locus-tag class description VM_00005 IPR003593 AAA+ ATPase domain VM_00005 IPR010921 Trp repressor/replication initiator VM_00005 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_00005 IPR038454 DnaA, N-terminal domain superfamily VM_00005 IPR024633 DnaA N-terminal domain VM_00005 IPR001957 Chromosomal replication control, initiator DnaA VM_00005 IPR020591 Chromosomal replication control, initiator DnaA-like VM_00005 IPR018312 Chromosomal replication control, initiator DnaA, conserved site VM_00005 IPR013317 Chromosomal replication initiator protein DnaA VM_00005 IPR013159 Chromosomal replication initiator, DnaA C-terminal VM_00010 IPR022637 DNA polymerase III, beta sliding clamp, central VM_00010 IPR001001 DNA polymerase III, beta sliding clamp VM_00010 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal VM_00010 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal VM_00015 IPR001238 DNA-binding, RecF VM_00015 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_00015 IPR003395 RecF/RecN/SMC, N-terminal VM_00015 IPR042174 DNA-binding RecF, domain 2 VM_00015 IPR018078 DNA-binding, RecF, conserved site VM_00020 IPR006171 TOPRIM domain VM_00020 IPR018522 DNA topoisomerase, type IIA, conserved site VM_00020 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 VM_00020 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal VM_00020 IPR013760 DNA topoisomerase, type IIA-like domain superfamily VM_00020 IPR041423 DNA gyrase subunit B insert domain VM_00020 IPR003594 Histidine kinase/HSP90-like ATPase VM_00020 IPR002288 DNA gyrase B subunit, C-terminal VM_00020 IPR001241 DNA topoisomerase, type IIA VM_00020 IPR011557 DNA gyrase, subunit B VM_00020 IPR034160 DNA gyrase subunit B, TOPRIM domain VM_00020 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VM_00020 IPR020568 Ribosomal protein S5 domain 2-type fold VM_00020 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VM_00035 IPR023728 Small heat shock protein IbpA VM_00035 IPR008978 HSP20-like chaperone VM_00035 IPR002068 Alpha crystallin/Hsp20 domain VM_00035 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain VM_00040 IPR004839 Aminotransferase, class I/classII VM_00040 IPR015424 Pyridoxal phosphate-dependent transferase VM_00040 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VM_00045 IPR006194 Glycine-tRNA synthetase, heterodimeric VM_00045 IPR008909 DALR anticodon binding VM_00045 IPR015944 Glycine-tRNA ligase, beta subunit VM_00050 IPR002310 Glycine-tRNA ligase, alpha subunit VM_00050 IPR006194 Glycine-tRNA synthetase, heterodimeric VM_00055 IPR001727 Gdt1 family VM_00065 IPR001455 TusA-like domain VM_00065 IPR036868 TusA-like domain superfamily VM_00065 IPR022931 Sulfur carrier protein TusA VM_00075 IPR037402 HTH-type transcriptional regulator YidZ, PBP2 domain VM_00075 IPR036390 Winged helix DNA-binding domain superfamily VM_00075 IPR036388 Winged helix-like DNA-binding domain superfamily VM_00075 IPR023746 Transcription regulator HTH, YidZ VM_00075 IPR000847 Transcription regulator HTH, LysR VM_00075 IPR005119 LysR, substrate-binding VM_00080 IPR013149 Alcohol dehydrogenase, C-terminal VM_00080 IPR013154 Alcohol dehydrogenase, N-terminal VM_00080 IPR011032 GroES-like superfamily VM_00080 IPR036291 NAD(P)-binding domain superfamily VM_00080 IPR020843 Polyketide synthase, enoylreductase domain VM_00080 IPR014188 Acrylyl-CoA reductase AcuI VM_00085 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VM_00085 IPR038110 Threonine dehydratase, ACT-like domain superfamily VM_00085 IPR001721 Threonine dehydratase, ACT-like domain VM_00085 IPR005787 Threonine dehydratase, biosynthetic VM_00085 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site VM_00085 IPR001926 Pyridoxal-phosphate dependent enzyme VM_00090 IPR004404 Dihydroxy-acid dehydratase VM_00090 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase VM_00090 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site VM_00090 IPR037237 IlvD/EDD, N-terminal domain VM_00090 IPR042096 Dihydroxy-acid dehydratase, C-terminal VM_00095 IPR005785 Branched-chain amino acid aminotransferase I VM_00095 IPR018300 Aminotransferase, class IV, conserved site VM_00095 IPR001544 Aminotransferase class IV VM_00095 IPR033939 Branched-chain aminotransferase VM_00095 IPR036038 Aminotransferase-like, PLP-dependent enzymes VM_00105 IPR000399 TPP-binding enzyme, conserved site VM_00105 IPR012846 Acetolactate synthase, large subunit, biosynthetic VM_00105 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding VM_00105 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain VM_00105 IPR012000 Thiamine pyrophosphate enzyme, central domain VM_00105 IPR029061 Thiamin diphosphate-binding fold VM_00105 IPR039368 Acetolactate synthase large subunit, TPP binding domain VM_00105 IPR029035 DHS-like NAD/FAD-binding domain superfamily VM_00110 IPR001208 MCM domain VM_00110 IPR000523 Magnesium chelatase ChlI domain VM_00110 IPR025158 Mg chelatase-related protein, C-terminal domain VM_00110 IPR020568 Ribosomal protein S5 domain 2-type fold VM_00110 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_00110 IPR003593 AAA+ ATPase domain VM_00110 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VM_00110 IPR004482 Mg chelatase-related protein VM_00115 IPR002123 Phospholipid/glycerol acyltransferase VM_00120 IPR001853 DSBA-like thioredoxin domain VM_00120 IPR013766 Thioredoxin domain VM_00120 IPR036249 Thioredoxin-like superfamily VM_00120 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL VM_00125 IPR032882 SrkA/RdoA protein kinase VM_00125 IPR011009 Protein kinase-like domain superfamily VM_00125 IPR002575 Aminoglycoside phosphotransferase VM_00130 IPR032879 FixG, C-terminal immunoglobulin-like domain VM_00130 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VM_00130 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG VM_00130 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VM_00130 IPR013783 Immunoglobulin-like fold VM_00135 IPR038134 YihD-like superfamily VM_00135 IPR009383 Protein of unknown function DUF1040 VM_00145 IPR014752 Arrestin, C-terminal VM_00145 IPR009776 Sporulation stage 0, protein M VM_00145 IPR014756 Immunoglobulin E-set VM_00150 IPR004254 AdipoR/Haemolysin-III-related VM_00150 IPR005744 Hly-III VM_00160 IPR003445 Cation transporter VM_00160 IPR004772 TrkH potassium transport family VM_00165 IPR006036 Potassium uptake protein TrkA VM_00165 IPR036291 NAD(P)-binding domain superfamily VM_00165 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily VM_00165 IPR003148 Regulator of K+ conductance, N-terminal VM_00165 IPR006037 Regulator of K+ conductance, C-terminal VM_00170 IPR023267 RNA (C5-cytosine) methyltransferase VM_00170 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VM_00170 IPR006027 NusB/RsmB/TIM44 VM_00170 IPR004573 rRNA small subunit methyltransferase B VM_00170 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type VM_00170 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site VM_00170 IPR035926 NusB-like superfamily VM_00175 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain VM_00175 IPR001555 Phosphoribosylglycinamide formyltransferase, active site VM_00175 IPR011034 Formyl transferase-like, C-terminal domain superfamily VM_00175 IPR036477 Formyl transferase, N-terminal domain superfamily VM_00175 IPR005793 Formyl transferase, C-terminal VM_00175 IPR037022 Formyl transferase, C-terminal domain superfamily VM_00175 IPR002376 Formyl transferase, N-terminal VM_00175 IPR005794 Methionyl-tRNA formyltransferase VM_00180 IPR023635 Peptide deformylase VM_00180 IPR036821 Peptide deformylase superfamily VM_00185 IPR018392 LysM domain VM_00185 IPR036779 LysM domain superfamily VM_00190 IPR041614 DprA, winged helix domain VM_00190 IPR036388 Winged helix-like DNA-binding domain superfamily VM_00190 IPR003488 DNA recombination-mediator protein A VM_00195 IPR007456 Smg VM_00200 IPR013498 DNA topoisomerase, type IA, zn finger VM_00200 IPR000380 DNA topoisomerase, type IA VM_00205 IPR011761 ATP-grasp fold VM_00205 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain VM_00205 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit VM_00205 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type VM_00205 IPR013815 ATP-grasp fold, subdomain 1 VM_00205 IPR016185 Pre-ATP-grasp domain superfamily VM_00205 IPR011054 Rudiment single hybrid motif VM_00210 IPR035893 PurE domain superfamily VM_00210 IPR024694 PurE, prokaryotic type VM_00210 IPR033747 Class I PurE VM_00210 IPR000031 PurE domain VM_00215 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily VM_00215 IPR023535 Threonylcarbamoyl-AMP synthase VM_00215 IPR006070 YrdC-like domain VM_00220 IPR001260 Coproporphyrinogen III oxidase, aerobic VM_00220 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily VM_00220 IPR018375 Coproporphyrinogen III oxidase, conserved site VM_00225 IPR041121 SDH, C-terminal VM_00225 IPR011342 Shikimate dehydrogenase VM_00225 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal VM_00225 IPR022893 Shikimate dehydrogenase family VM_00225 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase VM_00225 IPR036291 NAD(P)-binding domain superfamily VM_00235 IPR011004 Trimeric LpxA-like superfamily VM_00235 IPR001451 Hexapeptide repeat VM_00280 IPR003691 Putative fluoride ion transporter CrcB VM_00285 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B VM_00285 IPR038521 ThiC/Bza superfamily VM_00285 IPR025747 ThiC-associated domain VM_00285 IPR037509 Phosphomethylpyrimidine synthase VM_00290 IPR034291 Thiamine phosphate synthase VM_00290 IPR036206 Thiamin phosphate synthase superfamily VM_00290 IPR013785 Aldolase-type TIM barrel VM_00290 IPR022998 Thiamine phosphate synthase/TenI VM_00295 IPR035985 Ubiquitin-activating enzyme VM_00295 IPR000594 THIF-type NAD/FAD binding fold VM_00295 IPR012731 Thiazole biosynthesis adenylyltransferase ThiF VM_00300 IPR003749 Sulfur carrier ThiS/MoaD-like VM_00300 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VM_00300 IPR012675 Beta-grasp domain superfamily VM_00300 IPR010035 ThiS, thiamine-biosynthesis VM_00305 IPR008867 Thiazole synthase VM_00305 IPR033983 Thiazole synthase ThiG VM_00305 IPR013785 Aldolase-type TIM barrel VM_00310 IPR013785 Aldolase-type TIM barrel VM_00310 IPR010722 Biotin and thiamin synthesis-associated domain VM_00310 IPR007197 Radical SAM VM_00310 IPR012726 Thiazole biosynthesis ThiH VM_00310 IPR034428 ThiH/NocL/HydG-like VM_00315 IPR000994 Peptidase M24 VM_00315 IPR001714 Peptidase M24, methionine aminopeptidase VM_00315 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site VM_00315 IPR000587 Creatinase, N-terminal VM_00315 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VM_00315 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site VM_00315 IPR001714 Peptidase M24, methionine aminopeptidase VM_00315 IPR000994 Peptidase M24 VM_00315 IPR000587 Creatinase, N-terminal VM_00315 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VM_00315 IPR036005 Creatinase/aminopeptidase-like VM_00315 IPR036005 Creatinase/aminopeptidase-like VM_00320 IPR037402 HTH-type transcriptional regulator YidZ, PBP2 domain VM_00320 IPR036390 Winged helix DNA-binding domain superfamily VM_00320 IPR036388 Winged helix-like DNA-binding domain superfamily VM_00320 IPR005119 LysR, substrate-binding VM_00320 IPR000847 Transcription regulator HTH, LysR VM_00320 IPR023746 Transcription regulator HTH, YidZ VM_00325 IPR023697 Multidrug resistance protein MdtL VM_00325 IPR011701 Major facilitator superfamily VM_00325 IPR020846 Major facilitator superfamily domain VM_00325 IPR036259 MFS transporter superfamily VM_00335 IPR011008 Dimeric alpha-beta barrel VM_00335 IPR019888 Transcription regulator AsnC-type VM_00335 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VM_00335 IPR036390 Winged helix DNA-binding domain superfamily VM_00335 IPR000485 AsnC-type HTH domain VM_00335 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VM_00335 IPR036388 Winged helix-like DNA-binding domain superfamily VM_00335 IPR011991 ArsR-like helix-turn-helix domain VM_00340 IPR001633 EAL domain VM_00340 IPR035919 EAL domain superfamily VM_00340 IPR000160 GGDEF domain VM_00340 IPR029787 Nucleotide cyclase VM_00340 IPR000014 PAS domain VM_00340 IPR013656 PAS fold-4 VM_00340 IPR035965 PAS domain superfamily VM_00345 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VM_00345 IPR007536 Ribosomal RNA small subunit methyltransferase J VM_00355 IPR004779 Carboxylate/Amino Acid/Amine Transporter VM_00355 IPR000620 EamA domain VM_00360 IPR006016 UspA VM_00360 IPR006015 Universal stress protein A family VM_00360 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_00370 IPR008331 Ferritin/DPS protein domain VM_00370 IPR001519 Ferritin VM_00370 IPR012347 Ferritin-like VM_00370 IPR009040 Ferritin-like diiron domain VM_00370 IPR009078 Ferritin-like superfamily VM_00370 IPR041719 Ferritin, prokaryotic-type VM_00375 IPR019598 Universal stress protein B VM_00380 IPR036188 FAD/NAD(P)-binding domain superfamily VM_00380 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like VM_00380 IPR023166 HI0933-like insert domain superfamily VM_00385 IPR013655 PAS fold-3 VM_00385 IPR035965 PAS domain superfamily VM_00385 IPR000014 PAS domain VM_00385 IPR001610 PAC motif VM_00385 IPR003660 HAMP domain VM_00385 IPR004090 Chemotaxis methyl-accepting receptor VM_00385 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_00395 IPR003798 DNA recombination RmuC VM_00400 IPR023576 UbiE/COQ5 methyltransferase, conserved site VM_00400 IPR004033 UbiE/COQ5 methyltransferase VM_00400 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VM_00405 IPR036527 SCP2 sterol-binding domain superfamily VM_00405 IPR003033 SCP2 sterol-binding domain VM_00405 IPR038989 Ubiquinone biosynthesis protein UbiJ VM_00410 IPR011009 Protein kinase-like domain superfamily VM_00410 IPR010232 Probable protein kinase UbiB VM_00410 IPR004147 UbiB domain VM_00415 IPR006312 Sec-independent protein translocase protein TatA/E VM_00415 IPR003369 Sec-independent protein translocase protein TatA/B/E VM_00420 IPR018448 Twin-arginine translocation protein TatB VM_00420 IPR003369 Sec-independent protein translocase protein TatA/B/E VM_00425 IPR019820 Sec-independent periplasmic protein translocase, conserved site VM_00425 IPR002033 Sec-independent periplasmic protein translocase TatC VM_00430 IPR002528 Multi antimicrobial extrusion protein VM_00440 IPR039418 LexA-like VM_00440 IPR006199 LexA repressor, DNA-binding domain VM_00440 IPR006197 Peptidase S24, LexA-like VM_00440 IPR036388 Winged helix-like DNA-binding domain superfamily VM_00440 IPR036390 Winged helix DNA-binding domain superfamily VM_00440 IPR006200 Transcription regulator LexA VM_00440 IPR036286 LexA/Signal peptidase-like superfamily VM_00440 IPR015927 Peptidase S24/S26A/S26B/S26C VM_00445 IPR002123 Phospholipid/glycerol acyltransferase VM_00445 IPR041728 GPAT/DHAPAT, acyltransferase domain VM_00445 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB VM_00445 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase VM_00450 IPR006370 4-hydroxybenzoate polyprenyltransferase-like VM_00450 IPR039653 Prenyltransferase VM_00450 IPR000537 UbiA prenyltransferase family VM_00455 IPR007440 Chorismate--pyruvate lyase VM_00455 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VM_00465 IPR005503 Flagellar basal body-associated protein FliL VM_00470 IPR022732 Peptidase S54, GlpG peptidase, N-terminal VM_00470 IPR022764 Peptidase S54, rhomboid domain VM_00470 IPR035952 Rhomboid-like superfamily VM_00470 IPR038236 GlpG peptidase, N-terminal domain superfamily VM_00470 IPR023662 Rhomboid protease GlpG VM_00475 IPR023695 Thiosulfate sulfurtransferase, bacterial VM_00475 IPR001763 Rhodanese-like domain VM_00475 IPR036873 Rhodanese-like domain superfamily VM_00485 IPR018228 Deoxyribonuclease, TatD-related, conserved site VM_00485 IPR001130 TatD family VM_00485 IPR032466 Metal-dependent hydrolase VM_00485 IPR015991 Uncharacterised hydrolase TatD-type VM_00490 IPR030656 Delta-aminolevulinic acid dehydratase, active site VM_00490 IPR013785 Aldolase-type TIM barrel VM_00490 IPR001731 Delta-aminolevulinic acid dehydratase VM_00500 IPR029060 PIN-like domain superfamily VM_00500 IPR008918 Helix-hairpin-helix motif, class 2 VM_00500 IPR001098 DNA-directed DNA polymerase, family A, palm domain VM_00500 IPR002298 DNA polymerase A VM_00500 IPR012337 Ribonuclease H-like superfamily VM_00500 IPR020045 DNA polymerase I-like, H3TH domain VM_00500 IPR018320 DNA polymerase 1 VM_00500 IPR019760 DNA-directed DNA polymerase, family A, conserved site VM_00500 IPR036279 5'-3' exonuclease, C-terminal domain superfamily VM_00500 IPR036397 Ribonuclease H superfamily VM_00500 IPR002421 5'-3' exonuclease, N-terminal VM_00500 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal VM_00500 IPR002562 3'-5' exonuclease domain VM_00505 IPR012337 Ribonuclease H-like superfamily VM_00505 IPR014737 Transposase, Tn5-like, C-terminal VM_00505 IPR014736 Transposase, Tn5-like, core VM_00505 IPR003201 Transposase Tn5, dimerisation VM_00505 IPR002559 Transposase, IS4-like VM_00505 IPR038215 Transposase, Tn5-like, N-terminal domain superfamily VM_00505 IPR014735 Transposase, Tn5-like, N-terminal VM_00510 IPR006073 GTP binding domain VM_00510 IPR030393 EngB-type guanine nucleotide-binding (G) domain VM_00510 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC VM_00510 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_00515 IPR036909 Cytochrome c-like domain superfamily VM_00515 IPR024167 Cytochrome c4-like VM_00515 IPR009056 Cytochrome c-like domain VM_00525 IPR007336 Der GTPase activator VM_00530 IPR019617 Domain of unknown function DUF2489 VM_00535 IPR034505 Anaerobic coproporphyrinogen-III oxidase VM_00535 IPR006638 Elp3/MiaB/NifB VM_00535 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN VM_00535 IPR010723 HemN, C-terminal VM_00535 IPR023404 Radical SAM, alpha/beta horseshoe VM_00535 IPR007197 Radical SAM VM_00540 IPR005254 Heme biosynthesis-associated TPR protein VM_00540 IPR010817 HemY, N-terminal VM_00540 IPR011990 Tetratricopeptide-like helical domain superfamily VM_00545 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX VM_00550 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase VM_00550 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily VM_00550 IPR039793 Uroporphyrinogen-III synthase VM_00555 IPR000860 Porphobilinogen deaminase VM_00555 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site VM_00555 IPR022418 Porphobilinogen deaminase, C-terminal VM_00555 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily VM_00555 IPR022417 Porphobilinogen deaminase, N-terminal VM_00565 IPR000274 Adenylate cyclase, class-I VM_00565 IPR024686 Adenylate cyclase class-I, conserved site VM_00565 IPR024685 Adenylate cyclase class-I, N-terminal domain VM_00570 IPR036524 Frataxin/CyaY superfamily VM_00570 IPR020895 Frataxin conserved site VM_00570 IPR002908 Frataxin/CyaY VM_00580 IPR029066 PLP-binding barrel VM_00580 IPR000183 Ornithine/DAP/Arg decarboxylase VM_00580 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site VM_00580 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal VM_00580 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site VM_00580 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal VM_00580 IPR002986 Diaminopimelate decarboxylase, LysA VM_00580 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal VM_00585 IPR018510 Diaminopimelate epimerase, active site VM_00585 IPR001653 Diaminopimelate epimerase, DapF VM_00590 IPR007435 Protein of unknown function DUF484 VM_00590 IPR029016 GAF-like domain superfamily VM_00595 IPR023009 Tyrosine recombinase XerC/XerD VM_00595 IPR011931 Tyrosine recombinase XerC VM_00595 IPR004107 Integrase, SAM-like, N-terminal VM_00595 IPR010998 Integrase/recombinase, N-terminal VM_00595 IPR002104 Integrase, catalytic domain VM_00595 IPR011010 DNA breaking-rejoining enzyme, catalytic core VM_00595 IPR013762 Integrase-like, catalytic domain superfamily VM_00600 IPR041492 Haloacid dehalogenase-like hydrolase VM_00600 IPR006439 HAD hydrolase, subfamily IA VM_00600 IPR036412 HAD-like superfamily VM_00600 IPR023214 HAD superfamily VM_00605 IPR029787 Nucleotide cyclase VM_00605 IPR000160 GGDEF domain VM_00605 IPR013702 FIST domain, N-terminal VM_00605 IPR019494 FIST, C-domain VM_00605 IPR035919 EAL domain superfamily VM_00605 IPR001633 EAL domain VM_00620 IPR023214 HAD superfamily VM_00620 IPR006379 HAD-superfamily hydrolase, subfamily IIB VM_00620 IPR036412 HAD-like superfamily VM_00620 IPR000150 Cof family VM_00625 IPR022742 Serine aminopeptidase, S33 VM_00625 IPR029058 Alpha/Beta hydrolase fold VM_00630 IPR001123 Amino acid exporter protein, LeuE-type VM_00635 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing VM_00635 IPR035919 EAL domain superfamily VM_00635 IPR013976 Metal-dependent hydrolase HDOD VM_00635 IPR001633 EAL domain VM_00640 IPR002177 DNA-binding protein Dps VM_00640 IPR023188 DNA-binding protein Dps, conserved site VM_00640 IPR012347 Ferritin-like VM_00640 IPR009078 Ferritin-like superfamily VM_00640 IPR008331 Ferritin/DPS protein domain VM_00675 IPR004398 RNA methyltransferase, RsmD VM_00675 IPR002052 DNA methylase, N-6 adenine-specific, conserved site VM_00675 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VM_00680 IPR036225 SRP/SRP receptor, N-terminal VM_00680 IPR003593 AAA+ ATPase domain VM_00680 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily VM_00680 IPR004390 Signal-recognition particle receptor FtsY VM_00680 IPR013822 Signal recognition particle SRP54, helical bundle VM_00680 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain VM_00680 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_00685 IPR017871 ABC transporter, conserved site VM_00685 IPR003439 ABC transporter-like VM_00685 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_00685 IPR005286 Cell division protein FtsE, ATP-binding VM_00685 IPR003593 AAA+ ATPase domain VM_00690 IPR040690 FtsX, extracellular domain VM_00690 IPR004513 Cell division protein FtsX VM_00695 IPR013324 RNA polymerase sigma factor, region 3/4-like VM_00695 IPR014284 RNA polymerase sigma-70 like domain VM_00695 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria VM_00695 IPR009042 RNA polymerase sigma-70 region 1.2 VM_00695 IPR036388 Winged helix-like DNA-binding domain superfamily VM_00695 IPR007627 RNA polymerase sigma-70 region 2 VM_00695 IPR007630 RNA polymerase sigma-70 region 4 VM_00695 IPR013325 RNA polymerase sigma factor, region 2 VM_00695 IPR000943 RNA polymerase sigma-70 VM_00705 IPR023753 FAD/NAD(P)-binding domain VM_00705 IPR022962 Soluble pyridine nucleotide transhydrogenase VM_00705 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily VM_00705 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I VM_00705 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VM_00705 IPR036188 FAD/NAD(P)-binding domain superfamily VM_00710 IPR001647 DNA-binding HTH domain, TetR-type VM_00710 IPR023764 Transcriptional repressor HTH, FabR VM_00710 IPR009057 Homeobox-like domain superfamily VM_00715 IPR009867 Protein of unknown function DUF1422 VM_00720 IPR030390 RNA methyltransferase TrmA, active site VM_00720 IPR030391 RNA methyltransferase TrmA, conserved site VM_00720 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VM_00720 IPR010280 (Uracil-5)-methyltransferase family VM_00720 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA VM_00725 IPR010917 TonB-dependent receptor, conserved site VM_00725 IPR039426 Vitamin B12 transporter BtuB-like VM_00725 IPR012910 TonB-dependent receptor, plug domain VM_00725 IPR037066 TonB-dependent receptor, plug domain superfamily VM_00725 IPR000531 TonB-dependent receptor-like, beta-barrel VM_00725 IPR010101 TonB-dependent vitamin B12 transporter BtuB VM_00725 IPR010916 TonB box, conserved site VM_00725 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VM_00735 IPR015942 Asp/Glu/hydantoin racemase VM_00735 IPR001920 Asp/Glu racemase VM_00735 IPR004391 Glutamate racemase VM_00735 IPR018187 Asp/Glu racemase, active site 1 VM_00800 IPR006330 Adenosine/adenine deaminase VM_00800 IPR032466 Metal-dependent hydrolase VM_00800 IPR001365 Adenosine/AMP deaminase domain VM_00800 IPR028893 Adenosine deaminase VM_00805 IPR001633 EAL domain VM_00805 IPR000160 GGDEF domain VM_00805 IPR005330 MHYT domain VM_00805 IPR000014 PAS domain VM_00805 IPR035965 PAS domain superfamily VM_00805 IPR035919 EAL domain superfamily VM_00805 IPR029787 Nucleotide cyclase VM_00810 IPR011006 CheY-like superfamily VM_00810 IPR009057 Homeobox-like domain superfamily VM_00810 IPR003593 AAA+ ATPase domain VM_00810 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_00810 IPR001789 Signal transduction response regulator, receiver domain VM_00810 IPR002078 RNA polymerase sigma factor 54 interaction domain VM_00810 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VM_00810 IPR010114 DNA-binding transcriptional regulator NtrC VM_00810 IPR025944 Sigma-54 interaction domain, conserved site VM_00810 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VM_00810 IPR002197 DNA binding HTH domain, Fis-type VM_00815 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VM_00815 IPR003594 Histidine kinase/HSP90-like ATPase VM_00815 IPR013767 PAS fold VM_00815 IPR035965 PAS domain superfamily VM_00815 IPR000014 PAS domain VM_00815 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VM_00815 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VM_00815 IPR005467 Histidine kinase domain VM_00815 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_00825 IPR008147 Glutamine synthetase, beta-Grasp domain VM_00825 IPR027303 Glutamine synthetase, glycine-rich site VM_00825 IPR036651 Glutamine synthetase, N-terminal domain superfamily VM_00825 IPR027302 Glutamine synthetase, N-terminal conserved site VM_00825 IPR001637 Glutamine synthetase class-I, adenylation site VM_00825 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain VM_00825 IPR008146 Glutamine synthetase, catalytic domain VM_00825 IPR004809 Glutamine synthetase type I VM_00845 IPR017039 Virulence factor BrkB VM_00845 IPR023679 Uncharacterised protein family UPF0761, bacterial VM_00850 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily VM_00850 IPR003732 D-aminoacyl-tRNA deacylase DTD VM_00855 IPR012660 Thioesterase, putative VM_00855 IPR029069 HotDog domain superfamily VM_00855 IPR000182 GNAT domain VM_00855 IPR016181 Acyl-CoA N-acyltransferase VM_00865 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal VM_00865 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising VM_00865 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site VM_00865 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal VM_00870 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily VM_00870 IPR016153 Heat shock protein Hsp33, N-terminal VM_00870 IPR016154 Heat shock protein Hsp33, C-terminal VM_00870 IPR000397 Heat shock protein Hsp33 VM_00875 IPR025708 Heat shock protein 15 VM_00875 IPR002942 RNA-binding S4 domain VM_00875 IPR036986 RNA-binding S4 domain superfamily VM_00880 IPR001639 Type II secretion system protein C VM_00880 IPR036034 PDZ superfamily VM_00880 IPR024961 Type II secretion system protein C, N-terminal VM_00885 IPR038591 NolW-like superfamily VM_00885 IPR005644 NolW-like VM_00885 IPR001775 GspD/PilQ family VM_00885 IPR013356 Type II secretion system GspD VM_00885 IPR004845 Type II secretion system GspD, conserved site VM_00885 IPR004846 Type II/III secretion system VM_00890 IPR003593 AAA+ ATPase domain VM_00890 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_00890 IPR001482 Type II/IV secretion system protein VM_00890 IPR037257 General secretory system II, protein E, N-terminal superfamily VM_00890 IPR013369 Type II secretion system GspE VM_00890 IPR042181 Type II secretion system, protein E, N-terminal VM_00895 IPR003004 GspF/PilC family VM_00895 IPR018076 Type II secretion system F domain VM_00895 IPR042094 Type II secretion system F domain superfamily VM_00895 IPR011850 General secretion pathway protein F VM_00895 IPR001992 Type II secretion system conserved site VM_00900 IPR000983 Bacterial general secretion pathway protein G-type pilin VM_00900 IPR012902 Prokaryotic N-terminal methylation site VM_00900 IPR013545 Type II secretion system protein G VM_00900 IPR010054 General secretion pathway protein G VM_00905 IPR002416 Type II secretion system protein H VM_00905 IPR012902 Prokaryotic N-terminal methylation site VM_00905 IPR022346 General secretion pathway, GspH VM_00910 IPR010052 Type II secretion system protein I VM_00910 IPR012902 Prokaryotic N-terminal methylation site VM_00910 IPR003413 Type II secretion system protein I domain VM_00915 IPR012902 Prokaryotic N-terminal methylation site VM_00915 IPR010055 Type II secretion system protein J VM_00920 IPR038072 GspK, central domain superfamily VM_00920 IPR005628 General secretion pathway protein K VM_00925 IPR024230 GspL, cytoplasmic actin-ATPase-like domain VM_00925 IPR025691 GspL periplasmic domain VM_00925 IPR007812 Type II secretion system protein L VM_00930 IPR007690 Type II secretion system, protein M VM_00930 IPR023229 Type II secretion system protein M, periplasmic domain superfamily VM_00935 IPR022792 Type II secretion system, protein N VM_00935 IPR000645 Type II secretion system protein N, conserved site VM_00940 IPR020583 Inositol monophosphatase, metal-binding site VM_00940 IPR020550 Inositol monophosphatase, conserved site VM_00940 IPR000760 Inositol monophosphatase-like VM_00940 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ VM_00945 IPR020084 NUDIX hydrolase, conserved site VM_00945 IPR000086 NUDIX hydrolase domain VM_00945 IPR015797 NUDIX hydrolase-like domain superfamily VM_00950 IPR034904 Fe-S cluster assembly domain superfamily VM_00950 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal VM_00950 IPR035903 HesB-like domain superfamily VM_00950 IPR000361 FeS cluster biogenesis VM_00950 IPR017726 Fe/S biogenesis protein NfuA VM_00955 IPR000836 Phosphoribosyltransferase domain VM_00955 IPR029057 Phosphoribosyltransferase-like VM_00955 IPR005222 Competence protein ComF VM_00960 IPR029058 Alpha/Beta hydrolase fold VM_00960 IPR000073 Alpha/beta hydrolase fold-1 VM_00960 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase VM_00970 IPR023323 Tex-like domain superfamily VM_00970 IPR041692 HHH domain 9 VM_00970 IPR012340 Nucleic acid-binding, OB-fold VM_00970 IPR006641 YqgF/RNase H-like domain VM_00970 IPR010994 RuvA domain 2-like VM_00970 IPR022967 RNA-binding domain, S1 VM_00970 IPR003029 S1 domain VM_00970 IPR023319 Tex-like protein, HTH domain superfamily VM_00970 IPR018974 Tex-like protein, N-terminal VM_00970 IPR032639 Tex protein, YqgF-like domain VM_00970 IPR037027 YqgF/RNase H-like domain superfamily VM_00970 IPR012337 Ribonuclease H-like superfamily VM_00995 IPR006197 Peptidase S24, LexA-like VM_00995 IPR039418 LexA-like VM_00995 IPR015927 Peptidase S24/S26A/S26B/S26C VM_00995 IPR036286 LexA/Signal peptidase-like superfamily VM_01000 IPR024728 DNA polymerase type-Y, HhH motif VM_01000 IPR025188 Domain of unknown function DUF4113 VM_01000 IPR017961 DNA polymerase, Y-family, little finger domain VM_01000 IPR036775 DNA polymerase, Y-family, little finger domain superfamily VM_01000 IPR001126 UmuC domain VM_01070 IPR006935 Helicase/UvrB, N-terminal VM_01070 IPR014001 Helicase superfamily 1/2, ATP-binding domain VM_01070 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_01080 IPR006358 Transcription elongation factor GreB VM_01080 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily VM_01080 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal VM_01080 IPR023459 Transcription elongation factor GreA/GreB family VM_01080 IPR028624 Transcription elongation factor GreA/GreB VM_01080 IPR018151 Transcription elongation factor, GreA/GreB, conserved site VM_01080 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily VM_01080 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal VM_01115 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_01115 IPR015861 ABC transporter, ribose import, RbsA VM_01115 IPR017871 ABC transporter, conserved site VM_01115 IPR003439 ABC transporter-like VM_01115 IPR003593 AAA+ ATPase domain VM_01120 IPR001851 ABC transporter, permease VM_01125 IPR019800 Glycoside hydrolase, family 3, active site VM_01125 IPR002772 Glycoside hydrolase family 3 C-terminal domain VM_01125 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily VM_01125 IPR017853 Glycoside hydrolase superfamily VM_01125 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily VM_01125 IPR001764 Glycoside hydrolase, family 3, N-terminal VM_01130 IPR001223 Glycoside hydrolase family 18, catalytic domain VM_01130 IPR002126 Cadherin-like VM_01130 IPR022409 PKD/Chitinase domain VM_01130 IPR014756 Immunoglobulin E-set VM_01130 IPR001579 Glycoside hydrolase, chitinase active site VM_01130 IPR013783 Immunoglobulin-like fold VM_01130 IPR003610 Carbohydrate-binding module family 5/12 VM_01130 IPR036573 Carbohydrate-binding module superfamily 5/12 VM_01130 IPR011583 Chitinase II VM_01130 IPR029070 Chitinase insertion domain superfamily VM_01130 IPR013540 Chitinase A N-terminal VM_01130 IPR017853 Glycoside hydrolase superfamily VM_01135 IPR011006 CheY-like superfamily VM_01135 IPR036388 Winged helix-like DNA-binding domain superfamily VM_01135 IPR039420 Transcriptional regulatory protein WalR-like VM_01135 IPR001789 Signal transduction response regulator, receiver domain VM_01135 IPR016032 Signal transduction response regulator, C-terminal effector VM_01135 IPR001867 OmpR/PhoB-type DNA-binding domain VM_01140 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VM_01140 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_01140 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VM_01140 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VM_01140 IPR005467 Histidine kinase domain VM_01140 IPR003594 Histidine kinase/HSP90-like ATPase VM_01140 IPR003660 HAMP domain VM_01145 IPR006043 Xanthine/uracil/vitamin C permease VM_01145 IPR006042 Xanthine/uracil permease VM_01150 IPR012340 Nucleic acid-binding, OB-fold VM_01150 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_01150 IPR033454 RecG, wedge domain VM_01150 IPR011545 DEAD/DEAH box helicase domain VM_01150 IPR004609 ATP-dependent DNA helicase RecG VM_01150 IPR014001 Helicase superfamily 1/2, ATP-binding domain VM_01150 IPR001650 Helicase, C-terminal VM_01155 IPR012676 TGS-like VM_01155 IPR007685 RelA/SpoT VM_01155 IPR033655 RelA, TGS domain VM_01155 IPR004811 RelA/SpoT family VM_01155 IPR003607 HD/PDEase domain VM_01155 IPR002912 ACT domain VM_01155 IPR012675 Beta-grasp domain superfamily VM_01155 IPR004095 TGS VM_01160 IPR036161 RPB6/omega subunit-like superfamily VM_01160 IPR006110 RNA polymerase, subunit omega/K/RPB6 VM_01160 IPR003716 DNA-directed RNA polymerase, omega subunit VM_01160 IPR012293 RNA polymerase subunit, RPB6/omega VM_01165 IPR008145 Guanylate kinase/L-type calcium channel beta subunit VM_01165 IPR008144 Guanylate kinase-like domain VM_01165 IPR017665 Guanylate kinase VM_01165 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_01165 IPR020590 Guanylate kinase, conserved site VM_01170 IPR003744 Queuosine precursor transporter VM_01175 IPR001734 Sodium/solute symporter VM_01175 IPR038377 Sodium/glucose symporter superfamily VM_01175 IPR019899 Sodium/solute symporter, VC2705 subfamily VM_01190 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VM_01190 IPR038722 Ner, winged helix-turn-helix DNA-binding domain VM_01195 IPR015378 Transposase-like, Mu, C-terminal VM_01195 IPR036397 Ribonuclease H superfamily VM_01195 IPR009057 Homeobox-like domain superfamily VM_01195 IPR012337 Ribonuclease H-like superfamily VM_01195 IPR009061 Putative DNA-binding domain superfamily VM_01195 IPR015126 Mu DNA binding, I gamma subdomain VM_01195 IPR003314 Mu-type HTH domain VM_01195 IPR009004 Transposase, Mu, C-terminal VM_01195 IPR036388 Winged helix-like DNA-binding domain superfamily VM_01195 IPR004189 Bacteriophage Mu, transposase VM_01200 IPR036733 B transposition protein, C-terminal domain superfamily VM_01200 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_01200 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VM_01200 IPR003593 AAA+ ATPase domain VM_01200 IPR001387 Cro/C1-type helix-turn-helix domain VM_01200 IPR009084 B transposition protein, C-terminal VM_01375 IPR018774 Bacteriophage Mu, GpT VM_01385 IPR009752 Bacteriophage Mu, Gp36 VM_01415 IPR019289 Bacteriophage tail protein Gp41, putative VM_01435 IPR014462 Phage-associated protein Gp45 VM_01435 IPR013046 Phage baseplate assembly protein V/Gp45 VM_01445 IPR006949 Baseplate protein J-like VM_01450 IPR018755 Bacteriophage Mu-like, Gp48 VM_01465 IPR005170 Transporter-associated domain VM_01465 IPR006153 Cation/H+ exchanger VM_01465 IPR038770 Sodium/solute symporter superfamily VM_01465 IPR036318 FAD-binding, type PCMH-like superfamily VM_01465 IPR023729 K(+)/H(+) antiporter NhaP2 VM_01465 IPR030151 K(+)/H(+) antiporter NhaP VM_01465 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily VM_01465 IPR006037 Regulator of K+ conductance, C-terminal VM_01470 IPR011006 CheY-like superfamily VM_01470 IPR000792 Transcription regulator LuxR, C-terminal VM_01470 IPR001789 Signal transduction response regulator, receiver domain VM_01470 IPR016032 Signal transduction response regulator, C-terminal effector VM_01475 IPR013766 Thioredoxin domain VM_01475 IPR035671 DsbD gamma VM_01475 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain VM_01475 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily VM_01475 IPR022910 Thiol:disulphide interchange protein DsbD VM_01475 IPR036249 Thioredoxin-like superfamily VM_01475 IPR003834 Cytochrome C biogenesis protein, transmembrane domain VM_01475 IPR017937 Thioredoxin, conserved site VM_01480 IPR004668 Anaerobic c4-dicarboxylate membrane transporter VM_01485 IPR008948 L-Aspartase-like VM_01485 IPR000362 Fumarate lyase family VM_01485 IPR004708 Aspartate ammonia-lyase VM_01485 IPR020557 Fumarate lyase, conserved site VM_01485 IPR024083 Fumarase/histidase, N-terminal VM_01485 IPR018951 Fumarase C, C-terminal VM_01485 IPR022761 Fumarate lyase, N-terminal VM_01490 IPR007313 FxsA cytoplasmic membrane protein VM_01495 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VM_01495 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase VM_01495 IPR029028 Alpha/beta knot methyltransferases VM_01495 IPR001537 tRNA/rRNA methyltransferase, SpoU type VM_01500 IPR019832 Manganese/iron superoxide dismutase, C-terminal VM_01500 IPR001189 Manganese/iron superoxide dismutase VM_01500 IPR019833 Manganese/iron superoxide dismutase, binding site VM_01500 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily VM_01500 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily VM_01500 IPR019831 Manganese/iron superoxide dismutase, N-terminal VM_01505 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VM_01505 IPR005467 Histidine kinase domain VM_01505 IPR032404 Two-component sensor protein CpxA, periplasmic domain VM_01505 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_01505 IPR003660 HAMP domain VM_01505 IPR003594 Histidine kinase/HSP90-like ATPase VM_01505 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VM_01505 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VM_01505 IPR038515 CpxA, periplasmic domain superfamily VM_01510 IPR039420 Transcriptional regulatory protein WalR-like VM_01510 IPR001789 Signal transduction response regulator, receiver domain VM_01510 IPR011006 CheY-like superfamily VM_01510 IPR036388 Winged helix-like DNA-binding domain superfamily VM_01510 IPR001867 OmpR/PhoB-type DNA-binding domain VM_01520 IPR023783 Cation efflux pump FieF VM_01520 IPR002524 Cation efflux protein VM_01520 IPR027470 Cation efflux protein, cytoplasmic domain VM_01520 IPR036837 Cation efflux protein, cytoplasmic domain superfamily VM_01520 IPR027469 Cation efflux transmembrane domain superfamily VM_01525 IPR022953 ATP-dependent 6-phosphofructokinase VM_01525 IPR035966 Phosphofructokinase superfamily VM_01525 IPR000023 Phosphofructokinase domain VM_01525 IPR015912 Phosphofructokinase, conserved site VM_01525 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic VM_01525 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type VM_01530 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase VM_01535 IPR009252 Cell division protein ZapB VM_01540 IPR029041 FAD-linked oxidoreductase-like VM_01540 IPR004620 5,10-methylenetetrahydrofolate reductase VM_01540 IPR003171 Methylenetetrahydrofolate reductase VM_01545 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding VM_01545 IPR019811 Homoserine dehydrogenase, conserved site VM_01545 IPR036291 NAD(P)-binding domain superfamily VM_01545 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I VM_01545 IPR018042 Aspartate kinase, conserved site VM_01545 IPR001341 Aspartate kinase VM_01545 IPR001048 Aspartate/glutamate/uridylate kinase VM_01545 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain VM_01545 IPR036393 Acetylglutamate kinase-like superfamily VM_01545 IPR001342 Homoserine dehydrogenase, catalytic VM_01550 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme VM_01550 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VM_01550 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VM_01550 IPR015424 Pyridoxal phosphate-dependent transferase VM_01550 IPR011821 O-succinylhomoserine (thiol)-lyase VM_01555 IPR023453 Methionine repressor MetJ domain superfamily VM_01555 IPR010985 Ribbon-helix-helix VM_01555 IPR002084 Methionine repressor MetJ VM_01560 IPR012301 Malic enzyme, N-terminal domain VM_01560 IPR001891 Malic oxidoreductase VM_01560 IPR012302 Malic enzyme, NAD-binding VM_01560 IPR015884 Malic enzyme, conserved site VM_01560 IPR037062 Malic enzyme, N-terminal domain superfamily VM_01560 IPR036291 NAD(P)-binding domain superfamily VM_01565 IPR027491 Ribosomal protein L31 type A VM_01565 IPR002150 Ribosomal protein L31 VM_01565 IPR034704 L28p-like VM_01565 IPR042105 Ribosomal protein L31 superfamily VM_01570 IPR041236 Primosomal protein N, C-terminal domain VM_01570 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily VM_01570 IPR041222 Primosomal protein N', 3' DNA-binding domain VM_01570 IPR005259 Primosomal protein N' VM_01570 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_01570 IPR001650 Helicase, C-terminal VM_01570 IPR011545 DEAD/DEAH box helicase domain VM_01570 IPR014001 Helicase superfamily 1/2, ATP-binding domain VM_01570 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain VM_01575 IPR000843 LacI-type HTH domain VM_01575 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VM_01575 IPR028082 Periplasmic binding protein-like I VM_01585 IPR029055 Nucleophile aminohydrolases, N-terminal VM_01585 IPR022281 ATP-dependent protease, HslV subunit VM_01585 IPR001353 Proteasome, subunit alpha/beta VM_01585 IPR023333 Proteasome B-type subunit VM_01590 IPR003593 AAA+ ATPase domain VM_01590 IPR004491 Heat shock protein HslU VM_01590 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_01590 IPR019489 Clp ATPase, C-terminal VM_01590 IPR003959 ATPase, AAA-type, core VM_01595 IPR026046 UbiA prenyltransferase domain containing protein 1 VM_01595 IPR000537 UbiA prenyltransferase family VM_01595 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase VM_01600 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria VM_01600 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily VM_01600 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VM_01600 IPR010203 Regulator of ribonuclease activity A VM_01610 IPR020861 Triosephosphate isomerase, active site VM_01610 IPR000652 Triosephosphate isomerase VM_01610 IPR035990 Triosephosphate isomerase superfamily VM_01610 IPR013785 Aldolase-type TIM barrel VM_01610 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic VM_01630 IPR014036 DeoR C-terminal sensor domain VM_01630 IPR018356 Transcription regulator, HTH DeoR-type, conserved site VM_01630 IPR001034 DeoR-type HTH domain VM_01630 IPR036390 Winged helix DNA-binding domain superfamily VM_01630 IPR036388 Winged helix-like DNA-binding domain superfamily VM_01630 IPR037171 NagB/RpiA transferase-like VM_01635 IPR020818 GroES chaperonin family VM_01635 IPR018369 Chaperonin GroES, conserved site VM_01635 IPR011032 GroES-like superfamily VM_01635 IPR037124 GroES chaperonin superfamily VM_01640 IPR001844 Chaperonin Cpn60 VM_01640 IPR027410 TCP-1-like chaperonin intermediate domain superfamily VM_01640 IPR018370 Chaperonin Cpn60, conserved site VM_01640 IPR002423 Chaperonin Cpn60/TCP-1 family VM_01640 IPR027413 GroEL-like equatorial domain superfamily VM_01640 IPR027409 GroEL-like apical domain superfamily VM_01650 IPR022462 Lysine-2,3-aminomutase-like VM_01650 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase VM_01650 IPR007197 Radical SAM VM_01650 IPR013785 Aldolase-type TIM barrel VM_01655 IPR011768 Translation elongation factor P VM_01655 IPR013852 Translation elongation factor P/YeiP, conserved site VM_01655 IPR001059 Translation elongation factor P/YeiP, central VM_01655 IPR008991 Translation protein SH3-like domain superfamily VM_01655 IPR013185 Translation elongation factor, KOW-like VM_01655 IPR020599 Translation elongation factor P/YeiP VM_01655 IPR014722 Ribosomal protein L2, domain 2 VM_01655 IPR012340 Nucleic acid-binding, OB-fold VM_01655 IPR015365 Elongation factor P, C-terminal VM_01660 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit VM_01660 IPR003418 Fumarate reductase, subunit D VM_01665 IPR003510 Fumarate reductase, subunit C VM_01665 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit VM_01670 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VM_01670 IPR012675 Beta-grasp domain superfamily VM_01670 IPR009051 Alpha-helical ferredoxin VM_01670 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein VM_01670 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal VM_01670 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site VM_01670 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain VM_01670 IPR036010 2Fe-2S ferredoxin-like superfamily VM_01670 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VM_01675 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily VM_01675 IPR005884 Fumarate reductase, flavoprotein subunit VM_01675 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit VM_01675 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal VM_01675 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily VM_01675 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site VM_01675 IPR036188 FAD/NAD(P)-binding domain superfamily VM_01675 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain VM_01680 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) VM_01680 IPR006195 Aminoacyl-tRNA synthetase, class II VM_01680 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal VM_01680 IPR004525 Elongation factor P--(R)-beta-lysine ligase VM_01685 IPR036873 Rhodanese-like domain superfamily VM_01685 IPR001763 Rhodanese-like domain VM_01690 IPR003708 Bacterial protein export chaperone SecB VM_01690 IPR035958 SecB-like superfamily VM_01695 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily VM_01695 IPR013328 6-phosphogluconate dehydrogenase, domain 2 VM_01695 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent VM_01695 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal VM_01695 IPR036291 NAD(P)-binding domain superfamily VM_01695 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal VM_01700 IPR001451 Hexapeptide repeat VM_01700 IPR010493 Serine acetyltransferase, N-terminal VM_01700 IPR042122 Serine acetyltransferase, N-terminal domain superfamily VM_01700 IPR005881 Serine O-acetyltransferase VM_01700 IPR011004 Trimeric LpxA-like superfamily VM_01700 IPR018357 Hexapeptide transferase, conserved site VM_01710 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily VM_01710 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site VM_01710 IPR021135 Phosphoenolpyruvate carboxylase VM_01710 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type VM_01710 IPR033129 Phosphoenolpyruvate carboxylase, His active site VM_01715 IPR011650 Peptidase M20, dimerisation domain VM_01715 IPR002933 Peptidase M20 VM_01715 IPR010169 Acetylornithine deacetylase ArgE VM_01715 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site VM_01715 IPR036264 Bacterial exopeptidase dimerisation domain VM_01720 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site VM_01720 IPR036291 NAD(P)-binding domain superfamily VM_01720 IPR000534 Semialdehyde dehydrogenase, NAD-binding VM_01720 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 VM_01720 IPR012280 Semialdehyde dehydrogenase, dimerisation domain VM_01725 IPR001048 Aspartate/glutamate/uridylate kinase VM_01725 IPR004662 Acetylglutamate kinase family VM_01725 IPR036393 Acetylglutamate kinase-like superfamily VM_01725 IPR041731 N-Acetyl-L-glutamate kinase, noncyclic VM_01725 IPR037528 Acetylglutamate kinase ArgB VM_01730 IPR001518 Argininosuccinate synthase VM_01730 IPR023434 Argininosuccinate synthase, type 1 subfamily VM_01730 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_01730 IPR018223 Argininosuccinate synthase, conserved site VM_01730 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body VM_01735 IPR022761 Fumarate lyase, N-terminal VM_01735 IPR008948 L-Aspartase-like VM_01735 IPR029419 Argininosuccinate lyase, C-terminal VM_01735 IPR009049 Argininosuccinate lyase VM_01735 IPR024083 Fumarase/histidase, N-terminal VM_01735 IPR000362 Fumarate lyase family VM_01735 IPR020557 Fumarate lyase, conserved site VM_01750 IPR011906 Glutaredoxin domain VM_01750 IPR014025 Glutaredoxin subgroup VM_01750 IPR002109 Glutaredoxin VM_01750 IPR037944 Peroxiredoxin-5-like VM_01750 IPR013740 Redoxin VM_01750 IPR036249 Thioredoxin-like superfamily VM_01750 IPR011767 Glutaredoxin active site VM_01755 IPR000847 Transcription regulator HTH, LysR VM_01755 IPR005119 LysR, substrate-binding VM_01755 IPR036390 Winged helix DNA-binding domain superfamily VM_01755 IPR036388 Winged helix-like DNA-binding domain superfamily VM_01760 IPR012338 Beta-lactamase/transpeptidase-like VM_01760 IPR001264 Glycosyl transferase, family 51 VM_01760 IPR023346 Lysozyme-like domain superfamily VM_01760 IPR036950 Penicillin binding protein transglycosylase domain VM_01760 IPR031376 Penicillin-binding protein, OB-like domain VM_01760 IPR001460 Penicillin-binding protein, transpeptidase VM_01785 IPR005644 NolW-like VM_01785 IPR001775 GspD/PilQ family VM_01785 IPR013355 Type IV pilus secretin PilQ VM_01785 IPR011662 Secretin/TonB, short N-terminal domain VM_01785 IPR004846 Type II/III secretion system VM_01785 IPR004845 Type II secretion system GspD, conserved site VM_01785 IPR038591 NolW-like superfamily VM_01785 IPR021731 AMIN domain VM_01790 IPR031322 Shikimate kinase/gluconokinase VM_01790 IPR000623 Shikimate kinase/Threonine synthase-like 1 VM_01790 IPR023000 Shikimate kinase, conserved site VM_01790 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_01795 IPR016037 3-dehydroquinate synthase AroB VM_01795 IPR030963 3-dehydroquinate synthase family VM_01795 IPR030960 3-dehydroquinate synthase domain VM_01805 IPR023095 Adenine-specific methyltransferase, domain 2 VM_01805 IPR012327 D12 class N6 adenine-specific DNA methyltransferase VM_01805 IPR012263 Adenine modification methylase, M.EcoRV-type VM_01805 IPR002052 DNA methylase, N-6 adenine-specific, conserved site VM_01805 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VM_01810 IPR000056 Ribulose-phosphate 3-epimerase-like VM_01810 IPR011060 Ribulose-phosphate binding barrel VM_01810 IPR026019 Ribulose-phosphate 3-epimerase VM_01810 IPR013785 Aldolase-type TIM barrel VM_01815 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VM_01815 IPR041492 Haloacid dehalogenase-like hydrolase VM_01815 IPR006549 HAD-superfamily hydrolase,subfamily IIIA VM_01815 IPR006439 HAD hydrolase, subfamily IA VM_01815 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic VM_01815 IPR023214 HAD superfamily VM_01815 IPR037512 Phosphoglycolate phosphatase, prokaryotic VM_01815 IPR036412 HAD-like superfamily VM_01820 IPR002305 Aminoacyl-tRNA synthetase, class Ic VM_01820 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_01820 IPR002306 Tryptophan-tRNA ligase VM_01820 IPR024109 Tryptophan-tRNA ligase, bacterial-type VM_01835 IPR002792 TRAM domain VM_01835 IPR023404 Radical SAM, alpha/beta horseshoe VM_01835 IPR006638 Elp3/MiaB/NifB VM_01835 IPR007197 Radical SAM VM_01835 IPR005840 Ribosomal protein S12 methylthiotransferase RimO VM_01835 IPR038135 Methylthiotransferase, N-terminal domain superfamily VM_01835 IPR013848 Methylthiotransferase, N-terminal VM_01835 IPR020612 Methylthiotransferase, conserved site VM_01835 IPR041582 RimO, TRAM domain VM_01835 IPR005839 Methylthiotransferase VM_01840 IPR023753 FAD/NAD(P)-binding domain VM_01840 IPR036188 FAD/NAD(P)-binding domain superfamily VM_01845 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain VM_01845 IPR029062 Class I glutamine amidotransferase-like VM_01845 IPR017926 Glutamine amidotransferase VM_01850 IPR015424 Pyridoxal phosphate-dependent transferase VM_01850 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria VM_01850 IPR004636 Acetylornithine/Succinylornithine transaminase family VM_01850 IPR005814 Aminotransferase class-III VM_01850 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VM_01850 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VM_01855 IPR017650 Arginine N-succinyltransferase VM_01855 IPR007041 Arginine N-succinyltransferase AstA/AruG VM_01855 IPR016181 Acyl-CoA N-acyltransferase VM_01860 IPR016161 Aldehyde/histidinol dehydrogenase VM_01860 IPR016160 Aldehyde dehydrogenase, cysteine active site VM_01860 IPR029510 Aldehyde dehydrogenase, glutamic acid active site VM_01860 IPR016162 Aldehyde dehydrogenase, N-terminal VM_01860 IPR015590 Aldehyde dehydrogenase domain VM_01860 IPR016163 Aldehyde dehydrogenase, C-terminal VM_01860 IPR017649 Succinylglutamate-semialdehyde dehydrogenase VM_01870 IPR036388 Winged helix-like DNA-binding domain superfamily VM_01870 IPR036390 Winged helix DNA-binding domain superfamily VM_01870 IPR018335 Transcription regulator HTH, Crp-type, conserved site VM_01870 IPR014710 RmlC-like jelly roll fold VM_01870 IPR012318 Crp-type HTH domain VM_01870 IPR000595 Cyclic nucleotide-binding domain VM_01870 IPR018488 Cyclic nucleotide-binding, conserved site VM_01870 IPR018490 Cyclic nucleotide-binding-like VM_01875 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_01875 IPR006082 Phosphoribulokinase VM_01875 IPR006083 Phosphoribulokinase/uridine kinase VM_01880 IPR010648 Uncharacterised protein family UPF0270 VM_01880 IPR036685 YehU-like superfamily VM_01885 IPR000952 AB hydrolase 4, conserved site VM_01885 IPR029058 Alpha/Beta hydrolase fold VM_01885 IPR000073 Alpha/beta hydrolase fold-1 VM_01885 IPR012020 AB hydrolase 4 family VM_01895 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_01895 IPR003439 ABC transporter-like VM_01895 IPR032781 ABC-transporter extension domain VM_01895 IPR003593 AAA+ ATPase domain VM_01895 IPR017871 ABC transporter, conserved site VM_01900 IPR003680 Flavodoxin-like fold VM_01900 IPR029039 Flavoprotein-like superfamily VM_01900 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG VM_01905 IPR006153 Cation/H+ exchanger VM_01905 IPR004771 K+/H+ exchanger VM_01905 IPR020884 Glutathione-regulated potassium-efflux system protein KefB VM_01905 IPR038770 Sodium/solute symporter superfamily VM_01905 IPR036291 NAD(P)-binding domain superfamily VM_01905 IPR003148 Regulator of K+ conductance, N-terminal VM_01915 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VM_01920 IPR000246 Peptidase T2, asparaginase 2 VM_01920 IPR029055 Nucleophile aminohydrolases, N-terminal VM_01925 IPR018220 Adenylosuccinate synthase, GTP-binding site VM_01925 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_01925 IPR001114 Adenylosuccinate synthetase VM_01925 IPR042111 Adenylosuccinate synthetase, domain 3 VM_01925 IPR042110 Adenylosuccinate synthetase, domain 2 VM_01925 IPR042109 Adenylosuccinate synthetase, domain 1 VM_01925 IPR033128 Adenylosuccinate synthase, active site VM_01930 IPR006597 Sel1-like repeat VM_01930 IPR011990 Tetratricopeptide-like helical domain superfamily VM_01935 IPR024588 Inner membrane protein YejM, N-terminal VM_01935 IPR012159 Inner membrane protein YejM VM_01935 IPR000917 Sulfatase, N-terminal VM_01935 IPR017850 Alkaline-phosphatase-like, core domain superfamily VM_01940 IPR022967 RNA-binding domain, S1 VM_01940 IPR001900 Ribonuclease II/R VM_01940 IPR013223 Ribonuclease B, N-terminal OB domain VM_01940 IPR013668 Ribonuclease R winged-helix domain VM_01940 IPR004476 Ribonuclease II/ribonuclease R VM_01940 IPR011805 Ribonuclease R VM_01940 IPR022966 Ribonuclease II/R, conserved site VM_01940 IPR003029 S1 domain VM_01940 IPR011129 Cold shock domain VM_01940 IPR040476 RNase II/RNase R, cold shock domain VM_01940 IPR012340 Nucleic acid-binding, OB-fold VM_01945 IPR029028 Alpha/beta knot methyltransferases VM_01945 IPR029064 50S ribosomal protein L30e-like VM_01945 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB VM_01945 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VM_01945 IPR013123 RNA 2-O ribose methyltransferase, substrate binding VM_01945 IPR001537 tRNA/rRNA methyltransferase, SpoU type VM_01945 IPR004441 RNA methyltransferase TrmH family VM_01950 IPR036838 Ribosomal protein S10 domain superfamily VM_01950 IPR027486 Ribosomal protein S10 domain VM_01950 IPR018268 Ribosomal protein S10, conserved site VM_01950 IPR001848 Ribosomal protein S10 VM_01955 IPR000597 Ribosomal protein L3 VM_01955 IPR019927 Ribosomal protein L3, bacterial/organelle-type VM_01955 IPR019926 Ribosomal protein L3, conserved site VM_01955 IPR009000 Translation protein, beta-barrel domain superfamily VM_01960 IPR013005 50S ribosomal protein uL4 VM_01960 IPR023574 Ribosomal protein L4 domain superfamily VM_01960 IPR002136 Ribosomal protein L4/L1e VM_01965 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily VM_01965 IPR001014 Ribosomal protein L23/L25, conserved site VM_01965 IPR013025 Ribosomal protein L25/L23 VM_01965 IPR012678 Ribosomal protein L23/L15e core domain superfamily VM_01970 IPR008991 Translation protein SH3-like domain superfamily VM_01970 IPR014726 Ribosomal protein L2, domain 3 VM_01970 IPR022669 Ribosomal protein L2, C-terminal VM_01970 IPR005880 Ribosomal protein L2, bacterial/organellar-type VM_01970 IPR002171 Ribosomal protein L2 VM_01970 IPR022671 Ribosomal protein L2, conserved site VM_01970 IPR022666 Ribosomal Proteins L2, RNA binding domain VM_01970 IPR012340 Nucleic acid-binding, OB-fold VM_01970 IPR014722 Ribosomal protein L2, domain 2 VM_01975 IPR023575 Ribosomal protein S19, superfamily VM_01975 IPR020934 Ribosomal protein S19 conserved site VM_01975 IPR002222 Ribosomal protein S19/S15 VM_01975 IPR005732 Ribosomal protein S19, bacterial-type VM_01980 IPR001063 Ribosomal protein L22/L17 VM_01980 IPR018260 Ribosomal protein L22/L17, conserved site VM_01980 IPR036394 Ribosomal protein L22/L17 superfamily VM_01980 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type VM_01985 IPR004044 K Homology domain, type 2 VM_01985 IPR001351 Ribosomal protein S3, C-terminal VM_01985 IPR005704 Ribosomal protein S3, bacterial-type VM_01985 IPR009019 K homology domain superfamily, prokaryotic type VM_01985 IPR004087 K Homology domain VM_01985 IPR018280 Ribosomal protein S3, conserved site VM_01985 IPR036419 Ribosomal protein S3, C-terminal domain superfamily VM_01985 IPR015946 K homology domain-like, alpha/beta VM_01990 IPR016180 Ribosomal protein L10e/L16 VM_01990 IPR020798 Ribosomal protein L16, conserved site VM_01990 IPR036920 Ribosomal protein L10e/L16 superfamily VM_01990 IPR000114 Ribosomal protein L16 VM_01995 IPR018254 Ribosomal protein L29, conserved site VM_01995 IPR036049 Ribosomal protein L29/L35 superfamily VM_01995 IPR001854 Ribosomal protein L29/L35 VM_02000 IPR019979 Ribosomal protein S17, conserved site VM_02000 IPR019984 30S ribosomal protein S17 VM_02000 IPR012340 Nucleic acid-binding, OB-fold VM_02000 IPR000266 Ribosomal protein S17/S11 VM_02005 IPR036853 Ribosomal protein L14 superfamily VM_02005 IPR005745 Ribosomal protein L14P, bacterial-type VM_02005 IPR000218 Ribosomal protein L14P VM_02005 IPR019972 Ribosomal protein L14P, conserved site VM_02010 IPR003256 Ribosomal protein L24 VM_02010 IPR041988 Ribosomal Protein L26/L24, KOW domain VM_02010 IPR005824 KOW VM_02010 IPR014722 Ribosomal protein L2, domain 2 VM_02010 IPR008991 Translation protein SH3-like domain superfamily VM_02010 IPR005825 Ribosomal protein L24/L26, conserved site VM_02015 IPR002132 Ribosomal protein L5 VM_02015 IPR020929 Ribosomal protein L5, conserved site VM_02015 IPR022803 Ribosomal protein L5 domain superfamily VM_02015 IPR031310 Ribosomal protein L5, N-terminal VM_02015 IPR031309 Ribosomal protein L5, C-terminal VM_02015 IPR020930 Ribosomal protein L5, bacterial-type VM_02020 IPR001209 Ribosomal protein S14 VM_02020 IPR023036 Ribosomal protein S14, bacterial/plastid VM_02020 IPR018271 Ribosomal protein S14, conserved site VM_02025 IPR035987 Ribosomal protein S8 superfamily VM_02025 IPR000630 Ribosomal protein S8 VM_02030 IPR002358 Ribosomal protein L6, conserved site VM_02030 IPR019906 Ribosomal protein L6, bacterial-type VM_02030 IPR000702 Ribosomal protein L6 VM_02030 IPR020040 Ribosomal protein L6, alpha-beta domain VM_02030 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily VM_02035 IPR005484 Ribosomal protein L18 VM_02035 IPR004389 Ribosomal protein L18, bacterial-type VM_02040 IPR013810 Ribosomal protein S5, N-terminal VM_02040 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VM_02040 IPR020568 Ribosomal protein S5 domain 2-type fold VM_02040 IPR005324 Ribosomal protein S5, C-terminal VM_02040 IPR005712 Ribosomal protein S5, bacterial-type VM_02040 IPR000851 Ribosomal protein S5 VM_02040 IPR018192 Ribosomal protein S5, N-terminal, conserved site VM_02045 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain VM_02045 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily VM_02045 IPR005996 Ribosomal protein L30, bacterial-type VM_02045 IPR018038 Ribosomal protein L30, conserved site VM_02050 IPR036227 Ribosomal L18e/L15P superfamily VM_02050 IPR021131 Ribosomal protein L18e/L15P VM_02050 IPR001196 Ribosomal protein L15, conserved site VM_02050 IPR005749 Ribosomal protein L15, bacterial-type VM_02050 IPR030878 Ribosomal protein L15 VM_02055 IPR026593 Protein translocase subunit SecY VM_02055 IPR030659 SecY conserved site VM_02055 IPR002208 SecY/SEC61-alpha family VM_02055 IPR023201 SecY domain superfamily VM_02060 IPR035977 Ribosomal protein L36 superfamily VM_02060 IPR000473 Ribosomal protein L36 VM_02065 IPR019980 Ribosomal protein S13, bacterial-type VM_02065 IPR027437 30s ribosomal protein S13, C-terminal VM_02065 IPR018269 Ribosomal protein S13, conserved site VM_02065 IPR010979 Ribosomal protein S13-like, H2TH VM_02065 IPR001892 Ribosomal protein S13 VM_02070 IPR036967 Ribosomal protein S11 superfamily VM_02070 IPR001971 Ribosomal protein S11 VM_02070 IPR018102 Ribosomal S11, conserved site VM_02070 IPR019981 Ribosomal protein S11, bacterial-type VM_02075 IPR018079 Ribosomal protein S4, conserved site VM_02075 IPR036986 RNA-binding S4 domain superfamily VM_02075 IPR001912 Ribosomal protein S4/S9, N-terminal VM_02075 IPR022801 Ribosomal protein S4/S9 VM_02075 IPR002942 RNA-binding S4 domain VM_02075 IPR005709 Ribosomal protein S4, bacterial-type VM_02080 IPR011260 RNA polymerase, alpha subunit, C-terminal VM_02080 IPR036603 RNA polymerase, RBP11-like subunit VM_02080 IPR011773 DNA-directed RNA polymerase, alpha subunit VM_02080 IPR011262 DNA-directed RNA polymerase, insert domain VM_02080 IPR036643 DNA-directed RNA polymerase, insert domain superfamily VM_02080 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type VM_02085 IPR000456 Ribosomal protein L17 VM_02085 IPR036373 Ribosomal protein L17 superfamily VM_02095 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VM_02095 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal VM_02095 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily VM_02100 IPR007340 Opacity-associated protein A VM_02100 IPR013731 Opacity-associated protein A, N-terminal VM_02105 IPR000620 EamA domain VM_02110 IPR016181 Acyl-CoA N-acyltransferase VM_02110 IPR000182 GNAT domain VM_02115 IPR011545 DEAD/DEAH box helicase domain VM_02115 IPR014001 Helicase superfamily 1/2, ATP-binding domain VM_02115 IPR001650 Helicase, C-terminal VM_02115 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily VM_02115 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_02115 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VM_02115 IPR014014 RNA helicase, DEAD-box type, Q motif VM_02115 IPR028619 ATP-dependent RNA helicase DbpA VM_02115 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain VM_02130 IPR037115 Sirohaem synthase, dimerisation domain superfamily VM_02130 IPR014777 Tetrapyrrole methylase, subdomain 1 VM_02130 IPR012409 Sirohaem synthase VM_02130 IPR028281 Siroheme synthase, central domain VM_02130 IPR000878 Tetrapyrrole methylase VM_02130 IPR019478 Sirohaem synthase, dimerisation domain VM_02130 IPR036291 NAD(P)-binding domain superfamily VM_02130 IPR006367 Sirohaem synthase, N-terminal VM_02130 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site VM_02130 IPR006366 Uroporphyrin-III C-methyltransferase VM_02130 IPR014776 Tetrapyrrole methylase, subdomain 2 VM_02130 IPR035996 Tetrapyrrole methylase superfamily VM_02135 IPR002500 Phosphoadenosine phosphosulphate reductase VM_02135 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_02135 IPR011784 Sulphate adenylyltransferase, small subunit VM_02140 IPR011779 Sulphate adenylyltransferase, large subunit VM_02140 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain VM_02140 IPR031157 Tr-type G domain, conserved site VM_02140 IPR000795 Transcription factor, GTP-binding domain VM_02140 IPR009000 Translation protein, beta-barrel domain superfamily VM_02140 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VM_02140 IPR005225 Small GTP-binding protein domain VM_02140 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_02145 IPR002891 Adenylyl-sulfate kinase VM_02145 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_02165 IPR003439 ABC transporter-like VM_02165 IPR003593 AAA+ ATPase domain VM_02165 IPR017871 ABC transporter, conserved site VM_02165 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_02175 IPR019731 Protein of unknown function DUF2607 VM_02180 IPR006513 Conserved hypothetical protein CHP01626, YtfJ VM_02185 IPR002569 Peptide methionine sulphoxide reductase MsrA VM_02185 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily VM_02190 IPR035243 TamA, POTRA domain 1 VM_02190 IPR034746 POTRA domain VM_02190 IPR000184 Bacterial surface antigen (D15) VM_02190 IPR010827 POTRA domain, BamA/TamA-like VM_02190 IPR039910 Surface antigen D15-like VM_02195 IPR007452 Translocation and assembly module TamB VM_02200 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily VM_02200 IPR013024 Gamma-glutamyl cyclotransferase-like VM_02200 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like VM_02200 IPR039126 Gamma-glutamylaminecyclotransferase VM_02210 IPR008162 Inorganic pyrophosphatase VM_02210 IPR036649 Inorganic pyrophosphatase superfamily VM_02215 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal VM_02215 IPR020548 Fructose-1,6-bisphosphatase, active site VM_02215 IPR028343 Fructose-1,6-bisphosphatase VM_02215 IPR000146 Fructose-1,6-bisphosphatase class 1 VM_02225 IPR000713 Mur ligase, N-terminal catalytic domain VM_02225 IPR013221 Mur ligase, central VM_02225 IPR036615 Mur ligase, C-terminal domain superfamily VM_02225 IPR004101 Mur ligase, C-terminal VM_02225 IPR005757 Murein peptide ligase VM_02225 IPR036565 Mur-like, catalytic domain superfamily VM_02230 IPR004507 Flavin prenyltransferase UbiX-like VM_02230 IPR003382 Flavoprotein VM_02230 IPR036551 Flavin prenyltransferase-like VM_02240 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter VM_02240 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria VM_02240 IPR006061 Solute-binding family 1, conserved site VM_02245 IPR035906 MetI-like superfamily VM_02245 IPR005947 Thiamine ABC transporter, permease protein VM_02245 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VM_02250 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_02250 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ VM_02250 IPR017871 ABC transporter, conserved site VM_02250 IPR003593 AAA+ ATPase domain VM_02250 IPR003439 ABC transporter-like VM_02255 IPR006839 Ribosome-associated, YjgA VM_02255 IPR023153 PSPTO4464-like domain superfamily VM_02260 IPR002510 Metalloprotease TldD/PmbA VM_02260 IPR036059 Metalloprotease TldD/PmbA superfamily VM_02260 IPR035068 Metalloprotease TldD/PmbA, N-terminal VM_02265 IPR000644 CBS domain VM_02265 IPR006668 Magnesium transporter, MgtE intracellular domain VM_02265 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily VM_02265 IPR006667 SLC41 divalent cation transporters, integral membrane domain VM_02265 IPR006669 Magnesium transporter MgtE VM_02265 IPR038048 Magnesium transporter MgtE, transmembrane domain VM_02265 IPR038076 MgtE, N-terminal domain superfamily VM_02270 IPR035895 HPr-like superfamily VM_02270 IPR002114 Phosphotransferase system, HPr serine phosphorylation site VM_02270 IPR000032 Phosphocarrier protein HPr-like VM_02270 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site VM_02275 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_02275 IPR005337 RapZ-like family VM_02280 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN VM_02280 IPR002178 PTS EIIA type-2 domain VM_02280 IPR016152 Phosphotransferase/anion transporter VM_02285 IPR003489 Ribosome hibernation promoting factor/RaiA VM_02285 IPR036567 Ribosome hibernation promotion factor-like VM_02290 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily VM_02290 IPR007634 RNA polymerase sigma factor 54, DNA-binding VM_02290 IPR007046 RNA polymerase sigma factor 54, core-binding domain VM_02290 IPR000394 RNA polymerase sigma factor 54 VM_02295 IPR017871 ABC transporter, conserved site VM_02295 IPR003439 ABC transporter-like VM_02295 IPR003593 AAA+ ATPase domain VM_02295 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal VM_02295 IPR030921 LPS export ABC transporter, ATP-binding protein LptB VM_02295 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_02300 IPR014340 Lipopolysaccharide export system protein LptA VM_02300 IPR005653 Organic solvent tolerance-like, N-terminal VM_02310 IPR023214 HAD superfamily VM_02310 IPR036412 HAD-like superfamily VM_02310 IPR010023 KdsC family VM_02315 IPR001347 Sugar isomerase (SIS) VM_02315 IPR035474 KpsF-like, SIS domain VM_02315 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type VM_02315 IPR000644 CBS domain VM_02320 IPR004837 Sodium/calcium exchanger membrane region VM_02320 IPR004481 Sodium/potassium/calcium exchanger VM_02330 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_02330 IPR003439 ABC transporter-like VM_02330 IPR003593 AAA+ ATPase domain VM_02330 IPR017871 ABC transporter, conserved site VM_02330 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl VM_02335 IPR003453 ABC transport permease subunit MlaE, Proteobacteria VM_02335 IPR030802 ABC transporter permease MalE VM_02340 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD VM_02340 IPR003399 Mce/MlaD VM_02345 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC VM_02345 IPR042245 Tgt2/MlaC superfamily VM_02355 IPR036065 BolA-like superfamily VM_02355 IPR002634 BolA protein VM_02360 IPR001986 Enolpyruvate transferase domain VM_02360 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase VM_02360 IPR036968 Enolpyruvate transferase domain superfamily VM_02360 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta VM_02365 IPR002123 Phospholipid/glycerol acyltransferase VM_02365 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase VM_02370 IPR006175 YjgF/YER057c/UK114 family VM_02370 IPR035959 RutC-like superfamily VM_02370 IPR019897 RidA, conserved site VM_02370 IPR006056 RidA family VM_02375 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal VM_02375 IPR002801 Aspartate transcarbamylase regulatory subunit VM_02375 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal VM_02375 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily VM_02375 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily VM_02380 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding VM_02380 IPR002082 Aspartate carbamoyltransferase VM_02380 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily VM_02380 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain VM_02380 IPR006130 Aspartate/ornithine carbamoyltransferase VM_02385 IPR024904 Ornithine carbamoyltransferase VM_02385 IPR002292 Ornithine/putrescine carbamoyltransferase VM_02385 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain VM_02385 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily VM_02385 IPR006130 Aspartate/ornithine carbamoyltransferase VM_02385 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding VM_02390 IPR003714 PhoH-like protein VM_02390 IPR029060 PIN-like domain superfamily VM_02390 IPR002716 PIN domain VM_02390 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_02400 IPR000330 SNF2-related, N-terminal domain VM_02400 IPR040765 RapA, N-terminal Tudor like domain 1 VM_02400 IPR040766 RapA, N-terminal Tudor-like domain 2 VM_02400 IPR022737 RNA polymerase recycling, bacterial, C-terminal VM_02400 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_02400 IPR023949 RNA polymerase-associated protein RapA VM_02400 IPR001650 Helicase, C-terminal VM_02400 IPR014001 Helicase superfamily 1/2, ATP-binding domain VM_02400 IPR038718 SNF2-like, N-terminal domain superfamily VM_02405 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site VM_02405 IPR006145 Pseudouridine synthase, RsuA/RluA VM_02405 IPR020103 Pseudouridine synthase, catalytic domain superfamily VM_02410 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VM_02410 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VM_02410 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain VM_02410 IPR036291 NAD(P)-binding domain superfamily VM_02415 IPR010295 Protein of unknown function DUF898 VM_02425 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding VM_02425 IPR002300 Aminoacyl-tRNA synthetase, class Ia VM_02425 IPR033705 Valyl tRNA synthetase, anticodon-binding domain VM_02425 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding VM_02425 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_02425 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm VM_02425 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily VM_02425 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site VM_02425 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain VM_02425 IPR002303 Valine-tRNA ligase VM_02425 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm VM_02430 IPR036768 DNA polymerase III subunit chi superfamily VM_02430 IPR007459 DNA polymerase III chi subunit, HolC VM_02435 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B VM_02435 IPR023042 Peptidase M17, leucine aminopeptidase VM_02435 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal VM_02435 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal VM_02440 IPR030922 LPS export ABC transporter permease LptF VM_02440 IPR005495 Permease LptG/LptF-related VM_02445 IPR030923 LPS export ABC transporter permease LptG VM_02445 IPR005495 Permease LptG/LptF-related VM_02460 IPR037522 HD-GYP domain VM_02460 IPR001789 Signal transduction response regulator, receiver domain VM_02460 IPR003607 HD/PDEase domain VM_02460 IPR011006 CheY-like superfamily VM_02500 IPR033940 3-isopropylmalate dehydratase, swivel domain VM_02500 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain VM_02500 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VM_02500 IPR004431 3-isopropylmalate dehydratase, small subunit VM_02505 IPR004430 3-isopropylmalate dehydratase, large subunit VM_02505 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 VM_02505 IPR036008 Aconitase, iron-sulfur domain VM_02505 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain VM_02505 IPR018136 Aconitase family, 4Fe-4S cluster binding site VM_02505 IPR033941 3-Isopropylmalate dehydratase, catalytic domain VM_02510 IPR004429 Isopropylmalate dehydrogenase VM_02510 IPR024084 Isopropylmalate dehydrogenase-like domain VM_02510 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site VM_02515 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain VM_02515 IPR013785 Aldolase-type TIM barrel VM_02515 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily VM_02515 IPR005671 2-isopropylmalate synthase, bacterial-type VM_02515 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site VM_02515 IPR000891 Pyruvate carboxyltransferase VM_02525 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VM_02525 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily VM_02535 IPR036388 Winged helix-like DNA-binding domain superfamily VM_02535 IPR000847 Transcription regulator HTH, LysR VM_02535 IPR036390 Winged helix DNA-binding domain superfamily VM_02535 IPR005119 LysR, substrate-binding VM_02540 IPR000873 AMP-dependent synthetase/ligase VM_02540 IPR020845 AMP-binding, conserved site VM_02540 IPR042099 AMP-dependent synthetase-like superfamily VM_02545 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding VM_02545 IPR000399 TPP-binding enzyme, conserved site VM_02545 IPR029035 DHS-like NAD/FAD-binding domain superfamily VM_02545 IPR012000 Thiamine pyrophosphate enzyme, central domain VM_02545 IPR029061 Thiamin diphosphate-binding fold VM_02545 IPR039368 Acetolactate synthase large subunit, TPP binding domain VM_02545 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain VM_02545 IPR012846 Acetolactate synthase, large subunit, biosynthetic VM_02550 IPR004789 Acetolactate synthase, small subunit VM_02550 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal VM_02550 IPR019455 Acetolactate synthase, small subunit, C-terminal VM_02550 IPR002912 ACT domain VM_02550 IPR039557 AHAS, ACT domain VM_02555 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VM_02555 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 VM_02555 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain VM_02555 IPR036291 NAD(P)-binding domain superfamily VM_02555 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VM_02555 IPR002912 ACT domain VM_02560 IPR004788 Ribose 5-phosphate isomerase, type A VM_02560 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup VM_02560 IPR037171 NagB/RpiA transferase-like VM_02565 IPR002698 5-formyltetrahydrofolate cyclo-ligase VM_02565 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily VM_02565 IPR037171 NagB/RpiA transferase-like VM_02575 IPR036192 Cell division protein ZapA-like superfamily VM_02575 IPR023771 Cell division protein ZapA, eubacteria VM_02575 IPR007838 Cell division protein ZapA-like VM_02580 IPR011978 Uncharacterised protein family UPF0149 VM_02580 IPR036255 YgfB-like superfamily