 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 56 2.3E-15 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL543_09875 7e7b44b65a2b53e5ed3088b6b5990eec 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 1.9E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL543_09875 7e7b44b65a2b53e5ed3088b6b5990eec 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 1.9E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL543_17010 fa9bd78e6f57c5205235142b82b1c0f4 252 PIRSF PIRSF028069 1 252 2.5E-105 T 11-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 AL543_17010 fa9bd78e6f57c5205235142b82b1c0f4 252 Pfam PF11932 Protein of unknown function (DUF3450) 5 245 5.3E-85 T 11-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 AL543_10575 9ad3a399d892eca588632d79fa836c97 236 SUPERFAMILY SSF63380 2 101 6.95E-18 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AL543_10575 9ad3a399d892eca588632d79fa836c97 236 Gene3D G3DSA:2.40.30.10 1 102 1.0E-22 T 11-10-2018 AL543_10575 9ad3a399d892eca588632d79fa836c97 236 Pfam PF00970 Oxidoreductase FAD-binding domain 15 100 1.2E-5 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 AL543_10575 9ad3a399d892eca588632d79fa836c97 236 Gene3D G3DSA:3.40.50.80 103 236 1.4E-30 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AL543_10575 9ad3a399d892eca588632d79fa836c97 236 Pfam PF00175 Oxidoreductase NAD-binding domain 111 214 2.3E-22 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AL543_10575 9ad3a399d892eca588632d79fa836c97 236 PRINTS PR00410 Phenol hydroxylase reductase family signature 135 144 3.5E-12 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL543_10575 9ad3a399d892eca588632d79fa836c97 236 PRINTS PR00410 Phenol hydroxylase reductase family signature 110 129 3.5E-12 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL543_10575 9ad3a399d892eca588632d79fa836c97 236 PRINTS PR00410 Phenol hydroxylase reductase family signature 30 42 3.5E-12 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL543_10575 9ad3a399d892eca588632d79fa836c97 236 PRINTS PR00410 Phenol hydroxylase reductase family signature 46 53 3.5E-12 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL543_10575 9ad3a399d892eca588632d79fa836c97 236 SUPERFAMILY SSF52343 103 234 6.29E-35 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AL543_14640 fb4f25ff44c1777feae1453c353aaf16 294 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 38 294 5.7E-90 T 11-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 AL543_19210 62d16486e98567f2a5bc45e765b41c2d 232 SUPERFAMILY SSF53067 111 218 2.46E-23 T 11-10-2018 AL543_19210 62d16486e98567f2a5bc45e765b41c2d 232 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 5 220 5.8E-68 T 11-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 AL543_19210 62d16486e98567f2a5bc45e765b41c2d 232 Gene3D G3DSA:3.30.420.40 5 200 1.1E-78 T 11-10-2018 AL543_19210 62d16486e98567f2a5bc45e765b41c2d 232 Gene3D G3DSA:3.30.420.40 96 189 1.1E-78 T 11-10-2018 AL543_19210 62d16486e98567f2a5bc45e765b41c2d 232 SUPERFAMILY SSF53067 4 107 1.12E-31 T 11-10-2018 AL543_19210 62d16486e98567f2a5bc45e765b41c2d 232 Pfam PF00814 Glycoprotease family 30 152 5.9E-32 T 11-10-2018 IPR000905 Gcp-like domain AL543_19200 7185692589c72e8659bdf06bd38f8328 185 Pfam PF03843 Outer membrane lipoprotein Slp family 17 168 6.5E-44 T 11-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 AL543_19200 7185692589c72e8659bdf06bd38f8328 185 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 8 160 5.4E-33 T 11-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 AL543_19200 7185692589c72e8659bdf06bd38f8328 185 PIRSF PIRSF004982 2 185 2.2E-67 T 11-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 AL543_00015 14ab3c1ed78fe6f305bcfe812b9e5faa 318 Gene3D G3DSA:3.40.190.10 98 310 7.5E-31 T 11-10-2018 AL543_00015 14ab3c1ed78fe6f305bcfe812b9e5faa 318 SUPERFAMILY SSF53850 92 314 5.97E-26 T 11-10-2018 AL543_00015 14ab3c1ed78fe6f305bcfe812b9e5faa 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 1.2E-12 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL543_00015 14ab3c1ed78fe6f305bcfe812b9e5faa 318 Gene3D G3DSA:1.10.10.10 1 88 2.1E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_00015 14ab3c1ed78fe6f305bcfe812b9e5faa 318 Pfam PF03466 LysR substrate binding domain 98 312 7.4E-11 T 11-10-2018 IPR005119 LysR, substrate-binding AL543_00015 14ab3c1ed78fe6f305bcfe812b9e5faa 318 Gene3D G3DSA:3.40.190.10 180 281 7.5E-31 T 11-10-2018 AL543_00015 14ab3c1ed78fe6f305bcfe812b9e5faa 318 SUPERFAMILY SSF46785 6 87 7.03E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_12880 9170b98e8c53847fa06a33993955b0fa 254 Pfam PF03932 CutC family 4 205 1.5E-90 T 11-10-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 AL543_12880 9170b98e8c53847fa06a33993955b0fa 254 Gene3D G3DSA:3.20.20.380 3 251 1.3E-86 T 11-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 AL543_12880 9170b98e8c53847fa06a33993955b0fa 254 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 3 207 30.981 T 11-10-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 AL543_12880 9170b98e8c53847fa06a33993955b0fa 254 SUPERFAMILY SSF110395 4 249 5.23E-71 T 11-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 AL543_20050 f3a82e08acebccd9eae4a131342a9df3 240 SUPERFAMILY SSF55166 31 191 9.42E-22 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AL543_20050 f3a82e08acebccd9eae4a131342a9df3 240 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 41 192 1.7E-35 T 11-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 AL543_20050 f3a82e08acebccd9eae4a131342a9df3 240 Gene3D G3DSA:3.30.1380.10 14 204 5.5E-35 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AL543_10770 ddcd1217030602516112db4f7fc5537f 181 SUPERFAMILY SSF53098 3 180 6.42E-50 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_10770 ddcd1217030602516112db4f7fc5537f 181 Pfam PF00929 Exonuclease 9 170 3.8E-36 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL543_10770 ddcd1217030602516112db4f7fc5537f 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 43.178 T 11-10-2018 IPR022894 Oligoribonuclease GO:0000175 AL543_10770 ddcd1217030602516112db4f7fc5537f 181 SMART SM00479 7 180 5.8E-20 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL543_10770 ddcd1217030602516112db4f7fc5537f 181 Gene3D G3DSA:3.30.420.10 1 181 1.0E-74 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AL543_10085 ca4bae740348228aef81552356b861cb 99 Pfam PF12305 Protein of unknown function (DUF3630) 5 96 2.2E-36 T 11-10-2018 IPR022080 Protein of unknown function DUF3630 AL543_03320 e0e8b3f03c2b7b287a9c673ddb7a5040 438 Gene3D G3DSA:3.90.550.10 50 283 3.5E-32 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL543_03320 e0e8b3f03c2b7b287a9c673ddb7a5040 438 SUPERFAMILY SSF53448 53 342 2.81E-41 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL543_03320 e0e8b3f03c2b7b287a9c673ddb7a5040 438 Pfam PF13641 Glycosyltransferase like family 2 61 294 1.3E-19 T 11-10-2018 AL543_06380 5231d9d92006756aca411e25bbdd3936 271 SUPERFAMILY SSF69572 9 268 2.62E-64 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 AL543_06380 5231d9d92006756aca411e25bbdd3936 271 Gene3D G3DSA:3.40.50.720 5 271 1.0E-107 T 11-10-2018 AL543_06380 5231d9d92006756aca411e25bbdd3936 271 Pfam PF00899 ThiF family 26 267 2.3E-38 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AL543_11725 feb7c8d3afe6a83c395c89d46eaba1d3 200 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 2 194 7.7E-75 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AL543_11725 feb7c8d3afe6a83c395c89d46eaba1d3 200 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 19.008 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AL543_11725 feb7c8d3afe6a83c395c89d46eaba1d3 200 Pfam PF02660 Glycerol-3-phosphate acyltransferase 11 184 4.7E-51 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AL543_11725 feb7c8d3afe6a83c395c89d46eaba1d3 200 SMART SM01207 10 185 1.2E-85 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AL543_06210 4c9798bc2c6bde747a1fc854ae61aeae 129 Pfam PF07417 Transcriptional regulator Crl 6 122 2.6E-48 T 11-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 AL543_06210 4c9798bc2c6bde747a1fc854ae61aeae 129 Gene3D G3DSA:3.30.310.230 2 129 8.7E-45 T 11-10-2018 IPR038208 Sigma factor-binding protein Crl superfamily GO:0045893 AL543_06210 4c9798bc2c6bde747a1fc854ae61aeae 129 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 4 129 30.321 T 11-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 AL543_18565 e72c707e9c1166f9f9932799fc4bb503 406 Pfam PF02687 FtsX-like permease family 300 399 1.9E-11 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AL543_18565 e72c707e9c1166f9f9932799fc4bb503 406 Pfam PF12704 MacB-like periplasmic core domain 33 211 3.5E-12 T 11-10-2018 IPR025857 MacB-like periplasmic core domain AL543_18565 e72c707e9c1166f9f9932799fc4bb503 406 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 8 406 4.1E-131 T 11-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 AL543_04800 18d062109262b25d1620ab1e2a97c823 136 Pfam PF14106 Domain of unknown function (DUF4279) 14 131 8.1E-21 T 11-10-2018 IPR025459 Protein of unknown function DUF4279 AL543_04720 6c326f2c7f87b6812fc0eedfd74edb94 226 SUPERFAMILY SSF50630 92 223 1.5E-40 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily AL543_04720 6c326f2c7f87b6812fc0eedfd74edb94 226 Gene3D G3DSA:2.40.70.10 89 216 4.6E-40 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily AL543_04720 6c326f2c7f87b6812fc0eedfd74edb94 226 Pfam PF05618 Putative ATP-dependant zinc protease 92 226 4.4E-47 T 11-10-2018 AL543_11660 7afd3ef3e235f54d68852abe3359649a 231 Gene3D G3DSA:3.30.110.170 30 227 2.5E-48 T 11-10-2018 AL543_11660 7afd3ef3e235f54d68852abe3359649a 231 Gene3D G3DSA:3.30.70.2970 40 147 2.5E-48 T 11-10-2018 AL543_11660 7afd3ef3e235f54d68852abe3359649a 231 Pfam PF04402 Protein of unknown function (DUF541) 28 227 1.9E-39 T 11-10-2018 IPR007497 Protein of unknown function DUF541 AL543_06775 35da7c2b8cd1d075f61a7f64fda2b29b 305 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 280 46.442 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 AL543_06775 35da7c2b8cd1d075f61a7f64fda2b29b 305 Gene3D G3DSA:3.30.230.20 1 128 4.7E-52 T 11-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 AL543_06775 35da7c2b8cd1d075f61a7f64fda2b29b 305 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 298 8.5E-142 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 AL543_06775 35da7c2b8cd1d075f61a7f64fda2b29b 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 7.9E-108 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 AL543_06775 35da7c2b8cd1d075f61a7f64fda2b29b 305 SUPERFAMILY SSF54211 3 126 1.82E-42 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL543_06775 35da7c2b8cd1d075f61a7f64fda2b29b 305 SUPERFAMILY SSF54211 134 278 3.53E-52 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL543_06775 35da7c2b8cd1d075f61a7f64fda2b29b 305 Gene3D G3DSA:3.30.1700.10 129 305 1.0E-69 T 11-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 AL543_10865 1b94fdaad6d00bfb7de6d5a7c0ae32c4 75 Hamap MF_00715 Protein SlyX [slyX]. 8 75 17.737 T 11-10-2018 IPR007236 SlyX AL543_10865 1b94fdaad6d00bfb7de6d5a7c0ae32c4 75 Pfam PF04102 SlyX 9 75 1.9E-24 T 11-10-2018 IPR007236 SlyX AL543_05045 956c5d7b4dd18476d295a709ae8256cc 141 Pfam PF11948 Protein of unknown function (DUF3465) 22 141 4.7E-60 T 11-10-2018 IPR021856 Protein of unknown function DUF3465 AL543_06155 a3e20b2d232f91aee35da925cb4e04b1 127 Pfam PF11944 Protein of unknown function (DUF3461) 1 126 1.0E-54 T 11-10-2018 IPR020911 Uncharacterised protein family UPF0325 AL543_06155 a3e20b2d232f91aee35da925cb4e04b1 127 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 127 30.533 T 11-10-2018 IPR020911 Uncharacterised protein family UPF0325 AL543_06155 a3e20b2d232f91aee35da925cb4e04b1 127 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 126 5.0E-66 T 11-10-2018 IPR020911 Uncharacterised protein family UPF0325 AL543_05095 c73eba37337359c94db81d86e7ef03c6 80 Gene3D G3DSA:3.40.1620.10 1 49 4.9E-7 T 11-10-2018 AL543_05095 c73eba37337359c94db81d86e7ef03c6 80 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 4 53 3.3E-16 T 11-10-2018 AL543_05095 c73eba37337359c94db81d86e7ef03c6 80 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 71 4.9E-13 T 11-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AL543_05095 c73eba37337359c94db81d86e7ef03c6 80 SUPERFAMILY SSF143120 1 73 5.36E-15 T 11-10-2018 IPR036165 YefM-like superfamily AL543_05625 a38e67a93733aa19782a6089471150da 320 Gene3D G3DSA:1.10.443.10 95 310 6.5E-76 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AL543_05625 a38e67a93733aa19782a6089471150da 320 Pfam PF00589 Phage integrase family 105 306 2.0E-44 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL543_05625 a38e67a93733aa19782a6089471150da 320 Gene3D G3DSA:1.10.150.130 1 94 7.9E-29 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AL543_05625 a38e67a93733aa19782a6089471150da 320 SUPERFAMILY SSF56349 99 313 2.47E-45 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL543_05625 a38e67a93733aa19782a6089471150da 320 TIGRFAM TIGR02249 integrase_gron: integron integrase 5 320 2.0E-161 T 11-10-2018 IPR011946 Integrase, integron-type GO:0003677|GO:0006310|GO:0015074 AL543_05625 a38e67a93733aa19782a6089471150da 320 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 7 87 4.9E-25 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AL543_02780 004f9601e41a6a9e923b977d9dcdd593 529 Pfam PF03553 Na+/H+ antiporter family 168 494 3.2E-91 T 11-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 AL543_14250 9112039cfb844b7a141ca58b66b92e05 160 Pfam PF01967 MoaC family 16 151 2.6E-56 T 11-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL543_14250 9112039cfb844b7a141ca58b66b92e05 160 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 5 153 1.7E-71 T 11-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL543_14250 9112039cfb844b7a141ca58b66b92e05 160 Gene3D G3DSA:3.30.70.640 2 160 2.1E-71 T 11-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL543_14250 9112039cfb844b7a141ca58b66b92e05 160 SUPERFAMILY SSF55040 12 156 7.59E-62 T 11-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL543_14250 9112039cfb844b7a141ca58b66b92e05 160 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 3 159 36.202 T 11-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL543_03045 5d267822f2b975e1d88cf943945e2e60 137 Pfam PF11225 Protein of unknown function (DUF3024) 77 136 2.5E-18 T 11-10-2018 IPR021388 Bacteriophage 933W, L0084 AL543_07505 6706bc0ed3addc318fc37b6fe4d7708b 180 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 16 175 24.291 T 11-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 AL543_07505 6706bc0ed3addc318fc37b6fe4d7708b 180 Pfam PF03968 OstA-like protein 45 156 9.0E-29 T 11-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal AL543_07505 6706bc0ed3addc318fc37b6fe4d7708b 180 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 35 175 4.4E-47 T 11-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 AL543_07505 6706bc0ed3addc318fc37b6fe4d7708b 180 Gene3D G3DSA:2.60.450.10 35 172 3.1E-39 T 11-10-2018 AL543_07630 00fd94b019403a240fcddfbbc343d638 227 Pfam PF10986 Protein of unknown function (DUF2796) 33 145 1.2E-27 T 11-10-2018 IPR021253 Protein of unknown function DUF2796 AL543_07630 00fd94b019403a240fcddfbbc343d638 227 Pfam PF10986 Protein of unknown function (DUF2796) 141 223 1.1E-18 T 11-10-2018 IPR021253 Protein of unknown function DUF2796 AL543_17835 18ca72182d3ae1102e3589be3fd69f5e 66 Pfam PF14056 Domain of unknown function (DUF4250) 10 61 7.5E-20 T 11-10-2018 IPR025346 Protein of unknown function DUF4250 AL543_02665 93d4f6c0656a4d7fb4cb9e0bcab102d0 75 Pfam PF16080 Bacteriophage holin family HP1 15 64 2.9E-7 T 11-10-2018 IPR032118 Bacteriophage holin HP1 family AL543_20510 4e7538b84775741febb53b2a899372b2 316 SUPERFAMILY SSF56281 34 305 3.3E-38 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AL543_20510 4e7538b84775741febb53b2a899372b2 316 Pfam PF12706 Beta-lactamase superfamily domain 62 273 8.1E-13 T 11-10-2018 IPR001279 Metallo-beta-lactamase AL543_20510 4e7538b84775741febb53b2a899372b2 316 Gene3D G3DSA:3.60.15.10 33 315 3.9E-40 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AL543_01525 7dbf7164e4de2badbb145ad357fa7ce5 129 PIRSF PIRSF028770 1 129 6.2E-71 T 11-10-2018 IPR011223 Uncharacterised conserved protein UCP028770 AL543_01525 7dbf7164e4de2badbb145ad357fa7ce5 129 Pfam PF11742 Protein of unknown function (DUF3302) 3 78 1.2E-40 T 11-10-2018 IPR011223 Uncharacterised conserved protein UCP028770 AL543_02330 d3ebc4e9c76a604358378b491016ef23 70 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 15 68 5.0E-17 T 11-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor AL543_02330 d3ebc4e9c76a604358378b491016ef23 70 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 4 68 5.0E-31 T 11-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor AL543_09665 431ca059ab62255263d970cbbefa477f 319 Gene3D G3DSA:3.20.10.10 145 296 1.3E-104 T 11-10-2018 AL543_09665 431ca059ab62255263d970cbbefa477f 319 SUPERFAMILY SSF56752 14 314 1.28E-103 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 AL543_09665 431ca059ab62255263d970cbbefa477f 319 Gene3D G3DSA:3.30.470.10 17 134 1.3E-104 T 11-10-2018 AL543_09665 431ca059ab62255263d970cbbefa477f 319 Pfam PF01063 Amino-transferase class IV 43 275 7.5E-47 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 AL543_09665 431ca059ab62255263d970cbbefa477f 319 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 17 314 4.6E-145 T 11-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 AL543_09665 431ca059ab62255263d970cbbefa477f 319 ProSitePatterns PS00770 Aminotransferases class-IV signature. 