VM_00005 IPR001957 Chromosomal replication control, initiator DnaA VM_00005 IPR003593 AAA+ ATPase domain VM_00005 IPR010921 Trp repressor/replication initiator VM_00005 IPR013159 Chromosomal replication initiator, DnaA C-terminal VM_00005 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) VM_00005 IPR018312 Chromosomal replication control, initiator DnaA, conserved site VM_00005 IPR020591 Chromosomal replication control, initiator DnaA-like VM_00005 IPR024633 DnaA N-terminal domain VM_00005 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_00005 IPR038454 VM_00005 VM_00010 IPR001001 DNA polymerase III, beta chain VM_00010 IPR022634 DNA polymerase III, beta chain, N-terminal VM_00010 IPR022635 DNA polymerase III, beta chain, C-terminal VM_00010 IPR022637 DNA polymerase III, beta chain, central VM_00015 IPR001238 DNA-binding, RecF VM_00015 IPR003395 RecF/RecN/SMC, N-terminal VM_00015 IPR018078 DNA-binding, RecF, conserved site VM_00015 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_00020 IPR000565 DNA topoisomerase, type IIA, subunit B VM_00020 IPR001241 DNA topoisomerase, type IIA VM_00020 IPR002288 DNA gyrase B subunit, C-terminal VM_00020 IPR003594 Histidine kinase-like ATPase, C-terminal domain VM_00020 IPR006171 Toprim domain VM_00020 IPR011557 DNA gyrase, subunit B VM_00020 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 VM_00020 IPR013759 DNA topoisomerase, type IIA, central domain VM_00020 IPR013760 DNA topoisomerase, type IIA-like domain VM_00020 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VM_00020 IPR018522 DNA topoisomerase, type IIA, conserved site VM_00020 IPR020568 Ribosomal protein S5 domain 2-type fold VM_00020 IPR036890 VM_00020 VM_00025 IPR036953 VM_00025 VM_00035 IPR002068 Alpha crystallin/Hsp20 domain VM_00035 IPR008978 HSP20-like chaperone VM_00040 IPR004839 Aminotransferase, class I/classII VM_00040 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VM_00040 IPR015424 Pyridoxal phosphate-dependent transferase VM_00045 IPR008909 DALR anticodon binding VM_00045 IPR015944 Glycine-tRNA ligase, beta subunit VM_00050 IPR002310 Glycine-tRNA ligase, alpha subunit VM_00055 IPR001727 Uncharacterised protein family UPF0016 VM_00065 IPR001455 TusA-like domain VM_00065 IPR022931 Sulphurtransferase TusA VM_00065 IPR036868 VM_00065 VM_00075 IPR000847 Transcription regulator HTH, LysR VM_00075 IPR005119 LysR, substrate-binding VM_00075 IPR036388 VM_00075 VM_00075 IPR036390 VM_00075 VM_00080 IPR011032 GroES (chaperonin 10)-like VM_00080 IPR013149 Alcohol dehydrogenase, C-terminal VM_00080 IPR013154 Alcohol dehydrogenase GroES-like VM_00080 IPR014188 Acrylyl-CoA reductase AcuI VM_00080 IPR020843 Polyketide synthase, enoylreductase VM_00080 IPR036291 VM_00080 VM_00085 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site VM_00085 IPR001721 ACT-like domain VM_00085 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VM_00085 IPR005787 Threonine dehydratase, biosynthetic VM_00085 IPR036052 VM_00085 VM_00085 IPR038110 VM_00085 VM_00090 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase VM_00090 IPR004404 Dihydroxy-acid dehydratase VM_00090 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site VM_00090 IPR037237 VM_00090 VM_00095 IPR001544 Aminotransferase, class IV VM_00095 IPR005785 Branched-chain amino acid aminotransferase I VM_00095 IPR018300 Aminotransferase, class IV, conserved site VM_00095 IPR036038 VM_00095 VM_00105 IPR000399 TPP-binding enzyme, conserved site VM_00105 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding VM_00105 IPR012000 Thiamine pyrophosphate enzyme, central domain VM_00105 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain VM_00105 IPR012846 Acetolactate synthase, large subunit, biosynthetic VM_00105 IPR029035 DHS-like NAD/FAD-binding domain VM_00105 IPR029061 Thiamin diphosphate-binding fold VM_00110 IPR000523 Magnesium chelatase, ChlI subunit VM_00110 IPR001208 Mini-chromosome maintenance, DNA-dependent ATPase VM_00110 IPR003593 AAA+ ATPase domain VM_00110 IPR004482 Mg chelatase-related protein VM_00110 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VM_00110 IPR020568 Ribosomal protein S5 domain 2-type fold VM_00110 IPR025158 Mg chelatase-related protein, C-terminal domain VM_00110 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_00115 IPR002123 Phospholipid/glycerol acyltransferase VM_00120 IPR001853 DSBA-like thioredoxin domain VM_00120 IPR017937 Thioredoxin, conserved site VM_00120 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL VM_00120 IPR036249 VM_00120 VM_00125 IPR002575 Aminoglycoside phosphotransferase VM_00125 IPR011009 Protein kinase-like domain VM_00125 IPR032882 VM_00125 VM_00130 IPR013783 Immunoglobulin-like fold VM_00130 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG VM_00130 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VM_00130 