VM_02585 IPR002938 FAD-binding domain VM_02585 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 VM_02585 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase VM_02585 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site VM_02585 IPR036188 FAD/NAD(P)-binding domain superfamily VM_02590 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 VM_02590 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site VM_02590 IPR036188 FAD/NAD(P)-binding domain superfamily VM_02590 IPR002938 FAD-binding domain VM_02600 IPR023758 tRNA-modifying protein YgfZ VM_02600 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal VM_02600 IPR017703 YgfZ/GcvT conserved site VM_02605 IPR005631 Flavinator of succinate dehydrogenase VM_02605 IPR036714 Flavinator of succinate dehydrogenase superfamily VM_02615 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain VM_02615 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily VM_02615 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal VM_02615 IPR005288 L-aspartate oxidase VM_02615 IPR036188 FAD/NAD(P)-binding domain superfamily VM_02615 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily VM_02625 IPR036388 Winged helix-like DNA-binding domain superfamily VM_02625 IPR014286 RNA polymerase sigma-70 RpoE type VM_02625 IPR013325 RNA polymerase sigma factor, region 2 VM_02625 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 VM_02625 IPR007627 RNA polymerase sigma-70 region 2 VM_02625 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site VM_02625 IPR014284 RNA polymerase sigma-70 like domain VM_02625 IPR013324 RNA polymerase sigma factor, region 3/4-like VM_02625 IPR039425 RNA polymerase sigma-70 like VM_02630 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily VM_02630 IPR026279 Sigma-E factor negative regulatory protein RseA VM_02630 IPR005573 Anti sigma-E protein RseA, C-terminal VM_02630 IPR005572 Anti sigma-E protein RseA, N-terminal VM_02635 IPR005588 MucB/RseB VM_02635 IPR033434 MucB/RseB, N-terminal VM_02635 IPR038484 MucB/RseB, C-terminal domain superfamily VM_02635 IPR033436 MucB/RseB, C-terminal VM_02640 IPR007359 Positive regulator of sigma(E), RseC/MucC VM_02640 IPR026268 Protein RseC VM_02645 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_02645 IPR038363 LepA, C-terminal domain superfamily VM_02645 IPR006297 Elongation factor 4 VM_02645 IPR035647 EF-G domain III/V-like VM_02645 IPR035654 Elongation factor 4, domain IV VM_02645 IPR000640 Elongation factor EFG, domain V-like VM_02645 IPR004161 Translation elongation factor EFTu-like, domain 2 VM_02645 IPR031157 Tr-type G domain, conserved site VM_02645 IPR005225 Small GTP-binding protein domain VM_02645 IPR000795 Transcription factor, GTP-binding domain VM_02645 IPR013842 GTP-binding protein LepA, C-terminal VM_02645 IPR009000 Translation protein, beta-barrel domain superfamily VM_02650 IPR036286 LexA/Signal peptidase-like superfamily VM_02650 IPR000223 Peptidase S26A, signal peptidase I VM_02650 IPR019757 Peptidase S26A, signal peptidase I, lysine active site VM_02650 IPR019756 Peptidase S26A, signal peptidase I, serine active site VM_02650 IPR019533 Peptidase S26 VM_02650 IPR019758 Peptidase S26A, signal peptidase I, conserved site VM_02655 IPR014720 Double-stranded RNA-binding domain VM_02655 IPR000999 Ribonuclease III domain VM_02655 IPR011907 Ribonuclease III VM_02655 IPR036389 Ribonuclease III, endonuclease domain superfamily VM_02660 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_02660 IPR005225 Small GTP-binding protein domain VM_02660 IPR009019 K homology domain superfamily, prokaryotic type VM_02660 IPR030388 Era-type guanine nucleotide-binding (G) domain VM_02660 IPR005662 GTP-binding protein Era VM_02660 IPR006073 GTP binding domain VM_02660 IPR015946 K homology domain-like, alpha/beta VM_02660 IPR004044 K Homology domain, type 2 VM_02665 IPR022572 DNA replication/recombination mediator RecO, N-terminal VM_02665 IPR012340 Nucleic acid-binding, OB-fold VM_02665 IPR037278 ARFGAP/RecO-like zinc finger VM_02665 IPR003717 Recombination protein O, RecO VM_02670 IPR013785 Aldolase-type TIM barrel VM_02670 IPR036130 Pyridoxine 5'-phosphate synthase VM_02670 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ VM_02675 IPR008278 4'-phosphopantetheinyl transferase domain VM_02675 IPR037143 4'-phosphopantetheinyl transferase domain superfamily VM_02675 IPR002582 Holo-[acyl carrier protein] synthase VM_02675 IPR004568 Phosphopantetheine-protein transferase domain VM_02695 IPR011006 CheY-like superfamily VM_02695 IPR001789 Signal transduction response regulator, receiver domain VM_02695 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain VM_02695 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_02695 IPR019247 Histidine kinase BarA, N-terminal VM_02695 IPR036641 HPT domain superfamily VM_02695 IPR005467 Histidine kinase domain VM_02695 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VM_02695 IPR003594 Histidine kinase/HSP90-like ATPase VM_02695 IPR003660 HAMP domain VM_02695 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VM_02695 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VM_02700 IPR010280 (Uracil-5)-methyltransferase family VM_02700 IPR002792 TRAM domain VM_02700 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VM_02700 IPR012340 Nucleic acid-binding, OB-fold VM_02700 IPR030391 RNA methyltransferase TrmA, conserved site VM_02700 IPR030390 RNA methyltransferase TrmA, active site VM_02700 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD VM_02705 IPR004811 RelA/SpoT family VM_02705 IPR007685 RelA/SpoT VM_02705 IPR004095 TGS VM_02705 IPR012676 TGS-like VM_02705 IPR033655 RelA, TGS domain VM_02705 IPR003607 HD/PDEase domain VM_02705 IPR012675 Beta-grasp domain superfamily VM_02705 IPR002912 ACT domain VM_02710 IPR011551 NTP pyrophosphohydrolase MazG VM_02710 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core VM_02720 IPR004468 CTP synthase VM_02720 IPR029062 Class I glutamine amidotransferase-like VM_02720 IPR017456 CTP synthase, N-terminal VM_02720 IPR017926 Glutamine amidotransferase VM_02720 IPR033828 CTP synthase GATase domain VM_02720 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_02725 IPR020811 Enolase, N-terminal VM_02725 IPR020809 Enolase, conserved site VM_02725 IPR020810 Enolase, C-terminal TIM barrel domain VM_02725 IPR029017 Enolase-like, N-terminal VM_02725 IPR036849 Enolase-like, C-terminal domain superfamily VM_02725 IPR000941 Enolase VM_02735 IPR018227 Amino acid/polyamine transporter 2 VM_02735 IPR013061 Tryptophan/tryrosine permease, conserved site VM_02735 IPR013059 Tryptophan/tyrosine transporter VM_02740 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VM_02740 IPR013441 Tyrosine phenol-lyase VM_02740 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VM_02740 IPR018176 Tryptophanase, conserved site VM_02740 IPR015424 Pyridoxal phosphate-dependent transferase VM_02740 IPR011166 Beta-eliminating lyase family VM_02740 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase VM_02745 IPR012006 tRNA nucleotidyltransferase, proteobacteria VM_02745 IPR003607 HD/PDEase domain VM_02745 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain VM_02745 IPR002646 Poly A polymerase, head domain VM_02745 IPR006674 HD domain VM_02750 IPR003593 AAA+ ATPase domain VM_02750 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_02750 IPR002477 Peptidoglycan binding-like VM_02750 IPR036365 PGBD-like superfamily VM_02750 IPR036366 PGBD superfamily VM_02760 IPR016476 SH3 domain protein VM_02760 IPR003646 SH3-like domain, bacterial-type VM_02765 IPR001204 Phosphate transporter VM_02770 IPR002727 Protein of unknown function DUF47 VM_02770 IPR038078 PhoU-like domain superfamily VM_02770 IPR018445 Putative phosphate transport regulator VM_02775 IPR033469 CYTH-like domain superfamily VM_02775 IPR007899 CHAD domain VM_02775 IPR039013 Inorganic triphosphatase YgiF VM_02775 IPR023577 CYTH domain VM_02780 IPR000595 Cyclic nucleotide-binding domain VM_02780 IPR005821 Ion transport domain VM_02780 IPR014710 RmlC-like jelly roll fold VM_02780 IPR018490 Cyclic nucleotide-binding-like VM_02780 IPR028325 Voltage-gated potassium channel VM_02780 IPR018488 Cyclic nucleotide-binding, conserved site VM_02785 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_02785 IPR003660 HAMP domain VM_02785 IPR029151 Periplasmic sensor-like domain superfamily VM_02785 IPR033479 Double Cache domain 1 VM_02790 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme VM_02790 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain VM_02790 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase VM_02795 IPR023030 Bifunctional protein HldE VM_02795 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site VM_02795 IPR004821 Cytidyltransferase-like domain VM_02795 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_02795 IPR029056 Ribokinase-like VM_02795 IPR011914 RfaE bifunctional protein, domain II VM_02795 IPR011913 RfaE bifunctional protein, domain I VM_02795 IPR011611 Carbohydrate kinase PfkB VM_02800 IPR003423 Outer membrane efflux protein VM_02800 IPR010130 Type I secretion outer membrane protein, TolC VM_02805 IPR000086 NUDIX hydrolase domain VM_02805 IPR020084 NUDIX hydrolase, conserved site VM_02805 IPR015797 NUDIX hydrolase-like domain superfamily VM_02805 IPR004385 Nucleoside diphosphate pyrophosphatase VM_02810 IPR009659 Protein of unknown function DUF1249 VM_02815 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type VM_02815 IPR029052 Metallo-dependent phosphatase-like VM_02815 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA VM_02820 IPR029058 Alpha/Beta hydrolase fold VM_02820 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA VM_02825 IPR002288 DNA gyrase B subunit, C-terminal VM_02825 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 VM_02825 IPR003594 Histidine kinase/HSP90-like ATPase VM_02825 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VM_02825 IPR020568 Ribosomal protein S5 domain 2-type fold VM_02825 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VM_02825 IPR001241 DNA topoisomerase, type IIA VM_02825 IPR013760 DNA topoisomerase, type IIA-like domain superfamily VM_02825 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal VM_02825 IPR006171 TOPRIM domain VM_02825 IPR018522 DNA topoisomerase, type IIA, conserved site VM_02825 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative VM_02830 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative VM_02830 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily VM_02830 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta VM_02830 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal VM_02830 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat VM_02830 IPR013760 DNA topoisomerase, type IIA-like domain superfamily VM_02830 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal VM_02835 IPR005584 DNA gyrase inhibitor YacG VM_02835 IPR013088 Zinc finger, NHR/GATA-type VM_02840 IPR036268 ZapD domain superfamily VM_02840 IPR027462 Z ring-associated protein D, C-terminal VM_02840 IPR009777 Cell division protein ZapD VM_02845 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_02845 IPR001977 Dephospho-CoA kinase VM_02850 IPR000045 Prepilin type IV endopeptidase, peptidase domain VM_02850 IPR010627 Peptidase A24A, N-terminal VM_02850 IPR014032 Peptidase A24A, prepilin type IV, bacterial VM_02855 IPR001992 Type II secretion system conserved site VM_02855 IPR042094 Type II secretion system F domain superfamily VM_02855 IPR003004 GspF/PilC family VM_02855 IPR018076 Type II secretion system F domain VM_02860 IPR013374 ATPase, type IV, pilus assembly, PilB VM_02860 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_02860 IPR001482 Type II/IV secretion system protein VM_02860 IPR037257 General secretory system II, protein E, N-terminal superfamily VM_02860 IPR042181 Type II secretion system, protein E, N-terminal VM_02860 IPR007831 General secretory system II, protein E, N-terminal VM_02865 IPR001082 Fimbrial protein pilin VM_02865 IPR012902 Prokaryotic N-terminal methylation site VM_02870 IPR013785 Aldolase-type TIM barrel VM_02870 IPR004393 Nicotinate-nucleotide pyrophosphorylase VM_02870 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD VM_02870 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal VM_02870 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily VM_02870 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal VM_02870 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal VM_02875 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily VM_02875 IPR002502 N-acetylmuramoyl-L-alanine amidase domain VM_02880 IPR001226 Flavodoxin, conserved site VM_02880 IPR029039 Flavoprotein-like superfamily VM_02880 IPR008254 Flavodoxin/nitric oxide synthase VM_02880 IPR010086 Flavodoxin, long chain VM_02885 IPR010998 Integrase/recombinase, N-terminal VM_02885 IPR023009 Tyrosine recombinase XerC/XerD VM_02885 IPR011932 Tyrosine recombinase XerD VM_02885 IPR011010 DNA breaking-rejoining enzyme, catalytic core VM_02885 IPR013762 Integrase-like, catalytic domain superfamily VM_02885 IPR002104 Integrase, catalytic domain VM_02885 IPR004107 Integrase, SAM-like, N-terminal VM_02890 IPR012336 Thioredoxin-like fold VM_02890 IPR017937 Thioredoxin, conserved site VM_02890 IPR013766 Thioredoxin domain VM_02890 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily VM_02890 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal VM_02890 IPR033954 Disulphide bond isomerase, DsbC/G VM_02890 IPR036249 Thioredoxin-like superfamily VM_02895 IPR041122 RecJ, OB domain VM_02895 IPR004610 Bacterial RecJ exonuclease VM_02895 IPR003156 DHHA1 domain VM_02895 IPR001667 DDH domain VM_02895 IPR038763 DHH phosphoesterase superfamily VM_02900 IPR038763 DHH phosphoesterase superfamily VM_02900 IPR001667 DDH domain VM_02900 IPR038222 DHHA2 domain superfamily VM_02900 IPR004097 DHHA2 domain VM_02900 IPR022934 Manganese-dependent inorganic pyrophosphatase, probable VM_02905 IPR041827 CpdB, N-terminal metallophosphatase domain VM_02905 IPR008334 5'-Nucleotidase, C-terminal VM_02905 IPR036907 5'-Nucleotidase, C-terminal domain superfamily VM_02905 IPR006146 5'-Nucleotidase, conserved site VM_02905 IPR006179 5'-Nucleotidase/apyrase VM_02905 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type VM_02905 IPR019931 LPXTG cell wall anchor domain VM_02905 IPR029052 Metallo-dependent phosphatase-like VM_02910 IPR011711 GntR, C-terminal VM_02910 IPR000524 Transcription regulator HTH, GntR VM_02910 IPR036388 Winged helix-like DNA-binding domain superfamily VM_02910 IPR008920 Transcription regulator FadR/GntR, C-terminal VM_02910 IPR036390 Winged helix DNA-binding domain superfamily VM_02915 IPR005474 Transketolase, N-terminal VM_02915 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II VM_02915 IPR029061 Thiamin diphosphate-binding fold VM_02915 IPR041621 Pyruvate dehydrogenase E1 component, middle domain VM_02915 IPR004660 Pyruvate dehydrogenase E1 component VM_02915 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal VM_02920 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site VM_02920 IPR004167 Peripheral subunit-binding domain VM_02920 IPR000089 Biotin/lipoyl attachment VM_02920 IPR011053 Single hybrid motif VM_02920 IPR036625 E3-binding domain superfamily VM_02920 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex VM_02920 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily VM_02920 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain VM_02925 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site VM_02925 IPR036188 FAD/NAD(P)-binding domain superfamily VM_02925 IPR023753 FAD/NAD(P)-binding domain VM_02925 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily VM_02925 IPR006258 Dihydrolipoamide dehydrogenase VM_02925 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I VM_02925 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VM_02935 IPR002903 Ribosomal RNA small subunit methyltransferase H VM_02935 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily VM_02935 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VM_02940 IPR011922 Cell division protein FtsL VM_02945 IPR036138 Penicillin-binding protein, dimerisation domain superfamily VM_02945 IPR005311 Penicillin-binding protein, dimerisation domain VM_02945 IPR012338 Beta-lactamase/transpeptidase-like VM_02945 IPR037532 Peptidoglycan D,D-transpeptidase FtsI VM_02945 IPR001460 Penicillin-binding protein, transpeptidase VM_02950 IPR036565 Mur-like, catalytic domain superfamily VM_02950 IPR000713 Mur ligase, N-terminal catalytic domain VM_02950 IPR013221 Mur ligase, central VM_02950 IPR036615 Mur ligase, C-terminal domain superfamily VM_02950 IPR004101 Mur ligase, C-terminal VM_02950 IPR035911 MurE/MurF, N-terminal VM_02950 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase VM_02955 IPR036615 Mur ligase, C-terminal domain superfamily VM_02955 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase VM_02955 IPR035911 MurE/MurF, N-terminal VM_02955 IPR004101 Mur ligase, C-terminal VM_02955 IPR036565 Mur-like, catalytic domain superfamily VM_02955 IPR000713 Mur ligase, N-terminal catalytic domain VM_02955 IPR013221 Mur ligase, central VM_02960 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site VM_02960 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase VM_02960 IPR000715 Glycosyl transferase, family 4 VM_02965 IPR036565 Mur-like, catalytic domain superfamily VM_02965 IPR036615 Mur ligase, C-terminal domain superfamily VM_02965 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase VM_02965 IPR004101 Mur ligase, C-terminal VM_02965 IPR013221 Mur ligase, central VM_02970 IPR013437 Probable peptidoglycan glycosyltransferase FtsW VM_02970 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA VM_02970 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site VM_02975 IPR004276 Glycosyltransferase family 28, N-terminal domain VM_02975 IPR007235 Glycosyl transferase, family 28, C-terminal VM_02975 IPR006009 N-acetylglucosaminyltransferase, MurG VM_02980 IPR036565 Mur-like, catalytic domain superfamily VM_02980 IPR005758 UDP-N-acetylmuramate--L-alanine ligase VM_02980 IPR000713 Mur ligase, N-terminal catalytic domain VM_02980 IPR013221 Mur ligase, central VM_02980 IPR036615 Mur ligase, C-terminal domain superfamily VM_02980 IPR004101 Mur ligase, C-terminal VM_02985 IPR005548 Cell division protein FtsQ/DivIB VM_02985 IPR013685 POTRA domain, FtsQ-type VM_02985 IPR034746 POTRA domain VM_02985 IPR026579 Cell division protein FtsQ VM_02990 IPR003494 SHS2 domain inserted in FtsA VM_02990 IPR020823 Cell division protein FtsA VM_02995 IPR000158 Cell division protein FtsZ VM_02995 IPR020805 Cell division protein FtsZ, conserved site VM_02995 IPR003008 Tubulin/FtsZ, GTPase domain VM_02995 IPR036525 Tubulin/FtsZ, GTPase domain superfamily VM_02995 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain VM_02995 IPR008280 Tubulin/FtsZ, C-terminal VM_02995 IPR024757 Cell division protein FtsZ, C-terminal VM_03000 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal VM_03000 IPR020568 Ribosomal protein S5 domain 2-type fold VM_03000 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase VM_03000 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal VM_03010 IPR011115 SecA DEAD-like, N-terminal VM_03010 IPR000185 Protein translocase subunit SecA VM_03010 IPR004027 SEC-C motif VM_03010 IPR014018 SecA motor DEAD VM_03010 IPR011130 SecA, preprotein cross-linking domain VM_03010 IPR011116 SecA Wing/Scaffold VM_03010 IPR036266 SecA, Wing/Scaffold superfamily VM_03010 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_03010 IPR036670 SecA, preprotein cross-linking domain superfamily VM_03010 IPR020937 SecA conserved site VM_03015 IPR015797 NUDIX hydrolase-like domain superfamily VM_03015 IPR020084 NUDIX hydrolase, conserved site VM_03015 IPR020476 NUDIX hydrolase VM_03015 IPR000086 NUDIX hydrolase domain VM_03015 IPR003561 Mutator MutT VM_03020 IPR036291 NAD(P)-binding domain superfamily VM_03020 IPR023940 Dihydrodipicolinate reductase VM_03020 IPR022664 Dihydrodipicolinate reductase, conserved site VM_03020 IPR000846 Dihydrodipicolinate reductase, N-terminal VM_03020 IPR022663 Dihydrodipicolinate reductase, C-terminal VM_03025 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain VM_03025 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily VM_03025 IPR029062 Class I glutamine amidotransferase-like VM_03025 IPR017926 Glutamine amidotransferase VM_03025 IPR006274 Carbamoyl-phosphate synthase, small subunit VM_03025 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain VM_03030 IPR011607 Methylglyoxal synthase-like domain VM_03030 IPR016185 Pre-ATP-grasp domain superfamily VM_03030 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain VM_03030 IPR036914 Methylglyoxal synthase-like domain superfamily VM_03030 IPR011761 ATP-grasp fold VM_03030 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain VM_03030 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily VM_03030 IPR006275 Carbamoyl-phosphate synthase, large subunit VM_03030 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain VM_03030 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain VM_03035 IPR002781 Transmembrane protein TauE-like VM_03040 IPR000847 Transcription regulator HTH, LysR VM_03040 IPR036390 Winged helix DNA-binding domain superfamily VM_03040 IPR036388 Winged helix-like DNA-binding domain superfamily VM_03040 IPR005119 LysR, substrate-binding VM_03045 IPR005115 Uncharacterised domain UPF0126 VM_03050 IPR023544 ABC transporter, vitamin B12-binding protein VM_03050 IPR002491 ABC transporter periplasmic binding domain VM_03060 IPR035994 Nucleoside phosphorylase superfamily VM_03060 IPR000845 Nucleoside phosphorylase domain VM_03060 IPR010049 MTA/SAH nucleosidase VM_03070 IPR036188 FAD/NAD(P)-binding domain superfamily VM_03070 IPR009051 Alpha-helical ferredoxin VM_03070 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 VM_03070 IPR023753 FAD/NAD(P)-binding domain VM_03070 IPR028261 Dihydroprymidine dehydrogenase domain II VM_03070 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VM_03075 IPR013785 Aldolase-type TIM barrel VM_03075 IPR029055 Nucleophile aminohydrolases, N-terminal VM_03075 IPR017932 Glutamine amidotransferase type 2 domain VM_03075 IPR002489 Glutamate synthase, alpha subunit, C-terminal VM_03075 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily VM_03075 IPR002932 Glutamate synthase domain VM_03075 IPR006982 Glutamate synthase, central-N VM_03080 IPR028261 Dihydroprymidine dehydrogenase domain II VM_03080 IPR009051 Alpha-helical ferredoxin VM_03080 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 VM_03080 IPR023753 FAD/NAD(P)-binding domain VM_03080 IPR036188 FAD/NAD(P)-binding domain superfamily VM_03085 IPR002932 Glutamate synthase domain VM_03085 IPR029055 Nucleophile aminohydrolases, N-terminal VM_03085 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily VM_03085 IPR002489 Glutamate synthase, alpha subunit, C-terminal VM_03085 IPR013785 Aldolase-type TIM barrel VM_03085 IPR006982 Glutamate synthase, central-N VM_03085 IPR017932 Glutamine amidotransferase type 2 domain VM_03090 IPR005911 Protein YhcC-like VM_03090 IPR023404 Radical SAM, alpha/beta horseshoe VM_03090 IPR007197 Radical SAM VM_03090 IPR032432 Radical SAM, C-terminal extension VM_03090 IPR006638 Elp3/MiaB/NifB VM_03090 IPR039661 ELP3/YhcC VM_03095 IPR029016 GAF-like domain superfamily VM_03095 IPR000160 GGDEF domain VM_03095 IPR013515 Phytochrome, central region VM_03095 IPR001294 Phytochrome VM_03095 IPR001633 EAL domain VM_03095 IPR016132 Phytochrome chromophore attachment domain VM_03095 IPR029787 Nucleotide cyclase VM_03095 IPR003018 GAF domain VM_03095 IPR035919 EAL domain superfamily VM_03100 IPR003594 Histidine kinase/HSP90-like ATPase VM_03100 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VM_03100 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily VM_03100 IPR001789 Signal transduction response regulator, receiver domain VM_03100 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VM_03100 IPR040642 Histidine kinase receptor ArcB, transmembrane domain VM_03100 IPR036641 HPT domain superfamily VM_03100 IPR011006 CheY-like superfamily VM_03100 IPR000700 PAS-associated, C-terminal VM_03100 IPR035965 PAS domain superfamily VM_03100 IPR013767 PAS fold VM_03100 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_03100 IPR005467 Histidine kinase domain VM_03100 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain VM_03100 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VM_03100 IPR000014 PAS domain VM_03100 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB VM_03105 IPR039420 Transcriptional regulatory protein WalR-like VM_03105 IPR036388 Winged helix-like DNA-binding domain superfamily VM_03105 IPR011006 CheY-like superfamily VM_03105 IPR016032 Signal transduction response regulator, C-terminal effector VM_03105 IPR001867 OmpR/PhoB-type DNA-binding domain VM_03105 IPR001789 Signal transduction response regulator, receiver domain VM_03115 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily VM_03115 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VM_03115 IPR010203 Regulator of ribonuclease activity A VM_03125 IPR001341 Aspartate kinase VM_03125 IPR036393 Acetylglutamate kinase-like superfamily VM_03125 IPR002912 ACT domain VM_03125 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain VM_03125 IPR036291 NAD(P)-binding domain superfamily VM_03125 IPR018042 Aspartate kinase, conserved site VM_03125 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding VM_03125 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I VM_03125 IPR027795 CASTOR, ACT domain VM_03125 IPR001342 Homoserine dehydrogenase, catalytic VM_03125 IPR001048 Aspartate/glutamate/uridylate kinase VM_03125 IPR019811 Homoserine dehydrogenase, conserved site VM_03130 IPR006204 GHMP kinase N-terminal domain VM_03130 IPR006203 GHMP kinase, ATP-binding, conserved site VM_03130 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VM_03130 IPR020568 Ribosomal protein S5 domain 2-type fold VM_03130 IPR013750 GHMP kinase, C-terminal domain VM_03130 IPR000870 Homoserine kinase VM_03130 IPR036554 GHMP kinase, C-terminal domain superfamily VM_03135 IPR029144 Threonine synthase, N-terminal VM_03135 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site VM_03135 IPR001926 Pyridoxal-phosphate dependent enzyme VM_03135 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VM_03135 IPR004450 Threonine synthase-like VM_03135 IPR037158 Threonine synthase, N-terminal domain superfamily VM_03140 IPR001150 Glycine radical domain VM_03140 IPR011140 Autonomous glycyl radical cofactor GrcA VM_03140 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VM_03145 IPR001719 AP endonuclease 2 VM_03145 IPR018246 AP endonuclease 2, zinc binding site VM_03145 IPR036237 Xylose isomerase-like superfamily VM_03145 IPR013022 Xylose isomerase-like, TIM barrel domain VM_03150 IPR036895 Uracil-DNA glycosylase-like domain superfamily VM_03150 IPR005122 Uracil-DNA glycosylase-like VM_03150 IPR002043 Uracil-DNA glycosylase family 1 VM_03150 IPR018085 Uracil-DNA glycosylase, active site VM_03160 IPR009057 Homeobox-like domain superfamily VM_03160 IPR038965 Transposase InsF-like VM_03170 IPR001463 Sodium:alanine symporter VM_03175 IPR005583 Peroxide stress protein YaaA VM_03180 IPR001130 TatD family VM_03180 IPR032466 Metal-dependent hydrolase VM_03180 IPR018228 Deoxyribonuclease, TatD-related, conserved site VM_03185 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain VM_03185 IPR002668 Concentrative nucleoside transporter N-terminal domain VM_03185 IPR008276 Concentrative nucleoside transporter VM_03185 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial VM_03185 IPR011657 Concentrative nucleoside transporter C-terminal domain VM_03195 IPR013785 Aldolase-type TIM barrel VM_03195 IPR002915 DeoC/FbaB/ lacD aldolase VM_03195 IPR011343 Deoxyribose-phosphate aldolase VM_03195 IPR023649 Deoxyribose-phosphate aldolase type II VM_03200 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily VM_03200 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily VM_03200 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal VM_03200 IPR017459 Glycosyl transferase family 3, N-terminal domain VM_03200 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic VM_03200 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site VM_03200 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase VM_03200 IPR013465 Thymidine phosphorylase VM_03200 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily VM_03200 IPR000312 Glycosyl transferase, family 3 VM_03205 IPR006124 Metalloenzyme VM_03205 IPR010045 Phosphopentomutase VM_03205 IPR024052 Phosphopentomutase DeoB cap domain superfamily VM_03205 IPR017850 Alkaline-phosphatase-like, core domain superfamily VM_03210 IPR004402 Purine nucleoside phosphorylase DeoD-type VM_03210 IPR035994 Nucleoside phosphorylase superfamily VM_03210 IPR000845 Nucleoside phosphorylase domain VM_03210 IPR018016 Nucleoside phosphorylase, conserved site VM_03220 IPR023190 Phosphoserine phosphatase, domain 2 VM_03220 IPR041449 Phosphoserine phosphatase, N-terminal VM_03220 IPR036412 HAD-like superfamily VM_03220 IPR023214 HAD superfamily VM_03230 IPR003593 AAA+ ATPase domain VM_03230 IPR004504 DNA repair protein RadA VM_03230 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_03230 IPR041166 LapB, rubredoxin metal binding domain VM_03230 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VM_03230 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain VM_03230 IPR020568 Ribosomal protein S5 domain 2-type fold VM_03235 IPR020568 Ribosomal protein S5 domain 2-type fold VM_03235 IPR041095 Elongation Factor G, domain II VM_03235 IPR005517 Translation elongation factor EFG/EF2, domain IV VM_03235 IPR004540 Translation elongation factor EFG/EF2 VM_03235 IPR009000 Translation protein, beta-barrel domain superfamily VM_03235 IPR035647 EF-G domain III/V-like VM_03235 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VM_03235 IPR035649 EFG, domain V VM_03235 IPR000640 Elongation factor EFG, domain V-like VM_03235 IPR009022 Elongation factor G, domain III VM_03235 IPR004161 Translation elongation factor EFTu-like, domain 2 VM_03235 IPR031157 Tr-type G domain, conserved site VM_03235 IPR000795 Transcription factor, GTP-binding domain VM_03235 IPR005225 Small GTP-binding protein domain VM_03235 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_03240 IPR036388 Winged helix-like DNA-binding domain superfamily VM_03240 IPR000847 Transcription regulator HTH, LysR VM_03240 IPR005119 LysR, substrate-binding VM_03240 IPR036390 Winged helix DNA-binding domain superfamily VM_03250 IPR042099 AMP-dependent synthetase-like superfamily VM_03250 IPR000873 AMP-dependent synthetase/ligase VM_03250 IPR020845 AMP-binding, conserved site VM_03255 IPR003607 HD/PDEase domain VM_03255 IPR001789 Signal transduction response regulator, receiver domain VM_03255 IPR037522 HD-GYP domain VM_03255 IPR011006 CheY-like superfamily VM_03265 IPR006101 Glycoside hydrolase, family 2 VM_03265 IPR013783 Immunoglobulin-like fold VM_03265 IPR014718 Glycoside hydrolase-type carbohydrate-binding VM_03265 IPR032312 Beta-galactosidase, domain 4 VM_03265 IPR008979 Galactose-binding-like domain superfamily VM_03265 IPR011013 Galactose mutarotase-like domain superfamily VM_03265 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily VM_03265 IPR004199 Beta galactosidase small chain/ domain 5 VM_03265 IPR023232 Glycoside hydrolase, family 2, active site VM_03265 IPR006103 Glycoside hydrolase family 2, catalytic domain VM_03265 IPR023230 Glycoside hydrolase, family 2, conserved site VM_03265 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich VM_03265 IPR006104 Glycosyl hydrolases family 2, sugar binding domain VM_03265 IPR017853 Glycoside hydrolase superfamily VM_03265 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase VM_03270 IPR000843 LacI-type HTH domain VM_03270 IPR028082 Periplasmic binding protein-like I VM_03270 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VM_03275 IPR002547 tRNA-binding domain VM_03275 IPR012340 Nucleic acid-binding, OB-fold VM_03285 IPR023714 Zinc transport protein ZntB VM_03285 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB VM_03290 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX VM_03290 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily VM_03290 IPR006037 Regulator of K+ conductance, C-terminal VM_03290 IPR013815 ATP-grasp fold, subdomain 1 VM_03290 IPR013651 ATP-grasp fold, RimK-type VM_03290 IPR011761 ATP-grasp fold VM_03290 IPR041107 RimK, PreATP-grasp domain VM_03295 IPR016181 Acyl-CoA N-acyltransferase VM_03295 IPR017255 Acetyltransferase, GNAT, predicted VM_03295 IPR023072 Acetyltransferase, YpeA VM_03295 IPR000182 GNAT domain VM_03305 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain VM_03305 IPR001451 Hexapeptide repeat VM_03305 IPR038361 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain superfamily VM_03305 IPR011004 Trimeric LpxA-like superfamily VM_03305 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family VM_03305 IPR019876 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, gammaproteobacteria VM_03315 IPR009813 Uncharacterised protein family YebG VM_03315 IPR038627 YebG-like superfamily VM_03330 IPR013986 DExx box DNA helicase domain superfamily VM_03330 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_03330 IPR006697 RecBCD enzyme subunit RecC VM_03330 IPR041500 RecC, C-terminal VM_03330 IPR011335 Restriction endonuclease type II-like VM_03335 IPR014016 UvrD-like helicase, ATP-binding domain VM_03335 IPR011335 Restriction endonuclease type II-like VM_03335 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type VM_03335 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_03335 IPR011604 Exonuclease, phage-type/RecB, C-terminal VM_03335 IPR000212 DNA helicase, UvrD/REP type VM_03335 IPR034739 UvrD/AddA helicase, N-terminal VM_03335 IPR004586 RecBCD enzyme subunit RecB VM_03335 IPR014017 UvrD-like DNA helicase, C-terminal VM_03340 IPR027785 UvrD-like helicase C-terminal domain VM_03340 IPR041851 RecBCD enzyme subunit RecD, N-terminal domain VM_03340 IPR003593 AAA+ ATPase domain VM_03340 IPR006344 RecBCD enzyme subunit RecD VM_03340 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_03355 IPR016181 Acyl-CoA N-acyltransferase VM_03355 IPR000182 GNAT domain VM_03355 IPR036393 Acetylglutamate kinase-like superfamily VM_03355 IPR033719 N-acetylglutamate synthase, kinase-like domain VM_03355 IPR010167 Amino-acid N-acetyltransferase VM_03355 IPR001048 Aspartate/glutamate/uridylate kinase VM_03365 IPR005300 Lytic transglycosylase MltA, domain B VM_03365 IPR010611 3D domain VM_03365 IPR034654 MltA, 3D domain VM_03365 IPR026044 Membrane-bound lytic murein transglycosylase A VM_03365 IPR036908 RlpA-like domain superfamily VM_03370 IPR000594 THIF-type NAD/FAD binding fold VM_03370 IPR035985 Ubiquitin-activating enzyme VM_03375 IPR003808 Fe-S metabolism associated domain, SufE-like VM_03375 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE VM_03380 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VM_03380 IPR000192 Aminotransferase class V domain VM_03380 IPR015424 Pyridoxal phosphate-dependent transferase VM_03380 IPR016454 Cysteine desulfurase VM_03380 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA VM_03380 IPR010970 Cysteine desulfurase, SufS VM_03380 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VM_03385 IPR002818 DJ-1/PfpI VM_03385 IPR029062 Class I glutamine amidotransferase-like VM_03385 IPR006287 Protein/nucleic acid deglycase DJ-1 VM_03390 IPR003710 Ketopantoate reductase ApbA/PanE VM_03390 IPR013328 6-phosphogluconate dehydrogenase, domain 2 VM_03390 IPR036291 NAD(P)-binding domain superfamily VM_03390 IPR013332 Ketopantoate reductase, N-terminal domain VM_03390 IPR013752 Ketopantoate reductase, C-terminal domain VM_03390 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily VM_03395 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like VM_03395 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily VM_03405 IPR039425 RNA polymerase sigma-70 like VM_03405 IPR014284 RNA polymerase sigma-70 like domain VM_03405 IPR007630 RNA polymerase sigma-70 region 4 VM_03405 IPR013325 RNA polymerase sigma factor, region 2 VM_03405 IPR013324 RNA polymerase sigma factor, region 3/4-like VM_03405 IPR036388 Winged helix-like DNA-binding domain superfamily VM_03405 IPR007627 RNA polymerase sigma-70 region 2 VM_03415 IPR036259 MFS transporter superfamily VM_03415 IPR011701 Major facilitator superfamily VM_03415 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 VM_03415 IPR020846 Major facilitator superfamily domain VM_03420 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain VM_03420 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site VM_03420 IPR029000 Cyclophilin-like domain superfamily VM_03430 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VM_03430 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD VM_03430 IPR002052 DNA methylase, N-6 adenine-specific, conserved site VM_03430 IPR007848 Methyltransferase small domain VM_03435 IPR002634 BolA protein VM_03435 IPR036065 BolA-like superfamily VM_03440 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A VM_03440 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain VM_03445 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD VM_03445 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B VM_03450 IPR007329 FMN-binding VM_03450 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C VM_03455 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D VM_03455 IPR003667 NqrDE/RnfAE VM_03460 IPR003667 NqrDE/RnfAE VM_03460 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E VM_03465 IPR017927 FAD-binding domain, ferredoxin reductase-type VM_03465 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VM_03465 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain VM_03465 IPR012675 Beta-grasp domain superfamily VM_03465 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain VM_03465 IPR036010 2Fe-2S ferredoxin-like superfamily VM_03465 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F VM_03465 IPR017938 Riboflavin synthase-like beta-barrel VM_03465 IPR001433 Oxidoreductase FAD/NAD(P)-binding VM_03475 IPR042159 Flavin-trafficking protein ApbE VM_03475 IPR024932 Flavin transferase ApbE VM_03475 IPR003374 ApbE-like superfamily VM_03485 IPR022880 DNA polymerase IV VM_03485 IPR024728 DNA polymerase type-Y, HhH motif VM_03485 IPR036775 DNA polymerase, Y-family, little finger domain superfamily VM_03485 IPR001126 UmuC domain VM_03500 IPR037272 Sodium:neurotransmitter symporter superfamily VM_03500 IPR000175 Sodium:neurotransmitter symporter VM_03510 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK VM_03510 IPR041107 RimK, PreATP-grasp domain VM_03510 IPR013815 ATP-grasp fold, subdomain 1 VM_03510 IPR013651 ATP-grasp fold, RimK-type VM_03510 IPR011761 ATP-grasp fold VM_03510 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX VM_03515 IPR013651 ATP-grasp fold, RimK-type VM_03515 IPR013815 ATP-grasp fold, subdomain 1 VM_03515 IPR021109 Aspartic peptidase domain superfamily VM_03515 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK VM_03515 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX VM_03515 IPR041107 RimK, PreATP-grasp domain VM_03515 IPR011761 ATP-grasp fold VM_03520 IPR001160 Peptidase M20C, Xaa-His dipeptidase VM_03520 IPR011650 Peptidase M20, dimerisation domain VM_03520 IPR002933 Peptidase M20 VM_03525 IPR026033 Azaguanine-like transporters VM_03525 IPR006043 Xanthine/uracil/vitamin C permease VM_03530 IPR000836 Phosphoribosyltransferase domain VM_03530 IPR029057 Phosphoribosyltransferase-like VM_03530 IPR023747 Xanthine-guanine phosphoribosyltransferase VM_03540 IPR038208 Sigma factor-binding protein Crl superfamily VM_03540 IPR009986 Sigma factor-binding transcriptional regulator Crl VM_03545 IPR036974 PUA domain superfamily VM_03545 IPR015947 PUA-like superfamily VM_03545 IPR019797 Glutamate 5-kinase, conserved site VM_03545 IPR036393 Acetylglutamate kinase-like superfamily VM_03545 IPR011529 Glutamate 5-kinase VM_03545 IPR001057 Glutamate/acetylglutamate kinase VM_03545 IPR041739 Glutamate-5-kinase domain VM_03545 IPR001048 Aspartate/glutamate/uridylate kinase VM_03545 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase VM_03545 IPR002478 PUA domain VM_03550 IPR015590 Aldehyde dehydrogenase domain VM_03550 IPR016161 Aldehyde/histidinol dehydrogenase VM_03550 IPR016163 Aldehyde dehydrogenase, C-terminal VM_03550 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site VM_03550 IPR000965 GPR domain VM_03550 IPR012134 Glutamate-5-semialdehyde dehydrogenase VM_03550 IPR016162 Aldehyde dehydrogenase, N-terminal VM_03555 IPR003796 Ribonucleotide reductase regulator NrdR-like VM_03555 IPR005144 ATP-cone domain VM_03560 IPR011549 Riboflavin-specific deaminase, C-terminal VM_03560 IPR002125 Cytidine and deoxycytidylate deaminase domain VM_03560 IPR024072 Dihydrofolate reductase-like domain superfamily VM_03560 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal VM_03560 IPR016192 APOBEC/CMP deaminase, zinc-binding VM_03560 IPR016193 Cytidine deaminase-like VM_03560 IPR004794 Riboflavin biosynthesis protein RibD VM_03565 IPR001783 Lumazine-binding protein VM_03565 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily VM_03565 IPR026017 Lumazine-binding domain VM_03565 IPR017938 Riboflavin synthase-like beta-barrel VM_03570 IPR036144 RibA-like superfamily VM_03570 IPR032677 GTP cyclohydrolase II VM_03570 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB VM_03570 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily VM_03575 IPR036467 Lumazine/riboflavin synthase superfamily VM_03575 IPR002180 Lumazine/riboflavin synthase VM_03575 IPR034964 Lumazine synthase VM_03580 IPR035926 NusB-like superfamily VM_03580 IPR011605 NusB antitermination factor VM_03580 IPR006027 NusB/RsmB/TIM44 VM_03585 IPR016188 PurM-like, N-terminal domain VM_03585 IPR010918 PurM-like, C-terminal domain VM_03585 IPR036921 PurM-like, N-terminal domain superfamily VM_03585 IPR006283 Thiamine-monophosphate kinase VM_03585 IPR036676 PurM-like, C-terminal domain superfamily VM_03590 IPR007686 YutG/PgpA domain VM_03590 IPR026037 Phosphatidylglycerophosphatase A VM_03590 IPR036681 PgpA-like superfamily VM_03595 IPR020911 Uncharacterised protein family UPF0325 VM_03600 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme VM_03600 IPR002934 Polymerase, nucleotidyl transferase domain VM_03600 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase VM_03600 IPR006674 HD domain VM_03600 IPR003607 HD/PDEase domain VM_03600 IPR002912 ACT domain VM_03605 IPR001714 Peptidase M24, methionine aminopeptidase VM_03605 IPR000994 Peptidase M24 VM_03605 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 VM_03605 IPR036005 Creatinase/aminopeptidase-like VM_03610 IPR001865 Ribosomal protein S2 VM_03610 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid VM_03610 IPR018130 Ribosomal protein S2, conserved site VM_03610 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily VM_03615 IPR009060 UBA-like superfamily VM_03615 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation VM_03615 IPR036402 Elongation factor Ts, dimerisation domain superfamily VM_03615 IPR001816 Translation elongation factor EFTs/EF1B VM_03615 IPR018101 Translation elongation factor Ts, conserved site VM_03620 IPR001048 Aspartate/glutamate/uridylate kinase VM_03620 IPR011817 Uridylate kinase VM_03620 IPR015963 Uridylate kinase, bacteria VM_03620 IPR036393 Acetylglutamate kinase-like superfamily VM_03625 IPR002661 Ribosome recycling factor VM_03625 IPR023584 Ribosome recycling factor domain VM_03625 IPR036191 RRF superfamily VM_03630 IPR001441 Decaprenyl diphosphate synthase-like VM_03630 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site VM_03630 IPR036424 Decaprenyl diphosphate synthase-like superfamily VM_03635 IPR000374 Phosphatidate cytidylyltransferase VM_03640 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase VM_03640 IPR036291 NAD(P)-binding domain superfamily VM_03640 IPR036169 DXP reductoisomerase, C-terminal domain superfamily VM_03640 IPR026877 DXP reductoisomerase C-terminal domain VM_03640 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal VM_03640 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal VM_03645 IPR001478 PDZ domain VM_03645 IPR041489 PDZ domain 6 VM_03645 IPR008915 Peptidase M50 VM_03645 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase VM_03645 IPR036034 PDZ superfamily VM_03650 IPR034746 POTRA domain VM_03650 IPR023707 Outer membrane protein assembly factor BamA VM_03650 IPR039910 Surface antigen D15-like VM_03650 IPR010827 POTRA domain, BamA/TamA-like VM_03650 IPR000184 Bacterial surface antigen (D15) VM_03655 IPR005632 Chaperone protein Skp VM_03655 IPR024930 Skp domain superfamily VM_03660 IPR011004 Trimeric LpxA-like superfamily VM_03660 IPR001451 Hexapeptide repeat VM_03660 IPR018357 Hexapeptide transferase, conserved site VM_03660 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD VM_03660 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region VM_03665 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ VM_03665 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ VM_03665 IPR029069 HotDog domain superfamily VM_03670 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase VM_03670 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily VM_03670 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal VM_03670 IPR011004 Trimeric LpxA-like superfamily VM_03670 IPR001451 Hexapeptide repeat VM_03670 IPR018357 Hexapeptide transferase, conserved site VM_03675 IPR003835 Glycosyl transferase, family 19 VM_03680 IPR022898 Ribonuclease HII VM_03680 IPR001352 Ribonuclease HII/HIII VM_03680 IPR024567 Ribonuclease HII/HIII domain VM_03680 IPR012337 Ribonuclease H-like superfamily VM_03680 IPR036397 Ribonuclease H superfamily VM_03685 IPR029460 DNA polymerase, helix-hairpin-helix motif VM_03685 IPR016195 Polymerase/histidinol phosphatase-like VM_03685 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain VM_03685 IPR003141 Polymerase/histidinol phosphatase, N-terminal VM_03685 IPR004013 PHP domain VM_03685 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type VM_03685 IPR004805 DNA polymerase III, alpha subunit VM_03685 IPR040982 DNA polymerase III alpha subunit finger domain VM_03685 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain VM_03690 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal VM_03690 IPR001095 Acetyl-CoA carboxylase, alpha subunit VM_03690 IPR029045 ClpP/crotonase-like domain superfamily VM_03695 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal VM_03695 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_03695 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal VM_03695 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain VM_03695 IPR012094 tRNA(Ile)-lysidine synthase VM_03695 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal VM_03700 IPR036909 Cytochrome c-like domain superfamily VM_03700 IPR009056 Cytochrome c-like domain VM_03700 IPR008168 Cytochrome c, class IC VM_03705 IPR011322 Nitrogen regulatory PII-like, alpha/beta VM_03705 IPR002332 Nitrogen regulatory protein P-II, urydylation site VM_03705 IPR017918 Nitrogen regulatory protein PII, conserved site VM_03705 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VM_03705 IPR002187 Nitrogen regulatory protein PII VM_03710 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VM_03710 IPR005135 Endonuclease/exonuclease/phosphatase VM_03710 IPR022958 Uncharacterised protein family UPF0294 VM_03715 IPR018392 LysM domain VM_03715 IPR036779 LysM domain superfamily VM_03715 IPR023346 Lysozyme-like domain superfamily VM_03715 IPR008258 Transglycosylase SLT domain 1 VM_03715 IPR000189 Prokaryotic transglycosylase, active site VM_03720 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VM_03720 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain VM_03720 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain VM_03720 IPR001279 Metallo-beta-lactamase VM_03720 IPR017782 Hydroxyacylglutathione hydrolase VM_03725 IPR026669 Arsenite methyltransferase-like VM_03725 IPR013216 Methyltransferase type 11 VM_03725 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VM_03730 IPR036397 Ribonuclease H superfamily VM_03730 IPR022892 Ribonuclease HI VM_03730 IPR012337 Ribonuclease H-like superfamily VM_03730 IPR002156 Ribonuclease H domain VM_03735 IPR006309 DNA polymerase 3, epsilon subunit VM_03735 IPR036397 Ribonuclease H superfamily VM_03735 IPR012337 Ribonuclease H-like superfamily VM_03735 IPR013520 Exonuclease, RNase T/DNA polymerase III VM_03735 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain VM_03745 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type VM_03745 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily VM_03745 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal VM_03745 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal VM_03745 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily VM_03745 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal VM_03745 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain VM_03750 IPR004515 Phosphoheptose isomerase VM_03750 IPR001347 Sugar isomerase (SIS) VM_03750 IPR035461 GmhA/DiaA VM_03755 IPR029055 Nucleophile aminohydrolases, N-terminal VM_03755 IPR026869 Putative glutamine amidotransferase type 2 VM_03755 IPR017932 Glutamine amidotransferase type 2 domain VM_03760 IPR001555 Phosphoribosylglycinamide formyltransferase, active site VM_03760 IPR004607 Phosphoribosylglycinamide formyltransferase VM_03760 IPR036477 Formyl transferase, N-terminal domain superfamily VM_03760 IPR002376 Formyl transferase, N-terminal VM_03765 IPR016188 PurM-like, N-terminal domain VM_03765 IPR036921 PurM-like, N-terminal domain superfamily VM_03765 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase VM_03765 IPR010918 PurM-like, C-terminal domain VM_03765 IPR036676 PurM-like, C-terminal domain superfamily VM_03770 IPR005765 Uracil phosphoribosyl transferase VM_03770 IPR000836 Phosphoribosyltransferase domain VM_03770 IPR029057 Phosphoribosyltransferase-like VM_03770 IPR034332 Uracil phosphoribosyltransferase, bacterial-type VM_03775 IPR020103 Pseudouridine synthase, catalytic domain superfamily VM_03775 IPR006145 Pseudouridine synthase, RsuA/RluA VM_03775 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain VM_03775 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site VM_03775 IPR002942 RNA-binding S4 domain VM_03775 IPR036986 RNA-binding S4 domain superfamily VM_03775 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F VM_03780 IPR002625 Smr domain VM_03780 IPR036063 Smr domain superfamily VM_03800 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain VM_03800 IPR012291 CBM2, carbohydrate-binding domain superfamily VM_03800 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily VM_03800 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal VM_03800 IPR029018 Beta-hexosaminidase-like, domain 2 VM_03800 IPR015883 Glycoside hydrolase family 20, catalytic domain VM_03800 IPR013783 Immunoglobulin-like fold VM_03800 IPR014756 Immunoglobulin E-set VM_03800 IPR017853 Glycoside hydrolase superfamily VM_03800 IPR004867 Chitobiase C-terminal domain VM_03800 IPR025705 Beta-hexosaminidase VM_03810 IPR023214 HAD superfamily VM_03810 IPR008250 P-type ATPase, A domain superfamily VM_03810 IPR036412 HAD-like superfamily VM_03810 IPR017969 Heavy-metal-associated, conserved site VM_03810 IPR023298 P-type ATPase, transmembrane domain superfamily VM_03810 IPR023299 P-type ATPase, cytoplasmic domain N VM_03810 IPR006121 Heavy metal-associated domain, HMA VM_03810 IPR036163 Heavy metal-associated domain superfamily VM_03810 IPR027256 P-type ATPase, subfamily IB VM_03810 IPR001757 P-type ATPase VM_03810 IPR018303 P-type ATPase, phosphorylation site VM_03815 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_03815 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site VM_03815 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 VM_03815 IPR033910 Glutamyl-tRNA synthetase VM_03815 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain VM_03815 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial VM_03815 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding VM_03815 IPR000924 Glutamyl/glutaminyl-tRNA synthetase VM_03820 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VM_03820 IPR036737 OmpA-like domain superfamily VM_03820 IPR000498 Outer membrane protein OmpA-like, transmembrane domain VM_03820 IPR002368 Outer membrane protein, OmpA VM_03820 IPR006665 OmpA-like domain VM_03820 IPR006690 Outer membrane protein, OmpA-like, conserved site VM_03820 IPR006664 Outer membrane protein, bacterial VM_03865 IPR024181 Chemotaxis response regulator CheV VM_03865 IPR002545 CheW-like domain VM_03865 IPR011006 CheY-like superfamily VM_03865 IPR036061 CheW-like domain superfamily VM_03865 IPR001789 Signal transduction response regulator, receiver domain VM_03870 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal VM_03870 IPR000780 MCP methyltransferase, CheR-type VM_03870 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal VM_03870 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily VM_03870 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VM_03875 IPR006300 Flagellar basal-body rod protein FlgB VM_03875 IPR001444 Flagellar basal body rod protein, N-terminal VM_03875 IPR019776 Flagellar basal body rod protein, conserved site VM_03880 IPR006299 Flagellar basal-body rod protein FlgC VM_03880 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VM_03880 IPR019776 Flagellar basal body rod protein, conserved site VM_03880 IPR001444 Flagellar basal body rod protein, N-terminal VM_03885 IPR025963 FlgD Tudor-like domain VM_03885 IPR005648 Flagellar hook capping protein VM_03885 IPR025965 FlgD Ig-like domain VM_03890 IPR020013 Flagellar hook-basal body protein, FlgE/F/G VM_03890 IPR019776 Flagellar basal body rod protein, conserved site VM_03890 IPR001444 Flagellar basal body rod protein, N-terminal VM_03890 IPR037058 Flagellar hook protein FlgE superfamily VM_03890 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like VM_03890 IPR011491 Flagellar hook protein FlgE VM_03890 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VM_03895 IPR019776 Flagellar basal body rod protein, conserved site VM_03895 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VM_03895 IPR020013 Flagellar hook-basal body protein, FlgE/F/G VM_03895 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like VM_03895 IPR001444 Flagellar basal body rod protein, N-terminal VM_03900 IPR012834 Flagellar basal-body rod FlgG VM_03900 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like VM_03900 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VM_03900 IPR020013 Flagellar hook-basal body protein, FlgE/F/G VM_03900 IPR001444 Flagellar basal body rod protein, N-terminal VM_03900 IPR019776 Flagellar basal body rod protein, conserved site VM_03905 IPR000527 Flagellar L-ring protein VM_03910 IPR001782 Flagellar P-ring protein VM_03915 IPR013377 Peptidoglycan hydrolase FlgJ VM_03915 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain VM_03915 IPR019301 Flagellar protein FlgJ, N-terminal VM_03920 IPR010810 Flagellin hook, IN motif VM_03920 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VM_03920 IPR002371 Flagellar hook-associated protein 1 VM_03930 IPR001029 Flagellin, D0/D1 domain VM_03930 IPR001492 Flagellin VM_03930 IPR042187 Flagellin, C-terminal domain, subdomain 2 VM_03930 IPR010810 Flagellin hook, IN motif VM_03935 IPR010810 Flagellin hook, IN motif VM_03935 IPR001029 Flagellin, D0/D1 domain VM_03935 IPR042187 Flagellin, C-terminal domain, subdomain 2 VM_03935 IPR001492 Flagellin VM_04020 IPR041706 YchF, N-terminal VM_04020 IPR013029 YchF, C-terminal domain VM_04020 IPR023192 TGS-like domain superfamily VM_04020 IPR012676 TGS-like VM_04020 IPR004095 TGS VM_04020 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_04020 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 VM_04020 IPR031167 OBG-type guanine nucleotide-binding (G) domain VM_04020 IPR012675 Beta-grasp domain superfamily VM_04020 IPR006073 GTP binding domain VM_04025 IPR036416 Peptidyl-tRNA hydrolase superfamily VM_04025 IPR001328 Peptidyl-tRNA hydrolase VM_04025 IPR018171 Peptidyl-tRNA hydrolase, conserved site VM_04030 IPR005946 Ribose-phosphate pyrophosphokinase VM_04030 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type VM_04030 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site VM_04030 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain VM_04030 IPR000836 Phosphoribosyltransferase domain VM_04030 IPR029057 Phosphoribosyltransferase-like VM_04035 IPR013750 GHMP kinase, C-terminal domain VM_04035 IPR036554 GHMP kinase, C-terminal domain superfamily VM_04035 IPR006204 GHMP kinase N-terminal domain VM_04035 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase VM_04035 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VM_04035 IPR020568 Ribosomal protein S5 domain 2-type fold VM_04040 IPR004565 Outer membrane lipoprotein LolB VM_04040 IPR029046 Lipoprotein localisation LolA/LolB/LppX VM_04045 IPR036291 NAD(P)-binding domain superfamily VM_04045 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily VM_04045 IPR018214 Glutamyl-tRNA reductase, conserved site VM_04045 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal VM_04045 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase VM_04045 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain VM_04045 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase VM_04045 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily VM_04050 IPR005139 Peptide chain release factor VM_04050 IPR000352 Peptide chain release factor class I VM_04050 IPR004373 Peptide chain release factor 1 VM_04055 IPR002052 DNA methylase, N-6 adenine-specific, conserved site VM_04055 IPR004556 Methyltransferase HemK-like VM_04055 IPR025714 Methyltransferase domain VM_04055 IPR040758 Release factor glutamine methyltransferase, N-terminal domain VM_04055 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VM_04055 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific VM_04060 IPR007360 Invasion gene expression up-regulator, SirB VM_04065 IPR011990 Tetratricopeptide-like helical domain superfamily VM_04065 IPR032698 Protein SirB1, N-terminal VM_04070 IPR013785 Aldolase-type TIM barrel VM_04070 IPR006218 DAHP synthetase I/KDSA VM_04070 IPR006269 3-deoxy-8-phosphooctulonate synthase VM_04075 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type VM_04075 IPR006179 5'-Nucleotidase/apyrase VM_04075 IPR006146 5'-Nucleotidase, conserved site VM_04075 IPR036907 5'-Nucleotidase, C-terminal domain superfamily VM_04075 IPR008334 5'-Nucleotidase, C-terminal VM_04075 IPR029052 Metallo-dependent phosphatase-like VM_04080 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC VM_04080 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily VM_04080 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain VM_04085 IPR029935 Uracil permease VM_04085 IPR006043 Xanthine/uracil/vitamin C permease VM_04085 IPR006042 Xanthine/uracil permease VM_04100 IPR001226 Flavodoxin, conserved site VM_04100 IPR010089 Flavoprotein WrbA-like VM_04100 IPR005025 NADPH-dependent FMN reductase-like VM_04100 IPR029039 Flavoprotein-like superfamily VM_04100 IPR008254 Flavodoxin/nitric oxide synthase VM_04105 IPR006659 Arsenate reductase VM_04105 IPR006660 Arsenate reductase-like VM_04105 IPR036249 Thioredoxin-like superfamily VM_04110 IPR019734 Tetratricopeptide repeat VM_04110 IPR011990 Tetratricopeptide-like helical domain superfamily VM_04110 IPR013026 Tetratricopeptide repeat-containing domain VM_04110 IPR030873 Beta-barrel assembly-enhancing protease VM_04110 IPR001915 Peptidase M48 VM_04120 IPR002549 Transmembrane protein TqsA-like VM_04125 IPR004090 Chemotaxis methyl-accepting receptor VM_04125 IPR029151 Periplasmic sensor-like domain superfamily VM_04125 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_04125 IPR000727 Target SNARE coiled-coil homology domain VM_04125 IPR003660 HAMP domain VM_04125 IPR033479 Double Cache domain 1 VM_04150 IPR036249 Thioredoxin-like superfamily VM_04150 IPR013766 Thioredoxin domain VM_04150 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant VM_04185 IPR020624 Schiff base-forming aldolase, conserved site VM_04185 IPR020625 Schiff base-forming aldolase, active site VM_04185 IPR002220 DapA-like VM_04185 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA VM_04185 IPR013785 Aldolase-type TIM barrel VM_04190 IPR010653 NlpB/DapX lipoprotein VM_04190 IPR042268 Outer membrane protein assembly factor BamC, C-terminal VM_04190 IPR014524 Outer membrane protein assembly factor BamC VM_04200 IPR003709 Peptidase M15B VM_04200 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily VM_04205 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site VM_04205 IPR011650 Peptidase M20, dimerisation domain VM_04205 IPR002933 Peptidase M20 VM_04205 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria VM_04205 IPR036264 Bacterial exopeptidase dimerisation domain VM_04210 IPR006660 Arsenate reductase-like VM_04210 IPR036249 Thioredoxin-like superfamily VM_04210 IPR006504 Transcriptional regulator Spx/MgsR VM_04225 IPR021318 Protein of unknown function DUF2919 VM_04230 IPR011008 Dimeric alpha-beta barrel VM_04230 IPR006314 Dyp-type peroxidase VM_04235 IPR001492 Flagellin VM_04235 IPR042187 Flagellin, C-terminal domain, subdomain 2 VM_04235 IPR010810 Flagellin hook, IN motif VM_04235 IPR001029 Flagellin, D0/D1 domain VM_04240 IPR001492 Flagellin VM_04240 IPR042187 Flagellin, C-terminal domain, subdomain 2 VM_04240 IPR001029 Flagellin, D0/D1 domain VM_04240 IPR010810 Flagellin hook, IN motif VM_04245 IPR010810 Flagellin hook, IN motif VM_04245 IPR001029 Flagellin, D0/D1 domain VM_04245 IPR042187 Flagellin, C-terminal domain, subdomain 2 VM_04245 IPR001492 Flagellin VM_04250 IPR005186 FlaG protein VM_04250 IPR035924 FlaG-like superfamily VM_04255 IPR010809 Flagellar hook-associated protein 2, C-terminal VM_04255 IPR040026 Flagellar hook-associated protein 2 VM_04255 IPR010810 Flagellin hook, IN motif VM_04255 IPR003481 Flagellar hook-associated protein 2, N-terminal VM_04265 IPR003713 Flagellar protein FliS VM_04265 IPR036584 Flagellar protein FliS superfamily VM_04270 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VM_04270 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VM_04270 IPR002078 RNA polymerase sigma factor 54 interaction domain VM_04270 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_04270 IPR002197 DNA binding HTH domain, Fis-type VM_04270 IPR009057 Homeobox-like domain superfamily VM_04270 IPR011006 CheY-like superfamily VM_04270 IPR003593 AAA+ ATPase domain VM_04270 IPR010114 DNA-binding transcriptional regulator NtrC VM_04270 IPR001789 Signal transduction response regulator, receiver domain VM_04270 IPR025944 Sigma-54 interaction domain, conserved site VM_04275 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_04275 IPR029151 Periplasmic sensor-like domain superfamily VM_04275 IPR003594 Histidine kinase/HSP90-like ATPase VM_04275 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VM_04275 IPR005467 Histidine kinase domain VM_04275 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VM_04275 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VM_04280 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VM_04280 IPR001789 Signal transduction response regulator, receiver domain VM_04280 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_04280 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VM_04280 IPR009057 Homeobox-like domain superfamily VM_04280 IPR002197 DNA binding HTH domain, Fis-type VM_04280 IPR003593 AAA+ ATPase domain VM_04280 IPR025944 Sigma-54 interaction domain, conserved site VM_04280 IPR011006 CheY-like superfamily VM_04280 IPR002078 RNA polymerase sigma factor 54 interaction domain VM_04285 IPR001624 Flagellar hook-basal body complex protein FliE VM_04290 IPR006182 Secretory protein YscJ/FliF VM_04290 IPR000067 Flagellar M-ring protein FliF VM_04290 IPR013556 Flagellar M-ring C-terminal VM_04295 IPR000090 Flagellar motor switch protein FliG VM_04295 IPR023087 Flagellar motor switch protein FliG, C-terminal VM_04295 IPR011002 Flagellar motor switch protein FliG, alpha-helical VM_04295 IPR032779 Flagellar motor switch protein FliG, middle domain VM_04295 IPR028263 Flagellar motor switch protein FliG, N-terminal domain VM_04300 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE VM_04305 IPR032463 ATPase, type III secretion system, FliI VM_04305 IPR005714 ATPase, type III secretion system, FliI/YscN VM_04305 IPR040627 T3SS EscN ATPase, C-terminal VM_04305 IPR020005 Flagellar export ATPase FliI, clade 1 VM_04305 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_04305 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain VM_04305 IPR003593 AAA+ ATPase domain VM_04305 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site VM_04325 IPR036429 SpoA-like superfamily VM_04325 IPR028976 CheC-like superfamily VM_04325 IPR001689 Flagellar motor switch protein FliM VM_04325 IPR001543 Surface presentation of antigen (SpoA) VM_04330 IPR012826 Flagellar motor switch FliN VM_04330 IPR036429 SpoA-like superfamily VM_04330 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb VM_04330 IPR001543 Surface presentation of antigen (SpoA) VM_04335 IPR022781 Flagellar biosynthesis protein, FliO VM_04340 IPR005837 Flagellar transport protein FliP VM_04340 IPR005838 Type III secretion system inner membrane P protein VM_04345 IPR002191 Bacterial export protein family 3 VM_04345 IPR006305 Flagellar biosynthesis protein FliQ VM_04350 IPR002010 Type III secretion system inner membrane R protein VM_04350 IPR006303 Flagellar biosynthesis protein FliR VM_04355 IPR006136 Flagellar biosynthetic protein FlhB VM_04355 IPR029025 Type III secretion system substrate exporter, C-terminal VM_04355 IPR006135 Type III secretion system substrate exporter VM_04360 IPR002625 Smr domain VM_04360 IPR036063 Smr domain superfamily VM_04360 IPR022990 Uncharacterised protein family UPF0115 VM_04365 IPR007848 Methyltransferase small domain VM_04365 IPR002052 DNA methylase, N-6 adenine-specific, conserved site VM_04365 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase VM_04365 IPR004556 Methyltransferase HemK-like VM_04365 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VM_04375 IPR035904 Chorismate synthase AroC superfamily VM_04375 IPR000453 Chorismate synthase VM_04375 IPR020541 Chorismate synthase, conserved site VM_04380 IPR005115 Uncharacterised domain UPF0126 VM_04385 IPR007411 Elongation factor P hydroxylase VM_04390 IPR014987 Uncharacterised protein family YfcL VM_04395 IPR005025 NADPH-dependent FMN reductase-like VM_04395 IPR029039 Flavoprotein-like superfamily VM_04400 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal VM_04400 IPR008471 MnmC-like methyltransferase VM_04400 IPR036188 FAD/NAD(P)-binding domain superfamily VM_04400 IPR006076 FAD dependent oxidoreductase VM_04400 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC VM_04405 IPR014030 Beta-ketoacyl synthase, N-terminal VM_04405 IPR016039 Thiolase-like VM_04405 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VM_04405 IPR000794 Beta-ketoacyl synthase VM_04405 IPR014031 Beta-ketoacyl synthase, C-terminal VM_04405 IPR018201 Beta-ketoacyl synthase, active site VM_04410 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain VM_04410 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VM_04410 IPR038251 PdxB, dimerisation domain superfamily VM_04410 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VM_04410 IPR020921 Erythronate-4-phosphate dehydrogenase VM_04410 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain VM_04410 IPR036291 NAD(P)-binding domain superfamily VM_04415 IPR012280 Semialdehyde dehydrogenase, dimerisation domain VM_04415 IPR012080 Aspartate-semialdehyde dehydrogenase VM_04415 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type VM_04415 IPR036291 NAD(P)-binding domain superfamily VM_04415 IPR000534 Semialdehyde dehydrogenase, NAD-binding VM_04415 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site VM_04420 IPR012337 Ribonuclease H-like superfamily VM_04420 IPR014736 Transposase, Tn5-like, core VM_04420 IPR014737 Transposase, Tn5-like, C-terminal VM_04420 IPR002559 Transposase, IS4-like VM_04420 IPR003201 Transposase Tn5, dimerisation VM_04420 IPR038215 Transposase, Tn5-like, N-terminal domain superfamily VM_04420 IPR014735 Transposase, Tn5-like, N-terminal VM_04425 IPR036390 Winged helix DNA-binding domain superfamily VM_04425 IPR002481 Ferric-uptake regulator VM_04425 IPR036388 Winged helix-like DNA-binding domain superfamily VM_04435 IPR036388 Winged helix-like DNA-binding domain superfamily VM_04435 IPR005119 LysR, substrate-binding VM_04435 IPR000847 Transcription regulator HTH, LysR VM_04435 IPR036390 Winged helix DNA-binding domain superfamily VM_04440 IPR023760 Holin-like protein CidA VM_04440 IPR005538 LrgA/CidA family VM_04445 IPR005261 Conserved hypothetical protein CHP00659 VM_04445 IPR007300 CidB/LrgB family VM_04450 IPR029039 Flavoprotein-like superfamily VM_04450 IPR008254 Flavodoxin/nitric oxide synthase VM_04450 IPR001226 Flavodoxin, conserved site VM_04450 IPR010086 Flavodoxin, long chain VM_04460 IPR000073 Alpha/beta hydrolase fold-1 VM_04460 IPR029058 Alpha/Beta hydrolase fold VM_04465 IPR005621 Negative modulator of initiation of replication SeqA VM_04465 IPR010985 Ribbon-helix-helix VM_04465 IPR013321 Arc-type ribbon-helix-helix VM_04465 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily VM_04465 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal VM_04465 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain VM_04470 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III VM_04470 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I VM_04470 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily VM_04470 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III VM_04470 IPR005843 Alpha-D-phosphohexomutase, C-terminal VM_04470 IPR016066 Alpha-D-phosphohexomutase, conserved site VM_04470 IPR005852 Phosphoglucomutase, alpha-D-glucose specific VM_04470 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II VM_04480 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 VM_04480 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily VM_04485 IPR002020 Citrate synthase VM_04485 IPR019810 Citrate synthase active site VM_04485 IPR024176 Citrate synthase, bacterial-type VM_04485 IPR036969 Citrate synthase superfamily VM_04485 IPR010953 Citrate synthase, type I VM_04485 IPR016143 Citrate synthase-like, small alpha subdomain VM_04485 IPR016142 Citrate synthase-like, large alpha subdomain VM_04490 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit VM_04490 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site VM_04490 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit VM_04490 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit VM_04495 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor VM_04495 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit VM_04495 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit VM_04500 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain VM_04500 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site VM_04500 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal VM_04500 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily VM_04500 IPR011281 Succinate dehydrogenase, flavoprotein subunit VM_04500 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit VM_04500 IPR036188 FAD/NAD(P)-binding domain superfamily VM_04500 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily VM_04505 IPR036010 2Fe-2S ferredoxin-like superfamily VM_04505 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal VM_04505 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein VM_04505 IPR009051 Alpha-helical ferredoxin VM_04505 IPR012675 Beta-grasp domain superfamily VM_04505 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VM_04505 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VM_04505 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain VM_04510 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain VM_04510 IPR011603 2-oxoglutarate dehydrogenase E1 component VM_04510 IPR001017 Dehydrogenase, E1 component VM_04510 IPR005475 Transketolase-like, pyrimidine-binding domain VM_04510 IPR029061 Thiamin diphosphate-binding fold VM_04510 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily VM_04510 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal VM_04515 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily VM_04515 IPR004167 Peripheral subunit-binding domain VM_04515 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain VM_04515 IPR006255 Dihydrolipoamide succinyltransferase VM_04515 IPR011053 Single hybrid motif VM_04515 IPR000089 Biotin/lipoyl attachment VM_04515 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site VM_04515 IPR036625 E3-binding domain superfamily VM_04520 IPR013815 ATP-grasp fold, subdomain 1 VM_04520 IPR005811 ATP-citrate lyase/succinyl-CoA ligase VM_04520 IPR011761 ATP-grasp fold VM_04520 IPR016102 Succinyl-CoA synthetase-like VM_04520 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type VM_04520 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site VM_04520 IPR005809 Succinate--CoA synthetase, beta subunit VM_04525 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site VM_04525 IPR005810 Succinyl-CoA ligase, alpha subunit VM_04525 IPR016102 Succinyl-CoA synthetase-like VM_04525 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site VM_04525 IPR005811 ATP-citrate lyase/succinyl-CoA ligase VM_04525 IPR003781 CoA-binding VM_04525 IPR036291 NAD(P)-binding domain superfamily VM_04530 IPR037294 ABC transporter, BtuC-like VM_04530 IPR001626 ABC transporter, TroCD-like VM_04535 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_04535 IPR017882 Zinc import ATP-binding protein ZnuC VM_04535 IPR003439 ABC transporter-like VM_04535 IPR003593 AAA+ ATPase domain VM_04540 IPR006127 Periplasmic solute binding protein, ZnuA-like VM_04540 IPR035520 High-affinity zinc uptake system protein ZnuA VM_04545 IPR011051 RmlC-like cupin domain superfamily VM_04545 IPR009057 Homeobox-like domain superfamily VM_04545 IPR014710 RmlC-like jelly roll fold VM_04545 IPR023609 Transcription regulator HTH, RhaS VM_04545 IPR018060 DNA binding HTH domain, AraC-type VM_04545 IPR003313 AraC-type arabinose-binding/dimerisation domain VM_04545 IPR020449 Transcription regulator HTH, AraC- type VM_04550 IPR038157 Ferrous iron transporter, core domain VM_04550 IPR008988 Transcriptional repressor, C-terminal VM_04550 IPR007167 Ferrous iron transporter FeoA domain VM_04555 IPR011640 Ferrous iron transport protein B, C-terminal VM_04555 IPR003373 Ferrous iron transport protein B VM_04555 IPR030389 FeoB-type guanine nucleotide-binding (G) domain VM_04555 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_04555 IPR006073 GTP binding domain VM_04555 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain VM_04565 IPR014735 Transposase, Tn5-like, N-terminal VM_04565 IPR038215 Transposase, Tn5-like, N-terminal domain superfamily VM_04565 IPR002559 Transposase, IS4-like VM_04565 IPR003201 Transposase Tn5, dimerisation VM_04565 IPR014737 Transposase, Tn5-like, C-terminal VM_04565 IPR014736 Transposase, Tn5-like, core VM_04565 IPR012337 Ribonuclease H-like superfamily VM_04575 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_04575 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding VM_04575 IPR008909 DALR anticodon binding VM_04575 IPR035684 Arginyl-tRNA synthetase, catalytic core domain VM_04575 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site VM_04575 IPR005148 Arginyl tRNA synthetase N-terminal domain VM_04575 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily VM_04575 IPR001278 Arginine-tRNA ligase VM_04585 IPR011844 Coenzyme PQQ biosynthesis protein PqqF VM_04585 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like VM_04585 IPR011765 Peptidase M16, N-terminal VM_04585 IPR001431 Peptidase M16, zinc-binding site VM_04585 IPR007863 Peptidase M16, C-terminal VM_04590 IPR004449 Phosphohistidine phosphatase SixA VM_04590 IPR029033 Histidine phosphatase superfamily VM_04590 IPR013078 Histidine phosphatase superfamily, clade-1 VM_04595 IPR006301 Flagellar biosynthesis protein FlhA VM_04595 IPR042194 FHIPEP, domain 1 VM_04595 IPR001712 Type III secretion system FHIPEP VM_04595 IPR042193 FHIPEP, domain 3 VM_04595 IPR042196 FHIPEP, domain 4 VM_04595 IPR025505 FHIPEP conserved site VM_04600 IPR003593 AAA+ ATPase domain VM_04600 IPR020006 Flagellar biosynthesis protein FlhF VM_04600 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_04600 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain VM_04605 IPR025501 ATP binding protein MinD VM_04605 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 VM_04605 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_04610 IPR007627 RNA polymerase sigma-70 region 2 VM_04610 IPR007624 RNA polymerase sigma-70 region 3 VM_04610 IPR013325 RNA polymerase sigma factor, region 2 VM_04610 IPR007630 RNA polymerase sigma-70 region 4 VM_04610 IPR028617 RNA polymerase sigma factor FliA VM_04610 IPR013324 RNA polymerase sigma factor, region 3/4-like VM_04610 IPR000943 RNA polymerase sigma-70 VM_04610 IPR014284 RNA polymerase sigma-70 like domain VM_04610 IPR012845 RNA polymerase sigma factor, FliA/WhiG VM_04615 IPR011006 CheY-like superfamily VM_04615 IPR001789 Signal transduction response regulator, receiver domain VM_04620 IPR007439 Chemotaxis phosphatase, CheZ VM_04625 IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily VM_04625 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily VM_04625 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VM_04625 IPR003594 Histidine kinase/HSP90-like ATPase VM_04625 IPR036641 HPT domain superfamily VM_04625 IPR004105 Histidine kinase CheA-like, homodimeric domain VM_04625 IPR002545 CheW-like domain VM_04625 IPR035891 CheY-binding domain of CheA VM_04625 IPR005467 Histidine kinase domain VM_04625 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain VM_04625 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VM_04625 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_04625 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding VM_04625 IPR036061 CheW-like domain superfamily VM_04630 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type VM_04630 IPR035909 Methylesterase CheB, C-terminal VM_04630 IPR001789 Signal transduction response regulator, receiver domain VM_04630 IPR011006 CheY-like superfamily VM_04630 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase VM_04635 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_04635 IPR025669 AAA domain VM_04645 IPR039315 Chemotaxis protein CheW VM_04645 IPR036061 CheW-like domain superfamily VM_04645 IPR002545 CheW-like