201 230 - T 11-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 AL543_03630 a0de9ee01bfcfa6adccbc2e763bcdd54 115 Pfam PF09361 Phasin protein 8 108 3.8E-22 T 11-10-2018 IPR018968 Phasin AL543_03630 a0de9ee01bfcfa6adccbc2e763bcdd54 115 PIRSF PIRSF028226 1 115 1.6E-59 T 11-10-2018 IPR014176 Phasin, subfamily 3 AL543_03630 a0de9ee01bfcfa6adccbc2e763bcdd54 115 TIGRFAM TIGR02809 phasin_3: phasin family protein 4 113 1.5E-59 T 11-10-2018 IPR014176 Phasin, subfamily 3 AL543_05920 ea1f480e51fae69621c574d4c02d2bdf 436 Gene3D G3DSA:3.10.580.10 195 348 1.9E-26 T 11-10-2018 AL543_05920 ea1f480e51fae69621c574d4c02d2bdf 436 Pfam PF03471 Transporter associated domain 350 427 1.2E-20 T 11-10-2018 IPR005170 Transporter-associated domain AL543_05920 ea1f480e51fae69621c574d4c02d2bdf 436 SMART SM01091 348 428 2.0E-26 T 11-10-2018 IPR005170 Transporter-associated domain AL543_05920 ea1f480e51fae69621c574d4c02d2bdf 436 SUPERFAMILY SSF54631 201 336 1.42E-18 T 11-10-2018 AL543_05920 ea1f480e51fae69621c574d4c02d2bdf 436 Gene3D G3DSA:3.30.465.10 349 428 8.8E-29 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AL543_05920 ea1f480e51fae69621c574d4c02d2bdf 436 Pfam PF01595 Domain of unknown function DUF21 9 199 1.2E-40 T 11-10-2018 IPR002550 CNNM, transmembrane domain AL543_05920 ea1f480e51fae69621c574d4c02d2bdf 436 SUPERFAMILY SSF56176 346 430 5.18E-22 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AL543_07780 76ccbe69aefad1bfb795b52145b3e6f0 101 Gene3D G3DSA:4.10.830.10 41 101 4.6E-22 T 11-10-2018 AL543_07780 76ccbe69aefad1bfb795b52145b3e6f0 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 11-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07780 76ccbe69aefad1bfb795b52145b3e6f0 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.729 T 11-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid AL543_07780 76ccbe69aefad1bfb795b52145b3e6f0 101 SUPERFAMILY SSF57716 2 101 1.71E-36 T 11-10-2018 AL543_07780 76ccbe69aefad1bfb795b52145b3e6f0 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 7.1E-24 T 11-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_18745 a30dc2416790cf587bbeb399070eaf8f 278 Gene3D G3DSA:3.30.1330.60 122 267 8.7E-24 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL543_18745 a30dc2416790cf587bbeb399070eaf8f 278 PRINTS PR01021 OMPA domain signature 159 181 5.7E-8 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL543_18745 a30dc2416790cf587bbeb399070eaf8f 278 PRINTS PR01021 OMPA domain signature 189 204 5.7E-8 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL543_18745 a30dc2416790cf587bbeb399070eaf8f 278 PRINTS PR01021 OMPA domain signature 204 220 5.7E-8 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL543_18745 a30dc2416790cf587bbeb399070eaf8f 278 SUPERFAMILY SSF103088 147 259 3.92E-26 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL543_18745 a30dc2416790cf587bbeb399070eaf8f 278 Pfam PF00691 OmpA family 159 253 4.2E-19 T 11-10-2018 IPR006665 OmpA-like domain AL543_09170 7a84508b8ce534566f7faf516c690628 276 SUPERFAMILY SSF52980 10 171 1.5E-49 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AL543_09170 7a84508b8ce534566f7faf516c690628 276 Pfam PF08722 TnsA endonuclease N terminal 74 167 1.7E-20 T 11-10-2018 IPR014833 TnsA endonuclease, N-terminal AL543_09170 7a84508b8ce534566f7faf516c690628 276 Gene3D G3DSA:3.40.1350.10 9 172 1.7E-51 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 AL543_17310 090a283895522b60091c2a805beb1092 124 Pfam PF13671 AAA domain 5 103 6.0E-15 T 11-10-2018 AL543_17310 090a283895522b60091c2a805beb1092 124 Gene3D G3DSA:3.40.50.300 3 124 6.5E-27 T 11-10-2018 AL543_17310 090a283895522b60091c2a805beb1092 124 SUPERFAMILY SSF52540 2 123 1.01E-14 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_07550 835101a85aa4862d6236b563c22e3b47 193 SUPERFAMILY SSF158710 32 175 1.44E-51 T 11-10-2018 IPR023153 PSPTO4464-like domain superfamily AL543_07550 835101a85aa4862d6236b563c22e3b47 193 Gene3D G3DSA:1.10.60.30 108 181 2.4E-24 T 11-10-2018 AL543_07550 835101a85aa4862d6236b563c22e3b47 193 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 12 176 23.401 T 11-10-2018 IPR006839 Ribosome-associated, YjgA AL543_07550 835101a85aa4862d6236b563c22e3b47 193 Gene3D G3DSA:1.10.60.30 32 106 2.1E-27 T 11-10-2018 AL543_07550 835101a85aa4862d6236b563c22e3b47 193 PIRSF PIRSF016183 4 180 1.5E-71 T 11-10-2018 IPR006839 Ribosome-associated, YjgA AL543_07550 835101a85aa4862d6236b563c22e3b47 193 Pfam PF04751 Protein of unknown function (DUF615) 22 172 2.0E-55 T 11-10-2018 IPR006839 Ribosome-associated, YjgA AL543_08200 c5ceba0b2c17a5b41395593606e332f5 463 TIGRFAM TIGR00797 matE: MATE efflux family protein 34 425 3.4E-58 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL543_08200 c5ceba0b2c17a5b41395593606e332f5 463 PIRSF PIRSF006603 9 460 5.5E-127 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL543_08200 c5ceba0b2c17a5b41395593606e332f5 463 Pfam PF01554 MatE 34 192 9.0E-26 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL543_08200 c5ceba0b2c17a5b41395593606e332f5 463 Pfam PF01554 MatE 257 418 1.3E-19 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL543_15535 4456fa7ec16eb0c102e731b26dae664d 191 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 19 83 2.0E-9 T 11-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 AL543_17425 0df1aa1b850263c92e5ab4b1015c0f97 245 Pfam PF11140 Protein of unknown function (DUF2913) 29 239 4.0E-86 T 11-10-2018 IPR021316 Protein of unknown function DUF2913 AL543_16655 fd0e211ed2cc70ac8555c0bf738014bf 394 SMART SM00897 28 226 2.7E-37 T 11-10-2018 IPR013702 FIST domain, N-terminal AL543_16655 fd0e211ed2cc70ac8555c0bf738014bf 394 SMART SM01204 227 374 1.7E-26 T 11-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AL543_16655 fd0e211ed2cc70ac8555c0bf738014bf 394 Pfam PF08495 FIST N domain 32 225 9.3E-29 T 11-10-2018 IPR013702 FIST domain, N-terminal AL543_16655 fd0e211ed2cc70ac8555c0bf738014bf 394 Pfam PF10442 FIST C domain 227 373 1.2E-15 T 11-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AL543_04520 874c9ba20074ef90e6c6b3acf462ebf8 165 Pfam PF06496 Protein of unknown function (DUF1097) 8 141 3.9E-40 T 11-10-2018 IPR009476 Protein of unknown function DUF1097 AL543_10150 7eb1806eb6398b5c7969e338dce61af3 213 Pfam PF00156 Phosphoribosyl transferase domain 43 161 1.4E-12 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AL543_10150 7eb1806eb6398b5c7969e338dce61af3 213 SUPERFAMILY SSF53271 2 211 7.95E-49 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AL543_10150 7eb1806eb6398b5c7969e338dce61af3 213 Gene3D G3DSA:3.40.50.2020 1 213 1.5E-79 T 11-10-2018 AL543_10150 7eb1806eb6398b5c7969e338dce61af3 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 35.827 T 11-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL543_10150 7eb1806eb6398b5c7969e338dce61af3 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 4.5E-69 T 11-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL543_14445 b008d99e2892a2571fa142cc1c97ffa6 100 SUPERFAMILY SSF46767 2 84 1.1E-24 T 11-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 AL543_14445 b008d99e2892a2571fa142cc1c97ffa6 100 Gene3D G3DSA:1.10.10.10 1 100 8.6E-38 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_14445 b008d99e2892a2571fa142cc1c97ffa6 100 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 4 83 1.6E-22 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AL543_09730 2adeddf30b38fd31cd8c09dea73fdd74 481 Pfam PF02386 Cation transport protein 53 475 1.9E-48 T 11-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 AL543_09730 2adeddf30b38fd31cd8c09dea73fdd74 481 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 85 464 3.7E-108 T 11-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 AL543_09730 2adeddf30b38fd31cd8c09dea73fdd74 481 PIRSF PIRSF006247 1 481 2.8E-167 T 11-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 AL543_03360 340b1bc9ee0d418ac1d8ae32ec3eaf9b 83 Pfam PF10688 Bacterial inner membrane protein 4 73 9.7E-9 T 11-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV AL543_03360 340b1bc9ee0d418ac1d8ae32ec3eaf9b 83 ProDom PD058023 TRANSMEMBRANE SO1069 MEMBRANE VCA0743 SO4196 VVA0623 VPA0666 HI1736 PM0424 3 73 2.0E-34 T 11-10-2018 IPR020137 Uncharacterised protein family HI1736 AL543_03360 340b1bc9ee0d418ac1d8ae32ec3eaf9b 83 Gene3D G3DSA:1.20.1280.290 26 75 3.3E-6 T 11-10-2018 AL543_02430 847bb8ffb045d82e28f55d4692adf69e 291 Pfam PF00924 Mechanosensitive ion channel 56 185 7.2E-17 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AL543_02430 847bb8ffb045d82e28f55d4692adf69e 291 SUPERFAMILY SSF50182 96 169 3.07E-10 T 11-10-2018 IPR010920 LSM domain superfamily AL543_07635 acb2bcc7dc86d9cf036750e89b35a379 238 SMART SM00382 39 232 5.0E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_07635 acb2bcc7dc86d9cf036750e89b35a379 238 SUPERFAMILY SSF52540 9 228 1.78E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_07635 acb2bcc7dc86d9cf036750e89b35a379 238 Gene3D G3DSA:3.40.50.300 10 230 8.6E-56 T 11-10-2018 AL543_07635 acb2bcc7dc86d9cf036750e89b35a379 238 Pfam PF00005 ABC transporter 32 184 8.3E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_09595 ebc51dda93545bc494a00256e295327f 146 SUPERFAMILY SSF54534 55 128 3.79E-7 T 11-10-2018 AL543_09595 ebc51dda93545bc494a00256e295327f 146 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 56 127 2.4E-5 T 11-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AL543_09595 ebc51dda93545bc494a00256e295327f 146 Gene3D G3DSA:3.10.50.30 50 135 1.3E-9 T 11-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 AL543_16340 d218392eccc3dd75a58551e93f3efbd4 398 SMART SM00487 20 221 2.8E-62 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL543_16340 d218392eccc3dd75a58551e93f3efbd4 398 Gene3D G3DSA:3.40.50.300 1 210 3.6E-76 T 11-10-2018 AL543_16340 d218392eccc3dd75a58551e93f3efbd4 398 SUPERFAMILY SSF52540 73 358 4.33E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_16340 d218392eccc3dd75a58551e93f3efbd4 398 Pfam PF00271 Helicase conserved C-terminal domain 232 337 3.8E-27 T 11-10-2018 IPR001650 Helicase, C-terminal AL543_16340 d218392eccc3dd75a58551e93f3efbd4 398 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AL543_16340 d218392eccc3dd75a58551e93f3efbd4 398 Pfam PF00270 DEAD/DEAH box helicase 25 195 3.2E-50 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL543_16340 d218392eccc3dd75a58551e93f3efbd4 398 SMART SM00490 257 338 1.1E-28 T 11-10-2018 IPR001650 Helicase, C-terminal AL543_16340 d218392eccc3dd75a58551e93f3efbd4 398 Gene3D G3DSA:3.40.50.300 212 374 1.3E-43 T 11-10-2018 AL543_08345 2509d765bb7451ca40e8929d15f3e601 88 Pfam PF13937 Domain of unknown function (DUF4212) 9 85 2.5E-34 T 11-10-2018 IPR019886 Sodium symporter small subunit, predicted AL543_08345 2509d765bb7451ca40e8929d15f3e601 88 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 11 87 4.7E-35 T 11-10-2018 IPR019886 Sodium symporter small subunit, predicted AL543_07460 3a04f8035f31e44df44fc6a6777f5481 213 PIRSF PIRSF004649 1 212 1.1E-56 T 11-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC AL543_07460 3a04f8035f31e44df44fc6a6777f5481 213 Gene3D G3DSA:3.10.450.710 26 205 9.3E-41 T 11-10-2018 AL543_07460 3a04f8035f31e44df44fc6a6777f5481 213 Pfam PF05494 MlaC protein 35 199 5.0E-48 T 11-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC AL543_14905 b06fe135ab52609477cd8cb8bd58bd69 425 SUPERFAMILY SSF51905 1 412 4.75E-50 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_14905 b06fe135ab52609477cd8cb8bd58bd69 425 Pfam PF01593 Flavin containing amine oxidoreductase 10 302 1.9E-19 T 11-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 AL543_14905 b06fe135ab52609477cd8cb8bd58bd69 425 Gene3D G3DSA:3.50.50.60 1 324 2.2E-22 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL543_10330 8ad1ddd7867a692c71e5bf721c1b3b39 371 Pfam PF04230 Polysaccharide pyruvyl transferase 13 308 5.1E-30 T 11-10-2018 IPR007345 Polysaccharide pyruvyl transferase AL543_08115 a9a5ad21f5bc2c527ef2591796af20e6 324 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 1 324 53.205 T 11-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 AL543_08115 a9a5ad21f5bc2c527ef2591796af20e6 324 SUPERFAMILY SSF55681 10 322 8.16E-83 T 11-10-2018 AL543_08115 a9a5ad21f5bc2c527ef2591796af20e6 324 Gene3D G3DSA:3.30.930.10 1 324 1.3E-108 T 11-10-2018 AL543_08115 a9a5ad21f5bc2c527ef2591796af20e6 324 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 15 319 2.4E-127 T 11-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 AL543_08115 a9a5ad21f5bc2c527ef2591796af20e6 324 Pfam PF00152 tRNA synthetases class II (D, K and N) 13 320 1.6E-43 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL543_08115 a9a5ad21f5bc2c527ef2591796af20e6 324 PRINTS PR00982 Lysyl-tRNA synthetase signature 98 115 7.3E-5 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AL543_08115 a9a5ad21f5bc2c527ef2591796af20e6 324 PRINTS PR00982 Lysyl-tRNA synthetase signature 30 40 7.3E-5 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AL543_15465 2677f0dbd948901683636f0a13840e19 291 Pfam PF03547 Membrane transport protein 144 284 9.0E-13 T 11-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 AL543_16410 73ef3cb46ed42761b8d370f2fd509355 175 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 25 153 7.4E-20 T 11-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ AL543_07735 b8285af33c11f9454201b74e292b93cf 118 Gene3D G3DSA:4.10.910.10 72 118 1.3E-26 T 11-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07735 b8285af33c11f9454201b74e292b93cf 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 11-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07735 b8285af33c11f9454201b74e292b93cf 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 6.2E-32 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07735 b8285af33c11f9454201b74e292b93cf 118 Gene3D G3DSA:1.10.8.50 1 71 7.9E-27 T 11-10-2018 AL543_07735 b8285af33c11f9454201b74e292b93cf 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 26.862 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07735 b8285af33c11f9454201b74e292b93cf 118 PIRSF PIRSF002134 1 118 7.4E-41 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07735 b8285af33c11f9454201b74e292b93cf 118 SUPERFAMILY SSF46946 2 114 1.23E-44 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AL543_07735 b8285af33c11f9454201b74e292b93cf 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 7.5E-53 T 11-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL543_21255 ec290250ea0067db2ba9cc41ffec8875 77 Pfam PF12493 Protein of unknown function (DUF3709) 34 66 7.3E-21 T 11-10-2018 IPR022178 Protein of unknown function DUF3709 AL543_21320 ec290250ea0067db2ba9cc41ffec8875 77 Pfam PF12493 Protein of unknown function (DUF3709) 34 66 7.3E-21 T 11-10-2018 IPR022178 Protein of unknown function DUF3709 AL543_21215 ec290250ea0067db2ba9cc41ffec8875 77 Pfam PF12493 Protein of unknown function (DUF3709) 34 66 7.3E-21 T 11-10-2018 IPR022178 Protein of unknown function DUF3709 AL543_16820 33bf36707f062bc5ee5dd8f0d58de020 406 Gene3D G3DSA:1.10.3430.10 2 406 4.5E-103 T 11-10-2018 IPR029020 Ammonium/urea transporter AL543_16820 33bf36707f062bc5ee5dd8f0d58de020 406 Pfam PF00909 Ammonium Transporter Family 23 401 2.9E-91 T 11-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 AL543_16820 33bf36707f062bc5ee5dd8f0d58de020 406 ProSitePatterns PS01219 Ammonium transporters signature. 167 192 - T 11-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 AL543_16820 33bf36707f062bc5ee5dd8f0d58de020 406 SUPERFAMILY SSF111352 17 384 7.19E-97 T 11-10-2018 AL543_21195 77da9bedd031ad2b51c79e04c4e09d58 63 Pfam PF11665 Protein of unknown function (DUF3265) 37 63 4.3E-7 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL543_18950 0db105a9ee3398a3004ce204a03bdea2 230 Pfam PF01066 CDP-alcohol phosphatidyltransferase 35 105 1.2E-8 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AL543_18950 0db105a9ee3398a3004ce204a03bdea2 230 Gene3D G3DSA:1.20.120.1760 16 218 7.3E-28 T 11-10-2018 AL543_03730 710f55ce0f7e4952d8d2156fc634459c 344 SUPERFAMILY SSF53850 25 336 4.55E-68 T 11-10-2018 AL543_03730 710f55ce0f7e4952d8d2156fc634459c 344 Gene3D G3DSA:3.40.190.10 134 321 5.9E-117 T 11-10-2018 AL543_03730 710f55ce0f7e4952d8d2156fc634459c 344 Gene3D G3DSA:3.40.190.10 32 307 5.9E-117 T 11-10-2018 AL543_03730 710f55ce0f7e4952d8d2156fc634459c 344 Pfam PF13343 Bacterial extracellular solute-binding protein 89 319 3.9E-31 T 11-10-2018 AL543_03730 710f55ce0f7e4952d8d2156fc634459c 344 PIRSF PIRSF002825 4 341 6.5E-66 T 11-10-2018 IPR026045 Ferric binding protein AL543_01225 47917404b5a1bd3b333534ee153ac70f 89 Pfam PF13466 STAS domain 4 80 3.9E-14 T 11-10-2018 IPR002645 STAS domain AL543_01225 47917404b5a1bd3b333534ee153ac70f 89 SUPERFAMILY SSF52091 2 84 8.24E-13 T 11-10-2018 IPR036513 STAS domain superfamily AL543_01225 47917404b5a1bd3b333534ee153ac70f 89 Gene3D G3DSA:3.30.750.24 1 89 8.2E-10 T 11-10-2018 IPR036513 STAS domain superfamily AL543_06640 b1fc67ca52bbc0c6eb10b60cd627920b 155 PIRSF PIRSF028680 2 155 1.6E-61 T 11-10-2018 IPR016895 Uncharacterised conserved protein UCP028680 AL543_15555 d34ba82e2eb26b22fbd5ccbcc543d651 298 Pfam PF13084 Domain of unknown function (DUF3943) 135 244 8.2E-38 T 11-10-2018 IPR025079 Domain of unknown function DUF3943 AL543_19410 8dd5d53a63304f68c92d1209ce37ce8e 193 SUPERFAMILY SSF52972 1 186 1.31E-56 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AL543_19410 8dd5d53a63304f68c92d1209ce37ce8e 193 PIRSF PIRSF006305 1 193 9.0E-45 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 AL543_19410 8dd5d53a63304f68c92d1209ce37ce8e 193 TIGRFAM TIGR00172 maf: septum formation protein Maf 4 185 2.7E-51 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 AL543_19410 8dd5d53a63304f68c92d1209ce37ce8e 193 Gene3D G3DSA:3.90.950.10 5 193 6.4E-58 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AL543_19410 8dd5d53a63304f68c92d1209ce37ce8e 193 Hamap MF_00528 Septum formation protein Maf [maf]. 5 192 30.166 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 AL543_19410 8dd5d53a63304f68c92d1209ce37ce8e 193 Pfam PF02545 Maf-like protein 5 187 4.8E-45 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 AL543_02415 56333eeccc8ebf216ab8de5b8c24949a 217 Gene3D G3DSA:3.40.30.10 1 210 4.1E-64 T 11-10-2018 AL543_02415 56333eeccc8ebf216ab8de5b8c24949a 217 SUPERFAMILY SSF52833 3 209 1.34E-48 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL543_02415 56333eeccc8ebf216ab8de5b8c24949a 217 Pfam PF01323 DSBA-like thioredoxin domain 5 205 2.3E-34 T 11-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 AL543_08315 ac68970401a1ff41f8d2cbecb0a04450 161 Pfam PF04186 FxsA cytoplasmic membrane protein 8 113 5.4E-35 T 11-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 AL543_20720 0de0ea09414af3cdd6bc50e043907d1e 44 Pfam PF04875 Protein of unknown function, DUF645 1 44 4.3E-28 T 11-10-2018 IPR006959 Protein of unknown function DUF645 AL543_06530 ce8d980c5746d1544c267459c4c557e3 786 Gene3D G3DSA:2.40.10.220 465 586 3.6E-5 T 11-10-2018 AL543_06530 ce8d980c5746d1544c267459c4c557e3 786 Pfam PF07238 PilZ domain 469 551 3.0E-10 T 11-10-2018 IPR009875 PilZ domain GO:0035438 AL543_06530 ce8d980c5746d1544c267459c4c557e3 786 Pfam PF07238 PilZ domain 144 228 4.4E-7 T 11-10-2018 IPR009875 PilZ domain GO:0035438 AL543_06530 ce8d980c5746d1544c267459c4c557e3 786 SUPERFAMILY SSF141371 464 545 3.34E-7 T 11-10-2018 AL543_17400 b72a14c7f82fa2dbdd5726ba0ca7e9ef 371 Gene3D G3DSA:2.40.370.10 249 371 3.0E-14 T 11-10-2018 IPR023374 AttH-like domain superfamily AL543_17400 b72a14c7f82fa2dbdd5726ba0ca7e9ef 371 Gene3D G3DSA:2.40.370.10 62 248 1.9E-45 T 11-10-2018 IPR023374 AttH-like domain superfamily AL543_17400 b72a14c7f82fa2dbdd5726ba0ca7e9ef 371 Pfam PF07143 CrtC N-terminal lipocalin domain 75 245 1.4E-40 T 11-10-2018 IPR010791 AttH domain AL543_17400 b72a14c7f82fa2dbdd5726ba0ca7e9ef 371 Pfam PF17186 Lipocalin-like domain 249 371 7.2E-28 T 11-10-2018 AL543_17400 b72a14c7f82fa2dbdd5726ba0ca7e9ef 371 SUPERFAMILY SSF159245 51 371 2.75E-84 T 11-10-2018 AL543_16060 5e13ae457ecde8ec6a06dd46080fe136 158 Gene3D G3DSA:3.40.630.30 7 137 5.9E-34 T 11-10-2018 AL543_16060 5e13ae457ecde8ec6a06dd46080fe136 158 Pfam PF00583 Acetyltransferase (GNAT) family 27 146 1.2E-17 T 11-10-2018 IPR000182 GNAT domain AL543_16060 5e13ae457ecde8ec6a06dd46080fe136 158 SUPERFAMILY SSF55729 4 148 2.13E-27 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL543_02285 46f2c1304a106645b347d7b55cc7404a 418 Pfam PF03611 PTS system sugar-specific permease component 11 405 9.0E-144 T 11-10-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 AL543_07495 1c2cff8405ef1b205a7fc498284b784e 185 Pfam PF08282 haloacid dehalogenase-like hydrolase 92 155 3.3E-8 T 11-10-2018 AL543_07495 1c2cff8405ef1b205a7fc498284b784e 185 SUPERFAMILY SSF56784 21 178 4.8E-40 T 11-10-2018 IPR036412 HAD-like superfamily AL543_07495 1c2cff8405ef1b205a7fc498284b784e 185 Gene3D G3DSA:3.40.50.1000 1 177 2.7E-59 T 11-10-2018 IPR023214 HAD superfamily AL543_07495 1c2cff8405ef1b205a7fc498284b784e 185 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 23 175 1.5E-62 T 11-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AL543_07495 1c2cff8405ef1b205a7fc498284b784e 185 PIRSF PIRSF006118 10 185 4.0E-74 T 11-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AL543_02395 7ae362bb6e44c7b2fbd126d2cc55ce41 310 SUPERFAMILY SSF53300 90 232 7.12E-6 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AL543_02395 7ae362bb6e44c7b2fbd126d2cc55ce41 310 Pfam PF01882 Protein of unknown function DUF58 54 138 5.2E-24 T 11-10-2018 IPR002881 Domain of unknown function DUF58 AL543_13295 cdafc58ceaace2eafe2bd2b3c865d3c0 244 Gene3D G3DSA:3.30.1330.30 1 94 1.7E-17 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like AL543_13295 cdafc58ceaace2eafe2bd2b3c865d3c0 244 SUPERFAMILY SSF75217 97 243 9.81E-34 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AL543_13295 cdafc58ceaace2eafe2bd2b3c865d3c0 244 Gene3D G3DSA:3.40.1280.10 96 244 1.6E-40 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL543_13295 cdafc58ceaace2eafe2bd2b3c865d3c0 244 SUPERFAMILY SSF55315 5 92 8.0E-13 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like AL543_13295 cdafc58ceaace2eafe2bd2b3c865d3c0 244 Pfam PF00588 SpoU rRNA Methylase family 102 236 2.6E-29 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AL543_07795 506aca06406bb5a23accfbeabd9dcebe 123 SUPERFAMILY SSF50193 2 122 6.67E-52 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 AL543_07795 506aca06406bb5a23accfbeabd9dcebe 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 11-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07795 506aca06406bb5a23accfbeabd9dcebe 123 Gene3D G3DSA:2.40.150.20 1 123 6.3E-57 