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VM_00130 IPR032879 VM_00130 VM_00135 IPR009383 Protein of unknown function DUF1040 VM_00135 IPR038134 VM_00135 VM_00145 IPR009776 Sporulation stage 0, protein M VM_00150 IPR004254 Hly-III-related VM_00150 IPR005744 HylII VM_00155 IPR021501 Protein of unknown function DUF3157 VM_00160 IPR003445 Cation transporter VM_00160 IPR004772 Potassium uptake protein TrkH family VM_00165 IPR003148 Regulator of K+ conductance, N-terminal VM_00165 IPR006036 Potassium uptake protein TrkA VM_00165 IPR006037 Regulator of K+ conductance, C-terminal VM_00165 IPR036291 VM_00165 VM_00165 IPR036721 VM_00165 VM_00170 IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p VM_00170 IPR004573 rRNA small subunit methyltransferase B VM_00170 IPR006027 NusB/RsmB/TIM44 VM_00170 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site VM_00170 IPR023267 RNA (C5-cytosine) methyltransferase VM_00170 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VM_00170 IPR035926 VM_00170 VM_00175 IPR001555 Phosphoribosylglycinamide formyltransferase, active site VM_00175 IPR002376 Formyl transferase, N-terminal VM_00175 IPR005793 Formyl transferase, C-terminal VM_00175 IPR005794 Methionyl-tRNA formyltransferase VM_00175 IPR011034 Formyl transferase, C-terminal-like VM_00175 IPR036477 VM_00175 VM_00175 IPR037022 VM_00175 VM_00180 IPR023635 Peptide deformylase VM_00180 IPR036821 VM_00180 VM_00185 IPR018392 LysM domain VM_00185 IPR036779 VM_00185 VM_00190 IPR003488 DNA recombination-mediator protein A VM_00190 IPR036388 VM_00190 VM_00195 IPR007456 Protein of unknown function DUF494 VM_00200 IPR013498 DNA topoisomerase, type IA, zn finger VM_00205 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type VM_00205 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit VM_00205 IPR011054 Rudiment single hybrid motif VM_00205 IPR013815 ATP-grasp fold, subdomain 1 VM_00205 IPR016185 Pre-ATP-grasp domain VM_00210 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain VM_00210 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE VM_00210 IPR033747 VM_00210 VM_00210 IPR035893 VM_00210 VM_00215 IPR006070 YrdC-like domain VM_00215 IPR017945 DHBP synthase RibB-like alpha/beta domain VM_00215 IPR023535 Threonylcarbamoyl-AMP synthase VM_00220 IPR001260 Coproporphyrinogen III oxidase, aerobic VM_00220 IPR018375 Coproporphyrinogen III oxidase, conserved site VM_00220 IPR036406 VM_00220 VM_00225 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase VM_00225 IPR011342 Shikimate dehydrogenase VM_00225 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal VM_00225 IPR022893 Shikimate, quinate/shikimate dehydrogenase VM_00225 IPR036291 VM_00225 VM_00230 IPR009962 Protein of unknown function DUF1488 VM_00230 IPR036692 VM_00230 VM_00235 IPR001451 Bacterial transferase hexapeptide repeat VM_00235 IPR011004 Trimeric LpxA-like VM_00280 IPR003691 Putative fluoride ion transporter CrcB VM_00285 IPR002817 Thiamine biosynthesis protein ThiC VM_00285 IPR025747 ThiC-associated domain VM_00285 IPR037509 VM_00285 VM_00285 IPR038521 VM_00285 VM_00290 IPR013785 Aldolase-type TIM barrel VM_00290 IPR022998 Thiamin phosphate synthase superfamily VM_00290 IPR034291 VM_00290 VM_00290 IPR036206 VM_00290 VM_00295 IPR000594 UBA/THIF-type NAD/FAD binding fold VM_00295 IPR035985 VM_00295 VM_00300 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 VM_00300 IPR010035 ThiS, thiamine-biosynthesis VM_00300 IPR012675 Beta-grasp domain VM_00300 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VM_00305 IPR008867 Thiazole biosynthesis VM_00305 IPR013785 Aldolase-type TIM barrel VM_00305 IPR033983 VM_00305 VM_00310 IPR007197 Radical SAM VM_00310 IPR010722 Biotin and thiamin synthesis-associated domain VM_00310 IPR012726 Thiazole biosynthesis ThiH VM_00310 IPR013785 Aldolase-type TIM barrel VM_00315 IPR000587 Creatinase, N-terminal VM_00315 IPR000994 Peptidase M24, structural domain VM_00315 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VM_00315 IPR032416 VM_00315 VM_00315 IPR036005 VM_00315 VM_00320 IPR000847 Transcription regulator HTH, LysR VM_00320 IPR005119 LysR, substrate-binding VM_00320 IPR036388 VM_00320 VM_00320 IPR036390 VM_00320 VM_00325 IPR004812 Drug resistance transporter Bcr/CmlA subfamily VM_00325 IPR005829 Sugar transporter, conserved site VM_00325 IPR011701 Major facilitator superfamily VM_00325 IPR036259 VM_00325 VM_00335 IPR000485 AsnC-type HTH domain VM_00335 IPR011008 Dimeric alpha-beta barrel VM_00335 IPR019887 Transcription regulator AsnC-type, C-terminal VM_00335 IPR019888 Transcription regulator AsnC-type VM_00335 IPR036388 VM_00335 VM_00335 IPR036390 VM_00335 VM_00340 IPR000014 PAS domain VM_00340 IPR000160 GGDEF domain VM_00340 IPR001633 EAL domain VM_00340 IPR029787 Nucleotide cyclase VM_00340 IPR035919 VM_00340 VM_00340 IPR035965 VM_00340 VM_00345 