domain VM_04655 IPR003593 AAA+ ATPase domain VM_04655 IPR005895 ABC transporter, haem export, CcmA VM_04655 IPR003439 ABC transporter-like VM_04655 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_04655 IPR017871 ABC transporter, conserved site VM_04660 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria VM_04660 IPR003544 Cytochrome c-type biogenesis protein CcmB VM_04665 IPR002541 Cytochrome c assembly protein VM_04665 IPR003557 Cytochrome c-type biogenesis protein CcmC VM_04675 IPR036127 CcmE-like superfamily VM_04675 IPR004329 CcmE/CycJ protein VM_04680 IPR003567 Cytochrome c-type biogenesis protein VM_04680 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal VM_04680 IPR002541 Cytochrome c assembly protein VM_04680 IPR003568 Cytochrome c-type biogenesis protein CcmF VM_04685 IPR013740 Redoxin VM_04685 IPR036249 Thioredoxin-like superfamily VM_04685 IPR013766 Thioredoxin domain VM_04685 IPR017937 Thioredoxin, conserved site VM_04685 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE VM_04690 IPR019734 Tetratricopeptide repeat VM_04690 IPR011990 Tetratricopeptide-like helical domain superfamily VM_04690 IPR013026 Tetratricopeptide repeat-containing domain VM_04690 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily VM_04690 IPR005616 CcmH/CycL/Ccl2/NrfF family VM_04700 IPR007428 MlaA lipoprotein VM_04715 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily VM_04715 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily VM_04715 IPR001189 Manganese/iron superoxide dismutase VM_04715 IPR019833 Manganese/iron superoxide dismutase, binding site VM_04715 IPR019831 Manganese/iron superoxide dismutase, N-terminal VM_04715 IPR019832 Manganese/iron superoxide dismutase, C-terminal VM_04720 IPR036249 Thioredoxin-like superfamily VM_04720 IPR004480 Monothiol glutaredoxin-related VM_04720 IPR014434 Monothiol glutaredoxin VM_04720 IPR033658 Glutaredoxin, PICOT-like VM_04720 IPR002109 Glutaredoxin VM_04725 IPR003601 DNA topoisomerase, type IA, domain 2 VM_04725 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 VM_04725 IPR005738 DNA topoisomerase III VM_04725 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 VM_04725 IPR006171 TOPRIM domain VM_04725 IPR023406 DNA topoisomerase, type IA, active site VM_04725 IPR013497 DNA topoisomerase, type IA, central VM_04725 IPR023405 DNA topoisomerase, type IA, core domain VM_04725 IPR003602 DNA topoisomerase, type IA, DNA-binding domain VM_04725 IPR034144 DNA topoisomerase 3-like, TOPRIM domain VM_04725 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 VM_04725 IPR000380 DNA topoisomerase, type IA VM_04730 IPR023801 Histone deacetylase domain VM_04730 IPR000286 Histone deacetylase family VM_04730 IPR023696 Ureohydrolase domain superfamily VM_04730 IPR037138 Histone deacetylase domain superfamily VM_04745 IPR020904 Short-chain dehydrogenase/reductase, conserved site VM_04745 IPR036291 NAD(P)-binding domain superfamily VM_04745 IPR002347 Short-chain dehydrogenase/reductase SDR VM_04765 IPR024588 Inner membrane protein YejM, N-terminal VM_04765 IPR012159 Inner membrane protein YejM VM_04765 IPR017850 Alkaline-phosphatase-like, core domain superfamily VM_04765 IPR000917 Sulfatase, N-terminal VM_04770 IPR009857 Uncharacterised protein family UPF0352 VM_04770 IPR023202 YejL-like superfamily VM_04775 IPR007358 Nucleoid-associated protein NdpA VM_04785 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal VM_04785 IPR004770 Na+/H+ antiporter NhaC VM_04790 IPR036291 NAD(P)-binding domain superfamily VM_04790 IPR012080 Aspartate-semialdehyde dehydrogenase VM_04790 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site VM_04790 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type VM_04790 IPR012280 Semialdehyde dehydrogenase, dimerisation domain VM_04790 IPR000534 Semialdehyde dehydrogenase, NAD-binding VM_04795 IPR018490 Cyclic nucleotide-binding-like VM_04795 IPR018488 Cyclic nucleotide-binding, conserved site VM_04795 IPR014710 RmlC-like jelly roll fold VM_04795 IPR005821 Ion transport domain VM_04795 IPR028325 Voltage-gated potassium channel VM_04795 IPR000595 Cyclic nucleotide-binding domain VM_04800 IPR002771 Multiple antibiotic resistance (MarC)-related VM_04805 IPR016163 Aldehyde dehydrogenase, C-terminal VM_04805 IPR016161 Aldehyde/histidinol dehydrogenase VM_04805 IPR015590 Aldehyde dehydrogenase domain VM_04805 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase VM_04805 IPR039697 Iron-type alcohol dehydrogenase-like VM_04805 IPR018211 Alcohol dehydrogenase, iron-type, conserved site VM_04805 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA VM_04805 IPR034789 Bifunctional aldehyde-alcohol dehydrogenase, C-terminal domain VM_04805 IPR016162 Aldehyde dehydrogenase, N-terminal VM_04815 IPR036513 STAS domain superfamily VM_04815 IPR018045 Sulphate anion transporter, conserved site VM_04815 IPR011547 SLC26A/SulP transporter domain VM_04815 IPR001902 SLC26A/SulP transporter VM_04815 IPR002645 STAS domain VM_04820 IPR021968 Polyribonucleotide phosphorylase C-terminal VM_04820 IPR003029 S1 domain VM_04820 IPR004659 Ribonuclease E/G VM_04820 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G VM_04820 IPR022967 RNA-binding domain, S1 VM_04820 IPR012340 Nucleic acid-binding, OB-fold VM_04820 IPR028878 Ribonuclease E VM_04830 IPR006225 Pseudouridine synthase, RluC/RluD VM_04830 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site VM_04830 IPR006145 Pseudouridine synthase, RsuA/RluA VM_04830 IPR002942 RNA-binding S4 domain VM_04830 IPR036986 RNA-binding S4 domain superfamily VM_04830 IPR020103 Pseudouridine synthase, catalytic domain superfamily VM_04835 IPR029001 Inosine triphosphate pyrophosphatase-like VM_04835 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein VM_04840 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria VM_04840 IPR003772 Large ribosomal RNA subunit accumulation protein YceD VM_04845 IPR002677 Ribosomal protein L32p VM_04845 IPR011332 Zinc-binding ribosomal protein VM_04850 IPR012281 Phospholipid biosynthesis protein, PlsX-like VM_04850 IPR003664 Fatty acid synthesis PlsX protein VM_04855 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 VM_04855 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal VM_04855 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VM_04855 IPR016039 Thiolase-like VM_04860 IPR001227 Acyl transferase domain superfamily VM_04860 IPR014043 Acyl transferase VM_04860 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VM_04860 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding VM_04860 IPR024925 Malonyl CoA-acyl carrier protein transacylase VM_04860 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type VM_04865 IPR002347 Short-chain dehydrogenase/reductase SDR VM_04865 IPR036291 NAD(P)-binding domain superfamily VM_04865 IPR020904 Short-chain dehydrogenase/reductase, conserved site VM_04865 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase VM_04870 IPR006162 Phosphopantetheine attachment site VM_04870 IPR009081 Phosphopantetheine binding ACP domain VM_04870 IPR003231 Acyl carrier protein (ACP) VM_04870 IPR036736 ACP-like superfamily VM_04875 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VM_04875 IPR016039 Thiolase-like VM_04875 IPR014030 Beta-ketoacyl synthase, N-terminal VM_04875 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 VM_04875 IPR000794 Beta-ketoacyl synthase VM_04875 IPR018201 Beta-ketoacyl synthase, active site VM_04875 IPR014031 Beta-ketoacyl synthase, C-terminal VM_04880 IPR017824 Aminodeoxychorismate lyase, class IV VM_04880 IPR018300 Aminotransferase, class IV, conserved site VM_04880 IPR036038 Aminotransferase-like, PLP-dependent enzymes VM_04880 IPR001544 Aminotransferase class IV VM_04885 IPR003770 Endolytic murein transglycosylase VM_04890 IPR018095 Thymidylate kinase, conserved site VM_04890 IPR018094 Thymidylate kinase VM_04890 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_04890 IPR039430 Thymidylate kinase-like domain VM_04895 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_04895 IPR004622 DNA polymerase III, delta prime subunit VM_04895 IPR015199 DNA polymerase III, delta subunit, C-terminal VM_04895 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal VM_04900 IPR015991 Uncharacterised hydrolase TatD-type VM_04900 IPR018228 Deoxyribonuclease, TatD-related, conserved site VM_04900 IPR032466 Metal-dependent hydrolase VM_04900 IPR001130 TatD family VM_04905 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component VM_04905 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site VM_04905 IPR003352 Phosphotransferase system, EIIC VM_04905 IPR036878 Glucose permease domain IIB VM_04905 IPR013013 Phosphotransferase system, EIIC component, type 1 VM_04905 IPR001996 Phosphotransferase system, IIB component, type 1 VM_04905 IPR011299 PTS system glucose-specific IIBC component VM_04915 IPR000175 Sodium:neurotransmitter symporter VM_04915 IPR037272 Sodium:neurotransmitter symporter superfamily VM_04925 IPR002641 Patatin-like phospholipase domain VM_04925 IPR037483 YjjU-like VM_04925 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VM_04930 IPR036918 Pyruvate kinase, C-terminal domain superfamily VM_04930 IPR001697 Pyruvate kinase VM_04930 IPR015806 Pyruvate kinase, insert domain superfamily VM_04930 IPR040442 Pyruvate kinase-like domain superfamily VM_04930 IPR015793 Pyruvate kinase, barrel VM_04930 IPR015795 Pyruvate kinase, C-terminal VM_04930 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily VM_04930 IPR018209 Pyruvate kinase, active site VM_04930 IPR011037 Pyruvate kinase-like, insert domain superfamily VM_04935 IPR036390 Winged helix DNA-binding domain superfamily VM_04935 IPR036388 Winged helix-like DNA-binding domain superfamily VM_04935 IPR000600 ROK family VM_04940 IPR001789 Signal transduction response regulator, receiver domain VM_04940 IPR011006 CheY-like superfamily VM_04940 IPR002545 CheW-like domain VM_04940 IPR036061 CheW-like domain superfamily VM_04940 IPR024181 Chemotaxis response regulator CheV VM_04950 IPR018146 Glyoxalase I, conserved site VM_04950 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VM_04950 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VM_04950 IPR037523 Vicinal oxygen chelate (VOC) domain VM_04950 IPR004361 Glyoxalase I VM_04970 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted VM_04970 IPR025714 Methyltransferase domain VM_04970 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VM_04980 IPR011013 Galactose mutarotase-like domain superfamily VM_04980 IPR025532 Glucose-6-phosphate 1-epimerase VM_04980 IPR014718 Glycoside hydrolase-type carbohydrate-binding VM_04980 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase VM_04985 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I VM_04985 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain VM_04985 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain VM_04985 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family VM_04985 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site VM_04985 IPR036291 NAD(P)-binding domain superfamily VM_04990 IPR002579 Peptide methionine sulphoxide reductase MrsB VM_04990 IPR011057 Mss4-like superfamily VM_04990 IPR028427 Peptide methionine sulfoxide reductase VM_05000 IPR009749 Protein of unknown function DUF1315 VM_05005 IPR027473 L-asparaginase, C-terminal VM_05005 IPR041725 Type I (cytosolic) L-asparaginase VM_05005 IPR027474 L-asparaginase, N-terminal VM_05005 IPR037152 L-asparaginase, N-terminal domain superfamily VM_05005 IPR027475 Asparaginase/glutaminase, active site 2 VM_05005 IPR020827 Asparaginase/glutaminase, active site 1 VM_05005 IPR006034 Asparaginase/glutaminase-like VM_05005 IPR036152 Asparaginase/glutaminase-like superfamily VM_05005 IPR006033 Type I L-asparaginase family VM_05005 IPR040919 Asparaginase/glutaminase, C-terminal VM_05010 IPR033854 Signal peptide peptidase A VM_05010 IPR004635 Peptidase S49, SppA VM_05010 IPR029045 ClpP/crotonase-like domain superfamily VM_05010 IPR002142 Peptidase S49 VM_05010 IPR004634 Peptidase S49, protease IV VM_05015 IPR013785 Aldolase-type TIM barrel VM_05015 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal VM_05015 IPR023753 FAD/NAD(P)-binding domain VM_05015 IPR036188 FAD/NAD(P)-binding domain superfamily VM_05020 IPR002912 ACT domain VM_05020 IPR002376 Formyl transferase, N-terminal VM_05020 IPR036477 Formyl transferase, N-terminal domain superfamily VM_05020 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain VM_05020 IPR004810 Formyltetrahydrofolate deformylase VM_05030 IPR014001 Helicase superfamily 1/2, ATP-binding domain VM_05030 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type VM_05030 IPR006555 ATP-dependent helicase, C-terminal VM_05030 IPR006935 Helicase/UvrB, N-terminal VM_05030 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_05035 IPR000905 Gcp-like domain VM_05035 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB VM_05050 IPR000073 Alpha/beta hydrolase fold-1 VM_05050 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase VM_05050 IPR029058 Alpha/Beta hydrolase fold VM_05055 IPR042099 AMP-dependent synthetase-like superfamily VM_05055 IPR000873 AMP-dependent synthetase/ligase VM_05055 IPR020845 AMP-binding, conserved site VM_05055 IPR025110 AMP-binding enzyme, C-terminal domain VM_05060 IPR006292 Ribonuclease D VM_05060 IPR010997 HRDC-like superfamily VM_05060 IPR002121 HRDC domain VM_05060 IPR036397 Ribonuclease H superfamily VM_05060 IPR012337 Ribonuclease H-like superfamily VM_05060 IPR002562 3'-5' exonuclease domain VM_05070 IPR023662 Rhomboid protease GlpG VM_05070 IPR035952 Rhomboid-like superfamily VM_05070 IPR038236 GlpG peptidase, N-terminal domain superfamily VM_05070 IPR022764 Peptidase S54, rhomboid domain VM_05070 IPR022732 Peptidase S54, GlpG peptidase, N-terminal VM_05080 IPR006674 HD domain VM_05080 IPR023023 dNTP triphosphohydrolase, type 2 VM_05080 IPR006261 dNTP triphosphohydrolase VM_05080 IPR026875 Phosphohydrolase-associated domain VM_05080 IPR003607 HD/PDEase domain VM_05085 IPR039356 Metal-dependent nucleoside 5'-monophosphatase VM_05085 IPR022971 5'-deoxynucleotidase YfbR VM_05085 IPR003607 HD/PDEase domain VM_05090 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VM_05090 IPR015424 Pyridoxal phosphate-dependent transferase VM_05090 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VM_05090 IPR004839 Aminotransferase, class I/classII VM_05095 IPR005801 ADC synthase VM_05095 IPR004561 Isochorismate synthase VM_05095 IPR034681 Isochorismate synthase MenF VM_05095 IPR015890 Chorismate-utilising enzyme, C-terminal VM_05100 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase VM_05100 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding VM_05100 IPR029061 Thiamin diphosphate-binding fold VM_05100 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain VM_05100 IPR032264 Menaquinone biosynthesis protein MenD, middle domain VM_05105 IPR000073 Alpha/beta hydrolase fold-1 VM_05105 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase VM_05105 IPR029058 Alpha/Beta hydrolase fold VM_05110 IPR029045 ClpP/crotonase-like domain superfamily VM_05110 IPR001753 Enoyl-CoA hydratase/isomerase VM_05110 IPR014748 Enoyl-CoA hydratase, C-terminal VM_05110 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site VM_05110 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB VM_05115 IPR010196 o-Succinylbenzoate synthase, MenC type1 VM_05115 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal VM_05115 IPR029017 Enolase-like, N-terminal VM_05115 IPR029065 Enolase C-terminal domain-like VM_05115 IPR036849 Enolase-like, C-terminal domain superfamily VM_05120 IPR010192 2-succinylbenzoate--CoA ligase VM_05120 IPR042099 AMP-dependent synthetase-like superfamily VM_05120 IPR000873 AMP-dependent synthetase/ligase VM_05120 IPR020845 AMP-binding, conserved site VM_05120 IPR025110 AMP-binding enzyme, C-terminal domain VM_05125 IPR004711 Benzoate transporter VM_05130 IPR013096 Cupin 2, conserved barrel VM_05130 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VM_05130 IPR014710 RmlC-like jelly roll fold VM_05130 IPR001387 Cro/C1-type helix-turn-helix domain VM_05130 IPR011051 RmlC-like cupin domain superfamily VM_05135 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_05135 IPR003660 HAMP domain VM_05135 IPR004090 Chemotaxis methyl-accepting receptor VM_05140 IPR023727 Lysophospholipid transporter LplT VM_05140 IPR011701 Major facilitator superfamily VM_05140 IPR036259 MFS transporter superfamily VM_05160 IPR007298 Copper resistance lipoprotein NlpE VM_05165 IPR036707 Cell division topological specificity factor MinE superfamily VM_05165 IPR005527 Cell division topological specificity factor MinE VM_05170 IPR025501 ATP binding protein MinD VM_05170 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_05170 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain VM_05170 IPR010223 ATP binding protein MinD, bacterial-type VM_05175 IPR013033 Septum formation inhibitor MinC VM_05175 IPR005526 Septum formation inhibitor MinC, C-terminal VM_05175 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily VM_05175 IPR007874 Septum formation inhibitor MinC, N-terminal VM_05175 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily VM_05175 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal VM_05180 IPR027354 YcgL domain VM_05180 IPR038068 YcgL-like superfamily VM_05185 IPR031304 Transglycosylase SLT domain 2 VM_05185 IPR023346 Lysozyme-like domain superfamily VM_05185 IPR011757 Lytic transglycosylase MltB VM_05190 IPR036388 Winged helix-like DNA-binding domain superfamily VM_05190 IPR005119 LysR, substrate-binding VM_05190 IPR000847 Transcription regulator HTH, LysR VM_05190 IPR036390 Winged helix DNA-binding domain superfamily VM_05195 IPR008276 Concentrative nucleoside transporter VM_05195 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial VM_05195 IPR011657 Concentrative nucleoside transporter C-terminal domain VM_05195 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain VM_05195 IPR002668 Concentrative nucleoside transporter N-terminal domain VM_05200 IPR001223 Glycoside hydrolase family 18, catalytic domain VM_05200 IPR017853 Glycoside hydrolase superfamily VM_05200 IPR013783 Immunoglobulin-like fold VM_05200 IPR029070 Chitinase insertion domain superfamily VM_05200 IPR011583 Chitinase II VM_05200 IPR001579 Glycoside hydrolase, chitinase active site VM_05200 IPR013784 Carbohydrate-binding-like fold VM_05200 IPR008969 Carboxypeptidase-like, regulatory domain superfamily VM_05210 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site VM_05210 IPR036291 NAD(P)-binding domain superfamily VM_05210 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase VM_05210 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain VM_05210 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain VM_05230 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VM_05230 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily VM_05250 IPR000374 Phosphatidate cytidylyltransferase VM_05260 IPR005330 MHYT domain VM_05260 IPR029787 Nucleotide cyclase VM_05260 IPR000160 GGDEF domain VM_05260 IPR035919 EAL domain superfamily VM_05260 IPR035965 PAS domain superfamily VM_05260 IPR001633 EAL domain VM_05275 IPR003846 Protein adenylyltransferase SelO VM_05280 IPR038404 TRAP transporter solute receptor DctP superfamily VM_05280 IPR018389 TRAP transporter solute receptor DctP/TeaA VM_05280 IPR004682 TRAP transporter solute receptor, DctP family VM_05285 IPR007387 TRAP transporter, small membrane protein DctQ VM_05290 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VM_05290 IPR004681 TRAP transporter large membrane protein DctM VM_05295 IPR025944 Sigma-54 interaction domain, conserved site VM_05295 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VM_05295 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VM_05295 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_05295 IPR009057 Homeobox-like domain superfamily VM_05295 IPR011006 CheY-like superfamily VM_05295 IPR003593 AAA+ ATPase domain VM_05295 IPR002078 RNA polymerase sigma factor 54 interaction domain VM_05295 IPR001789 Signal transduction response regulator, receiver domain VM_05295 IPR002197 DNA binding HTH domain, Fis-type VM_05300 IPR033479 Double Cache domain 1 VM_05300 IPR003594 Histidine kinase/HSP90-like ATPase VM_05300 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VM_05300 IPR005467 Histidine kinase domain VM_05300 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VM_05300 IPR029151 Periplasmic sensor-like domain superfamily VM_05300 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_05300 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) VM_05300 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VM_05310 IPR005215 Trigger factor VM_05310 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VM_05310 IPR027304 Trigger factor/SurA domain superfamily VM_05310 IPR036611 Trigger factor ribosome-binding domain superfamily VM_05310 IPR008881 Trigger factor, ribosome-binding, bacterial VM_05310 IPR037041 Trigger factor, C-terminal domain superfamily VM_05310 IPR008880 Trigger factor, C-terminal VM_05315 IPR001907 ATP-dependent Clp protease proteolytic subunit VM_05315 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA VM_05315 IPR018215 ClpP, Ser active site VM_05315 IPR033135 ClpP, histidine active site VM_05315 IPR029045 ClpP/crotonase-like domain superfamily VM_05320 IPR004487 Clp protease, ATP-binding subunit ClpX VM_05320 IPR038366 Zinc finger, ClpX C4-type superfamily VM_05320 IPR003593 AAA+ ATPase domain VM_05320 IPR010603 Zinc finger, ClpX C4-type VM_05320 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_05320 IPR019489 Clp ATPase, C-terminal VM_05320 IPR003959 ATPase, AAA-type, core VM_05325 IPR027543 Lon protease, bacterial VM_05325 IPR020568 Ribosomal protein S5 domain 2-type fold VM_05325 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VM_05325 IPR003111 Lon, substrate-binding domain VM_05325 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_05325 IPR003959 ATPase, AAA-type, core VM_05325 IPR004815 Lon protease, bacterial/eukaryotic-type VM_05325 IPR008269 Peptidase S16, Lon proteolytic domain VM_05325 IPR027065 Lon protease VM_05325 IPR015947 PUA-like superfamily VM_05325 IPR003593 AAA+ ATPase domain VM_05330 IPR000119 Histone-like DNA-binding protein VM_05330 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily VM_05330 IPR020816 Histone-like DNA-binding protein, conserved site VM_05335 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type VM_05335 IPR027304 Trigger factor/SurA domain superfamily VM_05335 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site VM_05340 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 VM_05340 IPR004509 Competence protein ComEA, helix-hairpin-helix domain VM_05340 IPR010994 RuvA domain 2-like VM_05345 IPR002686 Transposase IS200-like VM_05345 IPR036515 Transposase IS200-like superfamily VM_05350 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_05350 IPR011994 Cytidylate kinase domain VM_05350 IPR003136 Cytidylate kinase VM_05355 IPR022967 RNA-binding domain, S1 VM_05355 IPR003029 S1 domain VM_05355 IPR012340 Nucleic acid-binding, OB-fold VM_05355 IPR000110 Ribosomal protein S1 VM_05360 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily VM_05360 IPR020816 Histone-like DNA-binding protein, conserved site VM_05360 IPR000119 Histone-like DNA-binding protein VM_05360 IPR005685 Integration host factor, beta subunit VM_05365 IPR032906 Lipopolysaccharide assembly protein A VM_05365 IPR010445 Lipopolysaccharide assembly protein A domain VM_05370 IPR013026 Tetratricopeptide repeat-containing domain VM_05370 IPR030865 Lipopolysaccharide assembly protein B VM_05370 IPR011990 Tetratricopeptide-like helical domain superfamily VM_05370 IPR019734 Tetratricopeptide repeat VM_05370 IPR041166 LapB, rubredoxin metal binding domain VM_05375 IPR014732 Orotidine 5'-phosphate decarboxylase VM_05375 IPR001754 Orotidine 5'-phosphate decarboxylase domain VM_05375 IPR011060 Ribulose-phosphate binding barrel VM_05375 IPR018089 Orotidine 5'-phosphate decarboxylase, active site VM_05375 IPR013785 Aldolase-type TIM barrel VM_05380 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VM_05380 IPR005467 Histidine kinase domain VM_05380 IPR003594 Histidine kinase/HSP90-like ATPase VM_05380 IPR029151 Periplasmic sensor-like domain superfamily VM_05380 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VM_05380 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_05380 IPR001789 Signal transduction response regulator, receiver domain VM_05380 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VM_05380 IPR011006 CheY-like superfamily VM_05380 IPR015387 LuxQ, periplasmic VM_05390 IPR003362 Bacterial sugar transferase VM_05390 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase VM_05395 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA VM_05395 IPR029044 Nucleotide-diphospho-sugar transferases VM_05395 IPR001173 Glycosyltransferase 2-like VM_05400 IPR001296 Glycosyl transferase, family 1 VM_05415 IPR001451 Hexapeptide repeat VM_05415 IPR039369 Galactoside O-acetyltransferase LacA-like VM_05415 IPR011004 Trimeric LpxA-like superfamily VM_05415 IPR024688 Maltose/galactoside acetyltransferase VM_05435 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain VM_05435 IPR001296 Glycosyl transferase, family 1 VM_05445 IPR001789 Signal transduction response regulator, receiver domain VM_05445 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_05445 IPR009057 Homeobox-like domain superfamily VM_05445 IPR025944 Sigma-54 interaction domain, conserved site VM_05445 IPR011006 CheY-like superfamily VM_05445 IPR003593 AAA+ ATPase domain VM_05445 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VM_05445 IPR002078 RNA polymerase sigma factor 54 interaction domain VM_05445 IPR002197 DNA binding HTH domain, Fis-type VM_05460 IPR019554 Soluble ligand binding domain VM_05460 IPR003715 Polysaccharide export protein VM_05490 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VM_05490 IPR035906 MetI-like superfamily VM_05495 IPR035906 MetI-like superfamily VM_05495 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VM_05495 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VM_05500 IPR030678 Peptide/nickel binding protein, MppA-type VM_05500 IPR039424 Solute-binding protein family 5 VM_05500 IPR023765 Solute-binding protein family 5, conserved site VM_05500 IPR000914 Solute-binding protein family 5 domain VM_05505 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_05505 IPR003593 AAA+ ATPase domain VM_05505 IPR003439 ABC transporter-like VM_05505 IPR017871 ABC transporter, conserved site VM_05505 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal VM_05525 IPR012347 Ferritin-like VM_05525 IPR009078 Ferritin-like superfamily VM_05525 IPR010386 tRNA-hydroxylase MiaE VM_05535 IPR036390 Winged helix DNA-binding domain superfamily VM_05535 IPR036388 Winged helix-like DNA-binding domain superfamily VM_05535 IPR000847 Transcription regulator HTH, LysR VM_05535 IPR005119 LysR, substrate-binding VM_05545 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain VM_05545 IPR036291 NAD(P)-binding domain superfamily VM_05545 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal VM_05545 IPR008141 Alanine dehydrogenase VM_05545 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 VM_05550 IPR019888 Transcription regulator AsnC-type VM_05550 IPR036390 Winged helix DNA-binding domain superfamily VM_05550 IPR036388 Winged helix-like DNA-binding domain superfamily VM_05550 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VM_05550 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VM_05550 IPR011008 Dimeric alpha-beta barrel VM_05550 IPR000485 AsnC-type HTH domain VM_05550 IPR011991 ArsR-like helix-turn-helix domain VM_05555 IPR041027 FtsK alpha domain VM_05555 IPR025199 DNA translocase FtsK, 4TM region VM_05555 IPR036388 Winged helix-like DNA-binding domain superfamily VM_05555 IPR036390 Winged helix DNA-binding domain superfamily VM_05555 IPR018541 FtsK gamma domain VM_05555 IPR002543 FtsK domain VM_05555 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_05560 IPR023380 DsbB-like superfamily VM_05560 IPR022920 Disulphide bond formation protein DsbB VM_05560 IPR003752 Disulphide bond formation protein DsbB/BdbC VM_05565 IPR004671 Na+/H+ antiporter NhaB VM_05570 IPR036390 Winged helix DNA-binding domain superfamily VM_05570 IPR036388 Winged helix-like DNA-binding domain superfamily VM_05570 IPR014178 Fatty acid response transcription factor FadR VM_05570 IPR028374 FadR, C-terminal domain VM_05570 IPR008920 Transcription regulator FadR/GntR, C-terminal VM_05570 IPR000524 Transcription regulator HTH, GntR VM_05585 IPR019808 Histidine triad, conserved site VM_05585 IPR001310 Histidine triad (HIT) protein VM_05585 IPR011146 HIT-like domain VM_05585 IPR036265 HIT-like superfamily VM_05600 IPR012640 Membrane lipoprotein, lipid attachment site VM_05600 IPR014094 Penicillin-binding protein activator LpoB VM_05605 IPR014093 Thiamine kinase VM_05605 IPR011009 Protein kinase-like domain superfamily VM_05605 IPR002575 Aminoglycoside phosphotransferase VM_05610 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA VM_05610 IPR029058 Alpha/Beta hydrolase fold VM_05610 IPR022987 Uncharacterised protein family UPF0227 VM_05615 IPR023753 FAD/NAD(P)-binding domain VM_05615 IPR036188 FAD/NAD(P)-binding domain superfamily VM_05630 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_05630 IPR014001 Helicase superfamily 1/2, ATP-binding domain VM_05630 IPR003711 CarD-like/TRCF domain VM_05630 IPR036101 CarD-like/TRCF domain superfamily VM_05630 IPR041471 UvrB, interaction domain VM_05630 IPR011545 DEAD/DEAH box helicase domain VM_05630 IPR004576 Transcription-repair coupling factor VM_05630 IPR005118 Transcription-repair-coupling factor, C-terminal domain VM_05630 IPR037235 TRCF-like, C-terminal domain VM_05630 IPR001650 Helicase, C-terminal VM_05640 IPR025857 MacB-like periplasmic core domain VM_05640 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E VM_05640 IPR003838 ABC transporter permease protein domain VM_05645 IPR003439 ABC transporter-like VM_05645 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_05645 IPR017871 ABC transporter, conserved site VM_05645 IPR015854 ABC transporter, lipoprotein release, LolD VM_05645 IPR003593 AAA+ ATPase domain VM_05645 IPR011924 Lipoprotein releasing system, ATP-binding protein VM_05650 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E VM_05650 IPR011926 Lipoprotein-releasing system transmembrane protein LolE, gammaproteobacteria type VM_05650 IPR025857 MacB-like periplasmic core domain VM_05650 IPR003838 ABC transporter permease protein domain VM_05660 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VM_05660 IPR035681 ComA-like, MBL domain VM_05660 IPR004477 ComEC/Rec2-related protein VM_05660 IPR001279 Metallo-beta-lactamase VM_05660 IPR004797 Competence protein ComEC/Rec2 VM_05660 IPR025405 Domain of unknown function DUF4131 VM_05665 IPR036640 ABC transporter type 1, transmembrane domain superfamily VM_05665 IPR011527 ABC transporter type 1, transmembrane domain VM_05665 IPR039421 Type I protein exporter VM_05665 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_05665 IPR003593 AAA+ ATPase domain VM_05665 IPR017871 ABC transporter, conserved site VM_05665 IPR003439 ABC transporter-like VM_05665 IPR011917 ABC transporter, lipid A export, MsbA VM_05670 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_05670 IPR003758 Tetraacyldisaccharide 4'-kinase VM_05675 IPR005651 Trm112-like VM_05680 IPR029044 Nucleotide-diphospho-sugar transferases VM_05680 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase VM_05680 IPR003329 Acylneuraminate cytidylyltransferase VM_05690 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_05690 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VM_05690 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VM_05690 IPR013727 Two-component sensor kinase, N-terminal VM_05690 IPR005467 Histidine kinase domain VM_05690 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VM_05690 IPR003594 Histidine kinase/HSP90-like ATPase VM_05690 IPR003660 HAMP domain VM_05695 IPR001789 Signal transduction response regulator, receiver domain VM_05695 IPR036388 Winged helix-like DNA-binding domain superfamily VM_05695 IPR001867 OmpR/PhoB-type DNA-binding domain VM_05695 IPR039420 Transcriptional regulatory protein WalR-like VM_05695 IPR011006 CheY-like superfamily VM_05695 IPR016032 Signal transduction response regulator, C-terminal effector VM_05700 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component VM_05700 IPR011299 PTS system glucose-specific IIBC component VM_05700 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site VM_05700 IPR001996 Phosphotransferase system, IIB component, type 1 VM_05700 IPR013013 Phosphotransferase system, EIIC component, type 1 VM_05700 IPR003352 Phosphotransferase system, EIIC VM_05700 IPR036878 Glucose permease domain IIB VM_05705 IPR007390 Sporulation stage V, protein R VM_05710 IPR006698 Uncharacterised protein family UPF0229 VM_05715 IPR016230 Serine-protein kinase, PrkA VM_05715 IPR013153 PrkA AAA domain VM_05715 IPR010650 PrkA C-terminal domain VM_05715 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_05720 IPR023145 YfbU, helix-hairpin domain superfamily VM_05720 IPR023146 YfbU, alpha-helical bundle domain superfamily VM_05720 IPR005587 Uncharacterised protein family UPF0304, YfbU VM_05730 IPR012839 Organic radical enzyme activase VM_05730 IPR012838 Pyruvate formate-lyase 1 activating enzyme VM_05730 IPR007197 Radical SAM VM_05730 IPR013785 Aldolase-type TIM barrel VM_05730 IPR034457 Organic radical-activating enzymes VM_05730 IPR034465 Pyruvate formate-lyase activase VM_05730 IPR001989 Radical-activating enzyme, conserved site VM_05735 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding VM_05735 IPR033479 Double Cache domain 1 VM_05735 IPR029151 Periplasmic sensor-like domain superfamily VM_05735 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_05735 IPR003660 HAMP domain VM_05745 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VM_05745 IPR004184 Pyruvate formate lyase domain VM_05745 IPR001150 Glycine radical domain VM_05745 IPR005949 Formate acetyltransferase VM_05755 IPR003439 ABC transporter-like VM_05755 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type VM_05755 IPR003593 AAA+ ATPase domain VM_05755 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_05755 IPR017871 ABC transporter, conserved site VM_05760 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter VM_05760 IPR018313 Solute-binding protein family 3, conserved site VM_05760 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VM_05765 IPR035906 MetI-like superfamily VM_05765 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain VM_05765 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VM_05765 IPR030199 Histidine transport system permease protein HisQ VM_05770 IPR035906 MetI-like superfamily VM_05770 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain VM_05770 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VM_05775 IPR037493 Exodeoxyribonuclease III-like VM_05775 IPR004808 AP endonuclease 1 VM_05775 IPR020847 AP endonuclease 1, binding site VM_05775 IPR020848 AP endonuclease 1, conserved site VM_05775 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VM_05775 IPR005135 Endonuclease/exonuclease/phosphatase VM_05780 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_05780 IPR003660 HAMP domain VM_05785 IPR019630 Protein of unknown function DUF2496, YbaM-related VM_05790 IPR010890 Primosomal replication PriB/PriC VM_05790 IPR038338 PriB/PriC superfamily VM_05795 IPR002781 Transmembrane protein TauE-like VM_05800 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_05800 IPR001650 Helicase, C-terminal VM_05800 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type VM_05800 IPR039000 ATP-dependent DNA helicase DinG VM_05800 IPR010614 DEAD2 VM_05800 IPR006555 ATP-dependent helicase, C-terminal VM_05810 IPR023006 Uncharacterised protein family UPF0225 VM_05810 IPR004027 SEC-C motif VM_05810 IPR032710 NTF2-like domain superfamily VM_05815 IPR035919 EAL domain superfamily VM_05815 IPR001633 EAL domain VM_05815 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing VM_05815 IPR013976 Metal-dependent hydrolase HDOD VM_05820 IPR010138 UDP-2,3-diacylglucosamine hydrolase VM_05820 IPR029052 Metallo-dependent phosphatase-like VM_05820 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type VM_05825 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain VM_05825 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site VM_05825 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase VM_05825 IPR029000 Cyclophilin-like domain superfamily VM_05830 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding VM_05830 IPR015803 Cysteine-tRNA ligase VM_05830 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR VM_05830 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase VM_05830 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_05830 IPR032678 tRNA synthetases class I, catalytic domain VM_05835 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site VM_05835 IPR012337 Ribonuclease H-like superfamily VM_05835 IPR036397 Ribonuclease H superfamily VM_05835 IPR002176 Crossover junction endodeoxyribonuclease RuvC VM_05840 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial VM_05840 IPR012340 Nucleic acid-binding, OB-fold VM_05840 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 VM_05840 IPR000085 Bacterial DNA recombination protein RuvA VM_05840 IPR010994 RuvA domain 2-like VM_05840 IPR011114 Holliday junction DNA helicase RuvA, C-terminal VM_05840 IPR036267 RuvA, C-terminal domain superfamily VM_05845 IPR003593 AAA+ ATPase domain VM_05845 IPR036390 Winged helix DNA-binding domain superfamily VM_05845 IPR036388 Winged helix-like DNA-binding domain superfamily VM_05845 IPR008824 RuvB-like P-loop domain VM_05845 IPR008823 RuvB C-terminal winged helix domain VM_05845 IPR004605 DNA helicase, Holliday junction RuvB-type VM_05845 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_05845 IPR041445 RuvB, AAA lid domain VM_05850 IPR002585 Cytochrome ubiquinol oxidase subunit 1 VM_05855 IPR003317 Cytochrome ubiquinol oxidase subunit 2 VM_05860 IPR011724 Cyd operon protein YbgT VM_05860 IPR012994 Membrane bound YbgT-like VM_05870 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family VM_05870 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site VM_05870 IPR029069 HotDog domain superfamily VM_05870 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase VM_05870 IPR006683 Thioesterase domain VM_05875 IPR002898 MotA/TolQ/ExbB proton channel VM_05875 IPR014163 Tol-Pal system, TolQ VM_05880 IPR003400 Biopolymer transport protein ExbD/TolR VM_05880 IPR014168 Tol-Pal system protein TolR VM_05890 IPR007195 TolB, N-terminal VM_05890 IPR011659 WD40-like Beta Propeller VM_05890 IPR036752 TolB, N-terminal domain superfamily VM_05890 IPR014167 Tol-Pal system protein TolB VM_05890 IPR011042 Six-bladed beta-propeller, TolB-like VM_05895 IPR006690 Outer membrane protein, OmpA-like, conserved site VM_05895 IPR039001 Peptidoglycan-associated lipoprotein VM_05895 IPR006664 Outer membrane protein, bacterial VM_05895 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal VM_05895 IPR036737 OmpA-like domain superfamily VM_05895 IPR006665 OmpA-like domain VM_05905 IPR023513 Quinolinate synthase A, type 1 VM_05905 IPR036094 Quinolinate synthetase A superfamily VM_05905 IPR003473 Quinolinate synthetase A VM_05915 IPR001789 Signal transduction response regulator, receiver domain VM_05915 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VM_05915 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_05915 IPR029151 Periplasmic sensor-like domain superfamily VM_05915 IPR015387 LuxQ, periplasmic VM_05915 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VM_05915 IPR005467 Histidine kinase domain VM_05915 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VM_05915 IPR011006 CheY-like superfamily VM_05915 IPR003594 Histidine kinase/HSP90-like ATPase VM_05920 IPR010574 L-alanine exporter AlaE VM_05925 IPR011051 RmlC-like cupin domain superfamily VM_05925 IPR014710 RmlC-like jelly roll fold VM_05925 IPR018050 Phosphomannose isomerase, type I, conserved site VM_05925 IPR016305 Mannose-6-phosphate isomerase VM_05925 IPR001250 Mannose-6-phosphate isomerase, type I VM_05930 IPR003501 Phosphotransferase system, EIIB component, type 2/3 VM_05930 IPR016152 Phosphotransferase/anion transporter VM_05930 IPR004715 Phosphotransferase system, IIA component fructose subfamily VM_05930 IPR003353 Phosphotransferase system, fructose-specific IIB subunit VM_05930 IPR006327 Phosphotransferase system, fructose IIC component VM_05930 IPR003352 Phosphotransferase system, EIIC VM_05930 IPR013011 Phosphotransferase system, EIIB component, type 2 VM_05930 IPR013014 Phosphotransferase system, EIIC component, type 2 VM_05930 IPR002178 PTS EIIA type-2 domain VM_05930 IPR036095 PTS system IIB component-like superfamily VM_05935 IPR009057 Homeobox-like domain superfamily VM_05935 IPR018060 DNA binding HTH domain, AraC-type VM_05935 IPR018062 HTH domain AraC-type, conserved site VM_05935 IPR020449 Transcription regulator HTH, AraC- type VM_05945 IPR036095 PTS system IIB component-like superfamily VM_05945 IPR003353 Phosphotransferase system, fructose-specific IIB subunit VM_05945 IPR003501 Phosphotransferase system, EIIB component, type 2/3 VM_05945 IPR013011 Phosphotransferase system, EIIB component, type 2 VM_05950 IPR013014 Phosphotransferase system, EIIC component, type 2 VM_05950 IPR006327 Phosphotransferase system, fructose IIC component VM_05955 IPR015424 Pyridoxal phosphate-dependent transferase VM_05955 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VM_05955 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VM_05955 IPR036388 Winged helix-like DNA-binding domain superfamily VM_05955 IPR036390 Winged helix DNA-binding domain superfamily VM_05955 IPR004839 Aminotransferase, class I/classII VM_05955 IPR000524 Transcription regulator HTH, GntR VM_05965 IPR012939 Glycosyl hydrolase family 92 VM_05965 IPR005887 Alpha-1,2-mannosidase, putative VM_05965 IPR014718 Glycoside hydrolase-type carbohydrate-binding VM_05965 IPR041371 Glycosyl hydrolase family 92 N-terminal domain VM_05965 IPR008928 Six-hairpin glycosidase superfamily VM_05970 IPR014718 Glycoside hydrolase-type carbohydrate-binding VM_05970 IPR005887 Alpha-1,2-mannosidase, putative VM_05970 IPR041371 Glycosyl hydrolase family 92 N-terminal domain VM_05970 IPR012939 Glycosyl hydrolase family 92 VM_05970 IPR008928 Six-hairpin glycosidase superfamily VM_05980 IPR012939 Glycosyl hydrolase family 92 VM_05980 IPR041371 Glycosyl hydrolase family 92 N-terminal domain VM_05980 IPR014718 Glycoside hydrolase-type carbohydrate-binding VM_05980 IPR005887 Alpha-1,2-mannosidase, putative VM_05980 IPR008928 Six-hairpin glycosidase superfamily VM_05985 IPR008928 Six-hairpin glycosidase superfamily VM_05985 IPR012939 Glycosyl hydrolase family 92 VM_05985 IPR014718 Glycoside hydrolase-type carbohydrate-binding VM_05985 IPR041371 Glycosyl hydrolase family 92 N-terminal domain VM_05985 IPR005887 Alpha-1,2-mannosidase, putative VM_05990 IPR013014 Phosphotransferase system, EIIC component, type 2 VM_05990 IPR006327 Phosphotransferase system, fructose IIC component VM_06010 IPR009057 Homeobox-like domain superfamily VM_06010 IPR038965 Transposase InsF-like VM_06055 IPR036086 ParB/Sulfiredoxin superfamily VM_06055 IPR003115 ParB/Sulfiredoxin VM_06060 IPR002500 Phosphoadenosine phosphosulphate reductase VM_06060 IPR021845 Protein of unknown function DUF3440 VM_06060 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_06065 IPR003343 Bacterial Ig-like, group 2 VM_06065 IPR021884 Ice-binding protein-like VM_06065 IPR008964 Invasin/intimin cell-adhesion fragments VM_06070 IPR017850 Alkaline-phosphatase-like, core domain superfamily VM_06070 IPR032506 Domain of unknown function DUF4976 VM_06070 IPR024607 Sulfatase, conserved site VM_06070 IPR000917 Sulfatase, N-terminal VM_06075 IPR002823 Protein of unknown function DUF112, transmembrane VM_06090 IPR036388 Winged helix-like DNA-binding domain superfamily VM_06090 IPR036390 Winged helix DNA-binding domain superfamily VM_06090 IPR000847 Transcription regulator HTH, LysR VM_06090 IPR005119 LysR, substrate-binding VM_06105 IPR025887 Glycoside hydrolase family 31, N-terminal domain VM_06105 IPR011013 Galactose mutarotase-like domain superfamily VM_06105 IPR033403 Domain of unknown function DUF5110 VM_06105 IPR032513 Alpha-glucosidase, domain of unknown function DUF4968 VM_06105 IPR017853 Glycoside hydrolase superfamily VM_06105 IPR013780 Glycosyl hydrolase, all-beta VM_06105 IPR030458 Glycosyl hydrolases family 31, active site VM_06105 IPR000322 Glycoside hydrolase family 31 VM_06105 IPR030459 Glycosyl hydrolases family 31, conserved site VM_06110 IPR018062 HTH domain AraC-type, conserved site VM_06110 IPR009057 Homeobox-like domain superfamily VM_06110 IPR020449 Transcription regulator HTH, AraC- type VM_06110 IPR014710 RmlC-like jelly roll fold VM_06110 IPR018060 DNA binding HTH domain, AraC-type VM_06110 IPR037923 Transcription regulator HTH-like VM_06110 IPR003313 AraC-type arabinose-binding/dimerisation domain VM_06110 IPR023699 Transcription activator HTH, RhaR VM_06170 IPR022399 Helicase/secretion neighbourhood ATPase VM_06170 IPR001482 Type II/IV secretion system protein VM_06170 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_06195 IPR008979 Galactose-binding-like domain superfamily VM_06195 IPR006101 Glycoside hydrolase, family 2 VM_06195 IPR006104 Glycosyl hydrolases family 2, sugar binding domain VM_06195 IPR023232 Glycoside hydrolase, family 2, active site VM_06195 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase VM_06195 IPR011013 Galactose mutarotase-like domain superfamily VM_06195 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily VM_06195 IPR004199 Beta galactosidase small chain/ domain 5 VM_06195 IPR006103 Glycoside hydrolase family 2, catalytic domain VM_06195 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich VM_06195 IPR014718 Glycoside hydrolase-type carbohydrate-binding VM_06195 IPR017853 Glycoside hydrolase superfamily VM_06195 IPR023230 Glycoside hydrolase, family 2, conserved site VM_06195 IPR013783 Immunoglobulin-like fold VM_06195 IPR032312 Beta-galactosidase, domain 4 VM_06205 IPR035472 RpiR-like, SIS domain VM_06205 IPR001347 Sugar isomerase (SIS) VM_06205 IPR000281 Helix-turn-helix protein RpiR VM_06205 IPR036388 Winged helix-like DNA-binding domain superfamily VM_06205 IPR009057 Homeobox-like domain superfamily VM_06210 IPR004669 C4-dicarboxylate anaerobic carrier VM_06210 IPR018385 C4-dicarboxylate anaerobic carrier-like VM_06215 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site VM_06215 IPR002933 Peptidase M20 VM_06215 IPR011650 Peptidase M20, dimerisation domain VM_06215 IPR010161 Peptidase M20B, tripeptide aminopeptidase VM_06215 IPR036264 Bacterial exopeptidase dimerisation domain VM_06220 IPR029062 Class I glutamine amidotransferase-like VM_06220 IPR005320 Peptidase S51 VM_06220 IPR023172 Peptidase S51, dipeptidase E VM_06225 IPR016032 Signal transduction response regulator, C-terminal effector VM_06225 IPR035919 EAL domain superfamily VM_06225 IPR001633 EAL domain VM_06225 IPR000792 Transcription regulator LuxR, C-terminal VM_06225 IPR036388 Winged helix-like DNA-binding domain superfamily VM_06230 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VM_06230 IPR001036 Acriflavin resistance protein VM_06230 IPR022831 Multidrug resistance protein MdtB VM_06235 IPR006143 RND efflux pump, membrane fusion protein VM_06235 IPR022824 Multidrug resistance protein MdtA VM_06235 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VM_06240 IPR009057 Homeobox-like domain superfamily VM_06240 IPR001647 DNA-binding HTH domain, TetR-type VM_06240 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VM_06240 IPR019915 Transcription regulator, pyrimidine utilisation, RutR VM_06240 IPR013573 Transcription regulator YcdC, C-terminal VM_06245 IPR016160 Aldehyde dehydrogenase, cysteine active site VM_06245 IPR016163 Aldehyde dehydrogenase, C-terminal VM_06245 IPR010102 Succinate semialdehyde dehydrogenase VM_06245 IPR016162 Aldehyde dehydrogenase, N-terminal VM_06245 IPR029510 Aldehyde dehydrogenase, glutamic acid active site VM_06245 IPR016161 Aldehyde/histidinol dehydrogenase VM_06245 IPR015590 Aldehyde dehydrogenase domain VM_06250 IPR009971 Protein of unknown function DUF1496 VM_06260 IPR032551 HTH-type transcriptional repressor, C-terminal VM_06260 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VM_06260 IPR001647 DNA-binding HTH domain, TetR-type VM_06260 IPR009057 Homeobox-like domain superfamily VM_06260 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VM_06265 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal VM_06265 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily VM_06265 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily VM_06265 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type VM_06265 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain VM_06265 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal VM_06265 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal VM_06270 IPR024906 Enoyl reductase FAD binding domain VM_06270 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative VM_06270 IPR010758 Trans-2-enoyl-CoA reductase VM_06275 IPR012340 Nucleic acid-binding, OB-fold VM_06275 IPR022967 RNA-binding domain, S1 VM_06275 IPR004368 Translation initiation factor IF-1 VM_06275 IPR006196 RNA-binding domain, S1, IF1 type VM_06280 IPR016181 Acyl-CoA N-acyltransferase VM_06280 IPR007472 N-end rule aminoacyl transferase, C-terminal VM_06280 IPR007471 N-end aminoacyl transferase, N-terminal VM_06280 IPR030700 N-end rule aminoacyl transferase VM_06280 IPR017138 Aspartate/glutamate leucyltransferase VM_06285 IPR016181 Acyl-CoA N-acyltransferase VM_06285 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase VM_06285 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal VM_06295 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site VM_06295 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase VM_06295 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta VM_06295 IPR036968 Enolpyruvate transferase domain superfamily VM_06295 IPR001986 Enolpyruvate transferase domain VM_06300 IPR019633 Protein of unknown function DUF2498 VM_06300 IPR038191 YciN superfamily VM_06305 IPR013497 DNA topoisomerase, type IA, central VM_06305 IPR023406 DNA topoisomerase, type IA, active site VM_06305 IPR006171 TOPRIM domain VM_06305 IPR028612 DNA topoisomerase I, type IA VM_06305 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type VM_06305 IPR003601 DNA topoisomerase, type IA, domain 2 VM_06305 IPR005733 DNA topoisomerase I, bacterial-type VM_06305 IPR013498 DNA topoisomerase, type IA, zn finger VM_06305 IPR003602 DNA topoisomerase, type IA, DNA-binding domain VM_06305 IPR023405 DNA topoisomerase, type IA, core domain VM_06305 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 VM_06305 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 VM_06305 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 VM_06305 IPR000380 DNA topoisomerase, type IA VM_06305 IPR034149 DNA topoisomerase 1, TOPRIM domain VM_06315 IPR001296 Glycosyl transferase, family 1 VM_06315 IPR013534 Starch synthase, catalytic domain VM_06315 IPR011835 Bacterial/plant glycogen synthase VM_06340 IPR023588 Transcription regulator HTH, PurR VM_06340 IPR028082 Periplasmic binding protein-like I VM_06340 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VM_06340 IPR000843 LacI-type HTH domain VM_06345 IPR036411 TorD-like superfamily VM_06345 IPR036386 HscB, C-terminal domain superfamily VM_06345 IPR020945 DMSO/Nitrate reductase chaperone VM_06345 IPR023069 Chaperone TorD VM_06350 IPR036388 Winged helix-like DNA-binding domain superfamily VM_06350 IPR039420 Transcriptional regulatory protein WalR-like VM_06350 IPR001789 Signal transduction response regulator, receiver domain VM_06350 IPR001867 OmpR/PhoB-type DNA-binding domain VM_06350 IPR011006 CheY-like superfamily VM_06355 IPR012337 Ribonuclease H-like superfamily VM_06355 IPR038215 Transposase, Tn5-like, N-terminal domain superfamily VM_06355 IPR002559 Transposase, IS4-like VM_06355 IPR014735 Transposase, Tn5-like, N-terminal VM_06355 IPR003201 Transposase Tn5, dimerisation VM_06355 IPR014736 Transposase, Tn5-like, core VM_06355 IPR014737 Transposase, Tn5-like, C-terminal VM_06360 IPR003848 Domain of unknown function DUF218 VM_06365 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VM_06365 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase VM_06370 IPR036390 Winged helix DNA-binding domain superfamily VM_06370 IPR005582 Chromosome partition protein MukF VM_06370 IPR033441 Chromosome partition protein MukF, C-terminal domain VM_06370 IPR036388 Winged helix-like DNA-binding domain superfamily VM_06370 IPR038198 MukF, C-terminal domain superfamily VM_06370 IPR033440 Chromosome partition protein MukF, middle domain VM_06370 IPR036141 MukF, middle domain superfamily VM_06370 IPR033439 Chromosome partition protein MukF, winged-helix domain VM_06375 IPR042037 MukE, C-terminal domain VM_06375 IPR042038 MukE, N-terminal domain VM_06375 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE VM_06380 IPR007406 MukB, N-terminal domain VM_06380 IPR012090 Chromosome partition protein MukB VM_06380 IPR032520 MukB, hinge domain VM_06380 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_06385 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VM_06385 IPR011991 ArsR-like helix-turn-helix domain VM_06385 IPR000485 AsnC-type HTH domain VM_06385 IPR011008 Dimeric alpha-beta barrel VM_06385 IPR036388 Winged helix-like DNA-binding domain superfamily VM_06385 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VM_06385 IPR019888 Transcription regulator AsnC-type VM_06385 IPR036390 Winged helix DNA-binding domain superfamily VM_06390 IPR001123 Amino acid exporter protein, LeuE-type VM_06395 IPR020612 Methylthiotransferase, conserved site VM_06395 IPR007197 Radical SAM VM_06395 IPR006638 Elp3/MiaB/NifB VM_06395 IPR023404 Radical SAM, alpha/beta horseshoe VM_06395 IPR022946 Uncharacterised protein family UPF0313 VM_06395 IPR013704 Uncharacterised protein family UPF0313, N-terminal VM_06395 IPR024560 Uncharacterised protein family UPF0313, C-terminal VM_06400 IPR029016 GAF-like domain superfamily VM_06400 IPR000160 GGDEF domain VM_06400 IPR000700 PAS-associated, C-terminal VM_06400 IPR029787 Nucleotide cyclase VM_06400 IPR000014 PAS domain VM_06400 IPR003018 GAF domain VM_06400 IPR035919 EAL domain superfamily VM_06400 IPR001610 PAC motif VM_06400 IPR001633 EAL domain VM_06400 IPR013767 PAS fold VM_06400 IPR035965 PAS domain superfamily VM_06405 IPR007863 Peptidase M16, C-terminal VM_06405 IPR011765 Peptidase M16, N-terminal VM_06405 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like VM_06405 IPR001431 Peptidase M16, zinc-binding site VM_06420 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain VM_06420 IPR005119 LysR, substrate-binding VM_06420 IPR036390 Winged helix DNA-binding domain superfamily VM_06420 IPR036388 Winged helix-like DNA-binding domain superfamily VM_06420 IPR000847 Transcription regulator HTH, LysR VM_06425 IPR038071 UROD/MetE-like superfamily VM_06425 IPR006276 Cobalamin-independent methionine synthase VM_06425 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal VM_06425 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal VM_06435 IPR005545 YCII-related VM_06435 IPR011008 Dimeric alpha-beta barrel VM_06440 IPR029069 HotDog domain superfamily VM_06440 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain VM_06440 IPR006683 Thioesterase domain VM_06440 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase VM_06445 IPR006008 Intracellular septation protein A VM_06450 IPR005330 MHYT domain VM_06450 IPR000160 GGDEF domain VM_06450 IPR029787 Nucleotide cyclase VM_06450 IPR001633 EAL domain VM_06450 IPR035919 EAL domain superfamily VM_06460 IPR003848 Domain of unknown function DUF218 VM_06460 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_06465 IPR036291 NAD(P)-binding domain superfamily VM_06465 IPR001509 NAD-dependent epimerase/dehydratase VM_06475 IPR023271 Aquaporin-like VM_06475 IPR024002 Formate/nitrite transporter, conserved site VM_06475 IPR023999 Formate transporter FocA, putative VM_06475 IPR000292 Formate/nitrite transporter VM_06485 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE VM_06485 IPR004448 Nitrate reductas, NapE, periplasmic VM_06490 IPR038266 NapC/NirT cytochrome c superfamily VM_06490 IPR036280 Multiheme cytochrome superfamily VM_06490 IPR011031 Multihaem cytochrome VM_06490 IPR024717 Denitrification system component NapC/NirT/NrfH VM_06490 IPR005126 NapC/NirT cytochrome c, N-terminal VM_06490 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT VM_06495 IPR041460 Molybdopterin oxidoreductase, N-terminal VM_06495 IPR006311 Twin-arginine translocation pathway, signal sequence VM_06495 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site VM_06495 IPR041954 Trimethylamine-N-oxide reductase-like, molybdopterin-binding domain VM_06495 IPR009010 Aspartate decarboxylase-like domain superfamily VM_06495 IPR006656 Molybdopterin oxidoreductase VM_06495 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VM_06495 IPR006657 Molybdopterin dinucleotide-binding domain VM_06495 IPR011887 Trimethylamine-N-oxide reductase TorA VM_06500 IPR009057 Homeobox-like domain superfamily VM_06500 IPR038965 Transposase InsF-like VM_06510 IPR010914 RsgA GTPase domain VM_06510 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain VM_06510 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_06510 IPR004881 Ribosome biogenesis GTPase RsgA VM_06520 IPR004097 DHHA2 domain VM_06520 IPR022934 Manganese-dependent inorganic pyrophosphatase, probable VM_06520 IPR001667 DDH domain VM_06520 IPR038763 DHH phosphoesterase superfamily VM_06520 IPR038222 DHHA2 domain superfamily VM_06535 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_06535 IPR003439 ABC transporter-like VM_06535 IPR017871 ABC transporter, conserved site VM_06535 IPR003593 AAA+ ATPase domain VM_06540 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_06540 IPR003593 AAA+ ATPase domain VM_06540 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal VM_06540 IPR003439 ABC transporter-like VM_06545 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VM_06545 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VM_06545 IPR035906 MetI-like superfamily VM_06550 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VM_06550 IPR035906 MetI-like superfamily VM_06555 IPR030678 Peptide/nickel binding protein, MppA-type VM_06555 IPR023765 Solute-binding protein family 5, conserved site VM_06555 IPR000914 Solute-binding protein family 5 domain VM_06555 IPR039424 Solute-binding protein family 5 VM_06560 IPR002197 DNA binding HTH domain, Fis-type VM_06560 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_06560 IPR002078 RNA polymerase sigma factor 54 interaction domain VM_06560 IPR025944 Sigma-54 interaction domain, conserved site VM_06560 IPR009057 Homeobox-like domain superfamily VM_06560 IPR014317 Transcription activator PspF VM_06560 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VM_06560 IPR003593 AAA+ ATPase domain VM_06565 IPR007157 PspA/IM30 VM_06565 IPR014319 Phage shock protein, PspA VM_06580 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal VM_06580 IPR036291 NAD(P)-binding domain superfamily VM_06580 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase VM_06580 IPR033922 NAD(P) binding domain of glutamate dehydrogenase VM_06580 IPR014362 Glutamate dehydrogenase VM_06580 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain VM_06580 IPR033524 Leu/Phe/Val dehydrogenases active site VM_06585 IPR005019 Methyladenine glycosylase VM_06585 IPR029062 Class I glutamine amidotransferase-like VM_06585 IPR011257 DNA glycosylase VM_06585 IPR001674 GMP synthase, C-terminal VM_06585 IPR017926 Glutamine amidotransferase VM_06585 IPR025777 GMP synthetase ATP pyrophosphatase domain VM_06585 IPR000182 GNAT domain VM_06585 IPR016181 Acyl-CoA N-acyltransferase VM_06585 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_06590 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme VM_06590 IPR006233 Cystathionine beta-lyase, bacterial VM_06590 IPR015424 Pyridoxal phosphate-dependent transferase VM_06590 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VM_06590 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VM_06595 IPR025202 Phospholipase D-like domain VM_06595 IPR001736 Phospholipase D/Transphosphatidylase VM_06595 IPR027379 Cardiolipin synthase N-terminal VM_06595 IPR030840 Cardiolipin synthase A VM_06595 IPR022924 Cardiolipin synthase VM_06600 IPR037272 Sodium:neurotransmitter symporter superfamily VM_06600 IPR000175 Sodium:neurotransmitter symporter VM_06605 IPR020103 Pseudouridine synthase, catalytic domain superfamily VM_06605 IPR006508 Pseudouridine synthase, RluA-like VM_06605 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site VM_06605 IPR006145 Pseudouridine synthase, RsuA/RluA VM_06610 IPR000462 CDP-alcohol phosphatidyltransferase VM_06615 IPR003593 AAA+ ATPase domain VM_06615 IPR017871 ABC transporter, conserved site VM_06615 IPR003439 ABC transporter-like VM_06615 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_06620 IPR035906 MetI-like superfamily VM_06620 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VM_06625 IPR006059 Bacterial extracellular solute-binding protein VM_06625 IPR027020 Protein ynjB VM_06635 IPR010710 Protein of unknown function DUF1289 VM_06645 IPR000412 ABC-2 transporter VM_06650 IPR003593 AAA+ ATPase domain VM_06650 IPR003439 ABC transporter-like VM_06650 IPR017871 ABC transporter, conserved site VM_06650 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_06655 IPR022936 Uncharacterised protein family UPF0194, membrane protein YbhG VM_06655 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VM_06660 IPR004694 Hydroxy amino acid transporter VM_06660 IPR018227 Amino acid/polyamine transporter 2 VM_06670 IPR000644 CBS domain VM_06670 IPR006668 Magnesium transporter, MgtE intracellular domain VM_06670 IPR038076 MgtE, N-terminal domain superfamily VM_06670 IPR006669 Magnesium transporter MgtE VM_06670 IPR006667 SLC41 divalent cation transporters, integral membrane domain VM_06670 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily VM_06670 IPR038048 Magnesium transporter MgtE, transmembrane domain VM_06675 IPR001789 Signal transduction response regulator, receiver domain VM_06675 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal VM_06675 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_06675 IPR038388 RcsC, C-terminal domain superfamily VM_06675 IPR030856 Sensor histidine kinase RcsC VM_06675 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VM_06675 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VM_06675 IPR005467 Histidine kinase domain VM_06675 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VM_06675 IPR003594 Histidine kinase/HSP90-like ATPase VM_06675 IPR011006 CheY-like superfamily VM_06680 IPR000160 GGDEF domain VM_06680 IPR001633 EAL domain VM_06680 IPR005330 MHYT domain VM_06680 IPR029787 Nucleotide cyclase VM_06680 IPR035919 EAL domain superfamily VM_06690 IPR007280 Peptidase, C-terminal, archaeal/bacterial VM_06690 IPR002169 Peptidase M9A/M9B, collagenase, bacterial VM_06690 IPR013661 Peptidase M9, collagenase, N-terminal domain VM_06700 IPR039424 Solute-binding protein family 5 VM_06700 IPR023767 Transcriptional regulator SgrR VM_06700 IPR036390 Winged helix DNA-binding domain superfamily VM_06700 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain VM_06700 IPR000914 Solute-binding protein family 5 domain VM_06710 IPR023943 Enolase-phosphatase E1 VM_06710 IPR036412 HAD-like superfamily VM_06710 IPR006439 HAD hydrolase, subfamily IA VM_06710 IPR023214 HAD superfamily VM_06720 IPR004090 Chemotaxis methyl-accepting receptor VM_06720 IPR003660 HAMP domain VM_06720 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_06730 IPR011004 Trimeric LpxA-like superfamily VM_06730 IPR018357 Hexapeptide transferase, conserved site VM_06730 IPR001451 Hexapeptide repeat VM_06740 IPR001036 Acriflavin resistance protein VM_06740 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VM_06745 IPR006143 RND efflux pump, membrane fusion protein VM_06745 IPR022824 Multidrug resistance protein MdtA VM_06745 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VM_06755 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal VM_06755 IPR029751 Ribosomal protein L25 VM_06755 IPR020055 Ribosomal protein L25, short-form VM_06755 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily VM_06765 IPR001867 OmpR/PhoB-type DNA-binding domain VM_06765 IPR036388 Winged helix-like DNA-binding domain superfamily VM_06765 IPR039420 Transcriptional regulatory protein WalR-like VM_06765 IPR001789 Signal transduction response regulator, receiver domain VM_06765 IPR011006 CheY-like superfamily VM_06775 IPR014001 Helicase superfamily 1/2, ATP-binding domain VM_06775 IPR001650 Helicase, C-terminal VM_06775 IPR006935 Helicase/UvrB, N-terminal VM_06775 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_06775 IPR011332 Zinc-binding ribosomal protein VM_06780 IPR036986 RNA-binding S4 domain superfamily VM_06780 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F VM_06780 IPR006145 Pseudouridine synthase, RsuA/RluA VM_06780 IPR002942 RNA-binding S4 domain VM_06780 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site VM_06780 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain VM_06780 IPR020103 Pseudouridine synthase, catalytic domain superfamily VM_06795 IPR016040 NAD(P)-binding domain VM_06795 IPR021295 Protein of unknown function DUF2867 VM_06795 IPR036291 NAD(P)-binding domain superfamily VM_06800 IPR002528 Multi antimicrobial extrusion protein VM_06805 IPR003593 AAA+ ATPase domain VM_06805 IPR003439 ABC transporter-like VM_06805 IPR017871 ABC transporter, conserved site VM_06805 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_06820 IPR004670 Na+/H+ antiporter NhaA VM_06820 IPR023171 Na/H antiporter domain superfamily VM_06825 IPR036515 Transposase IS200-like superfamily VM_06825 IPR002686 Transposase IS200-like VM_06830 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VM_06830 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VM_06830 IPR005814 Aminotransferase class-III VM_06830 IPR004637 2,4-diaminobutyrate 4-transaminase VM_06830 IPR015424 Pyridoxal phosphate-dependent transferase VM_06835 IPR032095 Saccharopine dehydrogenase, C-terminal VM_06835 IPR005097 Saccharopine dehydrogenase, NADP binding domain VM_06835 IPR036291 NAD(P)-binding domain superfamily VM_06840 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal VM_06840 IPR005730 Carboxynorspermidine decarboxylase VM_06840 IPR029066 PLP-binding barrel VM_06845 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VM_06845 IPR006665 OmpA-like domain VM_06845 IPR006690 Outer membrane protein, OmpA-like, conserved site VM_06845 IPR036737 OmpA-like domain superfamily VM_06845 IPR008722 Outer membrane porin F, N-terminal VM_06845 IPR028974 TSP type-3 repeat VM_06845 IPR006664 Outer membrane protein, bacterial VM_06850 IPR010130 Type I secretion outer membrane protein, TolC VM_06850 IPR003423 Outer membrane efflux protein VM_06860 IPR014735 Transposase, Tn5-like, N-terminal VM_06860 IPR014736 Transposase, Tn5-like, core VM_06860 IPR003201 Transposase Tn5, dimerisation VM_06860 IPR002559 Transposase, IS4-like VM_06860 IPR014737 Transposase, Tn5-like, C-terminal VM_06860 IPR038215 Transposase, Tn5-like, N-terminal domain superfamily VM_06860 IPR012337 Ribonuclease H-like superfamily VM_06875 IPR036390 Winged helix DNA-binding domain superfamily VM_06875 IPR036388 Winged helix-like DNA-binding domain superfamily VM_06875 IPR000847 Transcription regulator HTH, LysR VM_06875 IPR005119 LysR, substrate-binding VM_06885 IPR002725 Protein of unknown function DUF45 VM_06890 IPR010286 METTL16/RlmF family VM_06890 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VM_06890 IPR016909 Ribosomal RNA large subunit methyltransferase F VM_06900 IPR011990 Tetratricopeptide-like helical domain superfamily VM_06900 IPR013026 Tetratricopeptide repeat-containing domain VM_06900 IPR013360 Pilus biogenesis/stability type IV, PilW VM_06900 IPR019734 Tetratricopeptide repeat VM_06905 IPR029062 Class I glutamine amidotransferase-like VM_06905 IPR005697 Homoserine O-succinyltransferase MetA VM_06905 IPR033752 MetA family VM_06925 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VM_06940 IPR033463 Single cache domain 3 VM_06940 IPR000014 PAS domain VM_06940 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB VM_06940 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VM_06940 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_06940 IPR039506 SpoOB, alpha-helical domain VM_06940 IPR005467 Histidine kinase domain VM_06940 IPR029151 Periplasmic sensor-like domain superfamily VM_06940 IPR003594 Histidine kinase/HSP90-like ATPase VM_06940 IPR035965 PAS domain superfamily VM_06940 IPR013767 PAS fold VM_06945 IPR036388 Winged helix-like DNA-binding domain superfamily VM_06945 IPR036390 Winged helix DNA-binding domain superfamily VM_06945 IPR001789 Signal transduction response regulator, receiver domain VM_06945 IPR011006 CheY-like superfamily VM_06945 IPR024187 Signal transduction response regulator, citrate/malate metabolism VM_06955 IPR001789 Signal transduction response regulator, receiver domain VM_06955 IPR036061 CheW-like domain superfamily VM_06955 IPR024181 Chemotaxis response regulator CheV VM_06955 IPR011006 CheY-like superfamily VM_06955 IPR002545 CheW-like domain VM_06970 IPR011006 CheY-like superfamily VM_06970 IPR000160 GGDEF domain VM_06970 IPR029787 Nucleotide cyclase VM_06970 IPR001789 Signal transduction response regulator, receiver domain VM_06985 IPR020846 Major facilitator superfamily domain VM_06985 IPR036390 Winged helix DNA-binding domain superfamily VM_06985 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG VM_06985 IPR011701 Major facilitator superfamily VM_06985 IPR036388 Winged helix-like DNA-binding domain superfamily VM_06985 IPR005829 Sugar transporter, conserved site VM_06985 IPR036259 MFS transporter superfamily VM_06990 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal VM_06990 IPR001937 Galactose-1-phosphate uridyl transferase, class I VM_06990 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal VM_06990 IPR036265 HIT-like superfamily VM_06990 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site VM_06995 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VM_06995 IPR020568 Ribosomal protein S5 domain 2-type fold VM_06995 IPR006206 Mevalonate/galactokinase VM_06995 IPR013750 GHMP kinase, C-terminal domain VM_06995 IPR006204 GHMP kinase N-terminal domain VM_06995 IPR036554 GHMP kinase, C-terminal domain superfamily VM_06995 IPR019539 Galactokinase galactose-binding domain VM_06995 IPR019741 Galactokinase, conserved site VM_06995 IPR022963 Galactokinase, bacterial VM_06995 IPR006203 GHMP kinase, ATP-binding, conserved site VM_06995 IPR000705 Galactokinase VM_07000 IPR014718 Glycoside hydrolase-type carbohydrate-binding VM_07000 IPR018052 Aldose 1-epimerase, conserved site VM_07000 IPR011013 Galactose mutarotase-like domain superfamily VM_07000 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase VM_07000 IPR015443 Aldose 1-epimerase VM_07000 IPR013458 Aldose 1-epimerase, bacterial VM_07010 IPR035423 M60-like domain, N-terminal VM_07010 IPR042279 Peptidase M60, enhancin-like domain 3 VM_07010 IPR025385 Domain of unknown function DUF4092 VM_07010 IPR031161 Peptidase family M60 domain VM_07015 IPR007339 Inner membrane protein RclC-like VM_07015 IPR016865 Inner membrane protein RclC VM_07020 IPR011614 Catalase core domain VM_07020 IPR002226 Catalase haem-binding site VM_07020 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 VM_07020 IPR010582 Catalase immune-responsive domain VM_07020 IPR020835 Catalase superfamily VM_07020 IPR037060 Catalase core domain superfamily VM_07020 IPR024708 Catalase active site VM_07020 IPR018028 Catalase, mono-functional, haem-containing VM_07030 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily VM_07030 IPR018152 Superoxide dismutase, copper/zinc, binding site VM_07030 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone VM_07030 IPR001424 Superoxide dismutase, copper/zinc binding domain VM_07055 IPR020557 Fumarate lyase, conserved site VM_07055 IPR022761 Fumarate lyase, N-terminal VM_07055 IPR008948 L-Aspartase-like VM_07055 IPR018951 Fumarase C, C-terminal VM_07055 IPR024083 Fumarase/histidase, N-terminal VM_07055 IPR005677 Fumarate hydratase, class II VM_07055 IPR000362 Fumarate lyase family VM_07065 IPR016092 FeS cluster insertion protein VM_07065 IPR011298 FeS assembly scaffold SufA VM_07065 IPR035903 HesB-like domain superfamily VM_07065 IPR000361 FeS cluster biogenesis VM_07065 IPR017870 FeS cluster insertion, C-terminal, conserved site VM_07070 IPR000825 SUF system FeS cluster assembly, SufBD VM_07070 IPR010231 SUF system FeS cluster assembly, SufB VM_07070 IPR037284 SUF system FeS cluster assembly, SufBD superfamily VM_07075 IPR010230 FeS cluster assembly SUF system, ATPase SufC VM_07075 IPR017871 ABC transporter, conserved site VM_07075 IPR003439 ABC transporter-like VM_07075 IPR003593 AAA+ ATPase domain VM_07075 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_07080 IPR000825 SUF system FeS cluster assembly, SufBD VM_07080 IPR037284 SUF system FeS cluster assembly, SufBD superfamily VM_07080 IPR011542 SUF system FeS cluster assembly, SufD VM_07085 IPR010970 Cysteine desulfurase, SufS VM_07085 IPR016454 Cysteine desulfurase VM_07085 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VM_07085 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VM_07085 IPR000192 Aminotransferase class V domain VM_07085 IPR015424 Pyridoxal phosphate-dependent transferase VM_07085 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VM_07090 IPR023939 Cysteine desulfuration protein SufE VM_07090 IPR003808 Fe-S metabolism associated domain, SufE-like VM_07095 IPR011909 Glutaredoxin-like protein NrdH VM_07095 IPR002109 Glutaredoxin VM_07095 IPR036249 Thioredoxin-like superfamily VM_07100 IPR004465 Ribonucleotide reductase Class Ib, NrdI VM_07100 IPR029039 Flavoprotein-like superfamily VM_07100 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial VM_07105 IPR039718 Ribonucleoside-diphosphate reductase large subunit VM_07105 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal VM_07105 IPR013554 Ribonucleotide reductase N-terminal VM_07105 IPR013509 Ribonucleotide reductase large subunit, N-terminal VM_07105 IPR000788 Ribonucleotide reductase large subunit, C-terminal VM_07105 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE VM_07105 IPR013346 Ribonucleotide reductase, class I , alpha subunit VM_07110 IPR012348 Ribonucleotide reductase-like VM_07110 IPR026494 Ribonucleoside reductase subunit beta, NrdF VM_07110 IPR033909 Ribonucleotide reductase small subunit VM_07110 IPR009078 Ferritin-like superfamily VM_07110 IPR000358 Ribonucleotide reductase small subunit family VM_07110 IPR030475 Ribonucleotide reductase small subunit, acitve site VM_07115 IPR003593 AAA+ ATPase domain VM_07115 IPR017871 ABC transporter, conserved site VM_07115 IPR003439 ABC transporter-like VM_07115 IPR017911 ABC transporter, macrolide export, ATP-binding domain VM_07115 IPR025857 MacB-like periplasmic core domain VM_07115 IPR003838 ABC transporter permease protein domain VM_07115 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_07120 IPR017871 ABC transporter, conserved site VM_07120 IPR017911 ABC transporter, macrolide export, ATP-binding domain VM_07120 IPR025857 MacB-like periplasmic core domain VM_07120 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_07120 IPR003439 ABC transporter-like VM_07120 IPR003838 ABC transporter permease protein domain VM_07120 IPR003593 AAA+ ATPase domain VM_07125 IPR005085 Carbohydrate binding module family 25 VM_07125 IPR003838 ABC transporter permease protein domain VM_07125 IPR025857 MacB-like periplasmic core domain VM_07145 IPR037417 HTH-type transcriptional regulator SyrM, PBP2 domain VM_07145 IPR005119 LysR, substrate-binding VM_07145 IPR000847 Transcription regulator HTH, LysR VM_07145 IPR036388 Winged helix-like DNA-binding domain superfamily VM_07145 IPR036390 Winged helix DNA-binding domain superfamily VM_07150 IPR019794 Peroxidase, active site VM_07150 IPR010255 Haem peroxidase superfamily VM_07150 IPR002016 Haem peroxidase VM_07150 IPR000763 Catalase-peroxidase haem VM_07155 IPR017853 Glycoside hydrolase superfamily VM_07155 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site VM_07155 IPR018120 Glycoside hydrolase family 1, active site VM_07155 IPR001360 Glycoside hydrolase family 1 VM_07160 IPR000843 LacI-type HTH domain VM_07160 IPR028082 Periplasmic binding protein-like I VM_07160 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VM_07165 IPR035709 RutC family, YoaB-like VM_07165 IPR035959 RutC-like superfamily VM_07165 IPR006175 YjgF/YER057c/UK114 family VM_07165 IPR019897 RidA, conserved site VM_07170 IPR037012 YhcH/YjgK/YiaL superfamily VM_07170 IPR004375 YhcH/YjgK/YiaL family VM_07175 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily VM_07175 IPR030395 Glycerophosphodiester phosphodiesterase domain VM_07180 IPR001034 DeoR-type HTH domain VM_07180 IPR036390 Winged helix DNA-binding domain superfamily VM_07180 IPR014036 DeoR C-terminal sensor domain VM_07180 IPR037171 NagB/RpiA transferase-like VM_07180 IPR036388 Winged helix-like DNA-binding domain superfamily VM_07180 IPR018356 Transcription regulator, HTH DeoR-type, conserved site VM_07185 IPR017871 ABC transporter, conserved site VM_07185 IPR003439 ABC transporter-like VM_07185 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_07185 IPR040582 MalK, OB fold domain VM_07185 IPR008995 Molybdate/tungstate binding, C-terminal VM_07185 IPR017922 sn-Glycerol-3-phosphate import ATP-binding protein UgpC VM_07185 IPR003593 AAA+ ATPase domain VM_07190 IPR035906 MetI-like superfamily VM_07190 IPR030165 sn-Glycerol-3-phosphate transport system permease protein UgpE VM_07190 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VM_07195 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VM_07195 IPR035906 MetI-like superfamily VM_07200 IPR006059 Bacterial extracellular solute-binding protein VM_07200 IPR006061 Solute-binding family 1, conserved site VM_07215 IPR002898 MotA/TolQ/ExbB proton channel VM_07220 IPR002898 MotA/TolQ/ExbB proton channel VM_07225 IPR003400 Biopolymer transport protein ExbD/TolR VM_07240 IPR012310 DNA ligase, ATP-dependent, central VM_07240 IPR016059 DNA ligase, ATP-dependent, conserved site VM_07240 IPR012340 Nucleic acid-binding, OB-fold VM_07240 