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 AL543_07795 506aca06406bb5a23accfbeabd9dcebe 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 27.738 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AL543_07795 506aca06406bb5a23accfbeabd9dcebe 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 8.6E-59 T 11-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 AL543_07795 506aca06406bb5a23accfbeabd9dcebe 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 2.3E-55 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AL543_07795 506aca06406bb5a23accfbeabd9dcebe 123 SMART SM01374 1 123 2.8E-86 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AL543_03705 eb20fae106d9125eb1d91a58e1aba384 202 Pfam PF16964 Putative tight adherence pilin protein F 8 183 5.9E-30 T 11-10-2018 IPR031582 Putative tight adherence pilin protein F AL543_06390 7fe3bdef9b5b67ac0dd58a080a5b5d2c 138 Pfam PF11012 Protein of unknown function (DUF2850) 52 129 4.0E-29 T 11-10-2018 IPR021271 Protein of unknown function DUF2850 AL543_06305 800a6dd5eae73c15a326882788c4f25f 415 PIRSF PIRSF016055 1 414 8.9E-201 T 11-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 AL543_06305 800a6dd5eae73c15a326882788c4f25f 415 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 412 36.502 T 11-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 AL543_06305 800a6dd5eae73c15a326882788c4f25f 415 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 408 1.4E-200 T 11-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 AL543_06305 800a6dd5eae73c15a326882788c4f25f 415 Pfam PF03116 NQR2, RnfD, RnfE family 41 406 1.6E-107 T 11-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 AL543_17105 8d61f6038b34011312eb026cf3475e4e 233 Gene3D G3DSA:3.40.50.300 7 233 3.3E-72 T 11-10-2018 AL543_17105 8d61f6038b34011312eb026cf3475e4e 233 SUPERFAMILY SSF52540 9 230 4.79E-75 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_17105 8d61f6038b34011312eb026cf3475e4e 233 SMART SM00382 38 224 2.7E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_17105 8d61f6038b34011312eb026cf3475e4e 233 Pfam PF00005 ABC transporter 29 177 1.9E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_17105 8d61f6038b34011312eb026cf3475e4e 233 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_08185 832589330ad335e574109897d54f8662 146 Pfam PF05656 Protein of unknown function (DUF805) 8 140 1.4E-21 T 11-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 AL543_14535 e7a4816a0e8e3a5a5f4eac6d53347a1f 241 TIGRFAM TIGR03950 sidero_Fe_reduc: siderophore ferric iron reductase, AHA_1954 family 10 235 6.0E-91 T 11-10-2018 IPR023998 Siderophore ferric iron reductase, AHA1954 family AL543_11300 255a50768f1df79261f4a698acab6b9e 123 SUPERFAMILY SSF55298 11 119 1.08E-29 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AL543_11300 255a50768f1df79261f4a698acab6b9e 123 Pfam PF01042 Endoribonuclease L-PSP 13 116 1.1E-21 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 AL543_11300 255a50768f1df79261f4a698acab6b9e 123 Gene3D G3DSA:3.30.1330.40 10 122 1.6E-30 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AL543_02915 858b7f33b49c70530db57dddf9e6b71c 273 ProSitePatterns PS01229 Hypothetical cof family signature 2. 220 242 - T 11-10-2018 AL543_02915 858b7f33b49c70530db57dddf9e6b71c 273 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 267 1.8E-54 T 11-10-2018 IPR000150 Cof family GO:0016787 AL543_02915 858b7f33b49c70530db57dddf9e6b71c 273 SUPERFAMILY SSF56784 1 271 2.01E-62 T 11-10-2018 IPR036412 HAD-like superfamily AL543_02915 858b7f33b49c70530db57dddf9e6b71c 273 Gene3D G3DSA:3.30.1240.10 82 195 1.5E-58 T 11-10-2018 AL543_02915 858b7f33b49c70530db57dddf9e6b71c 273 Gene3D G3DSA:3.40.50.1000 3 267 1.5E-58 T 11-10-2018 IPR023214 HAD superfamily AL543_02915 858b7f33b49c70530db57dddf9e6b71c 273 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 11-10-2018 AL543_02915 858b7f33b49c70530db57dddf9e6b71c 273 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 239 1.6E-18 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AL543_02915 858b7f33b49c70530db57dddf9e6b71c 273 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 267 2.4E-61 T 11-10-2018 AL543_18355 65112fc20ffa17313cf15988e86d595f 173 Gene3D G3DSA:3.30.420.10 2 159 1.5E-51 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AL543_18355 65112fc20ffa17313cf15988e86d595f 173 SUPERFAMILY SSF53098 3 156 2.58E-55 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_18355 65112fc20ffa17313cf15988e86d595f 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 47.553 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AL543_18355 65112fc20ffa17313cf15988e86d595f 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 2.8E-42 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AL543_18355 65112fc20ffa17313cf15988e86d595f 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 2.8E-42 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AL543_18355 65112fc20ffa17313cf15988e86d595f 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 2.8E-42 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AL543_18355 65112fc20ffa17313cf15988e86d595f 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 2.8E-42 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AL543_18355 65112fc20ffa17313cf15988e86d595f 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 2.8E-42 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AL543_18355 65112fc20ffa17313cf15988e86d595f 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 155 2.5E-74 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AL543_18355 65112fc20ffa17313cf15988e86d595f 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 6.1E-62 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AL543_18355 65112fc20ffa17313cf15988e86d595f 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 11-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 AL543_19060 4e662858307b2f998462455578e6aa33 323 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 23 322 1.0E-112 T 11-10-2018 IPR011970 Lytic murein transglycosylase AL543_19060 4e662858307b2f998462455578e6aa33 323 Gene3D G3DSA:1.10.530.10 66 318 2.6E-93 T 11-10-2018 AL543_19060 4e662858307b2f998462455578e6aa33 323 Gene3D G3DSA:1.10.8.350 33 199 2.6E-93 T 11-10-2018 AL543_19060 4e662858307b2f998462455578e6aa33 323 SUPERFAMILY SSF53955 8 322 3.28E-102 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AL543_19060 4e662858307b2f998462455578e6aa33 323 Pfam PF13406 Transglycosylase SLT domain 23 319 2.9E-110 T 11-10-2018 IPR031304 Transglycosylase SLT domain 2 AL543_18220 c6176e3d40f3e679ab0c1c4a77f598b8 901 Pfam PF07971 Glycosyl hydrolase family 92 286 891 2.3E-139 T 11-10-2018 IPR012939 Glycosyl hydrolase family 92 AL543_18220 c6176e3d40f3e679ab0c1c4a77f598b8 901 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 5 596 1.1E-90 T 11-10-2018 IPR005887 Alpha-1,2-mannosidase, putative AL543_18220 c6176e3d40f3e679ab0c1c4a77f598b8 901 SUPERFAMILY SSF48208 316 874 3.57E-26 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AL543_18090 3dce39378d1ba1d80db5e242af91ff9f 161 Pfam PF07811 TadE-like protein 3 45 1.9E-8 T 11-10-2018 IPR012495 TadE-like AL543_08035 686a5c9f63f5b7662f80061b2986eaa1 835 Gene3D G3DSA:1.10.3810.10 58 255 1.3E-77 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL543_08035 686a5c9f63f5b7662f80061b2986eaa1 835 SUPERFAMILY SSF53955 53 266 1.52E-77 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AL543_08035 686a5c9f63f5b7662f80061b2986eaa1 835 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 75 767 1.1E-168 T 11-10-2018 AL543_08035 686a5c9f63f5b7662f80061b2986eaa1 835 Gene3D G3DSA:2.40.50.140 331 433 7.3E-32 T 11-10-2018 AL543_08035 686a5c9f63f5b7662f80061b2986eaa1 835 Pfam PF00912 Transglycosylase 65 239 1.7E-62 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL543_08035 686a5c9f63f5b7662f80061b2986eaa1 835 Pfam PF17092 Penicillin-binding protein OB-like domain 327 441 5.4E-31 T 11-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL543_08035 686a5c9f63f5b7662f80061b2986eaa1 835 SUPERFAMILY SSF56601 221 821 6.52E-115 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AL543_08035 686a5c9f63f5b7662f80061b2986eaa1 835 Gene3D G3DSA:3.40.710.10 434 810 1.2E-93 T 11-10-2018 AL543_08035 686a5c9f63f5b7662f80061b2986eaa1 835 Pfam PF00905 Penicillin binding protein transpeptidase domain 444 706 2.1E-27 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AL543_08035 686a5c9f63f5b7662f80061b2986eaa1 835 Gene3D G3DSA:3.40.710.10 260 330 4.0E-8 T 11-10-2018 AL543_03085 019fa788bfc6ad2c26edcda5729d721f 226 SUPERFAMILY SSF56784 6 217 4.69E-42 T 11-10-2018 IPR036412 HAD-like superfamily AL543_03085 019fa788bfc6ad2c26edcda5729d721f 226 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 187 7.7E-26 T 11-10-2018 AL543_03085 019fa788bfc6ad2c26edcda5729d721f 226 Gene3D G3DSA:3.40.50.1000 9 190 7.0E-42 T 11-10-2018 IPR023214 HAD superfamily AL543_03085 019fa788bfc6ad2c26edcda5729d721f 226 Gene3D G3DSA:1.10.150.240 21 88 7.0E-42 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AL543_03085 019fa788bfc6ad2c26edcda5729d721f 226 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 78 188 4.7E-12 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL543_03085 019fa788bfc6ad2c26edcda5729d721f 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 6 17 9.1E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL543_03085 019fa788bfc6ad2c26edcda5729d721f 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 152 172 9.1E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL543_03085 019fa788bfc6ad2c26edcda5729d721f 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 134 150 9.1E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL543_03085 019fa788bfc6ad2c26edcda5729d721f 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 102 115 9.1E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL543_00895 56babe299a683fa3ff28872db2afd993 133 Pfam PF04519 Polymer-forming cytoskeletal 18 113 5.9E-23 T 11-10-2018 IPR007607 Bactofilin A/B AL543_16780 42703454421e0c6f24a3467480d366e8 878 Pfam PF02470 MlaD protein 47 138 6.5E-12 T 11-10-2018 IPR003399 Mce/MlaD AL543_16780 42703454421e0c6f24a3467480d366e8 878 Pfam PF02470 MlaD protein 747 816 2.1E-8 T 11-10-2018 IPR003399 Mce/MlaD AL543_16780 42703454421e0c6f24a3467480d366e8 878 Pfam PF02470 MlaD protein 398 462 5.0E-9 T 11-10-2018 IPR003399 Mce/MlaD AL543_16780 42703454421e0c6f24a3467480d366e8 878 Pfam PF02470 MlaD protein 640 704 1.1E-5 T 11-10-2018 IPR003399 Mce/MlaD AL543_16780 42703454421e0c6f24a3467480d366e8 878 Pfam PF02470 MlaD protein 287 374 1.3E-8 T 11-10-2018 IPR003399 Mce/MlaD AL543_16780 42703454421e0c6f24a3467480d366e8 878 Pfam PF02470 MlaD protein 164 224 1.3E-7 T 11-10-2018 IPR003399 Mce/MlaD AL543_16835 175e74c94c658c68c348197922d07ffe 357 Pfam PF01292 Prokaryotic cytochrome b561 128 309 6.8E-27 T 11-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AL543_16835 175e74c94c658c68c348197922d07ffe 357 SUPERFAMILY SSF81342 122 336 1.49E-45 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AL543_16835 175e74c94c658c68c348197922d07ffe 357 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 125 330 2.3E-87 T 11-10-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 AL543_16835 175e74c94c658c68c348197922d07ffe 357 Gene3D G3DSA:1.20.950.20 121 338 1.1E-63 T 11-10-2018 AL543_16010 dfd4ce8876b5fcef4fa2d515fbc2efcd 509 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 18 444 2.1E-140 T 11-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane AL543_15675 19a3f25bb80b750e855ba015883e8446 420 Pfam PF09375 Imelysin 40 398 9.7E-95 T 11-10-2018 IPR018976 Imelysin-like domain AL543_15675 19a3f25bb80b750e855ba015883e8446 420 Gene3D G3DSA:1.20.1420.20 14 401 1.5E-84 T 11-10-2018 IPR038352 Imelysin-like domain superfamily AL543_14920 d1aefb3066d12c801bb264b680fc2140 179 Pfam PF11086 Protein of unknown function (DUF2878) 4 149 1.4E-30 T 11-10-2018 IPR021306 Protein of unknown function DUF2878 AL543_00950 cad4b4e98a6b8cbcc1990a63cc80145c 301 SUPERFAMILY SSF103481 45 139 2.22E-14 T 11-10-2018 AL543_00950 cad4b4e98a6b8cbcc1990a63cc80145c 301 Pfam PF00892 EamA-like transporter family 147 281 2.5E-21 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL543_00950 cad4b4e98a6b8cbcc1990a63cc80145c 301 Pfam PF00892 EamA-like transporter family 8 136 8.1E-16 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL543_00950 cad4b4e98a6b8cbcc1990a63cc80145c 301 SUPERFAMILY SSF103481 182 284 1.31E-14 T 11-10-2018 AL543_08740 f6549840cdbb80475ec7dd64099de6f4 288 Pfam PF14267 Domain of unknown function (DUF4357) 227 280 3.5E-15 T 11-10-2018 IPR025579 Domain of unknown function DUF4357 AL543_00650 8c8b8378b660c7958523216df48afd18 205 SMART SM00702 16 192 8.6E-45 T 11-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 AL543_00650 8c8b8378b660c7958523216df48afd18 205 Gene3D G3DSA:2.60.120.620 5 196 9.5E-55 T 11-10-2018 AL543_00650 8c8b8378b660c7958523216df48afd18 205 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 102 192 6.6E-21 T 11-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 AL543_20380 0986382b32414f037659c2bcacdbb3f8 211 PIRSF PIRSF028688 1 211 3.4E-123 T 11-10-2018 IPR014549 Flagellar protein FlgO AL543_06965 84ec5cc1805282a7f6091dd734b1cc6c 148 Pfam PF06853 Protein of unknown function (DUF1249) 27 139 1.5E-41 T 11-10-2018 IPR009659 Protein of unknown function DUF1249 AL543_05255 2b3f14467ae50a1cb98003c59e1bc6ef 132 SUPERFAMILY SSF54593 5 129 1.32E-26 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL543_05255 2b3f14467ae50a1cb98003c59e1bc6ef 132 Gene3D G3DSA:3.10.180.10 11 132 1.3E-40 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL543_05255 2b3f14467ae50a1cb98003c59e1bc6ef 132 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 10 126 2.8E-12 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL543_19405 3eb4190d6b48152c2c7b2433fd3462d2 174 Pfam PF02620 Uncharacterized ACR, COG1399 62 173 2.4E-17 T 11-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD AL543_01845 9007f9f707bd8a8f90daa4841d76daa5 160 PIRSF PIRSF028065 1 160 4.3E-59 T 11-10-2018 IPR016865 Inner membrane protein RclC AL543_01845 9007f9f707bd8a8f90daa4841d76daa5 160 Pfam PF04224 Protein of unknown function, DUF417 17 155 1.1E-25 T 11-10-2018 IPR007339 Inner membrane protein RclC-like AL543_20740 6fc96b053f4613d15eeaec351f421eab 43 Pfam PF11665 Protein of unknown function (DUF3265) 16 43 8.0E-14 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL543_11145 e29831d9eadacd54f5323e878630e422 216 Pfam PF04612 Type II secretion system (T2SS), protein M 8 83 8.9E-9 T 11-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 AL543_20370 d7db8c377da158395a55301efe7cc015 143 Pfam PF05130 FlgN protein 4 133 7.0E-26 T 11-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 AL543_20370 d7db8c377da158395a55301efe7cc015 143 Gene3D G3DSA:1.20.58.300 2 115 2.8E-8 T 11-10-2018 AL543_20370 d7db8c377da158395a55301efe7cc015 143 SUPERFAMILY SSF140566 3 115 3.01E-22 T 11-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 AL543_13510 3dfff8e32809a3aa26587a6640ff1af8 231 Gene3D G3DSA:3.30.2310.10 140 227 4.4E-20 T 11-10-2018 AL543_13510 3dfff8e32809a3aa26587a6640ff1af8 231 ProSitePatterns PS01318 TsaA-like domain signature. 85 96 - T 11-10-2018 IPR023368 Uncharacterised protein family UPF0066, conserved site AL543_13510 3dfff8e32809a3aa26587a6640ff1af8 231 Pfam PF01980 Uncharacterised protein family UPF0066 19 141 6.6E-38 T 11-10-2018 IPR023370 YaeB-like, N-terminal domain AL543_13510 3dfff8e32809a3aa26587a6640ff1af8 231 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 2 147 2.1E-47 T 11-10-2018 IPR023370 YaeB-like, N-terminal domain AL543_13510 3dfff8e32809a3aa26587a6640ff1af8 231 SUPERFAMILY SSF118196 1 225 6.41E-77 T 11-10-2018 IPR036413 YaeB-like superfamily AL543_13510 3dfff8e32809a3aa26587a6640ff1af8 231 Gene3D G3DSA:2.40.30.70 2 139 1.0E-39 T 11-10-2018 IPR036414 YaeB, N-terminal domain superfamily AL543_20140 ea01efa6c08b86933b024f3244ede908 270 Gene3D G3DSA:1.25.40.10 181 267 1.8E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_20140 ea01efa6c08b86933b024f3244ede908 270 Pfam PF13371 Tetratricopeptide repeat 187 259 2.6E-23 T 11-10-2018 AL543_20140 ea01efa6c08b86933b024f3244ede908 270 Pfam PF13369 Transglutaminase-like superfamily 34 184 6.9E-44 T 11-10-2018 IPR032698 Protein SirB1, N-terminal Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AL543_20140 ea01efa6c08b86933b024f3244ede908 270 SUPERFAMILY SSF48452 190 257 3.5E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_02130 0eae97e9890ad8875139a11685b422f5 226 TIGRFAM TIGR03360 VI_minor_1: type VI secretion-associated protein, VC_A0118 family 41 226 3.8E-66 T 11-10-2018 IPR017738 Type VI secretion system-associated, VCA0118 AL543_02130 0eae97e9890ad8875139a11685b422f5 226 Pfam PF11319 Type VI secretion system VasI, EvfG, VC_A0118 44 226 2.1E-55 T 11-10-2018 IPR017738 Type VI secretion system-associated, VCA0118 AL543_18335 593a2d3f20519042bdd33ea13c03d6ea 378 PIRSF PIRSF000267 2 377 8.5E-122 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AL543_18335 593a2d3f20519042bdd33ea13c03d6ea 378 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 378 8.4E-173 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AL543_18335 593a2d3f20519042bdd33ea13c03d6ea 378 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 361 8.5E-106 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AL543_08550 65c5bb04b23ce947cc1778be20668fb9 309 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 16 291 23.488 T 11-10-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial AL543_08550 65c5bb04b23ce947cc1778be20668fb9 309 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 18 275 1.7E-80 T 11-10-2018 IPR017039 Virulence factor BrkB AL543_08550 65c5bb04b23ce947cc1778be20668fb9 309 Pfam PF03631 Virulence factor BrkB 28 276 2.0E-59 T 11-10-2018 IPR017039 Virulence factor BrkB AL543_08550 65c5bb04b23ce947cc1778be20668fb9 309 PIRSF PIRSF035875 2 295 8.0E-54 T 11-10-2018 IPR017039 Virulence factor BrkB AL543_13695 e5c867b3d12973b0ac9f5bc82cb5ae23 254 Gene3D G3DSA:2.60.40.10 31 131 3.7E-18 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL543_00490 65d60373cd9c488c808c9ff337218fbd 372 Pfam PF01553 Acyltransferase 96 198 2.2E-8 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AL543_00490 65d60373cd9c488c808c9ff337218fbd 372 SUPERFAMILY SSF69593 95 217 6.67E-8 T 11-10-2018 AL543_13040 7938798478d0bbc8ebf782d75f62ce77 77 ProDom PD060428 YFGJ CYTOPLASMIC VP0614 ECS3372 VC0765 YPO2873 Y1359 STY2763A VV0773 5 68 4.0E-27 T 11-10-2018 IPR010807 Protein of unknown function DUF1407 AL543_13040 7938798478d0bbc8ebf782d75f62ce77 77 Gene3D G3DSA:2.10.290.10 1 70 5.7E-27 T 11-10-2018 IPR029037 YfgJ-like AL543_13040 7938798478d0bbc8ebf782d75f62ce77 77 Pfam PF07191 zinc-ribbons 4 67 6.6E-26 T 11-10-2018 IPR010807 Protein of unknown function DUF1407 AL543_13040 7938798478d0bbc8ebf782d75f62ce77 77 SUPERFAMILY SSF161187 1 69 3.53E-26 T 11-10-2018 AL543_07355 0348646d8342ac4d5f8e46b4d022ee00 366 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 344 3.8E-70 T 11-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 AL543_07355 0348646d8342ac4d5f8e46b4d022ee00 366 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 346 5.2E-120 T 11-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 AL543_00215 0b5aedae54842302825299b3e71f76d4 103 Pfam PF16083 LydA holin phage, holin superfamily III 18 91 1.4E-23 T 11-10-2018 IPR032126 LydA-like holin AL543_17950 c6eb782bf22e7cfdcde0e4fb0a9f6402 82 Pfam PF10692 Protein of unknown function (DUF2498) 4 80 6.3E-42 T 11-10-2018 IPR019633 Protein of unknown function DUF2498 AL543_17950 c6eb782bf22e7cfdcde0e4fb0a9f6402 82 Gene3D G3DSA:1.10.1900.30 9 76 2.7E-34 T 11-10-2018 IPR038191 YciN superfamily AL543_21300 d8aa16bce062703df572640107825855 77 Pfam PF12493 Protein of unknown function (DUF3709) 34 66 4.1E-21 T 11-10-2018 IPR022178 Protein of unknown function DUF3709 AL543_20945 d8aa16bce062703df572640107825855 77 Pfam PF12493 Protein of unknown function (DUF3709) 34 66 4.1E-21 T 11-10-2018 IPR022178 Protein of unknown function DUF3709 AL543_19570 054ba2b5682b9b4e3f10c36fe13dab53 158 Pfam PF03918 Cytochrome