IPR007536 Ribosomal RNA small subunit methyltransferase J VM_00345 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VM_00355 IPR000620 Drug/metabolite transporter VM_00355 IPR004779 Carboxylate/Amino Acid/Amine Transporter VM_00360 IPR006015 Universal stress protein A VM_00360 IPR006016 UspA VM_00360 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_00370 IPR008331 Ferritin/DPS protein domain VM_00370 IPR009078 Ferritin-like superfamily VM_00370 IPR012347 Ferritin-related VM_00375 IPR019598 Universal stress protein B VM_00380 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like VM_00380 IPR023166 HI0933 insert-like domain VM_00380 IPR036188 VM_00380 VM_00385 IPR000014 PAS domain VM_00385 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_00385 IPR013655 PAS fold-3 VM_00385 IPR035965 VM_00385 VM_00390 IPR000620 Drug/metabolite transporter VM_00395 IPR003798 DNA recombination RmuC VM_00400 IPR004033 UbiE/COQ5 methyltransferase VM_00400 IPR023576 UbiE/COQ5 methyltransferase, conserved site VM_00400 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VM_00405 IPR003033 SCP2 sterol-binding domain VM_00405 IPR036527 VM_00405 VM_00410 IPR004147 UbiB domain VM_00410 IPR010232 Probable protein kinase UbiB VM_00410 IPR011009 Protein kinase-like domain VM_00415 IPR003369 Sec-independent protein translocase protein TatA/B/E VM_00415 IPR006312 Sec-independent protein translocase protein TatA/E VM_00420 IPR003369 Sec-independent protein translocase protein TatA/B/E VM_00420 IPR018448 Twin-arginine translocation protein TatB VM_00425 IPR002033 Sec-independent periplasmic protein translocase TatC VM_00425 IPR019820 Sec-independent periplasmic protein translocase, conserved site VM_00430 IPR002528 Multi antimicrobial extrusion protein VM_00435 IPR007213 Leucine carboxyl methyltransferase VM_00435 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP VM_00435 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VM_00440 IPR006197 Peptidase S24, LexA-like VM_00440 IPR006199 LexA repressor, DNA-binding domain VM_00440 IPR006200 LexA repressor VM_00440 IPR015927 Peptidase S24/S26A/S26B/S26C VM_00440 IPR036286 VM_00440 VM_00440 IPR036388 VM_00440 VM_00440 IPR036390 VM_00440 VM_00445 IPR002123 Phospholipid/glycerol acyltransferase VM_00445 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase VM_00445 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB VM_00450 IPR000537 UbiA prenyltransferase family VM_00450 IPR006370 4-hydroxybenzoate polyprenyl transferase VM_00455 IPR007440 Chorismate--pyruvate lyase VM_00455 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain VM_00465 IPR005503 Flagellar basal body-associated protein FliL VM_00470 IPR022732 Peptidase S54, GlpG peptidase, N-terminal VM_00470 IPR022764 Peptidase S54, rhomboid domain VM_00470 IPR023662 Rhomboid protease GlpG VM_00470 IPR035952 VM_00470 VM_00470 IPR038236 VM_00470 VM_00475 IPR001763 Rhodanese-like domain VM_00475 IPR023695 Thiosulfate sulfurtransferase, bacterial VM_00475 IPR036873 VM_00475 VM_00485 IPR001130 TatD family VM_00485 IPR015991 Uncharacterised deoxyribonuclease TatD-type VM_00485 IPR032466 VM_00485 VM_00490 IPR001731 Porphobilinogen synthase VM_00490 IPR013785 Aldolase-type TIM barrel VM_00490 IPR030656 VM_00490 VM_00495 IPR000182 GNAT domain VM_00495 IPR016181 Acyl-CoA N-acyltransferase VM_00500 IPR001098 DNA-directed DNA polymerase, family A, palm domain VM_00500 IPR002298 DNA polymerase A VM_00500 IPR002421 5'-3' exonuclease, N-terminal VM_00500 IPR002562 3'-5' exonuclease domain VM_00500 IPR008918 Helix-hairpin-helix motif, class 2 VM_00500 IPR012337 Ribonuclease H-like domain VM_00500 IPR018320 DNA polymerase 1 VM_00500 IPR019760 DNA-directed DNA polymerase, family A, conserved site VM_00500 IPR020045 5'-3' exonuclease, C-terminal domain VM_00500 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal VM_00500 IPR029060 PIN domain-like VM_00500 IPR036279 VM_00500 VM_00500 IPR036397 VM_00500 VM_00505 IPR003201 Transposase Tn5, dimerisation VM_00505 IPR012337 Ribonuclease H-like domain VM_00505 IPR014735 Transposase, Tn5-like, N-terminal VM_00505 IPR014736 Transposase, Tn5-like, core VM_00505 IPR014737 Transposase, Tn5-like, C-terminal VM_00505 IPR038215 VM_00505 VM_00510 IPR006073 GTP binding domain VM_00510 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC VM_00510 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_00515 IPR008168 Cytochrome c, class IC VM_00515 IPR009056 Cytochrome c-like domain VM_00515 IPR024167 Cytochrome c4 VM_00515 IPR036909 VM_00515 VM_00520 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VM_00525 IPR007336 Der GTPase activator VM_00530 IPR019617 Domain of unknown function DUF2489 VM_00535 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN VM_00535 IPR006638 Elongator protein 3/MiaB/NifB VM_00535 IPR007197 Radical SAM VM_00535 