IPR029319 DNA ligase, OB-like domain VM_07250 IPR002528 Multi antimicrobial extrusion protein VM_07270 IPR038765 Papain-like cysteine peptidase superfamily VM_07270 IPR000064 Endopeptidase, NLPC/P60 domain VM_07275 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain VM_07275 IPR004090 Chemotaxis methyl-accepting receptor VM_07275 IPR000727 Target SNARE coiled-coil homology domain VM_07275 IPR003660 HAMP domain VM_07275 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_07290 IPR000600 ROK family VM_07290 IPR023505 N-acetyl-D-glucosamine kinase VM_07300 IPR005111 MoeA, C-terminal, domain IV VM_07300 IPR036425 MoaB/Mog-like domain superfamily VM_07300 IPR001453 MoaB/Mog domain VM_07300 IPR008284 Molybdenum cofactor biosynthesis, conserved site VM_07300 IPR038987 Molybdopterin biosynthesis protein MoeA-like VM_07300 IPR036688 MoeA, C-terminal, domain IV superfamily VM_07300 IPR005110 MoeA, N-terminal and linker domain VM_07300 IPR036135 MoeA, N-terminal and linker domain superfamily VM_07305 IPR025877 MobA-like NTP transferase VM_07305 IPR013482 Molybdenum cofactor guanylyltransferase VM_07305 IPR029044 Nucleotide-diphospho-sugar transferases VM_07310 IPR013611 Transport-associated OB, type 2 VM_07310 IPR017871 ABC transporter, conserved site VM_07310 IPR015853 ABC transporter, ferric cation import, FbpC VM_07310 IPR008995 Molybdate/tungstate binding, C-terminal VM_07310 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_07310 IPR003593 AAA+ ATPase domain VM_07310 IPR003439 ABC transporter-like VM_07315 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VM_07315 IPR035906 MetI-like superfamily VM_07320 IPR024370 PBP domain VM_07325 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VM_07325 IPR009057 Homeobox-like domain superfamily VM_07325 IPR025944 Sigma-54 interaction domain, conserved site VM_07325 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VM_07325 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_07325 IPR003593 AAA+ ATPase domain VM_07325 IPR001789 Signal transduction response regulator, receiver domain VM_07325 IPR002078 RNA polymerase sigma factor 54 interaction domain VM_07325 IPR011006 CheY-like superfamily VM_07325 IPR002197 DNA binding HTH domain, Fis-type VM_07330 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_07330 IPR003594 Histidine kinase/HSP90-like ATPase VM_07330 IPR003660 HAMP domain VM_07330 IPR000700 PAS-associated, C-terminal VM_07330 IPR035965 PAS domain superfamily VM_07330 IPR013767 PAS fold VM_07330 IPR005467 Histidine kinase domain VM_07330 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VM_07330 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VM_07330 IPR000014 PAS domain VM_07330 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VM_07335 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_07335 IPR003593 AAA+ ATPase domain VM_07335 IPR032781 ABC-transporter extension domain VM_07335 IPR003439 ABC transporter-like VM_07340 IPR003660 HAMP domain VM_07340 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_07340 IPR033479 Double Cache domain 1 VM_07340 IPR029151 Periplasmic sensor-like domain superfamily VM_07345 IPR016193 Cytidine deaminase-like VM_07345 IPR003786 Sulfur carrier protein FdhD VM_07365 IPR036411 TorD-like superfamily VM_07365 IPR020945 DMSO/Nitrate reductase chaperone VM_07365 IPR023069 Chaperone TorD VM_07365 IPR036386 HscB, C-terminal domain superfamily VM_07375 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site VM_07375 IPR006443 Formate dehydrogenase-N, alpha subunit VM_07375 IPR006657 Molybdopterin dinucleotide-binding domain VM_07375 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain VM_07375 IPR009010 Aspartate decarboxylase-like domain superfamily VM_07375 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site VM_07375 IPR006311 Twin-arginine translocation pathway, signal sequence VM_07375 IPR006656 Molybdopterin oxidoreductase VM_07380 IPR000813 7Fe ferredoxin VM_07380 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VM_07380 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VM_07395 IPR029020 Ammonium/urea transporter VM_07395 IPR001905 Ammonium transporter VM_07395 IPR018047 Ammonium transporter, conserved site VM_07395 IPR024041 Ammonium transporter AmtB-like domain VM_07400 IPR026590 Sirtuin family, catalytic core domain VM_07400 IPR026591 Sirtuin, catalytic core small domain superfamily VM_07400 IPR003000 Sirtuin family VM_07400 IPR029035 DHS-like NAD/FAD-binding domain superfamily VM_07400 IPR027546 Sirtuin, class III VM_07405 IPR035570 UPF0234, N-terminal VM_07405 IPR035571 UPF0234-like, C-terminal VM_07405 IPR036183 YajQ-like superfamily VM_07405 IPR007551 Protein of unknown function DUF520 VM_07410 IPR006218 DAHP synthetase I/KDSA VM_07410 IPR013785 Aldolase-type TIM barrel VM_07410 IPR006219 DHAP synthase, class 1 VM_07425 IPR036388 Winged helix-like DNA-binding domain superfamily VM_07425 IPR014464 Conserved virulence factor B VM_07425 IPR039566 Conserved virulence factor B, S1 domain VM_07425 IPR040764 Conserved virulence factor B-like, winged helix domain VM_07425 IPR012340 Nucleic acid-binding, OB-fold VM_07425 IPR022967 RNA-binding domain, S1 VM_07425 IPR003029 S1 domain VM_07430 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site VM_07430 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal VM_07430 IPR023267 RNA (C5-cytosine) methyltransferase VM_07430 IPR011023 Nop2p VM_07430 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain VM_07430 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type VM_07430 IPR023545 rRNA small subunit methyltransferase F VM_07430 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VM_07435 IPR003399 Mce/MlaD VM_07440 IPR011031 Multihaem cytochrome VM_07440 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type VM_07440 IPR007498 Intermembrane transport protein PqiA-like VM_07445 IPR011917 ABC transporter, lipid A export, MsbA VM_07445 IPR036640 ABC transporter type 1, transmembrane domain superfamily VM_07445 IPR011527 ABC transporter type 1, transmembrane domain VM_07445 IPR003439 ABC transporter-like VM_07445 IPR003593 AAA+ ATPase domain VM_07445 IPR017871 ABC transporter, conserved site VM_07445 IPR039421 Type I protein exporter VM_07445 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_07450 IPR003018 GAF domain VM_07450 IPR029016 GAF-like domain superfamily VM_07450 IPR000614 Free Met sulfoxide reductase conserved site VM_07455 IPR016103 ProQ/FinO domain VM_07455 IPR035236 RNA chaperone ProQ, C-terminal VM_07455 IPR036442 ProQ/FinO domain superfamily VM_07455 IPR023529 RNA chaperone ProQ VM_07460 IPR004447 C-terminal-processing peptidase S41A VM_07460 IPR040573 Tail specific protease, N-terminal domain VM_07460 IPR001478 PDZ domain VM_07460 IPR036034 PDZ superfamily VM_07460 IPR029045 ClpP/crotonase-like domain superfamily VM_07460 IPR020992 Tail specific protease, C-terminal VM_07460 IPR005151 Tail specific protease VM_07470 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold VM_07470 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily VM_07470 IPR042097 Aminopeptidase N-like , N-terminal VM_07470 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase VM_07470 IPR027268 Peptidase M4/M1, CTD superfamily VM_07470 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal VM_07470 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily VM_07470 IPR012779 Peptidase M1, alanyl aminopeptidase VM_07470 IPR014782 Peptidase M1, membrane alanine aminopeptidase VM_07480 IPR007780 NAD-glutamate dehydrogenase, bacteria VM_07480 IPR036291 NAD(P)-binding domain superfamily VM_07480 IPR028971 NAD-glutamate dehydrogenase VM_07485 IPR005720 Dihydroorotate dehydrogenase domain VM_07485 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 VM_07485 IPR005719 Dihydroorotate dehydrogenase, class 2 VM_07485 IPR001295 Dihydroorotate dehydrogenase, conserved site VM_07485 IPR013785 Aldolase-type TIM barrel VM_07490 IPR009809 Cell division protein ZapC VM_07495 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VM_07495 IPR004114 THUMP domain VM_07495 IPR002052 DNA methylase, N-6 adenine-specific, conserved site VM_07495 IPR017244 Ribosomal RNA large subunit methyltransferase K/L VM_07495 IPR000241 Putative RNA methylase domain VM_07495 IPR019614 S-adenosylmethionine-dependent methyltransferase VM_07515 IPR007040 Ribosome modulation factor VM_07515 IPR023200 Ribosome modulation factor domain superfamily VM_07520 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ VM_07520 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA VM_07520 IPR029069 HotDog domain superfamily VM_07525 IPR008269 Peptidase S16, Lon proteolytic domain VM_07525 IPR027065 Lon protease VM_07525 IPR041699 Lon protease, AAA domain VM_07525 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VM_07525 IPR020568 Ribosomal protein S5 domain 2-type fold VM_07530 IPR013321 Arc-type ribbon-helix-helix VM_07530 IPR009390 Macrodomain Ter protein, MatP VM_07530 IPR035375 MatP, C-terminal ribbon-helix-helix domain VM_07530 IPR035087 MatP, N-terminal VM_07530 IPR038339 MatP, N-terminal domain superfamily VM_07545 IPR029151 Periplasmic sensor-like domain superfamily VM_07545 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_07545 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VM_07545 IPR001789 Signal transduction response regulator, receiver domain VM_07545 IPR015387 LuxQ, periplasmic VM_07545 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VM_07545 IPR005467 Histidine kinase domain VM_07545 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VM_07545 IPR003594 Histidine kinase/HSP90-like ATPase VM_07545 IPR011006 CheY-like superfamily VM_07560 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site VM_07560 IPR036927 Cytochrome c oxidase-like, subunit I superfamily VM_07560 IPR000883 Cytochrome c oxidase subunit I VM_07560 IPR004677 Cytochrome c oxidase cbb3-type, subunit I VM_07560 IPR023616 Cytochrome c oxidase-like, subunit I domain VM_07575 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal VM_07575 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily VM_07575 IPR009056 Cytochrome c-like domain VM_07575 IPR036909 Cytochrome c-like domain superfamily VM_07575 IPR008168 Cytochrome c, class IC VM_07575 IPR004678 Cytochrome c oxidase cbb3-type, subunit III VM_07585 IPR023299 P-type ATPase, cytoplasmic domain N VM_07585 IPR018303 P-type ATPase, phosphorylation site VM_07585 IPR017969 Heavy-metal-associated, conserved site VM_07585 IPR008250 P-type ATPase, A domain superfamily VM_07585 IPR036412 HAD-like superfamily VM_07585 IPR023214 HAD superfamily VM_07585 IPR006121 Heavy metal-associated domain, HMA VM_07585 IPR036163 Heavy metal-associated domain superfamily VM_07585 IPR027256 P-type ATPase, subfamily IB VM_07585 IPR001757 P-type ATPase VM_07585 IPR023298 P-type ATPase, transmembrane domain superfamily VM_07600 IPR036390 Winged helix DNA-binding domain superfamily VM_07600 IPR036388 Winged helix-like DNA-binding domain superfamily VM_07600 IPR012318 Crp-type HTH domain VM_07600 IPR018335 Transcription regulator HTH, Crp-type, conserved site VM_07600 IPR014710 RmlC-like jelly roll fold VM_07600 IPR000595 Cyclic nucleotide-binding domain VM_07600 IPR018490 Cyclic nucleotide-binding-like VM_07605 IPR006016 UspA VM_07610 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_07610 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal VM_07610 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase VM_07610 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type VM_07630 IPR003593 AAA+ ATPase domain VM_07630 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA VM_07630 IPR003439 ABC transporter-like VM_07630 IPR008995 Molybdate/tungstate binding, C-terminal VM_07630 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit VM_07630 IPR013611 Transport-associated OB, type 2 VM_07630 IPR017871 ABC transporter, conserved site VM_07630 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_07635 IPR035906 MetI-like superfamily VM_07635 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VM_07640 IPR035906 MetI-like superfamily VM_07640 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VM_07645 IPR006059 Bacterial extracellular solute-binding protein VM_07645 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein VM_07650 IPR006059 Bacterial extracellular solute-binding protein VM_07650 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein VM_07655 IPR015590 Aldehyde dehydrogenase domain VM_07655 IPR016162 Aldehyde dehydrogenase, N-terminal VM_07655 IPR016161 Aldehyde/histidinol dehydrogenase VM_07655 IPR016163 Aldehyde dehydrogenase, C-terminal VM_07655 IPR016160 Aldehyde dehydrogenase, cysteine active site VM_07655 IPR029510 Aldehyde dehydrogenase, glutamic acid active site VM_07660 IPR011006 CheY-like superfamily VM_07660 IPR001789 Signal transduction response regulator, receiver domain VM_07660 IPR000792 Transcription regulator LuxR, C-terminal VM_07660 IPR016032 Signal transduction response regulator, C-terminal effector VM_07670 IPR013767 PAS fold VM_07670 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VM_07670 IPR005467 Histidine kinase domain VM_07670 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VM_07670 IPR003594 Histidine kinase/HSP90-like ATPase VM_07670 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VM_07670 IPR000014 PAS domain VM_07670 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_07670 IPR035965 PAS domain superfamily VM_07675 IPR000160 GGDEF domain VM_07675 IPR033420 Gammaproteobacterial periplasmic sensor domain GAPES1 VM_07675 IPR029787 Nucleotide cyclase VM_07690 IPR001463 Sodium:alanine symporter VM_07695 IPR001123 Amino acid exporter protein, LeuE-type VM_07715 IPR037026 Vgr protein, OB-fold domain superfamily VM_07715 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein VM_07715 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset VM_07715 IPR006531 Gp5 N-terminal VM_07715 IPR032074 Actin cross-linking domain VM_07720 IPR036624 Hcp1-like superfamily VM_07720 IPR008514 Type VI secretion system effector, Hcp VM_07725 IPR001333 Peptidase M32, carboxypeptidase Taq VM_07730 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily VM_07730 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain VM_07730 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal VM_07730 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily VM_07740 IPR015590 Aldehyde dehydrogenase domain VM_07740 IPR010102 Succinate semialdehyde dehydrogenase VM_07740 IPR016162 Aldehyde dehydrogenase, N-terminal VM_07740 IPR029510 Aldehyde dehydrogenase, glutamic acid active site VM_07740 IPR016163 Aldehyde dehydrogenase, C-terminal VM_07740 IPR016160 Aldehyde dehydrogenase, cysteine active site VM_07740 IPR016161 Aldehyde/histidinol dehydrogenase VM_07745 IPR011984 3,4-dihydroxyphenylacetate 2,3-dioxygenase VM_07745 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B VM_07760 IPR011985 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase VM_07760 IPR016163 Aldehyde dehydrogenase, C-terminal VM_07760 IPR016160 Aldehyde dehydrogenase, cysteine active site VM_07760 IPR015590 Aldehyde dehydrogenase domain VM_07760 IPR016162 Aldehyde dehydrogenase, N-terminal VM_07760 IPR029510 Aldehyde dehydrogenase, glutamic acid active site VM_07760 IPR016161 Aldehyde/histidinol dehydrogenase VM_07765 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily VM_07765 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit VM_07765 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit VM_07765 IPR011234 Fumarylacetoacetase-like, C-terminal VM_07770 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily VM_07770 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit VM_07770 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit VM_07770 IPR011234 Fumarylacetoacetase-like, C-terminal VM_07775 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase VM_07775 IPR005000 HpcH/HpaI aldolase/citrate lyase domain VM_07775 IPR023701 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase, Enterobacteriales VM_07775 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily VM_07775 IPR040442 Pyruvate kinase-like domain superfamily VM_07780 IPR012690 2-oxo-hepta-4-ene-1,7-dioic acid hydratase VM_07780 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily VM_07780 IPR011234 Fumarylacetoacetase-like, C-terminal VM_07795 IPR004681 TRAP transporter large membrane protein DctM VM_07795 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VM_07800 IPR036390 Winged helix DNA-binding domain superfamily VM_07800 IPR012712 HTH-type transcriptional regulator HpaR/FarR VM_07800 IPR000835 MarR-type HTH domain VM_07800 IPR023187 Transcriptional regulator MarR-type, conserved site VM_07800 IPR036388 Winged helix-like DNA-binding domain superfamily VM_07805 IPR011982 4-hydroxyphenylacetate 3-monooxygenase, reductase component VM_07805 IPR002563 Flavin reductase like domain VM_07805 IPR012349 FMN-binding split barrel VM_07815 IPR029510 Aldehyde dehydrogenase, glutamic acid active site VM_07815 IPR015590 Aldehyde dehydrogenase domain VM_07815 IPR016163 Aldehyde dehydrogenase, C-terminal VM_07815 IPR016162 Aldehyde dehydrogenase, N-terminal VM_07815 IPR016161 Aldehyde/histidinol dehydrogenase VM_07815 IPR016160 Aldehyde dehydrogenase, cysteine active site VM_07830 IPR005064 Bordetella uptake gene VM_07830 IPR042100 Bordetella uptake gene, domain 1 VM_07835 IPR006015 Universal stress protein A family VM_07835 IPR006016 UspA VM_07840 IPR006278 Sarcosine oxidase subunit beta VM_07840 IPR036188 FAD/NAD(P)-binding domain superfamily VM_07840 IPR006076 FAD dependent oxidoreductase VM_07850 IPR023401 Ornithine cyclodeaminase, N-terminal VM_07850 IPR003462 Ornithine cyclodeaminase/mu-crystallin VM_07850 IPR036291 NAD(P)-binding domain superfamily VM_07860 IPR028622 ATP-dependent RNA helicase RhlE VM_07860 IPR014001 Helicase superfamily 1/2, ATP-binding domain VM_07860 IPR001650 Helicase, C-terminal VM_07860 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VM_07860 IPR011545 DEAD/DEAH box helicase domain VM_07860 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_07860 IPR014014 RNA helicase, DEAD-box type, Q motif VM_07865 IPR001610 PAC motif VM_07865 IPR000700 PAS-associated, C-terminal VM_07865 IPR035965 PAS domain superfamily VM_07865 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_07865 IPR013655 PAS fold-3 VM_07865 IPR000014 PAS domain VM_07865 IPR004090 Chemotaxis methyl-accepting receptor VM_07870 IPR004090 Chemotaxis methyl-accepting receptor VM_07870 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site VM_07870 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily VM_07870 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_07870 IPR003660 HAMP domain VM_07870 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding VM_07875 IPR000390 Small multidrug resistance protein family VM_07880 IPR005829 Sugar transporter, conserved site VM_07880 IPR020846 Major facilitator superfamily domain VM_07880 IPR036259 MFS transporter superfamily VM_07880 IPR004638 Drug resistance transporter EmrB-like VM_07880 IPR011701 Major facilitator superfamily VM_07885 IPR036390 Winged helix DNA-binding domain superfamily VM_07885 IPR036388 Winged helix-like DNA-binding domain superfamily VM_07885 IPR005119 LysR, substrate-binding VM_07885 IPR000847 Transcription regulator HTH, LysR VM_07890 IPR018181 Heat shock protein 70, conserved site VM_07890 IPR013126 Heat shock protein 70 family VM_07890 IPR042054 YegD-like VM_07895 IPR032466 Metal-dependent hydrolase VM_07895 IPR023512 Deaminase MtaD/DadD VM_07895 IPR006680 Amidohydrolase-related VM_07895 IPR011059 Metal-dependent hydrolase, composite domain superfamily VM_07905 IPR040605 Glycoside hydrolase family 2, domain 5 VM_07905 IPR006101 Glycoside hydrolase, family 2 VM_07905 IPR017853 Glycoside hydrolase superfamily VM_07905 IPR006104 Glycosyl hydrolases family 2, sugar binding domain VM_07905 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich VM_07905 IPR023230 Glycoside hydrolase, family 2, conserved site VM_07905 IPR008979 Galactose-binding-like domain superfamily VM_07905 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily VM_07905 IPR013783 Immunoglobulin-like fold VM_07905 IPR023232 Glycoside hydrolase, family 2, active site VM_07905 IPR006103 Glycoside hydrolase family 2, catalytic domain VM_07910 IPR007140 Protein of unknown function DUF350 VM_07920 IPR016185 Pre-ATP-grasp domain superfamily VM_07920 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain VM_07930 IPR011545 DEAD/DEAH box helicase domain VM_07930 IPR011709 Domain of unknown function DUF1605 VM_07930 IPR010222 RNA helicase HrpA VM_07930 IPR007502 Helicase-associated domain VM_07930 IPR014001 Helicase superfamily 1/2, ATP-binding domain VM_07930 IPR001650 Helicase, C-terminal VM_07930 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_07930 IPR003593 AAA+ ATPase domain VM_07930 IPR024590 RNA helicase HrpA, C-terminal VM_07960 IPR001633 EAL domain VM_07960 IPR029787 Nucleotide cyclase VM_07960 IPR035919 EAL domain superfamily VM_07960 IPR000160 GGDEF domain VM_07960 IPR005330 MHYT domain VM_07960 IPR000014 PAS domain VM_07960 IPR035965 PAS domain superfamily VM_07975 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily VM_07975 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily VM_07975 IPR018181 Heat shock protein 70, conserved site VM_07975 IPR042039 HscA chaperone, nucleotide-binding domain VM_07975 IPR010236 ISC system FeS cluster assembly, HscA chaperone VM_07975 IPR013126 Heat shock protein 70 family VM_07980 IPR000160 GGDEF domain VM_07980 IPR033424 Membrane-associated sensor domain VM_07980 IPR029787 Nucleotide cyclase VM_07990 IPR029787 Nucleotide cyclase VM_07990 IPR005330 MHYT domain VM_07990 IPR001633 EAL domain VM_07990 IPR000160 GGDEF domain VM_07990 IPR035919 EAL domain superfamily VM_08010 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_08010 IPR018317 Queuosine biosynthesis protein QueC VM_08015 IPR024924 7-carboxy-7-deazaguanine synthase-like VM_08015 IPR013785 Aldolase-type TIM barrel VM_08015 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria VM_08015 IPR007197 Radical SAM VM_08020 IPR036412 HAD-like superfamily VM_08020 IPR023214 HAD superfamily VM_08020 IPR006379 HAD-superfamily hydrolase, subfamily IIB VM_08020 IPR000150 Cof family VM_08025 IPR019478 Sirohaem synthase, dimerisation domain VM_08025 IPR028281 Siroheme synthase, central domain VM_08025 IPR012409 Sirohaem synthase VM_08025 IPR014776 Tetrapyrrole methylase, subdomain 2 VM_08025 IPR036291 NAD(P)-binding domain superfamily VM_08025 IPR000878 Tetrapyrrole methylase VM_08025 IPR035996 Tetrapyrrole methylase superfamily VM_08025 IPR014777 Tetrapyrrole methylase, subdomain 1 VM_08025 IPR037115 Sirohaem synthase, dimerisation domain superfamily VM_08025 IPR006366 Uroporphyrin-III C-methyltransferase VM_08025 IPR006367 Sirohaem synthase, N-terminal VM_08025 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site VM_08030 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter VM_08030 IPR018313 Solute-binding protein family 3, conserved site VM_08030 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VM_08035 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VM_08035 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain VM_08035 IPR035906 MetI-like superfamily VM_08040 IPR035906 MetI-like superfamily VM_08040 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VM_08040 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain VM_08045 IPR017871 ABC transporter, conserved site VM_08045 IPR003439 ABC transporter-like VM_08045 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type VM_08045 IPR003593 AAA+ ATPase domain VM_08045 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_08050 IPR006214 Bax inhibitor 1-related VM_08055 IPR042072 DsrC-like protein, C-terminal domain VM_08055 IPR025526 DsrC-like domain superfamily VM_08055 IPR007453 Sulphur transfer protein DsrC/TusE VM_08060 IPR017968 Acylphosphatase, conserved site VM_08060 IPR036046 Acylphosphatase-like domain superfamily VM_08060 IPR001792 Acylphosphatase-like domain VM_08060 IPR020456 Acylphosphatase VM_08065 IPR003660 HAMP domain VM_08065 IPR004090 Chemotaxis methyl-accepting receptor VM_08065 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_08070 IPR015947 PUA-like superfamily VM_08070 IPR036974 PUA domain superfamily VM_08070 IPR041532 RlmI, PUA-like domain VM_08070 IPR002478 PUA domain VM_08070 IPR023542 rRNA large subunit methyltransferase I VM_08070 IPR019614 S-adenosylmethionine-dependent methyltransferase VM_08070 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VM_08075 IPR029787 Nucleotide cyclase VM_08075 IPR000160 GGDEF domain VM_08080 IPR013766 Thioredoxin domain VM_08080 IPR013740 Redoxin VM_08080 IPR037944 Peroxiredoxin-5-like VM_08080 IPR002109 Glutaredoxin VM_08080 IPR011767 Glutaredoxin active site VM_08080 IPR036249 Thioredoxin-like superfamily VM_08085 IPR036641 HPT domain superfamily VM_08085 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain VM_08085 IPR001789 Signal transduction response regulator, receiver domain VM_08085 IPR019247 Histidine kinase BarA, N-terminal VM_08085 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_08085 IPR003660 HAMP domain VM_08085 IPR003594 Histidine kinase/HSP90-like ATPase VM_08085 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VM_08085 IPR005467 Histidine kinase domain VM_08085 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VM_08085 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VM_08085 IPR011006 CheY-like superfamily VM_08090 IPR003607 HD/PDEase domain VM_08090 IPR011006 CheY-like superfamily VM_08090 IPR001789 Signal transduction response regulator, receiver domain VM_08090 IPR037522 HD-GYP domain VM_08095 IPR010987 Glutathione S-transferase, C-terminal-like VM_08095 IPR040079 Glutathione Transferase family VM_08095 IPR004045 Glutathione S-transferase, N-terminal VM_08095 IPR004046 Glutathione S-transferase, C-terminal VM_08095 IPR034330 Glutathione S-transferases, class Zeta , C-terminal VM_08095 IPR034333 Glutathione S-transferases, class Zeta , N-terminal VM_08095 IPR036249 Thioredoxin-like superfamily VM_08095 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VM_08095 IPR005955 Glutathione S-transferases, class Zeta VM_08105 IPR014710 RmlC-like jelly roll fold VM_08105 IPR005708 Homogentisate 1,2-dioxygenase VM_08105 IPR011051 RmlC-like cupin domain superfamily VM_08110 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VM_08110 IPR037523 Vicinal oxygen chelate (VOC) domain VM_08110 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VM_08110 IPR005956 4-hydroxyphenylpyruvate dioxygenase VM_08110 IPR041736 4-hydroxyphenylpyruvate dioxygenase, N-terminal VM_08110 IPR041735 4-hydroxyphenylpyruvate dioxygenase, C-terminal VM_08115 IPR011650 Peptidase M20, dimerisation domain VM_08115 IPR002933 Peptidase M20 VM_08115 IPR008007 Peptidase M42 VM_08115 IPR036264 Bacterial exopeptidase dimerisation domain VM_08115 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site VM_08115 IPR010162 Peptidase M20B, peptidase T-like VM_08130 IPR025110 AMP-binding enzyme, C-terminal domain VM_08130 IPR020845 AMP-binding, conserved site VM_08130 IPR000873 AMP-dependent synthetase/ligase VM_08130 IPR042099 AMP-dependent synthetase-like superfamily VM_08130 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain VM_08135 IPR012709 2-methyl-aconitate isomerase PrpF VM_08135 IPR007400 PrpF protein VM_08140 IPR006249 Aconitase/Iron-responsive element-binding protein 2 VM_08140 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VM_08140 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain VM_08140 IPR036008 Aconitase, iron-sulfur domain VM_08140 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent VM_08140 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain VM_08140 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 VM_08145 IPR024176 Citrate synthase, bacterial-type VM_08145 IPR036969 Citrate synthase superfamily VM_08145 IPR016142 Citrate synthase-like, large alpha subdomain VM_08145 IPR019810 Citrate synthase active site VM_08145 IPR002020 Citrate synthase VM_08145 IPR016143 Citrate synthase-like, small alpha subdomain VM_08145 IPR011278 2-methylcitrate synthase/citrate synthase type I VM_08150 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site VM_08150 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily VM_08150 IPR040442 Pyruvate kinase-like domain superfamily VM_08150 IPR039556 ICL/PEPM domain VM_08150 IPR012695 2-methylisocitrate lyase VM_08160 IPR003607 HD/PDEase domain VM_08160 IPR037522 HD-GYP domain VM_08175 IPR002823 Protein of unknown function DUF112, transmembrane VM_08180 IPR029787 Nucleotide cyclase VM_08180 IPR000160 GGDEF domain VM_08180 IPR011006 CheY-like superfamily VM_08180 IPR001789 Signal transduction response regulator, receiver domain VM_08185 IPR001851 ABC transporter, permease VM_08185 IPR030158 Galactoside transport system permease protein MglC VM_08190 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_08190 IPR015862 ABC transporter, galactose import, MglA VM_08190 IPR017871 ABC transporter, conserved site VM_08190 IPR003439 ABC transporter-like VM_08190 IPR003593 AAA+ ATPase domain VM_08195 IPR028082 Periplasmic binding protein-like I VM_08195 IPR025997 Periplasmic binding protein VM_08220 IPR001867 OmpR/PhoB-type DNA-binding domain VM_08220 IPR039420 Transcriptional regulatory protein WalR-like VM_08220 IPR036388 Winged helix-like DNA-binding domain superfamily VM_08220 IPR001789 Signal transduction response regulator, receiver domain VM_08220 IPR011006 CheY-like superfamily VM_08220 IPR016032 Signal transduction response regulator, C-terminal effector VM_08225 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_08225 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VM_08225 IPR003660 HAMP domain VM_08225 IPR003594 Histidine kinase/HSP90-like ATPase VM_08225 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VM_08225 IPR006290 Heavy metal sensor kinase VM_08225 IPR005467 Histidine kinase domain VM_08225 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VM_08230 IPR010583 MltA-interacting MipA VM_08240 IPR002078 RNA polymerase sigma factor 54 interaction domain VM_08240 IPR001789 Signal transduction response regulator, receiver domain VM_08240 IPR002197 DNA binding HTH domain, Fis-type VM_08240 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_08240 IPR011006 CheY-like superfamily VM_08240 IPR025944 Sigma-54 interaction domain, conserved site VM_08240 IPR009057 Homeobox-like domain superfamily VM_08245 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VM_08245 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_08245 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VM_08245 IPR005467 Histidine kinase domain VM_08245 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VM_08245 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VM_08245 IPR003594 Histidine kinase/HSP90-like ATPase VM_08250 IPR031312 Sodium/sulphate symporter, conserved site VM_08250 IPR001898 Solute carrier family 13 VM_08255 IPR004090 Chemotaxis methyl-accepting receptor VM_08255 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_08255 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain VM_08255 IPR003660 HAMP domain VM_08260 IPR011079 Alanine racemase, C-terminal VM_08260 IPR001608 Alanine racemase, N-terminal VM_08260 IPR029066 PLP-binding barrel VM_08260 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal VM_08260 IPR000821 Alanine racemase VM_08260 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site VM_08265 IPR000620 EamA domain VM_08270 IPR014736 Transposase, Tn5-like, core VM_08270 IPR002559 Transposase, IS4-like VM_08270 IPR012337 Ribonuclease H-like superfamily VM_08270 IPR038215 Transposase, Tn5-like, N-terminal domain superfamily VM_08270 IPR014735 Transposase, Tn5-like, N-terminal VM_08270 IPR014737 Transposase, Tn5-like, C-terminal VM_08270 IPR003201 Transposase Tn5, dimerisation VM_08285 IPR000182 GNAT domain VM_08285 IPR016181 Acyl-CoA N-acyltransferase VM_08290 IPR009057 Homeobox-like domain superfamily VM_08290 IPR002078 RNA polymerase sigma factor 54 interaction domain VM_08290 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VM_08290 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VM_08290 IPR003593 AAA+ ATPase domain VM_08290 IPR002912 ACT domain VM_08290 IPR035965 PAS domain superfamily VM_08290 IPR000014 PAS domain VM_08290 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_08290 IPR025944 Sigma-54 interaction domain, conserved site VM_08290 IPR030828 TyrR family, helix-turn-helix domain VM_08295 IPR006507 Uncharacterised protein family UPF0283 VM_08295 IPR021147 Protein of unknown function DUF697 VM_08300 IPR007413 Protein of unknown function DUF463, YcjX-like protein VM_08315 IPR015890 Chorismate-utilising enzyme, C-terminal VM_08315 IPR006805 Anthranilate synthase component I, N-terminal VM_08315 IPR005802 Aminodeoxychorismate synthase, component I VM_08315 IPR005801 ADC synthase VM_08315 IPR019999 Anthranilate synthase component I-like VM_08320 IPR015797 NUDIX hydrolase-like domain superfamily VM_08320 IPR000059 NUDIX hydrolase, NudL, conserved site VM_08320 IPR023735 Uncharacterised nudix hydrolase NudL VM_08320 IPR000086 NUDIX hydrolase domain VM_08325 IPR018227 Amino acid/polyamine transporter 2 VM_08325 IPR004694 Hydroxy amino acid transporter VM_08330 IPR029009 Allosteric substrate binding domain superfamily VM_08330 IPR005131 Serine dehydratase beta chain VM_08330 IPR005130 Serine dehydratase-like, alpha subunit VM_08330 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form VM_08335 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family VM_08335 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily VM_08340 IPR029151 Periplasmic sensor-like domain superfamily VM_08340 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_08340 IPR003660 HAMP domain VM_08340 IPR033479 Double Cache domain 1 VM_08345 IPR012340 Nucleic acid-binding, OB-fold VM_08345 IPR006195 Aminoacyl-tRNA synthetase, class II VM_08345 IPR004522 Asparagine-tRNA ligase VM_08345 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type VM_08345 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) VM_08345 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb VM_08350 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase VM_08350 IPR029056 Ribokinase-like VM_08350 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase VM_08355 IPR001451 Hexapeptide repeat VM_08355 IPR018357 Hexapeptide transferase, conserved site VM_08355 IPR039369 Galactoside O-acetyltransferase LacA-like VM_08355 IPR011004 Trimeric LpxA-like superfamily VM_08355 IPR024688 Maltose/galactoside acetyltransferase VM_08360 IPR037522 HD-GYP domain VM_08360 IPR006674 HD domain VM_08360 IPR003607 HD/PDEase domain VM_08360 IPR003660 HAMP domain VM_08365 IPR015424 Pyridoxal phosphate-dependent transferase VM_08365 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site VM_08365 IPR000796 Aspartate/other aminotransferase VM_08365 IPR004839 Aminotransferase, class I/classII VM_08365 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VM_08365 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VM_08380 IPR004090 Chemotaxis methyl-accepting receptor VM_08380 IPR033480 Single Cache domain 2 VM_08380 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_08380 IPR003660 HAMP domain VM_08385 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal VM_08385 IPR014718 Glycoside hydrolase-type carbohydrate-binding VM_08385 IPR023704 Glucan biosynthesis protein G VM_08385 IPR014756 Immunoglobulin E-set VM_08385 IPR014438 Glucan biosynthesis protein MdoG/MdoD VM_08385 IPR011013 Galactose mutarotase-like domain superfamily VM_08385 IPR013783 Immunoglobulin-like fold VM_08390 IPR029044 Nucleotide-diphospho-sugar transferases VM_08390 IPR023725 Glucan biosynthesis glucosyltransferase H VM_08390 IPR025993 Ceramide glucosyltransferase VM_08400 IPR006879 Carbohydrate deacetylase YdjC-like VM_08400 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel VM_08400 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria VM_08405 IPR019802 Glycoside hydrolase, family 4, conserved site VM_08405 IPR001088 Glycoside hydrolase, family 4 VM_08405 IPR022616 Glycosyl hydrolase, family 4, C-terminal VM_08405 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal VM_08405 IPR036291 NAD(P)-binding domain superfamily VM_08410 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily VM_08410 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit VM_08415 IPR003352 Phosphotransferase system, EIIC VM_08415 IPR004796 Phosphotransferase system, cellobiose-type IIC component VM_08415 IPR004501 Phosphotransferase system, EIIC component, type 3 VM_08420 IPR036095 PTS system IIB component-like superfamily VM_08420 IPR003501 Phosphotransferase system, EIIB component, type 2/3 VM_08420 IPR013012 Phosphotransferase system, EIIB component, type 3 VM_08425 IPR036573 Carbohydrate-binding module superfamily 5/12 VM_08425 IPR003610 Carbohydrate-binding module family 5/12 VM_08425 IPR002509 NodB homology domain VM_08425 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel VM_08430 IPR000060 BCCT transporter family VM_08430 IPR018093 BCCT transporter, conserved site VM_08435 IPR000835 MarR-type HTH domain VM_08435 IPR036390 Winged helix DNA-binding domain superfamily VM_08435 IPR036388 Winged helix-like DNA-binding domain superfamily VM_08440 IPR016032 Signal transduction response regulator, C-terminal effector VM_08440 IPR000792 Transcription regulator LuxR, C-terminal VM_08440 IPR011006 CheY-like superfamily VM_08440 IPR001789 Signal transduction response regulator, receiver domain VM_08445 IPR017171 Signal transduction histidine kinase, MctS VM_08445 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VM_08445 IPR033480 Single Cache domain 2 VM_08445 IPR003594 Histidine kinase/HSP90-like ATPase VM_08445 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain VM_08450 IPR004681 TRAP transporter large membrane protein DctM VM_08450 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VM_08460 IPR018389 TRAP transporter solute receptor DctP/TeaA VM_08460 IPR026289 Solute binding protein, TakP-like VM_08460 IPR041722 Alpha-keto acid binding periplasmic protein VM_08460 IPR038404 TRAP transporter solute receptor DctP superfamily VM_08475 IPR001279 Metallo-beta-lactamase VM_08475 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VM_08480 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily VM_08480 IPR010275 Protein of unknown function DUF882 VM_08480 IPR006311 Twin-arginine translocation pathway, signal sequence VM_08510 IPR014736 Transposase, Tn5-like, core VM_08510 IPR014735 Transposase, Tn5-like, N-terminal VM_08510 IPR002559 Transposase, IS4-like VM_08510 IPR003201 Transposase Tn5, dimerisation VM_08510 IPR014737 Transposase, Tn5-like, C-terminal VM_08510 IPR038215 Transposase, Tn5-like, N-terminal domain superfamily VM_08510 IPR012337 Ribonuclease H-like superfamily VM_08515 IPR036144 RibA-like superfamily VM_08515 IPR032677 GTP cyclohydrolase II VM_08515 IPR000926 GTP cyclohydrolase II, RibA VM_08525 IPR004750 Sugar efflux VM_08525 IPR011701 Major facilitator superfamily VM_08525 IPR036259 MFS transporter superfamily VM_08525 IPR020846 Major facilitator superfamily domain VM_08540 IPR012340 Nucleic acid-binding, OB-fold VM_08540 IPR012156 Cold shock, CspA VM_08540 IPR019844 Cold-shock (CSD) domain VM_08540 IPR002059 Cold-shock protein, DNA-binding VM_08540 IPR011129 Cold shock domain VM_08550 IPR019734 Tetratricopeptide repeat VM_08550 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily VM_08550 IPR017565 Formate-dependent nitrite reductase complex, subunit NrfF VM_08550 IPR013026 Tetratricopeptide repeat-containing domain VM_08550 IPR011990 Tetratricopeptide-like helical domain superfamily VM_08550 IPR005616 CcmH/CycL/Ccl2/NrfF family VM_08555 IPR013766 Thioredoxin domain VM_08555 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE VM_08555 IPR036249 Thioredoxin-like superfamily VM_08555 IPR013740 Redoxin VM_08555 IPR017937 Thioredoxin, conserved site VM_08560 IPR002541 Cytochrome c assembly protein VM_08560 IPR003567 Cytochrome c-type biogenesis protein VM_08560 IPR003568 Cytochrome c-type biogenesis protein CcmF VM_08560 IPR003570 Cytochrome c-type biogenesis protein NrfE VM_08560 IPR017563 Cytochrome c nitrate reductase biogenesis protein NrfE VM_08560 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal VM_08565 IPR005614 NrfD family VM_08565 IPR017566 NrfD VM_08570 IPR017567 Cytochrome c nitrite reductase, Fe-S protein VM_08570 IPR006311 Twin-arginine translocation pathway, signal sequence VM_08570 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VM_08570 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VM_08575 IPR011031 Multihaem cytochrome VM_08575 IPR017564 Cytochrome c nitrite reductase, pentahaem subunit VM_08575 IPR036280 Multiheme cytochrome superfamily VM_08580 IPR003321 Cytochrome c552 VM_08580 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit VM_08580 IPR011031 Multihaem cytochrome VM_08580 IPR036280 Multiheme cytochrome superfamily VM_08590 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily VM_08590 IPR005743 DNA gyrase, subunit A VM_08590 IPR013760 DNA topoisomerase, type IIA-like domain superfamily VM_08590 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal VM_08590 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta VM_08590 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat VM_08590 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal VM_08595 IPR010233 Ubiquinone biosynthesis O-methyltransferase VM_08595 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VM_08600 IPR013509 Ribonucleotide reductase large subunit, N-terminal VM_08600 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal VM_08600 IPR013346 Ribonucleotide reductase, class I , alpha subunit VM_08600 IPR005144 ATP-cone domain VM_08600 IPR039718 Ribonucleoside-diphosphate reductase large subunit VM_08600 IPR000788 Ribonucleotide reductase large subunit, C-terminal VM_08605 IPR009078 Ferritin-like superfamily VM_08605 IPR012348 Ribonucleotide reductase-like VM_08605 IPR000358 Ribonucleotide reductase small subunit family VM_08605 IPR030475 Ribonucleotide reductase small subunit, acitve site VM_08605 IPR033909 Ribonucleotide reductase small subunit VM_08610 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain VM_08610 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site VM_08610 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain VM_08610 IPR012675 Beta-grasp domain superfamily VM_08610 IPR036010 2Fe-2S ferredoxin-like superfamily VM_08610 IPR017927 FAD-binding domain, ferredoxin reductase-type VM_08610 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VM_08610 IPR001433 Oxidoreductase FAD/NAD(P)-binding VM_08610 IPR017938 Riboflavin synthase-like beta-barrel VM_08610 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase VM_08620 IPR001453 MoaB/Mog domain VM_08620 IPR036653 CinA-like, C-terminal VM_08620 IPR008135 Competence-induced protein CinA VM_08620 IPR036425 MoaB/Mog-like domain superfamily VM_08635 IPR000727 Target SNARE coiled-coil homology domain VM_08635 IPR033480 Single Cache domain 2 VM_08635 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_08635 IPR003660 HAMP domain VM_08635 IPR004090 Chemotaxis methyl-accepting receptor VM_08650 IPR003593 AAA+ ATPase domain VM_08650 IPR003439 ABC transporter-like VM_08650 IPR023693 ABC transporter, vitamin B12, BtuD VM_08650 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_08655 IPR037294 ABC transporter, BtuC-like VM_08655 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC VM_08655 IPR000522 ABC transporter, permease protein, BtuC-like VM_08660 IPR016681 Succinylglutamate desuccinylase VM_08660 IPR007036 Succinylglutamate desuccinylase/aspartoacylase VM_08670 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase VM_08670 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_08675 IPR003805 Adenosylcobinamide-GDP ribazoletransferase VM_08680 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily VM_08680 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic VM_08680 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like VM_08680 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal VM_08685 IPR002579 Peptide methionine sulphoxide reductase MrsB VM_08685 IPR028427 Peptide methionine sulfoxide reductase VM_08685 IPR011057 Mss4-like superfamily VM_08695 IPR034748 Exonuclease I, C-terminal alpha-helical domain VM_08695 IPR034747 Exonuclease I, SH3-like domain VM_08695 IPR038649 Exonuclease I, SH3-like domain superfamily VM_08695 IPR013620 Exodeoxyribonuclease I, C-terminal VM_08695 IPR013520 Exonuclease, RNase T/DNA polymerase III VM_08695 IPR036397 Ribonuclease H superfamily VM_08695 IPR023607 Exodeoxyribonuclease I VM_08695 IPR012337 Ribonuclease H-like superfamily VM_08700 IPR022957 Uncharacterised protein family UPF0299 VM_08700 IPR005538 LrgA/CidA family VM_08705 IPR007300 CidB/LrgB family VM_08705 IPR005261 Conserved hypothetical protein CHP00659 VM_08710 IPR002125 Cytidine and deoxycytidylate deaminase domain VM_08710 IPR016192 APOBEC/CMP deaminase, zinc-binding VM_08710 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain VM_08710 IPR006263 Cytidine deaminase, homodimeric VM_08710 IPR016193 Cytidine deaminase-like VM_08710 IPR020797 Cytidine deaminase, bacteria VM_08720 IPR011054 Rudiment single hybrid motif VM_08720 IPR011761 ATP-grasp fold VM_08720 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type VM_08720 IPR013815 ATP-grasp fold, subdomain 1 VM_08720 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase VM_08720 IPR016185 Pre-ATP-grasp domain superfamily VM_08725 IPR008854 TPMT family VM_08725 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification VM_08725 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VM_08725 IPR025835 Thiopurine S-methyltransferase VM_08740 IPR005684 Integration host factor, alpha subunit VM_08740 IPR020816 Histone-like DNA-binding protein, conserved site VM_08740 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily VM_08740 IPR000119 Histone-like DNA-binding protein VM_08745 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain VM_08745 IPR002547 tRNA-binding domain VM_08745 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain VM_08745 IPR005147 tRNA synthetase, B5-domain VM_08745 IPR005146 B3/B4 tRNA-binding domain VM_08745 IPR009061 Putative DNA-binding domain superfamily VM_08745 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit VM_08745 IPR012340 Nucleic acid-binding, OB-fold VM_08745 IPR005121 Ferrodoxin-fold anticodon-binding domain VM_08745 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily VM_08745 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 VM_08750 IPR006195 Aminoacyl-tRNA synthetase, class II VM_08750 IPR002319 Phenylalanyl-tRNA synthetase VM_08750 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm VM_08750 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial VM_08750 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit VM_08750 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal VM_08755 IPR016181 Acyl-CoA N-acyltransferase VM_08755 IPR000182 GNAT domain VM_08785 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial VM_08785 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase VM_08785 IPR000462 CDP-alcohol phosphatidyltransferase VM_08790 IPR001162 UvrC family homology region VM_08790 IPR001943 UVR domain VM_08790 IPR036876 UVR domain superfamily VM_08790 IPR038476 UvrC homology region 2 superfamily VM_08790 IPR010994 RuvA domain 2-like VM_08790 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 VM_08790 IPR035901 GIY-YIG endonuclease superfamily VM_08790 IPR000305 GIY-YIG endonuclease VM_08790 IPR004791 UvrABC system, subunit C VM_08795 IPR016032 Signal transduction response regulator, C-terminal effector VM_08795 IPR001789 Signal transduction response regulator, receiver domain VM_08795 IPR000792 Transcription regulator LuxR, C-terminal VM_08795 IPR011006 CheY-like superfamily VM_08800 IPR012337 Ribonuclease H-like superfamily VM_08800 IPR023211 DNA polymerase, palm domain superfamily VM_08800 IPR042087 DNA polymerase family B, C-terminal domain VM_08800 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain VM_08800 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain VM_08800 IPR036397 Ribonuclease H superfamily VM_08800 IPR017964 DNA-directed DNA polymerase, family B, conserved site VM_08800 IPR006172 DNA-directed DNA polymerase, family B VM_08805 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain VM_08805 IPR001633 EAL domain VM_08805 IPR035919 EAL domain superfamily VM_08815 IPR008991 Translation protein SH3-like domain superfamily VM_08815 IPR013852 Translation elongation factor P/YeiP, conserved site VM_08815 IPR014722 Ribosomal protein L2, domain 2 VM_08815 IPR020599 Translation elongation factor P/YeiP VM_08815 IPR015365 Elongation factor P, C-terminal VM_08815 IPR012340 Nucleic acid-binding, OB-fold VM_08815 IPR013185 Translation elongation factor, KOW-like VM_08815 IPR011897 Translation elongation factor P-like, YeiP VM_08815 IPR001059 Translation elongation factor P/YeiP, central VM_08820 IPR007376 dsDNA mimic, putative VM_08820 IPR036763 Putative dsDNA mimic superfamily VM_08830 IPR000524 Transcription regulator HTH, GntR VM_08830 IPR010248 Histidine utilization repressor VM_08830 IPR036390 Winged helix DNA-binding domain superfamily VM_08830 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VM_08830 IPR036388 Winged helix-like DNA-binding domain superfamily VM_08830 IPR011663 UbiC transcription regulator-associated VM_08835 IPR006680 Amidohydrolase-related VM_08835 IPR005920 Imidazolonepropionase VM_08835 IPR011059 Metal-dependent hydrolase, composite domain superfamily VM_08835 IPR032466 Metal-dependent hydrolase VM_08840 IPR006035 Ureohydrolase VM_08840 IPR020855 Ureohydrolase, manganese-binding site VM_08840 IPR005923 Formiminoglutamase VM_08840 IPR023696 Ureohydrolase domain superfamily VM_08845 IPR035401 Urocanase, C-terminal domain VM_08845 IPR023637 Urocanase VM_08845 IPR036190 Urocanase superfamily VM_08845 IPR035085 Urocanase, Rossmann-like domain VM_08845 IPR035400 Urocanase, N-terminal domain VM_08845 IPR023636 Urocanase conserved site VM_08845 IPR038364 Urocanase, central domain superfamily VM_08850 IPR001106 Aromatic amino acid lyase VM_08850 IPR024083 Fumarase/histidase, N-terminal VM_08850 IPR005921 Histidine ammonia-lyase VM_08850 IPR008948 L-Aspartase-like VM_08850 IPR022313 Phenylalanine/histidine ammonia-lyases, active site VM_08865 IPR007318 Phospholipid methyltransferase VM_08870 IPR036318 FAD-binding, type PCMH-like superfamily VM_08870 IPR016164 FAD-linked oxidase-like, C-terminal VM_08870 IPR016166 FAD-binding domain, PCMH-type VM_08870 IPR004113 FAD-linked oxidase, C-terminal VM_08870 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VM_08870 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VM_08870 IPR009051 Alpha-helical ferredoxin VM_08870 IPR006094 FAD linked oxidase, N-terminal VM_08885 IPR006664 Outer membrane protein, bacterial VM_08885 IPR006665 OmpA-like domain VM_08885 IPR039567 Glycine zipper domain VM_08885 IPR006690 Outer membrane protein, OmpA-like, conserved site VM_08885 IPR036737 OmpA-like domain superfamily VM_08905 IPR018236 SAICAR synthetase, conserved site VM_08905 IPR028923 SAICAR synthetase/ADE2, N-terminal VM_08905 IPR014106 Phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio-type VM_08915 IPR015884 Malic enzyme, conserved site VM_08915 IPR012301 Malic enzyme, N-terminal domain VM_08915 IPR037062 Malic enzyme, N-terminal domain superfamily VM_08915 IPR001891 Malic oxidoreductase VM_08915 IPR036291 NAD(P)-binding domain superfamily VM_08915 IPR023667 NAD-dependent malic enzyme, proteobacteria VM_08915 IPR012302 Malic enzyme, NAD-binding VM_08925 IPR003848 Domain of unknown function DUF218 VM_08925 IPR023604 Uncharacterised protein family SanA VM_08930 IPR035965 PAS domain superfamily VM_08930 IPR013656 PAS fold-4 VM_08930 IPR000700 PAS-associated, C-terminal VM_08930 IPR000014 PAS domain VM_08930 IPR029787 Nucleotide cyclase VM_08930 IPR000160 GGDEF domain VM_08945 IPR036188 FAD/NAD(P)-binding domain superfamily VM_08945 IPR023753 FAD/NAD(P)-binding domain VM_08945 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site VM_08945 IPR005982 Thioredoxin reductase VM_08950 IPR011527 ABC transporter type 1, transmembrane domain VM_08950 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_08950 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD VM_08950 IPR036640 ABC transporter type 1, transmembrane domain superfamily VM_08950 IPR003439 ABC transporter-like VM_08950 IPR017871 ABC transporter, conserved site VM_08950 IPR003593 AAA+ ATPase domain VM_08950 IPR039421 Type I protein exporter VM_08955 IPR003593 AAA+ ATPase domain VM_08955 IPR011527 ABC transporter type 1, transmembrane domain VM_08955 IPR036640 ABC transporter type 1, transmembrane domain superfamily VM_08955 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC VM_08955 IPR003439 ABC transporter-like VM_08955 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_08955 IPR017871 ABC transporter, conserved site VM_08960 IPR002942 RNA-binding S4 domain VM_08960 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain VM_08960 IPR020103 Pseudouridine synthase, catalytic domain superfamily VM_08960 IPR006145 Pseudouridine synthase, RsuA/RluA VM_08960 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site VM_08960 IPR036986 RNA-binding S4 domain superfamily VM_08960 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F VM_08965 IPR006070 YrdC-like domain VM_08965 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily VM_08970 IPR003141 Polymerase/histidinol phosphatase, N-terminal VM_08970 IPR016195 Polymerase/histidinol phosphatase-like VM_08970 IPR004013 PHP domain VM_08975 IPR012639 Tryptophan operon leader peptide VM_08980 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial VM_08980 IPR006805 Anthranilate synthase component I, N-terminal VM_08980 IPR019999 Anthranilate synthase component I-like VM_08980 IPR005801 ADC synthase VM_08980 IPR015890 Chorismate-utilising enzyme, C-terminal VM_08985 IPR029062 Class I glutamine amidotransferase-like VM_08985 IPR017926 Glutamine amidotransferase VM_08985 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain VM_08990 IPR005940 Anthranilate phosphoribosyl transferase VM_08990 IPR017459 Glycosyl transferase family 3, N-terminal domain VM_08990 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily VM_08990 IPR000312 Glycosyl transferase, family 3 VM_08990 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily VM_08995 IPR011060 Ribulose-phosphate binding barrel VM_08995 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) VM_08995 IPR001468 Indole-3-glycerol phosphate synthase, conserved site VM_08995 IPR013798 Indole-3-glycerol phosphate synthase VM_08995 IPR013785 Aldolase-type TIM barrel VM_09000 IPR006653 Tryptophan synthase, beta chain, conserved site VM_09000 IPR006654 Tryptophan synthase, beta chain VM_09000 IPR023026 Tryptophan synthase beta chain/beta chain-like VM_09000 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VM_09000 IPR001926 Pyridoxal-phosphate dependent enzyme VM_09005 IPR018204 Tryptophan synthase, alpha chain, active site VM_09005 IPR002028 Tryptophan synthase, alpha chain VM_09005 IPR013785 Aldolase-type TIM barrel VM_09005 IPR011060 Ribulose-phosphate binding barrel VM_09010 IPR036458 Sodium:dicarboxylate symporter superfamily VM_09010 IPR018107 Sodium:dicarboxylate symporter, conserved site VM_09010 IPR001991 Sodium:dicarboxylate symporter VM_09010 IPR023954 C4-dicarboxylate transport protein VM_09015 IPR036515 Transposase IS200-like superfamily VM_09015 IPR002686 Transposase IS200-like VM_09020 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_09020 IPR001267 Thymidine kinase VM_09020 IPR020633 Thymidine kinase, conserved site VM_09025 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type VM_09025 IPR012340 Nucleic acid-binding, OB-fold VM_09025 IPR029351 GAD domain VM_09025 IPR004115 GAD-like domain superfamily VM_09025 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb VM_09025 IPR006195 Aminoacyl-tRNA synthetase, class II VM_09025 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) VM_09025 IPR004524 Aspartate-tRNA ligase, type 1 VM_09030 IPR002763 Protein of unknown function DUF72 VM_09030 IPR036520 UPF0759 superfamily VM_09035 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VM_09035 IPR041698 Methyltransferase domain 25 VM_09035 IPR005271 Carboxy-S-adenosyl-L-methionine synthase VM_09040 IPR027555 tRNA (mo5U34)-methyltransferase-like VM_09040 IPR010017 tRNA U34 carboxymethyltransferase VM_09040 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VM_09045 IPR013815 ATP-grasp fold, subdomain 1 VM_09045 IPR021109 Aspartic peptidase domain superfamily VM_09045 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK VM_09045 IPR041107 RimK, PreATP-grasp domain VM_09045 IPR011761 ATP-grasp fold VM_09045 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX VM_09045 IPR013651 ATP-grasp fold, RimK-type VM_09060 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VM_09060 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VM_09060 IPR000192 Aminotransferase class V domain VM_09060 IPR022278 Phosphoserine aminotransferase VM_09060 IPR015424 Pyridoxal phosphate-dependent transferase VM_09070 IPR000014 PAS domain VM_09070 IPR035965 PAS domain superfamily VM_09070 IPR003594 Histidine kinase/HSP90-like ATPase VM_09070 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VM_09070 IPR005467 Histidine kinase domain VM_09070 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VM_09070 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VM_09070 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_09070 IPR013767 PAS fold VM_09090 IPR007077 TfoX, C-terminal VM_09090 IPR007076 TfoX, N-terminal VM_09090 IPR026256 Transcriptional regulator, TfoX/Sxy-type VM_09100 IPR005642 Lysine exporter LysO VM_09110 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VM_09110 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent VM_09110 IPR002129 Pyridoxal phosphate-dependent decarboxylase VM_09110 IPR015424 Pyridoxal phosphate-dependent transferase VM_09115 IPR009057 Homeobox-like domain superfamily VM_09115 IPR036388 Winged helix-like DNA-binding domain superfamily VM_09115 IPR035472 RpiR-like, SIS domain VM_09115 IPR000281 Helix-turn-helix protein RpiR VM_09115 IPR001347 Sugar isomerase (SIS) VM_09120 IPR018211 Alcohol dehydrogenase, iron-type, conserved site VM_09120 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA VM_09130 IPR036249 Thioredoxin-like superfamily VM_09130 IPR011902 Glutaredoxin, GrxA VM_09130 IPR014025 Glutaredoxin subgroup VM_09130 IPR002109 Glutaredoxin VM_09135 IPR006512 YidE/YbjL duplication VM_09135 IPR023017 Transport protein YbjL, putative VM_09135 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily VM_09135 IPR006037 Regulator of K+ conductance, C-terminal VM_09140 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA VM_09140 IPR036628 Clp, N-terminal domain superfamily VM_09140 IPR003593 AAA+ ATPase domain VM_09140 IPR003959 ATPase, AAA-type, core VM_09140 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_09140 IPR041546 ClpA/ClpB, AAA lid domain VM_09140 IPR028299 ClpA/B, conserved site 2 VM_09140 IPR019489 Clp ATPase, C-terminal VM_09140 IPR004176 Clp, N-terminal VM_09140 IPR001270 ClpA/B family VM_09140 IPR018368 ClpA/B, conserved site 1 VM_09145 IPR022935 ATP-dependent Clp protease adaptor protein ClpS VM_09145 IPR003769 Adaptor protein ClpS, core VM_09145 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VM_09150 IPR012751 CspD, cold shock VM_09150 IPR002059 Cold-shock protein, DNA-binding VM_09150 IPR019844 Cold-shock (CSD) domain VM_09150 IPR011129 Cold shock domain VM_09150 IPR012156 Cold shock, CspA VM_09150 IPR012340 Nucleic acid-binding, OB-fold VM_09155 IPR036515 Transposase IS200-like superfamily VM_09155 IPR002686 Transposase IS200-like VM_09160 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric VM_09165 IPR020103 Pseudouridine synthase, catalytic domain superfamily VM_09165 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site VM_09165 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain VM_09165 IPR006145 Pseudouridine synthase, RsuA/RluA VM_09165 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F VM_09170 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain VM_09170 IPR023019 Histidine biosynthesis bifunctional protein HisIE VM_09170 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily VM_09170 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase VM_09170 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like VM_09175 IPR013785 Aldolase-type TIM barrel VM_09175 IPR006062 Histidine biosynthesis VM_09175 IPR004651 Histidine biosynthesis, HisF VM_09175 IPR011060 Ribulose-phosphate binding barrel VM_09180 IPR011060 Ribulose-phosphate binding barrel VM_09180 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase VM_09180 IPR013785 Aldolase-type TIM barrel VM_09180 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA VM_09180 IPR006062 Histidine biosynthesis VM_09185 IPR010139 Imidazole glycerol phosphate synthase, subunit H VM_09185 IPR017926 Glutamine amidotransferase VM_09185 IPR029062 Class I glutamine amidotransferase-like VM_09190 IPR005954 Histidinol-phosphatase VM_09190 IPR013954 Polynucleotide kinase 3 phosphatase VM_09190 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site VM_09190 IPR000807 Imidazoleglycerol-phosphate dehydratase VM_09190 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily VM_09190 IPR006543 Histidinol-phosphate phosphatase VM_09190 IPR036412 HAD-like superfamily VM_09190 IPR006549 HAD-superfamily hydrolase,subfamily IIIA VM_09190 IPR023214 HAD superfamily VM_09190 IPR020568 Ribosomal protein S5 domain 2-type fold VM_09190 IPR020566 Histidine biosynthesis bifunctional protein HisB VM_09195 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VM_09195 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VM_09195 IPR015424 Pyridoxal phosphate-dependent transferase VM_09195 IPR004839 Aminotransferase, class I/classII VM_09195 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site VM_09195 IPR005861 Histidinol-phosphate aminotransferase family VM_09200 IPR012131 Histidinol dehydrogenase VM_09200 IPR022695 Histidinol dehydrogenase, monofunctional VM_09200 IPR001692 Histidinol dehydrogenase, conserved site VM_09200 IPR016161 Aldehyde/histidinol dehydrogenase VM_09205 IPR020621 ATP phosphoribosyltransferase HisG, long form VM_09205 IPR018198 ATP phosphoribosyltransferase, conserved site VM_09205 IPR013115 Histidine biosynthesis HisG, C-terminal VM_09205 IPR013820 ATP phosphoribosyltransferase, catalytic domain VM_09205 IPR011322 Nitrogen regulatory PII-like, alpha/beta VM_09205 IPR001348 ATP phosphoribosyltransferase HisG VM_09205 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VM_09210 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal VM_09215 IPR027454 Histone-like protein H-NS, N-terminal VM_09215 IPR027444 Histone-like protein H-NS, C-terminal domain VM_09215 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily VM_09215 IPR001801 Histone-like protein H-NS VM_09220 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site VM_09220 IPR029056 Ribokinase-like VM_09220 IPR011611 Carbohydrate kinase PfkB VM_09225 IPR004506 tRNA-specific 2-thiouridylase VM_09225 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_09225 IPR023382 Adenine nucleotide alpha hydrolase-like domains VM_09230 IPR035932 HflD-like superfamily VM_09230 IPR007451 High frequency lysogenization protein HflD VM_09235 IPR024083 Fumarase/histidase, N-terminal VM_09235 IPR000362 Fumarate lyase family VM_09235 IPR004769 Adenylosuccinate lyase VM_09235 IPR013539 Adenylosuccinate lyase PurB, C-terminal VM_09235 IPR008948 L-Aspartase-like VM_09235 IPR022761 Fumarate lyase, N-terminal VM_09235 IPR020557 Fumarate lyase, conserved site VM_09240 IPR016087 Chalcone isomerase VM_09250 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VM_09250 IPR003333 Mycolic acid cyclopropane synthase VM_09265 IPR002347 Short-chain dehydrogenase/reductase SDR VM_09265 IPR020904 Short-chain dehydrogenase/reductase, conserved site VM_09265 IPR036291 NAD(P)-binding domain superfamily VM_09275 IPR001915 Peptidase M48 VM_09275 IPR022919 Peptidase M48, protease HtpX, putative VM_09285 IPR004472 Dethiobiotin synthase BioD VM_09285 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_09290 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VM_09290 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC VM_09290 IPR013216 Methyltransferase type 11 VM_09295 IPR004839 Aminotransferase, class I/classII VM_09295 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VM_09295 IPR015424 Pyridoxal phosphate-dependent transferase VM_09295 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria VM_09295 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site VM_09295 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VM_09295 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type VM_09300 IPR024177 Biotin synthase VM_09300 IPR006638 Elp3/MiaB/NifB VM_09300 IPR010722 Biotin and thiamin synthesis-associated domain VM_09300 IPR013785 Aldolase-type TIM barrel VM_09300 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB VM_09300 IPR007197 Radical SAM VM_09305 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VM_09305 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VM_09305 IPR005814 Aminotransferase class-III VM_09305 IPR015424 Pyridoxal phosphate-dependent transferase VM_09305 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA VM_09310 IPR015866 Serine-tRNA synthetase, type1, N-terminal VM_09310 IPR002317 Serine-tRNA ligase, type1 VM_09310 IPR033729 Serine-tRNA ligase catalytic core domain VM_09310 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm VM_09310 IPR006195 Aminoacyl-tRNA synthetase, class II VM_09310 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily VM_09310 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) VM_09315 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal VM_09315 IPR032423 AAA C-terminal domain VM_09315 IPR021886 MgsA AAA+ ATPase C-terminal VM_09315 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_09315 IPR003593 AAA+ ATPase domain VM_09315 IPR003959 ATPase, AAA-type, core VM_09320 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria VM_09320 IPR029046 Lipoprotein localisation LolA/LolB/LppX VM_09320 IPR004564 Outer membrane lipoprotein carrier protein LolA-like VM_09325 IPR036670 SecA, preprotein cross-linking domain superfamily VM_09325 IPR011115 SecA DEAD-like, N-terminal VM_09325 IPR004027 SEC-C motif VM_09325 IPR011130 SecA, preprotein cross-linking domain VM_09325 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_09325 IPR036266 SecA, Wing/Scaffold superfamily VM_09325 IPR000185 Protein translocase subunit SecA VM_09325 IPR014018 SecA motor DEAD VM_09325 IPR020937 SecA conserved site VM_09325 IPR011116 SecA Wing/Scaffold VM_09330 IPR042270 tRNA-dihydrouridine(16) synthase, C-terminal VM_09330 IPR013785 Aldolase-type TIM barrel VM_09330 IPR035587 DUS-like, FMN-binding domain VM_09330 IPR018517 tRNA-dihydrouridine synthase, conserved site VM_09330 IPR001269 tRNA-dihydrouridine synthase VM_09330 IPR032886 tRNA-dihydrouridine(16) synthase VM_09335 IPR000160 GGDEF domain VM_09335 IPR007894 MASE2 VM_09335 IPR029787 Nucleotide cyclase VM_09340 IPR017871 ABC transporter, conserved site VM_09340 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_09340 IPR030946 Energy-coupling factor transporter ATP-binding protein EcfA2 VM_09340 IPR015856 ABC transporter, CbiO/EcfA subunit VM_09340 IPR003439 ABC transporter-like VM_09340 IPR003593 AAA+ ATPase domain VM_09345 IPR001851 ABC transporter, permease VM_09355 IPR036361 SAP domain superfamily VM_09355 IPR018668 DNA-binding protein VF530-like VM_09360 IPR007334 Uncharacterised protein family UPF0208 VM_09365 IPR004372 Acetate/propionate kinase VM_09365 IPR023865 Aliphatic acid kinase, short-chain, conserved site VM_09365 IPR000890 Aliphatic acid kinase, short-chain VM_09370 IPR004614 Phosphate acetyltransferase VM_09370 IPR042113 Phosphate acetyltransferase, domain 1 VM_09370 IPR016475 Phosphate acetyltransferase, bacteria VM_09370 IPR042112 Phosphate acetyltransferase, domain 2 VM_09370 IPR010766 DRTGG VM_09370 IPR002505 Phosphate acetyl/butaryl transferase VM_09370 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily VM_09370 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_09375 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VM_09375 IPR040079 Glutathione Transferase family VM_09375 IPR004045 Glutathione S-transferase, N-terminal VM_09375 IPR016639 Glutathione S-transferase Omega/GSH VM_09375 IPR036249 Thioredoxin-like superfamily VM_09375 IPR010987 Glutathione S-transferase, C-terminal-like VM_09380 IPR003439 ABC transporter-like VM_09380 IPR003593 AAA+ ATPase domain VM_09380 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_09380 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal VM_09380 IPR017871 ABC transporter, conserved site VM_09385 IPR017871 ABC transporter, conserved site VM_09385 IPR003439 ABC transporter-like VM_09385 IPR003593 AAA+ ATPase domain VM_09385 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_09385 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal VM_09390 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VM_09390 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VM_09390 IPR035906 MetI-like superfamily VM_09395 IPR035906 MetI-like superfamily VM_09395 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VM_09400 IPR039424 Solute-binding protein family 5 VM_09400 IPR023765 Solute-binding protein family 5, conserved site VM_09400 IPR000914 Solute-binding protein family 5 domain VM_09400 IPR030678 Peptide/nickel binding protein, MppA-type VM_09410 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_09410 IPR011006 CheY-like superfamily VM_09410 IPR001789 Signal transduction response regulator, receiver domain VM_09410 IPR003594 Histidine kinase/HSP90-like ATPase VM_09410 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VM_09410 IPR005467 Histidine kinase domain VM_09410 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VM_09410 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VM_09410 IPR000014 PAS domain VM_09410 IPR035965 PAS domain superfamily VM_09410 IPR013656 PAS fold-4 VM_09415 IPR002197 DNA binding HTH domain, Fis-type VM_09415 IPR003593 AAA+ ATPase domain VM_09415 IPR011006 CheY-like superfamily VM_09415 IPR025944 Sigma-54 interaction domain, conserved site VM_09415 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VM_09415 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VM_09415 IPR009057 Homeobox-like domain superfamily VM_09415 IPR002078 RNA polymerase sigma factor 54 interaction domain VM_09415 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_09415 IPR001789 Signal transduction response regulator, receiver domain VM_09420 IPR000014 PAS domain VM_09420 IPR035965 PAS domain superfamily VM_09420 IPR029787 Nucleotide cyclase VM_09420 IPR005330 MHYT domain VM_09420 IPR000160 GGDEF domain VM_09420 IPR035919 EAL domain superfamily VM_09420 IPR001633 EAL domain VM_09425 IPR003594 Histidine kinase/HSP90-like ATPase VM_09425 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VM_09425 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VM_09425 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VM_09425 IPR029151 Periplasmic sensor-like domain superfamily VM_09425 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_09425 IPR005467 Histidine kinase domain VM_09430 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VM_09430 IPR000014 PAS domain VM_09430 IPR035965 PAS domain superfamily VM_09430 IPR005467 Histidine kinase domain VM_09430 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VM_09430 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VM_09430 IPR013767 PAS fold VM_09430 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_09430 IPR003594 Histidine kinase/HSP90-like ATPase VM_09440 IPR011006 CheY-like superfamily VM_09440 IPR001789 Signal transduction response regulator, receiver domain VM_09455 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily VM_09455 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily VM_09455 IPR006070 YrdC-like domain VM_09455 IPR005145 Putative GTP-binding controlling metal-binding domain VM_09455 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 VM_09475 IPR008914 Phosphatidylethanolamine-binding protein VM_09475 IPR036610 PEBP-like superfamily VM_09475 IPR005247 YbhB/YbcL VM_09485 IPR029070 Chitinase insertion domain superfamily VM_09485 IPR036573 Carbohydrate-binding module superfamily 5/12 VM_09485 IPR013783 Immunoglobulin-like fold VM_09485 IPR001223 Glycoside hydrolase family 18, catalytic domain VM_09485 IPR011583 Chitinase II VM_09485 IPR017853 Glycoside hydrolase superfamily VM_09485 IPR003610 Carbohydrate-binding module family 5/12 VM_09485 IPR009470 Chitinase, C-terminal VM_09490 IPR000771 Fructose-bisphosphate aldolase, class-II VM_09490 IPR013785 Aldolase-type TIM barrel VM_09490 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY VM_09490 IPR023955 D-tagatose-bisphosphate aldolase, class II, subunit GatY VM_09495 IPR011059 Metal-dependent hydrolase, composite domain superfamily VM_09495 IPR006680 Amidohydrolase-related VM_09495 IPR003764 N-acetylglucosamine-6-phosphate deacetylase VM_09495 IPR032466 Metal-dependent hydrolase VM_09500 IPR033887 PTS system mannose/sorbose specific IIA subunit VM_09500 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily VM_09500 IPR004701 Phosphotransferase system, mannose-type IIA component VM_09505 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component VM_09510 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit VM_09515 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily VM_09515 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup VM_09515 IPR004720 Phosphotransferase system, sorbose subfamily IIB component VM_09520 IPR035466 GlmS/AgaS, SIS domain 1 VM_09520 IPR001347 Sugar isomerase (SIS) VM_09520 IPR035464 AgaS, SIS domain VM_09525 IPR013785 Aldolase-type TIM barrel VM_09525 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ-like VM_09525 IPR023435 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit KbaZ VM_09530 IPR037171 NagB/RpiA transferase-like VM_09530 IPR018356 Transcription regulator, HTH DeoR-type, conserved site VM_09530 IPR001034 DeoR-type HTH domain VM_09530 IPR014036 DeoR C-terminal sensor domain VM_09530 IPR036388 Winged helix-like DNA-binding domain superfamily VM_09530 IPR036390 Winged helix DNA-binding domain superfamily VM_09535 IPR036390 Winged helix DNA-binding domain superfamily VM_09535 IPR036388 Winged helix-like DNA-binding domain superfamily VM_09535 IPR014036 DeoR C-terminal sensor domain VM_09535 IPR018356 Transcription regulator, HTH DeoR-type, conserved site VM_09535 IPR037171 NagB/RpiA transferase-like VM_09535 IPR001034 DeoR-type HTH domain VM_09550 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site VM_09550 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain VM_09550 IPR036291 NAD(P)-binding domain superfamily VM_09550 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I VM_09550 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family VM_09550 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain VM_09555 IPR036390 Winged helix DNA-binding domain superfamily VM_09555 IPR001845 HTH ArsR-type DNA-binding domain VM_09555 IPR011991 ArsR-like helix-turn-helix domain VM_09555 IPR036388 Winged helix-like DNA-binding domain superfamily VM_09560 IPR002125 Cytidine and deoxycytidylate deaminase domain VM_09560 IPR016193 Cytidine deaminase-like VM_09560 IPR016192 APOBEC/CMP deaminase, zinc-binding VM_09565 IPR000390 Small multidrug resistance protein family VM_09570 IPR000390 Small multidrug resistance protein family VM_09575 IPR001853 DSBA-like thioredoxin domain VM_09575 IPR036249 Thioredoxin-like superfamily VM_09595 IPR017871 ABC transporter, conserved site VM_09595 IPR003593 AAA+ ATPase domain VM_09595 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_09595 IPR003439 ABC transporter-like VM_09600 IPR002491 ABC transporter periplasmic binding domain VM_09605 IPR037294 ABC transporter, BtuC-like VM_09605 IPR000522 ABC transporter, permease protein, BtuC-like VM_09610 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like VM_09610 IPR022770 Ferric iron reductase FhuF domain VM_09610 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal VM_09615 IPR019432 Siderophore biosynthesis protein, conserved domain VM_09615 IPR016181 Acyl-CoA N-acyltransferase VM_09620 IPR022770 Ferric iron reductase FhuF domain VM_09620 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal VM_09620 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like VM_09625 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase VM_09625 IPR036188 FAD/NAD(P)-binding domain superfamily VM_09630 IPR012910 TonB-dependent receptor, plug domain VM_09630 IPR010916 TonB box, conserved site VM_09630 IPR010105 TonB-dependent siderophore receptor VM_09630 IPR010917 TonB-dependent receptor, conserved site VM_09630 IPR039426 Vitamin B12 transporter BtuB-like VM_09630 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VM_09630 IPR000531 TonB-dependent receptor-like, beta-barrel VM_09630 IPR037066 TonB-dependent receptor, plug domain superfamily VM_09635 IPR038965 Transposase InsF-like VM_09635 IPR009057 Homeobox-like domain superfamily VM_09640 IPR004090 Chemotaxis methyl-accepting receptor VM_09640 IPR003660 HAMP domain VM_09640 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_09665 IPR029035 DHS-like NAD/FAD-binding domain superfamily VM_09665 IPR039444 SIR2-like domain VM_09670 IPR017961 DNA polymerase, Y-family, little finger domain VM_09670 IPR024728 DNA polymerase type-Y, HhH motif VM_09670 IPR025188 Domain of unknown function DUF4113 VM_09670 IPR036775 DNA polymerase, Y-family, little finger domain superfamily VM_09670 IPR001126 UmuC domain VM_09675 IPR006197 Peptidase S24, LexA-like VM_09675 IPR015927 Peptidase S24/S26A/S26B/S26C VM_09675 IPR036286 LexA/Signal peptidase-like superfamily VM_09675 IPR039418 LexA-like VM_09755 IPR001387 Cro/C1-type helix-turn-helix domain VM_09755 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VM_09780 IPR035919 EAL domain superfamily VM_09780 IPR001633 EAL domain VM_09780 IPR035965 PAS domain superfamily VM_09780 IPR029787 Nucleotide cyclase VM_09780 IPR005330 MHYT domain VM_09780 IPR000160 GGDEF domain VM_09790 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain VM_09790 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding VM_09790 IPR036388 Winged helix-like DNA-binding domain superfamily