C biogenesis protein 9 150 7.5E-56 T 11-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family AL543_19570 054ba2b5682b9b4e3f10c36fe13dab53 158 Gene3D G3DSA:1.10.8.640 20 104 1.0E-36 T 11-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily AL543_09505 d54489ade848ce71cb9f78d66f1553ea 257 Gene3D G3DSA:3.40.50.300 1 255 1.9E-77 T 11-10-2018 AL543_09505 d54489ade848ce71cb9f78d66f1553ea 257 SUPERFAMILY SSF52540 2 253 4.37E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_09505 d54489ade848ce71cb9f78d66f1553ea 257 Pfam PF13614 AAA domain 2 178 1.9E-62 T 11-10-2018 IPR025669 AAA domain AL543_09505 d54489ade848ce71cb9f78d66f1553ea 257 PIRSF PIRSF009320 86 253 4.4E-9 T 11-10-2018 AL543_09505 d54489ade848ce71cb9f78d66f1553ea 257 PIRSF PIRSF009320 2 89 3.0E-13 T 11-10-2018 AL543_00935 7bf1897f259301e509870423cea7ae42 143 Pfam PF03733 Inner membrane component domain 77 127 1.4E-18 T 11-10-2018 IPR005185 Inner membrane component domain AL543_00935 7bf1897f259301e509870423cea7ae42 143 Pfam PF03733 Inner membrane component domain 5 54 3.4E-15 T 11-10-2018 IPR005185 Inner membrane component domain AL543_00935 7bf1897f259301e509870423cea7ae42 143 PIRSF PIRSF028777 2 139 1.4E-53 T 11-10-2018 IPR031308 Uncharacterised conserved protein UCP028777 AL543_06650 591e3e41574d55ed6a36f9dc6d2a0fde 129 Pfam PF11697 Protein of unknown function (DUF3293) 31 100 1.2E-18 T 11-10-2018 IPR021710 Protein of unknown function DUF3293 AL543_09260 ce7d4e457c184b9163ce04bc2781c1b4 255 Pfam PF00899 ThiF family 10 242 1.7E-56 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AL543_09260 ce7d4e457c184b9163ce04bc2781c1b4 255 SUPERFAMILY SSF69572 2 245 3.4E-75 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 AL543_09260 ce7d4e457c184b9163ce04bc2781c1b4 255 Gene3D G3DSA:3.40.50.720 2 251 7.9E-83 T 11-10-2018 AL543_01290 3657839923fb3b9a5801e95d94f44e60 200 Pfam PF12261 Thermostable hemolysin 16 186 1.3E-59 T 11-10-2018 IPR022050 Thermostable hemolysin AL543_14820 71bbbfc5ba9c8a7cc6cc630ad2da3da4 327 Pfam PF02653 Branched-chain amino acid transport system / permease component 20 278 1.9E-27 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AL543_13460 effc0612b2e5bb608de3bf9694e8b0a8 519 Pfam PF03806 AbgT putative transporter family 19 517 1.5E-218 T 11-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 AL543_16970 8c94dee2efa1173991f2df1ff5a839f4 457 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 422 2.6E-118 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL543_16970 8c94dee2efa1173991f2df1ff5a839f4 457 Pfam PF01554 MatE 17 176 5.3E-37 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL543_16970 8c94dee2efa1173991f2df1ff5a839f4 457 Pfam PF01554 MatE 243 404 7.5E-37 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL543_16970 8c94dee2efa1173991f2df1ff5a839f4 457 PIRSF PIRSF006603 5 455 5.0E-62 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL543_15760 8b7c1182409b77740335c937117edb78 101 Gene3D G3DSA:3.40.50.2300 2 101 5.6E-39 T 11-10-2018 AL543_15760 8b7c1182409b77740335c937117edb78 101 SUPERFAMILY SSF52794 1 101 1.15E-36 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 AL543_15760 8b7c1182409b77740335c937117edb78 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 95 2.2E-24 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL543_09785 7dbea8718d2705f2afd4c389e91850ca 185 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 3 185 2.9E-39 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 AL543_09785 7dbea8718d2705f2afd4c389e91850ca 185 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 1 183 40.081 T 11-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 AL543_09785 7dbea8718d2705f2afd4c389e91850ca 185 Gene3D G3DSA:3.90.870.10 1 183 3.5E-61 T 11-10-2018 AL543_09785 7dbea8718d2705f2afd4c389e91850ca 185 SUPERFAMILY SSF55821 2 178 1.28E-54 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AL543_09785 7dbea8718d2705f2afd4c389e91850ca 185 Pfam PF01300 Telomere recombination 10 185 6.1E-48 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 AL543_16490 9e9ac7a0b0b26530b9b80b54c2f1677b 262 Pfam PF13503 Domain of unknown function (DUF4123) 14 126 4.1E-18 T 11-10-2018 IPR025391 Domain of unknown function DUF4123 AL543_17090 61348b83fbef9bfd44fa917c6e8a317d 420 Gene3D G3DSA:1.20.1600.10 24 420 6.3E-65 T 11-10-2018 AL543_17090 61348b83fbef9bfd44fa917c6e8a317d 420 SUPERFAMILY SSF56954 3 408 1.96E-67 T 11-10-2018 AL543_17090 61348b83fbef9bfd44fa917c6e8a317d 420 Pfam PF02321 Outer membrane efflux protein 26 202 5.1E-25 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AL543_17090 61348b83fbef9bfd44fa917c6e8a317d 420 Pfam PF02321 Outer membrane efflux protein 226 404 2.8E-25 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AL543_20515 28bab4d0d4d8d0942e9841fcac6f988b 419 TIGRFAM TIGR03503 TIGR03503: TIGR03503 family protein 24 401 2.2E-150 T 11-10-2018 IPR020010 Conserved hypothetical protein CHP03503 AL543_02980 471662bf0a27861e7a1eb8937bf2b79e 331 Pfam PF02653 Branched-chain amino acid transport system / permease component 55 320 3.7E-46 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AL543_07820 a06f7175b099c7582a5efb6f7eed1b69 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 1.2E-49 T 11-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_07820 a06f7175b099c7582a5efb6f7eed1b69 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 11-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL543_07820 a06f7175b099c7582a5efb6f7eed1b69 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 29.588 T 11-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL543_07820 a06f7175b099c7582a5efb6f7eed1b69 110 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 5.4E-40 T 11-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 AL543_07820 a06f7175b099c7582a5efb6f7eed1b69 110 Gene3D G3DSA:3.90.470.10 1 110 2.5E-48 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 AL543_07820 a06f7175b099c7582a5efb6f7eed1b69 110 SUPERFAMILY SSF54843 1 109 6.15E-45 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 AL543_00715 f92bc0067411b4fac1c081ab31f9e1d6 203 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 23 199 4.8E-37 T 11-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like AL543_00715 f92bc0067411b4fac1c081ab31f9e1d6 203 SUPERFAMILY SSF51197 12 201 1.65E-66 T 11-10-2018 AL543_00715 f92bc0067411b4fac1c081ab31f9e1d6 203 Gene3D G3DSA:2.60.120.590 13 202 3.7E-68 T 11-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily AL543_17725 753b1ad3e90a436ef1c65eac2cb0ff3a 301 SMART SM01131 178 300 4.0E-34 T 11-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AL543_17725 753b1ad3e90a436ef1c65eac2cb0ff3a 301 SUPERFAMILY SSF64182 1 298 2.22E-66 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily AL543_17725 753b1ad3e90a436ef1c65eac2cb0ff3a 301 Pfam PF01368 DHH family 2 142 2.1E-21 T 11-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AL543_17725 753b1ad3e90a436ef1c65eac2cb0ff3a 301 Gene3D G3DSA:3.10.310.20 187 301 2.6E-22 T 11-10-2018 IPR038222 DHHA2 domain superfamily KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AL543_17725 753b1ad3e90a436ef1c65eac2cb0ff3a 301 Gene3D G3DSA:3.90.1640.10 1 186 2.7E-63 T 11-10-2018 AL543_17725 753b1ad3e90a436ef1c65eac2cb0ff3a 301 Pfam PF02833 DHHA2 domain 180 297 6.8E-15 T 11-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AL543_00445 b4dd43d9bc48ee756e72fe0958695006 138 Pfam PF02472 Biopolymer transport protein ExbD/TolR 16 135 2.0E-19 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 AL543_13790 7ed99c5d8c4b8c75cbbe344d54e3fd82 263 Gene3D G3DSA:2.60.40.3880 151 263 3.0E-44 T 11-10-2018 AL543_13790 7ed99c5d8c4b8c75cbbe344d54e3fd82 263 Gene3D G3DSA:2.60.40.3880 23 150 3.6E-61 T 11-10-2018 AL543_04300 ef92014925921354478ce2868f02fb4f 462 Gene3D G3DSA:3.60.120.10 4 447 5.3E-120 T 11-10-2018 IPR005801 ADC synthase GO:0009058 AL543_04300 ef92014925921354478ce2868f02fb4f 462 SUPERFAMILY SSF56322 11 445 5.89E-90 T 11-10-2018 IPR005801 ADC synthase GO:0009058 AL543_04300 ef92014925921354478ce2868f02fb4f 462 TIGRFAM TIGR03494 salicyl_syn: salicylate synthase 22 447 6.2E-167 T 11-10-2018 IPR019996 Salicylate synthase GO:0008909|GO:0016833 KEGG: 00130+5.4.4.2|KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6120|MetaCyc: PWY-6406|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL543_04300 ef92014925921354478ce2868f02fb4f 462 Pfam PF00425 chorismate binding enzyme 183 437 7.9E-67 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AL543_03610 1d9db9ddffba9c9983d145300ed6e85d 293 SUPERFAMILY SSF51366 41 264 1.74E-10 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AL543_17695 a75ade978bc02a343478f458cb50d175 320 Gene3D G3DSA:1.10.3720.10 64 306 7.8E-23 T 11-10-2018 IPR035906 MetI-like superfamily AL543_17695 a75ade978bc02a343478f458cb50d175 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 314 4.6E-41 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL543_17695 a75ade978bc02a343478f458cb50d175 320 SUPERFAMILY SSF161098 70 298 1.8E-19 T 11-10-2018 IPR035906 MetI-like superfamily AL543_00355 c0c5c2b9945ffbc39b2e0e88a957bc41 127 Gene3D G3DSA:1.20.120.10 21 117 1.5E-7 T 11-10-2018 AL543_00355 c0c5c2b9945ffbc39b2e0e88a957bc41 127 Pfam PF07361 Cytochrome b562 22 117 6.4E-25 T 11-10-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 AL543_00355 c0c5c2b9945ffbc39b2e0e88a957bc41 127 SUPERFAMILY SSF47175 22 117 2.0E-25 T 11-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 AL543_15310 7c1e1dccdd730dd99d4d135590ae4eb0 241 Pfam PF12119 Protein of unknown function (DUF3581) 1 216 7.1E-97 T 11-10-2018 IPR021974 Protein of unknown function DUF3581 AL543_17790 fdc1ec3bb1e2546fb873c199801c5cf4 214 Pfam PF02698 DUF218 domain 26 147 3.1E-25 T 11-10-2018 IPR003848 Domain of unknown function DUF218 AL543_17790 fdc1ec3bb1e2546fb873c199801c5cf4 214 Gene3D G3DSA:3.40.50.620 17 153 1.4E-31 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL543_20985 2b6710390f9ddbba8bd80859959a244b 40 Pfam PF11665 Protein of unknown function (DUF3265) 14 40 7.8E-7 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL543_01995 efb4c73fb628d823937fdff56333c4dc 98 Hamap MF_00674 UPF0251 protein . 2 98 23.075 T 11-10-2018 IPR002852 Uncharacterised protein family UPF0251 AL543_01995 efb4c73fb628d823937fdff56333c4dc 98 Pfam PF02001 Protein of unknown function DUF134 2 91 1.9E-18 T 11-10-2018 IPR002852 Uncharacterised protein family UPF0251 AL543_18960 e9df31583d08fd345f2b1fbd4041a738 221 SUPERFAMILY SSF69593 7 204 7.32E-28 T 11-10-2018 AL543_18960 e9df31583d08fd345f2b1fbd4041a738 221 Pfam PF01553 Acyltransferase 27 157 8.7E-20 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AL543_18960 e9df31583d08fd345f2b1fbd4041a738 221 SMART SM00563 38 160 1.1E-28 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AL543_13780 5893cd9220fccf0a74dbf2518860e9f5 395 SUPERFAMILY SSF48239 106 379 2.51E-16 T 11-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid AL543_03390 e89a9ae1d06d8635d1485dcd713f6a80 386 Pfam PF13729 F plasmid transfer operon, TraF, protein 49 303 1.0E-71 T 11-10-2018 IPR032811 Putative conjugal transfer protein TraF-related AL543_01065 3045edd5335510c9048d76b96e34dd60 257 Gene3D G3DSA:2.50.20.10 17 252 1.8E-79 T 11-10-2018 AL543_01065 3045edd5335510c9048d76b96e34dd60 257 Pfam PF17131 Outer membrane lipoprotein-sorting protein 69 251 7.7E-59 T 11-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein AL543_06050 5dcce995949cebd8fd35f55ea7f06e0e 214 Pfam PF03922 OmpW family 23 214 2.4E-74 T 11-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 AL543_06050 5dcce995949cebd8fd35f55ea7f06e0e 214 Gene3D G3DSA:2.40.160.20 22 214 1.5E-79 T 11-10-2018 AL543_06050 5dcce995949cebd8fd35f55ea7f06e0e 214 SUPERFAMILY SSF56925 23 214 3.4E-33 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AL543_14260 ce058cd6d38a4c7bb72ef39fdcb2aaa2 159 Pfam PF02391 MoaE protein 7 120 7.1E-37 T 11-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 AL543_14260 ce058cd6d38a4c7bb72ef39fdcb2aaa2 159 SUPERFAMILY SSF54690 4 149 5.36E-55 T 11-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 AL543_14260 ce058cd6d38a4c7bb72ef39fdcb2aaa2 159 Gene3D G3DSA:3.90.1170.40 1 149 3.8E-54 T 11-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 AL543_17995 7b18797755618f5c4093bddbe6df9056 297 Gene3D G3DSA:3.40.50.1100 16 282 1.3E-20 T 11-10-2018 AL543_17995 7b18797755618f5c4093bddbe6df9056 297 PIRSF PIRSF006278 3 295 1.8E-19 T 11-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase AL543_17995 7b18797755618f5c4093bddbe6df9056 297 Gene3D G3DSA:3.40.50.1100 33 136 1.3E-20 T 11-10-2018 AL543_17995 7b18797755618f5c4093bddbe6df9056 297 SUPERFAMILY SSF53686 7 294 4.45E-53 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL543_16140 52b53c9ff1cd8c6c4f7c99b902944574 223 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 216 1.6E-44 T 11-10-2018 IPR006214 Bax inhibitor 1-related AL543_03605 29f0082098b3258387157bab361e4abc 120 Gene3D G3DSA:1.20.58.280 6 112 3.9E-28 T 11-10-2018 AL543_03605 29f0082098b3258387157bab361e4abc 120 SUPERFAMILY SSF46973 12 108 2.09E-27 T 11-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 AL543_03605 29f0082098b3258387157bab361e4abc 120 PIRSF PIRSF000699 5 114 1.5E-28 T 11-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 AL543_03605 29f0082098b3258387157bab361e4abc 120 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 15 107 1.2E-25 T 11-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 AL543_01115 f8676c38ed22a6561e73038cd2bb24f6 379 Pfam PF08308 PEGA domain 310 374 4.8E-24 T 11-10-2018 IPR013229 PEGA AL543_11570 c70729c19cd28fcb984bdbd514a30823 140 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 3 139 24.265 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AL543_11570 c70729c19cd28fcb984bdbd514a30823 140 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 6 136 4.1E-48 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AL543_11570 c70729c19cd28fcb984bdbd514a30823 140 SMART SM00732 3 104 2.3E-35 T 11-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 AL543_11570 c70729c19cd28fcb984bdbd514a30823 140 SUPERFAMILY SSF53098 3 137 3.49E-37 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_11570 c70729c19cd28fcb984bdbd514a30823 140 Gene3D G3DSA:3.30.420.140 1 138 8.0E-39 T 11-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 AL543_11570 c70729c19cd28fcb984bdbd514a30823 140 Pfam PF03652 Holliday junction resolvase 4 136 1.6E-35 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AL543_13605 1323d714a2dad6b985d1bcfb9e567eb3 128 Pfam PF04241 Protein of unknown function (DUF423) 20 110 5.5E-31 T 11-10-2018 IPR006696 Protein of unknown function DUF423 AL543_00185 4d5a3227b44dc2ba28f3496815da625b 401 Pfam PF13252 Protein of unknown function (DUF4043) 49 397 3.6E-130 T 11-10-2018 IPR025267 Protein of unknown function DUF4043 AL543_04450 02e631f4d3ddb67fca746eb2d262fc79 522 Pfam PF01019 Gamma-glutamyltranspeptidase 19 514 7.1E-127 T 11-10-2018 AL543_04450 02e631f4d3ddb67fca746eb2d262fc79 522 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 213 229 5.1E-18 T 11-10-2018 AL543_04450 02e631f4d3ddb67fca746eb2d262fc79 522 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 388 403 5.1E-18 T 11-10-2018 AL543_04450 02e631f4d3ddb67fca746eb2d262fc79 522 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 95 113 5.1E-18 T 11-10-2018 AL543_04450 02e631f4d3ddb67fca746eb2d262fc79 522 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 357 375 5.1E-18 T 11-10-2018 AL543_04450 02e631f4d3ddb67fca746eb2d262fc79 522 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 26 51 5.1E-18 T 11-10-2018 AL543_04450 02e631f4d3ddb67fca746eb2d262fc79 522 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 114 133 5.1E-18 T 11-10-2018 AL543_04450 02e631f4d3ddb67fca746eb2d262fc79 522 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 333 351 5.1E-18 T 11-10-2018 AL543_04450 02e631f4d3ddb67fca746eb2d262fc79 522 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 242 261 5.1E-18 T 11-10-2018 AL543_04450 02e631f4d3ddb67fca746eb2d262fc79 522 Gene3D G3DSA:3.60.20.40 334 517 4.1E-58 T 11-10-2018 AL543_04450 02e631f4d3ddb67fca746eb2d262fc79 522 SUPERFAMILY SSF56235 3 515 4.08E-130 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL543_04450 02e631f4d3ddb67fca746eb2d262fc79 522 Gene3D G3DSA:1.10.246.130 229 333 2.4E-12 T 11-10-2018 AL543_17530 787a0755e5c22274bd6803fdecf2faa2 395 Pfam PF11301 Protein of unknown function (DUF3103) 41 394 2.2E-179 T 11-10-2018 IPR021452 Protein of unknown function DUF3103 AL543_00390 9f8250e8f9b2215954a54e000d3d8eb9 279 PIRSF PIRSF028200 1 279 4.3E-81 T 11-10-2018 IPR016875 Uncharacterised conserved protein UCP028200 AL543_19815 8d6b5d098330e406b55cdb0e5e3c6a81 140 Pfam PF03788 LrgA family 21 114 3.0E-28 T 11-10-2018 IPR005538 LrgA/CidA family GO:0016021 AL543_08400 dc8dddc0232b69c91aa5bbf052380474 329 Pfam PF02653 Branched-chain amino acid transport system / permease component 50 316 2.9E-45 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AL543_14575 35eb000a3a61a62f6c3fe394e293defe 129 SUPERFAMILY SSF103481 16 116 1.83E-15 T 11-10-2018 AL543_14575 35eb000a3a61a62f6c3fe394e293defe 129 Gene3D G3DSA:1.10.3730.20 11 119 4.8E-24 T 11-10-2018 AL543_14575 35eb000a3a61a62f6c3fe394e293defe 129 Pfam PF00893 Small Multidrug Resistance protein 13 104 1.5E-15 T 11-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 AL543_05550 e8dbf670d0164e3884a75dd45be47e8b 141 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 49 87 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AL543_05550 e8dbf670d0164e3884a75dd45be47e8b 141 Gene3D G3DSA:3.40.140.10 1 140 4.1E-36 T 11-10-2018 AL543_05550 e8dbf670d0164e3884a75dd45be47e8b 141 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 97 2.1E-15 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain AL543_05550 e8dbf670d0164e3884a75dd45be47e8b 141 SUPERFAMILY SSF53927 2 137 8.28E-38 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AL543_21420 1022d3ee81e68bba8400d7300d506cea 44 Pfam PF11665 Protein of unknown function (DUF3265) 13 40 2.6E-13 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL543_16850 3592264e32f5444815a01b64496a1c73 65 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 10 30 7.1E-6 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AL543_16850 3592264e32f5444815a01b64496a1c73 65 PIRSF PIRSF036704 1 65 6.4E-34 T 11-10-2018 IPR014177 Putative formate dehydrogenase, TAT signal-containing AL543_16850 3592264e32f5444815a01b64496a1c73 65 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 10 33 2.7E-6 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AL543_16850 3592264e32f5444815a01b64496a1c73 65 TIGRFAM TIGR02811 formate_TAT: formate dehydrogenase region TAT target 1 65 5.6E-25 T 11-10-2018 IPR014177 Putative formate dehydrogenase, TAT signal-containing AL543_02135 34672e6389f13ddd53609af048bdc93f 468 TIGRFAM TIGR03362 VI_chp_7: type VI secretion-associated protein, VC_A0119 family 7 465 1.3E-145 T 11-10-2018 IPR017739 Type VI secretion system-associated, VCA0119 AL543_02135 34672e6389f13ddd53609af048bdc93f 468 Pfam PF16989 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ 215 464 1.1E-82 T 11-10-2018 IPR017739 Type VI secretion system-associated, VCA0119 AL543_02135 34672e6389f13ddd53609af048bdc93f 468 Pfam PF06812 ImpA, N-terminal, type VI secretion system 12 125 1.4E-25 T 11-10-2018 IPR010657 ImpA, N-terminal AL543_04475 e880b080e0020560ee2bf180cdf601cb 766 Pfam PF06934 Fatty acid cis/trans isomerase (CTI) 83 765 1.2E-293 T 11-10-2018 IPR010706 Fatty acid cis-trans isomerase AL543_00720 4b75c51d137154af63deff97e021568f 399 Pfam PF12060 Domain of unknown function (DUF3541) 62 284 1.1E-113 T 11-10-2018 IPR021928 Protein of unknown function DUF3541 AL543_20335 da91986d3c8d65b55cb4d097195b2838 131 PIRSF PIRSF002889 1 131 7.7E-35 T 11-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 AL543_20335 da91986d3c8d65b55cb4d097195b2838 131 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 129 1.6E-29 T 11-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 AL543_00150 b4b1a6b3d13fdb06126280cba2a87f5f 658 Pfam PF09327 Domain of unknown function (DUF1983) 280 357 2.4E-15 T 11-10-2018 