IPR010723 HemN, C-terminal domain VM_00535 IPR023404 Radical SAM, alpha/beta horseshoe VM_00540 IPR005254 Heme biosynthesis-associated TPR protein VM_00540 IPR010817 HemY, N-terminal VM_00540 IPR011990 Tetratricopeptide-like helical domain VM_00545 IPR007470 HemX VM_00550 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase VM_00550 IPR036108 VM_00550 VM_00555 IPR000860 Tetrapyrrole biosynthesis, hydroxymethylbilane synthase VM_00555 IPR022417 Porphobilinogen deaminase, N-terminal VM_00555 IPR022418 Porphobilinogen deaminase, C-terminal VM_00555 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site VM_00555 IPR036803 VM_00555 VM_00565 IPR000274 Adenylate cyclase, class-I VM_00565 IPR024685 Adenylate cyclase class-I, N-terminal domain VM_00570 IPR002908 Frataxin/CyaY VM_00570 IPR020895 Frataxin conserved site VM_00570 IPR036524 VM_00570 VM_00575 IPR032831 VM_00575 VM_00580 IPR000183 Ornithine/DAP/Arg decarboxylase VM_00580 IPR002986 Diaminopimelate decarboxylase, LysA VM_00580 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal VM_00580 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal VM_00580 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal VM_00580 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site VM_00580 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site VM_00580 IPR029066 PLP-binding barrel VM_00585 IPR001653 Diaminopimelate epimerase, DapF VM_00585 IPR018510 Diaminopimelate epimerase, active site VM_00590 IPR007435 Protein of unknown function DUF484 VM_00590 IPR029016 GAF domain-like VM_00595 IPR002104 Integrase, catalytic VM_00595 IPR004107 Integrase, SAM-like, N-terminal VM_00595 IPR010998 Integrase, Lambda-type, N-terminal VM_00595 IPR011010 DNA breaking-rejoining enzyme, catalytic core VM_00595 IPR011931 Tyrosine recombinase XerC VM_00595 IPR013762 Integrase-like, catalytic core VM_00595 IPR023009 Tyrosine recombinase XerC/XerD VM_00600 IPR006439 HAD hydrolase, subfamily IA VM_00600 IPR023214 HAD-like domain VM_00600 IPR036412 VM_00600 VM_00605 IPR000160 GGDEF domain VM_00605 IPR001633 EAL domain VM_00605 IPR013702 FIST domain, N-terminal VM_00605 IPR019494 FIST C domain VM_00605 IPR029787 Nucleotide cyclase VM_00605 IPR035919 VM_00605 VM_00610 IPR005636 DTW VM_00620 IPR000150 Cof protein VM_00620 IPR006379 HAD-superfamily hydrolase, subfamily IIB VM_00620 IPR023214 HAD-like domain VM_00620 IPR036412 VM_00620 VM_00625 IPR022742 Putative lysophospholipase VM_00625 IPR029058 Alpha/Beta hydrolase fold VM_00630 IPR001123 Lysine-type exporter protein (LYSE/YGGA) VM_00635 IPR001633 EAL domain VM_00635 IPR013976 Metal-dependent hydrolase HDOD VM_00635 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing VM_00635 IPR035919 VM_00635 VM_00640 IPR002177 DNA-binding protein Dps VM_00640 IPR008331 Ferritin/DPS protein domain VM_00640 IPR009078 Ferritin-like superfamily VM_00640 IPR012347 Ferritin-related VM_00640 IPR023188 DNA-binding protein Dps, conserved site VM_00645 IPR002656 Acyltransferase 3 VM_00650 IPR019635 Protein of unknown function DUF2500 VM_00665 IPR012506 YhhN-like VM_00670 IPR009525 Protein of unknown function DUF1145 VM_00675 IPR002052 DNA methylase, N-6 adenine-specific, conserved site VM_00675 IPR004398 RNA methyltransferase, RsmD VM_00675 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VM_00680 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain VM_00680 IPR003593 AAA+ ATPase domain VM_00680 IPR004390 Signal-recognition particle receptor FtsY VM_00680 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle VM_00680 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_00680 IPR036225 VM_00680 VM_00685 IPR003439 ABC transporter-like VM_00685 IPR003593 AAA+ ATPase domain VM_00685 IPR005286 Cell division protein FtsE, ATP-binding VM_00685 IPR017871 ABC transporter, conserved site VM_00685 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_00690 IPR004513 ABC transporter, cell division protein FtsX VM_00695 IPR000943 RNA polymerase sigma-70 VM_00695 IPR007627 RNA polymerase sigma-70 region 2 VM_00695 IPR007630 RNA polymerase sigma-70 region 4 VM_00695 IPR009042 RNA polymerase sigma-70 region 1.2 VM_00695 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria VM_00695 IPR013324 RNA polymerase sigma factor, region 3/4 VM_00695 IPR013325 RNA polymerase sigma factor, region 2 VM_00695 IPR014284 RNA polymerase sigma-70 like domain VM_00695 IPR036388 VM_00695 VM_00705 IPR001100 VM_00705 VM_00705 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VM_00705 IPR016156 FAD/NAD-linked reductase, dimerisation domain VM_00705 IPR022962 Soluble pyridine nucleotide transhydrogenase VM_00705 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain VM_00705 IPR036188 VM_00705 VM_00710 IPR001647 DNA-binding HTH domain, TetR-type VM_00710 IPR009057 Homeodomain-like VM_00710 