VM_09800 IPR003703 Acyl-CoA thioesterase VM_09800 IPR029069 HotDog domain superfamily VM_09805 IPR011008 Dimeric alpha-beta barrel VM_09805 IPR000485 AsnC-type HTH domain VM_09805 IPR011991 ArsR-like helix-turn-helix domain VM_09805 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VM_09805 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VM_09805 IPR019888 Transcription regulator AsnC-type VM_09805 IPR036388 Winged helix-like DNA-binding domain superfamily VM_09805 IPR036390 Winged helix DNA-binding domain superfamily VM_09810 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VM_09810 IPR023927 2,3-diaminopropionate biosynthesis protein SbnA VM_09810 IPR001926 Pyridoxal-phosphate dependent enzyme VM_09810 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site VM_09815 IPR013703 Peptidase S49, N-terminal proteobacteria VM_09815 IPR029045 ClpP/crotonase-like domain superfamily VM_09815 IPR002142 Peptidase S49 VM_09820 IPR020904 Short-chain dehydrogenase/reductase, conserved site VM_09820 IPR036291 NAD(P)-binding domain superfamily VM_09820 IPR002347 Short-chain dehydrogenase/reductase SDR VM_09825 IPR005358 Putative zinc- or iron-chelating domain containing protein VM_09825 IPR008228 Uncharacterised conserved protein UCP006173 VM_09830 IPR005358 Putative zinc- or iron-chelating domain containing protein VM_09835 IPR000093 DNA recombination protein RecR VM_09835 IPR023627 Recombination protein RecR VM_09835 IPR034137 RecR, TOPRIM domain VM_09835 IPR006171 TOPRIM domain VM_09835 IPR023628 Recombination protein RecR, C4-type zinc finger VM_09840 IPR004401 Nucleoid-associated protein YbaB/EbfC family VM_09840 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily VM_09845 IPR012763 DNA polymerase III, subunit gamma/ tau VM_09845 IPR022754 DNA polymerase III, gamma subunit, domain III VM_09845 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV VM_09845 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal VM_09845 IPR001270 ClpA/B family VM_09845 IPR003593 AAA+ ATPase domain VM_09845 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily VM_09845 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_09845 IPR021029 DNA polymerase III, tau subunit, domain V VM_09850 IPR005764 Adenine phosphoribosyl transferase VM_09850 IPR029057 Phosphoribosyltransferase-like VM_09850 IPR000836 Phosphoribosyltransferase domain VM_09855 IPR007401 Protein of unknown function DUF454 VM_09865 IPR036457 PPM-type phosphatase domain superfamily VM_09865 IPR028616 Regulator of RpoS VM_09865 IPR001789 Signal transduction response regulator, receiver domain VM_09865 IPR011006 CheY-like superfamily VM_09865 IPR039420 Transcriptional regulatory protein WalR-like VM_09870 IPR000847 Transcription regulator HTH, LysR VM_09870 IPR036388 Winged helix-like DNA-binding domain superfamily VM_09870 IPR036390 Winged helix DNA-binding domain superfamily VM_09870 IPR005119 LysR, substrate-binding VM_09875 IPR000415 Nitroreductase-like VM_09875 IPR029479 Nitroreductase VM_09875 IPR026021 Putative NAD(P)H nitroreductase YdjA-like VM_09880 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding VM_09880 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal VM_09880 IPR012802 Fatty oxidation complex, alpha subunit FadJ VM_09880 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily VM_09880 IPR029045 ClpP/crotonase-like domain superfamily VM_09880 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site VM_09880 IPR001753 Enoyl-CoA hydratase/isomerase VM_09880 IPR036291 NAD(P)-binding domain superfamily VM_09880 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site VM_09885 IPR020616 Thiolase, N-terminal VM_09885 IPR020613 Thiolase, conserved site VM_09885 IPR020617 Thiolase, C-terminal VM_09885 IPR016039 Thiolase-like VM_09885 IPR002155 Thiolase VM_09885 IPR012806 Acetyl-CoA C-acyltransferase FadI VM_09900 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) VM_09900 IPR042117 OMPP1/FadL/TodX superfamily VM_09905 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) VM_09905 IPR042117 OMPP1/FadL/TodX superfamily VM_09910 IPR017867 Protein-tyrosine phosphatase, low molecular weight VM_09910 IPR023485 Phosphotyrosine protein phosphatase I VM_09910 IPR036196 Phosphotyrosine protein phosphatase I superfamily VM_09915 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_09915 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain VM_09915 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR VM_09920 IPR007844 AsmA VM_09925 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_09925 IPR000764 Uridine kinase-like VM_09925 IPR026008 Uridine kinase VM_09925 IPR006083 Phosphoribulokinase/uridine kinase VM_09930 IPR019591 Mrp/NBP35 ATP-binding protein VM_09930 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 VM_09930 IPR000808 Mrp, conserved site VM_09930 IPR034904 Fe-S cluster assembly domain superfamily VM_09930 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_09935 IPR002547 tRNA-binding domain VM_09935 IPR029038 Methionyl-tRNA synthetase, Zn-domain VM_09935 IPR023458 Methionine-tRNA ligase, type 1 VM_09935 IPR015413 Methionyl/Leucyl tRNA synthetase VM_09935 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding VM_09935 IPR012340 Nucleic acid-binding, OB-fold VM_09935 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_09935 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site VM_09935 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain VM_09935 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal VM_09935 IPR033911 Methioninyl-tRNA synthetase core domain VM_09935 IPR014758 Methionyl-tRNA synthetase VM_09945 IPR010058 Uridine phosphorylase VM_09945 IPR035994 Nucleoside phosphorylase superfamily VM_09945 IPR018016 Nucleoside phosphorylase, conserved site VM_09945 IPR000845 Nucleoside phosphorylase domain VM_09950 IPR036163 Heavy metal-associated domain superfamily VM_09950 IPR017969 Heavy-metal-associated, conserved site VM_09950 IPR023214 HAD superfamily VM_09950 IPR006121 Heavy metal-associated domain, HMA VM_09950 IPR027256 P-type ATPase, subfamily IB VM_09950 IPR036412 HAD-like superfamily VM_09950 IPR001757 P-type ATPase VM_09950 IPR008250 P-type ATPase, A domain superfamily VM_09950 IPR023299 P-type ATPase, cytoplasmic domain N VM_09950 IPR023298 P-type ATPase, transmembrane domain superfamily VM_09950 IPR018303 P-type ATPase, phosphorylation site VM_09955 IPR015875 IMP dehydrogenase / GMP reductase, conserved site VM_09955 IPR013785 Aldolase-type TIM barrel VM_09955 IPR000644 CBS domain VM_09955 IPR005990 Inosine-5'-monophosphate dehydrogenase VM_09955 IPR001093 IMP dehydrogenase/GMP reductase VM_09960 IPR000160 GGDEF domain VM_09960 IPR009050 Globin-like superfamily VM_09960 IPR029787 Nucleotide cyclase VM_09960 IPR012292 Globin/Protoglobin VM_09960 IPR039435 Diguanylate cyclase DosC, globin sensor domain VM_09965 IPR003448 Molybdopterin biosynthesis MoaE VM_09965 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily VM_09970 IPR003749 Sulfur carrier ThiS/MoaD-like VM_09970 IPR012675 Beta-grasp domain superfamily VM_09970 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VM_09975 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily VM_09975 IPR023045 Molybdenum cofactor biosynthesis C VM_09975 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain VM_09980 IPR012245 Molybdenum cofactor biosynthesis protein MoaB VM_09980 IPR008284 Molybdenum cofactor biosynthesis, conserved site VM_09980 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria VM_09980 IPR001453 MoaB/Mog domain VM_09980 IPR036425 MoaB/Mog-like domain superfamily VM_09985 IPR006638 Elp3/MiaB/NifB VM_09985 IPR010505 Molybdenum cofactor synthesis C-terminal VM_09985 IPR013785 Aldolase-type TIM barrel VM_09985 IPR007197 Radical SAM VM_09985 IPR013483 Molybdenum cofactor biosynthesis protein A VM_09990 IPR038136 Gluconeogenesis factor superfamily VM_09990 IPR010119 Gluconeogenesis factor VM_09990 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 VM_09995 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain VM_09995 IPR036641 HPT domain superfamily VM_10000 IPR011006 CheY-like superfamily VM_10000 IPR003593 AAA+ ATPase domain VM_10000 IPR009057 Homeobox-like domain superfamily VM_10000 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_10000 IPR002197 DNA binding HTH domain, Fis-type VM_10000 IPR001789 Signal transduction response regulator, receiver domain VM_10000 IPR002078 RNA polymerase sigma factor 54 interaction domain VM_10000 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VM_10000 IPR025944 Sigma-54 interaction domain, conserved site VM_10005 IPR004807 UvrABC system, subunit B VM_10005 IPR006935 Helicase/UvrB, N-terminal VM_10005 IPR036876 UVR domain superfamily VM_10005 IPR014001 Helicase superfamily 1/2, ATP-binding domain VM_10005 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_10005 IPR024759 UvrB, YAD/RRR-motif-containing domain VM_10005 IPR001943 UVR domain VM_10005 IPR041471 UvrB, interaction domain VM_10005 IPR001650 Helicase, C-terminal VM_10015 IPR000847 Transcription regulator HTH, LysR VM_10015 IPR005119 LysR, substrate-binding VM_10015 IPR036390 Winged helix DNA-binding domain superfamily VM_10015 IPR037416 Nodulation protein D, PBP2 VM_10015 IPR036388 Winged helix-like DNA-binding domain superfamily VM_10020 IPR000917 Sulfatase, N-terminal VM_10020 IPR024607 Sulfatase, conserved site VM_10020 IPR017850 Alkaline-phosphatase-like, core domain superfamily VM_10025 IPR007197 Radical SAM VM_10025 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme VM_10025 IPR013785 Aldolase-type TIM barrel VM_10025 IPR023885 4Fe4S-binding SPASM domain VM_10030 IPR041628 ChlI/MoxR, AAA lid domain VM_10030 IPR011703 ATPase, AAA-3 VM_10030 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_10045 IPR036465 von Willebrand factor A-like domain superfamily VM_10045 IPR002035 von Willebrand factor, type A VM_10045 IPR033881 von Willebrand factor domain BatA-type VM_10065 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA VM_10065 IPR003667 NqrDE/RnfAE VM_10070 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VM_10070 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VM_10070 IPR007202 4Fe-4S domain VM_10070 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria VM_10070 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB VM_10075 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily VM_10075 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain VM_10075 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC VM_10075 IPR009051 Alpha-helical ferredoxin VM_10075 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VM_10075 IPR019554 Soluble ligand binding domain VM_10075 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VM_10075 IPR026902 RnfC Barrel sandwich hybrid domain VM_10080 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD VM_10080 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D VM_10085 IPR007329 FMN-binding VM_10085 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG VM_10090 IPR010968 Ion-translocating oxidoreductase complex subunit E VM_10090 IPR003667 NqrDE/RnfAE VM_10095 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif VM_10095 IPR004036 Endonuclease III-like, conserved site-2 VM_10095 IPR004035 Endonuclease III, iron-sulphur binding site VM_10095 IPR003265 HhH-GPD domain VM_10095 IPR000445 Helix-hairpin-helix motif VM_10095 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal VM_10095 IPR005759 Endonuclease III VM_10095 IPR011257 DNA glycosylase VM_10100 IPR037523 Vicinal oxygen chelate (VOC) domain VM_10100 IPR018146 Glyoxalase I, conserved site VM_10100 IPR004361 Glyoxalase I VM_10100 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VM_10100 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VM_10105 IPR014736 Transposase, Tn5-like, core VM_10105 IPR014737 Transposase, Tn5-like, C-terminal VM_10105 IPR012337 Ribonuclease H-like superfamily VM_10105 IPR003201 Transposase Tn5, dimerisation VM_10105 IPR002559 Transposase, IS4-like VM_10105 IPR038215 Transposase, Tn5-like, N-terminal domain superfamily VM_10105 IPR014735 Transposase, Tn5-like, N-terminal VM_10110 IPR020206 Uncharacterised protein family, VP2110 VM_10115 IPR036737 OmpA-like domain superfamily VM_10115 IPR006665 OmpA-like domain VM_10115 IPR006690 Outer membrane protein, OmpA-like, conserved site VM_10115 IPR041544 MotY N-terminal domain VM_10120 IPR013520 Exonuclease, RNase T/DNA polymerase III VM_10120 IPR005987 Ribonuclease T VM_10120 IPR012337 Ribonuclease H-like superfamily VM_10120 IPR036397 Ribonuclease H superfamily VM_10125 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal VM_10125 IPR032813 Putative Na+/H+ antiporter, N-terminal VM_10130 IPR029057 Phosphoribosyltransferase-like VM_10130 IPR000836 Phosphoribosyltransferase domain VM_10130 IPR029055 Nucleophile aminohydrolases, N-terminal VM_10130 IPR017932 Glutamine amidotransferase type 2 domain VM_10130 IPR005854 Amidophosphoribosyltransferase VM_10130 IPR035584 Amidophosphoribosyltransferase, N-terminal VM_10135 IPR003825 Colicin V production, CvpA VM_10140 IPR032898 Cell division protein DedD VM_10140 IPR007730 Sporulation-like domain VM_10140 IPR036680 Sporulation-like domain superfamily VM_10145 IPR036615 Mur ligase, C-terminal domain superfamily VM_10145 IPR013221 Mur ligase, central VM_10145 IPR001645 Folylpolyglutamate synthetase VM_10145 IPR018109 Folylpolyglutamate synthetase, conserved site VM_10145 IPR036565 Mur-like, catalytic domain superfamily VM_10145 IPR004101 Mur ligase, C-terminal VM_10150 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal VM_10150 IPR029045 ClpP/crotonase-like domain superfamily VM_10150 IPR041010 Acetyl-coA carboxylase zinc finger domain VM_10150 IPR034733 Acetyl-CoA carboxylase VM_10150 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit VM_10155 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain VM_10155 IPR020095 Pseudouridine synthase I, TruA, C-terminal VM_10155 IPR020103 Pseudouridine synthase, catalytic domain superfamily VM_10155 IPR001406 Pseudouridine synthase I, TruA VM_10165 IPR022861 Glutamine-tRNA ligase, bacterial VM_10165 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal VM_10165 IPR004514 Glutamine-tRNA synthetase VM_10165 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain VM_10165 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily VM_10165 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_10165 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily VM_10165 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain VM_10165 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site VM_10165 IPR000924 Glutamyl/glutaminyl-tRNA synthetase VM_10170 IPR003352 Phosphotransferase system, EIIC VM_10170 IPR036878 Glucose permease domain IIB VM_10170 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 VM_10170 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site VM_10170 IPR011055 Duplicated hybrid motif VM_10170 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component VM_10170 IPR001996 Phosphotransferase system, IIB component, type 1 VM_10170 IPR013013 Phosphotransferase system, EIIC component, type 1 VM_10175 IPR006680 Amidohydrolase-related VM_10175 IPR003764 N-acetylglucosamine-6-phosphate deacetylase VM_10175 IPR011059 Metal-dependent hydrolase, composite domain superfamily VM_10175 IPR032466 Metal-dependent hydrolase VM_10180 IPR036388 Winged helix-like DNA-binding domain superfamily VM_10180 IPR000600 ROK family VM_10180 IPR036390 Winged helix DNA-binding domain superfamily VM_10180 IPR000835 MarR-type HTH domain VM_10185 IPR036291 NAD(P)-binding domain superfamily VM_10185 IPR004771 K+/H+ exchanger VM_10185 IPR038770 Sodium/solute symporter superfamily VM_10185 IPR006153 Cation/H+ exchanger VM_10185 IPR003148 Regulator of K+ conductance, N-terminal VM_10190 IPR017932 Glutamine amidotransferase type 2 domain VM_10190 IPR029055 Nucleophile aminohydrolases, N-terminal VM_10190 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_10190 IPR001962 Asparagine synthase VM_10190 IPR033738 Asparagine synthase, N-terminal domain VM_10190 IPR006426 Asparagine synthase, glutamine-hydrolyzing VM_10195 IPR006645 NusG, N-terminal VM_10195 IPR036735 NusG, N-terminal domain superfamily VM_10195 IPR010215 Transcription antitermination protein RfaH VM_10200 IPR005279 Dipeptide/tripeptide permease VM_10200 IPR023517 Amino acid/peptide transporter family, dipeptide and tripeptide permease A VM_10200 IPR036259 MFS transporter superfamily VM_10200 IPR000109 Proton-dependent oligopeptide transporter family VM_10200 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site VM_10200 IPR020846 Major facilitator superfamily domain VM_10205 IPR033659 Ferrochelatase, N-terminal VM_10205 IPR033644 Ferrochelatase, C-terminal VM_10205 IPR019772 Ferrochelatase, active site VM_10205 IPR001015 Ferrochelatase VM_10210 IPR033690 Adenylate kinase, conserved site VM_10210 IPR000850 Adenylate kinase/UMP-CMP kinase VM_10210 IPR006259 Adenylate kinase subfamily VM_10210 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_10210 IPR007862 Adenylate kinase, active site lid domain VM_10215 IPR001404 Heat shock protein Hsp90 family VM_10215 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VM_10215 IPR037196 HSP90, C-terminal domain VM_10215 IPR020575 Heat shock protein Hsp90, N-terminal VM_10215 IPR019805 Heat shock protein Hsp90, conserved site VM_10215 IPR020568 Ribosomal protein S5 domain 2-type fold VM_10215 IPR003594 Histidine kinase/HSP90-like ATPase VM_10220 IPR016032 Signal transduction response regulator, C-terminal effector VM_10220 IPR039420 Transcriptional regulatory protein WalR-like VM_10220 IPR001867 OmpR/PhoB-type DNA-binding domain VM_10220 IPR036388 Winged helix-like DNA-binding domain superfamily VM_10225 IPR035288 Trans-membrane regulatory protein ToxS VM_10235 IPR020935 Phosphodiesterase YfcE, conserved site VM_10235 IPR000979 Phosphodiesterase MJ0936/Vps29 VM_10235 IPR041802 YfcE-like, metallophosphatase domain VM_10235 IPR029052 Metallo-dependent phosphatase-like VM_10235 IPR024654 Calcineurin-like phosphoesterase domain, lpxH-type VM_10240 IPR001509 NAD-dependent epimerase/dehydratase VM_10240 IPR013549 Domain of unknown function DUF1731 VM_10240 IPR036291 NAD(P)-binding domain superfamily VM_10240 IPR010099 Epimerase family protein SDR39U1 VM_10245 IPR036291 NAD(P)-binding domain superfamily VM_10245 IPR002347 Short-chain dehydrogenase/reductase SDR VM_10245 IPR020904 Short-chain dehydrogenase/reductase, conserved site VM_10250 IPR036249 Thioredoxin-like superfamily VM_10250 IPR011990 Tetratricopeptide-like helical domain superfamily VM_10250 IPR013766 Thioredoxin domain VM_10255 IPR001107 Band 7 domain VM_10255 IPR032435 Band 7, C-terminal extension VM_10255 IPR001972 Stomatin family VM_10255 IPR036013 Band 7/SPFH domain superfamily VM_10255 IPR018080 Band 7/stomatin-like, conserved site VM_10260 IPR002810 NfeD-like, C-terminal domain VM_10265 IPR011789 Cu(I)-responsive transcriptional regulator VM_10265 IPR000551 MerR-type HTH domain VM_10265 IPR009061 Putative DNA-binding domain superfamily VM_10275 IPR023614 Porin domain superfamily VM_10275 IPR033900 Porin domain, Gram-negative type VM_10275 IPR001702 Porin, Gram-negative type VM_10275 IPR002299 Porin, Neisseria sp. type VM_10280 IPR012340 Nucleic acid-binding, OB-fold VM_10280 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 VM_10280 IPR018239 NAD-dependent DNA ligase, active site VM_10280 IPR041663 DisA/LigA, helix-hairpin-helix motif VM_10280 IPR013839 NAD-dependent DNA ligase, adenylation VM_10280 IPR001679 NAD-dependent DNA ligase VM_10280 IPR033136 NAD-dependent DNA ligase, conserved site VM_10280 IPR013840 NAD-dependent DNA ligase, N-terminal VM_10280 IPR001357 BRCT domain VM_10280 IPR036420 BRCT domain superfamily VM_10280 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type VM_10280 IPR004150 NAD-dependent DNA ligase, OB-fold VM_10280 IPR010994 RuvA domain 2-like VM_10285 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily VM_10285 IPR007449 ZipA, C-terminal FtsZ-binding domain VM_10285 IPR011919 Cell division protein ZipA VM_10290 IPR022985 Sulfate transporter CysZ VM_10295 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VM_10295 IPR001926 Pyridoxal-phosphate dependent enzyme VM_10295 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site VM_10295 IPR005859 Cysteine synthase CysK VM_10295 IPR005856 Cysteine synthase VM_10305 IPR000032 Phosphocarrier protein HPr-like VM_10305 IPR002114 Phosphotransferase system, HPr serine phosphorylation site VM_10305 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site VM_10305 IPR035895 HPr-like superfamily VM_10310 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily VM_10310 IPR040442 Pyruvate kinase-like domain superfamily VM_10310 IPR036618 PtsI, HPr-binding domain superfamily VM_10310 IPR008731 Phosphotransferase system, enzyme I N-terminal VM_10310 IPR006318 Phosphotransferase system, enzyme I-like VM_10310 IPR024692 Phosphotransferase system, enzyme I VM_10310 IPR036637 Phosphohistidine domain superfamily VM_10310 IPR023151 PEP-utilising enzyme, conserved site VM_10310 IPR000121 PEP-utilising enzyme, C-terminal VM_10310 IPR018274 PEP-utilising enzyme, active site VM_10310 IPR008279 PEP-utilising enzyme, mobile domain VM_10315 IPR011055 Duplicated hybrid motif VM_10315 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 VM_10320 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 VM_10320 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site VM_10320 IPR002938 FAD-binding domain VM_10320 IPR036188 FAD/NAD(P)-binding domain superfamily VM_10325 IPR007197 Radical SAM VM_10325 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB VM_10325 IPR038135 Methylthiotransferase, N-terminal domain superfamily VM_10325 IPR013848 Methylthiotransferase, N-terminal VM_10325 IPR020612 Methylthiotransferase, conserved site VM_10325 IPR005839 Methylthiotransferase VM_10325 IPR006638 Elp3/MiaB/NifB VM_10325 IPR023404 Radical SAM, alpha/beta horseshoe VM_10325 IPR002792 TRAM domain VM_10330 IPR003714 PhoH-like protein VM_10330 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_10335 IPR020549 Endoribonuclease YbeY, conserved site VM_10335 IPR002036 Endoribonuclease YbeY VM_10335 IPR023091 Metalloprotease catalytic domain superfamily, predicted VM_10340 IPR016169 FAD-binding, type PCMH, subdomain 2 VM_10340 IPR000644 CBS domain VM_10340 IPR036318 FAD-binding, type PCMH-like superfamily VM_10340 IPR005170 Transporter-associated domain VM_10345 IPR036526 Carbon-nitrogen hydrolase superfamily VM_10345 IPR003010 Carbon-nitrogen hydrolase VM_10345 IPR004563 Apolipoprotein N-acyltransferase VM_10350 IPR009912 Zinc-ribbon containing domain VM_10355 IPR002302 Leucine-tRNA ligase VM_10355 IPR002300 Aminoacyl-tRNA synthetase, class Ia VM_10355 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site VM_10355 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_10355 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding VM_10355 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain VM_10355 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding VM_10355 IPR025709 Leucyl-tRNA synthetase, editing domain VM_10360 IPR007485 LPS-assembly lipoprotein LptE VM_10365 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal VM_10365 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_10365 IPR005790 DNA polymerase III, delta subunit VM_10365 IPR010372 DNA polymerase III delta, N-terminal VM_10365 IPR032780 DNA polymerase III subunit delta, C-terminal VM_10370 IPR004394 Protein Iojap/ribosomal silencing factor RsfS VM_10375 IPR029028 Alpha/beta knot methyltransferases VM_10375 IPR003742 RNA methyltransferase RlmH VM_10375 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VM_10380 IPR012338 Beta-lactamase/transpeptidase-like VM_10380 IPR001460 Penicillin-binding protein, transpeptidase VM_10380 IPR017790 Penicillin-binding protein 2 VM_10380 IPR005311 Penicillin-binding protein, dimerisation domain VM_10380 IPR036138 Penicillin-binding protein, dimerisation domain superfamily VM_10385 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB VM_10385 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA VM_10385 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site VM_10390 IPR034718 Endolytic peptidoglycan transglycosylase RlpA VM_10390 IPR036908 RlpA-like domain superfamily VM_10390 IPR012997 Rare lipoprotein A VM_10390 IPR036680 Sporulation-like domain superfamily VM_10390 IPR009009 RlpA-like protein, double-psi beta-barrel domain VM_10390 IPR007730 Sporulation-like domain VM_10395 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A VM_10395 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal VM_10395 IPR012338 Beta-lactamase/transpeptidase-like VM_10395 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily VM_10395 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal VM_10395 IPR015956 Penicillin-binding protein, C-terminal domain superfamily VM_10400 IPR027471 YbeD-like domain superfamily VM_10400 IPR007454 Uncharacterised protein family UPF0250 VM_10405 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain VM_10405 IPR000544 Octanoyltransferase VM_10405 IPR020605 Octanoyltransferase, conserved site VM_10410 IPR007197 Radical SAM VM_10410 IPR003698 Lipoyl synthase VM_10410 IPR013785 Aldolase-type TIM barrel VM_10410 IPR006638 Elp3/MiaB/NifB VM_10410 IPR031691 Lipoyl synthase, N-terminal VM_10420 IPR015424 Pyridoxal phosphate-dependent transferase VM_10420 IPR039429 Serine hydroxymethyltransferase-like domain VM_10420 IPR001085 Serine hydroxymethyltransferase VM_10420 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VM_10420 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VM_10420 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site VM_10440 IPR005702 Exopolysaccharide synthesis protein VM_10440 IPR032807 Tyrosine kinase, G-rich domain VM_10440 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_10440 IPR003856 Polysaccharide chain length determinant N-terminal domain VM_10440 IPR025669 AAA domain VM_10445 IPR003715 Polysaccharide export protein VM_10445 IPR019554 Soluble ligand binding domain VM_10445 IPR040716 Outer-membrane lipoprotein Wza, C-terminal domain VM_10455 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase VM_10455 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ VM_10455 IPR003362 Bacterial sugar transferase VM_10470 IPR019503 Peptidase M66 domain VM_10470 IPR022218 ToxR activated gene A lipoprotein domain VM_10470 IPR040966 Metalloprotease StcE, C-terminal VM_10485 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase VM_10485 IPR004629 Glycosyl transferase WecB/TagA/CpsF VM_10485 IPR028082 Periplasmic binding protein-like I VM_10495 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain VM_10495 IPR001296 Glycosyl transferase, family 1 VM_10505 IPR042122 Serine acetyltransferase, N-terminal domain superfamily VM_10505 IPR010493 Serine acetyltransferase, N-terminal VM_10505 IPR011004 Trimeric LpxA-like superfamily VM_10505 IPR018357 Hexapeptide transferase, conserved site VM_10505 IPR001451 Hexapeptide repeat VM_10505 IPR005881 Serine O-acetyltransferase VM_10530 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase VM_10530 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily VM_10530 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation VM_10530 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal VM_10530 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal VM_10530 IPR017476 UDP-glucose/GDP-mannose dehydrogenase VM_10530 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily VM_10530 IPR036291 NAD(P)-binding domain superfamily VM_10535 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like VM_10535 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain VM_10535 IPR032892 UDP-N-acetylglucosamine 2-epimerase WecB VM_10545 IPR001036 Acriflavin resistance protein VM_10545 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VM_10550 IPR006143 RND efflux pump, membrane fusion protein VM_10550 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VM_10550 IPR022824 Multidrug resistance protein MdtA VM_10585 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VM_10585 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VM_10585 IPR005467 Histidine kinase domain VM_10585 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_10585 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VM_10585 IPR003660 HAMP domain VM_10585 IPR003594 Histidine kinase/HSP90-like ATPase VM_10590 IPR011006 CheY-like superfamily VM_10590 IPR039420 Transcriptional regulatory protein WalR-like VM_10590 IPR001789 Signal transduction response regulator, receiver domain VM_10590 IPR036388 Winged helix-like DNA-binding domain superfamily VM_10590 IPR016032 Signal transduction response regulator, C-terminal effector VM_10590 IPR001867 OmpR/PhoB-type DNA-binding domain VM_10595 IPR012769 Trehalose-6-phosphate hydrolase VM_10595 IPR032091 Maltogenic Amylase, C-terminal VM_10595 IPR017853 Glycoside hydrolase superfamily VM_10595 IPR013780 Glycosyl hydrolase, all-beta VM_10595 IPR006047 Glycosyl hydrolase, family 13, catalytic domain VM_10600 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component VM_10600 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site VM_10600 IPR003352 Phosphotransferase system, EIIC VM_10600 IPR013013 Phosphotransferase system, EIIC component, type 1 VM_10600 IPR001996 Phosphotransferase system, IIB component, type 1 VM_10600 IPR036878 Glucose permease domain IIB VM_10600 IPR011296 Phosphotransferase system, trehalose-specific IIBC component VM_10605 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VM_10605 IPR000843 LacI-type HTH domain VM_10605 IPR028082 Periplasmic binding protein-like I VM_10605 IPR012771 Trehalose operon repressor VM_10610 IPR006549 HAD-superfamily hydrolase,subfamily IIIA VM_10610 IPR023214 HAD superfamily VM_10610 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase VM_10610 IPR036412 HAD-like superfamily VM_10610 IPR006543 Histidinol-phosphate phosphatase VM_10615 IPR026253 Methionine import ATP-binding protein MetN VM_10615 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_10615 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain VM_10615 IPR003593 AAA+ ATPase domain VM_10615 IPR017871 ABC transporter, conserved site VM_10615 IPR018449 NIL domain VM_10615 IPR003439 ABC transporter-like VM_10615 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal VM_10615 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria VM_10620 IPR035906 MetI-like superfamily VM_10620 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VM_10625 IPR004872 Lipoprotein NlpA family VM_10630 IPR016908 Uncharacterised conserved protein UCP029037 VM_10635 IPR009948 Syd VM_10635 IPR038228 Syd superfamily VM_10640 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 VM_10640 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF VM_10640 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal VM_10650 IPR029787 Nucleotide cyclase VM_10650 IPR000160 GGDEF domain VM_10655 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily VM_10655 IPR021826 Domain of unknown function DUF3412 VM_10655 IPR031100 LOG family VM_10655 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal VM_10660 IPR036279 5'-3' exonuclease, C-terminal domain superfamily VM_10660 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal VM_10660 IPR020045 DNA polymerase I-like, H3TH domain VM_10660 IPR022895 Flap endonuclease Xni VM_10660 IPR029060 PIN-like domain superfamily VM_10660 IPR002421 5'-3' exonuclease, N-terminal VM_10660 IPR008918 Helix-hairpin-helix motif, class 2 VM_10660 IPR038969 Flap endonuclease VM_10665 IPR006696 Protein of unknown function DUF423 VM_10670 IPR036390 Winged helix DNA-binding domain superfamily VM_10670 IPR036388 Winged helix-like DNA-binding domain superfamily VM_10670 IPR000847 Transcription regulator HTH, LysR VM_10670 IPR005119 LysR, substrate-binding VM_10680 IPR036873 Rhodanese-like domain superfamily VM_10680 IPR003720 tRNA sulfurtransferase ThiI VM_10680 IPR020536 Thil, AANH domain VM_10680 IPR026340 Thiazole biosynthesis domain VM_10680 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_10680 IPR001763 Rhodanese-like domain VM_10680 IPR004114 THUMP domain VM_10685 IPR036737 OmpA-like domain superfamily VM_10685 IPR006665 OmpA-like domain VM_10685 IPR025713 Motility protein B, N-terminal domain VM_10690 IPR002898 MotA/TolQ/ExbB proton channel VM_10690 IPR000540 Flagellar motor protein MotA, conserved site VM_10695 IPR003761 Exonuclease VII, small subunit VM_10695 IPR037004 Exonuclease VII, small subunit superfamily VM_10700 IPR033749 Polyprenyl synthetase, conserved site VM_10700 IPR008949 Isoprenoid synthase domain superfamily VM_10700 IPR000092 Polyprenyl synthetase VM_10705 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II VM_10705 IPR005475 Transketolase-like, pyrimidine-binding domain VM_10705 IPR020826 Transketolase binding site VM_10705 IPR033248 Transketolase, C-terminal domain VM_10705 IPR005474 Transketolase, N-terminal VM_10705 IPR029061 Thiamin diphosphate-binding fold VM_10705 IPR005477 Deoxyxylulose-5-phosphate synthase VM_10710 IPR006145 Pseudouridine synthase, RsuA/RluA VM_10710 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site VM_10710 IPR020103 Pseudouridine synthase, catalytic domain superfamily VM_10740 IPR003791 Protein of unknown function UPF0178 VM_10745 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT VM_10745 IPR011540 AbgT, Proteobacteria VM_10750 IPR035977 Ribosomal protein L36 superfamily VM_10750 IPR000473 Ribosomal protein L36 VM_10755 IPR027493 Ribosomal protein L31 type B VM_10755 IPR042105 Ribosomal protein L31 superfamily VM_10755 IPR002150 Ribosomal protein L31 VM_10755 IPR034704 L28p-like VM_10760 IPR023370 TrmO-like, N-terminal domain VM_10760 IPR041369 TrmO, C-terminal VM_10760 IPR023368 Uncharacterised protein family UPF0066, conserved site VM_10760 IPR040372 YaeB-like VM_10760 IPR036413 YaeB-like superfamily VM_10760 IPR036414 YaeB, N-terminal domain superfamily VM_10765 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type VM_10765 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 VM_10765 IPR033730 Prokaryote proline-tRNA ligase core domain VM_10765 IPR006195 Aminoacyl-tRNA synthetase, class II VM_10765 IPR004154 Anticodon-binding VM_10765 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) VM_10765 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily VM_10765 IPR002316 Proline-tRNA ligase, class IIa VM_10765 IPR036621 Anticodon-binding domain superfamily VM_10765 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain VM_10775 IPR009624 Uncharacterised protein family UPF0253 VM_10785 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain VM_10785 IPR010073 Phosphoribosylformylglycinamidine synthase PurL VM_10785 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal VM_10785 IPR029062 Class I glutamine amidotransferase-like VM_10785 IPR017926 Glutamine amidotransferase VM_10785 IPR036676 PurM-like, C-terminal domain superfamily VM_10785 IPR036921 PurM-like, N-terminal domain superfamily VM_10785 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily VM_10785 IPR010918 PurM-like, C-terminal domain VM_10795 IPR023346 Lysozyme-like domain superfamily VM_10795 IPR023703 Membrane-bound lytic murein transglycosylase F VM_10795 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VM_10795 IPR000189 Prokaryotic transglycosylase, active site VM_10795 IPR008258 Transglycosylase SLT domain 1 VM_10805 IPR016193 Cytidine deaminase-like VM_10805 IPR002125 Cytidine and deoxycytidylate deaminase domain VM_10805 IPR016192 APOBEC/CMP deaminase, zinc-binding VM_10805 IPR028883 tRNA-specific adenosine deaminase VM_10810 IPR011540 AbgT, Proteobacteria VM_10810 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT VM_10845 IPR036869 Chaperone J-domain superfamily VM_10845 IPR001623 DnaJ domain VM_10845 IPR001305 Heat shock protein DnaJ, cysteine-rich domain VM_10845 IPR008971 HSP40/DnaJ peptide-binding VM_10845 IPR018253 DnaJ domain, conserved site VM_10845 IPR012724 Chaperone DnaJ VM_10845 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily VM_10845 IPR002939 Chaperone DnaJ, C-terminal VM_10850 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily VM_10850 IPR012725 Chaperone DnaK VM_10850 IPR018181 Heat shock protein 70, conserved site VM_10850 IPR013126 Heat shock protein 70 family VM_10850 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily VM_10855 IPR000740 GrpE nucleotide exchange factor VM_10855 IPR009012 GrpE nucleotide exchange factor, head VM_10855 IPR013805 GrpE nucleotide exchange factor, coiled-coil VM_10860 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal VM_10860 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily VM_10860 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal VM_10860 IPR002504 NAD kinase VM_10865 IPR004604 DNA recombination/repair protein RecN VM_10865 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_10865 IPR003395 RecF/RecN/SMC, N-terminal VM_10870 IPR026592 Outer membrane protein assembly factor BamE VM_10870 IPR037873 BamE-like VM_10870 IPR007450 Lipoprotein SmpA/OmlA VM_10875 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VM_10875 IPR037021 RnfH superfamily VM_10875 IPR005346 RnfH protein VM_10880 IPR023393 START-like domain superfamily VM_10880 IPR005031 Coenzyme Q-binding protein COQ10, START domain VM_10885 IPR023620 Small protein B VM_10885 IPR000037 SsrA-binding protein VM_10885 IPR020081 SsrA-binding protein, conserved site VM_10895 IPR011010 DNA breaking-rejoining enzyme, catalytic core VM_10895 IPR025166 Integrase, DNA-binding domain VM_10895 IPR010998 Integrase/recombinase, N-terminal VM_10895 IPR013762 Integrase-like, catalytic domain superfamily VM_10895 IPR002104 Integrase, catalytic domain VM_10895 IPR038488 Integrase, DNA-binding domain superfamily VM_10905 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VM_10905 IPR038722 Ner, winged helix-turn-helix DNA-binding domain VM_10910 IPR015378 Transposase-like, Mu, C-terminal VM_10910 IPR003314 Mu-type HTH domain VM_10910 IPR036397 Ribonuclease H superfamily VM_10910 IPR009057 Homeobox-like domain superfamily VM_10910 IPR009061 Putative DNA-binding domain superfamily VM_10910 IPR004189 Bacteriophage Mu, transposase VM_10910 IPR015126 Mu DNA binding, I gamma subdomain VM_10910 IPR009004 Transposase, Mu, C-terminal VM_10910 IPR012337 Ribonuclease H-like superfamily VM_10910 IPR036388 Winged helix-like DNA-binding domain superfamily VM_10915 IPR003593 AAA+ ATPase domain VM_10915 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_10915 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VM_10915 IPR001387 Cro/C1-type helix-turn-helix domain VM_10915 IPR009084 B transposition protein, C-terminal VM_10915 IPR036733 B transposition protein, C-terminal domain superfamily VM_11035 IPR036390 Winged helix DNA-binding domain superfamily VM_11035 IPR013668 Ribonuclease R winged-helix domain VM_11040 IPR021874 Bacteriophage Mu, Gp27 VM_11045 IPR004921 Terminase large subunit, T4likevirus-type VM_11045 IPR012036 Bacteriophage Mu, Gp28 VM_11050 IPR009279 Protein of unknown function DUF935 VM_11080 IPR018774 Bacteriophage Mu, GpT VM_11090 IPR009752 Bacteriophage Mu, Gp36 VM_11120 IPR019289 Bacteriophage tail protein Gp41, putative VM_11140 IPR013046 Phage baseplate assembly protein V/Gp45 VM_11140 IPR014462 Phage-associated protein Gp45 VM_11150 IPR006949 Baseplate protein J-like VM_11155 IPR018755 Bacteriophage Mu-like, Gp48 VM_11175 IPR038965 Transposase InsF-like VM_11175 IPR009057 Homeobox-like domain superfamily VM_11180 IPR040980 SWI2/SNF2 ATPase VM_11180 IPR004473 Restriction endonuclease, type I, HsdR VM_11180 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal VM_11180 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_11180 IPR014001 Helicase superfamily 1/2, ATP-binding domain VM_11180 IPR021810 Protein of unknown function DUF3387 VM_11185 IPR000055 Restriction endonuclease, type I, HsdS VM_11190 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VM_11190 IPR003356 DNA methylase, adenine-specific VM_11190 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily VM_11205 IPR028348 FAD dependent protein VM_11205 IPR036188 FAD/NAD(P)-binding domain superfamily VM_11210 IPR000813 7Fe ferredoxin VM_11210 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VM_11210 IPR022569 Ferredoxin, C-terminal VM_11210 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VM_11215 IPR029064 50S ribosomal protein L30e-like VM_11215 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VM_11215 IPR013123 RNA 2-O ribose methyltransferase, substrate binding VM_11215 IPR001537 tRNA/rRNA methyltransferase, SpoU type VM_11215 IPR029028 Alpha/beta knot methyltransferases VM_11225 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG VM_11225 IPR002736 Triphosphoribosyl-dephospho-CoA protein VM_11230 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase VM_11235 IPR006472 Citrate lyase, alpha subunit VM_11235 IPR037171 NagB/RpiA transferase-like VM_11240 IPR005000 HpcH/HpaI aldolase/citrate lyase domain VM_11240 IPR040442 Pyruvate kinase-like domain superfamily VM_11240 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily VM_11240 IPR006475 Citrate lyase, beta subunit, bacteria VM_11240 IPR011206 Citrate lyase beta subunit-like VM_11245 IPR006495 Citrate lyase acyl carrier protein CitD VM_11245 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein VM_11250 IPR000182 GNAT domain VM_11250 IPR004821 Cytidyltransferase-like domain VM_11250 IPR013166 Citrate lyase ligase, C-terminal VM_11250 IPR005216 Citrate lyase ligase VM_11250 IPR016181 Acyl-CoA N-acyltransferase VM_11250 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_11255 IPR018025 2-hydroxycarboxylate transporter, Proteobacteria/Firmicutes VM_11255 IPR004679 2-hydroxycarboxylate transporter VM_11260 IPR005899 Sodium ion-translocating decarboxylase VM_11260 IPR023424 Oxaloacetate decarboxylase gamma chain, probable VM_11265 IPR011053 Single hybrid motif VM_11265 IPR013785 Aldolase-type TIM barrel VM_11265 IPR001882 Biotin-binding site VM_11265 IPR000891 Pyruvate carboxyltransferase VM_11265 IPR005776 Oxaloacetate decarboxylase, alpha subunit VM_11265 IPR003379 Carboxylase, conserved domain VM_11265 IPR000089 Biotin/lipoyl attachment VM_11270 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit VM_11275 IPR003594 Histidine kinase/HSP90-like ATPase VM_11275 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VM_11275 IPR005467 Histidine kinase domain VM_11275 IPR000014 PAS domain VM_11275 IPR035965 PAS domain superfamily VM_11275 IPR029151 Periplasmic sensor-like domain superfamily VM_11275 IPR033463 Single cache domain 3 VM_11275 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB VM_11275 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_11280 IPR028141 Transcriptional regulator VM_11280 IPR001789 Signal transduction response regulator, receiver domain VM_11280 IPR024187 Signal transduction response regulator, citrate/malate metabolism VM_11280 IPR011006 CheY-like superfamily VM_11290 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain VM_11290 IPR001633 EAL domain VM_11290 IPR035919 EAL domain superfamily VM_11305 IPR005119 LysR, substrate-binding VM_11305 IPR000847 Transcription regulator HTH, LysR VM_11305 IPR036388 Winged helix-like DNA-binding domain superfamily VM_11305 IPR036390 Winged helix DNA-binding domain superfamily VM_11310 IPR023080 D-amino acid dehydrogenase DadA VM_11310 IPR006076 FAD dependent oxidoreductase VM_11310 IPR036188 FAD/NAD(P)-binding domain superfamily VM_11315 IPR001463 Sodium:alanine symporter VM_11320 IPR038536 Alkyl/aryl-sulfatase, dimerisation domain superfamily VM_11320 IPR029229 Alkyl sulfatase, C-terminal VM_11320 IPR029228 Alkyl sulfatase dimerisation domain VM_11320 IPR036527 SCP2 sterol-binding domain superfamily VM_11320 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VM_11320 IPR001279 Metallo-beta-lactamase VM_11325 IPR036390 Winged helix DNA-binding domain superfamily VM_11325 IPR036388 Winged helix-like DNA-binding domain superfamily VM_11325 IPR000847 Transcription regulator HTH, LysR VM_11325 IPR005119 LysR, substrate-binding VM_11330 IPR000791 Acetate transporter GPR1/FUN34/SatP family VM_11335 IPR029070 Chitinase insertion domain superfamily VM_11335 IPR009470 Chitinase, C-terminal VM_11335 IPR011583 Chitinase II VM_11335 IPR003610 Carbohydrate-binding module family 5/12 VM_11335 IPR001223 Glycoside hydrolase family 18, catalytic domain VM_11335 IPR036573 Carbohydrate-binding module superfamily 5/12 VM_11335 IPR017853 Glycoside hydrolase superfamily VM_11335 IPR013783 Immunoglobulin-like fold VM_11340 IPR029062 Class I glutamine amidotransferase-like VM_11340 IPR022955 GMP synthase VM_11340 IPR001674 GMP synthase, C-terminal VM_11340 IPR017926 Glutamine amidotransferase VM_11340 IPR004739 GMP synthase, glutamine amidotransferase VM_11340 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_11340 IPR025777 GMP synthetase ATP pyrophosphatase domain VM_11340 IPR022310 NAD/GMP synthase VM_11345 IPR005990 Inosine-5'-monophosphate dehydrogenase VM_11345 IPR015875 IMP dehydrogenase / GMP reductase, conserved site VM_11345 IPR001093 IMP dehydrogenase/GMP reductase VM_11345 IPR000644 CBS domain VM_11345 IPR013785 Aldolase-type TIM barrel VM_11350 IPR003753 Exonuclease VII, large subunit VM_11350 IPR025824 OB-fold nucleic acid binding domain VM_11350 IPR020579 Exonuclease VII, large subunit, C-terminal VM_11365 IPR003593 AAA+ ATPase domain VM_11365 IPR031166 EngA-type guanine nucleotide-binding (G) domain VM_11365 IPR005225 Small GTP-binding protein domain VM_11365 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_11365 IPR015946 K homology domain-like, alpha/beta VM_11365 IPR032859 GTPase Der, C-terminal KH-domain-like VM_11365 IPR016484 GTP-binding protein EngA VM_11365 IPR006073 GTP binding domain VM_11370 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VM_11370 IPR017687 Outer membrane protein assembly factor BamB VM_11370 IPR015943 WD40/YVTN repeat-like-containing domain superfamily VM_11370 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily VM_11370 IPR002372 Pyrrolo-quinoline quinone repeat VM_11375 IPR011990 Tetratricopeptide-like helical domain superfamily VM_11375 IPR018704 Tetratricopeptide repeat-like domain VM_11375 IPR026039 Uncharacterised protein family UPF0070 VM_11380 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain VM_11380 IPR015807 Histidine-tRNA ligase VM_11380 IPR036621 Anticodon-binding domain superfamily VM_11380 IPR004154 Anticodon-binding VM_11380 IPR006195 Aminoacyl-tRNA synthetase, class II VM_11380 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit VM_11380 IPR033656 Histidyl-anticodon-binding VM_11385 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial VM_11385 IPR011005 Dihydropteroate synthase-like VM_11385 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type VM_11390 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VM_11390 IPR025194 Domain of unknown function DUF4115 VM_11390 IPR001387 Cro/C1-type helix-turn-helix domain VM_11390 IPR023690 Cytoskeleton protein RodZ VM_11395 IPR007197 Radical SAM VM_11395 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr VM_11395 IPR027492 Dual-specificity RNA methyltransferase RlmN VM_11395 IPR040072 Methyltransferase (Class A) VM_11395 IPR013785 Aldolase-type TIM barrel VM_11400 IPR023005 Nucleoside diphosphate kinase, active site VM_11400 IPR034907 Nucleoside diphosphate kinase-like domain VM_11400 IPR001564 Nucleoside diphosphate kinase VM_11400 IPR036850 Nucleoside diphosphate kinase-like domain superfamily VM_11405 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal VM_11405 IPR001346 Interferon regulatory factor DNA-binding domain VM_11405 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B VM_11405 IPR008330 Peptidase M17, peptidase B VM_11410 IPR007479 ISC system FeS cluster assembly, IscX VM_11410 IPR036762 IscX-like superfamily VM_11415 IPR036010 2Fe-2S ferredoxin-like superfamily VM_11415 IPR001055 Adrenodoxin VM_11415 IPR018298 Adrenodoxin, iron-sulphur binding site VM_11415 IPR012675 Beta-grasp domain superfamily VM_11415 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain VM_11415 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria VM_11420 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily VM_11420 IPR010236 ISC system FeS cluster assembly, HscA chaperone VM_11420 IPR013126 Heat shock protein 70 family VM_11420 IPR018181 Heat shock protein 70, conserved site VM_11420 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily VM_11420 IPR042039 HscA chaperone, nucleotide-binding domain VM_11425 IPR036869 Chaperone J-domain superfamily VM_11425 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain VM_11425 IPR004640 Co-chaperone Hsc20 VM_11425 IPR036386 HscB, C-terminal domain superfamily VM_11425 IPR001623 DnaJ domain VM_11430 IPR016092 FeS cluster insertion protein VM_11430 IPR011302 Iron-binding protein IscA, proteobacteria VM_11430 IPR000361 FeS cluster biogenesis VM_11430 IPR035903 HesB-like domain superfamily VM_11430 IPR017870 FeS cluster insertion, C-terminal, conserved site VM_11435 IPR011339 ISC system FeS cluster assembly, IscU scaffold VM_11435 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal VM_11440 IPR000192 Aminotransferase class V domain VM_11440 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VM_11440 IPR015424 Pyridoxal phosphate-dependent transferase VM_11440 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VM_11440 IPR010240 Cysteine desulfurase IscS VM_11440 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VM_11440 IPR016454 Cysteine desulfurase VM_11445 IPR030489 Transcription regulator Rrf2-type, conserved site VM_11445 IPR036388 Winged helix-like DNA-binding domain superfamily VM_11445 IPR036390 Winged helix DNA-binding domain superfamily VM_11445 IPR000944 Transcription regulator Rrf2-type VM_11445 IPR010242 Transcription factor HTH, IscR VM_11450 IPR001537 tRNA/rRNA methyltransferase, SpoU type VM_11450 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VM_11450 IPR029028 Alpha/beta knot methyltransferases VM_11450 IPR004384 RNA methyltransferase TrmJ/LasT VM_11455 IPR022337 Inositol monophosphatase, SuhB VM_11455 IPR033942 Inositol monophosphatase VM_11455 IPR020583 Inositol monophosphatase, metal-binding site VM_11455 IPR000760 Inositol monophosphatase-like VM_11455 IPR020550 Inositol monophosphatase, conserved site VM_11460 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VM_11460 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VM_11460 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VM_11460 IPR005665 Protein-export membrane protein SecF, bacterial VM_11465 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VM_11465 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VM_11465 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VM_11465 IPR001036 Acriflavin resistance protein VM_11465 IPR005791 Protein translocase subunit SecD VM_11465 IPR027398 SecD export protein N-terminal TM domain VM_11470 IPR003849 Preprotein translocase YajC VM_11475 IPR036511 Queuine tRNA-ribosyltransferase-like VM_11475 IPR002616 tRNA-guanine(15) transglycosylase-like VM_11475 IPR004803 tRNA-guanine transglycosylase VM_11485 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily VM_11485 IPR042119 QueA, domain 2 VM_11485 IPR042118 QueA, domain 1 VM_11485 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA VM_11490 IPR000644 CBS domain VM_11495 IPR029151 Periplasmic sensor-like domain superfamily VM_11495 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_11500 IPR039556 ICL/PEPM domain VM_11500 IPR006254 Isocitrate lyase VM_11500 IPR040442 Pyruvate kinase-like domain superfamily VM_11500 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily VM_11500 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site VM_11505 IPR001465 Malate synthase VM_11505 IPR006252 Malate synthase A VM_11505 IPR011076 Malate synthase-like superfamily VM_11505 IPR019830 Malate synthase, conserved site VM_11510 IPR036390 Winged helix DNA-binding domain superfamily VM_11510 IPR036388 Winged helix-like DNA-binding domain superfamily VM_11510 IPR000847 Transcription regulator HTH, LysR VM_11510 IPR005119 LysR, substrate-binding VM_11515 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant VM_11515 IPR036249 Thioredoxin-like superfamily VM_11515 IPR019479 Peroxiredoxin, C-terminal VM_11515 IPR024706 Peroxiredoxin, AhpC-type VM_11515 IPR013766 Thioredoxin domain VM_11520 IPR005627 Copper homeostasis protein CutC VM_11520 IPR036822 Copper homeostasis (CutC) domain superfamily VM_11520 IPR023648 Copper homeostasis CutC domain VM_11525 IPR022486 Polyphosphate kinase 2, PA0141 VM_11525 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_11525 IPR016898 Polyphosphate kinase 2 VM_11525 IPR022488 Polyphosphate kinase-2-related VM_11530 IPR028366 Phosphate transport system protein PhoU VM_11530 IPR038078 PhoU-like domain superfamily VM_11530 IPR026022 PhoU domain VM_11535 IPR003593 AAA+ ATPase domain VM_11535 IPR003439 ABC transporter-like VM_11535 IPR017871 ABC transporter, conserved site VM_11535 IPR015850 ABC transporter, phosphate import, PstB VM_11535 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_11535 IPR005670 Phosphate transport system permease protein 1 VM_11540 IPR005672 Phosphate transport system permease protein PstA VM_11540 IPR035906 MetI-like superfamily VM_11540 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VM_11545 IPR011864 Phosphate ABC transporter, permease protein PstC VM_11545 IPR035906 MetI-like superfamily VM_11545 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VM_11550 IPR024953 Polyphosphate kinase middle domain VM_11550 IPR025198 Polyphosphate kinase N-terminal domain VM_11550 IPR025200 Polyphosphate kinase C-terminal domain 2 VM_11550 IPR001736 Phospholipase D/Transphosphatidylase VM_11550 IPR036832 Polyphosphate kinase N-terminal domain superfamily VM_11550 IPR003414 Polyphosphate kinase VM_11550 IPR036830 Polyphosphate kinase middle domain superfamily VM_11550 IPR041108 Polyphosphate kinase, C-terminal domain 1 VM_11555 IPR022371 Exopolyphosphatase VM_11555 IPR030673 Pyrophosphatase, GppA/Ppx-type VM_11555 IPR003695 Ppx/GppA phosphatase VM_11560 IPR024370 PBP domain VM_11560 IPR011862 Phosphate binding protein VM_11565 IPR000014 PAS domain VM_11565 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VM_11565 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_11565 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR VM_11565 IPR003594 Histidine kinase/HSP90-like ATPase VM_11565 IPR021766 Phosphate regulon sensor protein PhoR VM_11565 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VM_11565 IPR005467 Histidine kinase domain VM_11565 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VM_11565 IPR013767 PAS fold VM_11565 IPR035965 PAS domain superfamily VM_11570 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB VM_11570 IPR011006 CheY-like superfamily VM_11570 IPR001789 Signal transduction response regulator, receiver domain VM_11570 IPR036388 Winged helix-like DNA-binding domain superfamily VM_11570 IPR039420 Transcriptional regulatory protein WalR-like VM_11570 IPR001867 OmpR/PhoB-type DNA-binding domain VM_11575 IPR007476 Putative exonuclease, RdgC VM_11585 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VM_11585 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VM_11595 IPR016446 Flavin oxidoreductase Frp family VM_11595 IPR029479 Nitroreductase VM_11595 IPR000415 Nitroreductase-like VM_11605 IPR029058 Alpha/Beta hydrolase fold VM_11605 IPR002925 Dienelactone hydrolase VM_11640 IPR003593 AAA+ ATPase domain VM_11640 IPR003959 ATPase, AAA-type, core VM_11640 IPR017730 Chaperonin ClpB VM_11640 IPR019489 Clp ATPase, C-terminal VM_11640 IPR018368 ClpA/B, conserved site 1 VM_11640 IPR036628 Clp, N-terminal domain superfamily VM_11640 IPR028299 ClpA/B, conserved site 2 VM_11640 IPR004176 Clp, N-terminal VM_11640 IPR001270 ClpA/B family VM_11640 IPR041546 ClpA/ClpB, AAA lid domain VM_11640 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_11650 IPR020103 Pseudouridine synthase, catalytic domain superfamily VM_11650 IPR002942 RNA-binding S4 domain VM_11650 IPR036986 RNA-binding S4 domain superfamily VM_11650 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site VM_11650 IPR006145 Pseudouridine synthase, RsuA/RluA VM_11650 IPR006225 Pseudouridine synthase, RluC/RluD VM_11655 IPR017689 Outer membrane protein assembly factor BamD VM_11655 IPR011990 Tetratricopeptide-like helical domain superfamily VM_11655 IPR039565 Outer membrane lipoprotein BamD-like VM_11660 IPR036567 Ribosome hibernation promotion factor-like VM_11660 IPR003489 Ribosome hibernation promoting factor/RaiA VM_11665 IPR002912 ACT domain VM_11665 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase VM_11665 IPR010952 Chorismate mutase, gammaproteobacteria VM_11665 IPR001086 Prephenate dehydratase VM_11665 IPR018528 Prephenate dehydratase, conserved site VM_11665 IPR002701 Chorismate mutase II, prokaryotic-type VM_11665 IPR036263 Chorismate mutase type II superfamily VM_11665 IPR036979 Chorismate mutase domain superfamily VM_11670 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein VM_11670 IPR006059 Bacterial extracellular solute-binding protein VM_11675 IPR003660 HAMP domain VM_11675 IPR000160 GGDEF domain VM_11675 IPR029787 Nucleotide cyclase VM_11675 IPR035919 EAL domain superfamily VM_11675 IPR001633 EAL domain VM_11680 IPR029001 Inosine triphosphate pyrophosphatase-like VM_11680 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 VM_11680 IPR002786 Inosine/xanthosine triphosphatase VM_11685 IPR038116 TrpR-like superfamily VM_11685 IPR000831 Trp repressor VM_11685 IPR013335 Trp repressor, bacterial VM_11685 IPR010921 Trp repressor/replication initiator VM_11690 IPR008258 Transglycosylase SLT domain 1 VM_11690 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily VM_11690 IPR008939 Lytic transglycosylase, superhelical U-shaped VM_11690 IPR012289 Lytic transglycosylase, superhelical linker VM_11690 IPR000189 Prokaryotic transglycosylase, active site VM_11690 IPR023346 Lysozyme-like domain superfamily VM_11695 IPR022374 Energy-dependent translational throttle protein EttA VM_11695 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_11695 IPR003439 ABC transporter-like VM_11695 IPR032781 ABC-transporter extension domain VM_11695 IPR003593 AAA+ ATPase domain VM_11695 IPR017871 ABC transporter, conserved site VM_11700 IPR027021 Cyclic di-GMP binding protein, PA4608 type VM_11700 IPR009875 PilZ domain VM_11705 IPR036263 Chorismate mutase type II superfamily VM_11705 IPR002701 Chorismate mutase II, prokaryotic-type VM_11705 IPR036979 Chorismate mutase domain superfamily VM_11705 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein VM_11705 IPR003099 Prephenate dehydrogenase VM_11705 IPR036291 NAD(P)-binding domain superfamily VM_11705 IPR011277 Chorismate mutase, T-protein VM_11705 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily VM_11710 IPR006219 DHAP synthase, class 1 VM_11710 IPR006218 DAHP synthetase I/KDSA VM_11710 IPR013785 Aldolase-type TIM barrel VM_11715 IPR003018 GAF domain VM_11715 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VM_11715 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region VM_11715 IPR010559 Signal transduction histidine kinase, internal region VM_11720 IPR011006 CheY-like superfamily VM_11720 IPR007492 LytTR DNA-binding domain VM_11720 IPR001789 Signal transduction response regulator, receiver domain VM_11725 IPR022956 Beta-hexosaminidase, bacterial VM_11725 IPR017853 Glycoside hydrolase superfamily VM_11725 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily VM_11725 IPR001764 Glycoside hydrolase, family 3, N-terminal VM_11725 IPR019800 Glycoside hydrolase, family 3, active site VM_11730 IPR005338 Anhydro-N-acetylmuramic acid kinase VM_11735 IPR001347 Sugar isomerase (SIS) VM_11735 IPR040190 N-acetylmuramic acid 6-phosphate etherase/glucokinase regulatory protein VM_11735 IPR005486 Glucokinase regulatory protein, conserved site VM_11735 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ VM_11750 IPR003706 CstA, N-terminal domain VM_11755 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase VM_11760 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VM_11765 IPR001872 Peptidase A8, signal peptidase II VM_11770 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding VM_11770 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_11770 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site VM_11770 IPR010663 Zinc finger, FPG/IleRS-type VM_11770 IPR002300 Aminoacyl-tRNA synthetase, class Ia VM_11770 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain VM_11770 IPR002301 Isoleucine-tRNA ligase VM_11770 IPR023585 Isoleucine-tRNA ligase, type 1 VM_11770 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding VM_11770 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain VM_11775 IPR015864 FAD synthetase VM_11775 IPR023468 Riboflavin kinase VM_11775 IPR002606 Riboflavin kinase, bacterial VM_11775 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic VM_11775 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_11775 IPR023465 Riboflavin kinase domain superfamily VM_11780 IPR004268 Peptidoglycan biosynthesis protein MurJ VM_11785 IPR036510 Ribosomal protein S20 superfamily VM_11785 IPR002583 Ribosomal protein S20 VM_11790 IPR036390 Winged helix DNA-binding domain superfamily VM_11790 IPR036388 Winged helix-like DNA-binding domain superfamily VM_11790 IPR001845 HTH ArsR-type DNA-binding domain VM_11790 IPR011991 ArsR-like helix-turn-helix domain VM_11795 IPR002559 Transposase, IS4-like VM_11795 IPR014736 Transposase, Tn5-like, core VM_11795 IPR014737 Transposase, Tn5-like, C-terminal VM_11795 IPR003201 Transposase Tn5, dimerisation VM_11795 IPR014735 Transposase, Tn5-like, N-terminal VM_11795 IPR012337 Ribonuclease H-like superfamily VM_11795 IPR038215 Transposase, Tn5-like, N-terminal domain superfamily VM_11800 IPR000847 Transcription regulator HTH, LysR VM_11800 IPR036390 Winged helix DNA-binding domain superfamily VM_11800 IPR005119 LysR, substrate-binding VM_11800 IPR036388 Winged helix-like DNA-binding domain superfamily VM_11805 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein VM_11805 IPR003841 Sodium-dependent phosphate transport protein VM_11810 IPR000398 Thymidylate synthase VM_11810 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain VM_11810 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily VM_11810 IPR020940 Thymidylate synthase, active site VM_11815 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt VM_11820 IPR002781 Transmembrane protein TauE-like VM_11825 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily VM_11825 IPR036618 PtsI, HPr-binding domain superfamily VM_11825 IPR006318 Phosphotransferase system, enzyme I-like VM_11825 IPR036637 Phosphohistidine domain superfamily VM_11825 IPR023151 PEP-utilising enzyme, conserved site VM_11825 IPR000121 PEP-utilising enzyme, C-terminal VM_11825 IPR018274 PEP-utilising enzyme, active site VM_11825 IPR008279 PEP-utilising enzyme, mobile domain VM_11825 IPR029016 GAF-like domain superfamily VM_11825 IPR003018 GAF domain VM_11825 IPR040442 Pyruvate kinase-like domain superfamily VM_11825 IPR008731 Phosphotransferase system, enzyme I N-terminal VM_11830 IPR020476 NUDIX hydrolase VM_11830 IPR015797 NUDIX hydrolase-like domain superfamily VM_11830 IPR020084 NUDIX hydrolase, conserved site VM_11830 IPR000086 NUDIX hydrolase domain VM_11830 IPR022927 RNA pyrophosphohydrolase RppH VM_11835 IPR004230 DNA mismatch repair protein MutH VM_11835 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily VM_11835 IPR011335 Restriction endonuclease type II-like VM_11835 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II VM_11840 IPR020471 Aldo/keto reductase VM_11840 IPR023210 NADP-dependent oxidoreductase domain VM_11840 IPR036812 NADP-dependent oxidoreductase domain superfamily VM_11855 IPR003593 AAA+ ATPase domain VM_11855 IPR011006 CheY-like superfamily VM_11855 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_11855 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VM_11855 IPR001789 Signal transduction response regulator, receiver domain VM_11855 IPR002078 RNA polymerase sigma factor 54 interaction domain VM_11855 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VM_11855 IPR002197 DNA binding HTH domain, Fis-type VM_11855 IPR025944 Sigma-54 interaction domain, conserved site VM_11855 IPR009057 Homeobox-like domain superfamily VM_11860 IPR006195 Aminoacyl-tRNA synthetase, class II VM_11860 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) VM_11860 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type VM_11860 IPR012340 Nucleic acid-binding, OB-fold VM_11860 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal VM_11860 IPR002313 Lysine-tRNA ligase, class II VM_11865 IPR005139 Peptide chain release factor VM_11865 IPR004374 Peptide chain release factor 2 VM_11865 IPR000352 Peptide chain release factor class I VM_11870 IPR004685 Branched-chain amino acid transport system II carrier protein VM_11880 IPR011545 DEAD/DEAH box helicase domain VM_11880 IPR028621 ATP-dependent RNA helicase SrmB VM_11880 IPR014014 RNA helicase, DEAD-box type, Q motif VM_11880 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VM_11880 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_11880 IPR001650 Helicase, C-terminal VM_11880 IPR014001 Helicase superfamily 1/2, ATP-binding domain VM_11885 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_11885 IPR009000 Translation protein, beta-barrel domain superfamily VM_11885 IPR000795 Transcription factor, GTP-binding domain VM_11885 IPR005225 Small GTP-binding protein domain VM_11885 IPR041732 Peptide chain release factor 3, GTP-binding domain VM_11885 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily VM_11885 IPR004548 Peptide chain release factor 3 VM_11885 IPR031157 Tr-type G domain, conserved site VM_11885 IPR004161 Translation elongation factor EFTu-like, domain 2 VM_11885 IPR035647 EF-G domain III/V-like VM_11885 IPR032090 Peptide chain release factor 3, C-terminal VM_11890 IPR029787 Nucleotide cyclase VM_11890 IPR005330 MHYT domain VM_11890 IPR000160 GGDEF domain VM_11890 IPR001633 EAL domain VM_11890 IPR035919 EAL domain superfamily VM_11905 IPR016181 Acyl-CoA N-acyltransferase VM_11905 IPR000182 GNAT domain VM_11915 IPR000160 GGDEF domain VM_11915 IPR005330 MHYT domain VM_11915 IPR035919 EAL domain superfamily VM_11915 IPR029787 Nucleotide cyclase VM_11915 IPR001633 EAL domain VM_11935 IPR036390 Winged helix DNA-binding domain superfamily VM_11935 IPR011991 ArsR-like helix-turn-helix domain VM_11935 IPR000835 MarR-type HTH domain VM_11935 IPR036388 Winged helix-like DNA-binding domain superfamily VM_11940 IPR014736 Transposase, Tn5-like, core VM_11940 IPR014737 Transposase, Tn5-like, C-terminal VM_11940 IPR003201 Transposase Tn5, dimerisation VM_11940 IPR012337 Ribonuclease H-like superfamily VM_11940 IPR038215 Transposase, Tn5-like, N-terminal domain superfamily VM_11940 IPR002559 Transposase, IS4-like VM_11940 IPR014735 Transposase, Tn5-like, N-terminal VM_11945 IPR023605 Lipoprotein NlpI VM_11945 IPR013026 Tetratricopeptide repeat-containing domain VM_11945 IPR019734 Tetratricopeptide repeat VM_11945 IPR011990 Tetratricopeptide-like helical domain superfamily VM_11945 IPR013105 Tetratricopeptide repeat 2 VM_11950 IPR004088 K Homology domain, type 1 VM_11950 IPR004087 K Homology domain VM_11950 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain VM_11950 IPR012162 Polyribonucleotide nucleotidyltransferase VM_11950 IPR012340 Nucleic acid-binding, OB-fold VM_11950 IPR020568 Ribosomal protein S5 domain 2-type fold VM_11950 IPR022967 RNA-binding domain, S1 VM_11950 IPR036345 Exoribonuclease, PH domain 2 superfamily VM_11950 IPR001247 Exoribonuclease, phosphorolytic domain 1 VM_11950 IPR015847 Exoribonuclease, phosphorolytic domain 2 VM_11950 IPR036612 K Homology domain, type 1 superfamily VM_11950 IPR027408 PNPase/RNase PH domain superfamily VM_11950 IPR003029 S1 domain VM_11955 IPR000589 Ribosomal protein S15 VM_11955 IPR009068 S15/NS1, RNA-binding VM_11955 IPR005290 Ribosomal protein S15, bacterial-type VM_11960 IPR002501 Pseudouridine synthase II, N-terminal VM_11960 IPR036974 PUA domain superfamily VM_11960 IPR014780 tRNA pseudouridine synthase II, TruB VM_11960 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal VM_11960 IPR032819 tRNA pseudouridylate synthase B, C-terminal VM_11960 IPR020103 Pseudouridine synthase, catalytic domain superfamily VM_11960 IPR015947 PUA-like superfamily VM_11965 IPR015946 K homology domain-like, alpha/beta VM_11965 IPR023799 Ribosome-binding factor A domain superfamily VM_11965 IPR000238 Ribosome-binding factor A VM_11965 IPR020053 Ribosome-binding factor A, conserved site VM_11970 IPR009061 Putative DNA-binding domain superfamily VM_11970 IPR013575 Initiation factor 2 associated domain, bacterial VM_11970 IPR006847 Translation initiation factor IF-2, N-terminal VM_11970 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_11970 IPR000795 Transcription factor, GTP-binding domain VM_11970 IPR000178 Translation initiation factor aIF-2, bacterial-like VM_11970 IPR015760 Translation initiation factor IF- 2 VM_11970 IPR005225 Small GTP-binding protein domain VM_11970 IPR023115 Translation initiation factor IF- 2, domain 3 VM_11970 IPR009000 Translation protein, beta-barrel domain superfamily VM_11970 IPR036925 Translation initiation factor IF-2, domain 3 superfamily VM_11975 IPR003029 S1 domain VM_11975 IPR022967 RNA-binding domain, S1 VM_11975 IPR036555 NusA, N-terminal domain superfamily VM_11975 IPR013735 Transcription factor NusA, N-terminal VM_11975 IPR010213 Transcription termination factor NusA VM_11975 IPR012340 Nucleic acid-binding, OB-fold VM_11975 IPR009019 K homology domain superfamily, prokaryotic type VM_11975 IPR010214 Transcription termination factor NusA, C-terminal duplication VM_11975 IPR025249 KH domain, NusA-like VM_11975 IPR015946 K homology domain-like, alpha/beta VM_11975 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical VM_11975 IPR030842 Transcription termination/antitermination protein NusA, bacterial VM_11980 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily VM_11980 IPR028989 Ribosome maturation factor RimP, N-terminal VM_11980 IPR028998 Ribosome maturation factor RimP, C-terminal VM_11980 IPR003728 Ribosome maturation factor RimP VM_11980 IPR035956 RimP, N-terminal domain superfamily VM_11995 IPR004692 Preprotein translocase SecG subunit VM_12005 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily VM_12005 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I VM_12005 IPR005843 Alpha-D-phosphohexomutase, C-terminal VM_12005 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III VM_12005 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III VM_12005 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II VM_12005 IPR006352 Phosphoglucosamine mutase, bacterial type VM_12005 IPR005841 Alpha-D-phosphohexomutase superfamily VM_12005 IPR016066 Alpha-D-phosphohexomutase, conserved site VM_12010 IPR011005 Dihydropteroate synthase-like VM_12010 IPR000489 Pterin-binding domain VM_12010 IPR006390 Dihydropteroate synthase VM_12015 IPR003960 ATPase, AAA-type, conserved site VM_12015 IPR011546 Peptidase M41, FtsH extracellular VM_12015 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_12015 IPR003959 ATPase, AAA-type, core VM_12015 IPR003593 AAA+ ATPase domain VM_12015 IPR000642 Peptidase M41 VM_12015 IPR037219 Peptidase M41-like VM_12015 IPR005936 Peptidase, FtsH VM_12015 IPR041569 AAA ATPase, AAA+ lid domain VM_12020 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VM_12020 IPR002877 Ribosomal RNA methyltransferase FtsJ domain VM_12020 IPR015507 Ribosomal RNA large subunit methyltransferase E VM_12025 IPR035920 YhbY-like superfamily VM_12025 IPR017924 RNA-binding protein YhbY VM_12025 IPR001890 RNA-binding, CRM domain VM_12030 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal VM_12030 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily VM_12030 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal VM_12030 IPR023459 Transcription elongation factor GreA/GreB family VM_12030 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily VM_12030 IPR018151 Transcription elongation factor, GreA/GreB, conserved site VM_12030 IPR028624 Transcription elongation factor GreA/GreB VM_12030 IPR006359 Transcription elongation factor GreA VM_12035 IPR023614 Porin domain superfamily VM_12035 IPR033900 Porin domain, Gram-negative type VM_12040 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C VM_12040 IPR012338 Beta-lactamase/transpeptidase-like VM_12045 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 VM_12045 IPR024088 Tyrosine-tRNA ligase, bacterial-type VM_12045 IPR036986 RNA-binding S4 domain superfamily VM_12045 IPR002307 Tyrosine-tRNA ligase VM_12045 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site VM_12045 IPR002942 RNA-binding S4 domain VM_12045 IPR002305 Aminoacyl-tRNA synthetase, class Ic VM_12045 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_12050 IPR011055 Duplicated hybrid motif VM_12050 IPR007340 Opacity-associated protein A VM_12050 IPR016047 Peptidase M23 VM_12055 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VM_12055 IPR001036 Acriflavin resistance protein VM_12065 IPR035903 HesB-like domain superfamily VM_12065 IPR023063 FeS cluster insertion protein ErpA VM_12065 IPR017870 FeS cluster insertion, C-terminal, conserved site VM_12065 IPR016092 FeS cluster insertion protein VM_12065 IPR000361 FeS cluster biogenesis VM_12075 IPR015424 Pyridoxal phosphate-dependent transferase VM_12075 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VM_12075 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VM_12075 IPR005814 Aminotransferase class-III VM_12075 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase VM_12085 IPR002549 Transmembrane protein TqsA-like VM_12090 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VM_12090 IPR002052 DNA methylase, N-6 adenine-specific, conserved site VM_12090 IPR013675 Methyltransferase small, N-terminal VM_12090 IPR023543 rRNA small subunit methyltransferase C VM_12090 IPR007848 Methyltransferase small domain VM_12095 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VM_12095 IPR036641 HPT domain superfamily VM_12095 IPR003660 HAMP domain VM_12095 IPR033414 Periplasmic sensor domain VM_12095 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VM_12095 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VM_12095 IPR005467 Histidine kinase domain VM_12095 IPR001789 Signal transduction response regulator, receiver domain VM_12095 IPR011006 CheY-like superfamily VM_12095 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain VM_12095 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_12095 IPR003594 Histidine kinase/HSP90-like ATPase VM_12100 IPR000914 Solute-binding protein family 5 domain VM_12100 IPR023765 Solute-binding protein family 5, conserved site VM_12100 IPR039424 Solute-binding protein family 5 VM_12100 IPR030678 Peptide/nickel binding protein, MppA-type VM_12105 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VM_12105 IPR035906 MetI-like superfamily VM_12110 IPR035906 MetI-like superfamily VM_12110 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VM_12110 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VM_12115 IPR003439 ABC transporter-like VM_12115 IPR017871 ABC transporter, conserved site VM_12115 IPR003593 AAA+ ATPase domain VM_12115 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_12115 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal VM_12120 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal VM_12120 IPR017871 ABC transporter, conserved site VM_12120 IPR003439 ABC transporter-like VM_12120 IPR003593 AAA+ ATPase domain VM_12120 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_12130 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type VM_12135 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal VM_12135 IPR029018 Beta-hexosaminidase-like, domain 2 VM_12135 IPR017853 Glycoside hydrolase superfamily VM_12135 IPR025705 Beta-hexosaminidase VM_12135 IPR015883 Glycoside hydrolase family 20, catalytic domain VM_12140 IPR008928 Six-hairpin glycosidase superfamily VM_12140 IPR012341 Six-hairpin glycosidase-like superfamily VM_12140 IPR009342 Putative carbohydrate binding domain VM_12140 IPR011013 Galactose mutarotase-like domain superfamily VM_12140 IPR033432 Glycosyl hydrolase 36, catalytic domain VM_12140 IPR037828 N,N'-diacetylchitobiose phosphorylase, N-terminal VM_12140 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily VM_12140 IPR010383 Glycosyl hydrolase 94 VM_12145 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I VM_12145 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III VM_12145 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II VM_12145 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III VM_12145 IPR005843 Alpha-D-phosphohexomutase, C-terminal VM_12145 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily VM_12145 IPR016066 Alpha-D-phosphohexomutase, conserved site VM_12145 IPR005841 Alpha-D-phosphohexomutase superfamily VM_12150 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit VM_12150 IPR013611 Transport-associated OB, type 2 VM_12150 IPR003593 AAA+ ATPase domain VM_12150 IPR008995 Molybdate/tungstate binding, C-terminal VM_12150 IPR017871 ABC transporter, conserved site VM_12150 IPR003439 ABC transporter-like VM_12150 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA VM_12150 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_12155 IPR011867 Molybdate ABC transporter, permease protein VM_12155 IPR035906 MetI-like superfamily VM_12155 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VM_12160 IPR006059 Bacterial extracellular solute-binding protein VM_12160 IPR026045 Ferric binding protein VM_12165 IPR018047 Ammonium transporter, conserved site VM_12165 IPR001905 Ammonium transporter VM_12165 IPR029020 Ammonium/urea transporter VM_12165 IPR024041 Ammonium transporter AmtB-like domain VM_12170 IPR017918 Nitrogen regulatory protein PII, conserved site VM_12170 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VM_12170 IPR002332 Nitrogen regulatory protein P-II, urydylation site VM_12170 IPR011322 Nitrogen regulatory PII-like, alpha/beta VM_12170 IPR002187 Nitrogen regulatory protein PII VM_12175 IPR008249 Uncharacterised protein family UPF0231 VM_12180 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain VM_12180 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 VM_12180 IPR015929 Aconitase B, swivel VM_12180 IPR036288 Aconitase B, HEAT-like domain superfamily VM_12180 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VM_12180 IPR015933 Aconitase B, HEAT-like domain VM_12180 IPR004406 Aconitase B VM_12180 IPR015932 Aconitase, domain 2 VM_12180 IPR036008 