IPR015406 Domain of unknown function DUF1983 AL543_14140 5d09647395b3f285d356dc0bda304787 163 Pfam PF02674 Colicin V production protein 4 142 1.2E-35 T 11-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 AL543_04960 2ec6ecc080337c7aca9804a560ebc92f 166 SUPERFAMILY SSF52218 1 163 7.61E-28 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL543_04960 2ec6ecc080337c7aca9804a560ebc92f 166 Pfam PF03358 NADPH-dependent FMN reductase 1 115 4.4E-22 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AL543_04960 2ec6ecc080337c7aca9804a560ebc92f 166 Gene3D G3DSA:3.40.50.360 1 166 2.1E-31 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL543_20375 0325dcab4695cf585d999ae7438c5dae 145 PIRSF PIRSF028687 2 145 1.3E-61 T 11-10-2018 IPR007293 Flagellar protein FlgP AL543_20375 0325dcab4695cf585d999ae7438c5dae 145 Pfam PF02169 LPP20 lipoprotein 29 120 1.1E-7 T 11-10-2018 IPR024952 Lipoprotein LPP20-like AL543_08715 6167ad457a952bb540fbf0f7ef3b9a03 64 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 1 51 5.6E-23 T 11-10-2018 IPR010260 DNA-binding transcriptional activator AlpA AL543_08715 6167ad457a952bb540fbf0f7ef3b9a03 64 Gene3D G3DSA:1.10.238.160 2 59 3.6E-5 T 11-10-2018 AL543_18460 b0169d71996dcd4eb2c17e062c8d9b5c 328 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 28 325 3.5E-84 T 11-10-2018 IPR018707 Protein of unknown function DUF2219 AL543_18460 b0169d71996dcd4eb2c17e062c8d9b5c 328 Gene3D G3DSA:2.40.128.140 21 326 2.4E-55 T 11-10-2018 IPR037107 Putative outer membrane protein superfamily AL543_13650 8d6266eeab99dafea02249e76981fa43 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 223 1.1E-23 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL543_13650 8d6266eeab99dafea02249e76981fa43 225 SUPERFAMILY SSF161098 15 210 6.67E-49 T 11-10-2018 IPR035906 MetI-like superfamily AL543_13650 8d6266eeab99dafea02249e76981fa43 225 Gene3D G3DSA:1.10.3720.10 12 225 9.0E-53 T 11-10-2018 IPR035906 MetI-like superfamily AL543_21325 3184a28362061b8149252c86c8ab877a 38 Pfam PF11665 Protein of unknown function (DUF3265) 11 38 4.2E-11 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL543_00100 b34fc8be19ac866d0e7f4991250234c7 210 SUPERFAMILY SSF53639 1 205 2.35E-61 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily AL543_00100 b34fc8be19ac866d0e7f4991250234c7 210 Gene3D G3DSA:3.40.225.10 1 210 9.4E-61 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily AL543_00100 b34fc8be19ac866d0e7f4991250234c7 210 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 9 185 6.5E-47 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal AL543_00100 b34fc8be19ac866d0e7f4991250234c7 210 SMART SM01007 8 187 6.1E-62 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal AL543_13730 b888ebf9faa9e1bf5b17f9a2e2d352fc 172 SUPERFAMILY SSF52788 4 152 5.76E-38 T 11-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily AL543_13730 b888ebf9faa9e1bf5b17f9a2e2d352fc 172 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 8 149 2.3E-28 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I AL543_13730 b888ebf9faa9e1bf5b17f9a2e2d352fc 172 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 124 139 1.1E-15 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AL543_13730 b888ebf9faa9e1bf5b17f9a2e2d352fc 172 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 8 25 1.1E-15 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AL543_13730 b888ebf9faa9e1bf5b17f9a2e2d352fc 172 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 106 119 1.1E-15 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AL543_13730 b888ebf9faa9e1bf5b17f9a2e2d352fc 172 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 83 98 1.1E-15 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AL543_13730 b888ebf9faa9e1bf5b17f9a2e2d352fc 172 Gene3D G3DSA:3.40.50.2300 6 157 3.1E-41 T 11-10-2018 AL543_13730 b888ebf9faa9e1bf5b17f9a2e2d352fc 172 SMART SM00226 6 152 8.7E-20 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I AL543_02290 50636f0063af3c5f90ea0fc53067e3c9 95 Gene3D G3DSA:3.40.50.2300 1 90 8.0E-21 T 11-10-2018 AL543_02290 50636f0063af3c5f90ea0fc53067e3c9 95 SUPERFAMILY SSF52794 1 91 1.39E-21 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 AL543_02290 50636f0063af3c5f90ea0fc53067e3c9 95 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 84 7.8E-15 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL543_05430 4e5344b344c5c8fed08e1efe1e3edf75 319 Pfam PF13936 Helix-turn-helix domain 3 45 3.2E-14 T 11-10-2018 IPR025246 Transposase IS30-like HTH domain AL543_05430 4e5344b344c5c8fed08e1efe1e3edf75 319 SUPERFAMILY SSF53098 171 318 1.14E-24 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_05430 4e5344b344c5c8fed08e1efe1e3edf75 319 SUPERFAMILY SSF46689 2 118 2.69E-5 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL543_05430 4e5344b344c5c8fed08e1efe1e3edf75 319 Gene3D G3DSA:3.30.420.10 163 319 5.9E-11 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AL543_05430 4e5344b344c5c8fed08e1efe1e3edf75 319 Pfam PF00665 Integrase core domain 171 275 9.9E-11 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AL543_03725 28dbdfdc663c9dd196abf63d93c8d5ad 698 Gene3D G3DSA:1.10.3720.10 144 415 2.1E-50 T 11-10-2018 IPR035906 MetI-like superfamily AL543_03725 28dbdfdc663c9dd196abf63d93c8d5ad 698 Gene3D G3DSA:1.10.3720.10 433 693 1.9E-45 T 11-10-2018 IPR035906 MetI-like superfamily AL543_03725 28dbdfdc663c9dd196abf63d93c8d5ad 698 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 213 404 1.2E-15 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL543_03725 28dbdfdc663c9dd196abf63d93c8d5ad 698 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 505 682 1.7E-12 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL543_03725 28dbdfdc663c9dd196abf63d93c8d5ad 698 SUPERFAMILY SSF161098 150 410 9.68E-41 T 11-10-2018 IPR035906 MetI-like superfamily AL543_03725 28dbdfdc663c9dd196abf63d93c8d5ad 698 SUPERFAMILY SSF161098 440 679 3.71E-44 T 11-10-2018 IPR035906 MetI-like superfamily AL543_07935 c68371a8bec55d3b020653f0b65a1f01 263 Gene3D G3DSA:3.10.180.50 2 239 2.0E-93 T 11-10-2018 AL543_07935 c68371a8bec55d3b020653f0b65a1f01 263 Pfam PF07063 Domain of unknown function (DUF1338) 30 118 7.7E-21 T 11-10-2018 IPR009770 Domain of unknown function DUF1338 AL543_07935 c68371a8bec55d3b020653f0b65a1f01 263 Pfam PF07063 Domain of unknown function (DUF1338) 136 261 1.7E-28 T 11-10-2018 IPR009770 Domain of unknown function DUF1338 AL543_07935 c68371a8bec55d3b020653f0b65a1f01 263 SMART SM01150 3 262 1.8E-116 T 11-10-2018 IPR009770 Domain of unknown function DUF1338 AL543_17495 340a74d84d8e67fc765244d9b11b8214 152 SUPERFAMILY SSF46785 16 145 7.61E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_17495 340a74d84d8e67fc765244d9b11b8214 152 Gene3D G3DSA:1.10.10.10 7 149 3.8E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_17495 340a74d84d8e67fc765244d9b11b8214 152 SMART SM00347 32 136 0.0032 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL543_06580 0d34232e63c08bfc0177a3e7061241ec 421 Pfam PF07670 Nucleoside recognition 99 195 1.1E-7 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AL543_06580 0d34232e63c08bfc0177a3e7061241ec 421 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 5 415 7.5E-152 T 11-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 AL543_06580 0d34232e63c08bfc0177a3e7061241ec 421 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 201 415 1.0E-74 T 11-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 AL543_06580 0d34232e63c08bfc0177a3e7061241ec 421 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 2.2E-26 T 11-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 AL543_01745 63232034d3ea6ab8c689004d0fcd7ba7 619 SUPERFAMILY SSF90123 25 339 7.19E-52 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AL543_01745 63232034d3ea6ab8c689004d0fcd7ba7 619 Pfam PF00664 ABC transporter transmembrane region 44 309 1.6E-18 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AL543_01745 63232034d3ea6ab8c689004d0fcd7ba7 619 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL543_01745 63232034d3ea6ab8c689004d0fcd7ba7 619 Gene3D G3DSA:3.40.50.300 351 604 4.0E-91 T 11-10-2018 AL543_01745 63232034d3ea6ab8c689004d0fcd7ba7 619 SUPERFAMILY SSF52540 350 601 3.66E-89 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_01745 63232034d3ea6ab8c689004d0fcd7ba7 619 Gene3D G3DSA:1.20.1560.10 10 334 3.3E-27 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AL543_01745 63232034d3ea6ab8c689004d0fcd7ba7 619 SMART SM00382 386 577 6.8E-20 T 11-10-2018 IPR003593 AAA+ ATPase domain AL543_01745 63232034d3ea6ab8c689004d0fcd7ba7 619 Pfam PF00005 ABC transporter 378 531 1.9E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL543_06325 37485c14f702da76a56a896538862aec 191 Pfam PF03923 Uncharacterized lipoprotein 28 186 2.1E-52 T 11-10-2018 IPR005619 Uncharacterised protein family, YajG AL543_00335 1d4c08de25f2ca68a4a9aabcf483461a 470 Pfam PF03929 PepSY-associated TM region 23 407 4.0E-61 T 11-10-2018 IPR005625 PepSY-associated TM protein AL543_21845 1a376c15148daea2c6bcd82edc588fad 36 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 29 5.2E-19 T 11-10-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 AL543_21845 1a376c15148daea2c6bcd82edc588fad 36 Pfam PF08173 Membrane bound YbgT-like protein 1 26 1.4E-15 T 11-10-2018 IPR012994 Membrane bound YbgT-like AL543_16955 8b78e2c35830005904e95bbea778bf44 113 Pfam PF12290 Protein of unknown function (DUF3802) 2 109 2.9E-42 T 11-10-2018 IPR020979 Uncharacterised protein family A0KLC6 AL543_08895 17889056e8f1344b94366bb3f603a408 232 Pfam PF04340 Protein of unknown function, DUF484 5 221 1.1E-81 T 11-10-2018 IPR007435 Protein of unknown function DUF484 AL543_08895 17889056e8f1344b94366bb3f603a408 232 Gene3D G3DSA:3.30.450.40 42 218 3.6E-38 T 11-10-2018 IPR029016 GAF-like domain superfamily AL543_13355 86ddfb101af5fdc0b4ce72392962ec0f 312 Pfam PF08665 PglZ domain 43 213 1.3E-27 T 11-10-2018 IPR013973 PglZ domain AL543_13355 86ddfb101af5fdc0b4ce72392962ec0f 312 SUPERFAMILY SSF53649 42 299 1.22E-5 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AL543_13085 1013d13c6a118032b7d24f4254b3a98b 287 Gene3D G3DSA:3.40.50.300 1 273 2.8E-78 T 11-10-2018 AL543_13085 1013d13c6a118032b7d24f4254b3a98b 287 Pfam PF13481 AAA domain 6 180 1.8E-30 T 11-10-2018 AL543_13085 1013d13c6a118032b7d24f4254b3a98b 287 SUPERFAMILY SSF52540 14 184 8.3E-15 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_04400 e14f5a7d6474c9fa4c0b19134caa3a12 388 Pfam PF13729 F plasmid transfer operon, TraF, protein 47 303 8.4E-77 T 11-10-2018 IPR032811 Putative conjugal transfer protein TraF-related AL543_04400 e14f5a7d6474c9fa4c0b19134caa3a12 388 SUPERFAMILY SSF56935 225 376 4.58E-5 T 11-10-2018 AL543_20305 0b855a5ec6527e2847b19605167b0156 261 PRINTS PR01008 Flagellar L-ring protein signature 240 254 1.9E-21 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AL543_20305 0b855a5ec6527e2847b19605167b0156 261 PRINTS PR01008 Flagellar L-ring protein signature 177 192 1.9E-21 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AL543_20305 0b855a5ec6527e2847b19605167b0156 261 PRINTS PR01008 Flagellar L-ring protein signature 203 219 1.9E-21 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AL543_20305 0b855a5ec6527e2847b19605167b0156 261 PRINTS PR01008 Flagellar L-ring protein signature 105 117 1.9E-21 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AL543_20305 0b855a5ec6527e2847b19605167b0156 261 PRINTS PR01008 Flagellar L-ring protein signature 224 238 1.9E-21 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AL543_20305 0b855a5ec6527e2847b19605167b0156 261 Hamap MF_00415 Flagellar L-ring protein [flgH]. 4 261 27.968 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AL543_20305 0b855a5ec6527e2847b19605167b0156 261 Pfam PF02107 Flagellar L-ring protein 83 258 1.6E-57 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AL543_17255 1d636c7c6b01412907c82d2d22408dc9 226 PIRSF PIRSF028063 1 221 3.8E-139 T 11-10-2018 IPR014538 Uncharacterised conserved protein, topoisomerase zinc finger AL543_17255 1d636c7c6b01412907c82d2d22408dc9 226 Pfam PF10881 Protein of unknown function (DUF2726) 38 160 5.1E-37 T 11-10-2018 IPR024402 Domain of unknown function DUF2726 AL543_18845 5b6d36713cd1c36e4016d180be0b746f 93 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 93 18.8 T 11-10-2018 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 AL543_18845 5b6d36713cd1c36e4016d180be0b746f 93 Pfam PF06305 Lipopolysaccharide assembly protein A domain 22 83 5.2E-14 T 11-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 AL543_02600 f8cd2a0c3a37e21bc4cc7fce6a412fe8 224 SMART SM01040 11 104 9.3E-25 T 11-10-2018 IPR003497 BRO N-terminal domain AL543_02600 f8cd2a0c3a37e21bc4cc7fce6a412fe8 224 Pfam PF02498 BRO family, N-terminal domain 12 100 7.4E-11 T 11-10-2018 IPR003497 BRO N-terminal domain AL543_03135 cd9ecd9b44f9976ddf054a0cefb4aa0c 815 Pfam PF02687 FtsX-like permease family 722 799 1.1E-5 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AL543_04180 51bba482783455132de32b893adf2d3b 352 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 166 347 1.2E-25 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL543_04180 51bba482783455132de32b893adf2d3b 352 SUPERFAMILY SSF161098 143 330 6.54E-20 T 11-10-2018 IPR035906 MetI-like superfamily AL543_04180 51bba482783455132de32b893adf2d3b 352 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 17 57 2.1E-8 T 11-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AL543_04180 51bba482783455132de32b893adf2d3b 352 Gene3D G3DSA:1.10.3720.10 136 349 1.1E-17 T 11-10-2018 IPR035906 MetI-like superfamily AL543_07095 bee9a7d74e74c3e5d6df3c1d6c068377 427 SUPERFAMILY SSF56935 29 427 1.06E-21 T 11-10-2018 AL543_19365 7d1132dd264fd017d7bc0d60cb8be475 267 Gene3D G3DSA:3.30.470.10 1 106 2.3E-26 T 11-10-2018 AL543_19365 7d1132dd264fd017d7bc0d60cb8be475 267 Pfam PF01063 Amino-transferase class IV 24 247 1.5E-45 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 AL543_19365 7d1132dd264fd017d7bc0d60cb8be475 267 SUPERFAMILY SSF56752 1 261 1.09E-71 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 AL543_19365 7d1132dd264fd017d7bc0d60cb8be475 267 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 3 263 6.8E-103 T 11-10-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 AL543_19365 7d1132dd264fd017d7bc0d60cb8be475 267 Gene3D G3DSA:3.20.10.10 112 267 9.7E-51 T 11-10-2018 AL543_19365 7d1132dd264fd017d7bc0d60cb8be475 267 ProSitePatterns PS00770 Aminotransferases class-IV signature. 173 202 - T 11-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 AL543_16560 ce58fb9daf250b104915f98896d14bfe 256 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 251 4.8E-19 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL543_16560 ce58fb9daf250b104915f98896d14bfe 256 SUPERFAMILY SSF161098 5 254 1.31E-55 T 11-10-2018 IPR035906 MetI-like superfamily AL543_16560 ce58fb9daf250b104915f98896d14bfe 256 Gene3D G3DSA:1.10.3720.10 4 256 1.2E-48 T 11-10-2018 IPR035906 MetI-like superfamily AL543_03755 5cbcef9d6fbd160972241db1dbb8eb54 42 Pfam PF09574 Protein of unknown function (Duf2374) 1 42 2.7E-24 T 11-10-2018 IPR014175 Conserved hypothetical protein CHP02808 AL543_03755 5cbcef9d6fbd160972241db1dbb8eb54 42 TIGRFAM TIGR02808 short_TIGR02808: TIGR02808 family protein 1 42 4.9E-29 T 11-10-2018 IPR014175 Conserved hypothetical protein CHP02808 AL543_05235 11d704a6c0b8979d11303526ebfaea75 140 SUPERFAMILY SSF54593 1 133 2.61E-15 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL543_05235 11d704a6c0b8979d11303526ebfaea75 140 Gene3D G3DSA:3.10.180.10 1 131 4.5E-12 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL543_05235 11d704a6c0b8979d11303526ebfaea75 140 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 99 3.5E-6 T 11-10-2018 AL543_01770 016fd4f0ce3ad19c8928238e08b119b6 164 PIRSF PIRSF011443 1 163 2.5E-46 T 11-10-2018 IPR026267 Inner membrane protein YgjV AL543_01770 016fd4f0ce3ad19c8928238e08b119b6 164 Pfam PF10688 Bacterial inner membrane protein 5 160 3.6E-53 T 11-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV AL543_05535 4c66bb17b5510107d9b53ff3c0b53a4f 60 Pfam PF04875 Protein of unknown function, DUF645 2 60 1.3E-34 T 11-10-2018 IPR006959 Protein of unknown function DUF645 AL543_12490 d340635dafb441416643ab4b937dd5c9 264 Pfam PF01925 Sulfite exporter TauE/SafE 9 261 7.2E-51 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AL543_21400 10242ede680ab7426b611aaed669cca7 36 Pfam PF11665 Protein of unknown function (DUF3265) 10 36 8.9E-7 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL543_01445 7275134197a5925b632057de4bd25b3f 624 Pfam PF05787 Bacterial protein of unknown function (DUF839) 56 591 4.8E-210 T 11-10-2018 IPR008557 Protein of unknown function DUF839 AL543_01445 7275134197a5925b632057de4bd25b3f 624 SUPERFAMILY SSF63829 286 591 7.19E-17 T 11-10-2018 AL543_10630 b5c6e0223f54feae95d0bf64164e2f10 140 SUPERFAMILY SSF55729 5 115 6.67E-13 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL543_10630 b5c6e0223f54feae95d0bf64164e2f10 140 Pfam PF13508 Acetyltransferase (GNAT) domain 32 108 3.6E-10 T 11-10-2018 IPR000182 GNAT domain AL543_10630 b5c6e0223f54feae95d0bf64164e2f10 140 Gene3D G3DSA:3.40.630.30 13 130 6.6E-12 T 11-10-2018 AL543_10420 7a603177106a2ff88165e303f0700917 445 PIRSF PIRSF006060 1 437 5.4E-49 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AL543_10420 7a603177106a2ff88165e303f0700917 445 Pfam PF13520 Amino acid permease 8 421 6.1E-36 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AL543_10420 7a603177106a2ff88165e303f0700917 445 Gene3D G3DSA:1.20.1740.10 1 438 1.7E-59 T 11-10-2018 AL543_21145 d60c60baa925c8b9dfb7d33d92e506f2 44 Pfam PF04875 Protein of unknown function, DUF645 1 44 2.6E-21 T 11-10-2018 IPR006959 Protein of unknown function DUF645 AL543_12810 88a00716e5cbe578d292354343a8ffae 240 SUPERFAMILY SSF55469 1 239 3.53E-71 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AL543_12810 88a00716e5cbe578d292354343a8ffae 240 Pfam PF00881 Nitroreductase family 10 159 3.9E-19 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AL543_12810 88a00716e5cbe578d292354343a8ffae 240 Gene3D G3DSA:3.40.109.10 1 240 1.1E-71 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AL543_12810 88a00716e5cbe578d292354343a8ffae 240 PIRSF PIRSF005426 1 240 6.0E-79 T 11-10-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 AL543_19255 d83c0076f8f5feef20d1a5da4db2f77e 147 Pfam PF01641 SelR domain 28 145 6.0E-54 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AL543_19255 d83c0076f8f5feef20d1a5da4db2f77e 147 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 24 144 1.7E-55 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AL543_19255 d83c0076f8f5feef20d1a5da4db2f77e 147 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 24 147 37.096 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AL543_19255 d83c0076f8f5feef20d1a5da4db2f77e 147 Gene3D G3DSA:2.170.150.20 14 147 2.7E-60 T 11-10-2018 AL543_19255 d83c0076f8f5feef20d1a5da4db2f77e 147 SUPERFAMILY SSF51316 23 146 2.25E-57 T 11-10-2018 IPR011057 Mss4-like superfamily AL543_16150 dd05e1c6393c64c9d5ef7493e49a8d30 365 Gene3D G3DSA:1.10.3720.10 148 363 6.0E-48 T 11-10-2018 IPR035906 MetI-like superfamily AL543_16150 dd05e1c6393c64c9d5ef7493e49a8d30 365 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 173 349 2.5E-22 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL543_16150 dd05e1c6393c64c9d5ef7493e49a8d30 365 SUPERFAMILY SSF161098 155 346 5.63E-40 T 11-10-2018 IPR035906 MetI-like superfamily AL543_16150 dd05e1c6393c64c9d5ef7493e49a8d30 365 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 155 251 2.1E-21 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 AL543_02165 96fa2e2d6281edf043eb693247a78b52 81 Gene3D G3DSA:1.10.8.1160 1 81 9.9E-41 T 11-10-2018 AL543_04005 648246202f1f20da4ef25965905876ab 170 Gene3D G3DSA:3.40.1280.10 7 150 1.7E-18 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL543_04005 648246202f1f20da4ef25965905876ab 170 SUPERFAMILY SSF75217 6 144 5.76E-27 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AL543_04005 648246202f1f20da4ef25965905876ab 170 Pfam PF00588 SpoU rRNA Methylase family 7 140 9.1E-19 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AL543_06335 a90040529beab964d4bc877437a572cb 466 Gene3D G3DSA:1.20.1250.20 248 444 4.9E-9 T 11-10-2018 AL543_06335 a90040529beab964d4bc877437a572cb 466 SUPERFAMILY SSF103473 8 442 1.96E-38 T 11-10-2018 IPR036259 MFS transporter superfamily AL543_06335 a90040529beab964d4bc877437a572cb 466 Gene3D G3DSA:1.20.1250.20 13 223 2.4E-12 T 11-10-2018 AL543_06335 a90040529beab964d4bc877437a572cb 466 Pfam PF07690 Major Facilitator Superfamily 25 398 1.2E-18 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL543_02755 b790b6a16cd0c9cb0c6eaf4f315e8578 175 SUPERFAMILY SSF52374 1 173 1.19E-28 T 11-10-2018 AL543_02755 b790b6a16cd0c9cb0c6eaf4f315e8578 175 Pfam PF01467 Cytidylyltransferase-like 7 132 5.8E-9 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AL543_02755 b790b6a16cd0c9cb0c6eaf4f315e8578 175 Gene3D G3DSA:3.40.50.620 1 174 1.8E-46 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL543_06005 ac499b61731a1079cf4d0f93e93477c7 307 Pfam PF00248 Aldo/keto reductase family 21 296 4.6E-58 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain AL543_06005 ac499b61731a1079cf4d0f93e93477c7 307 Gene3D G3DSA:3.20.20.100 3 307 1.0E-98 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AL543_06005 ac499b61731a1079cf4d0f93e93477c7 307 PRINTS PR00069 Aldo-keto reductase signature 119 137 1.4E-5 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AL543_06005 ac499b61731a1079cf4d0f93e93477c7 307 PRINTS PR00069 Aldo-keto reductase signature 150 167 1.4E-5 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AL543_06005 ac499b61731a1079cf4d0f93e93477c7 307 SUPERFAMILY SSF51430 8 304 1.22E-69 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AL543_15190 1801cadf5e457ed72125e35ca3bbd478 45 Pfam PF08056 Tryptophan operon leader peptide 10 45 1.4E-11 T 11-10-2018 IPR012639 Tryptophan operon leader peptide AL543_15190 1801cadf5e457ed72125e35ca3bbd478 45 ProDom PD926058 BIOSYNTHESIS PEPTIDE LEADER AROMATIC VC1176 VV1222 OPERON ACID AMINO AMINO-ACID 10 45 3.0E-6 T 11-10-2018 IPR012639 Tryptophan operon leader peptide AL543_19170 12874d5f89774dc92af22ebbfba63e6a 200 Pfam PF03942 DTW domain 3 185 3.5E-50 T 11-10-2018 IPR005636 DTW AL543_19170 12874d5f89774dc92af22ebbfba63e6a 200 SMART SM01144 1 190 7.6E-67 T 11-10-2018 IPR005636 DTW AL543_06725 99939acbd4f8a351cd50eaa1b6492e54 261 Pfam PF01925 Sulfite exporter TauE/SafE 12 246 2.9E-40 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AL543_17680 3ee7e0f96230fdaa0d0e3307d5f9f31f 222 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 219 8.8E-95 T 11-10-2018 IPR014319 Phage shock protein, PspA AL543_17680 3ee7e0f96230fdaa0d0e3307d5f9f31f 222 Pfam PF04012 PspA/IM30 family 2 218 4.6E-62 T 11-10-2018 IPR007157 PspA/IM30 AL543_01410 5f188b65bdb4a78ecf5e747f35f7daa5 346 Pfam PF01757 Acyltransferase family 13 331 3.4E-26 T 11-10-2018 IPR002656 Acyltransferase 3 GO:0016747 AL543_20300 b7326002ef6c994984ef0bb92c1e4e21 361 Hamap MF_00416 Flagellar P-ring protein [flgI]. 