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VM_00715 IPR009867 Protein of unknown function DUF1422 VM_00720 IPR010280 (Uracil-5)-methyltransferase family VM_00720 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA VM_00720 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VM_00720 IPR030390 VM_00720 VM_00720 IPR030391 VM_00720 VM_00725 IPR000531 TonB-dependent receptor, beta-barrel VM_00725 IPR010101 TonB-dependent vitamin B12 transporter BtuB VM_00725 IPR010916 TonB box, conserved site VM_00725 IPR010917 TonB-dependent receptor, conserved site VM_00725 IPR012910 TonB-dependent receptor, plug VM_00725 IPR036942 VM_00725 VM_00725 IPR037066 VM_00725 VM_00730 IPR002761 DUF71 domain VM_00730 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_00735 IPR001920 Asp/Glu racemase VM_00735 IPR004391 Glutamate racemase VM_00735 IPR015942 Asp/Glu/hydantoin racemase VM_00735 IPR018187 Asp/Glu racemase, active site VM_00740 IPR000504 RNA recognition motif domain VM_00740 IPR012677 Nucleotide-binding, alpha-beta plait VM_00740 IPR035979 VM_00740 VM_00800 IPR001365 Adenosine/AMP deaminase domain VM_00800 IPR006330 Adenosine/adenine deaminase VM_00800 IPR028893 Adenosine deaminase VM_00800 IPR032466 VM_00800 VM_00805 IPR000160 GGDEF domain VM_00805 IPR001633 EAL domain VM_00805 IPR029787 Nucleotide cyclase VM_00805 IPR033479 VM_00805 VM_00805 IPR035919 VM_00805 VM_00810 IPR001789 Signal transduction response regulator, receiver domain VM_00810 IPR002078 RNA polymerase sigma factor 54 interaction domain VM_00810 IPR002197 DNA binding HTH domain, Fis-type VM_00810 IPR003593 AAA+ ATPase domain VM_00810 IPR009057 Homeodomain-like VM_00810 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) VM_00810 IPR011006 CheY-like superfamily VM_00810 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VM_00810 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VM_00810 IPR025944 Sigma-54 interaction domain, conserved site VM_00810 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_00815 IPR000014 PAS domain VM_00815 IPR003594 Histidine kinase-like ATPase, C-terminal domain VM_00815 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain VM_00815 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_00815 IPR013767 PAS fold VM_00815 IPR035965 VM_00815 VM_00815 IPR036097 VM_00815 VM_00815 IPR036890 VM_00815 VM_00820 IPR013783 Immunoglobulin-like fold VM_00820 IPR025392 Domain of unknown function DUF4124 VM_00825 IPR001637 Glutamine synthetase class-I, adenylation site VM_00825 IPR004809 Glutamine synthetase type I VM_00825 IPR008146 Glutamine synthetase, catalytic domain VM_00825 IPR008147 Glutamine synthetase, beta-Grasp VM_00825 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain VM_00825 IPR027302 Glutamine synthetase, N-terminal conserved site VM_00825 IPR027303 Glutamine synthetase, glycine-rich site VM_00825 IPR036651 VM_00825 VM_00835 IPR000640 Translation elongation factor EFG, V domain VM_00835 IPR000795 Elongation factor, GTP-binding domain VM_00835 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 VM_00835 IPR005225 Small GTP-binding protein domain VM_00835 IPR006298 GTP-binding protein TypA VM_00835 IPR009000 Translation protein, beta-barrel domain VM_00835 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_00835 IPR031157 VM_00835 VM_00835 IPR035647 VM_00835 VM_00840 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_00840 IPR038727 VM_00840 VM_00845 IPR017039 Virulence factor BrkB VM_00845 IPR023679 Uncharacterised protein family UPF0761, bacterial VM_00850 IPR003732 D-tyrosyl-tRNA(Tyr) deacylase VM_00850 IPR023509 D-Tyr tRNAtyr deacylase-like domain VM_00855 IPR000182 GNAT domain VM_00855 IPR012660 Thioesterase, putative VM_00855 IPR016181 Acyl-CoA N-acyltransferase VM_00855 IPR029069 HotDog domain VM_00860 IPR007844 AsmA VM_00865 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising VM_00865 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal VM_00865 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal VM_00865 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site VM_00870 IPR000397 Heat shock protein Hsp33 VM_00870 IPR016153 Heat shock protein Hsp33, N-terminal VM_00870 IPR016154 Heat shock protein Hsp33, C-terminal VM_00870 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain VM_00875 IPR002942 RNA-binding S4 domain VM_00875 IPR025708 Heat shock protein 15 VM_00875 IPR036986 VM_00875 VM_00880 IPR001639 Type II secretion system protein C VM_00880 IPR024961 VM_00880 VM_00880 IPR036034 VM_00880 VM_00885 IPR001775 GspD/PilQ family VM_00885 IPR004845 Type II secretion system GspD, conserved site VM_00885 IPR004846 Type II/III secretion system VM_00885 IPR005644 NolW-like VM_00885 IPR013356 Type II secretion system GspD VM_00885 IPR038591 VM_00885 VM_00890 IPR001482 Type II secretion system protein E VM_00890 IPR003593 AAA+ ATPase domain VM_00890 