Aconitase, iron-sulfur domain VM_12180 IPR018136 Aconitase family, 4Fe-4S cluster binding site VM_12185 IPR002641 Patatin-like phospholipase domain VM_12185 IPR001423 Lysophospholipase patatin, conserved site VM_12185 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VM_12190 IPR023346 Lysozyme-like domain superfamily VM_12190 IPR036950 Penicillin binding protein transglycosylase domain VM_12190 IPR028166 Bifunctional transglycosylase second domain VM_12190 IPR011813 Penicillin-binding protein 1B VM_12190 IPR001460 Penicillin-binding protein, transpeptidase VM_12190 IPR012338 Beta-lactamase/transpeptidase-like VM_12190 IPR001264 Glycosyl transferase, family 51 VM_12195 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal VM_12195 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_12195 IPR010225 ATP-dependent helicase HrpB VM_12195 IPR001650 Helicase, C-terminal VM_12195 IPR014001 Helicase superfamily 1/2, ATP-binding domain VM_12195 IPR007502 Helicase-associated domain VM_12195 IPR011545 DEAD/DEAH box helicase domain VM_12200 IPR005224 Sugar fermentation stimulation protein VM_12200 IPR041465 SfsA, N-terminal OB domain VM_12200 IPR040452 Sugar fermentation stimulation protein, C-terminal VM_12205 IPR037187 DksA, N-terminal domain superfamily VM_12205 IPR000962 Zinc finger, DksA/TraR C4-type VM_12205 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria VM_12205 IPR020458 Zinc finger, DksA/TraR C4-type conserved site VM_12205 IPR012784 RNA polymerase-binding transcription factor DksA VM_12210 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_12210 IPR022380 Glutamyl-Q tRNA(Asp) synthetase VM_12210 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain VM_12210 IPR000924 Glutamyl/glutaminyl-tRNA synthetase VM_12215 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain VM_12215 IPR002646 Poly A polymerase, head domain VM_12215 IPR025866 Polymerase A arginine-rich C-terminal domain VM_12215 IPR010206 Poly(A) polymerase I VM_12220 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily VM_12220 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK VM_12225 IPR040442 Pyruvate kinase-like domain superfamily VM_12225 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily VM_12225 IPR003700 Ketopantoate hydroxymethyltransferase VM_12230 IPR004821 Cytidyltransferase-like domain VM_12230 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain VM_12230 IPR003721 Pantoate-beta-alanine ligase VM_12230 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_12235 IPR013525 ABC-2 type transporter VM_12235 IPR000412 ABC-2 transporter VM_12240 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_12240 IPR017871 ABC transporter, conserved site VM_12240 IPR003439 ABC transporter-like VM_12240 IPR003593 AAA+ ATPase domain VM_12245 IPR002645 STAS domain VM_12245 IPR001902 SLC26A/SulP transporter VM_12245 IPR011547 SLC26A/SulP transporter domain VM_12245 IPR036513 STAS domain superfamily VM_12250 IPR036874 Carbonic anhydrase superfamily VM_12250 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site VM_12250 IPR001765 Carbonic anhydrase VM_12255 IPR029057 Phosphoribosyltransferase-like VM_12255 IPR000836 Phosphoribosyltransferase domain VM_12255 IPR005904 Hypoxanthine phosphoribosyl transferase VM_12260 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VM_12260 IPR009057 Homeobox-like domain superfamily VM_12260 IPR001647 DNA-binding HTH domain, TetR-type VM_12265 IPR018063 SAM-dependent methyltransferase RsmI, conserved site VM_12265 IPR000878 Tetrapyrrole methylase VM_12265 IPR008189 rRNA small subunit methyltransferase I VM_12265 IPR014776 Tetrapyrrole methylase, subdomain 2 VM_12265 IPR035996 Tetrapyrrole methylase superfamily VM_12265 IPR014777 Tetrapyrrole methylase, subdomain 1 VM_12270 IPR028082 Periplasmic binding protein-like I VM_12270 IPR011990 Tetratricopeptide-like helical domain superfamily VM_12270 IPR007443 Penicillin-binding protein activator LpoA VM_12275 IPR011856 tRNA endonuclease-like domain superfamily VM_12275 IPR011335 Restriction endonuclease type II-like VM_12275 IPR003509 Uncharacterised protein family UPF0102 VM_12280 IPR023070 DnaA initiator-associating protein VM_12280 IPR035461 GmhA/DiaA VM_12280 IPR001347 Sugar isomerase (SIS) VM_12285 IPR014004 Transport-associated and nodulation domain, bacteria VM_12285 IPR007055 BON domain VM_12290 IPR007481 Stringent starvation protein B VM_12290 IPR036760 SspB-like superfamily VM_12295 IPR036249 Thioredoxin-like superfamily VM_12295 IPR004046 Glutathione S-transferase, C-terminal VM_12295 IPR040079 Glutathione Transferase family VM_12295 IPR010987 Glutathione S-transferase, C-terminal-like VM_12295 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VM_12295 IPR034341 Stringent starvation protein A, N-terminal VM_12295 IPR004045 Glutathione S-transferase, N-terminal VM_12300 IPR009056 Cytochrome c-like domain VM_12300 IPR036909 Cytochrome c-like domain superfamily VM_12300 IPR002326 Cytochrome c1 VM_12305 IPR016174 Di-haem cytochrome, transmembrane VM_12305 IPR005798 Cytochrome b/b6, C-terminal VM_12305 IPR036150 Cytochrome b/b6, C-terminal domain superfamily VM_12305 IPR005797 Cytochrome b/b6, N-terminal VM_12305 IPR027387 Cytochrome b/b6-like domain superfamily VM_12305 IPR030689 Cytochrome b VM_12310 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal VM_12310 IPR014349 Rieske iron-sulphur protein VM_12310 IPR017941 Rieske [2Fe-2S] iron-sulphur domain VM_12310 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily VM_12310 IPR005805 Rieske iron-sulphur protein, C-terminal VM_12310 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit VM_12315 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VM_12315 IPR000754 Ribosomal protein S9 VM_12315 IPR023035 Ribosomal protein S9, bacterial/plastid VM_12315 IPR020574 Ribosomal protein S9, conserved site VM_12315 IPR020568 Ribosomal protein S5 domain 2-type fold VM_12320 IPR005822 Ribosomal protein L13 VM_12320 IPR023563 Ribosomal protein L13, conserved site VM_12320 IPR036899 Ribosomal protein L13 superfamily VM_12320 IPR005823 Ribosomal protein L13, bacterial-type VM_12330 IPR005654 ATPase, AFG1-like VM_12330 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_12330 IPR030870 Cell division protein ZapE VM_12340 IPR001940 Peptidase S1C VM_12340 IPR036034 PDZ superfamily VM_12340 IPR011782 Peptidase S1C, Do VM_12340 IPR009003 Peptidase S1, PA clan VM_12340 IPR001478 PDZ domain VM_12345 IPR011783 Peptidase S1C, DegS VM_12345 IPR036034 PDZ superfamily VM_12345 IPR009003 Peptidase S1, PA clan VM_12345 IPR001940 Peptidase S1C VM_12345 IPR001478 PDZ domain VM_12350 IPR038657 Ribosomal protein L19 superfamily VM_12350 IPR001857 Ribosomal protein L19 VM_12350 IPR018257 Ribosomal protein L19, conserved site VM_12350 IPR008991 Translation protein SH3-like domain superfamily VM_12355 IPR029028 Alpha/beta knot methyltransferases VM_12355 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria VM_12355 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VM_12355 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain VM_12355 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal VM_12360 IPR009000 Translation protein, beta-barrel domain superfamily VM_12360 IPR036976 RimM, N-terminal domain superfamily VM_12360 IPR002676 RimM, N-terminal VM_12360 IPR011033 PRC-barrel-like superfamily VM_12360 IPR027275 PRC-barrel domain VM_12360 IPR011961 16S rRNA processing protein RimM VM_12365 IPR023803 Ribosomal protein S16 domain superfamily VM_12365 IPR020592 Ribosomal protein S16, conserved site VM_12365 IPR000307 Ribosomal protein S16 VM_12370 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily VM_12370 IPR003593 AAA+ ATPase domain VM_12370 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily VM_12370 IPR004125 Signal recognition particle, SRP54 subunit, M-domain VM_12370 IPR022941 Signal recognition particle, SRP54 subunit VM_12370 IPR013822 Signal recognition particle SRP54, helical bundle VM_12370 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_12370 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain VM_12370 IPR004780 Signal recognition particle protein VM_12375 IPR002541 Cytochrome c assembly protein VM_12380 IPR002550 CNNM, transmembrane domain VM_12380 IPR000644 CBS domain VM_12380 IPR036318 FAD-binding, type PCMH-like superfamily VM_12380 IPR016169 FAD-binding, type PCMH, subdomain 2 VM_12380 IPR005170 Transporter-associated domain VM_12385 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like VM_12385 IPR003815 S-ribosylhomocysteinase (LuxS) VM_12385 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily VM_12390 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain VM_12390 IPR007370 Glutamate--cysteine ligase VM_12390 IPR006334 Glutamate--cysteine ligase, monofunctional VM_12395 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like VM_12395 IPR007863 Peptidase M16, C-terminal VM_12395 IPR011765 Peptidase M16, N-terminal VM_12395 IPR001431 Peptidase M16, zinc-binding site VM_12400 IPR032816 SNARE associated Golgi protein VM_12405 IPR013154 Alcohol dehydrogenase, N-terminal VM_12405 IPR013149 Alcohol dehydrogenase, C-terminal VM_12405 IPR020843 Polyketide synthase, enoylreductase domain VM_12405 IPR036291 NAD(P)-binding domain superfamily VM_12405 IPR011032 GroES-like superfamily VM_12410 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit VM_12415 IPR001882 Biotin-binding site VM_12415 IPR000089 Biotin/lipoyl attachment VM_12415 IPR003379 Carboxylase, conserved domain VM_12415 IPR011053 Single hybrid motif VM_12415 IPR005776 Oxaloacetate decarboxylase, alpha subunit VM_12415 IPR000891 Pyruvate carboxyltransferase VM_12415 IPR013785 Aldolase-type TIM barrel VM_12420 IPR005899 Sodium ion-translocating decarboxylase VM_12420 IPR023424 Oxaloacetate decarboxylase gamma chain, probable VM_12465 IPR036107 Carbon storage regulator superfamily VM_12465 IPR003751 Translational regulator CsrA VM_12470 IPR001341 Aspartate kinase VM_12470 IPR001048 Aspartate/glutamate/uridylate kinase VM_12470 IPR041740 Aspartokinase catalytic domain VM_12470 IPR027795 CASTOR, ACT domain VM_12470 IPR002912 ACT domain VM_12470 IPR036393 Acetylglutamate kinase-like superfamily VM_12470 IPR018042 Aspartate kinase, conserved site VM_12470 IPR005260 Aspartate kinase, monofunctional class VM_12475 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain VM_12475 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal VM_12475 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria VM_12475 IPR003156 DHHA1 domain VM_12475 IPR002318 Alanine-tRNA ligase, class IIc VM_12475 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily VM_12475 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily VM_12475 IPR009000 Translation protein, beta-barrel domain superfamily VM_12475 IPR012947 Threonyl/alanyl tRNA synthetase, SAD VM_12480 IPR036388 Winged helix-like DNA-binding domain superfamily VM_12480 IPR003783 Regulatory protein RecX VM_12485 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface VM_12485 IPR013765 DNA recombination and repair protein RecA VM_12485 IPR003593 AAA+ ATPase domain VM_12485 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_12485 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain VM_12485 IPR023400 DNA recombination and repair protein RecA, C-terminal VM_12485 IPR020584 DNA recombination/repair protein RecA, conserved site VM_12490 IPR008136 CinA, C-terminal VM_12490 IPR036653 CinA-like, C-terminal VM_12495 IPR003439 ABC transporter-like VM_12495 IPR024765 TOBE-like domain VM_12495 IPR005666 Sulphate transport system permease protein 1 VM_12495 IPR003593 AAA+ ATPase domain VM_12495 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_12495 IPR008995 Molybdate/tungstate binding, C-terminal VM_12495 IPR017871 ABC transporter, conserved site VM_12495 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal VM_12500 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VM_12500 IPR035906 MetI-like superfamily VM_12500 IPR005667 Sulphate ABC transporter permease protein 2 VM_12500 IPR011866 Sulphate ABC transporter, permease protein CysW VM_12505 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VM_12505 IPR005667 Sulphate ABC transporter permease protein 2 VM_12505 IPR035906 MetI-like superfamily VM_12505 IPR011865 Sulphate ABC transporter, permease protein CysT VM_12510 IPR034408 Sulphate/thiosulphate-binding site VM_12510 IPR005669 Thiosulphate/Sulfate-binding protein VM_12510 IPR000957 Sulphate/thiosulphate-binding, conserved site VM_12515 IPR005858 Cysteine synthase CysM VM_12515 IPR005856 Cysteine synthase VM_12515 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site VM_12515 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VM_12515 IPR001926 Pyridoxal-phosphate dependent enzyme VM_12520 IPR005748 DNA mismatch repair protein MutS VM_12520 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_12520 IPR036678 MutS, connector domain superfamily VM_12520 IPR007860 DNA mismatch repair protein MutS, connector domain VM_12520 IPR016151 DNA mismatch repair protein MutS, N-terminal VM_12520 IPR036187 DNA mismatch repair protein MutS, core domain superfamily VM_12520 IPR007861 DNA mismatch repair protein MutS, clamp VM_12520 IPR000432 DNA mismatch repair protein MutS, C-terminal VM_12520 IPR017261 DNA mismatch repair protein MutS/MSH VM_12520 IPR007695 DNA mismatch repair protein MutS-like, N-terminal VM_12520 IPR007696 DNA mismatch repair protein MutS, core VM_12525 IPR009042 RNA polymerase sigma-70 region 1.2 VM_12525 IPR000943 RNA polymerase sigma-70 VM_12525 IPR007624 RNA polymerase sigma-70 region 3 VM_12525 IPR007630 RNA polymerase sigma-70 region 4 VM_12525 IPR013325 RNA polymerase sigma factor, region 2 VM_12525 IPR013324 RNA polymerase sigma factor, region 3/4-like VM_12525 IPR014284 RNA polymerase sigma-70 like domain VM_12525 IPR012761 RNA polymerase sigma factor RpoS VM_12525 IPR007627 RNA polymerase sigma-70 region 2 VM_12525 IPR036388 Winged helix-like DNA-binding domain superfamily VM_12530 IPR016047 Peptidase M23 VM_12530 IPR036779 LysM domain superfamily VM_12530 IPR018392 LysM domain VM_12530 IPR011055 Duplicated hybrid motif VM_12535 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VM_12535 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase VM_12540 IPR036523 SurE-like phosphatase/nucleotidase superfamily VM_12540 IPR002828 Survival protein SurE-like phosphatase/nucleotidase VM_12540 IPR030048 Survival protein SurE VM_12545 IPR042214 Pseudouridine synthase, TruD, catalytic domain VM_12545 IPR020103 Pseudouridine synthase, catalytic domain superfamily VM_12545 IPR001656 Pseudouridine synthase, TruD VM_12545 IPR020119 Pseudouridine synthase TruD, conserved site VM_12545 IPR011760 Pseudouridine synthase, TruD, insertion domain VM_12550 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase VM_12550 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily VM_12550 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site VM_12555 IPR029044 Nucleotide-diphospho-sugar transferases VM_12555 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site VM_12555 IPR034683 Cytidylyltransferase IspD/TarI VM_12555 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase VM_12560 IPR007060 Septum formation initiator FtsL/DivIC VM_12560 IPR023081 Cell division protein FtsB VM_12565 IPR003824 Undecaprenyl-diphosphatase UppP VM_12570 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK VM_12570 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily VM_12575 IPR006156 Dihydroneopterin aldolase VM_12575 IPR006157 Dihydroneopterin aldolase/epimerase domain VM_12585 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY VM_12590 IPR029058 Alpha/Beta hydrolase fold VM_12590 IPR000073 Alpha/beta hydrolase fold-1 VM_12590 IPR019913 Pyrimidine utilisation protein RutD VM_12595 IPR017860 Peptidase M22, conserved site VM_12595 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD VM_12595 IPR017861 Kae1/TsaD family VM_12595 IPR000905 Gcp-like domain VM_12600 IPR038380 Ribosomal protein S21 superfamily VM_12600 IPR018278 Ribosomal protein S21, conserved site VM_12600 IPR001911 Ribosomal protein S21 VM_12605 IPR042184 YqeY/Aim41, N-terminal domain VM_12605 IPR019004 Uncharacterised protein YqeY/Aim41 VM_12605 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 VM_12605 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like VM_12610 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal VM_12610 IPR002694 Zinc finger, CHC2-type VM_12610 IPR006171 TOPRIM domain VM_12610 IPR013264 DNA primase, catalytic core, N-terminal VM_12610 IPR030846 DNA primase DnaG, bacteria VM_12610 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily VM_12610 IPR036977 DNA Primase, CHC2-type zinc finger VM_12610 IPR019475 DNA primase, DnaB-helicase binding domain VM_12610 IPR006295 DNA primase, DnaG VM_12610 IPR034151 Bacterial DnaG primase, TOPRIM domain VM_12610 IPR013173 DNA primase DnaG, DnaB-binding domain VM_12615 IPR007627 RNA polymerase sigma-70 region 2 VM_12615 IPR009042 RNA polymerase sigma-70 region 1.2 VM_12615 IPR000943 RNA polymerase sigma-70 VM_12615 IPR014284 RNA polymerase sigma-70 like domain VM_12615 IPR007624 RNA polymerase sigma-70 region 3 VM_12615 IPR028630 RNA polymerase sigma factor RpoD VM_12615 IPR007631 RNA polymerase sigma factor 70, non-essential domain VM_12615 IPR007127 RNA polymerase sigma factor 70, region 1.1 VM_12615 IPR042189 Sigma-70 factor, region 1.1 superfamily VM_12615 IPR013324 RNA polymerase sigma factor, region 3/4-like VM_12615 IPR012760 RNA polymerase sigma factor RpoD, C-terminal VM_12615 IPR007630 RNA polymerase sigma-70 region 4 VM_12615 IPR013325 RNA polymerase sigma factor, region 2 VM_12615 IPR036388 Winged helix-like DNA-binding domain superfamily VM_12625 IPR025166 Integrase, DNA-binding domain VM_12625 IPR011010 DNA breaking-rejoining enzyme, catalytic core VM_12625 IPR010998 Integrase/recombinase, N-terminal VM_12625 IPR002104 Integrase, catalytic domain VM_12625 IPR038488 Integrase, DNA-binding domain superfamily VM_12625 IPR013762 Integrase-like, catalytic domain superfamily VM_12680 IPR010652 Domain of unknown function DUF1232 VM_12695 IPR020891 Uncharacterised protein family UPF0758, conserved site VM_12695 IPR037518 MPN domain VM_12695 IPR001405 Uncharacterised protein family UPF0758 VM_12695 IPR025657 RadC-like JAB domain VM_12700 IPR003346 Transposase, IS116/IS110/IS902 VM_12700 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal VM_12770 IPR016185 Pre-ATP-grasp domain superfamily VM_12770 IPR013815 ATP-grasp fold, subdomain 1 VM_12770 IPR011127 D-alanine--D-alanine ligase, N-terminal domain VM_12770 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site VM_12770 IPR011761 ATP-grasp fold VM_12770 IPR011095 D-alanine--D-alanine ligase, C-terminal VM_12770 IPR005905 D-alanine--D-alanine ligase VM_12775 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_12775 IPR041546 ClpA/ClpB, AAA lid domain VM_12775 IPR018368 ClpA/B, conserved site 1 VM_12775 IPR001270 ClpA/B family VM_12775 IPR004176 Clp, N-terminal VM_12775 IPR036628 Clp, N-terminal domain superfamily VM_12775 IPR017729 Type VI secretion system, ATPase ClpV1 VM_12775 IPR003959 ATPase, AAA-type, core VM_12775 IPR019489 Clp ATPase, C-terminal VM_12775 IPR003593 AAA+ ATPase domain VM_12825 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein VM_12825 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset VM_12825 IPR006531 Gp5 N-terminal VM_12825 IPR037026 Vgr protein, OB-fold domain superfamily VM_12840 IPR018060 DNA binding HTH domain, AraC-type VM_12840 IPR041522 CdaR, GGDEF-like domain VM_12840 IPR009057 Homeobox-like domain superfamily VM_12860 IPR011010 DNA breaking-rejoining enzyme, catalytic core VM_12860 IPR023009 Tyrosine recombinase XerC/XerD VM_12860 IPR013762 Integrase-like, catalytic domain superfamily VM_12860 IPR011931 Tyrosine recombinase XerC VM_12860 IPR002104 Integrase, catalytic domain VM_12860 IPR010998 Integrase/recombinase, N-terminal VM_12860 IPR004107 Integrase, SAM-like, N-terminal VM_12915 IPR026881 WYL domain VM_12915 IPR018356 Transcription regulator, HTH DeoR-type, conserved site VM_12915 IPR001034 DeoR-type HTH domain VM_12930 IPR041722 Alpha-keto acid binding periplasmic protein VM_12930 IPR018389 TRAP transporter solute receptor DctP/TeaA VM_12930 IPR026289 Solute binding protein, TakP-like VM_12930 IPR038404 TRAP transporter solute receptor DctP superfamily VM_12935 IPR035466 GlmS/AgaS, SIS domain 1 VM_12935 IPR035490 GlmS/FrlB, SIS domain 2 VM_12935 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising VM_12935 IPR029055 Nucleophile aminohydrolases, N-terminal VM_12935 IPR001347 Sugar isomerase (SIS) VM_12935 IPR017932 Glutamine amidotransferase type 2 domain VM_12940 IPR018356 Transcription regulator, HTH DeoR-type, conserved site VM_12940 IPR036388 Winged helix-like DNA-binding domain superfamily VM_12940 IPR037171 NagB/RpiA transferase-like VM_12940 IPR001034 DeoR-type HTH domain VM_12940 IPR036390 Winged helix DNA-binding domain superfamily VM_12940 IPR014036 DeoR C-terminal sensor domain VM_12945 IPR036918 Pyruvate kinase, C-terminal domain superfamily VM_12945 IPR001697 Pyruvate kinase VM_12945 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily VM_12945 IPR040442 Pyruvate kinase-like domain superfamily VM_12945 IPR011037 Pyruvate kinase-like, insert domain superfamily VM_12945 IPR018209 Pyruvate kinase, active site VM_12945 IPR015793 Pyruvate kinase, barrel VM_12945 IPR015806 Pyruvate kinase, insert domain superfamily VM_12945 IPR015795 Pyruvate kinase, C-terminal VM_12950 IPR007497 Protein of unknown function DUF541 VM_12955 IPR036390 Winged helix DNA-binding domain superfamily VM_12955 IPR017685 HTH-type transcriptional regulator ArgP VM_12955 IPR000847 Transcription regulator HTH, LysR VM_12955 IPR005119 LysR, substrate-binding VM_12955 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria VM_12955 IPR036388 Winged helix-like DNA-binding domain superfamily VM_12960 IPR004777 L-lysine exporter/arginine exporter VM_12960 IPR023445 Arginine exporter protein ArgO, enterobacteria VM_12960 IPR001123 Amino acid exporter protein, LeuE-type VM_12965 IPR008910 Conserved TM helix VM_12965 IPR006685 Mechanosensitive ion channel MscS VM_12965 IPR023408 Mechanosensitive ion channel MscS domain superfamily VM_12965 IPR006686 Mechanosensitive ion channel MscS, conserved site VM_12965 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 VM_12965 IPR010920 LSM domain superfamily VM_12965 IPR011066 Mechanosensitive ion channel MscS, C-terminal VM_12970 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype VM_12970 IPR000771 Fructose-bisphosphate aldolase, class-II VM_12970 IPR013785 Aldolase-type TIM barrel VM_12975 IPR015824 Phosphoglycerate kinase, N-terminal VM_12975 IPR015911 Phosphoglycerate kinase, conserved site VM_12975 IPR001576 Phosphoglycerate kinase VM_12975 IPR036043 Phosphoglycerate kinase superfamily VM_12980 IPR036291 NAD(P)-binding domain superfamily VM_12980 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain VM_12980 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family VM_12980 IPR006422 D-erythrose-4-phosphate dehydrogenase VM_12980 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain VM_12985 IPR039426 Vitamin B12 transporter BtuB-like VM_12985 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VM_12985 IPR010916 TonB box, conserved site VM_12985 IPR037066 TonB-dependent receptor, plug domain superfamily VM_12985 IPR010917 TonB-dependent receptor, conserved site VM_12985 IPR012910 TonB-dependent receptor, plug domain VM_12985 IPR000531 TonB-dependent receptor-like, beta-barrel VM_12990 IPR005119 LysR, substrate-binding VM_12990 IPR000847 Transcription regulator HTH, LysR VM_12990 IPR036390 Winged helix DNA-binding domain superfamily VM_12990 IPR036388 Winged helix-like DNA-binding domain superfamily VM_12995 IPR029061 Thiamin diphosphate-binding fold VM_12995 IPR005474 Transketolase, N-terminal VM_12995 IPR033248 Transketolase, C-terminal domain VM_12995 IPR020826 Transketolase binding site VM_12995 IPR033247 Transketolase family VM_12995 IPR005478 Transketolase, bacterial-like VM_12995 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II VM_12995 IPR005475 Transketolase-like, pyrimidine-binding domain VM_13005 IPR002133 S-adenosylmethionine synthetase VM_13005 IPR022636 S-adenosylmethionine synthetase superfamily VM_13005 IPR022631 S-adenosylmethionine synthetase, conserved site VM_13005 IPR022629 S-adenosylmethionine synthetase, central domain VM_13005 IPR022630 S-adenosylmethionine synthetase, C-terminal VM_13005 IPR022628 S-adenosylmethionine synthetase, N-terminal VM_13010 IPR035240 SprT-like, zinc ribbon domain VM_13010 IPR023483 Uncharacterised protein family SprT VM_13010 IPR006640 SprT-like VM_13015 IPR007346 Endonuclease I VM_13020 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VM_13020 IPR029028 Alpha/beta knot methyltransferases VM_13020 IPR006700 Ribosomal RNA small subunit methyltransferase E VM_13020 IPR015947 PUA-like superfamily VM_13025 IPR004215 Prokaryotic glutathione synthetase, N-terminal VM_13025 IPR016185 Pre-ATP-grasp domain superfamily VM_13025 IPR011761 ATP-grasp fold VM_13025 IPR013815 ATP-grasp fold, subdomain 1 VM_13025 IPR004218 Prokaryotic glutathione synthetase, ATP-binding VM_13025 IPR006284 Glutathione synthetase, prokaryotic VM_13030 IPR003774 Protein of unknown function UPF0301 VM_13035 IPR006641 YqgF/RNase H-like domain VM_13035 IPR037027 YqgF/RNase H-like domain superfamily VM_13035 IPR005227 Putative pre-16S rRNA nuclease VM_13035 IPR012337 Ribonuclease H-like superfamily VM_13040 IPR002942 RNA-binding S4 domain VM_13040 IPR002307 Tyrosine-tRNA ligase VM_13040 IPR036986 RNA-binding S4 domain superfamily VM_13040 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_13040 IPR002305 Aminoacyl-tRNA synthetase, class Ic VM_13040 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 VM_13040 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site VM_13040 IPR024088 Tyrosine-tRNA ligase, bacterial-type VM_13050 IPR001482 Type II/IV secretion system protein VM_13050 IPR003593 AAA+ ATPase domain VM_13050 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_13050 IPR006321 Pilus retraction protein PilT VM_13055 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_13055 IPR006321 Pilus retraction protein PilT VM_13055 IPR003593 AAA+ ATPase domain VM_13055 IPR001482 Type II/IV secretion system protein VM_13060 IPR011078 Pyridoxal phosphate homeostasis protein VM_13060 IPR029066 PLP-binding barrel VM_13060 IPR001608 Alanine racemase, N-terminal VM_13065 IPR036291 NAD(P)-binding domain superfamily VM_13065 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain VM_13065 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily VM_13065 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal VM_13065 IPR000304 Pyrroline-5-carboxylate reductase VM_13070 IPR003425 CCB3/YggT VM_13075 IPR036591 YggU-like superfamily VM_13075 IPR005228 Conserved hypothetical protein CHP00251 VM_13075 IPR003746 Protein of unknown function DUF167 VM_13085 IPR002637 Ham1-like protein VM_13085 IPR020922 dITP/XTP pyrophosphatase VM_13085 IPR029001 Inosine triphosphate pyrophosphatase-like VM_13090 IPR007197 Radical SAM VM_13090 IPR004559 Heme chaperone HemW-like VM_13090 IPR023404 Radical SAM, alpha/beta horseshoe VM_13090 IPR010723 HemN, C-terminal VM_13090 IPR006638 Elp3/MiaB/NifB VM_13090 IPR034505 Anaerobic coproporphyrinogen-III oxidase VM_13100 IPR015868 Glutaminase VM_13100 IPR012338 Beta-lactamase/transpeptidase-like VM_13105 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VM_13105 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type VM_13110 IPR015797 NUDIX hydrolase-like domain superfamily VM_13110 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal VM_13110 IPR029119 MutY, C-terminal VM_13110 IPR000445 Helix-hairpin-helix motif VM_13110 IPR004036 Endonuclease III-like, conserved site-2 VM_13110 IPR004035 Endonuclease III, iron-sulphur binding site VM_13110 IPR005760 A/G-specific adenine glycosylase MutY VM_13110 IPR011257 DNA glycosylase VM_13110 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif VM_13110 IPR003265 HhH-GPD domain VM_13115 IPR036766 Fe(II) trafficking protein YggX superfamily VM_13115 IPR007457 Fe(II) trafficking protein YggX VM_13120 IPR023664 Murein transglycosylase-C VM_13120 IPR023346 Lysozyme-like domain superfamily VM_13120 IPR000189 Prokaryotic transglycosylase, active site VM_13120 IPR008258 Transglycosylase SLT domain 1 VM_13120 IPR024570 Murein transglycosylase-C, N-terminal VM_13145 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_13145 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain VM_13145 IPR003660 HAMP domain VM_13145 IPR004090 Chemotaxis methyl-accepting receptor VM_13145 IPR000727 Target SNARE coiled-coil homology domain VM_13175 IPR023749 Co-chaperone DjlA VM_13175 IPR029024 TerB-like VM_13175 IPR036869 Chaperone J-domain superfamily VM_13175 IPR001623 DnaJ domain VM_13175 IPR007791 Co-chaperone DjlA, N-terminal VM_13180 IPR007543 LptD, C-terminal VM_13180 IPR005653 Organic solvent tolerance-like, N-terminal VM_13180 IPR020889 LPS-assembly protein LptD VM_13185 IPR023034 Peptidyl-prolyl isomerase SurA VM_13185 IPR027304 Trigger factor/SurA domain superfamily VM_13185 IPR015391 SurA N-terminal VM_13185 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type VM_13190 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase VM_13190 IPR005255 PdxA family VM_13195 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site VM_13195 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VM_13195 IPR023165 rRNA adenine dimethylase-like VM_13195 IPR011530 Ribosomal RNA adenine dimethylase VM_13195 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm VM_13195 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal VM_13200 IPR036767 ApaG domain superfamily VM_13200 IPR023065 Uncharacterised protein family ApaG VM_13200 IPR007474 ApaG domain VM_13205 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type VM_13205 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) VM_13205 IPR029052 Metallo-dependent phosphatase-like VM_13210 IPR017925 Dihydrofolate reductase conserved site VM_13210 IPR024072 Dihydrofolate reductase-like domain superfamily VM_13210 IPR012259 Dihydrofolate reductase VM_13210 IPR001796 Dihydrofolate reductase domain VM_13215 IPR020914 Uncharacterised protein family UPF0442 VM_13215 IPR024528 Threonine/Serine exporter, ThrE VM_13220 IPR010619 Putative threonine/serine exporter VM_13225 IPR006073 GTP binding domain VM_13225 IPR036726 GTP1/OBG domain superfamily VM_13225 IPR006169 GTP1/OBG domain VM_13225 IPR035101 GTP-binding protein, Obg-type VM_13225 IPR031167 OBG-type guanine nucleotide-binding (G) domain VM_13225 IPR006074 GTP1/OBG, conserved site VM_13225 IPR014100 GTP-binding protein Obg/CgtA VM_13225 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_13230 IPR018261 Ribosomal protein L27, conserved site VM_13230 IPR001684 Ribosomal protein L27 VM_13235 IPR036164 L21-like superfamily VM_13235 IPR028909 Ribosomal protein L21-like VM_13235 IPR018258 Ribosomal protein L21, conserved site VM_13235 IPR001787 Ribosomal protein L21 VM_13240 IPR000092 Polyprenyl synthetase VM_13240 IPR008949 Isoprenoid synthase domain superfamily VM_13240 IPR033749 Polyprenyl synthetase, conserved site VM_13245 IPR002293 Amino acid/polyamine transporter I VM_13245 IPR004754 Amino acid antiporter VM_13250 IPR023958 Malate dehydrogenase, type 1, bacterial VM_13250 IPR001252 Malate dehydrogenase, active site VM_13250 IPR022383 Lactate/malate dehydrogenase, C-terminal VM_13250 IPR001236 Lactate/malate dehydrogenase, N-terminal VM_13250 IPR010097 Malate dehydrogenase, type 1 VM_13250 IPR036291 NAD(P)-binding domain superfamily VM_13250 IPR001557 L-lactate/malate dehydrogenase VM_13250 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal VM_13255 IPR036388 Winged helix-like DNA-binding domain superfamily VM_13255 IPR020900 Arginine repressor, DNA-binding domain VM_13255 IPR036390 Winged helix DNA-binding domain superfamily VM_13255 IPR001669 Arginine repressor VM_13255 IPR036251 Arginine repressor, C-terminal domain superfamily VM_13255 IPR020899 Arginine repressor, C-terminal VM_13260 IPR011852 TRAP transporter solute receptor, TAXI family VM_13270 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_13270 IPR006016 UspA VM_13270 IPR006015 Universal stress protein A family VM_13290 IPR025705 Beta-hexosaminidase VM_13290 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal VM_13290 IPR029018 Beta-hexosaminidase-like, domain 2 VM_13290 IPR017853 Glycoside hydrolase superfamily VM_13290 IPR015883 Glycoside hydrolase family 20, catalytic domain VM_13295 IPR011849 Sodium/pantothenate symporter VM_13295 IPR018212 Sodium/solute symporter, conserved site VM_13295 IPR038377 Sodium/glucose symporter superfamily VM_13295 IPR001734 Sodium/solute symporter VM_13305 IPR032466 Metal-dependent hydrolase VM_13305 IPR013108 Amidohydrolase 3 VM_13305 IPR023100 D-aminoacylase, insert domain superfamily VM_13305 IPR011059 Metal-dependent hydrolase, composite domain superfamily VM_13315 IPR001347 Sugar isomerase (SIS) VM_13315 IPR035472 RpiR-like, SIS domain VM_13315 IPR000281 Helix-turn-helix protein RpiR VM_13315 IPR036388 Winged helix-like DNA-binding domain superfamily VM_13315 IPR003836 Glucokinase VM_13315 IPR009057 Homeobox-like domain superfamily VM_13330 IPR012893 HipA-like, C-terminal VM_13330 IPR017508 HipA, N-terminal subdomain 1 VM_13360 IPR009057 Homeobox-like domain superfamily VM_13360 IPR038965 Transposase InsF-like VM_13390 IPR038965 Transposase InsF-like VM_13390 IPR009057 Homeobox-like domain superfamily VM_13400 IPR016716 Regulator of ribonuclease activity B VM_13400 IPR036701 RraB-like superfamily VM_13400 IPR009671 Regulator of ribonuclease activity B domain VM_13405 IPR003876 Arginine deiminase VM_13410 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain VM_13410 IPR036010 2Fe-2S ferredoxin-like superfamily VM_13410 IPR012675 Beta-grasp domain superfamily VM_13410 IPR017927 FAD-binding domain, ferredoxin reductase-type VM_13410 IPR017938 Riboflavin synthase-like beta-barrel VM_13410 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VM_13410 IPR001433 Oxidoreductase FAD/NAD(P)-binding VM_13410 IPR000951 Phthalate dioxygenase reductase VM_13410 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain VM_13415 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase VM_13415 IPR010048 Hydroxylamine reductase VM_13415 IPR016099 Prismane-like, alpha/beta-sandwich VM_13415 IPR011254 Prismane-like superfamily VM_13415 IPR016100 Prismane, alpha-bundle VM_13420 IPR025502 TldD VM_13420 IPR002510 Metalloprotease TldD/PmbA VM_13420 IPR035068 Metalloprotease TldD/PmbA, N-terminal VM_13420 IPR036059 Metalloprotease TldD/PmbA superfamily VM_13425 IPR036526 Carbon-nitrogen hydrolase superfamily VM_13425 IPR001110 Uncharacterised protein family UPF0012, conserved site VM_13425 IPR003010 Carbon-nitrogen hydrolase VM_13430 IPR025263 Domain of unknown function DUF3971 VM_13430 IPR011836 Conserved hypothetical protein CHP02099 VM_13430 IPR032712 AsmA-like, C-terminal VM_13435 IPR022967 RNA-binding domain, S1 VM_13435 IPR012340 Nucleic acid-binding, OB-fold VM_13435 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G VM_13435 IPR004659 Ribonuclease E/G VM_13435 IPR003029 S1 domain VM_13440 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein VM_13440 IPR029001 Inosine triphosphate pyrophosphatase-like VM_13445 IPR007227 Cell shape-determining protein MreD VM_13445 IPR026034 Cell shape-determining protein MreD, proteobacterial type VM_13450 IPR007221 Rod shape-determining protein MreC VM_13450 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 VM_13450 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 VM_13455 IPR004753 Cell shape determining protein MreB VM_13490 IPR012902 Prokaryotic N-terminal methylation site VM_13490 IPR001082 Fimbrial protein pilin VM_13500 IPR018076 Type II secretion system F domain VM_13500 IPR001992 Type II secretion system conserved site VM_13500 IPR003004 GspF/PilC family VM_13500 IPR042094 Type II secretion system F domain superfamily VM_13505 IPR042181 Type II secretion system, protein E, N-terminal VM_13505 IPR013369 Type II secretion system GspE VM_13505 IPR037257 General secretory system II, protein E, N-terminal superfamily VM_13505 IPR003593 AAA+ ATPase domain VM_13505 IPR001482 Type II/IV secretion system protein VM_13505 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_13515 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_13515 IPR036365 PGBD-like superfamily VM_13515 IPR003593 AAA+ ATPase domain VM_13515 IPR036366 PGBD superfamily VM_13515 IPR002477 Peptidoglycan binding-like VM_13520 IPR005644 NolW-like VM_13520 IPR038591 NolW-like superfamily VM_13520 IPR013355 Type IV pilus secretin PilQ VM_13520 IPR021731 AMIN domain VM_13520 IPR001775 GspD/PilQ family VM_13520 IPR011662 Secretin/TonB, short N-terminal domain VM_13520 IPR004846 Type II/III secretion system VM_13520 IPR004845 Type II secretion system GspD, conserved site VM_13540 IPR029787 Nucleotide cyclase VM_13540 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 VM_13540 IPR035919 EAL domain superfamily VM_13540 IPR001633 EAL domain VM_13540 IPR000160 GGDEF domain VM_13545 IPR000424 Primosome PriB/single-strand DNA-binding VM_13545 IPR011344 Single-stranded DNA-binding protein VM_13545 IPR012340 Nucleic acid-binding, OB-fold VM_13550 IPR016032 Signal transduction response regulator, C-terminal effector VM_13550 IPR000792 Transcription regulator LuxR, C-terminal VM_13550 IPR036388 Winged helix-like DNA-binding domain superfamily VM_13555 IPR029044 Nucleotide-diphospho-sugar transferases VM_13555 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type VM_13555 IPR005835 Nucleotidyl transferase domain VM_13560 IPR017871 ABC transporter, conserved site VM_13560 IPR003439 ABC transporter-like VM_13560 IPR041102 UvrA, interaction domain VM_13560 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_13560 IPR041552 UvrA DNA-binding domain VM_13560 IPR004602 UvrABC system subunit A VM_13570 IPR000192 Aminotransferase class V domain VM_13570 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VM_13570 IPR015424 Pyridoxal phosphate-dependent transferase VM_13570 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VM_13570 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VM_13570 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase VM_13575 IPR002912 ACT domain VM_13575 IPR041745 Lysine-sensitive aspartokinase 3, N-terminal catalytic domain VM_13575 IPR001048 Aspartate/glutamate/uridylate kinase VM_13575 IPR005260 Aspartate kinase, monofunctional class VM_13575 IPR001341 Aspartate kinase VM_13575 IPR018042 Aspartate kinase, conserved site VM_13575 IPR036393 Acetylglutamate kinase-like superfamily VM_13580 IPR003726 Homocysteine-binding domain VM_13580 IPR004223 Vitamin B12-dependent methionine synthase, activation domain VM_13580 IPR000489 Pterin-binding domain VM_13580 IPR036594 Methionine synthase domain VM_13580 IPR033706 Methionine synthase, B12-binding domain VM_13580 IPR036589 Homocysteine-binding domain superfamily VM_13580 IPR011822 Cobalamin-dependent methionine synthase VM_13580 IPR011005 Dihydropteroate synthase-like VM_13580 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily VM_13580 IPR006158 Cobalamin (vitamin B12)-binding domain VM_13580 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain VM_13580 IPR036724 Cobalamin-binding domain superfamily VM_13585 IPR006153 Cation/H+ exchanger VM_13585 IPR018422 Cation/H+ exchanger, CPA1 family VM_13585 IPR038770 Sodium/solute symporter superfamily VM_13655 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_13655 IPR011800 Phosphoadenosine phosphosulphate reductase CysH VM_13655 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase VM_13655 IPR002500 Phosphoadenosine phosphosulphate reductase VM_13660 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site VM_13660 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit VM_13660 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain VM_13660 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily VM_13660 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain VM_13665 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VM_13665 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria VM_13665 IPR001433 Oxidoreductase FAD/NAD(P)-binding VM_13665 IPR017938 Riboflavin synthase-like beta-barrel VM_13665 IPR029039 Flavoprotein-like superfamily VM_13665 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase VM_13665 IPR008254 Flavodoxin/nitric oxide synthase VM_13665 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding VM_13665 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain VM_13665 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily VM_13665 IPR001094 Flavodoxin-like VM_13665 IPR017927 FAD-binding domain, ferredoxin reductase-type VM_13685 IPR014318 Phage shock protein, PspG VM_13690 IPR013785 Aldolase-type TIM barrel VM_13690 IPR004653 tRNA-dihydrouridine(20/20a) synthase VM_13690 IPR001269 tRNA-dihydrouridine synthase VM_13690 IPR035587 DUS-like, FMN-binding domain VM_13690 IPR018517 tRNA-dihydrouridine synthase, conserved site VM_13695 IPR036388 Winged helix-like DNA-binding domain superfamily VM_13695 IPR002481 Ferric-uptake regulator VM_13695 IPR036390 Winged helix DNA-binding domain superfamily VM_13705 IPR035482 Phosphoglucose isomerase, SIS domain 2 VM_13705 IPR001672 Phosphoglucose isomerase (PGI) VM_13705 IPR035476 Phosphoglucose isomerase, SIS domain 1 VM_13705 IPR023096 Phosphoglucose isomerase, C-terminal VM_13705 IPR018189 Phosphoglucose isomerase, conserved site VM_13710 IPR035917 YjbQ-like superfamily VM_13710 IPR001602 Uncharacterised protein family UPF0047 VM_13715 IPR029066 PLP-binding barrel VM_13715 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site VM_13715 IPR001608 Alanine racemase, N-terminal VM_13715 IPR000821 Alanine racemase VM_13715 IPR011079 Alanine racemase, C-terminal VM_13715 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal VM_13720 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_13720 IPR003593 AAA+ ATPase domain VM_13720 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily VM_13720 IPR007694 DNA helicase, DnaB-like, C-terminal VM_13720 IPR007692 DNA helicase, DnaB type VM_13720 IPR007693 DNA helicase, DnaB-like, N-terminal VM_13720 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal VM_13730 IPR020594 Ribosomal protein L9, bacteria/chloroplast VM_13730 IPR020069 Ribosomal protein L9, C-terminal VM_13730 IPR036935 Ribosomal protein L9, N-terminal domain superfamily VM_13730 IPR000244 Ribosomal protein L9 VM_13730 IPR020070 Ribosomal protein L9, N-terminal VM_13730 IPR009027 Ribosomal protein L9/RNase H1, N-terminal VM_13730 IPR036791 Ribosomal protein L9, C-terminal domain superfamily VM_13735 IPR036870 Ribosomal protein S18 superfamily VM_13735 IPR018275 Ribosomal protein S18, conserved site VM_13735 IPR001648 Ribosomal protein S18 VM_13740 IPR023646 Primosomal replication protein PriB VM_13740 IPR000424 Primosome PriB/single-strand DNA-binding VM_13740 IPR012340 Nucleic acid-binding, OB-fold VM_13745 IPR020814 Ribosomal protein S6, plastid/chloroplast VM_13745 IPR020815 Ribosomal protein S6, conserved site VM_13745 IPR000529 Ribosomal protein S6 VM_13745 IPR035980 Ribosomal protein S6 superfamily VM_13745 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 VM_13750 IPR008331 Ferritin/DPS protein domain VM_13750 IPR009078 Ferritin-like superfamily VM_13750 IPR002024 Bacterioferritin VM_13750 IPR012347 Ferritin-like VM_13750 IPR009040 Ferritin-like diiron domain VM_13755 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily VM_13755 IPR007419 BFD-like [2Fe-2S]-binding domain VM_13760 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain VM_13760 IPR004161 Translation elongation factor EFTu-like, domain 2 VM_13760 IPR033720 Elongation factor Tu, domain 2 VM_13760 IPR031157 Tr-type G domain, conserved site VM_13760 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_13760 IPR000795 Transcription factor, GTP-binding domain VM_13760 IPR009000 Translation protein, beta-barrel domain superfamily VM_13760 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VM_13760 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle VM_13760 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal VM_13760 IPR005225 Small GTP-binding protein domain VM_13765 IPR009000 Translation protein, beta-barrel domain superfamily VM_13765 IPR031157 Tr-type G domain, conserved site VM_13765 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_13765 IPR020568 Ribosomal protein S5 domain 2-type fold VM_13765 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VM_13765 IPR004540 Translation elongation factor EFG/EF2 VM_13765 IPR035649 EFG, domain V VM_13765 IPR004161 Translation elongation factor EFTu-like, domain 2 VM_13765 IPR000640 Elongation factor EFG, domain V-like VM_13765 IPR005517 Translation elongation factor EFG/EF2, domain IV VM_13765 IPR009022 Elongation factor G, domain III VM_13765 IPR000795 Transcription factor, GTP-binding domain VM_13765 IPR041095 Elongation Factor G, domain II VM_13765 IPR005225 Small GTP-binding protein domain VM_13765 IPR035647 EF-G domain III/V-like VM_13770 IPR023798 Ribosomal protein S7 domain VM_13770 IPR020606 Ribosomal protein S7, conserved site VM_13770 IPR000235 Ribosomal protein S5/S7 VM_13770 IPR036823 Ribosomal protein S7 domain superfamily VM_13770 IPR005717 Ribosomal protein S7, bacterial/organellar-type VM_13775 IPR005679 Ribosomal protein S12, bacterial-type VM_13775 IPR006032 Ribosomal protein S12/S23 VM_13775 IPR012340 Nucleic acid-binding, OB-fold VM_13785 IPR003787 Sulphur relay, DsrE/F-like protein VM_13785 IPR017462 Sulphur relay, TusC/DsrF VM_13785 IPR027396 DsrEFH-like VM_13790 IPR017463 Sulphur relay, TusD/DsrE VM_13790 IPR003787 Sulphur relay, DsrE/F-like protein VM_13790 IPR027396 DsrEFH-like VM_13795 IPR039446 Transcriptional regulator DauR-like VM_13795 IPR039445 Transcriptional regulator DauR-like, HTH domain VM_13795 IPR013559 YheO-like VM_13800 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal VM_13800 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily VM_13800 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VM_13810 IPR007236 SlyX VM_13815 IPR019201 Protein of unknown function DUF2065 VM_13820 IPR001107 Band 7 domain VM_13820 IPR036013 Band 7/SPFH domain superfamily VM_13820 IPR010200 HflC VM_13825 IPR020980 Menbrane protein HflK, N-terminal VM_13825 IPR010201 HflK VM_13825 IPR001107 Band 7 domain VM_13825 IPR036013 Band 7/SPFH domain superfamily VM_13825 IPR001972 Stomatin family VM_13830 IPR016496 GTPase HflX VM_13830 IPR032305 GTP-binding protein, middle domain VM_13830 IPR030394 HflX-type guanine nucleotide-binding (G) domain VM_13830 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_13830 IPR042108 GTPase HflX, N-terminal domain superfamily VM_13830 IPR035647 EF-G domain III/V-like VM_13830 IPR025121 GTPase HflX, N-terminal VM_13830 IPR006073 GTP binding domain VM_13835 IPR010920 LSM domain superfamily VM_13835 IPR005001 RNA-binding protein Hfq VM_13840 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_13840 IPR039657 Dimethylallyltransferase VM_13840 IPR018022 IPP transferase VM_13845 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VM_13845 IPR042120 MutL, C-terminal domain, dimerisation subdomain VM_13845 IPR014762 DNA mismatch repair, conserved site VM_13845 IPR014790 MutL, C-terminal, dimerisation VM_13845 IPR042121 MutL, C-terminal domain, regulatory subdomain VM_13845 IPR013507 DNA mismatch repair protein, S5 domain 2-like VM_13845 IPR002099 DNA mismatch repair protein family, N-terminal VM_13845 IPR020667 DNA mismatch repair protein, MutL VM_13845 IPR037198 MutL, C-terminal domain superfamily VM_13845 IPR020568 Ribosomal protein S5 domain 2-type fold VM_13845 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VM_13845 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms VM_13850 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain VM_13855 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE VM_13855 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_13860 IPR013542 Domain of unknown function DUF1730 VM_13860 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VM_13860 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VM_13860 IPR004453 Epoxyqueuosine reductase QueG VM_13910 IPR022894 Oligoribonuclease VM_13910 IPR012337 Ribonuclease H-like superfamily VM_13910 IPR036397 Ribonuclease H superfamily VM_13910 IPR013520 Exonuclease, RNase T/DNA polymerase III VM_13915 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_13915 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain VM_13915 IPR010914 RsgA GTPase domain VM_13915 IPR004881 Ribosome biogenesis GTPase RsgA VM_13920 IPR003817 Phosphatidylserine decarboxylase-related VM_13920 IPR033177 Phosphatidylserine decarboxylase VM_13920 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 VM_13925 IPR001898 Solute carrier family 13 VM_13925 IPR031312 Sodium/sulphate symporter, conserved site VM_13935 IPR011258 BPG-independent PGAM, N-terminal VM_13935 IPR006124 Metalloenzyme VM_13935 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily VM_13935 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent VM_13935 IPR017850 Alkaline-phosphatase-like, core domain superfamily VM_13940 IPR011055 Duplicated hybrid motif VM_13940 IPR016047 Peptidase M23 VM_13950 IPR013571 Transcription regulator QacR, C-terminal VM_13950 IPR001647 DNA-binding HTH domain, TetR-type VM_13950 IPR009057 Homeobox-like domain superfamily VM_13950 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VM_13950 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VM_13955 IPR000257 Uroporphyrinogen decarboxylase (URO-D) VM_13955 IPR006361 Uroporphyrinogen decarboxylase HemE VM_13955 IPR038071 UROD/MetE-like superfamily VM_13960 IPR020084 NUDIX hydrolase, conserved site VM_13960 IPR015797 NUDIX hydrolase-like domain superfamily VM_13960 IPR022925 NADH pyrophosphatase NudC VM_13960 IPR015376 Zinc ribbon, NADH pyrophosphatase VM_13960 IPR000086 NUDIX hydrolase domain VM_13965 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ VM_13965 IPR023785 Regulator of RNA polymerase sigma(70) subunit, Rsd VM_13965 IPR038309 Rsd/AlgQ superfamily VM_13970 IPR007081 RNA polymerase Rpb1, domain 5 VM_13970 IPR007083 RNA polymerase Rpb1, domain 4 VM_13970 IPR042102 RNA polymerase Rpb1, domain 3 superfamily VM_13970 IPR012754 DNA-directed RNA polymerase, subunit beta-prime VM_13970 IPR007066 RNA polymerase Rpb1, domain 3 VM_13970 IPR038120 RNA polymerase Rpb1, funnel domain superfamily VM_13970 IPR006592 RNA polymerase, N-terminal VM_13970 IPR000722 RNA polymerase, alpha subunit VM_13970 IPR007080 RNA polymerase Rpb1, domain 1 VM_13975 IPR007644 RNA polymerase, beta subunit, protrusion VM_13975 IPR007642 RNA polymerase Rpb2, domain 2 VM_13975 IPR037034 RNA polymerase Rpb2, domain 2 superfamily VM_13975 IPR007645 RNA polymerase Rpb2, domain 3 VM_13975 IPR007641 RNA polymerase Rpb2, domain 7 VM_13975 IPR014724 RNA polymerase Rpb2, OB-fold VM_13975 IPR007121 RNA polymerase, beta subunit, conserved site VM_13975 IPR042107 DNA-directed RNA polymerase, beta subunit, external 1 domain superfamily VM_13975 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain VM_13975 IPR015712 DNA-directed RNA polymerase, subunit 2 VM_13975 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain VM_13975 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type VM_13975 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily VM_13980 IPR013823 Ribosomal protein L7/L12, C-terminal VM_13980 IPR008932 Ribosomal protein L7/L12, oligomerisation VM_13980 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VM_13980 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily VM_13980 IPR000206 Ribosomal protein L7/L12 VM_13985 IPR022973 Ribosomal protein L10 VM_13985 IPR001790 Ribosomal protein L10P VM_13985 IPR002363 Ribosomal protein L10, eubacterial, conserved site VM_13990 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein VM_13990 IPR023674 Ribosomal protein L1-like VM_13990 IPR002143 Ribosomal protein L1 VM_13990 IPR023673 Ribosomal protein L1, conserved site VM_13990 IPR005878 Ribosomal protein L1, bacterial-type VM_13990 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich VM_13995 IPR000911 Ribosomal protein L11/L12 VM_13995 IPR006519 Ribosomal protein L11, bacterial-type VM_13995 IPR020785 Ribosomal protein L11, conserved site VM_13995 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily VM_13995 IPR020783 Ribosomal protein L11, C-terminal VM_13995 IPR036769 Ribosomal protein L11, C-terminal domain superfamily VM_13995 IPR020784 Ribosomal protein L11, N-terminal VM_14000 IPR008991 Translation protein SH3-like domain superfamily VM_14000 IPR006645 NusG, N-terminal VM_14000 IPR036735 NusG, N-terminal domain superfamily VM_14000 IPR014722 Ribosomal protein L2, domain 2 VM_14000 IPR001062 Transcription antitermination protein, NusG VM_14000 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site VM_14000 IPR005824 KOW VM_14005 IPR038379 SecE superfamily VM_14005 IPR005807 SecE subunit of protein translocation complex, bacterial-like VM_14005 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit VM_14010 IPR009000 Translation protein, beta-barrel domain superfamily VM_14010 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal VM_14010 IPR033720 Elongation factor Tu, domain 2 VM_14010 IPR005225 Small GTP-binding protein domain VM_14010 IPR000795 Transcription factor, GTP-binding domain VM_14010 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle VM_14010 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_14010 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain VM_14010 IPR031157 Tr-type G domain, conserved site VM_14010 IPR004161 Translation elongation factor EFTu-like, domain 2 VM_14010 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VM_14035 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_14035 IPR004566 Pantothenate kinase VM_14035 IPR006083 Phosphoribulokinase/uridine kinase VM_14040 IPR036390 Winged helix DNA-binding domain superfamily VM_14040 IPR036388 Winged helix-like DNA-binding domain superfamily VM_14040 IPR004408 Biotin--acetyl-CoA-carboxylase ligase VM_14040 IPR004409 Biotin operon repressor, helix-turn-helix domain VM_14040 IPR003142 Biotin protein ligase, C-terminal VM_14040 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain VM_14040 IPR013196 Helix-turn-helix, type 11 VM_14040 IPR030855 Bifunctional ligase/repressor BirA VM_14040 IPR008988 Transcriptional repressor, C-terminal VM_14045 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase VM_14045 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal VM_14045 IPR016166 FAD-binding domain, PCMH-type VM_14045 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily VM_14045 IPR036318 FAD-binding, type PCMH-like superfamily VM_14045 IPR016167 FAD-binding, type PCMH, subdomain 1 VM_14045 IPR006094 FAD linked oxidase, N-terminal VM_14045 IPR016169 FAD-binding, type PCMH, subdomain 2 VM_14060 IPR001736 Phospholipase D/Transphosphatidylase VM_14060 IPR016270 CDP-alcohol phosphatidyltransferase class-II family VM_14060 IPR025202 Phospholipase D-like domain VM_14090 IPR017938 Riboflavin synthase-like beta-barrel VM_14090 IPR001433 Oxidoreductase FAD/NAD(P)-binding VM_14090 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VM_14090 IPR017927 FAD-binding domain, ferredoxin reductase-type VM_14095 IPR017938 Riboflavin synthase-like beta-barrel VM_14095 IPR001433 Oxidoreductase FAD/NAD(P)-binding VM_14095 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VM_14095 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase VM_14095 IPR017927 FAD-binding domain, ferredoxin reductase-type VM_14095 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain VM_14095 IPR012675 Beta-grasp domain superfamily VM_14095 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site VM_14095 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain VM_14095 IPR036010 2Fe-2S ferredoxin-like superfamily VM_14100 IPR002830 UbiD decarboxylyase family VM_14110 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_14110 IPR012340 Nucleic acid-binding, OB-fold VM_14110 IPR011129 Cold shock domain VM_14110 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain VM_14110 IPR003593 AAA+ ATPase domain VM_14110 IPR041703 Transcription termination factor Rho, ATP binding domain VM_14110 IPR036269 Rho termination factor, N-terminal domain superfamily VM_14110 IPR011113 Rho termination factor, RNA-binding domain VM_14110 IPR004665 Transcription termination factor Rho VM_14110 IPR011112 Rho termination factor, N-terminal VM_14115 IPR017937 Thioredoxin, conserved site VM_14115 IPR013766 Thioredoxin domain VM_14115 IPR005746 Thioredoxin VM_14115 IPR036249 Thioredoxin-like superfamily VM_14120 IPR023554 ATP-dependent RNA helicase RhlB type VM_14120 IPR014001 Helicase superfamily 1/2, ATP-binding domain VM_14120 IPR014014 RNA helicase, DEAD-box type, Q motif VM_14120 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VM_14120 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_14120 IPR001650 Helicase, C-terminal VM_14120 IPR011545 DEAD/DEAH box helicase domain VM_14125 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase VM_14125 IPR003695 Ppx/GppA phosphatase VM_14125 IPR030673 Pyrophosphatase, GppA/Ppx-type VM_14130 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_14130 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal VM_14130 IPR001789 Signal transduction response regulator, receiver domain VM_14130 IPR038388 RcsC, C-terminal domain superfamily VM_14130 IPR030856 Sensor histidine kinase RcsC VM_14130 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VM_14130 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VM_14130 IPR005467 Histidine kinase domain VM_14130 IPR011006 CheY-like superfamily VM_14130 IPR003594 Histidine kinase/HSP90-like ATPase VM_14130 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VM_14135 IPR026032 Probable 3-phenylpropionic acid transporter VM_14135 IPR036259 MFS transporter superfamily VM_14135 IPR024989 Major facilitator superfamily associated domain VM_14155 IPR025110 AMP-binding enzyme, C-terminal domain VM_14155 IPR020845 AMP-binding, conserved site VM_14155 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain VM_14155 IPR011904 Acetate-CoA ligase VM_14155 IPR042099 AMP-dependent synthetase-like superfamily VM_14155 IPR000873 AMP-dependent synthetase/ligase VM_14160 IPR036441 Dehydroquinase, class II superfamily VM_14160 IPR018509 Dehydroquinase, class II, conserved site VM_14160 IPR001874 Dehydroquinase, class II VM_14165 IPR000089 Biotin/lipoyl attachment VM_14165 IPR001249 Acetyl-CoA biotin carboxyl carrier VM_14165 IPR001882 Biotin-binding site VM_14165 IPR011053 Single hybrid motif VM_14170 IPR011054 Rudiment single hybrid motif VM_14170 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase VM_14170 IPR011761 ATP-grasp fold VM_14170 IPR016185 Pre-ATP-grasp domain superfamily VM_14170 IPR013815 ATP-grasp fold, subdomain 1 VM_14170 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain VM_14170 IPR005481 Biotin carboxylase-like, N-terminal domain VM_14170 IPR005482 Biotin carboxylase, C-terminal VM_14170 IPR011764 Biotin carboxylation domain VM_14175 IPR004498 Ribosomal protein L11 methyltransferase VM_14175 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VM_14180 IPR001269 tRNA-dihydrouridine synthase VM_14180 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 VM_14180 IPR018517 tRNA-dihydrouridine synthase, conserved site VM_14180 IPR013785 Aldolase-type TIM barrel VM_14180 IPR035587 DUS-like, FMN-binding domain VM_14180 IPR032887 tRNA-dihydrouridine synthase B VM_14180 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal VM_14185 IPR009057 Homeobox-like domain superfamily VM_14185 IPR005412 DNA-binding protein Fis VM_14185 IPR002197 DNA binding HTH domain, Fis-type VM_14190 IPR000843 LacI-type HTH domain VM_14190 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VM_14190 IPR001761 Periplasmic binding protein/LacI sugar binding domain VM_14190 IPR028082 Periplasmic binding protein-like I VM_14195 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site VM_14195 IPR037237 IlvD/EDD, N-terminal domain VM_14195 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase VM_14195 IPR042096 Dihydroxy-acid dehydratase, C-terminal VM_14195 IPR004786 6-phosphogluconate dehydratase VM_14200 IPR006001 Carbohydrate kinase, thermoresistant glucokinase VM_14200 IPR031322 Shikimate kinase/gluconokinase VM_14200 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_14205 IPR003474 Gluconate transporter VM_14210 IPR031338 KDPG/KHG aldolase, active site 2 VM_14210 IPR031337 KDPG/KHG aldolase, active site 1 VM_14210 IPR013785 Aldolase-type TIM barrel VM_14210 IPR000887 KDPG/KHG aldolase VM_14215 IPR010105 TonB-dependent siderophore receptor VM_14215 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VM_14215 IPR000531 TonB-dependent receptor-like, beta-barrel VM_14215 IPR039423 TonB-dependent receptor-like VM_14215 IPR037066 TonB-dependent receptor, plug domain superfamily VM_14215 IPR012910 TonB-dependent receptor, plug domain VM_14225 IPR004090 Chemotaxis methyl-accepting receptor VM_14225 IPR003660 HAMP domain VM_14225 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_14225 IPR033480 Single Cache domain 2 VM_14230 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VM_14230 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal VM_14230 IPR015424 Pyridoxal phosphate-dependent transferase VM_14230 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VM_14230 IPR000310 Orn/Lys/Arg decarboxylase, major domain VM_14230 IPR011193 Ornithine/lysine/arginine decarboxylase VM_14230 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily VM_14230 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal VM_14235 IPR002293 Amino acid/polyamine transporter I VM_14235 IPR004754 Amino acid antiporter VM_14240 IPR040970 CadC C-terminal domain 1 VM_14240 IPR001867 OmpR/PhoB-type DNA-binding domain VM_14240 IPR016032 Signal transduction response regulator, C-terminal effector VM_14240 IPR011990 Tetratricopeptide-like helical domain superfamily VM_14240 IPR039420 Transcriptional regulatory protein WalR-like VM_14240 IPR036388 Winged helix-like DNA-binding domain superfamily VM_14245 IPR000551 MerR-type HTH domain VM_14245 IPR009061 Putative DNA-binding domain superfamily VM_14245 IPR011788 Zn(II)-responsive transcriptional regulator VM_14250 IPR016193 Cytidine deaminase-like VM_14250 IPR011607 Methylglyoxal synthase-like domain VM_14250 IPR002695 Bifunctional purine biosynthesis protein PurH-like VM_14250 IPR036914 Methylglyoxal synthase-like domain superfamily VM_14250 IPR024051 AICAR transformylase, duplicated domain superfamily VM_14255 IPR020560 Phosphoribosylglycinamide synthetase, C-domain VM_14255 IPR020559 Phosphoribosylglycinamide synthetase, conserved site VM_14255 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily VM_14255 IPR011054 Rudiment single hybrid motif VM_14255 IPR000115 Phosphoribosylglycinamide synthetase VM_14255 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal VM_14255 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain VM_14255 IPR016185 Pre-ATP-grasp domain superfamily VM_14255 IPR013815 ATP-grasp fold, subdomain 1 VM_14255 IPR011761 ATP-grasp fold VM_14265 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily VM_14265 IPR000119 Histone-like DNA-binding protein VM_14265 IPR020816 Histone-like DNA-binding protein, conserved site VM_14270 IPR002550 CNNM, transmembrane domain VM_14270 IPR000644 CBS domain VM_14275 IPR023381 YP001051499.1-like domain superfamily VM_14275 IPR007338 Protein of unknown function DUF416 VM_14280 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VM_14280 IPR023514 Glyoxylate/hydroxypyruvate reductase A VM_14280 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain VM_14280 IPR036291 NAD(P)-binding domain superfamily VM_14285 IPR005122 Uracil-DNA glycosylase-like VM_14285 IPR036895 Uracil-DNA glycosylase-like domain superfamily VM_14290 IPR030192 Miniconductance mechanosensitive channel YbdG VM_14290 IPR011066 Mechanosensitive ion channel MscS, C-terminal VM_14290 IPR010920 LSM domain superfamily VM_14290 IPR006685 Mechanosensitive ion channel MscS VM_14295 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VM_14295 IPR001279 Metallo-beta-lactamase VM_14295 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain VM_14295 IPR022712 Beta-Casp domain VM_14300 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain VM_14300 IPR036291 NAD(P)-binding domain superfamily VM_14300 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VM_14305 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VM_14305 IPR015424 Pyridoxal phosphate-dependent transferase VM_14305 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VM_14305 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase VM_14315 IPR003362 Bacterial sugar transferase VM_14325 IPR000836 Phosphoribosyltransferase domain VM_14325 IPR017932 Glutamine amidotransferase type 2 domain VM_14325 IPR029055 Nucleophile aminohydrolases, N-terminal VM_14325 IPR029057 Phosphoribosyltransferase-like VM_14325 IPR035584 Amidophosphoribosyltransferase, N-terminal VM_14325 IPR005854 Amidophosphoribosyltransferase VM_14350 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase VM_14350 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VM_14350 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VM_14350 IPR015424 Pyridoxal phosphate-dependent transferase VM_14355 IPR011004 Trimeric LpxA-like superfamily VM_14355 IPR001451 Hexapeptide repeat VM_14360 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase VM_14360 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal VM_14360 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation VM_14360 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal VM_14360 IPR036291 NAD(P)-binding domain superfamily VM_14360 IPR017476 UDP-glucose/GDP-mannose dehydrogenase VM_14360 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily VM_14360 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily VM_14365 IPR000683 Oxidoreductase, N-terminal VM_14365 IPR036291 NAD(P)-binding domain superfamily VM_14375 IPR036291 NAD(P)-binding domain superfamily VM_14375 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase VM_14375 IPR001509 NAD-dependent epimerase/dehydratase VM_14380 IPR001137 Glycoside hydrolase family 11 VM_14380 IPR013319 Glycoside hydrolase family 11/12 VM_14380 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel VM_14380 IPR018208 Glycoside hydrolase family 11, active site 1 VM_14380 IPR033119 Glycoside hydrolase family 11, active site 2 VM_14380 IPR002509 NodB homology domain VM_14380 IPR006311 Twin-arginine translocation pathway, signal sequence VM_14380 IPR001919 Carbohydrate-binding type-2 domain VM_14380 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily VM_14380 IPR012291 CBM2, carbohydrate-binding domain superfamily VM_14380 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily VM_14380 IPR033123 Glycosyl hydrolases family 11 (GH11) domain VM_14395 IPR011910 ADP-heptose--LPS heptosyltransferase 2 VM_14395 IPR002201 Glycosyl transferase, family 9 VM_14405 IPR029044 Nucleotide-diphospho-sugar transferases VM_14405 IPR007577 Glycosyltransferase, DXD sugar-binding motif VM_14410 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal VM_14410 IPR039901 3-deoxy-D-manno-octulosonic acid transferase VM_14410 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily VM_14435 IPR011009 Protein kinase-like domain superfamily VM_14435 IPR022826 3-deoxy-D-manno-octulosonic acid kinase VM_14435 IPR000719 Protein kinase domain VM_14440 IPR002201 Glycosyl transferase, family 9 VM_14445 IPR029044 Nucleotide-diphospho-sugar transferases VM_14445 IPR001173 Glycosyltransferase 2-like VM_14450 IPR002201 Glycosyl transferase, family 9 VM_14455 IPR004821 Cytidyltransferase-like domain VM_14455 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_14455 IPR001980 Phosphopantetheine adenylyltransferase VM_14460 IPR010663 Zinc finger, FPG/IleRS-type VM_14460 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain VM_14460 IPR020629 Formamidopyrimidine-DNA glycosylase VM_14460 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site VM_14460 IPR035937 MutM-like, N-terminal VM_14460 IPR010979 Ribosomal protein S13-like, H2TH VM_14460 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding VM_14460 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type VM_14470 IPR011332 Zinc-binding ribosomal protein VM_14470 IPR001705 Ribosomal protein L33 VM_14470 IPR018264 Ribosomal protein L33, conserved site VM_14470 IPR038584 Ribosomal protein L33 superfamily VM_14475 IPR034704 L28p-like VM_14475 IPR026569 Ribosomal protein L28/L24 VM_14475 IPR001383 Ribosomal protein L28 VM_14475 IPR037147 Ribosomal protein L28/L24 superfamily VM_14480 IPR001405 Uncharacterised protein family UPF0758 VM_14480 IPR020891 Uncharacterised protein family UPF0758, conserved site VM_14480 IPR037518 MPN domain VM_14480 IPR025657 RadC-like JAB domain VM_14480 IPR010994 RuvA domain 2-like VM_14485 IPR004090 Chemotaxis methyl-accepting receptor VM_14485 IPR003660 HAMP domain VM_14485 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_14485 IPR033480 Single Cache domain 2 VM_14485 IPR000727 Target SNARE coiled-coil homology domain VM_14490 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal VM_14490 IPR035929 CoaB-like superfamily VM_14490 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC VM_14490 IPR036551 Flavin prenyltransferase-like VM_14490 IPR003382 Flavoprotein VM_14495 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VM_14495 IPR023769 Nucleoid occlusion factor SlmA VM_14495 IPR009057 Homeobox-like domain superfamily VM_14495 IPR001647 DNA-binding HTH domain, TetR-type VM_14500 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase VM_14500 IPR004960 Bacterial lipid A biosynthesis acyltransferase VM_14505 IPR011921 Lipid A biosynthesis myristoyltransferase VM_14505 IPR004960 Bacterial lipid A biosynthesis acyltransferase VM_14510 IPR004467 Orotate phosphoribosyl transferase domain VM_14510 IPR023031 Orotate phosphoribosyltransferase VM_14510 IPR029057 Phosphoribosyltransferase-like VM_14510 IPR000836 Phosphoribosyltransferase domain VM_14515 IPR018336 Ribonuclease PH, conserved site VM_14515 IPR002381 Ribonuclease PH, bacterial-type VM_14515 IPR020568 Ribosomal protein S5 domain 2-type fold VM_14515 IPR027408 PNPase/RNase PH domain superfamily VM_14515 IPR001247 Exoribonuclease, phosphorolytic domain 1 VM_14515 IPR015847 Exoribonuclease, phosphorolytic domain 2 VM_14515 IPR036345 Exoribonuclease, PH domain 2 superfamily VM_14520 IPR013527 YicC-like, N-terminal VM_14520 IPR005229 Conserved hypothetical protein CHP00255 VM_14520 IPR013551 Domain of unknown function DUF1732 VM_14525 IPR005134 Uncharacterised protein family UPF0114 VM_14525 IPR020761 Uncharacterised protein family UPF0114, bacteria VM_14530 IPR036878 Glucose permease domain IIB VM_14530 IPR013013 Phosphotransferase system, EIIC component, type 1 VM_14530 IPR001996 Phosphotransferase system, IIB component, type 1 VM_14530 IPR003352 Phosphotransferase system, EIIC VM_14530 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site VM_14535 IPR001347 Sugar isomerase (SIS) VM_14535 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ VM_14535 IPR005486 Glucokinase regulatory protein, conserved site VM_14535 IPR040190 N-acetylmuramic acid 6-phosphate etherase/glucokinase regulatory protein VM_14545 IPR009057 Homeobox-like domain superfamily VM_14545 IPR000281 Helix-turn-helix protein RpiR VM_14545 IPR035472 RpiR-like, SIS domain VM_14545 IPR001347 Sugar isomerase (SIS) VM_14545 IPR022821 Transcription regulator HTH, MurR VM_14545 IPR036388 Winged helix-like DNA-binding domain superfamily VM_14550 IPR000522 ABC transporter, permease protein, BtuC-like VM_14550 IPR037294 ABC transporter, BtuC-like VM_14555 IPR002491 ABC transporter periplasmic binding domain VM_14560 IPR003593 AAA+ ATPase domain VM_14560 IPR003439 ABC transporter-like VM_14560 IPR017871 ABC transporter, conserved site VM_14560 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_14565 IPR039423 TonB-dependent receptor-like VM_14565 IPR037066 TonB-dependent receptor, plug domain superfamily VM_14565 IPR012910 TonB-dependent receptor, plug domain VM_14565 IPR000531 TonB-dependent receptor-like, beta-barrel VM_14565 IPR010916 TonB box, conserved site VM_14565 IPR010105 TonB-dependent siderophore receptor VM_14565 IPR010917 TonB-dependent receptor, conserved site VM_14565 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VM_14580 IPR036388 Winged helix-like DNA-binding domain superfamily VM_14580 IPR018982 RQC domain VM_14580 IPR011545 DEAD/DEAH box helicase domain VM_14580 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain VM_14580 IPR014001 Helicase superfamily 1/2, ATP-binding domain VM_14580 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_14580 IPR002121 HRDC domain VM_14580 IPR010997 HRDC-like superfamily VM_14580 IPR001650 Helicase, C-terminal VM_14580 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial VM_14580 IPR004589 DNA helicase, ATP-dependent, RecQ type VM_14585 IPR004626 RarD protein VM_14585 IPR000620 EamA domain VM_14590 IPR029055 Nucleophile aminohydrolases, N-terminal VM_14590 IPR000101 Gamma-glutamyltranspeptidase VM_14600 IPR004778 Homoserine/Threonine efflux protein VM_14600 IPR001123 Amino acid exporter protein, LeuE-type VM_14610 IPR034739 UvrD/AddA helicase, N-terminal VM_14610 IPR014016 UvrD-like helicase, ATP-binding domain VM_14610 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_14610 IPR013986 DExx box DNA helicase domain superfamily VM_14610 IPR000212 DNA helicase, UvrD/REP type VM_14610 IPR014017 UvrD-like DNA helicase, C-terminal VM_14610 IPR005753 DNA helicase, ATP-dependent, UvrD type VM_14615 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 VM_14615 IPR001567 Peptidase M3A/M3B catalytic domain VM_14620 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VM_14620 IPR002052 DNA methylase, N-6 adenine-specific, conserved site VM_14620 IPR007473 Ribosomal RNA large subunit methyltransferase J VM_14625 IPR036188 FAD/NAD(P)-binding domain superfamily VM_14625 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily VM_14625 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site VM_14625 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VM_14625 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I VM_14625 IPR006322 Glutathione reductase, eukaryote/bacterial VM_14625 IPR023753 FAD/NAD(P)-binding domain VM_14635 IPR035906 MetI-like superfamily VM_14635 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VM_14635 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VM_14645 IPR030678 Peptide/nickel binding protein, MppA-type VM_14645 IPR000914 Solute-binding protein family 5 domain VM_14645 IPR039424 Solute-binding protein family 5 VM_14645 IPR023765 Solute-binding protein family 5, conserved site VM_14650 IPR017871 ABC transporter, conserved site VM_14650 IPR003439 ABC transporter-like VM_14650 IPR003593 AAA+ ATPase domain VM_14650 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal VM_14650 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_14685 IPR036909 Cytochrome c-like domain superfamily VM_14685 IPR002323 Cytochrome c, class IE VM_14685 IPR009056 Cytochrome c-like domain VM_14690 IPR034739 UvrD/AddA helicase, N-terminal VM_14690 IPR014016 UvrD-like helicase, ATP-binding domain VM_14690 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_14690 IPR005752 ATP-dependent DNA helicase Rep VM_14690 IPR000212 DNA helicase, UvrD/REP type VM_14690 IPR014017 UvrD-like DNA helicase, C-terminal VM_14690 IPR013986 DExx box DNA helicase domain superfamily VM_14695 IPR001647 DNA-binding HTH domain, TetR-type VM_14695 IPR009057 Homeobox-like domain superfamily VM_14695 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VM_14700 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VM_14700 IPR006143 RND efflux pump, membrane fusion protein VM_14705 IPR001036 Acriflavin resistance protein VM_14705 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VM_14710 IPR007475 Ubiquinone biosynthesis accessory factor UbiK VM_14715 IPR036291 NAD(P)-binding domain superfamily VM_14715 IPR013116 Ketol-acid reductoisomerase, N-terminal VM_14715 IPR000506 Ketol-acid reductoisomerase, C-terminal VM_14715 IPR013023 Ketol-acid reductoisomerase VM_14715 IPR013328 6-phosphogluconate dehydrogenase, domain 2 VM_14715 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily VM_14720 IPR036388 Winged helix-like DNA-binding domain superfamily VM_14720 IPR036390 Winged helix DNA-binding domain superfamily VM_14720 IPR037404 HTH-type transcriptional activator IlvY, PBP2 domain VM_14720 IPR000847 Transcription regulator HTH, LysR VM_14720 IPR005119 LysR, substrate-binding VM_14790 IPR008254 Flavodoxin/nitric oxide synthase VM_14790 IPR001226 Flavodoxin, conserved site VM_14790 IPR026816 Flavodoxin domain VM_14790 IPR029039 Flavoprotein-like superfamily VM_14795 IPR003445 Cation transporter VM_14795 IPR004772 TrkH potassium transport family VM_14800 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site VM_14800 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal VM_14800 IPR020568 Ribosomal protein S5 domain 2-type fold VM_14800 IPR035647 EF-G domain III/V-like VM_14800 IPR023582 Impact family VM_14800 IPR015796 Impact family, bacterial/archaeal VM_14800 IPR001498 Impact, N-terminal VM_14800 IPR036956 Impact, N-terminal domain superfamily VM_14805 IPR029045 ClpP/crotonase-like domain superfamily VM_14805 IPR012799 Fatty oxidation complex, alpha subunit FadB VM_14805 IPR036291 NAD(P)-binding domain superfamily VM_14805 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily VM_14805 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal VM_14805 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding VM_14805 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site VM_14805 IPR001753 Enoyl-CoA hydratase/isomerase VM_14810 IPR020616 Thiolase, N-terminal VM_14810 IPR012805 Acetyl-CoA C-acyltransferase FadA VM_14810 IPR020617 Thiolase, C-terminal VM_14810 IPR020613 Thiolase, conserved site VM_14810 IPR020610 Thiolase, active site VM_14810 IPR016039 Thiolase-like VM_14810 IPR020615 Thiolase, acyl-enzyme intermediate active site VM_14810 IPR002155 Thiolase VM_14815 IPR036390 Winged helix DNA-binding domain superfamily VM_14815 IPR005119 LysR, substrate-binding VM_14815 IPR000847 Transcription regulator HTH, LysR VM_14815 IPR036388 Winged helix-like DNA-binding domain superfamily VM_14820 IPR020846 Major facilitator superfamily domain VM_14820 IPR036259 MFS transporter superfamily VM_14820 IPR011701 Major facilitator superfamily VM_14820 IPR004812 Drug resistance