3 361 40.247 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL543_20300 b7326002ef6c994984ef0bb92c1e4e21 361 PRINTS PR01010 Flagellar P-ring protein signature 158 176 3.3E-86 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL543_20300 b7326002ef6c994984ef0bb92c1e4e21 361 PRINTS PR01010 Flagellar P-ring protein signature 184 202 3.3E-86 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL543_20300 b7326002ef6c994984ef0bb92c1e4e21 361 PRINTS PR01010 Flagellar P-ring protein signature 248 260 3.3E-86 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL543_20300 b7326002ef6c994984ef0bb92c1e4e21 361 PRINTS PR01010 Flagellar P-ring protein signature 20 35 3.3E-86 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL543_20300 b7326002ef6c994984ef0bb92c1e4e21 361 PRINTS PR01010 Flagellar P-ring protein signature 35 50 3.3E-86 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL543_20300 b7326002ef6c994984ef0bb92c1e4e21 361 PRINTS PR01010 Flagellar P-ring protein signature 117 135 3.3E-86 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL543_20300 b7326002ef6c994984ef0bb92c1e4e21 361 PRINTS PR01010 Flagellar P-ring protein signature 52 67 3.3E-86 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL543_20300 b7326002ef6c994984ef0bb92c1e4e21 361 PRINTS PR01010 Flagellar P-ring protein signature 78 97 3.3E-86 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL543_20300 b7326002ef6c994984ef0bb92c1e4e21 361 PRINTS PR01010 Flagellar P-ring protein signature 100 117 3.3E-86 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL543_20300 b7326002ef6c994984ef0bb92c1e4e21 361 Pfam PF02119 Flagellar P-ring protein 20 360 2.9E-137 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL543_17000 4e0d0bc69e024f5b57457fc5c97e2df4 180 Pfam PF01618 MotA/TolQ/ExbB proton channel family 67 173 1.9E-22 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AL543_02860 e676b966ecea68978a5aa822fd933246 100 PIRSF PIRSF028291 1 98 7.1E-37 T 11-10-2018 IPR014543 Uncharacterised conserved protein UCP028291 AL543_02860 e676b966ecea68978a5aa822fd933246 100 Pfam PF09981 Uncharacterized protein conserved in bacteria (DUF2218) 7 95 2.3E-23 T 11-10-2018 IPR014543 Uncharacterised conserved protein UCP028291 AL543_02860 e676b966ecea68978a5aa822fd933246 100 Gene3D G3DSA:3.30.310.50 3 97 1.9E-21 T 11-10-2018 AL543_18415 66d06ed3c1f956565b6bf9cb669031f7 60 Pfam PF10689 Protein of unknown function (DUF2496) 7 49 2.0E-23 T 11-10-2018 IPR019630 Protein of unknown function DUF2496, YbaM-related AL543_13585 292105f0c65b39f7cc3ae3863bdddb5f 319 Pfam PF00691 OmpA family 195 293 8.5E-18 T 11-10-2018 IPR006665 OmpA-like domain AL543_13585 292105f0c65b39f7cc3ae3863bdddb5f 319 Gene3D G3DSA:3.30.1330.60 153 301 3.8E-51 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL543_13585 292105f0c65b39f7cc3ae3863bdddb5f 319 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 8 57 9.4E-18 T 11-10-2018 IPR025713 Motility protein B, N-terminal domain AL543_13585 292105f0c65b39f7cc3ae3863bdddb5f 319 SUPERFAMILY SSF103088 183 299 8.37E-30 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL543_21025 11d609d45f944aeba09f3c76ca7f88b4 36 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 2.2E-14 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL543_20995 11d609d45f944aeba09f3c76ca7f88b4 36 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 2.2E-14 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL543_21150 11d609d45f944aeba09f3c76ca7f88b4 36 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 2.2E-14 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL543_04810 6d3f60985e6730f84bb9ea2671549a7d 153 Gene3D G3DSA:3.40.630.30 1 152 4.5E-28 T 11-10-2018 AL543_04810 6d3f60985e6730f84bb9ea2671549a7d 153 SUPERFAMILY SSF55729 5 146 4.05E-19 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL543_04810 6d3f60985e6730f84bb9ea2671549a7d 153 Pfam PF00583 Acetyltransferase (GNAT) family 44 141 7.9E-17 T 11-10-2018 IPR000182 GNAT domain AL543_00440 7d3ce38535b2ede5f5dcb77bd4cf4269 228 Pfam PF01618 MotA/TolQ/ExbB proton channel family 95 194 4.3E-23 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AL543_16380 fa2e1b75a743cd1f047df6da245587ef 495 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 18 436 2.5E-117 T 11-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane AL543_04445 55c9d5371e45bb7dd342e905696c3e8a 328 Pfam PF11557 Solitary outer membrane autotransporter beta-barrel domain 1 327 6.8E-133 T 11-10-2018 IPR021621 Solitary outer membrane autotransporter beta-barrel domain AL543_10995 21486af1361c38fab658d36343963236 221 TIGRFAM TIGR04219 OMP_w_GlyGly: outer membrane protein 9 221 1.2E-54 T 11-10-2018 IPR026387 Outer membrane protein AL543_10995 21486af1361c38fab658d36343963236 221 Pfam PF13505 Outer membrane protein beta-barrel domain 9 221 1.0E-10 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel AL543_13785 71ac18f1bd87e198ec59a0ceb314cd12 252 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 63 231 7.2E-49 T 11-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 AL543_13785 71ac18f1bd87e198ec59a0ceb314cd12 252 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 65 230 4.4E-61 T 11-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 AL543_02525 f3c4adcaac3366959ef54f7f4c139a16 336 Gene3D G3DSA:3.40.50.2300 1 138 2.9E-5 T 11-10-2018 AL543_02650 f22aa4366b0367a039a621385a82a693 369 Pfam PF10758 Protein of unknown function (DUF2586) 3 362 4.4E-118 T 11-10-2018 IPR019694 Bacteriophage HP1, Orf23 AL543_03100 d0f2b7a1eb007b1fae4f9e8fbe2db391 195 Pfam PF09997 Predicted membrane protein (DUF2238) 40 176 1.8E-52 T 11-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 AL543_03100 d0f2b7a1eb007b1fae4f9e8fbe2db391 195 PIRSF PIRSF020606 2 195 1.2E-81 T 11-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 AL543_14340 f3393275237f90a427411c46a5b342de 253 Pfam PF11859 Protein of unknown function (DUF3379) 11 249 8.5E-84 T 11-10-2018 IPR021806 Protein of unknown function DUF3379 AL543_11650 17dfcd30ea929d2c29d97080eb7e8c06 211 Pfam PF01810 LysE type translocator 15 200 5.7E-39 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL543_06695 3ab76267270e821ee8031886747e4ae8 144 Pfam PF07386 Protein of unknown function (DUF1499) 31 135 7.5E-23 T 11-10-2018 IPR010865 Protein of unknown function DUF1499 AL543_06695 3ab76267270e821ee8031886747e4ae8 144 PIRSF PIRSF026426 1 142 2.3E-45 T 11-10-2018 IPR010865 Protein of unknown function DUF1499 AL543_11345 0ab47d94a25147d5024b03e1324a755e 328 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 15 325 6.8E-113 T 11-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family AL543_11345 0ab47d94a25147d5024b03e1324a755e 328 Gene3D G3DSA:3.40.190.10 36 325 2.9E-112 T 11-10-2018 AL543_11345 0ab47d94a25147d5024b03e1324a755e 328 Pfam PF16868 NMT1-like family 36 325 2.7E-98 T 11-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family AL543_11345 0ab47d94a25147d5024b03e1324a755e 328 Gene3D G3DSA:3.40.190.10 123 261 2.9E-112 T 11-10-2018 AL543_11345 0ab47d94a25147d5024b03e1324a755e 328 SUPERFAMILY SSF53850 31 327 6.62E-90 T 11-10-2018 AL543_11325 e8503aebb95c8e7a7cb4c6d809d5bdb7 265 Gene3D G3DSA:2.60.120.260 26 156 2.2E-12 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily AL543_11325 e8503aebb95c8e7a7cb4c6d809d5bdb7 265 SUPERFAMILY SSF49785 2 155 1.07E-20 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily AL543_12075 c8936dc39c1872f7088d3b5afb8700aa 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 3.4E-6 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AL543_12075 c8936dc39c1872f7088d3b5afb8700aa 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 3.4E-6 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AL543_12075 c8936dc39c1872f7088d3b5afb8700aa 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 3.4E-6 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AL543_12075 c8936dc39c1872f7088d3b5afb8700aa 256 PIRSF PIRSF006648 8 252 4.6E-26 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AL543_12075 c8936dc39c1872f7088d3b5afb8700aa 256 Pfam PF01061 ABC-2 type transporter 8 218 3.5E-40 T 11-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 AL543_18045 24c855bb757d20d814510fd168c52a6f 453 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 56 443 6.4E-99 T 11-10-2018 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 AL543_18045 24c855bb757d20d814510fd168c52a6f 453 Pfam PF03606 C4-dicarboxylate anaerobic carrier 5 448 2.7E-81 T 11-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 AL543_20055 e26d94ffb83b20a1e80c87601b0f90ef 74 Pfam PF11446 Protein of unknown function (DUF2897) 9 55 1.0E-18 T 11-10-2018 IPR021550 Protein of unknown function DUF2897 AL543_15685 181cbdb3bc24ac603bd7742d0fd9558d 335 Gene3D G3DSA:1.20.1420.20 34 335 1.6E-70 T 11-10-2018 IPR038352 Imelysin-like domain superfamily AL543_15685 181cbdb3bc24ac603bd7742d0fd9558d 335 Pfam PF09375 Imelysin 36 307 1.6E-39 T 11-10-2018 IPR018976 Imelysin-like domain AL543_01930 a1f413832138855fd73042c950bc4088 148 Pfam PF07681 DoxX 18 104 5.5E-24 T 11-10-2018 IPR032808 DoxX family AL543_05415 be226d6ea3a9b20b0c83f600c0a06718 304 Pfam PF11185 Protein of unknown function (DUF2971) 119 224 2.6E-10 T 11-10-2018 IPR021352 Protein of unknown function DUF2971 AL543_19810 8ad34ece86d2b2b2dfc2e00be89a0d4a 230 Pfam PF04172 LrgB-like family 14 225 5.2E-71 T 11-10-2018 IPR007300 CidB/LrgB family AL543_00005 37d157d1c8e64deb95b53baa4922c725 101 SUPERFAMILY SSF102114 34 100 6.67E-11 T 11-10-2018 AL543_00005 37d157d1c8e64deb95b53baa4922c725 101 Gene3D G3DSA:3.20.20.70 12 101 3.3E-28 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_14585 3bdb472dc33cc9e1e99d5b28ce21809f 267 Gene3D G3DSA:3.40.50.12500 21 267 7.3E-41 T 11-10-2018 AL543_00835 7c057b67cd74ad7715e65800598a1109 115 SUPERFAMILY SSF52091 6 114 1.1E-9 T 11-10-2018 IPR036513 STAS domain superfamily AL543_00835 7c057b67cd74ad7715e65800598a1109 115 Gene3D G3DSA:3.30.750.24 2 115 1.8E-17 T 11-10-2018 IPR036513 STAS domain superfamily AL543_21370 bca6339f67afd7a6b4943d13e6930059 55 Pfam PF12493 Protein of unknown function (DUF3709) 34 55 5.3E-8 T 11-10-2018 IPR022178 Protein of unknown function DUF3709 AL543_20455 8bcf3ea0e1c0ef31083791964ef6d5f7 346 Pfam PF00586 AIR synthase related protein, N-terminal domain 57 165 5.3E-16 T 11-10-2018 IPR016188 PurM-like, N-terminal domain AL543_20455 8bcf3ea0e1c0ef31083791964ef6d5f7 346 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 8 334 8.4E-150 T 11-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL543_20455 8bcf3ea0e1c0ef31083791964ef6d5f7 346 Pfam PF02769 AIR synthase related protein, C-terminal domain 177 343 7.3E-40 T 11-10-2018 IPR010918 PurM-like, C-terminal domain AL543_20455 8bcf3ea0e1c0ef31083791964ef6d5f7 346 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 8 345 47.428 T 11-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL543_20455 8bcf3ea0e1c0ef31083791964ef6d5f7 346 Gene3D G3DSA:3.30.1330.10 7 171 1.2E-70 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AL543_20455 8bcf3ea0e1c0ef31083791964ef6d5f7 346 SUPERFAMILY SSF56042 172 342 2.39E-62 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AL543_20455 8bcf3ea0e1c0ef31083791964ef6d5f7 346 Gene3D G3DSA:3.90.650.10 172 346 6.2E-74 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AL543_20455 8bcf3ea0e1c0ef31083791964ef6d5f7 346 SUPERFAMILY SSF55326 8 171 1.79E-54 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AL543_13550 039aad4e1c4a94c08f06190de16157e7 345 Pfam PF12069 Protein of unknown function (DUF3549) 3 340 1.8E-132 T 11-10-2018 IPR021936 Protein of unknown function DUF3549 AL543_03070 d999e2c447662db2fb45153ae728880f 434 SUPERFAMILY SSF53613 33 417 2.49E-44 T 11-10-2018 IPR029056 Ribokinase-like AL543_03070 d999e2c447662db2fb45153ae728880f 434 Pfam PF00294 pfkB family carbohydrate kinase 140 293 1.0E-10 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB AL543_10755 14d211d407e1d1558fe8f65b4df5fbb1 471 Pfam PF00939 Sodium:sulfate symporter transmembrane region 9 467 1.6E-49 T 11-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AL543_10755 14d211d407e1d1558fe8f65b4df5fbb1 471 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 38 468 4.9E-81 T 11-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AL543_09035 d9d374de997a061843de3dfd04bdd7ea 284 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 8 283 1.6E-106 T 11-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 AL543_09035 d9d374de997a061843de3dfd04bdd7ea 284 Pfam PF01040 UbiA prenyltransferase family 24 266 1.9E-66 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 AL543_09035 d9d374de997a061843de3dfd04bdd7ea 284 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 1 284 29.794 T 11-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 AL543_09035 d9d374de997a061843de3dfd04bdd7ea 284 Gene3D G3DSA:1.20.120.1780 165 284 1.9E-12 T 11-10-2018 AL543_09035 d9d374de997a061843de3dfd04bdd7ea 284 Gene3D G3DSA:1.10.357.140 19 164 3.2E-42 T 11-10-2018 AL543_10345 75d835858c500dd7788988c4f548bb97 376 Pfam PF14897 EpsG family 39 367 4.2E-23 T 11-10-2018 AL543_09940 c119d027dfcf942849d0e376505f9f49 314 SUPERFAMILY SSF110997 61 133 7.32E-6 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AL543_19940 ed512c82883d91f57a7643d3b4505f0f 147 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 3 142 1.1E-33 T 11-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 AL543_19940 ed512c82883d91f57a7643d3b4505f0f 147 Pfam PF02050 Flagellar FliJ protein 17 140 2.3E-30 T 11-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 AL543_16810 33d5c2f2ecb2ade87e811c665ba8ba04 160 Pfam PF04461 Protein of unknown function (DUF520) 2 159 3.9E-63 T 11-10-2018 IPR007551 Protein of unknown function DUF520 AL543_16810 33d5c2f2ecb2ade87e811c665ba8ba04 160 Gene3D G3DSA:3.30.70.990 9 94 1.2E-26 T 11-10-2018 IPR035570 UPF0234, N-terminal AL543_16810 33d5c2f2ecb2ade87e811c665ba8ba04 160 Gene3D G3DSA:3.30.70.860 95 160 4.0E-30 T 11-10-2018 IPR035571 UPF0234-like, C-terminal AL543_16810 33d5c2f2ecb2ade87e811c665ba8ba04 160 SUPERFAMILY SSF89963 88 160 5.23E-29 T 11-10-2018 IPR036183 YajQ-like superfamily AL543_16810 33d5c2f2ecb2ade87e811c665ba8ba04 160 SUPERFAMILY SSF89963 2 86 8.76E-30 T 11-10-2018 IPR036183 YajQ-like superfamily AL543_16810 33d5c2f2ecb2ade87e811c665ba8ba04 160 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 160 29.029 T 11-10-2018 IPR007551 Protein of unknown function DUF520 AL543_03850 c2e9c3d5d2bccd595db145063948bdec 179 SUPERFAMILY SSF109854 17 160 3.89E-6 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AL543_03185 b0e16acb96f62218d5a274e8b9ba35e2 193 Pfam PF04336 Acyl carrier protein phosphodiesterase 81 185 1.2E-28 T 11-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 AL543_03185 b0e16acb96f62218d5a274e8b9ba35e2 193 PIRSF PIRSF011489 1 193 1.7E-81 T 11-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 AL543_13845 48d27dee91f4d8c4f035bf9586a77c76 198 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 11 189 1.9E-33 T 11-10-2018 IPR003740 Uncharacterised membrane protein YitT AL543_01910 86d2c0b14f48a9879323708d06d91d31 83 Pfam PF11280 Protein of unknown function (DUF3081) 6 81 1.2E-29 T 11-10-2018 IPR021432 Protein of unknown function DUF3081 AL543_10950 8b72cc042677526370b95310ca61eca7 269 Pfam PF04338 Protein of unknown function, DUF481 54 269 4.6E-52 T 11-10-2018 IPR007433 Protein of unknown function DUF481 AL543_12755 a601452867a9fbc72cfb0fa22b97296a 544 Pfam PF03929 PepSY-associated TM region 16 387 9.0E-55 T 11-10-2018 IPR005625 PepSY-associated TM protein AL543_14990 f5997dd0ac6a5df79f38723b93db97fd 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 34.619 T 11-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 AL543_14990 f5997dd0ac6a5df79f38723b93db97fd 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 2.4E-77 T 11-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 AL543_14990 f5997dd0ac6a5df79f38723b93db97fd 245 Pfam PF00977 Histidine biosynthesis protein 1 234 4.2E-76 T 11-10-2018 IPR006062 Histidine biosynthesis GO:0000105 AL543_14990 f5997dd0ac6a5df79f38723b93db97fd 245 Gene3D G3DSA:3.20.20.70 1 245 1.1E-90 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL543_14990 f5997dd0ac6a5df79f38723b93db97fd 245 SUPERFAMILY SSF51366 1 242 5.58E-64 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AL543_05210 9df1fc6e8e70d19fd7f7076a1783a46d 141 Pfam PF11948 Protein of unknown function (DUF3465) 22 141 6.4E-60 T 11-10-2018 IPR021856 Protein of unknown function DUF3465 AL543_16245 21dbb2c71d0b46066e16260de696c1f7 152 SUPERFAMILY SSF158682 1 146 5.62E-28 T 11-10-2018 IPR029024 TerB-like AL543_16245 21dbb2c71d0b46066e16260de696c1f7 152 Gene3D G3DSA:1.10.3680.10 2 138 1.7E-18 T 11-10-2018 IPR029024 TerB-like AL543_16245 21dbb2c71d0b46066e16260de696c1f7 152 Pfam PF05099 Tellurite resistance protein TerB 5 142 6.2E-38 T 11-10-2018 IPR007791 Co-chaperone DjlA, N-terminal AL543_15245 4df69b1d389876b747eadfbb65f7d6fc 109 Pfam PF11872 Protein of unknown function (DUF3392) 3 106 1.2E-39 T 11-10-2018 IPR021813 Protein of unknown function DUF3392 AL543_10315 f7937db9beb5a9c5300c5446dabca4c3 509 Pfam PF01554 MatE 236 380 1.2E-6 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL543_03750 