IPR013369 Type II secretion system GspE VM_00890 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_00890 IPR037257 VM_00890 VM_00895 IPR001992 Type II secretion system conserved site VM_00895 IPR003004 GspF/PilC family VM_00895 IPR011850 General secretion pathway protein F VM_00895 IPR018076 Type II secretion system F domain VM_00900 IPR000983 Bacterial general secretion pathway protein G-type pilin VM_00900 IPR010054 General secretion pathway protein G VM_00900 IPR012902 Prokaryotic N-terminal methylation site VM_00900 IPR013545 Type II secretion system protein G VM_00905 IPR002416 Type II secretion system protein H VM_00905 IPR012902 Prokaryotic N-terminal methylation site VM_00905 IPR022346 General secretion pathway, GspH VM_00910 IPR003413 Type II secretion system protein I domain VM_00910 IPR010052 Type II secretion system protein I VM_00910 IPR012902 Prokaryotic N-terminal methylation site VM_00915 IPR010055 Type II secretion system protein J VM_00915 IPR012902 Prokaryotic N-terminal methylation site VM_00920 IPR005628 General secretion pathway protein K VM_00920 IPR038072 VM_00920 VM_00925 IPR007812 Type II secretion system protein L VM_00925 IPR024230 GspL, cytoplasmic actin-ATPase-like domain VM_00925 IPR025691 GspL periplasmic domain VM_00930 IPR007690 Type II secretion system, protein M VM_00930 IPR023229 Type II secretion system protein M, periplasmic domain VM_00935 IPR022792 Type II secretion system, protein N VM_00940 IPR000760 Inositol monophosphatase VM_00940 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial VM_00945 IPR000086 NUDIX hydrolase domain VM_00945 IPR015797 NUDIX hydrolase domain-like VM_00945 IPR020084 NUDIX hydrolase, conserved site VM_00945 IPR020476 NUDIX hydrolase VM_00950 IPR000361 FeS cluster biogenesis VM_00950 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal VM_00950 IPR017726 Fe/S biogenesis protein NfuA VM_00950 IPR034904 VM_00950 VM_00950 IPR035903 VM_00950 VM_00955 IPR000836 Phosphoribosyltransferase domain VM_00955 IPR029057 Phosphoribosyltransferase-like VM_00960 IPR000073 Alpha/beta hydrolase fold-1 VM_00960 IPR010076 Pimelyl-[acyl-carrier protein] methyl ester esterase VM_00960 IPR029058 Alpha/Beta hydrolase fold VM_00970 IPR003029 Ribosomal protein S1, RNA-binding domain VM_00970 IPR006641 YqgF/RNase H-like domain VM_00970 IPR010994 RuvA domain 2-like VM_00970 IPR012337 Ribonuclease H-like domain VM_00970 IPR012340 Nucleic acid-binding, OB-fold VM_00970 IPR018974 Tex-like protein, N-terminal VM_00970 IPR022967 RNA-binding domain, S1 VM_00970 IPR023319 Tex-like protein, HTH domain VM_00970 IPR023323 Tex-like domain VM_00970 IPR032639 VM_00970 VM_00970 IPR037027 VM_00970 VM_00975 IPR011009 Protein kinase-like domain VM_00980 IPR036457 VM_00980 VM_00985 IPR036465 VM_00985 VM_00990 IPR024467 Domain of unknown function DUF2384 VM_00995 IPR015927 Peptidase S24/S26A/S26B/S26C VM_00995 IPR036286 VM_00995 VM_01000 IPR001126 DNA-repair protein, UmuC-like VM_01000 IPR017961 DNA polymerase, Y-family, little finger domain VM_01000 IPR024728 DNA polymerase type-Y, HhH motif VM_01000 IPR025188 Domain of unknown function DUF4113 VM_01005 IPR011646 KAP P-loop VM_01015 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_01020 IPR001130 TatD family VM_01020 IPR032466 VM_01020 VM_01035 IPR018306 Bacteriophage T5, Orf172 DNA-binding VM_01035 IPR025280 Domain of unknown function DUF4041 VM_01060 IPR001387 Cro/C1-type helix-turn-helix domain VM_01060 IPR010982 Lambda repressor-like, DNA-binding domain VM_01070 IPR006935 Helicase/UvrB domain VM_01070 IPR014001 Helicase, superfamily 1/2, ATP-binding domain VM_01070 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_01080 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal VM_01080 IPR006358 Transcription elongation factor GreB VM_01080 IPR018151 Transcription elongation factor, GreA/GreB, conserved site VM_01080 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal VM_01080 IPR023459 Transcription elongation factor GreA/GreB family VM_01080 IPR028624 Transcription elongation factor GreA/GreB VM_01080 IPR036805 VM_01080 VM_01080 IPR036953 VM_01080 VM_01090 IPR002104 Integrase, catalytic VM_01090 IPR011010 DNA breaking-rejoining enzyme, catalytic core VM_01090 IPR013762 Integrase-like, catalytic core VM_01090 IPR024965 Putative phage integrase VM_01095 IPR002104 Integrase, catalytic VM_01095 IPR011010 DNA breaking-rejoining enzyme, catalytic core VM_01095 IPR013762 Integrase-like, catalytic core VM_01105 IPR000792 Transcription regulator LuxR, C-terminal VM_01105 IPR016032 Signal transduction response regulator, C-terminal effector VM_01105 IPR036388 VM_01105 VM_01110 IPR025997 Periplasmic binding protein domain VM_01110 IPR028082 Periplasmic binding protein-like I VM_01115 IPR003439 ABC transporter-like VM_01115 IPR003593 AAA+ ATPase domain VM_01115 IPR017871 