transporter Bcr/CmlA subfamily VM_14825 IPR025877 MobA-like NTP transferase VM_14825 IPR029044 Nucleotide-diphospho-sugar transferases VM_14825 IPR001451 Hexapeptide repeat VM_14825 IPR011004 Trimeric LpxA-like superfamily VM_14825 IPR038009 GlmU, C-terminal LbH domain VM_14825 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase VM_14830 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit VM_14830 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain VM_14830 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal VM_14830 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily VM_14830 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal VM_14835 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site VM_14835 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain VM_14835 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily VM_14835 IPR005722 ATP synthase, F1 complex, beta subunit VM_14835 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain VM_14835 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal VM_14835 IPR003593 AAA+ ATPase domain VM_14835 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_14840 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily VM_14840 IPR000131 ATP synthase, F1 complex, gamma subunit VM_14840 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site VM_14845 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily VM_14845 IPR000793 ATP synthase, alpha subunit, C-terminal VM_14845 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site VM_14845 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_14845 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily VM_14845 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain VM_14845 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily VM_14845 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain VM_14845 IPR005294 ATP synthase, F1 complex, alpha subunit VM_14845 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain VM_14850 IPR000711 ATPase, OSCP/delta subunit VM_14850 IPR020781 ATPase, OSCP/delta subunit, conserved site VM_14850 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily VM_14855 IPR005864 ATP synthase, F0 complex, subunit b, bacterial VM_14855 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily VM_14855 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast VM_14860 IPR035921 F/V-ATP synthase subunit C superfamily VM_14860 IPR000454 ATP synthase, F0 complex, subunit C VM_14860 IPR002379 V-ATPase proteolipid subunit C-like domain VM_14860 IPR038662 F1F0 ATP synthase subunit C superfamily VM_14860 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast VM_14860 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site VM_14865 IPR023011 ATP synthase, F0 complex, subunit A, active site VM_14865 IPR035908 ATP synthase, F0 complex, subunit A superfamily VM_14865 IPR000568 ATP synthase, F0 complex, subunit A VM_14870 IPR005598 ATP synthase protein I VM_14875 IPR036086 ParB/Sulfiredoxin superfamily VM_14875 IPR003115 ParB/Sulfiredoxin VM_14875 IPR004437 ParB/RepB/Spo0J partition protein VM_14875 IPR041468 ParB/Spo0J, HTH domain VM_14880 IPR025669 AAA domain VM_14880 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_14885 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VM_14885 IPR003682 rRNA small subunit methyltransferase G VM_14890 IPR036188 FAD/NAD(P)-binding domain superfamily VM_14890 IPR026904 GidA associated domain 3 VM_14890 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG VM_14890 IPR020595 MnmG-related, conserved site VM_14890 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related VM_14895 IPR008254 Flavodoxin/nitric oxide synthase VM_14895 IPR029039 Flavoprotein-like superfamily VM_14900 IPR000847 Transcription regulator HTH, LysR VM_14900 IPR005119 LysR, substrate-binding VM_14900 IPR036390 Winged helix DNA-binding domain superfamily VM_14900 IPR036388 Winged helix-like DNA-binding domain superfamily VM_14915 IPR016163 Aldehyde dehydrogenase, C-terminal VM_14915 IPR016161 Aldehyde/histidinol dehydrogenase VM_14915 IPR016160 Aldehyde dehydrogenase, cysteine active site VM_14915 IPR029510 Aldehyde dehydrogenase, glutamic acid active site VM_14915 IPR016162 Aldehyde dehydrogenase, N-terminal VM_14915 IPR010102 Succinate semialdehyde dehydrogenase VM_14915 IPR015590 Aldehyde dehydrogenase domain VM_14925 IPR009057 Homeobox-like domain superfamily VM_14925 IPR006118 Recombinase, conserved site VM_14925 IPR006119 Resolvase, N-terminal catalytic domain VM_14925 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily VM_14925 IPR006120 Resolvase, HTH domain VM_14945 IPR011335 Restriction endonuclease type II-like VM_14945 IPR034739 UvrD/AddA helicase, N-terminal VM_14945 IPR014017 UvrD-like DNA helicase, C-terminal VM_14945 IPR000212 DNA helicase, UvrD/REP type VM_14945 IPR014016 UvrD-like helicase, ATP-binding domain VM_14945 IPR004586 RecBCD enzyme subunit RecB VM_14945 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_14945 IPR011604 Exonuclease, phage-type/RecB, C-terminal VM_14995 IPR010927 Type IV conjugative transfer system protein TraH VM_15040 IPR002104 Integrase, catalytic domain VM_15040 IPR013762 Integrase-like, catalytic domain superfamily VM_15040 IPR010998 Integrase/recombinase, N-terminal VM_15040 IPR011010 DNA breaking-rejoining enzyme, catalytic core VM_15040 IPR004107 Integrase, SAM-like, N-terminal VM_15045 IPR031168 TrmE-type guanine nucleotide-binding domain VM_15045 IPR018948 GTP-binding protein TrmE, N-terminal VM_15045 IPR005225 Small GTP-binding protein domain VM_15045 IPR006073 GTP binding domain VM_15045 IPR004520 tRNA modification GTPase MnmE VM_15045 IPR027368 tRNA modification GTPase MnmE domain 2 VM_15045 IPR025867 MnmE, helical domain VM_15045 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 VM_15045 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_15050 IPR038221 YidC, periplasmic domain superfamily VM_15050 IPR019998 Membrane insertase YidC VM_15050 IPR028055 Membrane insertase YidC/Oxa1, C-terminal VM_15050 IPR028053 Membrane insertase YidC, N-terminal VM_15050 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 VM_15050 IPR038210 Membrane insertase YidC, periplasmic domain VM_15055 IPR002696 Putative membrane protein insertion efficiency factor VM_15060 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VM_15060 IPR020568 Ribosomal protein S5 domain 2-type fold VM_15060 IPR000100 Ribonuclease P VM_15065 IPR020939 Ribosomal protein L34, conserved site VM_15065 IPR000271 Ribosomal protein L34 VM_15070 IPR017871 ABC transporter, conserved site VM_15070 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_15070 IPR003593 AAA+ ATPase domain VM_15070 IPR003439 ABC transporter-like VM_15070 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type VM_15075 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VM_15075 IPR035906 MetI-like superfamily VM_15075 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain VM_15080 IPR001320 Ionotropic glutamate receptor VM_15080 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VM_15080 IPR018313 Solute-binding protein family 3, conserved site VM_15195 IPR000182 GNAT domain VM_15195 IPR016181 Acyl-CoA N-acyltransferase VM_15225 IPR036291 NAD(P)-binding domain superfamily VM_15225 IPR020904 Short-chain dehydrogenase/reductase, conserved site VM_15225 IPR002347 Short-chain dehydrogenase/reductase SDR VM_15245 IPR036291 NAD(P)-binding domain superfamily VM_15245 IPR002347 Short-chain dehydrogenase/reductase SDR VM_15245 IPR020904 Short-chain dehydrogenase/reductase, conserved site VM_15255 IPR028344 Toxin-antitoxin system, toxin component ParE1/4 VM_15255 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily VM_15255 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family VM_15260 IPR010985 Ribbon-helix-helix VM_15260 IPR022789 Antitoxin ParD VM_15260 IPR038296 Antitoxin ParD superfamily VM_15355 IPR000566 Lipocalin/cytosolic fatty-acid binding domain VM_15355 IPR022272 Lipocalin family conserved site VM_15355 IPR012674 Calycin VM_15355 IPR022271 Lipocalin, ApoD type VM_15355 IPR002446 Lipocalin, bacterial VM_15365 IPR004481 Sodium/potassium/calcium exchanger VM_15365 IPR004837 Sodium/calcium exchanger membrane region VM_15380 IPR002168 Lipase, GDXG, putative histidine active site VM_15380 IPR023508 Acetyl esterase VM_15380 IPR013094 Alpha/beta hydrolase fold-3 VM_15380 IPR029058 Alpha/Beta hydrolase fold VM_15380 IPR033140 Lipase, GDXG, putative serine active site VM_15425 IPR007344 GrpB/Dephospho-CoA kinase VM_15430 IPR016181 Acyl-CoA N-acyltransferase VM_15430 IPR000182 GNAT domain VM_15440 IPR003719 Phenazine biosynthesis PhzF protein VM_15505 IPR000620 EamA domain VM_15515 IPR011789 Cu(I)-responsive transcriptional regulator VM_15515 IPR015358 Transcription regulator MerR, DNA binding VM_15515 IPR000551 MerR-type HTH domain VM_15515 IPR009061 Putative DNA-binding domain superfamily VM_15520 IPR000847 Transcription regulator HTH, LysR VM_15520 IPR036388 Winged helix-like DNA-binding domain superfamily VM_15520 IPR036390 Winged helix DNA-binding domain superfamily VM_15520 IPR005119 LysR, substrate-binding VM_15525 IPR036259 MFS transporter superfamily VM_15525 IPR020846 Major facilitator superfamily domain VM_15525 IPR011701 Major facilitator superfamily VM_15540 IPR004675 Alkylhydroperoxidase AhpD core VM_15540 IPR003779 Carboxymuconolactone decarboxylase-like VM_15540 IPR029032 AhpD-like VM_15545 IPR009057 Homeobox-like domain superfamily VM_15545 IPR018060 DNA binding HTH domain, AraC-type VM_15545 IPR029062 Class I glutamine amidotransferase-like VM_15545 IPR018062 HTH domain AraC-type, conserved site VM_15545 IPR020449 Transcription regulator HTH, AraC- type VM_15550 IPR005669 Thiosulphate/Sulfate-binding protein VM_15550 IPR000957 Sulphate/thiosulphate-binding, conserved site VM_15550 IPR034408 Sulphate/thiosulphate-binding site VM_15560 IPR011059 Metal-dependent hydrolase, composite domain superfamily VM_15560 IPR033932 YtcJ like VM_15560 IPR032466 Metal-dependent hydrolase VM_15560 IPR013108 Amidohydrolase 3 VM_15590 IPR014710 RmlC-like jelly roll fold VM_15590 IPR037923 Transcription regulator HTH-like VM_15590 IPR009057 Homeobox-like domain superfamily VM_15590 IPR003313 AraC-type arabinose-binding/dimerisation domain VM_15590 IPR020449 Transcription regulator HTH, AraC- type VM_15590 IPR018062 HTH domain AraC-type, conserved site VM_15590 IPR018060 DNA binding HTH domain, AraC-type VM_15600 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic VM_15600 IPR001150 Glycine radical domain VM_15600 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VM_15600 IPR005144 ATP-cone domain VM_15605 IPR034457 Organic radical-activating enzymes VM_15605 IPR007197 Radical SAM VM_15605 IPR001989 Radical-activating enzyme, conserved site VM_15605 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic VM_15605 IPR013785 Aldolase-type TIM barrel VM_15610 IPR004839 Aminotransferase, class I/classII VM_15610 IPR015424 Pyridoxal phosphate-dependent transferase VM_15610 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VM_15610 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VM_15610 IPR000796 Aspartate/other aminotransferase VM_15615 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX VM_15615 IPR041107 RimK, PreATP-grasp domain VM_15615 IPR021109 Aspartic peptidase domain superfamily VM_15615 IPR013815 ATP-grasp fold, subdomain 1 VM_15615 IPR013651 ATP-grasp fold, RimK-type VM_15615 IPR011761 ATP-grasp fold VM_15615 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK VM_15620 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain VM_15620 IPR001633 EAL domain VM_15620 IPR035919 EAL domain superfamily VM_15625 IPR003352 Phosphotransferase system, EIIC VM_15625 IPR013011 Phosphotransferase system, EIIB component, type 2 VM_15625 IPR003501 Phosphotransferase system, EIIB component, type 2/3 VM_15625 IPR013014 Phosphotransferase system, EIIC component, type 2 VM_15625 IPR036095 PTS system IIB component-like superfamily VM_15625 IPR006327 Phosphotransferase system, fructose IIC component VM_15625 IPR003353 Phosphotransferase system, fructose-specific IIB subunit VM_15630 IPR017583 Tagatose/fructose phosphokinase VM_15630 IPR029056 Ribokinase-like VM_15630 IPR011611 Carbohydrate kinase PfkB VM_15630 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site VM_15630 IPR022463 Fructose 1-phosphate kinase VM_15635 IPR016152 Phosphotransferase/anion transporter VM_15635 IPR002178 PTS EIIA type-2 domain VM_15635 IPR002114 Phosphotransferase system, HPr serine phosphorylation site VM_15635 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site VM_15635 IPR035895 HPr-like superfamily VM_15635 IPR000032 Phosphocarrier protein HPr-like VM_15640 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VM_15640 IPR001761 Periplasmic binding protein/LacI sugar binding domain VM_15640 IPR028082 Periplasmic binding protein-like I VM_15640 IPR012781 D-fructose-responsive transcription factor VM_15640 IPR000843 LacI-type HTH domain VM_15645 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain VM_15645 IPR029052 Metallo-dependent phosphatase-like VM_15645 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type VM_15645 IPR026843 Nuclease SbcCD subunit D, C-terminal domain VM_15645 IPR004593 Nuclease SbcCD subunit D VM_15650 IPR038729 Rad50/SbcC-type AAA domain VM_15650 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_15655 IPR011006 CheY-like superfamily VM_15655 IPR003594 Histidine kinase/HSP90-like ATPase VM_15655 IPR001789 Signal transduction response regulator, receiver domain VM_15655 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_15655 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VM_15655 IPR005467 Histidine kinase domain VM_15655 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VM_15655 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VM_15660 IPR015424 Pyridoxal phosphate-dependent transferase VM_15660 IPR004839 Aminotransferase, class I/classII VM_15660 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VM_15660 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VM_15670 IPR001807 Chloride channel, voltage gated VM_15670 IPR023861 Chloride channel, ClcA VM_15670 IPR014743 Chloride channel, core VM_15675 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal VM_15675 IPR003495 CobW/HypB/UreG, nucleotide-binding domain VM_15675 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_15680 IPR016478 GTPase, MTG1 VM_15680 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_15680 IPR006073 GTP binding domain VM_15680 IPR019991 GTP-binding protein, ribosome biogenesis VM_15680 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily VM_15680 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain VM_15685 IPR026856 Sialidase family VM_15685 IPR036278 Sialidase superfamily VM_15685 IPR011040 Sialidase VM_15685 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily VM_15685 IPR015344 Vibrio cholerae neuraminidase, lectin-like domain VM_15690 IPR032466 Metal-dependent hydrolase VM_15690 IPR011059 Metal-dependent hydrolase, composite domain superfamily VM_15690 IPR003764 N-acetylglucosamine-6-phosphate deacetylase VM_15690 IPR006680 Amidohydrolase-related VM_15695 IPR000600 ROK family VM_15695 IPR023945 N-acetylmannosamine kinase, bacterial VM_15700 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase VM_15700 IPR011060 Ribulose-phosphate binding barrel VM_15700 IPR013785 Aldolase-type TIM barrel VM_15710 IPR004682 TRAP transporter solute receptor, DctP family VM_15710 IPR038404 TRAP transporter solute receptor DctP superfamily VM_15710 IPR018389 TRAP transporter solute receptor DctP/TeaA VM_15715 IPR007387 TRAP transporter, small membrane protein DctQ VM_15720 IPR004681 TRAP transporter large membrane protein DctM VM_15720 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VM_15725 IPR013785 Aldolase-type TIM barrel VM_15725 IPR002220 DapA-like VM_15725 IPR005264 N-acetylneuraminate lyase VM_15725 IPR020625 Schiff base-forming aldolase, active site VM_15730 IPR036388 Winged helix-like DNA-binding domain superfamily VM_15730 IPR001347 Sugar isomerase (SIS) VM_15730 IPR035472 RpiR-like, SIS domain VM_15730 IPR000281 Helix-turn-helix protein RpiR VM_15730 IPR009057 Homeobox-like domain superfamily VM_15735 IPR019936 Mutatrotase, YjhT-like VM_15735 IPR006652 Kelch repeat type 1 VM_15735 IPR015915 Kelch-type beta propeller VM_15740 IPR011498 Kelch repeat type 2 VM_15740 IPR019936 Mutatrotase, YjhT-like VM_15740 IPR015915 Kelch-type beta propeller VM_15755 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_15755 IPR033479 Double Cache domain 1 VM_15755 IPR000727 Target SNARE coiled-coil homology domain VM_15755 IPR003660 HAMP domain VM_15755 IPR004090 Chemotaxis methyl-accepting receptor VM_15755 IPR029151 Periplasmic sensor-like domain superfamily VM_15760 IPR003660 HAMP domain VM_15760 IPR029151 Periplasmic sensor-like domain superfamily VM_15760 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_15760 IPR033479 Double Cache domain 1 VM_15760 IPR004090 Chemotaxis methyl-accepting receptor VM_15760 IPR000727 Target SNARE coiled-coil homology domain VM_15765 IPR035919 EAL domain superfamily VM_15765 IPR000160 GGDEF domain VM_15765 IPR005330 MHYT domain VM_15765 IPR029787 Nucleotide cyclase VM_15765 IPR035965 PAS domain superfamily VM_15765 IPR001633 EAL domain VM_15775 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase VM_15775 IPR016174 Di-haem cytochrome, transmembrane VM_15780 IPR023480 Uncharacterised protein family UPF0312/YceI VM_15780 IPR007372 Lipid/polyisoprenoid-binding, YceI-like VM_15780 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily VM_15785 IPR024002 Formate/nitrite transporter, conserved site VM_15785 IPR023999 Formate transporter FocA, putative VM_15785 IPR000292 Formate/nitrite transporter VM_15785 IPR023271 Aquaporin-like VM_15790 IPR005119 LysR, substrate-binding VM_15790 IPR000847 Transcription regulator HTH, LysR VM_15790 IPR036388 Winged helix-like DNA-binding domain superfamily VM_15790 IPR036390 Winged helix DNA-binding domain superfamily VM_15795 IPR009476 Protein of unknown function DUF1097 VM_15800 IPR034139 OLD protein-like, TOPRIM domain VM_15800 IPR006171 TOPRIM domain VM_15800 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_15800 IPR022602 Protein of unknown function DUF2813 VM_15805 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type VM_15805 IPR036907 5'-Nucleotidase, C-terminal domain superfamily VM_15805 IPR006420 NAD pyrophosphatase/5-nucleotidase NadN VM_15805 IPR029052 Metallo-dependent phosphatase-like VM_15805 IPR006146 5'-Nucleotidase, conserved site VM_15805 IPR008334 5'-Nucleotidase, C-terminal VM_15805 IPR006179 5'-Nucleotidase/apyrase VM_15810 IPR022369 Integral membrane protein TerC, riboswitch-linked VM_15810 IPR005496 Integral membrane protein TerC VM_15820 IPR004624 PhnA protein VM_15820 IPR013987 PhnA protein, N-terminal VM_15820 IPR013988 PhnA protein, C-terminal VM_15855 IPR000160 GGDEF domain VM_15855 IPR033424 Membrane-associated sensor domain VM_15855 IPR029787 Nucleotide cyclase VM_15865 IPR009057 Homeobox-like domain superfamily VM_15865 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VM_15865 IPR001647 DNA-binding HTH domain, TetR-type VM_15875 IPR029055 Nucleophile aminohydrolases, N-terminal VM_15885 IPR001789 Signal transduction response regulator, receiver domain VM_15885 IPR029787 Nucleotide cyclase VM_15885 IPR000160 GGDEF domain VM_15885 IPR011006 CheY-like superfamily VM_15900 IPR036291 NAD(P)-binding domain superfamily VM_15900 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 VM_15900 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 VM_15900 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal VM_15900 IPR026255 NAD(P) transhydrogenase, alpha subunit VM_15900 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain VM_15900 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal VM_15905 IPR034300 NADP transhydrogenase beta-like domain VM_15905 IPR012136 NADP transhydrogenase, beta subunit VM_15905 IPR029035 DHS-like NAD/FAD-binding domain superfamily VM_15915 IPR016032 Signal transduction response regulator, C-terminal effector VM_15915 IPR001789 Signal transduction response regulator, receiver domain VM_15915 IPR011006 CheY-like superfamily VM_15915 IPR036388 Winged helix-like DNA-binding domain superfamily VM_15915 IPR001867 OmpR/PhoB-type DNA-binding domain VM_15915 IPR039420 Transcriptional regulatory protein WalR-like VM_15930 IPR005371 Uncharacterised protein family UPF0181 VM_15950 IPR039440 Domain of unknown function DUF3850 VM_15950 IPR015947 PUA-like superfamily VM_16060 IPR039426 Vitamin B12 transporter BtuB-like VM_16060 IPR012910 TonB-dependent receptor, plug domain VM_16060 IPR000531 TonB-dependent receptor-like, beta-barrel VM_16060 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VM_16060 IPR010105 TonB-dependent siderophore receptor VM_16065 IPR036259 MFS transporter superfamily VM_16065 IPR011701 Major facilitator superfamily VM_16065 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 VM_16070 IPR006162 Phosphopantetheine attachment site VM_16070 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VM_16070 IPR020806 Polyketide synthase, phosphopantetheine-binding domain VM_16070 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily VM_16070 IPR042099 AMP-dependent synthetase-like superfamily VM_16070 IPR000873 AMP-dependent synthetase/ligase VM_16070 IPR020845 AMP-binding, conserved site VM_16070 IPR036736 ACP-like superfamily VM_16070 IPR010071 Amino acid adenylation domain VM_16070 IPR013217 Methyltransferase type 12 VM_16070 IPR009081 Phosphopantetheine binding ACP domain VM_16070 IPR001242 Condensation domain VM_16075 IPR010071 Amino acid adenylation domain VM_16075 IPR036736 ACP-like superfamily VM_16075 IPR006162 Phosphopantetheine attachment site VM_16075 IPR009081 Phosphopantetheine binding ACP domain VM_16075 IPR020806 Polyketide synthase, phosphopantetheine-binding domain VM_16075 IPR010060 Non-ribosomal peptide synthase VM_16075 IPR001242 Condensation domain VM_16075 IPR042099 AMP-dependent synthetase-like superfamily VM_16075 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily VM_16075 IPR000873 AMP-dependent synthetase/ligase VM_16075 IPR020845 AMP-binding, conserved site VM_16075 IPR025110 AMP-binding enzyme, C-terminal domain VM_16085 IPR001031 Thioesterase VM_16085 IPR029058 Alpha/Beta hydrolase fold VM_16085 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS VM_16090 IPR015890 Chorismate-utilising enzyme, C-terminal VM_16090 IPR019999 Anthranilate synthase component I-like VM_16090 IPR005801 ADC synthase VM_16090 IPR019996 Salicylate synthase VM_16095 IPR000873 AMP-dependent synthetase/ligase VM_16095 IPR042099 AMP-dependent synthetase-like superfamily VM_16095 IPR025110 AMP-binding enzyme, C-terminal domain VM_16100 IPR003439 ABC transporter-like VM_16100 IPR017871 ABC transporter, conserved site VM_16100 IPR036640 ABC transporter type 1, transmembrane domain superfamily VM_16100 IPR011527 ABC transporter type 1, transmembrane domain VM_16100 IPR011917 ABC transporter, lipid A export, MsbA VM_16100 IPR003593 AAA+ ATPase domain VM_16100 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_16100 IPR039421 Type I protein exporter VM_16105 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_16105 IPR003439 ABC transporter-like VM_16105 IPR017871 ABC transporter, conserved site VM_16105 IPR003593 AAA+ ATPase domain VM_16105 IPR011527 ABC transporter type 1, transmembrane domain VM_16105 IPR036640 ABC transporter type 1, transmembrane domain superfamily VM_16110 IPR037143 4'-phosphopantetheinyl transferase domain superfamily VM_16110 IPR041354 4'-phosphopantetheinyl transferase, N-terminal domain VM_16110 IPR008278 4'-phosphopantetheinyl transferase domain VM_16110 IPR003542 Enterobactin synthetase-like, component D VM_16115 IPR036877 SUI1 domain superfamily VM_16115 IPR001950 SUI1 domain VM_16115 IPR005872 Archaeal/bacterial translation initiation factor SUI1 VM_16125 IPR005905 D-alanine--D-alanine ligase VM_16125 IPR016185 Pre-ATP-grasp domain superfamily VM_16125 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site VM_16125 IPR011127 D-alanine--D-alanine ligase, N-terminal domain VM_16125 IPR013815 ATP-grasp fold, subdomain 1 VM_16125 IPR011095 D-alanine--D-alanine ligase, C-terminal VM_16125 IPR011761 ATP-grasp fold VM_16135 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain VM_16135 IPR016102 Succinyl-CoA synthetase-like VM_16135 IPR000182 GNAT domain VM_16135 IPR003781 CoA-binding VM_16135 IPR013815 ATP-grasp fold, subdomain 1 VM_16135 IPR011761 ATP-grasp fold VM_16135 IPR016181 Acyl-CoA N-acyltransferase VM_16135 IPR036291 NAD(P)-binding domain superfamily VM_16140 IPR036388 Winged helix-like DNA-binding domain superfamily VM_16140 IPR000847 Transcription regulator HTH, LysR VM_16140 IPR036390 Winged helix DNA-binding domain superfamily VM_16140 IPR005119 LysR, substrate-binding VM_16145 IPR039426 Vitamin B12 transporter BtuB-like VM_16145 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor VM_16145 IPR012910 TonB-dependent receptor, plug domain VM_16145 IPR037066 TonB-dependent receptor, plug domain superfamily VM_16145 IPR000531 TonB-dependent receptor-like, beta-barrel VM_16145 IPR011276 TonB-dependent haem/haemoglobin receptor VM_16145 IPR010917 TonB-dependent receptor, conserved site VM_16150 IPR036390 Winged helix DNA-binding domain superfamily VM_16150 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain VM_16150 IPR023767 Transcriptional regulator SgrR VM_16150 IPR000914 Solute-binding protein family 5 domain VM_16150 IPR039424 Solute-binding protein family 5 VM_16160 IPR006683 Thioesterase domain VM_16160 IPR003736 Phenylacetic acid degradation-related domain VM_16160 IPR029069 HotDog domain superfamily VM_16180 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VM_16180 IPR004045 Glutathione S-transferase, N-terminal VM_16180 IPR036249 Thioredoxin-like superfamily VM_16180 IPR010987 Glutathione S-transferase, C-terminal-like VM_16180 IPR004046 Glutathione S-transferase, C-terminal VM_16205 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_16205 IPR003593 AAA+ ATPase domain VM_16205 IPR003439 ABC transporter-like VM_16205 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal VM_16205 IPR017871 ABC transporter, conserved site VM_16210 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VM_16210 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VM_16210 IPR035906 MetI-like superfamily VM_16215 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VM_16215 IPR035906 MetI-like superfamily VM_16220 IPR039424 Solute-binding protein family 5 VM_16220 IPR030678 Peptide/nickel binding protein, MppA-type VM_16220 IPR000914 Solute-binding protein family 5 domain VM_16245 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site VM_16245 IPR000109 Proton-dependent oligopeptide transporter family VM_16245 IPR036259 MFS transporter superfamily VM_16245 IPR020846 Major facilitator superfamily domain VM_16245 IPR005279 Dipeptide/tripeptide permease VM_16255 IPR000524 Transcription regulator HTH, GntR VM_16255 IPR017722 Phosphonate utilization transcriptional regulator PhnR VM_16255 IPR011663 UbiC transcription regulator-associated VM_16255 IPR036388 Winged helix-like DNA-binding domain superfamily VM_16255 IPR036390 Winged helix DNA-binding domain superfamily VM_16255 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VM_16260 IPR035906 MetI-like superfamily VM_16260 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VM_16265 IPR008995 Molybdate/tungstate binding, C-terminal VM_16265 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_16265 IPR015853 ABC transporter, ferric cation import, FbpC VM_16265 IPR017871 ABC transporter, conserved site VM_16265 IPR003439 ABC transporter-like VM_16265 IPR003593 AAA+ ATPase domain VM_16265 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 VM_16270 IPR026045 Ferric binding protein VM_16275 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VM_16275 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase VM_16275 IPR015424 Pyridoxal phosphate-dependent transferase VM_16275 IPR012703 2-aminoethylphosphonate--pyruvate transaminase VM_16275 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VM_16275 IPR000192 Aminotransferase class V domain VM_16285 IPR006323 Phosphonoacetaldehyde hydrolase VM_16285 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VM_16285 IPR023214 HAD superfamily VM_16285 IPR036412 HAD-like superfamily VM_16285 IPR006439 HAD hydrolase, subfamily IA VM_16285 IPR041492 Haloacid dehalogenase-like hydrolase VM_16290 IPR023459 Transcription elongation factor GreA/GreB family VM_16290 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily VM_16290 IPR028625 Regulator of nucleoside diphosphate kinase VM_16290 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain VM_16290 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal VM_16295 IPR023214 HAD superfamily VM_16295 IPR041492 Haloacid dehalogenase-like hydrolase VM_16295 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VM_16295 IPR006439 HAD hydrolase, subfamily IA VM_16295 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB VM_16295 IPR036412 HAD-like superfamily VM_16300 IPR005119 LysR, substrate-binding VM_16300 IPR036390 Winged helix DNA-binding domain superfamily VM_16300 IPR000847 Transcription regulator HTH, LysR VM_16300 IPR036388 Winged helix-like DNA-binding domain superfamily VM_16310 IPR026041 Glyoxalase ElbB VM_16310 IPR029062 Class I glutamine amidotransferase-like VM_16315 IPR039697 Iron-type alcohol dehydrogenase-like VM_16315 IPR018211 Alcohol dehydrogenase, iron-type, conserved site VM_16315 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA VM_16320 IPR019823 Large-conductance mechanosensitive channel, conserved site VM_16320 IPR001185 Large-conductance mechanosensitive channel VM_16320 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L VM_16320 IPR036019 Gated mechanosensitive channel VM_16325 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site VM_16325 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_16325 IPR000559 Formate-tetrahydrofolate ligase, FTHFS VM_16330 IPR011057 Mss4-like superfamily VM_16330 IPR002579 Peptide methionine sulphoxide reductase MrsB VM_16330 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily VM_16330 IPR002569 Peptide methionine sulphoxide reductase MsrA VM_16330 IPR028427 Peptide methionine sulfoxide reductase VM_16335 IPR001474 GTP cyclohydrolase I VM_16335 IPR020602 GTP cyclohydrolase I domain VM_16335 IPR018234 GTP cyclohydrolase I, conserved site VM_16340 IPR001453 MoaB/Mog domain VM_16340 IPR008284 Molybdenum cofactor biosynthesis, conserved site VM_16340 IPR036425 MoaB/Mog-like domain superfamily VM_16340 IPR038987 Molybdopterin biosynthesis protein MoeA-like VM_16340 IPR036135 MoeA, N-terminal and linker domain superfamily VM_16340 IPR005110 MoeA, N-terminal and linker domain VM_16340 IPR036688 MoeA, C-terminal, domain IV superfamily VM_16340 IPR005111 MoeA, C-terminal, domain IV VM_16345 IPR000594 THIF-type NAD/FAD binding fold VM_16345 IPR012730 Molybdopterin synthase sulfurylase MoeB VM_16345 IPR035985 Ubiquitin-activating enzyme VM_16355 IPR001307 Thiosulphate sulfurtransferase, conserved site VM_16355 IPR036873 Rhodanese-like domain superfamily VM_16355 IPR001763 Rhodanese-like domain VM_16360 IPR013540 Chitinase A N-terminal VM_16360 IPR011583 Chitinase II VM_16360 IPR029070 Chitinase insertion domain superfamily VM_16360 IPR001223 Glycoside hydrolase family 18, catalytic domain VM_16360 IPR001579 Glycoside hydrolase, chitinase active site VM_16360 IPR017853 Glycoside hydrolase superfamily VM_16360 IPR013783 Immunoglobulin-like fold VM_16360 IPR014756 Immunoglobulin E-set VM_16360 IPR036573 Carbohydrate-binding module superfamily 5/12 VM_16360 IPR002126 Cadherin-like VM_16360 IPR022409 PKD/Chitinase domain VM_16360 IPR003610 Carbohydrate-binding module family 5/12 VM_16365 IPR007324 Sugar-binding domain, putative VM_16365 IPR013324 RNA polymerase sigma factor, region 3/4-like VM_16365 IPR037171 NagB/RpiA transferase-like VM_16370 IPR001585 Transaldolase/Fructose-6-phosphate aldolase VM_16370 IPR018225 Transaldolase, active site VM_16370 IPR013785 Aldolase-type TIM barrel VM_16370 IPR004730 Transaldolase type 1 VM_16375 IPR029061 Thiamin diphosphate-binding fold VM_16375 IPR005478 Transketolase, bacterial-like VM_16375 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II VM_16375 IPR020826 Transketolase binding site VM_16375 IPR005474 Transketolase, N-terminal VM_16375 IPR033247 Transketolase family VM_16375 IPR033248 Transketolase, C-terminal domain VM_16375 IPR005475 Transketolase-like, pyrimidine-binding domain VM_16405 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VM_16405 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VM_16405 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain VM_16405 IPR036291 NAD(P)-binding domain superfamily VM_16430 IPR009707 Membrane protein GlpM/YdgC VM_16440 IPR036390 Winged helix DNA-binding domain superfamily VM_16440 IPR036388 Winged helix-like DNA-binding domain superfamily VM_16440 IPR000847 Transcription regulator HTH, LysR VM_16440 IPR005119 LysR, substrate-binding VM_16450 IPR000415 Nitroreductase-like VM_16450 IPR029479 Nitroreductase VM_16450 IPR033878 Nitroreductase NfsB-like VM_16455 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VM_16455 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 VM_16455 IPR001036 Acriflavin resistance protein VM_16470 IPR007272 Sulphur transport domain VM_16475 IPR036388 Winged helix-like DNA-binding domain superfamily VM_16475 IPR001845 HTH ArsR-type DNA-binding domain VM_16475 IPR011991 ArsR-like helix-turn-helix domain VM_16475 IPR036390 Winged helix DNA-binding domain superfamily VM_16485 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily VM_16485 IPR017758 Coenzyme A disulphide reductase VM_16485 IPR036188 FAD/NAD(P)-binding domain superfamily VM_16485 IPR023536 Coenzyme A disulphide reductase, staphyolococci VM_16485 IPR023753 FAD/NAD(P)-binding domain VM_16485 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VM_16490 IPR005119 LysR, substrate-binding VM_16490 IPR000847 Transcription regulator HTH, LysR VM_16490 IPR036388 Winged helix-like DNA-binding domain superfamily VM_16490 IPR036390 Winged helix DNA-binding domain superfamily VM_16495 IPR030196 Multidrug resistance protein MdtN VM_16495 IPR005694 Efflux pump membrane protein VM_16495 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VM_16550 IPR031656 Alpha-glycerophosphate oxidase, C-terminal VM_16550 IPR006076 FAD dependent oxidoreductase VM_16550 IPR036188 FAD/NAD(P)-binding domain superfamily VM_16550 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase VM_16550 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily VM_16555 IPR004090 Chemotaxis methyl-accepting receptor VM_16555 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_16555 IPR003660 HAMP domain VM_16560 IPR006664 Outer membrane protein, bacterial VM_16560 IPR006665 OmpA-like domain VM_16560 IPR006690 Outer membrane protein, OmpA-like, conserved site VM_16560 IPR036737 OmpA-like domain superfamily VM_16565 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily VM_16565 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal VM_16565 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VM_16570 IPR012337 Ribonuclease H-like superfamily VM_16570 IPR002559 Transposase, IS4-like VM_16570 IPR003201 Transposase Tn5, dimerisation VM_16570 IPR038215 Transposase, Tn5-like, N-terminal domain superfamily VM_16570 IPR014737 Transposase, Tn5-like, C-terminal VM_16570 IPR014736 Transposase, Tn5-like, core VM_16570 IPR014735 Transposase, Tn5-like, N-terminal VM_16575 IPR036412 HAD-like superfamily VM_16575 IPR006439 HAD hydrolase, subfamily IA VM_16575 IPR041492 Haloacid dehalogenase-like hydrolase VM_16575 IPR023214 HAD superfamily VM_16575 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VM_16575 IPR010976 Beta-phosphoglucomutase hydrolase VM_16580 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_16580 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain VM_16580 IPR003660 HAMP domain VM_16580 IPR000727 Target SNARE coiled-coil homology domain VM_16580 IPR004090 Chemotaxis methyl-accepting receptor VM_16585 IPR004669 C4-dicarboxylate anaerobic carrier VM_16585 IPR018385 C4-dicarboxylate anaerobic carrier-like VM_16590 IPR005130 Serine dehydratase-like, alpha subunit VM_16590 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form VM_16590 IPR029009 Allosteric substrate binding domain superfamily VM_16590 IPR005131 Serine dehydratase beta chain VM_16595 IPR011006 CheY-like superfamily VM_16595 IPR001789 Signal transduction response regulator, receiver domain VM_16595 IPR016032 Signal transduction response regulator, C-terminal effector VM_16595 IPR000792 Transcription regulator LuxR, C-terminal VM_16600 IPR005467 Histidine kinase domain VM_16600 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VM_16600 IPR003660 HAMP domain VM_16600 IPR003594 Histidine kinase/HSP90-like ATPase VM_16600 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain VM_16600 IPR042295 NarX-like, N-terminal domain superfamily VM_16600 IPR029095 NarX-like, N-terminal VM_16600 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing VM_16605 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VM_16605 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VM_16605 IPR004496 Ferredoxin-type protein NapF VM_16615 IPR010051 Periplasmic nitrate reductase, large subunit VM_16615 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain VM_16615 IPR006657 Molybdopterin dinucleotide-binding domain VM_16615 IPR009010 Aspartate decarboxylase-like domain superfamily VM_16615 IPR006311 Twin-arginine translocation pathway, signal sequence VM_16615 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site VM_16615 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain VM_16615 IPR006656 Molybdopterin oxidoreductase VM_16620 IPR011031 Multihaem cytochrome VM_16620 IPR036280 Multiheme cytochrome superfamily VM_16620 IPR005591 Nitrate reductase cytochrome c-type subunit NapB VM_16625 IPR038266 NapC/NirT cytochrome c superfamily VM_16625 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT VM_16625 IPR005126 NapC/NirT cytochrome c, N-terminal VM_16625 IPR024717 Denitrification system component NapC/NirT/NrfH VM_16625 IPR036280 Multiheme cytochrome superfamily VM_16625 IPR011031 Multihaem cytochrome VM_16635 IPR006675 HDIG domain VM_16635 IPR006674 HD domain VM_16635 IPR003607 HD/PDEase domain VM_16635 IPR037522 HD-GYP domain VM_16640 IPR016032 Signal transduction response regulator, C-terminal effector VM_16640 IPR001789 Signal transduction response regulator, receiver domain VM_16640 IPR000792 Transcription regulator LuxR, C-terminal VM_16640 IPR011006 CheY-like superfamily VM_16645 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VM_16645 IPR007895 MASE1 VM_16645 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain VM_16645 IPR003594 Histidine kinase/HSP90-like ATPase VM_16645 IPR005467 Histidine kinase domain VM_16650 IPR020846 Major facilitator superfamily domain VM_16650 IPR036259 MFS transporter superfamily VM_16650 IPR021159 Glycerate/sugar phosphate transporter, conserved site VM_16650 IPR000849 Sugar phosphate transporter VM_16650 IPR011701 Major facilitator superfamily VM_16655 IPR026045 Ferric binding protein VM_16660 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VM_16660 IPR035906 MetI-like superfamily VM_16665 IPR017871 ABC transporter, conserved site VM_16665 IPR015853 ABC transporter, ferric cation import, FbpC VM_16665 IPR003593 AAA+ ATPase domain VM_16665 IPR008995 Molybdate/tungstate binding, C-terminal VM_16665 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_16665 IPR013611 Transport-associated OB, type 2 VM_16665 IPR003439 ABC transporter-like VM_16705 IPR022399 Helicase/secretion neighbourhood ATPase VM_16705 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_16705 IPR001482 Type II/IV secretion system protein VM_16720 IPR001775 GspD/PilQ family VM_16720 IPR007055 BON domain VM_16720 IPR032789 Pilus formation protein, N-terminal VM_16720 IPR004846 Type II/III secretion system VM_16720 IPR014004 Transport-associated and nodulation domain, bacteria VM_16740 IPR000847 Transcription regulator HTH, LysR VM_16740 IPR005119 LysR, substrate-binding VM_16740 IPR036388 Winged helix-like DNA-binding domain superfamily VM_16740 IPR036390 Winged helix DNA-binding domain superfamily VM_16750 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I VM_16750 IPR029058 Alpha/Beta hydrolase fold VM_16750 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain VM_16760 IPR002155 Thiolase VM_16760 IPR020613 Thiolase, conserved site VM_16760 IPR020615 Thiolase, acyl-enzyme intermediate active site VM_16760 IPR020610 Thiolase, active site VM_16760 IPR020617 Thiolase, C-terminal VM_16760 IPR020616 Thiolase, N-terminal VM_16760 IPR016039 Thiolase-like VM_16765 IPR011283 Acetoacetyl-CoA reductase VM_16765 IPR036291 NAD(P)-binding domain superfamily VM_16765 IPR020904 Short-chain dehydrogenase/reductase, conserved site VM_16765 IPR002347 Short-chain dehydrogenase/reductase SDR VM_16770 IPR036515 Transposase IS200-like superfamily VM_16770 IPR002686 Transposase IS200-like VM_16775 IPR017853 Glycoside hydrolase superfamily VM_16775 IPR014756 Immunoglobulin E-set VM_16775 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal VM_16775 IPR029018 Beta-hexosaminidase-like, domain 2 VM_16775 IPR013783 Immunoglobulin-like fold VM_16775 IPR015883 Glycoside hydrolase family 20, catalytic domain VM_16775 IPR012291 CBM2, carbohydrate-binding domain superfamily VM_16775 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain VM_16775 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily VM_16775 IPR025705 Beta-hexosaminidase VM_16775 IPR004867 Chitobiase C-terminal domain VM_16785 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit VM_16785 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily VM_16790 IPR004501 Phosphotransferase system, EIIC component, type 3 VM_16790 IPR004796 Phosphotransferase system, cellobiose-type IIC component VM_16790 IPR003352 Phosphotransferase system, EIIC VM_16795 IPR036095 PTS system IIB component-like superfamily VM_16795 IPR013012 Phosphotransferase system, EIIB component, type 3 VM_16795 IPR003501 Phosphotransferase system, EIIB component, type 2/3 VM_16800 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VM_16800 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VM_16800 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VM_16800 IPR005665 Protein-export membrane protein SecF, bacterial VM_16805 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VM_16805 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VM_16805 IPR001036 Acriflavin resistance protein VM_16805 IPR027398 SecD export protein N-terminal TM domain VM_16805 IPR005791 Protein translocase subunit SecD VM_16805 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VM_16820 IPR029787 Nucleotide cyclase VM_16820 IPR000160 GGDEF domain VM_16820 IPR033424 Membrane-associated sensor domain VM_16825 IPR011831 Glucose-1-phosphate adenylyltransferase VM_16825 IPR005835 Nucleotidyl transferase domain VM_16825 IPR011004 Trimeric LpxA-like superfamily VM_16825 IPR029044 Nucleotide-diphospho-sugar transferases VM_16825 IPR005836 ADP-glucose pyrophosphorylase, conserved site VM_16825 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial VM_16830 IPR003610 Carbohydrate-binding module family 5/12 VM_16830 IPR017853 Glycoside hydrolase superfamily VM_16830 IPR009470 Chitinase, C-terminal VM_16830 IPR011583 Chitinase II VM_16830 IPR029070 Chitinase insertion domain superfamily VM_16830 IPR001223 Glycoside hydrolase family 18, catalytic domain VM_16830 IPR013783 Immunoglobulin-like fold VM_16830 IPR036573 Carbohydrate-binding module superfamily 5/12 VM_16835 IPR018211 Alcohol dehydrogenase, iron-type, conserved site VM_16835 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA VM_16845 IPR002078 RNA polymerase sigma factor 54 interaction domain VM_16845 IPR001789 Signal transduction response regulator, receiver domain VM_16845 IPR025944 Sigma-54 interaction domain, conserved site VM_16845 IPR011006 CheY-like superfamily VM_16845 IPR009057 Homeobox-like domain superfamily VM_16845 IPR002197 DNA binding HTH domain, Fis-type VM_16845 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_16850 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VM_16850 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VM_16850 IPR005467 Histidine kinase domain VM_16850 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VM_16850 IPR003594 Histidine kinase/HSP90-like ATPase VM_16850 IPR033479 Double Cache domain 1 VM_16850 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) VM_16850 IPR029151 Periplasmic sensor-like domain superfamily VM_16850 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_16865 IPR011701 Major facilitator superfamily VM_16865 IPR020846 Major facilitator superfamily domain VM_16865 IPR036259 MFS transporter superfamily VM_16865 IPR021159 Glycerate/sugar phosphate transporter, conserved site VM_16865 IPR000849 Sugar phosphate transporter VM_16870 IPR040442 Pyruvate kinase-like domain superfamily VM_16870 IPR011037 Pyruvate kinase-like, insert domain superfamily VM_16870 IPR018209 Pyruvate kinase, active site VM_16870 IPR015793 Pyruvate kinase, barrel VM_16870 IPR015795 Pyruvate kinase, C-terminal VM_16870 IPR036918 Pyruvate kinase, C-terminal domain superfamily VM_16870 IPR001697 Pyruvate kinase VM_16870 IPR015806 Pyruvate kinase, insert domain superfamily VM_16870 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily VM_16875 IPR005467 Histidine kinase domain VM_16875 IPR038188 TorS, sensor domain superfamily VM_16875 IPR001789 Signal transduction response regulator, receiver domain VM_16875 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain VM_16875 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_16875 IPR037952 Sensor histidine kinase TorS, sensor domain VM_16875 IPR036641 HPT domain superfamily VM_16875 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VM_16875 IPR011006 CheY-like superfamily VM_16875 IPR003660 HAMP domain VM_16875 IPR003594 Histidine kinase/HSP90-like ATPase VM_16875 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VM_16875 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VM_16880 IPR014301 TMAO reductase system, periplasmic protein TorT VM_16880 IPR001761 Periplasmic binding protein/LacI sugar binding domain VM_16880 IPR028082 Periplasmic binding protein-like I VM_16885 IPR004363 Methylglyoxal synthase VM_16885 IPR018148 Methylglyoxal synthase, active site VM_16885 IPR011607 Methylglyoxal synthase-like domain VM_16885 IPR036914 Methylglyoxal synthase-like domain superfamily VM_16900 IPR000829 DAGK family VM_16900 IPR036945 Diacylglycerol kinase (DAGK) superfamily VM_16900 IPR033718 Diacylglycerol kinase, prokaryotic VM_16915 IPR025711 PepSY domain VM_16915 IPR013856 Peptidase M4 domain VM_16915 IPR001570 Peptidase M4, C-terminal VM_16915 IPR027268 Peptidase M4/M1, CTD superfamily VM_16915 IPR023612 Peptidase M4 VM_16915 IPR011096 FTP domain VM_16920 IPR000212 DNA helicase, UvrD/REP type VM_16920 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_16920 IPR022161 DNA helicase IV, N-terminal domain VM_16920 IPR034739 UvrD/AddA helicase, N-terminal VM_16920 IPR014016 UvrD-like helicase, ATP-binding domain VM_16920 IPR014017 UvrD-like DNA helicase, C-terminal VM_16925 IPR032692 Integral membrane protein YccS, N-terminal VM_16925 IPR010020 Integral membrane protein, YccS/YhfK VM_16925 IPR010019 Integral membrane protein, YccS VM_16945 IPR008995 Molybdate/tungstate binding, C-terminal VM_16945 IPR011868 Molybdate ABC transporter, ATP-binding protein VM_16945 IPR003593 AAA+ ATPase domain VM_16945 IPR017871 ABC transporter, conserved site VM_16945 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_16945 IPR005116 Transport-associated OB, type 1 VM_16945 IPR003439 ABC transporter-like VM_16945 IPR015852 ABC transporter, molybdenum import, ModC VM_16945 IPR004606 Molybdenum-pterin binding VM_16950 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VM_16950 IPR011867 Molybdate ABC transporter, permease protein VM_16950 IPR035906 MetI-like superfamily VM_16955 IPR005950 Molybdate ABC transporter, substrate-binding protein VM_16960 IPR033949 Cobyric acid synthase, glutamine amidotransferase type 1 VM_16960 IPR017929 CobB/CobQ glutamine amidotransferase VM_16960 IPR029062 Class I glutamine amidotransferase-like VM_16960 IPR004459 Cobyric acid synthase CobQ VM_16960 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain VM_16960 IPR011698 CobB/CobQ-like glutamine amidotransferase VM_16960 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_16980 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VM_16980 IPR015387 LuxQ, periplasmic VM_16980 IPR029151 Periplasmic sensor-like domain superfamily VM_16980 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VM_16980 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_16980 IPR001789 Signal transduction response regulator, receiver domain VM_16980 IPR011006 CheY-like superfamily VM_16980 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VM_16980 IPR005467 Histidine kinase domain VM_16980 IPR003594 Histidine kinase/HSP90-like ATPase VM_16985 IPR025997 Periplasmic binding protein VM_16985 IPR028082 Periplasmic binding protein-like I VM_16995 IPR000305 GIY-YIG endonuclease VM_16995 IPR035901 GIY-YIG endonuclease superfamily VM_17000 IPR036388 Winged helix-like DNA-binding domain superfamily VM_17000 IPR036390 Winged helix DNA-binding domain superfamily VM_17000 IPR007432 Protein of unknown function DUF480 VM_17010 IPR007458 Protein of unknown function DUF496 VM_17020 IPR018485 Carbohydrate kinase, FGGY, C-terminal VM_17020 IPR018483 Carbohydrate kinase, FGGY, conserved site VM_17020 IPR018484 Carbohydrate kinase, FGGY, N-terminal VM_17020 IPR000577 Carbohydrate kinase, FGGY VM_17020 IPR005999 Glycerol kinase VM_17025 IPR022357 Major intrinsic protein, conserved site VM_17025 IPR023271 Aquaporin-like VM_17025 IPR000425 Major intrinsic protein VM_17035 IPR007419 BFD-like [2Fe-2S]-binding domain VM_17035 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit VM_17035 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase VM_17035 IPR036188 FAD/NAD(P)-binding domain superfamily VM_17035 IPR006076 FAD dependent oxidoreductase VM_17035 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily VM_17040 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain VM_17040 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit VM_17040 IPR036188 FAD/NAD(P)-binding domain superfamily VM_17045 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit VM_17045 IPR004017 Cysteine-rich domain VM_17045 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VM_17045 IPR009051 Alpha-helical ferredoxin VM_17045 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VM_17055 IPR001173 Glycosyltransferase 2-like VM_17055 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA VM_17055 IPR029044 Nucleotide-diphospho-sugar transferases VM_17065 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal VM_17065 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VM_17065 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 VM_17065 IPR016039 Thiolase-like VM_17070 IPR013766 Thioredoxin domain VM_17070 IPR017937 Thioredoxin, conserved site VM_17070 IPR005746 Thioredoxin VM_17070 IPR036249 Thioredoxin-like superfamily VM_17075 IPR023745 MSF-type transporter, YcaD VM_17075 IPR020846 Major facilitator superfamily domain VM_17075 IPR011701 Major facilitator superfamily VM_17075 IPR036259 MFS transporter superfamily VM_17080 IPR020483 Uncharacterised protein family YgbA VM_17100 IPR006656 Molybdopterin oxidoreductase VM_17100 IPR010046 Oxidoreductase alpha (molybdopterin) subunit VM_17100 IPR009010 Aspartate decarboxylase-like domain superfamily VM_17100 IPR006657 Molybdopterin dinucleotide-binding domain VM_17100 IPR041953 YdeP, molybdopterin-binding oxidoreductase-like domain VM_17100 IPR037951 YdeP-like, MopB domain VM_17105 IPR000847 Transcription regulator HTH, LysR VM_17105 IPR005119 LysR, substrate-binding VM_17105 IPR037411 HTH-type transcriptional regulator AlsR, PBP2 domain VM_17105 IPR036390 Winged helix DNA-binding domain superfamily VM_17105 IPR036388 Winged helix-like DNA-binding domain superfamily VM_17110 IPR003786 Sulfur carrier protein FdhD VM_17110 IPR016193 Cytidine deaminase-like VM_17115 IPR035906 MetI-like superfamily VM_17115 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VM_17115 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain VM_17120 IPR035906 MetI-like superfamily VM_17120 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VM_17120 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain VM_17125 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter VM_17125 IPR018313 Solute-binding protein family 3, conserved site VM_17125 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VM_17125 IPR001320 Ionotropic glutamate receptor VM_17130 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_17130 IPR017871 ABC transporter, conserved site VM_17130 IPR003439 ABC transporter-like VM_17130 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type VM_17130 IPR003593 AAA+ ATPase domain VM_17140 IPR023481 Uncharacterised protein family ViaA VM_17140 IPR008912 Uncharacterised protein family CoxE-like VM_17140 IPR002035 von Willebrand factor, type A VM_17140 IPR036465 von Willebrand factor A-like domain superfamily VM_17145 IPR022547 ATPase, RavA, C-terminal VM_17145 IPR011704 ATPase, dynein-related, AAA domain VM_17145 IPR023671 ATPase RavA VM_17145 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_17145 IPR003593 AAA+ ATPase domain VM_17145 IPR041538 ATPase RavA-like, AAA lid domain VM_17150 IPR020476 NUDIX hydrolase VM_17150 IPR020084 NUDIX hydrolase, conserved site VM_17150 IPR015797 NUDIX hydrolase-like domain superfamily VM_17150 IPR000086 NUDIX hydrolase domain VM_17155 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase VM_17155 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VM_17155 IPR015424 Pyridoxal phosphate-dependent transferase VM_17155 IPR023603 Threonine aldolase VM_17155 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VM_17160 IPR024167 Cytochrome c4-like VM_17160 IPR036909 Cytochrome c-like domain superfamily VM_17160 IPR009056 Cytochrome c-like domain VM_17170 IPR028622 ATP-dependent RNA helicase RhlE VM_17170 IPR011545 DEAD/DEAH box helicase domain VM_17170 IPR014014 RNA helicase, DEAD-box type, Q motif VM_17170 IPR014001 Helicase superfamily 1/2, ATP-binding domain VM_17170 IPR001650 Helicase, C-terminal VM_17170 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_17170 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VM_17175 IPR007431 Acyl carrier protein phosphodiesterase VM_17175 IPR023491 Acyl carrier protein phosphodiesterase, gammaproteobacteria VM_17185 IPR018227 Amino acid/polyamine transporter 2 VM_17185 IPR013061 Tryptophan/tryrosine permease, conserved site VM_17185 IPR013059 Tryptophan/tyrosine transporter VM_17190 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain VM_17190 IPR003660 HAMP domain VM_17190 IPR004090 Chemotaxis methyl-accepting receptor VM_17190 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_17190 IPR000727 Target SNARE coiled-coil homology domain VM_17195 IPR036291 NAD(P)-binding domain superfamily VM_17195 IPR005886 UDP-glucose 4-epimerase VM_17195 IPR016040 NAD(P)-binding domain VM_17200 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel VM_17200 IPR005501 LamB/YcsF/PxpA-like VM_17205 IPR010016 KipI family VM_17205 IPR003833 Carboxyltransferase domain, subdomain C and D VM_17205 IPR029000 Cyclophilin-like domain superfamily VM_17210 IPR003778 Carboxyltransferase domain, subdomain A and B VM_17210 IPR029000 Cyclophilin-like domain superfamily VM_17220 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal VM_17220 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation VM_17220 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type VM_17220 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily VM_17220 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal VM_17220 IPR017476 UDP-glucose/GDP-mannose dehydrogenase VM_17220 IPR036291 NAD(P)-binding domain superfamily VM_17220 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily VM_17225 IPR038766 Membrane component of ABC transporter, predicted VM_17230 IPR003439 ABC transporter-like VM_17230 IPR017871 ABC transporter, conserved site VM_17230 IPR003593 AAA+ ATPase domain VM_17230 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_17235 IPR013830 SGNH hydrolase-type esterase domain VM_17235 IPR036514 SGNH hydrolase superfamily VM_17235 IPR008265 Lipase, GDSL, active site VM_17240 IPR010758 Trans-2-enoyl-CoA reductase VM_17240 IPR024906 Enoyl reductase FAD binding domain VM_17240 IPR036291 NAD(P)-binding domain superfamily VM_17240 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative VM_17245 IPR008984 SMAD/FHA domain superfamily VM_17245 IPR029787 Nucleotide cyclase VM_17245 IPR000160 GGDEF domain VM_17245 IPR000253 Forkhead-associated (FHA) domain VM_17245 IPR035919 EAL domain superfamily VM_17245 IPR001633 EAL domain VM_17255 IPR001305 Heat shock protein DnaJ, cysteine-rich domain VM_17255 IPR008971 HSP40/DnaJ peptide-binding VM_17255 IPR018253 DnaJ domain, conserved site VM_17255 IPR001623 DnaJ domain VM_17255 IPR002939 Chaperone DnaJ, C-terminal VM_17255 IPR012724 Chaperone DnaJ VM_17255 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily VM_17255 IPR036869 Chaperone J-domain superfamily VM_17275 IPR023733 Pyrophosphatase PpaX VM_17275 IPR006439 HAD hydrolase, subfamily IA VM_17275 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VM_17275 IPR023214 HAD superfamily VM_17275 IPR036412 HAD-like superfamily VM_17275 IPR041492 Haloacid dehalogenase-like hydrolase VM_17290 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site VM_17290 IPR029056 Ribokinase-like VM_17290 IPR011611 Carbohydrate kinase PfkB VM_17295 IPR002686 Transposase IS200-like VM_17295 IPR036515 Transposase IS200-like superfamily VM_17300 IPR000917 Sulfatase, N-terminal VM_17300 IPR012160 Lipoteichoic acid synthase-like VM_17300 IPR017850 Alkaline-phosphatase-like, core domain superfamily VM_17310 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain VM_17310 IPR014014 RNA helicase, DEAD-box type, Q motif VM_17310 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_17310 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily VM_17310 IPR001650 Helicase, C-terminal VM_17310 IPR034415 CsdA, RNA recognition motif VM_17310 IPR014001 Helicase superfamily 1/2, ATP-binding domain VM_17310 IPR028618 ATP-dependent RNA helicase DeaD VM_17310 IPR011545 DEAD/DEAH box helicase domain VM_17310 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VM_17315 IPR013223 Ribonuclease B, N-terminal OB domain VM_17315 IPR011804 Ribonuclease II VM_17315 IPR012340 Nucleic acid-binding, OB-fold VM_17315 IPR001900 Ribonuclease II/R VM_17315 IPR011129 Cold shock domain VM_17315 IPR022966 Ribonuclease II/R, conserved site VM_17315 IPR003029 S1 domain VM_17315 IPR004476 Ribonuclease II/ribonuclease R VM_17325 IPR024370 PBP domain VM_17325 IPR011862 Phosphate binding protein VM_17335 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily VM_17335 IPR007357 Deoxyribodipyrimidine photolyase-related protein VM_17335 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_17340 IPR004302 Cellulose/chitin-binding protein, N-terminal VM_17340 IPR041029 N-acetylglucosamine binding protein A domain 2 VM_17340 IPR020879 N-acetylglucosamine-binding protein A VM_17340 IPR014756 Immunoglobulin E-set VM_17370 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA VM_17370 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VM_17370 IPR001036 Acriflavin resistance protein VM_17385 IPR001851 ABC transporter, permease VM_17390 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_17390 IPR015861 ABC transporter, ribose import, RbsA VM_17390 IPR003593 AAA+ ATPase domain VM_17390 IPR003439 ABC transporter-like VM_17390 IPR017871 ABC transporter, conserved site VM_17395 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA VM_17395 IPR018211 Alcohol dehydrogenase, iron-type, conserved site VM_17395 IPR039697 Iron-type alcohol dehydrogenase-like VM_17400 IPR001303 Class II aldolase/adducin N-terminal VM_17400 IPR004782 L-fucose phosphate aldolase VM_17400 IPR036409 Class II aldolase/adducin N-terminal domain superfamily VM_17405 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU VM_17405 IPR023751 L-fucose mutarotase VM_17405 IPR023750 RbsD-like superfamily VM_17410 IPR018483 Carbohydrate kinase, FGGY, conserved site VM_17410 IPR018485 Carbohydrate kinase, FGGY, C-terminal VM_17410 IPR000577 Carbohydrate kinase, FGGY VM_17410 IPR013450 L-fuculokinase VM_17410 IPR018484 Carbohydrate kinase, FGGY, N-terminal VM_17415 IPR012889 L-fucose isomerase, N-terminal-2 VM_17415 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily VM_17415 IPR005763 L-fucose isomerase VM_17415 IPR012888 L-fucose isomerase, N-terminal-1 VM_17415 IPR038391 L-fucose isomerase, domain 1 superfamily VM_17415 IPR015888 L-fucose isomerase, C-terminal VM_17415 IPR038393 L-fucose isomerase, domain 3 superfamily VM_17415 IPR038392 L-fucose isomerase, domain 2 superfamily VM_17415 IPR004216 L-fucose/L-arabinose isomerase, C-terminal VM_17420 IPR037171 NagB/RpiA transferase-like VM_17420 IPR036390 Winged helix DNA-binding domain superfamily VM_17420 IPR036388 Winged helix-like DNA-binding domain superfamily VM_17420 IPR018356 Transcription regulator, HTH DeoR-type, conserved site VM_17420 IPR001034 DeoR-type HTH domain VM_17420 IPR014036 DeoR C-terminal sensor domain VM_17425 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VM_17425 IPR023951 L-ascorbate-6-phosphate lactonase UlaG VM_17430 IPR036390 Winged helix DNA-binding domain superfamily VM_17430 IPR014036 DeoR C-terminal sensor domain VM_17430 IPR023711 Transcription regulator HTH, UlaR VM_17430 IPR018356 Transcription regulator, HTH DeoR-type, conserved site VM_17430 IPR037171 NagB/RpiA transferase-like VM_17430 IPR036388 Winged helix-like DNA-binding domain superfamily VM_17430 IPR001034 DeoR-type HTH domain VM_17435 IPR004703 Phosphotransferase system, sugar-specific permease component VM_17440 IPR016152 Phosphotransferase/anion transporter VM_17440 IPR002178 PTS EIIA type-2 domain VM_17445 IPR001303 Class II aldolase/adducin N-terminal VM_17445 IPR036409 Class II aldolase/adducin N-terminal domain superfamily VM_17445 IPR023499 L-ribulose-5-phosphate 4-epimerase UlaF VM_17450 IPR006379 HAD-superfamily hydrolase, subfamily IIB VM_17450 IPR000150 Cof family VM_17450 IPR036412 HAD-like superfamily VM_17450 IPR023214 HAD superfamily VM_17455 IPR011060 Ribulose-phosphate binding barrel VM_17455 IPR041710 HPS/KGPDC domain VM_17455 IPR013785 Aldolase-type TIM barrel VM_17455 IPR001754 Orotidine 5'-phosphate decarboxylase domain VM_17460 IPR001719 AP endonuclease 2 VM_17460 IPR004560 L-ribulose-5-phosphate 3-epimerase VM_17460 IPR036237 Xylose isomerase-like superfamily VM_17460 IPR013022 Xylose isomerase-like, TIM barrel domain VM_17475 IPR003807 Domain of unknown function DUF202 VM_17480 IPR009057 Homeobox-like domain superfamily VM_17480 IPR035472 RpiR-like, SIS domain VM_17480 IPR001347 Sugar isomerase (SIS) VM_17480 IPR036388 Winged helix-like DNA-binding domain superfamily VM_17480 IPR000281 Helix-turn-helix protein RpiR VM_17485 IPR003352 Phosphotransferase system, EIIC VM_17485 IPR013013 Phosphotransferase system, EIIC component, type 1 VM_17485 IPR001996 Phosphotransferase system, IIB component, type 1 VM_17485 IPR036878 Glucose permease domain IIB VM_17485 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site VM_17490 IPR001347 Sugar isomerase (SIS) VM_17490 IPR040190 N-acetylmuramic acid 6-phosphate etherase/glucokinase regulatory protein VM_17490 IPR005486 Glucokinase regulatory protein, conserved site VM_17490 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ VM_17515 IPR000847 Transcription regulator HTH, LysR VM_17515 IPR005119 LysR, substrate-binding VM_17515 IPR036388 Winged helix-like DNA-binding domain superfamily VM_17515 IPR036390 Winged helix DNA-binding domain superfamily VM_17530 IPR023865 Aliphatic acid kinase, short-chain, conserved site VM_17530 IPR004372 Acetate/propionate kinase VM_17530 IPR000890 Aliphatic acid kinase, short-chain VM_17540 IPR011276 TonB-dependent haem/haemoglobin receptor VM_17540 IPR039426 Vitamin B12 transporter BtuB-like VM_17540 IPR012910 TonB-dependent receptor, plug domain VM_17540 IPR037066 TonB-dependent receptor, plug domain superfamily VM_17540 IPR000531 TonB-dependent receptor-like, beta-barrel VM_17540 IPR010916 TonB box, conserved site VM_17540 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VM_17540 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor VM_17545 IPR009057 Homeobox-like domain superfamily VM_17545 IPR018060 DNA binding HTH domain, AraC-type VM_17545 IPR018062 HTH domain AraC-type, conserved site VM_17550 IPR003439 ABC transporter-like VM_17550 IPR003593 AAA+ ATPase domain VM_17550 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_17550 IPR017871 ABC transporter, conserved site VM_17555 IPR000522 ABC transporter, permease protein, BtuC-like VM_17555 IPR037294 ABC transporter, BtuC-like VM_17560 IPR037294 ABC transporter, BtuC-like VM_17560 IPR000522 ABC transporter, permease protein, BtuC-like VM_17580 IPR012300 Peptidase M6, InhA VM_17580 IPR008757 Peptidase M6-like, domain VM_17580 IPR000601 PKD domain VM_17580 IPR035986 PKD domain superfamily VM_17580 IPR013783 Immunoglobulin-like fold VM_17580 IPR022409 PKD/Chitinase domain VM_17585 IPR004090 Chemotaxis methyl-accepting receptor VM_17585 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain VM_17585 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_17585 IPR000727 Target SNARE coiled-coil homology domain VM_17585 IPR003660 HAMP domain VM_17590 IPR036435 Leukocidin/porin MspA superfamily VM_17590 IPR035992 Ricin B-like lectins VM_17590 IPR016183 Leukocidin/Hemolysin toxin VM_17590 IPR000772 Ricin B, lectin domain VM_17590 IPR036404 Jacalin-like lectin domain superfamily VM_17590 IPR022220 Hemolytic toxin, N-terminal VM_17590 IPR032496 Hemolysin, beta-prism lectin VM_17595 IPR001087 GDSL lipase/esterase VM_17595 IPR036514 SGNH hydrolase superfamily VM_17595 IPR008265 Lipase, GDSL, active site VM_17600 IPR000700 PAS-associated, C-terminal VM_17600 IPR035965 PAS domain superfamily VM_17600 IPR013656 PAS fold-4 VM_17600 IPR029787 Nucleotide cyclase VM_17600 IPR000014 PAS domain VM_17600 IPR000160 GGDEF domain VM_17610 IPR036259 MFS transporter superfamily VM_17610 IPR004734 Multidrug resistance protein VM_17610 IPR011701 Major facilitator superfamily VM_17610 IPR020846 Major facilitator superfamily domain VM_17615 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal VM_17625 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VM_17625 IPR003594 Histidine kinase/HSP90-like ATPase VM_17625 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VM_17625 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VM_17625 IPR005467 Histidine kinase domain VM_17625 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_17625 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VM_17630 IPR021800 Domain of unknown function DUF3369 VM_17630 IPR003607 HD/PDEase domain VM_17630 IPR011006 CheY-like superfamily VM_17630 IPR037522 HD-GYP domain VM_17630 IPR001789 Signal transduction response regulator, receiver domain VM_17635 IPR000727 Target SNARE coiled-coil homology domain VM_17635 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain VM_17635 IPR003660 HAMP domain VM_17635 IPR004090 Chemotaxis methyl-accepting receptor VM_17635 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_17640 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_17640 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase VM_17640 IPR004821 Cytidyltransferase-like domain VM_17645 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_17645 IPR003694 NAD(+) synthetase VM_17645 IPR022310 NAD/GMP synthase VM_17645 IPR022926 NH(3)-dependent NAD(+) synthetase VM_17650 IPR004668 Anaerobic c4-dicarboxylate membrane transporter VM_17655 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_17655 IPR011545 DEAD/DEAH box helicase domain VM_17655 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VM_17655 IPR014014 RNA helicase, DEAD-box type, Q motif VM_17655 IPR014001 Helicase superfamily 1/2, ATP-binding domain VM_17655 IPR001650 Helicase, C-terminal VM_17655 IPR028622 ATP-dependent RNA helicase RhlE VM_17660 IPR036515 Transposase IS200-like superfamily VM_17660 IPR002686 Transposase IS200-like VM_17670 IPR022951 Uncharacterised protein family UPF0309 VM_17670 IPR035472 RpiR-like, SIS domain VM_17670 IPR001347 Sugar isomerase (SIS) VM_17675 IPR001347 Sugar isomerase (SIS) VM_17675 IPR022951 Uncharacterised protein family UPF0309 VM_17675 IPR035472 RpiR-like, SIS domain VM_17685 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit VM_17690 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup VM_17690 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily VM_17690 IPR004720 Phosphotransferase system, sorbose subfamily IIB component VM_17710 IPR011013 Galactose mutarotase-like domain superfamily VM_17710 IPR000322 Glycoside hydrolase family 31 VM_17710 IPR033403 Domain of unknown function DUF5110 VM_17710 IPR013780 Glycosyl hydrolase, all-beta VM_17710 IPR017853 Glycoside hydrolase superfamily VM_17710 IPR037524 PA14/GLEYA domain VM_17710 IPR032513 Alpha-glucosidase, domain of unknown function DUF4968 VM_17715 IPR000917 Sulfatase, N-terminal VM_17715 IPR024607 Sulfatase, conserved site VM_17715 IPR017850 Alkaline-phosphatase-like, core domain superfamily VM_17730 IPR037923 Transcription regulator HTH-like VM_17730 IPR009057 Homeobox-like domain superfamily VM_17730 IPR018060 DNA binding HTH domain, AraC-type VM_17730 IPR003313 AraC-type arabinose-binding/dimerisation domain VM_17730 IPR014710 RmlC-like jelly roll fold VM_17740 IPR004682 TRAP transporter solute receptor, DctP family VM_17740 IPR018389 TRAP transporter solute receptor DctP/TeaA VM_17740 IPR038404 TRAP transporter solute receptor DctP superfamily VM_17745 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VM_17745 IPR004681 TRAP transporter large membrane protein DctM VM_17750 IPR008928 Six-hairpin glycosidase superfamily VM_17750 IPR010905 Glycosyl hydrolase, family 88 VM_17750 IPR012341 Six-hairpin glycosidase-like superfamily VM_17755 IPR000524 Transcription regulator HTH, GntR VM_17755 IPR036390 Winged helix DNA-binding domain superfamily VM_17755 IPR036388 Winged helix-like DNA-binding domain superfamily VM_17755 IPR011663 UbiC transcription regulator-associated VM_17755 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VM_17760 IPR022951 Uncharacterised protein family UPF0309 VM_17760 IPR001347 Sugar isomerase (SIS) VM_17760 IPR035472 RpiR-like, SIS domain VM_17765 IPR004703 Phosphotransferase system, sugar-specific permease component VM_17780 IPR016152 Phosphotransferase/anion transporter VM_17780 IPR002178 PTS EIIA type-2 domain VM_17790 IPR001559 Phosphotriesterase VM_17790 IPR017947 Aryldialkylphosphatase, zinc-binding site VM_17790 IPR032466 Metal-dependent hydrolase VM_17800 IPR005993 GMP reductase VM_17800 IPR013785 Aldolase-type TIM barrel VM_17800 IPR001093 IMP dehydrogenase/GMP reductase VM_17800 IPR015875 IMP dehydrogenase / GMP reductase, conserved site VM_17810 IPR028325 Voltage-gated potassium channel VM_17810 IPR013099 Potassium channel domain VM_17820 IPR036291 NAD(P)-binding domain superfamily VM_17820 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VM_17820 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain VM_17820 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VM_17820 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 VM_17825 IPR036652 YjeF N-terminal domain superfamily VM_17825 IPR004443 YjeF N-terminal domain VM_17825 IPR017953 Carbohydrate kinase, predicted, conserved site VM_17825 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase VM_17825 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr VM_17825 IPR029056 Ribokinase-like VM_17835 IPR011006 CheY-like superfamily VM_17835 IPR001789 Signal transduction response regulator, receiver domain VM_17850 IPR005589 Alternative ribosome-rescue factor A VM_17855 IPR012156 Cold shock, CspA VM_17855 IPR011129 Cold shock domain VM_17855 IPR002059 Cold-shock protein, DNA-binding VM_17855 IPR012340 Nucleic acid-binding, OB-fold VM_17860 IPR000971 Globin VM_17860 IPR009050 Globin-like superfamily VM_17860 IPR012292 Globin/Protoglobin VM_17860 IPR023950 Flavohemoprotein VM_17860 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VM_17860 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase VM_17860 IPR017927 FAD-binding domain, ferredoxin reductase-type VM_17860 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain VM_17860 IPR017938 Riboflavin synthase-like beta-barrel VM_17860 IPR001433 Oxidoreductase FAD/NAD(P)-binding VM_17865 IPR025944 Sigma-54 interaction domain, conserved site VM_17865 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VM_17865 IPR002078 RNA polymerase sigma factor 54 interaction domain VM_17865 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_17865 IPR009057 Homeobox-like domain superfamily VM_17865 IPR029016 GAF-like domain superfamily VM_17865 IPR003018 GAF domain VM_17865 IPR003593 AAA+ ATPase domain VM_17865 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VM_17875 IPR003201 Transposase Tn5, dimerisation VM_17875 IPR012337 Ribonuclease H-like superfamily VM_17875 IPR038215 Transposase, Tn5-like, N-terminal domain superfamily VM_17875 IPR014735 Transposase, Tn5-like, N-terminal VM_17875 IPR002559 Transposase, IS4-like VM_17875 IPR014736 Transposase, Tn5-like, core VM_17875 IPR014737 Transposase, Tn5-like, C-terminal VM_17880 IPR036264 Bacterial exopeptidase dimerisation domain VM_17880 IPR011650 Peptidase M20, dimerisation domain VM_17880 IPR002933 Peptidase M20 VM_17880 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site VM_17880 IPR010161 Peptidase M20B, tripeptide aminopeptidase VM_17885 IPR002668 Concentrative nucleoside transporter N-terminal domain VM_17885 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain VM_17885 IPR011657 Concentrative nucleoside transporter C-terminal domain VM_17885 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial VM_17885 IPR008276 Concentrative nucleoside transporter VM_17900 IPR033479 Double Cache domain 1 VM_17900 IPR003660 HAMP domain VM_17900 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_17905 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_17905 IPR041628 ChlI/MoxR, AAA lid domain VM_17905 IPR011703 ATPase, AAA-3 VM_17910 IPR002881 Domain of unknown function DUF58 VM_17910 IPR036465 von Willebrand factor A-like domain superfamily VM_17925 IPR022933 Uncharacterised protein family UPF0353 VM_17925 IPR002035 von Willebrand factor, type A VM_17925 IPR036465 von Willebrand factor A-like domain superfamily VM_17940 IPR012340 Nucleic acid-binding, OB-fold VM_17940 IPR012156 Cold shock, CspA VM_17940 IPR011129 Cold shock domain VM_17940 IPR019844 Cold-shock (CSD) domain VM_17940 IPR002059 Cold-shock protein, DNA-binding VM_17945 IPR013656 PAS fold-4 VM_17945 IPR001633 EAL domain VM_17945 IPR035919 EAL domain superfamily VM_17945 IPR000160 GGDEF domain VM_17945 IPR000014 PAS domain VM_17945 IPR035965 PAS domain superfamily VM_17945 IPR029787 Nucleotide cyclase VM_17955 IPR024530 Putative quorum-sensing-regulated virulence factor VM_17965 IPR011166 Beta-eliminating lyase family VM_17965 IPR015424 Pyridoxal phosphate-dependent transferase VM_17965 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VM_17965 IPR013440 Tryptophanase VM_17965 IPR018176 Tryptophanase, conserved site VM_17965 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase VM_17965 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VM_17970 IPR013061 Tryptophan/tryrosine permease, conserved site VM_17970 IPR018227 Amino acid/polyamine transporter 2 VM_17970 IPR013059 Tryptophan/tyrosine transporter VM_17975 IPR032781 ABC-transporter extension domain VM_17975 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily VM_17975 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_17975 IPR032524 ABC transporter Uup, C-terminal VM_17975 IPR003593 AAA+ ATPase domain VM_17975 IPR003439 ABC transporter-like VM_17975 IPR017871 ABC transporter, conserved site VM_17980 IPR017938 Riboflavin synthase-like beta-barrel VM_17980 IPR001433 Oxidoreductase FAD/NAD(P)-binding VM_17980 IPR023950 Flavohemoprotein VM_17980 IPR017927 FAD-binding domain, ferredoxin reductase-type VM_17980 IPR009050 Globin-like superfamily VM_17980 IPR000971 Globin VM_17980 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VM_17980 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain VM_17980 IPR012292 Globin/Protoglobin VM_17985 IPR000843 LacI-type HTH domain VM_17985 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VM_17985 IPR028082 Periplasmic binding protein-like I VM_17990 IPR002178 PTS EIIA type-2 domain VM_17990 IPR016152 Phosphotransferase/anion transporter VM_18000 IPR004703 Phosphotransferase system, sugar-specific permease component VM_18005 IPR023635 Peptide deformylase VM_18005 IPR036821 Peptide deformylase superfamily VM_18010 IPR019503 Peptidase M66 domain VM_18010 IPR013783 Immunoglobulin-like fold VM_18010 IPR036116 Fibronectin type III superfamily VM_18010 IPR022218 ToxR activated gene A lipoprotein domain VM_18010 IPR003961 Fibronectin type III VM_18015 IPR030862 L-2-hydroxyglutarate dehydrogenase VM_18015 IPR036188 FAD/NAD(P)-binding domain superfamily VM_18015 IPR006076 FAD dependent oxidoreductase VM_18035 IPR011006 CheY-like superfamily VM_18035 IPR009057 Homeobox-like domain superfamily VM_18035 IPR002197 DNA binding HTH domain, Fis-type VM_18035 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_18035 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VM_18035 IPR002078 RNA polymerase sigma factor 54 interaction domain VM_18035 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VM_18035 IPR025944 Sigma-54 interaction domain, conserved site VM_18035 IPR001789 Signal transduction response regulator, receiver domain VM_18035 IPR003593 AAA+ ATPase domain VM_18040 IPR000524 Transcription regulator HTH, GntR VM_18040 IPR004839 Aminotransferase, class I/classII VM_18040 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VM_18040 IPR015424 Pyridoxal phosphate-dependent transferase VM_18040 IPR036390 Winged helix DNA-binding domain superfamily VM_18040 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VM_18040 IPR036388 Winged helix-like DNA-binding domain superfamily VM_18050 IPR003594 Histidine kinase/HSP90-like ATPase