26f2edbe04814660bea4a07865c6eaf2 425 SUPERFAMILY SSF109604 236 402 2.51E-30 T 11-10-2018 AL543_03750 26f2edbe04814660bea4a07865c6eaf2 425 SUPERFAMILY SSF109604 15 184 5.65E-17 T 11-10-2018 AL543_03750 26f2edbe04814660bea4a07865c6eaf2 425 Gene3D G3DSA:1.10.3210.10 225 415 7.0E-52 T 11-10-2018 AL543_03750 26f2edbe04814660bea4a07865c6eaf2 425 Pfam PF01966 HD domain 244 365 2.0E-18 T 11-10-2018 IPR006674 HD domain AL543_03750 26f2edbe04814660bea4a07865c6eaf2 425 SMART SM00471 26 155 22.0 T 11-10-2018 IPR003607 HD/PDEase domain AL543_03750 26f2edbe04814660bea4a07865c6eaf2 425 SMART SM00471 240 375 3.9E-10 T 11-10-2018 IPR003607 HD/PDEase domain AL543_03750 26f2edbe04814660bea4a07865c6eaf2 425 Gene3D G3DSA:1.10.3210.10 15 195 1.7E-18 T 11-10-2018 AL543_17300 5d72c9f9deea3d460f3870301a233798 382 Pfam PF12698 ABC-2 family transporter protein 16 368 1.3E-42 T 11-10-2018 AL543_07385 51fdb69e69cffbb126b053908f0757e9 337 Pfam PF01435 Peptidase family M48 158 330 4.8E-24 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AL543_11890 74a500ab877f07d19e171170760fb5ba 86 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 6 83 1.6E-25 T 11-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 AL543_11890 74a500ab877f07d19e171170760fb5ba 86 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 10 80 9.4E-21 T 11-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 AL543_11890 74a500ab877f07d19e171170760fb5ba 86 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 1 86 34.076 T 11-10-2018 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3 AL543_16585 4bd01fbb07760dda4b2d302b77477912 263 Gene3D G3DSA:1.10.530.10 119 259 1.0E-13 T 11-10-2018 AL543_16585 4bd01fbb07760dda4b2d302b77477912 263 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 120 257 6.7E-18 T 11-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 AL543_15885 24977623c0470fe81fb5ca172a2177d0 338 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 61 332 8.3E-72 T 11-10-2018 IPR006507 Uncharacterised protein family UPF0283 AL543_15885 24977623c0470fe81fb5ca172a2177d0 338 Pfam PF05128 Domain of unknown function (DUF697) 174 332 4.4E-49 T 11-10-2018 IPR021147 Protein of unknown function DUF697 AL543_14315 a6ed45bf78ce5e95cffc90b8354e8bb5 704 Pfam PF05170 AsmA family 1 595 4.9E-158 T 11-10-2018 IPR007844 AsmA AL543_06270 e8c3949fed99f447c853da2080ebd962 77 Pfam PF04400 (Na+)-NQR maturation NqrM 22 63 1.1E-21 T 11-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM AL543_18735 780f15643a08bb8af62d835168557fb1 325 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 111 315 4.2E-9 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL543_18735 780f15643a08bb8af62d835168557fb1 325 Gene3D G3DSA:3.60.10.10 102 325 1.2E-20 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AL543_18735 780f15643a08bb8af62d835168557fb1 325 SUPERFAMILY SSF56219 97 322 1.31E-23 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AL543_13835 d1755bb30366b99bb4f85e3508236311 230 Gene3D G3DSA:1.25.40.10 51 230 3.1E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL543_16015 cab8cb817b5e6ca82b3ec9dd7cc794f6 183 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 39 174 1.8E-15 T 11-10-2018 IPR009936 Protein of unknown function DUF1468 AL543_05360 cbb03d4cedd5f612c3a0801a662bfc80 165 Gene3D G3DSA:3.40.630.30 2 162 2.2E-39 T 11-10-2018 AL543_05360 cbb03d4cedd5f612c3a0801a662bfc80 165 SUPERFAMILY SSF55729 3 160 2.09E-35 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL543_05360 cbb03d4cedd5f612c3a0801a662bfc80 165 Pfam PF00583 Acetyltransferase (GNAT) family 40 136 4.6E-18 T 11-10-2018 IPR000182 GNAT domain AL543_09725 69d2bae036ef917701e28bcf2519a69a 184 Pfam PF11355 Protein of unknown function (DUF3157) 7 183 2.0E-54 T 11-10-2018 IPR021501 Protein of unknown function DUF3157 AL543_02840 fc0b8d79d0498bdfbb76cfdd86187ff7 316 Pfam PF01032 FecCD transport family 11 312 8.2E-53 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AL543_02840 fc0b8d79d0498bdfbb76cfdd86187ff7 316 Gene3D G3DSA:1.10.3470.10 4 315 3.7E-57 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AL543_02840 fc0b8d79d0498bdfbb76cfdd86187ff7 316 SUPERFAMILY SSF81345 7 313 3.66E-58 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AL543_05990 fa6322166e3e0ee8859afa7ae36d63d9 419 Pfam PF12704 MacB-like periplasmic core domain 23 249 2.1E-12 T 11-10-2018 IPR025857 MacB-like periplasmic core domain AL543_05990 fa6322166e3e0ee8859afa7ae36d63d9 419 Pfam PF02687 FtsX-like permease family 312 409 1.6E-7 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AL543_21350 fbfdac5c7f89a483949c24b586e43ca4 43 Pfam PF11665 Protein of unknown function (DUF3265) 12 39 2.5E-13 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL543_08460 a8424045c69c5649ce7ac348b28bb7da 252 Pfam PF01203 Type II secretion system (T2SS), protein N 37 247 2.1E-58 T 11-10-2018 IPR022792 Type II secretion system, protein N AL543_13045 1ad50918f6221ef0603e0e12a6448989 446 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 12 356 1.5E-138 T 11-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 AL543_13045 1ad50918f6221ef0603e0e12a6448989 446 Pfam PF02601 Exonuclease VII, large subunit 127 440 1.8E-103 T 11-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 AL543_13045 1ad50918f6221ef0603e0e12a6448989 446 Pfam PF13742 OB-fold nucleic acid binding domain 11 104 2.2E-29 T 11-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 AL543_13045 1ad50918f6221ef0603e0e12a6448989 446 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 8 444 31.894 T 11-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 AL543_01425 06ca97e715826828de7937ee00e94137 210 Hamap MF_00789 UPF0319 protein YccT [yccT]. 5 209 28.891 T 11-10-2018 IPR018635 Uncharacterised protein family UPF0319 AL543_01425 06ca97e715826828de7937ee00e94137 210 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 24 204 2.3E-52 T 11-10-2018 IPR018635 Uncharacterised protein family UPF0319 AL543_10435 8ffdd2343dde878a819d1308168eda9e 205 Pfam PF16357 Putative PepSY_TM-like 13 195 2.0E-13 T 11-10-2018 IPR032307 Putative PepSY TM-like protein AL543_17720 5f6bb03826eb7afe6efddff4929c2c39 129 Pfam PF11042 Protein of unknown function (DUF2750) 23 122 5.2E-37 T 11-10-2018 IPR021284 Protein of unknown function DUF2750 AL543_18870 bcb59f5346eb4fc483f14796b0fd2dcd 619 Pfam PF13624 SurA N-terminal domain 1 166 1.3E-51 T 11-10-2018 AL543_18870 bcb59f5346eb4fc483f14796b0fd2dcd 619 SUPERFAMILY SSF109998 39 248 3.14E-39 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily AL543_18870 bcb59f5346eb4fc483f14796b0fd2dcd 619 SUPERFAMILY SSF54534 224 361 1.77E-29 T 11-10-2018 AL543_18870 bcb59f5346eb4fc483f14796b0fd2dcd 619 Pfam PF13616 PPIC-type PPIASE domain 262 362 3.3E-24 T 11-10-2018 AL543_18870 bcb59f5346eb4fc483f14796b0fd2dcd 619 Gene3D G3DSA:3.10.50.40 262 387 7.8E-33 T 11-10-2018 AL543_02870 ca9e8d31808215957b672955268e27c8 98 Gene3D G3DSA:2.40.360.20 3 89 2.3E-6 T 11-10-2018 AL543_07020 c897d7a68b2c5ebc0778f8717d8b1b1a 250 Pfam PF16537 Type II secretion system protein B 185 244 4.3E-23 T 11-10-2018 IPR032389 Type II secretion system protein B AL543_07170 08977b689ba30c9370db16d9a87a7094 86 Pfam PF03937 Flavinator of succinate dehydrogenase 7 77 2.0E-24 T 11-10-2018 IPR005631 Flavinator of succinate dehydrogenase AL543_07170 08977b689ba30c9370db16d9a87a7094 86 Gene3D G3DSA:1.10.150.250 1 86 3.0E-39 T 11-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily AL543_07170 08977b689ba30c9370db16d9a87a7094 86 SUPERFAMILY SSF109910 3 79 2.75E-26 T 11-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily AL543_02595 beb3bcaf674fcba5ed25590e855b79ad 167 Pfam PF13957 Toxin YafO, type II toxin-antitoxin system 55 122 3.9E-7 T 11-10-2018 IPR020353 mRNA interferase toxin YafO AL543_00080 909f2e3484d804291730cf3373ab4c6c 153 SUPERFAMILY SSF160631 39 141 9.29E-5 T 11-10-2018 AL543_21330 c2894ba8cba83480d52980ba1ac3fc53 48 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 2.3E-14 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL543_10740 651e8deab8ba54285982ac37e5ddce82 382 Gene3D G3DSA:2.70.70.10 242 382 4.6E-33 T 11-10-2018 IPR011055 Duplicated hybrid motif AL543_10740 651e8deab8ba54285982ac37e5ddce82 382 SUPERFAMILY SSF51261 172 380 5.75E-47 T 11-10-2018 IPR011055 Duplicated hybrid motif AL543_10740 651e8deab8ba54285982ac37e5ddce82 382 Pfam PF01551 Peptidase family M23 283 376 8.4E-23 T 11-10-2018 IPR016047 Peptidase M23 AL543_16940 99514ecfcec994810cbdf9173038b822 263 Pfam PF04116 Fatty acid hydroxylase superfamily 89 225 6.6E-27 T 11-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 AL543_08935 92a51b8a2d4ad98bab3bc6a7deaba3d2 242 Gene3D G3DSA:3.40.50.10090 32 161 1.2E-64 T 11-10-2018 AL543_08935 92a51b8a2d4ad98bab3bc6a7deaba3d2 242 SUPERFAMILY SSF69618 1 240 1.57E-48 T 11-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL543_08935 92a51b8a2d4ad98bab3bc6a7deaba3d2 242 Gene3D G3DSA:3.40.50.10090 4 240 1.2E-64 T 11-10-2018 AL543_08935 92a51b8a2d4ad98bab3bc6a7deaba3d2 242 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 237 7.1E-32 T 11-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL543_10735 7fe6b68731027e2464b86c1693ea7d19 319 SUPERFAMILY SSF64182 5 318 1.05E-40 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily AL543_20495 1380a19ac24554e3bc059f4ada5e299f 248 Gene3D G3DSA:1.10.150.690 31 121 3.2E-10 T 11-10-2018 AL543_20495 1380a19ac24554e3bc059f4ada5e299f 248 Pfam PF09836 Putative DNA-binding domain 32 89 1.2E-5 T 11-10-2018 IPR018640 Putative DNA-binding domain, bacteria AL543_05335 d4a1c378c41745248f2c34e80766df1a 249 Pfam PF02498 BRO family, N-terminal domain 19 100 1.6E-16 T 11-10-2018 IPR003497 BRO N-terminal domain AL543_05335 d4a1c378c41745248f2c34e80766df1a 249 SMART SM01040 17 100 2.7E-22 T 11-10-2018 IPR003497 BRO N-terminal domain AL543_04000 63a8b6595dd3eb88a1d7e82cb142fad5 314 Pfam PF14491 Protein of unknown function (DUF4435) 29 242 2.2E-17 T 11-10-2018 IPR029492 Domain of unknown function DUF4435 AL543_16680 54989152270e88082f49d62e52a4c352 104 Pfam PF12321 Protein of unknown function (DUF3634) 2 101 7.2E-39 T 11-10-2018 IPR022090 Protein of unknown function DUF3634 AL543_07605 105ee87bfb99a10797f4991d6a42aebf 1254 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 917 1253 6.1E-63 T 11-10-2018 IPR007452 Translocation and assembly module TamB AL543_19905 c5fec6122c9b09d92db39e6420926710 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 3.0E-16 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AL543_19905 c5fec6122c9b09d92db39e6420926710 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 3.0E-16 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AL543_19905 c5fec6122c9b09d92db39e6420926710 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 3.0E-16 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AL543_19905 c5fec6122c9b09d92db39e6420926710 89 PIRSF PIRSF004669 1 89 1.8E-29 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AL543_19905 c5fec6122c9b09d92db39e6420926710 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 7.5E-34 T 11-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 AL543_19905 c5fec6122c9b09d92db39e6420926710 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 8.9E-28 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AL543_12375 fcb21fdb39a4877893efd861e336b754 445 TIGRFAM TIGR00797 matE: MATE efflux family protein 16 411 3.1E-51 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL543_12375 fcb21fdb39a4877893efd861e336b754 445 Pfam PF01554 MatE 247 399 1.3E-10 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL543_12375 fcb21fdb39a4877893efd861e336b754 445 Pfam PF01554 MatE 16 177 1.4E-21 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL543_12375 fcb21fdb39a4877893efd861e336b754 445 PIRSF PIRSF006603 1 443 3.1E-67 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL543_14645 76615c55d82e0462e2f72db9b54abd59 146 Gene3D G3DSA:3.40.50.510 1 144 8.4E-34 T 11-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 AL543_14645 76615c55d82e0462e2f72db9b54abd59 146 SUPERFAMILY SSF53062 1 126 1.7E-33 T 11-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 AL543_14645 76615c55d82e0462e2f72db9b54abd59 146 Pfam PF03610 PTS system fructose IIA component 4 114 2.7E-29 T 11-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AL543_18000 79d70a53c2eb1ce148db48f48a5cf799 94 Pfam PF07383 Protein of unknown function (DUF1496) 35 79 7.4E-22 T 11-10-2018 IPR009971 Protein of unknown function DUF1496 AL543_01970 5189939bf7d09a7ffafd2e10fe490407 242 Pfam PF07670 Nucleoside recognition 85 179 3.3E-11 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AL543_17810 919956cefd035d880aefb2c85d1ad010 139 Pfam PF03061 Thioesterase superfamily 26 98 7.3E-20 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AL543_17810 919956cefd035d880aefb2c85d1ad010 139 SUPERFAMILY SSF54637 9 129 3.95E-38 T 11-10-2018 IPR029069 HotDog domain superfamily AL543_17810 919956cefd035d880aefb2c85d1ad010 139 Gene3D G3DSA:3.10.129.10 1 138 1.7E-39 T 11-10-2018 AL543_01485 db63b09ed09b491c523a193b6e112f58 308 Pfam PF04018 Domain of unknown function (DUF368) 18 262 1.3E-96 T 11-10-2018 IPR007163 Protein of unknown function DUF368 AL543_20525 80171c7a535b52d0ec5c03be4104924a 156 Pfam PF00075 RNase H 3 142 1.9E-53 T 11-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 AL543_20525 80171c7a535b52d0ec5c03be4104924a 156 Gene3D G3DSA:3.30.420.10 1 155 7.6E-60 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AL543_20525 80171c7a535b52d0ec5c03be4104924a 156 SUPERFAMILY SSF53098 3 143 2.15E-57 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL543_20525 80171c7a535b52d0ec5c03be4104924a 156 Hamap MF_00042 Ribonuclease H [rnhA]. 2 149 36.292 T 11-10-2018 IPR022892 Ribonuclease HI GO:0004523 AL543_19245 7958696415760382968832666d6b998c 95 Pfam PF07023 Protein of unknown function (DUF1315) 4 81 2.7E-28 T 11-10-2018 IPR009749 Protein of unknown function DUF1315 AL543_21315 bea10f7f5e299961e7e1d6b3cb5d7cc6 66 Pfam PF11665 Protein of unknown function (DUF3265) 2 29 6.6E-15 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL543_15240 84ec84f2bcd0474032c02f474a69d5af 253 Pfam PF02698 DUF218 domain 71 207 8.8E-20 T 11-10-2018 IPR003848 Domain of unknown function DUF218 AL543_11935 9d8472334205dfa58ac72c272de68c23 264 Pfam PF01578 Cytochrome C assembly protein 37 262 8.0E-46 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AL543_11750 d4a7ba655713aec0744deb945a76070c 94 Gene3D G3DSA:1.20.5.400 22 63 6.9E-9 T 11-10-2018 AL543_11750 d4a7ba655713aec0744deb945a76070c 94 Pfam PF04977 Septum formation initiator 11 89 1.1E-27 T 11-10-2018 IPR007060 Septum formation initiator FtsL/DivIC AL543_11750 d4a7ba655713aec0744deb945a76070c 94 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 35.712 T 11-10-2018 IPR023081 Cell division protein FtsB AL543_19870 195b6eee384acafb14fab31863081632 200 Pfam PF03458 UPF0126 domain 5 79 4.2E-20 T 11-10-2018 IPR005115 Uncharacterised domain UPF0126 AL543_19870 195b6eee384acafb14fab31863081632 200 Pfam PF03458 UPF0126 domain 92 163 4.2E-21 T 11-10-2018 IPR005115 Uncharacterised domain UPF0126 AL543_14000 56c693e1806629ce5f9ccc7d6f22d23e 273 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 182 228 3.3E-5 T 11-10-2018 IPR018635 Uncharacterised protein family UPF0319 AL543_01895 9c29a767731fbb8947e3a601de952334 278 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 66 198 2.1E-43 T 11-10-2018 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 AL543_08575 88bb3963fee6a0cc9036d8ad0a65a1fb 196 Pfam PF13511 Domain of unknown function (DUF4124) 12 74 4.3E-8 T 11-10-2018 IPR025392 Domain of unknown function DUF4124 AL543_11900 ca45f182afdbeb5386018236e13bb2f9 376 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 19 370 1.4E-171 T 11-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 AL543_11900 ca45f182afdbeb5386018236e13bb2f9 376 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 20 374 3.4E-159 T 11-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 AL543_11900 ca45f182afdbeb5386018236e13bb2f9 376 PIRSF PIRSF015658 1 376 6.2E-179 T 11-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 AL543_02715 bd4597f300b6d44ebe3b2849eed8ea22 169 Pfam PF10789 Phage RNA polymerase binding, RpbA 86 155 7.7E-5 T 11-10-2018 IPR019725 Bacteriophage T4, P15K, RNA polymerase binding AL543_05465 01ba4660ccb396d44493e66007dca432 97 Gene3D G3DSA:3.40.1620.40 16 78 1.1E-10 T 11-10-2018 AL543_05465 01ba4660ccb396d44493e66007dca432 97 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 16 67 9.9E-13 T 11-10-2018 AL543_05465 01ba4660ccb396d44493e66007dca432 97 SUPERFAMILY SSF143120 14 85 7.72E-17 T 11-10-2018 IPR036165 YefM-like superfamily AL543_05465 01ba4660ccb396d44493e66007dca432 97 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 14 78 1.7E-16 T 11-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AL543_08615 9d0830de1cc6872f65a5f39b39240d6d 201 Gene3D G3DSA:3.30.420.470 7 195 1.0E-13 T 11-10-2018 AL543_08615 9d0830de1cc6872f65a5f39b39240d6d 201 Pfam PF13358 DDE superfamily endonuclease 31 170 3.2E-28 T 11-10-2018 IPR038717 Tc1-like transposase, DDE domain AL543_08535 f64b239cca05bb4111903bd1844b8088 628 Pfam PF05170 AsmA family 1 569 8.5E-159 T 11-10-2018 IPR007844 AsmA AL543_19780 4ab77af882607a7309b8ceac717244d0 249 Pfam PF08907 Domain of unknown function (DUF1853) 38 215 4.0E-35 T 11-10-2018 IPR015003 Protein of unknown function DUF1853 AL543_19435 643d54dd14d964750cea12592ac13600 291 SUPERFAMILY SSF103481 194 290 1.11E-7 T 11-10-2018 AL543_19435 643d54dd14d964750cea12592ac13600 291 SUPERFAMILY SSF103481 38 143 6.41E-8 T 11-10-2018 AL543_05375 f7229cbadd95ffeb8d83e950694bded0 115 Pfam PF11225 Protein of unknown function (DUF3024) 60 114 1.0E-21 T 11-10-2018 IPR021388 Bacteriophage 933W, L0084 AL543_16740 382960e0f5e4a606981e020fd3284f25 78 Pfam PF11197 Protein of unknown function (DUF2835) 10 76 1.2E-26 T 11-10-2018 IPR021363 Protein of unknown function DUF2835 AL543_06770 e7f799129d864611fb4c6439fcec93a8 139 Pfam PF05258 Protein of unknown function (DUF721) 25 68 8.1E-6 T 11-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 AL543_03470 0ebd1f6c44bbc3947a0c6a727afaeed4 174 Gene3D G3DSA:1.20.950.20 24 162 7.3E-9 T 11-10-2018 AL543_03470 0ebd1f6c44bbc3947a0c6a727afaeed4 174 Pfam PF01292 Prokaryotic cytochrome b561 7 155 8.4E-19 T 11-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AL543_03470 0ebd1f6c44bbc3947a0c6a727afaeed4 174 SUPERFAMILY SSF81342 3 171 1.73E-29 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AL543_16635 ae5748d5035e2cf8e1a903f82ea82e56 54 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 6 45 2.9E-14 T 11-10-2018 IPR008621 Cbb3-type cytochrome oxidase component AL543_18975 fd13bf5d0d7f54bfb1de2aea757378bb 206 Pfam PF01810 LysE type translocator 15 203 3.1E-24 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL543_18975 fd13bf5d0d7f54bfb1de2aea757378bb 206 PIRSF PIRSF006324 1 206 5.0E-42 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL543_16975 43a0939d0cc9ac4e31528d42925a2102 328 Pfam PF11279 Protein of unknown function (DUF3080) 28 323 2.0E-87 T 11-10-2018 IPR021431 Protein of unknown function DUF3080 AL543_09625 fbf5ec2b74864989893a73f2b9f89793 184 Pfam PF01169 Uncharacterized protein family UPF0016 103 178 2.0E-20 T 11-10-2018 IPR001727 Gdt1 family AL543_09625 fbf5ec2b74864989893a73f2b9f89793 184 Pfam PF01169 Uncharacterized protein family UPF0016 7 80 3.6E-20 T 11-10-2018 IPR001727 Gdt1 family AL543_05185 60ecbff5a814df6df1220c4dfe604e85 59 Pfam PF04875 Protein of unknown function, DUF645 1 59 4.6E-35 T 11-10-2018 IPR006959 Protein of unknown function DUF645 AL543_15475 4f41b8c556a75e3f6a312a6210b06ddf 224 Pfam PF04172 LrgB-like family 6 218 5.6E-73 T 11-10-2018 IPR007300 CidB/LrgB family AL543_02375 9058ac9b8f6dfb3aa314e4bdfe272abc 547 Pfam PF13584 Oxygen tolerance 22 448 9.1E-75 T 11-10-2018 IPR025738 Aerotolerance-related protein BatD AL543_15100 ef8cb3eda07ccfbd709ecbba0fd56850 421 Pfam PF06097 Bacterial protein of unknown function (DUF945) 3 409 3.0E-45 T 11-10-2018 IPR010352 Protein of unknown function DUF945 AL543_06600 37e280456a37811a5c6edcf2d32b9f9e 77 Pfam PF12065 Protein of unknown function (DUF3545) 19 75 9.0E-24 T 11-10-2018 IPR021932 Protein of unknown function DUF3545 AL543_03650 1a4384cc77477638a151c8399d190bbe 152 Pfam PF01478 Type IV leader peptidase family 14 105 1.9E-5 T 11-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 AL543_04600 8782c75951e3f48738618d74900270a5 173 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 26 152 9.3E-27 T 11-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ AL543_04150 53ed0b25e27c6697ea5138c2fed58d6f 287 Pfam PF02698 DUF218 domain 9 131 1.6E-13 T 11-10-2018 IPR003848 Domain of unknown function DUF218 AL543_16610 083d6d6d1d9b9e6d03b15939cead9cb5 224 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 8 211 9.3E-56 T 11-10-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain AL543_12385 2b3b69c86f5371933ab8670293e7f387 337 Pfam PF01136 Peptidase family U32 75 336 6.9E-70 T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AL543_12385 2b3b69c86f5371933ab8670293e7f387 337 ProSitePatterns PS01276 Peptidase family U32 signature. 