ABC transporter, conserved site VM_01115 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_01120 IPR001851 ABC transporter, permease VM_01125 IPR001764 Glycoside hydrolase, family 3, N-terminal VM_01125 IPR017853 Glycoside hydrolase, superfamily VM_01125 IPR019800 Glycoside hydrolase, family 3, active site VM_01125 IPR036881 VM_01125 VM_01125 IPR036962 VM_01125 VM_01130 IPR003610 Carbohydrate-binding module family 5/12 VM_01130 IPR011049 Serralysin-like metalloprotease, C-terminal VM_01130 IPR036573 VM_01130 VM_01135 IPR001789 Signal transduction response regulator, receiver domain VM_01135 IPR001867 Signal transduction response regulator, C-terminal VM_01135 IPR011006 CheY-like superfamily VM_01135 IPR016032 Signal transduction response regulator, C-terminal effector VM_01135 IPR036388 VM_01135 VM_01140 IPR003594 Histidine kinase-like ATPase, C-terminal domain VM_01140 IPR003660 HAMP linker domain VM_01140 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain VM_01140 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_01140 IPR036097 VM_01140 VM_01140 IPR036890 VM_01140 VM_01145 IPR006042 Xanthine/uracil permease VM_01145 IPR006043 Xanthine/uracil/vitamin C permease VM_01145 IPR017588 Xanthine permease VM_01150 IPR001650 Helicase, C-terminal VM_01150 IPR004609 ATP-dependent DNA helicase RecG VM_01150 IPR011545 DEAD/DEAH box helicase domain VM_01150 IPR012340 Nucleic acid-binding, OB-fold VM_01150 IPR014001 Helicase, superfamily 1/2, ATP-binding domain VM_01150 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_01150 IPR033454 VM_01150 VM_01155 IPR002912 ACT domain VM_01155 IPR003607 HD/PDEase domain VM_01155 IPR004095 TGS VM_01155 IPR004811 RelA/SpoT family VM_01155 IPR007685 RelA/SpoT VM_01155 IPR012675 Beta-grasp domain VM_01155 IPR012676 TGS-like VM_01160 IPR003716 DNA-directed RNA polymerase, omega subunit VM_01160 IPR006110 RNA polymerase, subunit omega/K/RPB6 VM_01160 IPR012293 RNA polymerase subunit, RPB6/omega VM_01160 IPR036161 VM_01160 VM_01165 IPR008145 Guanylate kinase/L-type calcium channel beta subunit VM_01165 IPR017665 Guanylate kinase VM_01165 IPR020590 Guanylate kinase, conserved site VM_01165 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_01170 IPR003744 Protein of unknown function DUF165 VM_01175 IPR001734 Sodium/solute symporter VM_01175 IPR018212 Sodium/solute symporter, conserved site VM_01175 IPR019899 Sodium/solute symporter, VC2705 subfamily VM_01175 IPR038377 VM_01175 VM_01180 IPR019886 Sodium symporter small subunit, predicted VM_01185 IPR015927 Peptidase S24/S26A/S26B/S26C VM_01185 IPR036286 VM_01185 VM_01190 IPR010982 Lambda repressor-like, DNA-binding domain VM_01190 IPR038722 VM_01190 VM_01195 IPR004189 Bacteriophage Mu, transposase VM_01195 IPR009004 Transposase, Mu, C-terminal VM_01195 IPR009057 Homeodomain-like VM_01195 IPR009061 DNA binding domain, putative VM_01195 IPR012337 Ribonuclease H-like domain VM_01195 IPR015126 Mu DNA binding, I gamma subdomain VM_01195 IPR015378 Transposase-like, Mu, C-terminal VM_01195 IPR036388 VM_01195 VM_01195 IPR036397 VM_01195 VM_01200 IPR003593 AAA+ ATPase domain VM_01200 IPR009084 B transposition protein, C-terminal VM_01200 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_01200 IPR036733 VM_01200 VM_01225 IPR021505 Bacteriophage B3, Orf6 VM_01250 IPR015947 PUA-like domain VM_01250 IPR039440 VM_01250 VM_01280 IPR009363 Bacteriophage Mu, Gp16 VM_01290 IPR009057 Homeodomain-like VM_01290 IPR014875 Mor transcription activator VM_01295 IPR008565 Protein of unknown function DUF847 VM_01295 IPR018537 Peptidoglycan binding domain VM_01295 IPR023346 Lysozyme-like domain VM_01310 IPR000962 Zinc finger, DksA/TraR C4-type VM_01310 IPR012783 Zinc finger, C4 DksA/TraR-type VM_01340 IPR006528 Phage head morphogenesis domain VM_01360 IPR013830 VM_01360 VM_01360 IPR036514 VM_01360 VM_01375 IPR018774 Bacteriophage Mu, GpT VM_01385 IPR009752 Bacteriophage Mu, Gp36 VM_01390 IPR006522 Phage virion morphogensis protein VM_01400 IPR024400 Protein of unknown function DUF2635 VM_01410 IPR019596 Bacteriophage Mu, GpM, tail tube VM_01415 IPR019289 Bacteriophage tail protein Gp41, putative VM_01425 IPR009826 DNA circulation, N-terminal VM_01430 IPR023399 Baseplate-like protein, two-layer sandwich domain VM_01430 IPR026276 Baseplate protein GpP VM_01435 IPR013046 Bacteriophage Mu/P2, baseplate assembly VM_01435 IPR014462 Bacteriophage Mu, Gp45 VM_01440 IPR010877 Bacteriophage Mu, Gp46 VM_01445 IPR006949 Baseplate assembly protein J-like, predicted VM_01450 IPR018755 Bacteriophage Mu, Gp48 VM_01465 IPR005170 Transporter-associated domain VM_01465 IPR006037 Regulator of K+ conductance, C-terminal VM_01465 IPR006153 Cation/H+ exchanger VM_01465 IPR023729 K(+)/H(+) antiporter NhaP2 VM_01465 IPR036318 VM_01465 VM_01465 IPR036721 VM_01465 VM_01465 IPR038770 VM_01465 VM_01470 IPR000792 Transcription