VM_18050 IPR033479 Double Cache domain 1 VM_18050 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VM_18050 IPR005467 Histidine kinase domain VM_18050 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VM_18050 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VM_18050 IPR029151 Periplasmic sensor-like domain superfamily VM_18050 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) VM_18050 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_18065 IPR036259 MFS transporter superfamily VM_18065 IPR011701 Major facilitator superfamily VM_18065 IPR021159 Glycerate/sugar phosphate transporter, conserved site VM_18065 IPR020846 Major facilitator superfamily domain VM_18065 IPR000849 Sugar phosphate transporter VM_18065 IPR005267 Glycerol-3-phosphate transporter VM_18070 IPR030395 Glycerophosphodiester phosphodiesterase domain VM_18070 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily VM_18080 IPR000845 Nucleoside phosphorylase domain VM_18080 IPR035994 Nucleoside phosphorylase superfamily VM_18080 IPR010058 Uridine phosphorylase VM_18080 IPR018016 Nucleoside phosphorylase, conserved site VM_18085 IPR006419 Nicotinamide mononucleotide transporter PnuC VM_18090 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VM_18090 IPR000843 LacI-type HTH domain VM_18090 IPR028082 Periplasmic binding protein-like I VM_18095 IPR029056 Ribokinase-like VM_18095 IPR011611 Carbohydrate kinase PfkB VM_18095 IPR011877 Ribokinase VM_18095 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site VM_18095 IPR002139 Ribokinase/fructokinase VM_18100 IPR025997 Periplasmic binding protein VM_18100 IPR028082 Periplasmic binding protein-like I VM_18105 IPR001851 ABC transporter, permease VM_18110 IPR003593 AAA+ ATPase domain VM_18110 IPR003439 ABC transporter-like VM_18110 IPR015861 ABC transporter, ribose import, RbsA VM_18110 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_18110 IPR017871 ABC transporter, conserved site VM_18115 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU VM_18115 IPR023064 D-ribose pyranase VM_18115 IPR023750 RbsD-like superfamily VM_18140 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset VM_18140 IPR032074 Actin cross-linking domain VM_18140 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein VM_18140 IPR037026 Vgr protein, OB-fold domain superfamily VM_18140 IPR006531 Gp5 N-terminal VM_18175 IPR041546 ClpA/ClpB, AAA lid domain VM_18175 IPR003959 ATPase, AAA-type, core VM_18175 IPR018368 ClpA/B, conserved site 1 VM_18175 IPR001270 ClpA/B family VM_18175 IPR004176 Clp, N-terminal VM_18175 IPR036628 Clp, N-terminal domain superfamily VM_18175 IPR019489 Clp ATPase, C-terminal VM_18175 IPR003593 AAA+ ATPase domain VM_18175 IPR017729 Type VI secretion system, ATPase ClpV1 VM_18175 IPR028299 ClpA/B, conserved site 2 VM_18175 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_18235 IPR020103 Pseudouridine synthase, catalytic domain superfamily VM_18235 IPR006145 Pseudouridine synthase, RsuA/RluA VM_18235 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site VM_18235 IPR006225 Pseudouridine synthase, RluC/RluD VM_18240 IPR011547 SLC26A/SulP transporter domain VM_18240 IPR036513 STAS domain superfamily VM_18240 IPR002645 STAS domain VM_18240 IPR001902 SLC26A/SulP transporter VM_18245 IPR041492 Haloacid dehalogenase-like hydrolase VM_18245 IPR006439 HAD hydrolase, subfamily IA VM_18245 IPR036412 HAD-like superfamily VM_18245 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VM_18245 IPR023214 HAD superfamily VM_18250 IPR035919 EAL domain superfamily VM_18250 IPR001633 EAL domain VM_18250 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain VM_18255 IPR001763 Rhodanese-like domain VM_18255 IPR023695 Thiosulfate sulfurtransferase, bacterial VM_18255 IPR036873 Rhodanese-like domain superfamily VM_18260 IPR036291 NAD(P)-binding domain superfamily VM_18260 IPR004104 Oxidoreductase, C-terminal VM_18260 IPR000683 Oxidoreductase, N-terminal VM_18265 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase VM_18265 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain VM_18265 IPR006406 Nicotinate phosphoribosyltransferase VM_18265 IPR007229 Nicotinate phosphoribosyltransferase family VM_18265 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal VM_18275 IPR001570 Peptidase M4, C-terminal VM_18275 IPR002884 P domain VM_18275 IPR013783 Immunoglobulin-like fold VM_18275 IPR008979 Galactose-binding-like domain superfamily VM_18275 IPR011096 FTP domain VM_18275 IPR015919 Cadherin-like superfamily VM_18275 IPR027268 Peptidase M4/M1, CTD superfamily VM_18275 IPR023612 Peptidase M4 VM_18275 IPR013856 Peptidase M4 domain VM_18275 IPR006644 Dystroglycan-type cadherin-like VM_18295 IPR002852 Uncharacterised protein family UPF0251 VM_18310 IPR001991 Sodium:dicarboxylate symporter VM_18310 IPR036458 Sodium:dicarboxylate symporter superfamily VM_18310 IPR034703 Proton/glutamate-aspartate symporter GltP VM_18310 IPR033380 Glutamate-aspartate symport protein GltP/GltT VM_18310 IPR018107 Sodium:dicarboxylate symporter, conserved site VM_18315 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain VM_18320 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain VM_18325 IPR004680 Citrate transporter-like domain VM_18330 IPR001789 Signal transduction response regulator, receiver domain VM_18330 IPR028141 Transcriptional regulator VM_18330 IPR024187 Signal transduction response regulator, citrate/malate metabolism VM_18330 IPR011006 CheY-like superfamily VM_18335 IPR003594 Histidine kinase/HSP90-like ATPase VM_18335 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VM_18335 IPR035965 PAS domain superfamily VM_18335 IPR000014 PAS domain VM_18335 IPR033463 Single cache domain 3 VM_18335 IPR029151 Periplasmic sensor-like domain superfamily VM_18335 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_18335 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB VM_18335 IPR005467 Histidine kinase domain VM_18340 IPR001898 Solute carrier family 13 VM_18340 IPR030676 Citrate carrier CitT-related VM_18350 IPR036388 Winged helix-like DNA-binding domain superfamily VM_18350 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily VM_18350 IPR023546 Methylated-DNA--protein-cysteine methyltransferase VM_18350 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain VM_18350 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding VM_18350 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site VM_18350 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain VM_18355 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal VM_18355 IPR003265 HhH-GPD domain VM_18355 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal VM_18355 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily VM_18355 IPR000035 Alkylbase DNA glycosidase, conserved site VM_18355 IPR011257 DNA glycosylase VM_18360 IPR032808 DoxX family VM_18365 IPR036390 Winged helix DNA-binding domain superfamily VM_18365 IPR020890 Transcription regulator HTH, HdfR VM_18365 IPR005119 LysR, substrate-binding VM_18365 IPR000847 Transcription regulator HTH, LysR VM_18365 IPR036388 Winged helix-like DNA-binding domain superfamily VM_18385 IPR037171 NagB/RpiA transferase-like VM_18385 IPR018321 Glucosamine-6-phosphate isomerase, conserved site VM_18385 IPR004547 Glucosamine-6-phosphate isomerase VM_18385 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase VM_18395 IPR010794 Maltose operon periplasmic VM_18400 IPR003192 Porin, LamB-type VM_18400 IPR036998 Porin, LamB-type superfamily VM_18400 IPR023738 Maltoporin VM_18405 IPR011837 Glycogen debranching enzyme, GlgX type VM_18405 IPR013783 Immunoglobulin-like fold VM_18405 IPR004193 Glycoside hydrolase, family 13, N-terminal VM_18405 IPR014756 Immunoglobulin E-set VM_18405 IPR006047 Glycosyl hydrolase, family 13, catalytic domain VM_18405 IPR013780 Glycosyl hydrolase, all-beta VM_18405 IPR017853 Glycoside hydrolase superfamily VM_18410 IPR001046 NRAMP family VM_18420 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_18420 IPR004090 Chemotaxis methyl-accepting receptor VM_18420 IPR003660 HAMP domain VM_18430 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_18430 IPR003660 HAMP domain VM_18445 IPR011767 Glutaredoxin active site VM_18445 IPR002109 Glutaredoxin VM_18445 IPR036249 Thioredoxin-like superfamily VM_18445 IPR014025 Glutaredoxin subgroup VM_18445 IPR011900 Glutaredoxin, GrxC VM_18450 IPR018060 DNA binding HTH domain, AraC-type VM_18450 IPR009057 Homeobox-like domain superfamily VM_18450 IPR032783 AraC-type transcription regulator, ligand-binding domain VM_18450 IPR018062 HTH domain AraC-type, conserved site VM_18470 IPR004778 Homoserine/Threonine efflux protein VM_18470 IPR001123 Amino acid exporter protein, LeuE-type VM_18485 IPR000847 Transcription regulator HTH, LysR VM_18485 IPR005119 LysR, substrate-binding VM_18485 IPR036388 Winged helix-like DNA-binding domain superfamily VM_18485 IPR036390 Winged helix DNA-binding domain superfamily VM_18490 IPR022616 Glycosyl hydrolase, family 4, C-terminal VM_18490 IPR019802 Glycoside hydrolase, family 4, conserved site VM_18490 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal VM_18490 IPR036291 NAD(P)-binding domain superfamily VM_18490 IPR001088 Glycoside hydrolase, family 4 VM_18500 IPR001650 Helicase, C-terminal VM_18500 IPR014001 Helicase superfamily 1/2, ATP-binding domain VM_18500 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_18500 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VM_18500 IPR014014 RNA helicase, DEAD-box type, Q motif VM_18500 IPR011545 DEAD/DEAH box helicase domain VM_18500 IPR028622 ATP-dependent RNA helicase RhlE VM_18505 IPR004628 Mannonate dehydratase VM_18505 IPR036237 Xylose isomerase-like superfamily VM_18510 IPR036388 Winged helix-like DNA-binding domain superfamily VM_18510 IPR000524 Transcription regulator HTH, GntR VM_18510 IPR008920 Transcription regulator FadR/GntR, C-terminal VM_18510 IPR011711 GntR, C-terminal VM_18510 IPR036390 Winged helix DNA-binding domain superfamily VM_18515 IPR038404 TRAP transporter solute receptor DctP superfamily VM_18515 IPR018389 TRAP transporter solute receptor DctP/TeaA VM_18515 IPR004682 TRAP transporter solute receptor, DctP family VM_18520 IPR007387 TRAP transporter, small membrane protein DctQ VM_18525 IPR004681 TRAP transporter large membrane protein DctM VM_18525 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VM_18530 IPR036291 NAD(P)-binding domain superfamily VM_18530 IPR013328 6-phosphogluconate dehydrogenase, domain 2 VM_18530 IPR000669 Mannitol dehydrogenase VM_18530 IPR013118 Mannitol dehydrogenase, C-terminal VM_18530 IPR023027 Mannitol dehydrogenase, conserved site VM_18530 IPR013131 Mannitol dehydrogenase, N-terminal VM_18530 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily VM_18535 IPR003766 Uronate isomerase VM_18535 IPR032466 Metal-dependent hydrolase VM_18540 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site VM_18540 IPR011611 Carbohydrate kinase PfkB VM_18540 IPR029056 Ribokinase-like VM_18545 IPR031337 KDPG/KHG aldolase, active site 1 VM_18545 IPR031338 KDPG/KHG aldolase, active site 2 VM_18545 IPR000887 KDPG/KHG aldolase VM_18545 IPR013785 Aldolase-type TIM barrel VM_18550 IPR026267 Inner membrane protein YgjV VM_18550 IPR019629 Uncharacterised protein family HI1736/YgjV VM_18555 IPR005119 LysR, substrate-binding VM_18555 IPR000847 Transcription regulator HTH, LysR VM_18555 IPR036388 Winged helix-like DNA-binding domain superfamily VM_18555 IPR036390 Winged helix DNA-binding domain superfamily VM_18565 IPR013785 Aldolase-type TIM barrel VM_18565 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal VM_18570 IPR039446 Transcriptional regulator DauR-like VM_18570 IPR039445 Transcriptional regulator DauR-like, HTH domain VM_18570 IPR013559 YheO-like VM_18575 IPR021144 Uncharacterised protein family UPF0597 VM_18575 IPR005130 Serine dehydratase-like, alpha subunit VM_18580 IPR019897 RidA, conserved site VM_18580 IPR006056 RidA family VM_18580 IPR006175 YjgF/YER057c/UK114 family VM_18580 IPR035959 RutC-like superfamily VM_18595 IPR039421 Type I protein exporter VM_18595 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_18595 IPR003593 AAA+ ATPase domain VM_18595 IPR011527 ABC transporter type 1, transmembrane domain VM_18595 IPR036640 ABC transporter type 1, transmembrane domain superfamily VM_18595 IPR017871 ABC transporter, conserved site VM_18595 IPR003439 ABC transporter-like VM_18605 IPR001123 Amino acid exporter protein, LeuE-type VM_18605 IPR004778 Homoserine/Threonine efflux protein VM_18610 IPR011051 RmlC-like cupin domain superfamily VM_18610 IPR018060 DNA binding HTH domain, AraC-type VM_18610 IPR009057 Homeobox-like domain superfamily VM_18610 IPR018062 HTH domain AraC-type, conserved site VM_18625 IPR011234 Fumarylacetoacetase-like, C-terminal VM_18625 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily VM_18630 IPR036390 Winged helix DNA-binding domain superfamily VM_18630 IPR000835 MarR-type HTH domain VM_18630 IPR036388 Winged helix-like DNA-binding domain superfamily VM_18635 IPR015946 K homology domain-like, alpha/beta VM_18635 IPR036102 OsmC/Ohr superfamily VM_18635 IPR003718 OsmC/Ohr family VM_18635 IPR019953 Organic hydroperoxide resistance protein famiy VM_18640 IPR033900 Porin domain, Gram-negative type VM_18640 IPR023614 Porin domain superfamily VM_18645 IPR000620 EamA domain VM_18650 IPR011767 Glutaredoxin active site VM_18650 IPR037944 Peroxiredoxin-5-like VM_18650 IPR011906 Glutaredoxin domain VM_18650 IPR014025 Glutaredoxin subgroup VM_18650 IPR013740 Redoxin VM_18650 IPR036249 Thioredoxin-like superfamily VM_18650 IPR002109 Glutaredoxin VM_18665 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal VM_18665 IPR029045 ClpP/crotonase-like domain superfamily VM_18665 IPR041010 Acetyl-coA carboxylase zinc finger domain VM_18665 IPR034733 Acetyl-CoA carboxylase VM_18665 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit VM_18670 IPR036388 Winged helix-like DNA-binding domain superfamily VM_18670 IPR005119 LysR, substrate-binding VM_18670 IPR036390 Winged helix DNA-binding domain superfamily VM_18670 IPR000847 Transcription regulator HTH, LysR VM_18675 IPR004772 TrkH potassium transport family VM_18675 IPR003445 Cation transporter VM_18680 IPR003148 Regulator of K+ conductance, N-terminal VM_18680 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily VM_18680 IPR006037 Regulator of K+ conductance, C-terminal VM_18680 IPR036291 NAD(P)-binding domain superfamily VM_18685 IPR036388 Winged helix-like DNA-binding domain superfamily VM_18685 IPR039420 Transcriptional regulatory protein WalR-like VM_18685 IPR001789 Signal transduction response regulator, receiver domain VM_18685 IPR011006 CheY-like superfamily VM_18685 IPR001867 OmpR/PhoB-type DNA-binding domain VM_18690 IPR029016 GAF-like domain superfamily VM_18690 IPR025201 Sensor protein KdpD, transmembrane domain VM_18690 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VM_18690 IPR005467 Histidine kinase domain VM_18690 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VM_18690 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VM_18690 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal VM_18690 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_18690 IPR038318 KdpD, transmembrane domain superfamily VM_18690 IPR003594 Histidine kinase/HSP90-like ATPase VM_18690 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_18700 IPR010211 Redox-sensitive transcriptional activator SoxR VM_18700 IPR015358 Transcription regulator MerR, DNA binding VM_18700 IPR000551 MerR-type HTH domain VM_18700 IPR009061 Putative DNA-binding domain superfamily VM_18705 IPR036259 MFS transporter superfamily VM_18705 IPR020846 Major facilitator superfamily domain VM_18705 IPR011701 Major facilitator superfamily VM_18705 IPR004734 Multidrug resistance protein VM_18710 IPR036390 Winged helix DNA-binding domain superfamily VM_18710 IPR036388 Winged helix-like DNA-binding domain superfamily VM_18710 IPR000847 Transcription regulator HTH, LysR VM_18710 IPR005119 LysR, substrate-binding VM_18715 IPR035919 EAL domain superfamily VM_18715 IPR000160 GGDEF domain VM_18715 IPR005330 MHYT domain VM_18715 IPR001633 EAL domain VM_18715 IPR029787 Nucleotide cyclase VM_18720 IPR011055 Duplicated hybrid motif VM_18720 IPR013731 Opacity-associated protein A, N-terminal VM_18720 IPR018392 LysM domain VM_18720 IPR016047 Peptidase M23 VM_18730 IPR011547 SLC26A/SulP transporter domain VM_18730 IPR002645 STAS domain VM_18730 IPR001902 SLC26A/SulP transporter VM_18730 IPR036513 STAS domain superfamily VM_18745 IPR001633 EAL domain VM_18745 IPR029787 Nucleotide cyclase VM_18745 IPR000160 GGDEF domain VM_18745 IPR005330 MHYT domain VM_18745 IPR035919 EAL domain superfamily VM_18750 IPR003593 AAA+ ATPase domain VM_18750 IPR003439 ABC transporter-like VM_18750 IPR017871 ABC transporter, conserved site VM_18750 IPR005670 Phosphate transport system permease protein 1 VM_18750 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_18750 IPR015850 ABC transporter, phosphate import, PstB VM_18755 IPR035906 MetI-like superfamily VM_18755 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VM_18755 IPR005672 Phosphate transport system permease protein PstA VM_18760 IPR011864 Phosphate ABC transporter, permease protein PstC VM_18760 IPR035906 MetI-like superfamily VM_18760 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VM_18765 IPR024370 PBP domain VM_18765 IPR011862 Phosphate binding protein VM_18770 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_18770 IPR003660 HAMP domain VM_18770 IPR000727 Target SNARE coiled-coil homology domain VM_18770 IPR004090 Chemotaxis methyl-accepting receptor VM_18770 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain VM_18775 IPR014014 RNA helicase, DEAD-box type, Q motif VM_18775 IPR011545 DEAD/DEAH box helicase domain VM_18775 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VM_18775 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_18775 IPR001650 Helicase, C-terminal VM_18775 IPR014001 Helicase superfamily 1/2, ATP-binding domain VM_18775 IPR028621 ATP-dependent RNA helicase SrmB VM_18785 IPR041597 L,D-transpeptidase C-terminal domain VM_18785 IPR018392 LysM domain VM_18785 IPR038063 L,D-transpeptidase catalytic domain-like VM_18785 IPR005490 L,D-transpeptidase catalytic domain VM_18790 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain VM_18790 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily VM_18790 IPR006050 DNA photolyase, N-terminal VM_18790 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily VM_18790 IPR002081 Cryptochrome/DNA photolyase class 1 VM_18790 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal VM_18790 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_18795 IPR000551 MerR-type HTH domain VM_18795 IPR009061 Putative DNA-binding domain superfamily VM_18800 IPR013560 Domain of unknown function DUF1722 VM_18810 IPR018016 Nucleoside phosphorylase, conserved site VM_18810 IPR000845 Nucleoside phosphorylase domain VM_18810 IPR035994 Nucleoside phosphorylase superfamily VM_18810 IPR004402 Purine nucleoside phosphorylase DeoD-type VM_18830 IPR011223 Uncharacterised conserved protein UCP028770 VM_18835 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VM_18850 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VM_18850 IPR001387 Cro/C1-type helix-turn-helix domain VM_18860 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal VM_18860 IPR012349 FMN-binding split barrel VM_18860 IPR009875 PilZ domain VM_18865 IPR004445 Sodium/glutamate symport carrier protein GltS VM_18880 IPR036249 Thioredoxin-like superfamily VM_18880 IPR003782 Copper chaperone SCO1/SenC VM_18890 IPR036458 Sodium:dicarboxylate symporter superfamily VM_18890 IPR001991 Sodium:dicarboxylate symporter VM_18890 IPR023025 Serine/threonine transporter SstT VM_18895 IPR003137 PA domain VM_18895 IPR041756 Peptidase M28, SGAP-like VM_18895 IPR007484 Peptidase M28 VM_18900 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VM_18900 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily VM_18925 IPR013540 Chitinase A N-terminal VM_18925 IPR036573 Carbohydrate-binding module superfamily 5/12 VM_18925 IPR003610 Carbohydrate-binding module family 5/12 VM_18925 IPR002126 Cadherin-like VM_18925 IPR001223 Glycoside hydrolase family 18, catalytic domain VM_18925 IPR029070 Chitinase insertion domain superfamily VM_18925 IPR001579 Glycoside hydrolase, chitinase active site VM_18925 IPR017853 Glycoside hydrolase superfamily VM_18925 IPR011583 Chitinase II VM_18925 IPR022409 PKD/Chitinase domain VM_18925 IPR013783 Immunoglobulin-like fold VM_18925 IPR014756 Immunoglobulin E-set VM_18930 IPR018635 Uncharacterised protein family UPF0319 VM_18935 IPR001898 Solute carrier family 13 VM_18935 IPR031312 Sodium/sulphate symporter, conserved site VM_18945 IPR011248 Serine/alanine racemase VM_18945 IPR011079 Alanine racemase, C-terminal VM_18945 IPR001608 Alanine racemase, N-terminal VM_18945 IPR002656 Acyltransferase 3 VM_18945 IPR029066 PLP-binding barrel VM_18945 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site VM_18945 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal VM_18945 IPR000821 Alanine racemase VM_18970 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein VM_18970 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset VM_18970 IPR006531 Gp5 N-terminal VM_18970 IPR037026 Vgr protein, OB-fold domain superfamily VM_18970 IPR032074 Actin cross-linking domain VM_18975 IPR008514 Type VI secretion system effector, Hcp VM_18975 IPR036624 Hcp1-like superfamily VM_18980 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta VM_18980 IPR017853 Glycoside hydrolase superfamily VM_18980 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB VM_18980 IPR037439 1,4-alpha-glucan-branching enzyme VM_18980 IPR013783 Immunoglobulin-like fold VM_18980 IPR014756 Immunoglobulin E-set VM_18980 IPR006047 Glycosyl hydrolase, family 13, catalytic domain VM_18980 IPR004193 Glycoside hydrolase, family 13, N-terminal VM_18980 IPR013780 Glycosyl hydrolase, all-beta VM_18985 IPR003385 Glycoside hydrolase, family 77 VM_18985 IPR017853 Glycoside hydrolase superfamily VM_18990 IPR011833 Glycogen/starch/alpha-glucan phosphorylase VM_18990 IPR000811 Glycosyl transferase, family 35 VM_18990 IPR035090 Phosphorylase pyridoxal-phosphate attachment site VM_18995 IPR000792 Transcription regulator LuxR, C-terminal VM_18995 IPR036388 Winged helix-like DNA-binding domain superfamily VM_18995 IPR041617 MalT-like TPR region VM_18995 IPR011990 Tetratricopeptide-like helical domain superfamily VM_18995 IPR016032 Signal transduction response regulator, C-terminal effector VM_18995 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_18995 IPR023768 Transcriptional regulator HTH-type, MalT VM_19000 IPR021230 Protein of unknown function DUF2810 VM_19005 IPR000727 Target SNARE coiled-coil homology domain VM_19005 IPR033480 Single Cache domain 2 VM_19005 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_19005 IPR003660 HAMP domain VM_19005 IPR004090 Chemotaxis methyl-accepting receptor VM_19010 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding VM_19010 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain VM_19010 IPR015815 3-hydroxyisobutyrate dehydrogenase-related VM_19010 IPR013328 6-phosphogluconate dehydrogenase, domain 2 VM_19010 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site VM_19010 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily VM_19010 IPR036291 NAD(P)-binding domain superfamily VM_19015 IPR017856 Integrase-like, N-terminal VM_19015 IPR026564 Transcriptional regulator TACO1-like, domain 3 VM_19015 IPR029072 YebC-like VM_19015 IPR002876 Transcriptional regulator TACO1-like VM_19045 IPR025669 AAA domain VM_19045 IPR041250 ParA helix turn helix domain VM_19045 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_19050 IPR004437 ParB/RepB/Spo0J partition protein VM_19050 IPR014884 ParB protein family, C-terminal VM_19050 IPR003115 ParB/Sulfiredoxin VM_19050 IPR036086 ParB/Sulfiredoxin superfamily VM_19055 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein VM_19055 IPR006059 Bacterial extracellular solute-binding protein VM_19060 IPR016181 Acyl-CoA N-acyltransferase VM_19060 IPR000182 GNAT domain VM_19060 IPR007807 Helicase domain VM_19060 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_19060 IPR032672 TmcA/NAT10/Kre33 VM_19060 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA VM_19070 IPR000873 AMP-dependent synthetase/ligase VM_19070 IPR020845 AMP-binding, conserved site VM_19070 IPR042099 AMP-dependent synthetase-like superfamily VM_19080 IPR020904 Short-chain dehydrogenase/reductase, conserved site VM_19080 IPR002347 Short-chain dehydrogenase/reductase SDR VM_19080 IPR036291 NAD(P)-binding domain superfamily VM_19090 IPR036388 Winged helix-like DNA-binding domain superfamily VM_19090 IPR001789 Signal transduction response regulator, receiver domain VM_19090 IPR001867 OmpR/PhoB-type DNA-binding domain VM_19090 IPR011006 CheY-like superfamily VM_19090 IPR039420 Transcriptional regulatory protein WalR-like VM_19095 IPR005467 Histidine kinase domain VM_19095 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VM_19095 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VM_19095 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_19095 IPR013727 Two-component sensor kinase, N-terminal VM_19095 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VM_19095 IPR003594 Histidine kinase/HSP90-like ATPase VM_19100 IPR040423 Phosphoethanolamine transferase VM_19100 IPR000917 Sulfatase, N-terminal VM_19100 IPR012549 Phosphoethanolamine transferase, N-terminal VM_19100 IPR017850 Alkaline-phosphatase-like, core domain superfamily VM_19105 IPR017871 ABC transporter, conserved site VM_19105 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_19105 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal VM_19105 IPR003439 ABC transporter-like VM_19105 IPR003593 AAA+ ATPase domain VM_19110 IPR035906 MetI-like superfamily VM_19110 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VM_19110 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VM_19115 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VM_19115 IPR035906 MetI-like superfamily VM_19115 IPR014156 Nickel ABC transporter, permease subunit NikB VM_19120 IPR039424 Solute-binding protein family 5 VM_19120 IPR030678 Peptide/nickel binding protein, MppA-type VM_19120 IPR023765 Solute-binding protein family 5, conserved site VM_19120 IPR000914 Solute-binding protein family 5 domain VM_19120 IPR011980 Nickel ABC transporter, substrate-binding protein NikA VM_19130 IPR036388 Winged helix-like DNA-binding domain superfamily VM_19130 IPR039420 Transcriptional regulatory protein WalR-like VM_19130 IPR001789 Signal transduction response regulator, receiver domain VM_19130 IPR016032 Signal transduction response regulator, C-terminal effector VM_19130 IPR011006 CheY-like superfamily VM_19130 IPR001867 OmpR/PhoB-type DNA-binding domain VM_19135 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_19135 IPR036641 HPT domain superfamily VM_19135 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VM_19135 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VM_19135 IPR004105 Histidine kinase CheA-like, homodimeric domain VM_19135 IPR036061 CheW-like domain superfamily VM_19135 IPR003594 Histidine kinase/HSP90-like ATPase VM_19135 IPR005467 Histidine kinase domain VM_19135 IPR002545 CheW-like domain VM_19135 IPR035891 CheY-binding domain of CheA VM_19135 IPR015162 CheY binding VM_19135 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily VM_19135 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain VM_19140 IPR039315 Chemotaxis protein CheW VM_19140 IPR036061 CheW-like domain superfamily VM_19140 IPR002545 CheW-like domain VM_19145 IPR002545 CheW-like domain VM_19145 IPR036061 CheW-like domain superfamily VM_19145 IPR039315 Chemotaxis protein CheW VM_19150 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_19150 IPR003660 HAMP domain VM_19150 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily VM_19150 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site VM_19150 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding VM_19150 IPR004090 Chemotaxis methyl-accepting receptor VM_19155 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily VM_19155 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal VM_19155 IPR000780 MCP methyltransferase, CheR-type VM_19155 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal VM_19155 IPR026024 Chemotaxis protein methyltransferase CheR VM_19155 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VM_19160 IPR038592 CheD-like superfamily VM_19160 IPR011324 Cytotoxic necrotizing factor-like, catalytic VM_19160 IPR005659 Chemoreceptor glutamine deamidase CheD VM_19165 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type VM_19165 IPR011006 CheY-like superfamily VM_19165 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase VM_19165 IPR035909 Methylesterase CheB, C-terminal VM_19165 IPR001789 Signal transduction response regulator, receiver domain VM_19170 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_19170 IPR029151 Periplasmic sensor-like domain superfamily VM_19170 IPR003660 HAMP domain VM_19170 IPR033479 Double Cache domain 1 VM_19170 IPR000727 Target SNARE coiled-coil homology domain VM_19180 IPR011006 CheY-like superfamily VM_19180 IPR000160 GGDEF domain VM_19180 IPR001789 Signal transduction response regulator, receiver domain VM_19180 IPR029787 Nucleotide cyclase VM_19190 IPR003439 ABC transporter-like VM_19190 IPR039395 Peptidase C39-like A VM_19190 IPR039421 Type I protein exporter VM_19190 IPR005074 Peptidase C39, bacteriocin processing VM_19190 IPR011527 ABC transporter type 1, transmembrane domain VM_19190 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_19190 IPR010132 ATPase, type I secretion system, HlyB VM_19190 IPR036640 ABC transporter type 1, transmembrane domain superfamily VM_19190 IPR003593 AAA+ ATPase domain VM_19190 IPR017871 ABC transporter, conserved site VM_19205 IPR006144 Secretion protein HlyD, conserved site VM_19205 IPR010129 Type I secretion membrane fusion protein, HlyD family VM_19210 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site VM_19210 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative VM_19210 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal VM_19210 IPR012349 FMN-binding split barrel VM_19210 IPR000659 Pyridoxamine 5'-phosphate oxidase VM_19215 IPR016032 Signal transduction response regulator, C-terminal effector VM_19215 IPR000792 Transcription regulator LuxR, C-terminal VM_19215 IPR036388 Winged helix-like DNA-binding domain superfamily VM_19215 IPR011006 CheY-like superfamily VM_19215 IPR001789 Signal transduction response regulator, receiver domain VM_19220 IPR005532 Sulfatase-modifying factor enzyme VM_19220 IPR016187 C-type lectin fold VM_19220 IPR042095 Sulfatase-modifying factor enzyme superfamily VM_19230 IPR018060 DNA binding HTH domain, AraC-type VM_19230 IPR009057 Homeobox-like domain superfamily VM_19230 IPR014710 RmlC-like jelly roll fold VM_19230 IPR018062 HTH domain AraC-type, conserved site VM_19230 IPR011051 RmlC-like cupin domain superfamily VM_19230 IPR020449 Transcription regulator HTH, AraC- type VM_19235 IPR016162 Aldehyde dehydrogenase, N-terminal VM_19235 IPR016161 Aldehyde/histidinol dehydrogenase VM_19235 IPR025703 Bifunctional protein PutA VM_19235 IPR010985 Ribbon-helix-helix VM_19235 IPR029510 Aldehyde dehydrogenase, glutamic acid active site VM_19235 IPR002872 Proline dehydrogenase domain VM_19235 IPR024082 Proline dehydrogenase PutA, domain II VM_19235 IPR024089 Proline dehydrogenase PutA, domain I/II VM_19235 IPR013321 Arc-type ribbon-helix-helix VM_19235 IPR024090 Proline dehydrogenase PutA, domain I VM_19235 IPR015590 Aldehyde dehydrogenase domain VM_19235 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 VM_19235 IPR016163 Aldehyde dehydrogenase, C-terminal VM_19235 IPR029041 FAD-linked oxidoreductase-like VM_19235 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain VM_19235 IPR016160 Aldehyde dehydrogenase, cysteine active site VM_19245 IPR038377 Sodium/glucose symporter superfamily VM_19245 IPR018212 Sodium/solute symporter, conserved site VM_19245 IPR001734 Sodium/solute symporter VM_19245 IPR011851 Sodium/proline symporter VM_19255 IPR029151 Periplasmic sensor-like domain superfamily VM_19255 IPR000727 Target SNARE coiled-coil homology domain VM_19255 IPR033479 Double Cache domain 1 VM_19255 IPR003660 HAMP domain VM_19255 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_19255 IPR004090 Chemotaxis methyl-accepting receptor VM_19260 IPR011991 ArsR-like helix-turn-helix domain VM_19260 IPR011008 Dimeric alpha-beta barrel VM_19260 IPR019888 Transcription regulator AsnC-type VM_19260 IPR000485 AsnC-type HTH domain VM_19260 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VM_19260 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VM_19260 IPR036388 Winged helix-like DNA-binding domain superfamily VM_19260 IPR036390 Winged helix DNA-binding domain superfamily VM_19265 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent VM_19265 IPR015590 Aldehyde dehydrogenase domain VM_19265 IPR016161 Aldehyde/histidinol dehydrogenase VM_19265 IPR016163 Aldehyde dehydrogenase, C-terminal VM_19265 IPR029510 Aldehyde dehydrogenase, glutamic acid active site VM_19265 IPR016162 Aldehyde dehydrogenase, N-terminal VM_19295 IPR016032 Signal transduction response regulator, C-terminal effector VM_19295 IPR036388 Winged helix-like DNA-binding domain superfamily VM_19295 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily VM_19295 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain VM_19295 IPR000792 Transcription regulator LuxR, C-terminal VM_19300 IPR027568 Ornithine decarboxylase SpeF VM_19300 IPR011193 Ornithine/lysine/arginine decarboxylase VM_19300 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal VM_19300 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VM_19300 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VM_19300 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily VM_19300 IPR000310 Orn/Lys/Arg decarboxylase, major domain VM_19300 IPR011006 CheY-like superfamily VM_19300 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal VM_19300 IPR027464 Ornithine decarboxylase, N-terminal VM_19300 IPR015424 Pyridoxal phosphate-dependent transferase VM_19305 IPR004754 Amino acid antiporter VM_19305 IPR002293 Amino acid/polyamine transporter I VM_19305 IPR027566 Putrescine transporter PotE VM_19310 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB VM_19310 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily VM_19320 IPR029028 Alpha/beta knot methyltransferases VM_19320 IPR007158 tRNA (pseudouridine(54)-N(1))-methyltransferase, TrmY VM_19320 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VM_19325 IPR002306 Tryptophan-tRNA ligase VM_19325 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_19325 IPR002305 Aminoacyl-tRNA synthetase, class Ic VM_19325 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site VM_19325 IPR024109 Tryptophan-tRNA ligase, bacterial-type VM_19330 IPR036390 Winged helix DNA-binding domain superfamily VM_19330 IPR036388 Winged helix-like DNA-binding domain superfamily VM_19330 IPR000847 Transcription regulator HTH, LysR VM_19330 IPR005119 LysR, substrate-binding VM_19335 IPR002347 Short-chain dehydrogenase/reductase SDR VM_19335 IPR020904 Short-chain dehydrogenase/reductase, conserved site VM_19335 IPR036291 NAD(P)-binding domain superfamily VM_19345 IPR036390 Winged helix DNA-binding domain superfamily VM_19345 IPR036388 Winged helix-like DNA-binding domain superfamily VM_19345 IPR000847 Transcription regulator HTH, LysR VM_19345 IPR005119 LysR, substrate-binding VM_19350 IPR036291 NAD(P)-binding domain superfamily VM_19350 IPR016040 NAD(P)-binding domain VM_19360 IPR009081 Phosphopantetheine binding ACP domain VM_19360 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site VM_19360 IPR015083 Polyketide synthase, docking domain VM_19360 IPR042104 Polyketide synthase, dehydratase domain superfamily VM_19360 IPR013968 Polyketide synthase, ketoreductase domain VM_19360 IPR020843 Polyketide synthase, enoylreductase domain VM_19360 IPR006162 Phosphopantetheine attachment site VM_19360 IPR020807 Polyketide synthase, dehydratase domain VM_19360 IPR020806 Polyketide synthase, phosphopantetheine-binding domain VM_19360 IPR018201 Beta-ketoacyl synthase, active site VM_19360 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VM_19360 IPR032821 Ketoacyl-synthetase, C-terminal extension VM_19360 IPR001227 Acyl transferase domain superfamily VM_19360 IPR036291 NAD(P)-binding domain superfamily VM_19360 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding VM_19360 IPR014030 Beta-ketoacyl synthase, N-terminal VM_19360 IPR036736 ACP-like superfamily VM_19360 IPR014031 Beta-ketoacyl synthase, C-terminal VM_19360 IPR014043 Acyl transferase VM_19360 IPR011032 GroES-like superfamily VM_19360 IPR016039 Thiolase-like VM_19360 IPR013154 Alcohol dehydrogenase, N-terminal VM_19360 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VM_19370 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic VM_19370 IPR029039 Flavoprotein-like superfamily VM_19370 IPR008254 Flavodoxin/nitric oxide synthase VM_19370 IPR005025 NADPH-dependent FMN reductase-like VM_19370 IPR010089 Flavoprotein WrbA-like VM_19375 IPR036390 Winged helix DNA-binding domain superfamily VM_19375 IPR005119 LysR, substrate-binding VM_19375 IPR000847 Transcription regulator HTH, LysR VM_19375 IPR036388 Winged helix-like DNA-binding domain superfamily VM_19390 IPR004779 Carboxylate/Amino Acid/Amine Transporter VM_19390 IPR000620 EamA domain VM_19420 IPR036291 NAD(P)-binding domain superfamily VM_19420 IPR000683 Oxidoreductase, N-terminal VM_19425 IPR007761 Mannitol repressor MtlR-like VM_19425 IPR038026 MtlR-like superfamily VM_19430 IPR023027 Mannitol dehydrogenase, conserved site VM_19430 IPR013131 Mannitol dehydrogenase, N-terminal VM_19430 IPR036291 NAD(P)-binding domain superfamily VM_19430 IPR023028 Mannitol-1-phosphate 5-dehydrogenase VM_19430 IPR013328 6-phosphogluconate dehydrogenase, domain 2 VM_19430 IPR013118 Mannitol dehydrogenase, C-terminal VM_19430 IPR000669 Mannitol dehydrogenase VM_19430 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily VM_19435 IPR003501 Phosphotransferase system, EIIB component, type 2/3 VM_19435 IPR002178 PTS EIIA type-2 domain VM_19435 IPR016152 Phosphotransferase/anion transporter VM_19435 IPR029503 Phosphotransferase system EIIB component, mannitol-specific VM_19435 IPR003352 Phosphotransferase system, EIIC VM_19435 IPR013014 Phosphotransferase system, EIIC component, type 2 VM_19435 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC VM_19435 IPR013011 Phosphotransferase system, EIIB component, type 2 VM_19435 IPR036095 PTS system IIB component-like superfamily VM_19440 IPR016047 Peptidase M23 VM_19440 IPR007340 Opacity-associated protein A VM_19440 IPR011055 Duplicated hybrid motif VM_19450 IPR016066 Alpha-D-phosphohexomutase, conserved site VM_19450 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily VM_19450 IPR005841 Alpha-D-phosphohexomutase superfamily VM_19450 IPR005843 Alpha-D-phosphohexomutase, C-terminal VM_19450 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III VM_19450 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II VM_19450 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III VM_19450 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I VM_19455 IPR035906 MetI-like superfamily VM_19455 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VM_19455 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain VM_19460 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VM_19460 IPR018313 Solute-binding protein family 3, conserved site VM_19460 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter VM_19460 IPR001320 Ionotropic glutamate receptor VM_19465 IPR035906 MetI-like superfamily VM_19465 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VM_19465 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain VM_19470 IPR017871 ABC transporter, conserved site VM_19470 IPR003439 ABC transporter-like VM_19470 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type VM_19470 IPR003593 AAA+ ATPase domain VM_19470 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_19475 IPR006218 DAHP synthetase I/KDSA VM_19475 IPR013785 Aldolase-type TIM barrel VM_19475 IPR006219 DHAP synthase, class 1 VM_19480 IPR002528 Multi antimicrobial extrusion protein VM_19485 IPR004090 Chemotaxis methyl-accepting receptor VM_19485 IPR003660 HAMP domain VM_19485 IPR035965 PAS domain superfamily VM_19485 IPR013655 PAS fold-3 VM_19485 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_19485 IPR001610 PAC motif VM_19485 IPR000014 PAS domain VM_19490 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily VM_19490 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like VM_19490 IPR000816 Peptidase C15, pyroglutamyl peptidase I VM_19490 IPR029762 Pyroglutamyl peptidase I, bacterial-type VM_19490 IPR033694 Pyroglutamyl peptidase I, Cys active site VM_19490 IPR033693 Pyroglutamyl peptidase I, Glu active site VM_19495 IPR036513 STAS domain superfamily VM_19495 IPR014792 RsbS co-antagonist protein RsbRA N-terminal domain VM_19495 IPR012292 Globin/Protoglobin VM_19495 IPR002645 STAS domain VM_19505 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VM_19505 IPR003594 Histidine kinase/HSP90-like ATPase VM_19515 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_19515 IPR003660 HAMP domain VM_19515 IPR003594 Histidine kinase/HSP90-like ATPase VM_19515 IPR011006 CheY-like superfamily VM_19515 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VM_19515 IPR005467 Histidine kinase domain VM_19515 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VM_19515 IPR036641 HPT domain superfamily VM_19515 IPR001789 Signal transduction response regulator, receiver domain VM_19515 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain VM_19515 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VM_19515 IPR019247 Histidine kinase BarA, N-terminal VM_19520 IPR011006 CheY-like superfamily VM_19520 IPR003607 HD/PDEase domain VM_19520 IPR037522 HD-GYP domain VM_19520 IPR001789 Signal transduction response regulator, receiver domain VM_19525 IPR000121 PEP-utilising enzyme, C-terminal VM_19525 IPR040442 Pyruvate kinase-like domain superfamily VM_19525 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily VM_19525 IPR013815 ATP-grasp fold, subdomain 1 VM_19525 IPR008279 PEP-utilising enzyme, mobile domain VM_19525 IPR006319 Phosphoenolpyruvate synthase VM_19525 IPR018274 PEP-utilising enzyme, active site VM_19525 IPR023151 PEP-utilising enzyme, conserved site VM_19525 IPR036637 Phosphohistidine domain superfamily VM_19525 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding VM_19530 IPR026530 Phosphoenolpyruvate synthase regulatory protein VM_19530 IPR005177 Bifunctional kinase-pyrophosphorylase VM_19540 IPR013785 Aldolase-type TIM barrel VM_19540 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent VM_19540 IPR000262 FMN-dependent dehydrogenase VM_19540 IPR037396 FMN hydroxy acid dehydrogenase domain VM_19540 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site VM_19540 IPR020920 L-lactate dehydrogenase, bacterial VM_19545 IPR003804 L-lactate permease VM_19550 IPR000847 Transcription regulator HTH, LysR VM_19550 IPR005119 LysR, substrate-binding VM_19550 IPR036390 Winged helix DNA-binding domain superfamily VM_19550 IPR036388 Winged helix-like DNA-binding domain superfamily VM_19555 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal VM_19555 IPR003593 AAA+ ATPase domain VM_19555 IPR003439 ABC transporter-like VM_19555 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_19555 IPR017871 ABC transporter, conserved site VM_19565 IPR008269 Peptidase S16, Lon proteolytic domain VM_19565 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VM_19565 IPR020568 Ribosomal protein S5 domain 2-type fold VM_19565 IPR027065 Lon protease VM_19565 IPR041699 Lon protease, AAA domain VM_19570 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_19570 IPR003660 HAMP domain VM_19570 IPR004090 Chemotaxis methyl-accepting receptor VM_19580 IPR011701 Major facilitator superfamily VM_19580 IPR020846 Major facilitator superfamily domain VM_19580 IPR036259 MFS transporter superfamily VM_19580 IPR005829 Sugar transporter, conserved site VM_19580 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG VM_19590 IPR014710 RmlC-like jelly roll fold VM_19590 IPR009664 Pyrimidine/purine nucleoside phosphorylase VM_19590 IPR011051 RmlC-like cupin domain superfamily VM_19595 IPR012093 Pirin VM_19595 IPR011051 RmlC-like cupin domain superfamily VM_19595 IPR014710 RmlC-like jelly roll fold VM_19595 IPR003829 Pirin, N-terminal domain VM_19595 IPR008778 Pirin, C-terminal domain VM_19605 IPR035919 EAL domain superfamily VM_19605 IPR003660 HAMP domain VM_19605 IPR029787 Nucleotide cyclase VM_19605 IPR000160 GGDEF domain VM_19605 IPR001633 EAL domain VM_19610 IPR000847 Transcription regulator HTH, LysR VM_19610 IPR036390 Winged helix DNA-binding domain superfamily VM_19610 IPR005119 LysR, substrate-binding VM_19610 IPR036388 Winged helix-like DNA-binding domain superfamily VM_19630 IPR029787 Nucleotide cyclase VM_19630 IPR001633 EAL domain VM_19630 IPR005330 MHYT domain VM_19630 IPR000160 GGDEF domain VM_19630 IPR035919 EAL domain superfamily VM_19645 IPR029787 Nucleotide cyclase VM_19645 IPR000160 GGDEF domain VM_19650 IPR036388 Winged helix-like DNA-binding domain superfamily VM_19650 IPR036390 Winged helix DNA-binding domain superfamily VM_19650 IPR000835 MarR-type HTH domain VM_19655 IPR011006 CheY-like superfamily VM_19655 IPR001789 Signal transduction response regulator, receiver domain VM_19655 IPR024181 Chemotaxis response regulator CheV VM_19655 IPR036061 CheW-like domain superfamily VM_19655 IPR002545 CheW-like domain VM_19660 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site VM_19660 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type VM_19675 IPR036390 Winged helix DNA-binding domain superfamily VM_19675 IPR005119 LysR, substrate-binding VM_19675 IPR036388 Winged helix-like DNA-binding domain superfamily VM_19675 IPR000847 Transcription regulator HTH, LysR VM_19685 IPR016032 Signal transduction response regulator, C-terminal effector VM_19685 IPR036388 Winged helix-like DNA-binding domain superfamily VM_19685 IPR000792 Transcription regulator LuxR, C-terminal VM_19690 IPR035439 UPF0145 domain superfamily VM_19690 IPR002765 Uncharacterised protein family UPF0145 VM_19695 IPR009971 Protein of unknown function DUF1496 VM_19700 IPR018392 LysM domain VM_19700 IPR023346 Lysozyme-like domain superfamily VM_19700 IPR008258 Transglycosylase SLT domain 1 VM_19700 IPR000189 Prokaryotic transglycosylase, active site VM_19700 IPR036779 LysM domain superfamily VM_19720 IPR019776 Flagellar basal body rod protein, conserved site VM_19720 IPR006300 Flagellar basal-body rod protein FlgB VM_19720 IPR001444 Flagellar basal body rod protein, N-terminal VM_19725 IPR006299 Flagellar basal-body rod protein FlgC VM_19725 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VM_19725 IPR019776 Flagellar basal body rod protein, conserved site VM_19725 IPR001444 Flagellar basal body rod protein, N-terminal VM_19730 IPR005648 Flagellar hook capping protein VM_19730 IPR025963 FlgD Tudor-like domain VM_19730 IPR025965 FlgD Ig-like domain VM_19735 IPR020013 Flagellar hook-basal body protein, FlgE/F/G VM_19735 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VM_19735 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like VM_19735 IPR019776 Flagellar basal body rod protein, conserved site VM_19735 IPR037058 Flagellar hook protein FlgE superfamily VM_19735 IPR001444 Flagellar basal body rod protein, N-terminal VM_19735 IPR011491 Flagellar hook protein FlgE VM_19740 IPR001444 Flagellar basal body rod protein, N-terminal VM_19740 IPR020013 Flagellar hook-basal body protein, FlgE/F/G VM_19740 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like VM_19740 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VM_19740 IPR019776 Flagellar basal body rod protein, conserved site VM_19745 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like VM_19745 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VM_19745 IPR012834 Flagellar basal-body rod FlgG VM_19745 IPR001444 Flagellar basal body rod protein, N-terminal VM_19745 IPR019776 Flagellar basal body rod protein, conserved site VM_19745 IPR020013 Flagellar hook-basal body protein, FlgE/F/G VM_19750 IPR000527 Flagellar L-ring protein VM_19755 IPR001782 Flagellar P-ring protein VM_19760 IPR013377 Peptidoglycan hydrolase FlgJ VM_19760 IPR023346 Lysozyme-like domain superfamily VM_19760 IPR019301 Flagellar protein FlgJ, N-terminal VM_19760 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain VM_19765 IPR002371 Flagellar hook-associated protein 1 VM_19765 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VM_19765 IPR019776 Flagellar basal body rod protein, conserved site VM_19765 IPR001444 Flagellar basal body rod protein, N-terminal VM_19785 IPR025713 Motility protein B, N-terminal domain VM_19785 IPR006665 OmpA-like domain VM_19785 IPR036737 OmpA-like domain superfamily VM_19790 IPR002898 MotA/TolQ/ExbB proton channel VM_19790 IPR000540 Flagellar motor protein MotA, conserved site VM_19790 IPR022522 Flagellar motor stator, MotA VM_19795 IPR013325 RNA polymerase sigma factor, region 2 VM_19795 IPR013324 RNA polymerase sigma factor, region 3/4-like VM_19795 IPR012845 RNA polymerase sigma factor, FliA/WhiG VM_19795 IPR000943 RNA polymerase sigma-70 VM_19795 IPR007627 RNA polymerase sigma-70 region 2 VM_19795 IPR007630 RNA polymerase sigma-70 region 4 VM_19795 IPR014284 RNA polymerase sigma-70 like domain VM_19800 IPR005503 Flagellar basal body-associated protein FliL VM_19820 IPR010810 Flagellin hook, IN motif VM_19820 IPR040026 Flagellar hook-associated protein 2 VM_19820 IPR010809 Flagellar hook-associated protein 2, C-terminal VM_19820 IPR003481 Flagellar hook-associated protein 2, N-terminal VM_19830 IPR001029 Flagellin, D0/D1 domain VM_19830 IPR042187 Flagellin, C-terminal domain, subdomain 2 VM_19830 IPR001492 Flagellin VM_19835 IPR001712 Type III secretion system FHIPEP VM_19835 IPR006301 Flagellar biosynthesis protein FlhA VM_19835 IPR025505 FHIPEP conserved site VM_19835 IPR042193 FHIPEP, domain 3 VM_19835 IPR042194 FHIPEP, domain 1 VM_19835 IPR042196 FHIPEP, domain 4 VM_19840 IPR006136 Flagellar biosynthetic protein FlhB VM_19840 IPR006135 Type III secretion system substrate exporter VM_19840 IPR029025 Type III secretion system substrate exporter, C-terminal VM_19845 IPR006303 Flagellar biosynthesis protein FliR VM_19845 IPR002010 Type III secretion system inner membrane R protein VM_19850 IPR002191 Bacterial export protein family 3 VM_19850 IPR006305 Flagellar biosynthesis protein FliQ VM_19855 IPR005838 Type III secretion system inner membrane P protein VM_19855 IPR005837 Flagellar transport protein FliP VM_19860 IPR012826 Flagellar motor switch FliN VM_19860 IPR036429 SpoA-like superfamily VM_19860 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb VM_19860 IPR001543 Surface presentation of antigen (SpoA) VM_19870 IPR006690 Outer membrane protein, OmpA-like, conserved site VM_19870 IPR006665 OmpA-like domain VM_19870 IPR006664 Outer membrane protein, bacterial VM_19870 IPR036737 OmpA-like domain superfamily VM_19875 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VM_19875 IPR025944 Sigma-54 interaction domain, conserved site VM_19875 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VM_19875 IPR002197 DNA binding HTH domain, Fis-type VM_19875 IPR011006 CheY-like superfamily VM_19875 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_19875 IPR003593 AAA+ ATPase domain VM_19875 IPR001789 Signal transduction response regulator, receiver domain VM_19875 IPR002078 RNA polymerase sigma factor 54 interaction domain VM_19875 IPR009057 Homeobox-like domain superfamily VM_19880 IPR001624 Flagellar hook-basal body complex protein FliE VM_19885 IPR013556 Flagellar M-ring C-terminal VM_19885 IPR006182 Secretory protein YscJ/FliF VM_19885 IPR000067 Flagellar M-ring protein FliF VM_19890 IPR000090 Flagellar motor switch protein FliG VM_19890 IPR023087 Flagellar motor switch protein FliG, C-terminal VM_19890 IPR028263 Flagellar motor switch protein FliG, N-terminal domain VM_19890 IPR011002 Flagellar motor switch protein FliG, alpha-helical VM_19890 IPR032779 Flagellar motor switch protein FliG, middle domain VM_19900 IPR003593 AAA+ ATPase domain VM_19900 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_19900 IPR040627 T3SS EscN ATPase, C-terminal VM_19900 IPR032463 ATPase, type III secretion system, FliI VM_19900 IPR020005 Flagellar export ATPase FliI, clade 1 VM_19900 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain VM_19900 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site VM_19900 IPR005714 ATPase, type III secretion system, FliI/YscN VM_19910 IPR038965 Transposase InsF-like VM_19910 IPR009057 Homeobox-like domain superfamily VM_19915 IPR000771 Fructose-bisphosphate aldolase, class-II VM_19915 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY VM_19915 IPR023955 D-tagatose-bisphosphate aldolase, class II, subunit GatY VM_19915 IPR013785 Aldolase-type TIM barrel VM_19920 IPR002178 PTS EIIA type-2 domain VM_19920 IPR003353 Phosphotransferase system, fructose-specific IIB subunit VM_19920 IPR036095 PTS system IIB component-like superfamily VM_19920 IPR013011 Phosphotransferase system, EIIB component, type 2 VM_19920 IPR003501 Phosphotransferase system, EIIB component, type 2/3 VM_19920 IPR003352 Phosphotransferase system, EIIC VM_19920 IPR013014 Phosphotransferase system, EIIC component, type 2 VM_19920 IPR004715 Phosphotransferase system, IIA component fructose subfamily VM_19920 IPR016152 Phosphotransferase/anion transporter VM_19920 IPR006327 Phosphotransferase system, fructose IIC component VM_19925 IPR006327 Phosphotransferase system, fructose IIC component VM_19925 IPR036095 PTS system IIB component-like superfamily VM_19925 IPR016152 Phosphotransferase/anion transporter VM_19925 IPR013011 Phosphotransferase system, EIIB component, type 2 VM_19925 IPR003501 Phosphotransferase system, EIIB component, type 2/3 VM_19925 IPR013014 Phosphotransferase system, EIIC component, type 2 VM_19925 IPR004715 Phosphotransferase system, IIA component fructose subfamily VM_19925 IPR003353 Phosphotransferase system, fructose-specific IIB subunit VM_19925 IPR002178 PTS EIIA type-2 domain VM_19935 IPR001034 DeoR-type HTH domain VM_19935 IPR037171 NagB/RpiA transferase-like VM_19935 IPR036390 Winged helix DNA-binding domain superfamily VM_19935 IPR036388 Winged helix-like DNA-binding domain superfamily VM_19935 IPR018356 Transcription regulator, HTH DeoR-type, conserved site VM_19935 IPR014036 DeoR C-terminal sensor domain VM_19950 IPR016181 Acyl-CoA N-acyltransferase VM_19950 IPR000182 GNAT domain VM_19955 IPR013611 Transport-associated OB, type 2 VM_19955 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_19955 IPR003439 ABC transporter-like VM_19955 IPR017871 ABC transporter, conserved site VM_19955 IPR015855 ABC transporter, maltose/maltodextrin import, MalK VM_19955 IPR008995 Molybdate/tungstate binding, C-terminal VM_19955 IPR003593 AAA+ ATPase domain VM_19960 IPR006059 Bacterial extracellular solute-binding protein VM_19960 IPR006061 Solute-binding family 1, conserved site VM_19960 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein VM_19965 IPR035277 MalF, N-terminal VM_19965 IPR029345 Maltose transport system permease protein MalF, P2 domain VM_19965 IPR035906 MetI-like superfamily VM_19965 IPR030156 Maltose/maltodextrin transport system permease protein MalF-like VM_19965 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VM_19970 IPR035906 MetI-like superfamily VM_19970 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VM_19985 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type VM_19985 IPR006179 5'-Nucleotidase/apyrase VM_19985 IPR036907 5'-Nucleotidase, C-terminal domain superfamily VM_19985 IPR006146 5'-Nucleotidase, conserved site VM_19985 IPR029052 Metallo-dependent phosphatase-like VM_19985 IPR008334 5'-Nucleotidase, C-terminal VM_19995 IPR037171 NagB/RpiA transferase-like VM_19995 IPR036388 Winged helix-like DNA-binding domain superfamily VM_19995 IPR018356 Transcription regulator, HTH DeoR-type, conserved site VM_19995 IPR036390 Winged helix DNA-binding domain superfamily VM_19995 IPR001034 DeoR-type HTH domain VM_19995 IPR014036 DeoR C-terminal sensor domain VM_20000 IPR000160 GGDEF domain VM_20000 IPR029787 Nucleotide cyclase VM_20000 IPR033416 Periplasmic sensor domain CHASE7 VM_20025 IPR012340 Nucleic acid-binding, OB-fold VM_20025 IPR011129 Cold shock domain VM_20025 IPR002059 Cold-shock protein, DNA-binding VM_20025 IPR012156 Cold shock, CspA VM_20035 IPR003593 AAA+ ATPase domain VM_20035 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_20035 IPR017871 ABC transporter, conserved site VM_20035 IPR003439 ABC transporter-like VM_20035 IPR032781 ABC-transporter extension domain VM_20040 IPR008526 Inner membrane protein YedI VM_20045 IPR030390 RNA methyltransferase TrmA, active site VM_20045 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VM_20045 IPR010280 (Uracil-5)-methyltransferase family VM_20045 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC VM_20055 IPR008523 Protein of unknown function DUF805 VM_20065 IPR032466 Metal-dependent hydrolase VM_20065 IPR002195 Dihydroorotase, conserved site VM_20065 IPR004721 Dihydroorotase homodimeric type VM_20065 IPR006680 Amidohydrolase-related VM_20070 IPR005302 Molybdenum cofactor sulfurase, C-terminal VM_20070 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain VM_20070 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain VM_20070 IPR005303 MOSC, N-terminal beta barrel VM_20070 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site VM_20070 IPR005302 Molybdenum cofactor sulfurase, C-terminal VM_20070 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site VM_20070 IPR012675 Beta-grasp domain superfamily VM_20070 IPR036010 2Fe-2S ferredoxin-like superfamily VM_20070 IPR036010 2Fe-2S ferredoxin-like superfamily VM_20070 IPR011037 Pyruvate kinase-like, insert domain superfamily VM_20070 IPR012675 Beta-grasp domain superfamily VM_20070 IPR005303 MOSC, N-terminal beta barrel VM_20070 IPR011037 Pyruvate kinase-like, insert domain superfamily VM_20075 IPR038215 Transposase, Tn5-like, N-terminal domain superfamily VM_20075 IPR012337 Ribonuclease H-like superfamily VM_20075 IPR014737 Transposase, Tn5-like, C-terminal VM_20075 IPR014736 Transposase, Tn5-like, core VM_20075 IPR014735 Transposase, Tn5-like, N-terminal VM_20075 IPR002559 Transposase, IS4-like VM_20075 IPR003201 Transposase Tn5, dimerisation VM_20080 IPR004090 Chemotaxis methyl-accepting receptor VM_20080 IPR029151 Periplasmic sensor-like domain superfamily VM_20080 IPR003660 HAMP domain VM_20080 IPR000727 Target SNARE coiled-coil homology domain VM_20080 IPR033479 Double Cache domain 1 VM_20080 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_20110 IPR003593 AAA+ ATPase domain VM_20110 IPR003439 ABC transporter-like VM_20110 IPR015863 ABC transporter, hemin import, HmuV VM_20110 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_20115 IPR037294 ABC transporter, BtuC-like VM_20115 IPR000522 ABC transporter, permease protein, BtuC-like VM_20120 IPR002491 ABC transporter periplasmic binding domain VM_20125 IPR003400 Biopolymer transport protein ExbD/TolR VM_20130 IPR002898 MotA/TolQ/ExbB proton channel VM_20135 IPR003538 Gram-negative bacterial TonB protein VM_20135 IPR037682 TonB, C-terminal VM_20135 IPR006260 TonB/TolA, C-terminal VM_20140 IPR007197 Radical SAM VM_20140 IPR026332 Anaerobilin synthase HutW VM_20140 IPR034505 Anaerobic coproporphyrinogen-III oxidase VM_20140 IPR006638 Elp3/MiaB/NifB VM_20140 IPR023404 Radical SAM, alpha/beta horseshoe VM_20145 IPR010413 Intracellular heme transport protein HutX-like VM_20150 IPR014419 Heme utilization protein HutZ VM_20150 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative VM_20150 IPR012349 FMN-binding split barrel VM_20155 IPR003660 HAMP domain VM_20155 IPR004090 Chemotaxis methyl-accepting receptor VM_20155 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_20160 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase VM_20160 IPR009056 Cytochrome c-like domain VM_20160 IPR036909 Cytochrome c-like domain superfamily VM_20160 IPR004852 Di-haem cytochrome c peroxidase VM_20165 IPR041522 CdaR, GGDEF-like domain VM_20165 IPR008599 Putative sugar diacid recognition VM_20165 IPR025736 PucR C-terminal helix-turn-helix domain VM_20165 IPR042070 PucR C-terminal helix-turn-helix domain superfamily VM_20170 IPR003474 Gluconate transporter VM_20175 IPR036129 Glycerate kinase superfamily VM_20175 IPR018197 Glycerate kinase, restriction-enzyme-like fold VM_20175 IPR004381 Glycerate kinase VM_20175 IPR018193 Glycerate kinase, flavodoxin-like fold VM_20195 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily VM_20195 IPR013328 6-phosphogluconate dehydrogenase, domain 2 VM_20195 IPR006114 6-phosphogluconate dehydrogenase, C-terminal VM_20195 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating VM_20195 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding VM_20195 IPR006184 6-phosphogluconate-binding site VM_20195 IPR036291 NAD(P)-binding domain superfamily VM_20195 IPR006183 6-phosphogluconate dehydrogenase VM_20200 IPR039104 6-Phosphogluconolactonase VM_20200 IPR005900 6-phosphogluconolactonase, DevB-type VM_20200 IPR037171 NagB/RpiA transferase-like VM_20200 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase VM_20205 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal VM_20205 IPR001282 Glucose-6-phosphate dehydrogenase VM_20205 IPR036291 NAD(P)-binding domain superfamily VM_20205 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding VM_20205 IPR019796 Glucose-6-phosphate dehydrogenase, active site VM_20210 IPR023710 Probable phosphatase YcdX VM_20210 IPR003141 Polymerase/histidinol phosphatase, N-terminal VM_20210 IPR016195 Polymerase/histidinol phosphatase-like VM_20220 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VM_20220 IPR003660 HAMP domain VM_20220 IPR001789 Signal transduction response regulator, receiver domain VM_20220 IPR005467 Histidine kinase domain VM_20220 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VM_20220 IPR036641 HPT domain superfamily VM_20220 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_20220 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain VM_20220 IPR019247 Histidine kinase BarA, N-terminal VM_20220 IPR003594 Histidine kinase/HSP90-like ATPase VM_20220 IPR011006 CheY-like superfamily VM_20220 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VM_20225 IPR029787 Nucleotide cyclase VM_20225 IPR001633 EAL domain VM_20225 IPR016132 Phytochrome chromophore attachment domain VM_20225 IPR003018 GAF domain VM_20225 IPR029016 GAF-like domain superfamily VM_20225 IPR000160 GGDEF domain VM_20225 IPR001294 Phytochrome VM_20225 IPR035919 EAL domain superfamily VM_20225 IPR013515 Phytochrome, central region VM_20240 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VM_20240 IPR037478 YwkD-like domain VM_20240 IPR037523 Vicinal oxygen chelate (VOC) domain VM_20240 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VM_20245 IPR036388 Winged helix-like DNA-binding domain superfamily VM_20245 IPR036390 Winged helix DNA-binding domain superfamily VM_20245 IPR005119 LysR, substrate-binding VM_20245 IPR000847 Transcription regulator HTH, LysR VM_20250 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme VM_20250 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase VM_20250 IPR015424 Pyridoxal phosphate-dependent transferase VM_20250 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VM_20250 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VM_20255 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VM_20255 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VM_20255 IPR015424 Pyridoxal phosphate-dependent transferase VM_20255 IPR004839 Aminotransferase, class I/classII VM_20255 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site VM_20255 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase VM_20260 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site VM_20260 IPR011032 GroES-like superfamily VM_20260 IPR020843 Polyketide synthase, enoylreductase domain VM_20260 IPR013154 Alcohol dehydrogenase, N-terminal VM_20260 IPR013149 Alcohol dehydrogenase, C-terminal VM_20260 IPR036291 NAD(P)-binding domain superfamily VM_20260 IPR004627 L-threonine 3-dehydrogenase VM_20270 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal VM_20270 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal VM_20270 IPR006276 Cobalamin-independent methionine synthase VM_20270 IPR038071 UROD/MetE-like superfamily VM_20280 IPR009057 Homeobox-like domain superfamily VM_20280 IPR038965 Transposase InsF-like VM_20290 IPR036390 Winged helix DNA-binding domain superfamily VM_20290 IPR036388 Winged helix-like DNA-binding domain superfamily VM_20290 IPR011991 ArsR-like helix-turn-helix domain VM_20290 IPR001845 HTH ArsR-type DNA-binding domain VM_20300 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A VM_20300 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal VM_20300 IPR012338 Beta-lactamase/transpeptidase-like VM_20310 IPR005618 Outer membrane protein, OmpW VM_20310 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VM_20330 IPR017853 Glycoside hydrolase superfamily VM_20330 IPR014635 Alpha-amylase, MalS type VM_20330 IPR006047 Glycosyl hydrolase, family 13, catalytic domain VM_20350 IPR003593 AAA+ ATPase domain VM_20350 IPR017871 ABC transporter, conserved site VM_20350 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_20350 IPR003439 ABC transporter-like VM_20350 IPR003838 ABC transporter permease protein domain VM_20350 IPR017911 ABC transporter, macrolide export, ATP-binding domain VM_20350 IPR025857 MacB-like periplasmic core domain VM_20365 IPR010559 Signal transduction histidine kinase, internal region VM_20365 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VM_20365 IPR003594 Histidine kinase/HSP90-like ATPase VM_20365 IPR029016 GAF-like domain superfamily VM_20365 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region VM_20370 IPR011006 CheY-like superfamily VM_20370 IPR007492 LytTR DNA-binding domain VM_20370 IPR001789 Signal transduction response regulator, receiver domain VM_20380 IPR029787 Nucleotide cyclase VM_20380 IPR000160 GGDEF domain VM_20385 IPR002293 Amino acid/polyamine transporter I VM_20400 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain VM_20400 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site VM_20400 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family VM_20400 IPR036291 NAD(P)-binding domain superfamily VM_20400 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain VM_20400 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I VM_20410 IPR002125 Cytidine and deoxycytidylate deaminase domain VM_20410 IPR015517 Deoxycytidylate deaminase-related VM_20410 IPR035105 Deoxycytidylate deaminase domain VM_20410 IPR016473 Deoxycytidylate deaminase VM_20410 IPR016192 APOBEC/CMP deaminase, zinc-binding VM_20410 IPR016193 Cytidine deaminase-like VM_20420 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA VM_20420 IPR006143 RND efflux pump, membrane fusion protein VM_20420 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VM_20430 IPR003718 OsmC/Ohr family VM_20430 IPR036102 OsmC/Ohr superfamily VM_20430 IPR015946 K homology domain-like, alpha/beta VM_20435 IPR000644 CBS domain VM_20435 IPR005170 Transporter-associated domain VM_20435 IPR016169 FAD-binding, type PCMH, subdomain 2 VM_20435 IPR036318 FAD-binding, type PCMH-like superfamily VM_20435 IPR002550 CNNM, transmembrane domain VM_20440 IPR011004 Trimeric LpxA-like superfamily VM_20440 IPR001451 Hexapeptide repeat VM_20440 IPR018357 Hexapeptide transferase, conserved site VM_20440 IPR013710 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, N-terminal VM_20440 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH VM_20445 IPR000620 EamA domain VM_20450 IPR010233 Ubiquinone biosynthesis O-methyltransferase VM_20450 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VM_20465 IPR042099 AMP-dependent synthetase-like superfamily VM_20465 IPR000873 AMP-dependent synthetase/ligase VM_20465 IPR020845 AMP-binding, conserved site VM_20465 IPR025110 AMP-binding enzyme, C-terminal domain VM_20465 IPR005914 Acetoacetyl-CoA synthase VM_20470 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily VM_20470 IPR001273 Aromatic amino acid hydroxylase VM_20470 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site VM_20470 IPR036951 Aromatic amino acid hydroxylase superfamily VM_20470 IPR019774 Aromatic amino acid hydroxylase, C-terminal VM_20470 IPR005960 Phenylalanine-4-hydroxylase, monomeric form VM_20475 IPR001533 Pterin 4 alpha carbinolamine dehydratase VM_20475 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily VM_20485 IPR002528 Multi antimicrobial extrusion protein VM_20495 IPR017853 Glycoside hydrolase superfamily VM_20495 IPR018060 DNA binding HTH domain, AraC-type VM_20495 IPR037923 Transcription regulator HTH-like VM_20495 IPR009057 Homeobox-like domain superfamily VM_20495 IPR020449 Transcription regulator HTH, AraC- type VM_20500 IPR012772 L-2,4-diaminobutyric acid acetyltransferase VM_20500 IPR016181 Acyl-CoA N-acyltransferase VM_20500 IPR000182 GNAT domain VM_20505 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VM_20505 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VM_20505 IPR005814 Aminotransferase class-III VM_20505 IPR004637 2,4-diaminobutyrate 4-transaminase VM_20505 IPR012773 Ectoine biosynthetic protein VM_20505 IPR015424 Pyridoxal phosphate-dependent transferase VM_20510 IPR014710 RmlC-like jelly roll fold VM_20510 IPR011051 RmlC-like cupin domain superfamily VM_20510 IPR010462 Ectoine synthase VM_20515 IPR027795 CASTOR, ACT domain VM_20515 IPR036393 Acetylglutamate kinase-like superfamily VM_20515 IPR001048 Aspartate/glutamate/uridylate kinase VM_20520 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily VM_20520 IPR038076 MgtE, N-terminal domain superfamily VM_20520 IPR006668 Magnesium transporter, MgtE intracellular domain VM_20520 IPR038048 Magnesium transporter MgtE, transmembrane domain VM_20520 IPR006669 Magnesium transporter MgtE VM_20520 IPR000644 CBS domain VM_20520 IPR006667 SLC41 divalent cation transporters, integral membrane domain VM_20545 IPR002985 Arginine decarboxylase VM_20545 IPR040634 Arginine decarboxylase, helical bundle domain VM_20545 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal VM_20545 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal VM_20545 IPR000183 Ornithine/DAP/Arg decarboxylase VM_20545 IPR029066 PLP-binding barrel VM_20545 IPR041128 Arginine decarboxylase, C-terminal helical VM_20550 IPR020855 Ureohydrolase, manganese-binding site VM_20550 IPR006035 Ureohydrolase VM_20550 IPR023694 Agmatinase VM_20550 IPR005925 Agmatinase-related VM_20550 IPR023696 Ureohydrolase domain superfamily VM_20565 IPR021120 KduI/IolB isomerase VM_20565 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal VM_20565 IPR014710 RmlC-like jelly roll fold VM_20565 IPR011051 RmlC-like cupin domain superfamily VM_20565 IPR007045 5-keto 4-deoxyuronate isomerase VM_20570 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site VM_20570 IPR011611 Carbohydrate kinase PfkB VM_20570 IPR029056 Ribokinase-like VM_20575 IPR013785 Aldolase-type TIM barrel VM_20575 IPR000887 KDPG/KHG aldolase VM_20575 IPR031338 KDPG/KHG aldolase, active site 2 VM_20575 IPR031337 KDPG/KHG aldolase, active site 1 VM_20580 IPR036265 HIT-like superfamily VM_20580 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal VM_20580 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal VM_20580 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site VM_20580 IPR001937 Galactose-1-phosphate uridyl transferase, class I VM_20585 IPR036291 NAD(P)-binding domain superfamily VM_20585 IPR020904 Short-chain dehydrogenase/reductase, conserved site VM_20585 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase VM_20585 IPR002347 Short-chain dehydrogenase/reductase SDR VM_20590 IPR010905 Glycosyl hydrolase, family 88 VM_20590 IPR008928 Six-hairpin glycosidase superfamily VM_20590 IPR012341 Six-hairpin glycosidase-like superfamily VM_20595 IPR035363 Lacto-N-biose phosphorylase, central domain VM_20595 IPR035356 Lacto-N-biose phosphorylase, C-terminal domain VM_20595 IPR012711 Lacto-N-biose phosphorylase/D-galactosyl-beta-1->4-L-rhamnose phosphorylase VM_20595 IPR035080 Lacto-N-biose phosphorylase-like, N-terminal TIM barrel domain VM_20595 IPR013780 Glycosyl hydrolase, all-beta VM_20595 IPR029062 Class I glutamine amidotransferase-like VM_20595 IPR013783 Immunoglobulin-like fold VM_20600 IPR036515 Transposase IS200-like superfamily VM_20600 IPR002686 Transposase IS200-like VM_20610 IPR000160 GGDEF domain VM_20610 IPR035919 EAL domain superfamily VM_20610 IPR001633 EAL domain VM_20610 IPR005330 MHYT domain VM_20610 IPR029787 Nucleotide cyclase VM_20615 IPR032158 Domain of unknown function DUF4994 VM_20615 IPR017850 Alkaline-phosphatase-like, core domain superfamily VM_20615 IPR024607 Sulfatase, conserved site VM_20615 IPR000917 Sulfatase, N-terminal VM_20620 IPR000917 Sulfatase, N-terminal VM_20620 IPR017850 Alkaline-phosphatase-like, core domain superfamily VM_20625 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme VM_20625 IPR007197 Radical SAM VM_20625 IPR013785 Aldolase-type TIM barrel VM_20625 IPR023885 4Fe4S-binding SPASM domain VM_20635 IPR023765 Solute-binding protein family 5, conserved site VM_20635 IPR030678 Peptide/nickel binding protein, MppA-type VM_20635 IPR039424 Solute-binding protein family 5 VM_20635 IPR000914 Solute-binding protein family 5 domain VM_20640 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VM_20640 IPR035906 MetI-like superfamily VM_20645 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VM_20645 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VM_20645 IPR035906 MetI-like superfamily VM_20650 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal VM_20650 IPR003593 AAA+ ATPase domain VM_20650 IPR003439 ABC transporter-like VM_20650 IPR017871 ABC transporter, conserved site VM_20650 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_20655 IPR000014 PAS domain VM_20655 IPR013655 PAS fold-3 VM_20655 IPR035965 PAS domain superfamily VM_20655 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_20655 IPR004090 Chemotaxis methyl-accepting receptor VM_20655 IPR000700 PAS-associated, C-terminal VM_20655 IPR001610 PAC motif VM_20660 IPR029016 GAF-like domain superfamily VM_20660 IPR036390 Winged helix DNA-binding domain superfamily VM_20660 IPR036388 Winged helix-like DNA-binding domain superfamily VM_20660 IPR005471 Transcription regulator IclR, N-terminal VM_20660 IPR014757 Transcription regulator IclR, C-terminal VM_20660 IPR011991 ArsR-like helix-turn-helix domain VM_20665 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal VM_20665 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily VM_20665 IPR015956 Penicillin-binding protein, C-terminal domain superfamily VM_20665 IPR012338 Beta-lactamase/transpeptidase-like VM_20665 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A VM_20665 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal VM_20680 IPR001148 Alpha carbonic anhydrase domain VM_20680 IPR036398 Alpha carbonic anhydrase domain superfamily VM_20680 IPR023561 Carbonic anhydrase, alpha-class VM_20680 IPR018338 Carbonic anhydrase, alpha-class, conserved site VM_20680 IPR041891 Carbonic anhydrase, prokaryotic-like VM_20685 IPR040794 Carbohydrate esterase 2, N-terminal VM_20685 IPR008979 Galactose-binding-like domain superfamily VM_20685 IPR013830 SGNH hydrolase-type esterase domain VM_20685 IPR036514 SGNH hydrolase superfamily VM_20685 IPR037461 CtCE2-like domain VM_20690 IPR015424 Pyridoxal phosphate-dependent transferase VM_20690 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VM_20690 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VM_20690 IPR003437 Glycine dehydrogenase (decarboxylating) VM_20690 IPR020581 Glycine cleavage system P protein VM_20695 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site VM_20695 IPR033753 Glycine cleavage system H-protein/Simiate VM_20695 IPR017453 Glycine cleavage system H-protein, subgroup VM_20695 IPR011053 Single hybrid motif VM_20695 IPR000089 Biotin/lipoyl attachment VM_20695 IPR002930 Glycine cleavage system H-protein VM_20700 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site VM_20700 IPR039429 Serine hydroxymethyltransferase-like domain VM_20700 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VM_20700 IPR001085 Serine hydroxymethyltransferase VM_20700 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VM_20700 IPR015424 Pyridoxal phosphate-dependent transferase VM_20710 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 VM_20710 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal VM_20710 IPR006223 Glycine cleavage system T protein VM_20710 IPR006222 Aminomethyltransferase, folate-binding domain VM_20710 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain VM_20710 IPR028896 Aminomethyltransferase-like VM_20710 IPR022903 Glycine cleavage system T protein, bacteria VM_20715 IPR002320 Threonine-tRNA ligase, class IIa VM_20715 IPR012947 Threonyl/alanyl tRNA synthetase, SAD VM_20715 IPR033728 Threonine-tRNA ligase catalytic core domain VM_20715 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily VM_20715 IPR012676 TGS-like VM_20715 IPR004095 TGS VM_20715 IPR012675 Beta-grasp domain superfamily VM_20715 IPR036621 Anticodon-binding domain superfamily VM_20715 IPR004154 Anticodon-binding VM_20715 IPR006195 Aminoacyl-tRNA synthetase, class II VM_20715 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) VM_20720 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily VM_20720 IPR019813 Translation initiation factor 3, conserved site VM_20720 IPR001288 Translation initiation factor 3 VM_20720 IPR019814 Translation initiation factor 3, N-terminal VM_20720 IPR019815 Translation initiation factor 3, C-terminal VM_20720 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily VM_20725 IPR018265 Ribosomal protein L35, conserved site VM_20725 IPR037229 Ribosomal protein L35 superfamily VM_20725 IPR001706 Ribosomal protein L35, non-mitochondrial VM_20725 IPR021137 Ribosomal protein L35 VM_20730 IPR035566 Ribosomal protein L20, C-terminal VM_20730 IPR005813 Ribosomal protein L20 VM_20735 IPR004107 Integrase, SAM-like, N-terminal VM_20735 IPR010998 Integrase/recombinase, N-terminal VM_20735 IPR011946 Integrase, integron-type VM_20735 IPR002104 Integrase, catalytic domain VM_20735 IPR011010 DNA breaking-rejoining enzyme, catalytic core VM_20735 IPR013762 Integrase-like, catalytic domain superfamily