163 181 - T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AL543_02835 b64cf76cc705337668d6e07b480b36ea 312 Gene3D G3DSA:1.10.3470.10 1 311 4.5E-59 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AL543_02835 b64cf76cc705337668d6e07b480b36ea 312 Pfam PF01032 FecCD transport family 9 306 2.5E-60 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AL543_02835 b64cf76cc705337668d6e07b480b36ea 312 SUPERFAMILY SSF81345 4 306 2.35E-61 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AL543_15540 53f0ed8f36bc6b2d2dcb452d6a0a882d 131 Pfam PF11042 Protein of unknown function (DUF2750) 28 128 3.3E-33 T 11-10-2018 IPR021284 Protein of unknown function DUF2750 AL543_18790 1bafc94082310a6ccb22d5fa65c18adc 458 Pfam PF04932 O-Antigen ligase 232 370 4.1E-20 T 11-10-2018 IPR007016 O-antigen ligase-related AL543_14040 24fe44ebd37cc8345c3c0d01bae1c9c3 182 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 162 5.1E-26 T 11-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 AL543_14040 24fe44ebd37cc8345c3c0d01bae1c9c3 182 SUPERFAMILY SSF56300 1 163 2.95E-37 T 11-10-2018 AL543_14040 24fe44ebd37cc8345c3c0d01bae1c9c3 182 Gene3D G3DSA:3.60.21.10 1 181 1.7E-65 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like AL543_14040 24fe44ebd37cc8345c3c0d01bae1c9c3 182 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 169 1.9E-33 T 11-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 AL543_08960 1e5802d37b568dc8b1417e48d6e03f06 182 Pfam PF04220 Der GTPase activator (YihI) 21 172 6.1E-44 T 11-10-2018 IPR007336 Der GTPase activator GO:0005096 AL543_08960 1e5802d37b568dc8b1417e48d6e03f06 182 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 175 16.298 T 11-10-2018 IPR007336 Der GTPase activator GO:0005096 AL543_21065 ea71017dd5bcf6f8f7261461274e908c 55 Pfam PF12493 Protein of unknown function (DUF3709) 34 55 6.2E-8 T 11-10-2018 IPR022178 Protein of unknown function DUF3709 AL543_20775 f590adeb8f97ce326990121da4e91354 38 Pfam PF11665 Protein of unknown function (DUF3265) 15 38 1.8E-10 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL543_02170 fb3a6680214f886c786e5a28e2716cda 86 Pfam PF11216 Protein of unknown function (DUF3012) 20 51 6.1E-18 T 11-10-2018 IPR021379 Protein of unknown function DUF3012 AL543_02170 fb3a6680214f886c786e5a28e2716cda 86 Pfam PF11216 Protein of unknown function (DUF3012) 55 86 2.4E-18 T 11-10-2018 IPR021379 Protein of unknown function DUF3012 AL543_02145 385c040f54d4d7b000a12def28e23985 420 Pfam PF06812 ImpA, N-terminal, type VI secretion system 26 100 6.0E-8 T 11-10-2018 IPR010657 ImpA, N-terminal AL543_03675 9bebde04718eed32c62de8f6398233dc 403 Gene3D G3DSA:3.40.50.300 152 384 3.6E-16 T 11-10-2018 AL543_03675 9bebde04718eed32c62de8f6398233dc 403 SUPERFAMILY SSF52540 155 364 5.32E-16 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_03675 9bebde04718eed32c62de8f6398233dc 403 Pfam PF13614 AAA domain 155 305 2.8E-7 T 11-10-2018 IPR025669 AAA domain AL543_12380 d670f4e57378ccc89e098137c92f6392 292 Pfam PF01136 Peptidase family U32 82 234 3.5E-13 T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AL543_01335 42007e5bcb88c4021776e7a83067b7a1 92 Pfam PF11686 Protein of unknown function (DUF3283) 27 87 1.6E-32 T 11-10-2018 IPR021700 Protein of unknown function DUF3283 AL543_00290 cb7ce33bf66443fe648f1f21269431a3 60 SUPERFAMILY SSF46955 9 59 2.93E-5 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AL543_11385 00e725aa06454a44d0daea2af7c2ec4a 253 Pfam PF06738 Putative threonine/serine exporter 10 247 2.6E-68 T 11-10-2018 IPR010619 Putative threonine/serine exporter AL543_20115 567cb13d2ed13a6324b59fde689adae7 373 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 18 249 2.5E-68 T 11-10-2018 IPR018642 Protein of unknown function DUF2066 AL543_08755 fbc8e2e85ddcd9d314f42391543b7f43 440 SUPERFAMILY SSF52540 3 286 2.28E-7 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_08755 fbc8e2e85ddcd9d314f42391543b7f43 440 Pfam PF13166 AAA domain 223 426 1.7E-11 T 11-10-2018 IPR026866 Protein CR006, P-loop domain AL543_08175 c12377b89d7691a0f8c58ae1b7655873 205 Gene3D G3DSA:1.10.10.10 2 86 7.3E-10 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL543_08175 c12377b89d7691a0f8c58ae1b7655873 205 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 46 3.4E-7 T 11-10-2018 AL543_08175 c12377b89d7691a0f8c58ae1b7655873 205 SUPERFAMILY SSF46785 4 183 4.8E-37 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL543_17550 0be8b89f585511385339a688d9c77927 247 Pfam PF06629 MltA-interacting protein MipA 33 245 4.2E-33 T 11-10-2018 IPR010583 MltA-interacting MipA AL543_07680 c6d67786fa45f3094c441993fafeb62f 189 Gene3D G3DSA:2.60.120.10 1 140 2.5E-14 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL543_07680 c6d67786fa45f3094c441993fafeb62f 189 SUPERFAMILY SSF51206 15 137 1.44E-14 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like AL543_21070 4599db851565be297013f7f0c09ce224 77 Pfam PF12493 Protein of unknown function (DUF3709) 34 66 3.8E-14 T 11-10-2018 IPR022178 Protein of unknown function DUF3709 AL543_02590 bdbe96deb8dae0d0ca61d4c52e618c31 83 Pfam PF04606 Ogr/Delta-like zinc finger 5 50 3.8E-13 T 11-10-2018 IPR007684 Zinc finger, Ogr/Delta-type AL543_12820 704841e72700413d5d3fa7d1654cc9a0 466 Pfam PF16325 Peptidase family U32 C-terminal domain 371 452 8.0E-21 T 11-10-2018 IPR032525 Peptidase family U32, C-terminal AL543_12820 704841e72700413d5d3fa7d1654cc9a0 466 Pfam PF01136 Peptidase family U32 80 355 6.7E-97 T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AL543_12820 704841e72700413d5d3fa7d1654cc9a0 466 ProSitePatterns PS01276 Peptidase family U32 signature. 167 185 - T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AL543_12820 704841e72700413d5d3fa7d1654cc9a0 466 Gene3D G3DSA:2.40.30.10 367 453 4.9E-9 T 11-10-2018 AL543_01975 5d6c19b3f927d51e37453fa5a6ce778d 155 Pfam PF07670 Nucleoside recognition 31 124 8.7E-7 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AL543_21135 6601c61ed2662f17569050882c0a0b84 40 Pfam PF04875 Protein of unknown function, DUF645 1 40 1.5E-22 T 11-10-2018 IPR006959 Protein of unknown function DUF645 AL543_19025 122c4f4f86f52875bf459df772d4575d 432 PIRSF PIRSF028704 1 384 1.2E-125 T 11-10-2018 IPR014550 Uncharacterised conserved protein UCP028704, OpgC AL543_19025 122c4f4f86f52875bf459df772d4575d 432 Pfam PF10129 OpgC protein 3 361 1.3E-85 T 11-10-2018 IPR014550 Uncharacterised conserved protein UCP028704, OpgC AL543_17890 7821621705003eed899f65a870a0285b 287 Pfam PF02698 DUF218 domain 89 251 6.9E-28 T 11-10-2018 IPR003848 Domain of unknown function DUF218 AL543_05830 baac68af624e25e0fbe24507e2cee431 186 Pfam PF00924 Mechanosensitive ion channel 52 162 3.4E-10 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AL543_05830 baac68af624e25e0fbe24507e2cee431 186 SUPERFAMILY SSF50182 98 163 9.15E-8 T 11-10-2018 IPR010920 LSM domain superfamily AL543_11090 e47d8db9cd81655c030b33c5e8209cbc 444 Pfam PF00999 Sodium/hydrogen exchanger family 22 416 4.8E-56 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AL543_05455 cd561274ed67a25cc1c694982163f1c8 99 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 7 92 1.5E-18 T 11-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AL543_05455 cd561274ed67a25cc1c694982163f1c8 99 Gene3D G3DSA:3.30.2310.20 1 96 4.3E-25 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily AL543_05455 cd561274ed67a25cc1c694982163f1c8 99 PIRSF PIRSF029218 1 97 1.7E-30 T 11-10-2018 IPR028344 Toxin-antitoxin system, toxin component ParE1/4 AL543_19930 a6fa26aa0ba4738d4c83ac55041dfa6b 166 Pfam PF03748 Flagellar basal body-associated protein FliL 65 166 6.0E-21 T 11-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 AL543_14685 d08aa4c182d6c853e1a3b27174f5b27b 276 Pfam PF02517 CAAX protease self-immunity 174 263 1.1E-11 T 11-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 AL543_19250 b01e0c825450c652175f142adcdecb01 274 Pfam PF11207 Protein of unknown function (DUF2989) 16 218 1.8E-72 T 11-10-2018 IPR021372 Protein of unknown function DUF2989 AL543_19085 304c34a4f8dc42e624ba6b3847426add 163 Gene3D G3DSA:2.40.128.640 55 163 8.0E-41 T 11-10-2018 AL543_19085 304c34a4f8dc42e624ba6b3847426add 163 Pfam PF04170 NlpE N-terminal domain 68 153 8.8E-30 T 11-10-2018 IPR007298 Copper resistance lipoprotein NlpE AL543_08815 da1c2444b5b09ed769286fa3f4210f84 88 Pfam PF06611 Protein of unknown function (DUF1145) 4 59 4.5E-18 T 11-10-2018 IPR009525 Protein of unknown function DUF1145 AL543_02390 da0eb8c671f26a6911433810dc593a60 162 Pfam PF14316 Domain of unknown function (DUF4381) 10 146 1.1E-35 T 11-10-2018 IPR025489 Protein of unknown function (DUF4381 AL543_12565 3dd09fbd707c8a6e2344482c27329012 113 Pfam PF10973 Protein of unknown function (DUF2799) 28 108 5.3E-23 T 11-10-2018 IPR021242 Protein of unknown function DUF2799 AL543_02555 6e1582538a37b6e319d5f592d7f69fae 179 Pfam PF06892 Phage regulatory protein CII (CP76) 12 169 1.3E-43 T 11-10-2018 IPR009679 Bacteriophage 186, CII AL543_11390 a5d2ee94c7ce3afe91860f3030ec7c4c 161 Pfam PF12821 Threonine/Serine exporter, ThrE 17 151 6.7E-37 T 11-10-2018 IPR024528 Threonine/Serine exporter, ThrE AL543_07695 fba382842b445d419483694c9b0d11c8 297 SUPERFAMILY SSF103481 40 141 1.57E-14 T 11-10-2018 AL543_07695 fba382842b445d419483694c9b0d11c8 297 Pfam PF00892 EamA-like transporter family 143 268 1.7E-10 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL543_07695 fba382842b445d419483694c9b0d11c8 297 Pfam PF00892 EamA-like transporter family 8 137 3.4E-11 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL543_07695 fba382842b445d419483694c9b0d11c8 297 SUPERFAMILY SSF103481 178 268 3.79E-12 T 11-10-2018 AL543_16865 1b8c4947d8c6c9537a415f3328239433 213 Pfam PF11748 Protein of unknown function (DUF3306) 28 138 9.0E-20 T 11-10-2018 IPR021735 Protein of unknown function DUF3306 AL543_08055 a27d63619b4ac18e6b2a76e6b92db0b5 87 Pfam PF12292 Protein of unknown function (DUF3624) 4 82 1.8E-37 T 11-10-2018 IPR022072 Protein of unknown function DUF3624 AL543_19865 a8be505432acd5ae1c1900ccad3b4e78 176 Pfam PF04315 Elongation factor P hydroxylase 11 172 4.0E-74 T 11-10-2018 IPR007411 Elongation factor P hydroxylase AL543_16300 304af1964cade75aa44948bd776a55b5 51 PIRSF PIRSF037205 1 50 2.1E-22 T 11-10-2018 IPR017136 Uncharacterised conserved protein UCP037205 AL543_16300 304af1964cade75aa44948bd776a55b5 51 Pfam PF10013 Uncharacterized protein conserved in bacteria (DUF2256) 5 44 7.9E-20 T 11-10-2018 IPR017136 Uncharacterised conserved protein UCP037205 AL543_20575 75a42ca388f761cf4fdc43426a0567ba 55 Gene3D G3DSA:3.90.180.10 1 55 5.9E-12 T 11-10-2018 AL543_08705 ee9d00d9e6ce074a3e3cbda7f120b867 213 Pfam PF11726 Inovirus Gp2 37 211 3.0E-55 T 11-10-2018 AL543_08940 c438b36eb4d01124f49d7b0e15d68351 403 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 62 391 5.4E-104 T 11-10-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX AL543_03900 405d839f7ec228526afee07ed40d6c24 61 Pfam PF11127 Protein of unknown function (DUF2892) 2 56 1.2E-14 T 11-10-2018 IPR021309 Protein of unknown function DUF2892 AL543_14635 afc11b2069b13360f88f6aa916fc099b 258 Pfam PF03609 PTS system sorbose-specific iic component 5 236 4.6E-72 T 11-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 AL543_20745 6780b526468711e749f74930088ae1a7 48 Pfam PF11665 Protein of unknown function (DUF3265) 21 48 8.1E-12 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL543_17515 915ee2af1f83ad42057bbb641526b97c 133 Pfam PF12614 Ribosome recycling factor 6 130 2.1E-55 T 11-10-2018 IPR022253 Ribosome recycling factor. bacterial AL543_18580 4e341171d250827e0970c8a2c30c724d 268 Pfam PF10972 Peptidoglycan-binding protein, CsiV 19 266 5.7E-63 T 11-10-2018 IPR021241 Peptidoglycan-binding protein, CsiV AL543_19860 f7d37c01bf58516f0bf9eb58aca7299d 87 Pfam PF08891 YfcL protein 4 84 1.5E-32 T 11-10-2018 IPR014987 Uncharacterised protein family YfcL AL543_21220 7222ec000eaa76a60c78f624fcd438db 49 Pfam PF11665 Protein of unknown function (DUF3265) 22 49 4.4E-11 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL543_15905 3c4f671ff5f8708f57f3a5749bb55982 157 Pfam PF11163 Protein of unknown function (DUF2947) 3 154 1.6E-71 T 11-10-2018 IPR021334 Protein of unknown function DUF2947 AL543_04155 54eb26b86b7201969d8c88481ba49753 85 Pfam PF03891 Domain of unknown function (DUF333) 34 80 5.3E-18 T 11-10-2018 IPR005590 Protein of unknown function DUF333 AL543_06115 ea4d932d326f3902bdac9c1d68d2c9c6 280 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 238 264 - T 11-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 AL543_06115 ea4d932d326f3902bdac9c1d68d2c9c6 280 Pfam PF01148 Cytidylyltransferase family 2 280 1.0E-72 T 11-10-2018 AL543_09020 219199f04e13f5295422c2e0d9b7abf5 136 Pfam PF03748 Flagellar basal body-associated protein FliL 34 136 5.6E-19 T 11-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 AL543_16450 4a187d0744ad430493f8114be7f8fb81 317 Pfam PF03547 Membrane transport protein 163 308 2.9E-13 T 11-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 AL543_16450 4a187d0744ad430493f8114be7f8fb81 317 Pfam PF03547 Membrane transport protein 7 152 1.6E-14 T 11-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 AL543_19550 99df6319c6a8945a68bc08043295dea8 167 Pfam PF11993 Ribosomal S4P (gammaproteobacterial) 1 163 2.6E-64 T 11-10-2018 IPR021879 Ribosomal S4P (gammaproteobacterial) AL543_00700 a80d2dc70534c878d659b4e58c0c2fb5 192 SUPERFAMILY SSF51645 21 188 1.31E-17 T 11-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AL543_00700 a80d2dc70534c878d659b4e58c0c2fb5 192 Gene3D G3DSA:2.170.170.11 15 134 9.8E-28 T 11-10-2018 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AL543_07280 574691302601da29a6c52a70c6ec8f37 266 Pfam PF04784 Protein of unknown function, DUF547 86 198 1.4E-24 T 11-10-2018 IPR006869 Domain of unknown function DUF547 AL543_15725 1e89af70911b726f2cbee646d94ddc9f 179 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 30 161 3.5E-28 T 11-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ AL543_04940 d09af67db868994e8905331d17840875 76 Gene3D G3DSA:1.20.1280.100 1 73 7.1E-35 T 11-10-2018 AL543_04940 d09af67db868994e8905331d17840875 76 Pfam PF09016 Pas factor saposin fold 1 76 9.1E-39 T 11-10-2018 IPR015106 Pas factor saposin domain AL543_01880 3be44146a92b4be65b44aaae49eddbdb 404 Pfam PF01566 Natural resistance-associated macrophage protein 49 371 8.3E-19 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 AL543_13310 31d0f579f68f88850573a088265e6094 227 PIRSF PIRSF028137 1 227 4.9E-101 T 11-10-2018 IPR016870 Uncharacterised conserved protein UCP028137, membrane AL543_02190 ac85c49c630dd2cfeb5e512c7a870121 333 Pfam PF02653 Branched-chain amino acid transport system / permease component 57 325 2.7E-53 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AL543_18100 8a29616765139e1a3d2abafa511cc4ed 406 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 17 61 7.2E-9 T 11-10-2018 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal AL543_09520 2f7aa14915bfe1fa84732462939d7777 144 Pfam PF00258 Flavodoxin 4 136 1.3E-21 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AL543_09520 2f7aa14915bfe1fa84732462939d7777 144 Gene3D G3DSA:3.40.50.360 1 144 1.1E-44 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL543_09520 2f7aa14915bfe1fa84732462939d7777 144 SUPERFAMILY SSF52218 2 144 4.19E-40 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL543_02625 fa2a5efdb48ef4779dc104dfd9d313f9 240 Pfam PF05944 Phage small terminase subunit 38 168 1.0E-36 T 11-10-2018 IPR010270 Bacteriophage P2, GpM GO:0003677|GO:0004519|GO:0019069 AL543_10250 22b2de87f1c2dd8bc101bb9c1338aa13 527 SUPERFAMILY SSF53448 21 227 3.98E-5 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL543_10250 22b2de87f1c2dd8bc101bb9c1338aa13 527 SUPERFAMILY SSF56112 341 509 7.58E-8 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AL543_02655 45cd23c7f4954aa3be232cdb31dbe5d0 152 Pfam PF10772 Protein of unknown function (DUF2597) 10 142 2.8E-48 T 11-10-2018 IPR019708 Bacteriophage HP1, Orf24 AL543_05315 f150feafc1c42e10adc9dbd3e7c0bd73 77 Pfam PF12493 Protein of unknown function (DUF3709) 34 66 1.1E-17 T 11-10-2018 IPR022178 Protein of unknown function DUF3709 AL543_17355 8518892c7ea99bf4bb40ade0f4091332 182 Pfam PF07209 Protein of unknown function (DUF1415) 6 173 2.9E-65 T 11-10-2018 IPR009858 Protein of unknown function DUF1415 AL543_21125 bde057ae998f8f29a686b1ab059cc5e5 50 Pfam PF11665 Protein of unknown function (DUF3265) 19 46 3.0E-17 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL543_04430 87c8ef45d5feea51810a683bf08d60cd 92 Pfam PF10115 Transcriptional activator HlyU 2 91 5.2E-38 T 11-10-2018 IPR018772 Transcription activator HlyU AL543_12225 2f94f388f17337cff516028621fef74f 361 Pfam PF01594 AI-2E family transporter 14 347 3.3E-55 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like AL543_18120 73958a76109f1317df6548ef8167f591 449 SUPERFAMILY SSF52540 153 437 2.16E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL543_13525 0d2e6ad3af3a18b04b188b67fb4ce9e3 528 Pfam PF03806 AbgT putative transporter family 19 526 3.5E-229 T 11-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 AL543_16870 3869a06c038806ed8e613dfee30b2f09 158 Pfam PF11749 Protein of unknown function (DUF3305) 56 148 7.8E-19 T 11-10-2018 IPR021736 Protein of unknown function DUF3305 AL543_20895 ec03e99c8549e0331528ded89545b0ba 40 Pfam PF11665 Protein of unknown function (DUF3265) 14 37 2.2E-8 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL543_07625 2d2c144a2fd790fdfad4b3fd5be1e123 96 Pfam PF10795 Protein of unknown function (DUF2607) 9 94 6.3E-39 T 11-10-2018 IPR019731 Protein of unknown function DUF2607 AL543_18940 9aa5ecf7613b49207639ef2104598d2d 156 SUPERFAMILY SSF56524 35 154 9.02E-10 T 11-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 AL543_20830 45e484d77f01742dde5e4ac664c40143 42 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 5.1E-17 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL543_21040 74358510e08785a68a7587756f94a300 77 Pfam PF12493 Protein of unknown function (DUF3709) 34 66 3.9E-17 T 11-10-2018 IPR022178 Protein of unknown function DUF3709 AL543_20890 61d47e530faeb8c9c4419544af2ae2da 77 Pfam PF12493 Protein of unknown function (DUF3709) 34 66 1.2E-19 T 11-10-2018 IPR022178 Protein of unknown function DUF3709 AL543_04435 6453f4e9ac594bfd99b1f62869f32acf 124 Pfam PF10719 Late competence development protein ComFB 8 83 6.8E-14 T 11-10-2018 IPR019657 Late competence development protein ComFB AL543_03690 dc3e3ca259fce3671de1249a3a06c2e0 291 Pfam PF00482 Type II secretion system (T2SS), protein F 153 279 1.8E-14 T 11-10-2018 IPR018076 Type II secretion system F domain AL543_04490 e346ff8896033b8e6f01858f67a96049 360 Pfam PF02163 Peptidase family M50 227 261 1.1E-6 T 11-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 AL543_07595 085899aa681be69841888f90a86f1056 117 Pfam PF10973 Protein of unknown function (DUF2799) 28 110 5.8E-18 T 11-10-2018 IPR021242 Protein of unknown function DUF2799 AL543_20030 3383a76c02618cefa21de274cf87d8ae 118 Pfam PF11169 Protein of unknown function (DUF2956) 9 113 1.1E-39 T 11-10-2018 IPR021339 Protein of unknown function DUF2956