regulator LuxR, C-terminal VM_01470 IPR001789 Signal transduction response regulator, receiver domain VM_01470 IPR011006 CheY-like superfamily VM_01470 IPR016032 Signal transduction response regulator, C-terminal effector VM_01470 IPR036388 VM_01470 VM_01475 IPR003834 Cytochrome c assembly protein, transmembrane domain VM_01475 IPR017937 Thioredoxin, conserved site VM_01475 IPR022910 Thiol:disulphide interchange protein DsbD VM_01475 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain VM_01475 IPR036249 VM_01475 VM_01475 IPR036929 VM_01475 VM_01480 IPR004668 Anaerobic c4-dicarboxylate membrane transporter VM_01485 IPR000362 Fumarate lyase family VM_01485 IPR004708 Aspartate ammonia-lyase VM_01485 IPR008948 L-Aspartase-like VM_01485 IPR018951 Fumarase C, C-terminal VM_01485 IPR020557 Fumarate lyase, conserved site VM_01485 IPR022761 Fumarate lyase, N-terminal VM_01485 IPR024083 Fumarase/histidase, N-terminal VM_01490 IPR007313 FxsA cytoplasmic membrane protein VM_01495 IPR001537 tRNA/rRNA methyltransferase, SpoU type VM_01495 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase VM_01495 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VM_01495 IPR029028 Alpha/beta knot methyltransferases VM_01500 IPR001189 Manganese/iron superoxide dismutase VM_01500 IPR019831 Manganese/iron superoxide dismutase, N-terminal VM_01500 IPR019832 Manganese/iron superoxide dismutase, C-terminal VM_01500 IPR019833 Manganese/iron superoxide dismutase, binding site VM_01500 IPR036314 VM_01500 VM_01500 IPR036324 VM_01500 VM_01505 IPR003594 Histidine kinase-like ATPase, C-terminal domain VM_01505 IPR003660 HAMP linker domain VM_01505 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain VM_01505 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_01505 IPR032404 VM_01505 VM_01505 IPR036097 VM_01505 VM_01505 IPR036890 VM_01505 VM_01505 IPR038515 VM_01505 VM_01510 IPR001789 Signal transduction response regulator, receiver domain VM_01510 IPR001867 Signal transduction response regulator, C-terminal VM_01510 IPR011006 CheY-like superfamily VM_01510 IPR016032 Signal transduction response regulator, C-terminal effector VM_01510 IPR036388 VM_01510 VM_01515 IPR012899 LTXXQ motif family protein VM_01520 IPR002524 Cation efflux protein VM_01520 IPR027469 Cation efflux protein transmembrane domain VM_01520 IPR027470 Cation efflux protein cytoplasmic domain VM_01520 IPR036837 VM_01520 VM_01525 IPR000023 Phosphofructokinase domain VM_01525 IPR012003 ATP-dependent phosphofructokinase, prokaryotic-type VM_01525 IPR012828 6-phosphofructokinase VM_01525 IPR015912 Phosphofructokinase, conserved site VM_01525 IPR022953 Phosphofructokinase VM_01525 IPR035966 VM_01525 VM_01530 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase VM_01535 IPR009252 Cell division protein ZapB VM_01540 IPR003171 Methylenetetrahydrofolate reductase VM_01540 IPR004620 5,10-methylenetetrahydrofolate reductase VM_01540 IPR029041 FAD-linked oxidoreductase-like VM_01545 IPR001048 Aspartate/glutamate/uridylate kinase VM_01545 IPR001341 Aspartate kinase domain VM_01545 IPR001342 Homoserine dehydrogenase, catalytic VM_01545 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding VM_01545 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I VM_01545 IPR018042 Aspartate kinase, conserved site VM_01545 IPR019811 Homoserine dehydrogenase, conserved site VM_01545 IPR036291 VM_01545 VM_01545 IPR036393 VM_01545 VM_01550 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme VM_01550 IPR011821 O-succinylhomoserine (thiol)-lyase VM_01550 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VM_01550 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VM_01550 IPR015424 Pyridoxal phosphate-dependent transferase VM_01555 IPR002084 Methionine repressor MetJ VM_01555 IPR010985 Ribbon-helix-helix VM_01555 IPR023453 Methionine repressor MetJ domain VM_01560 IPR001891 Malic oxidoreductase VM_01560 IPR012301 Malic enzyme, N-terminal domain VM_01560 IPR012302 Malic enzyme, NAD-binding VM_01560 IPR015884 Malic enzyme, conserved site VM_01560 IPR036291 VM_01560 VM_01560 IPR037062 VM_01560 VM_01565 IPR002150 Ribosomal protein L31 VM_01565 IPR027491 Ribosomal protein L31 type A VM_01565 IPR034704 VM_01565 VM_01570 IPR001650 Helicase, C-terminal VM_01570 IPR005259 Primosomal protein n VM_01570 IPR011545 DEAD/DEAH box helicase domain VM_01570 IPR014001 Helicase, superfamily 1/2, ATP-binding domain VM_01570 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_01575 IPR000843 Transcription regulator HTH, LacI VM_01575 IPR010982 Lambda repressor-like, DNA-binding domain VM_01575 IPR028082 Periplasmic binding protein-like I VM_01580 IPR007730 Sporulation-related domain VM_01580 IPR036680 VM_01580 VM_01585 IPR001353 Proteasome, subunit alpha/beta VM_01585 IPR022281 ATP-dependent protease, HslV subunit VM_01585 IPR029055 Nucleophile aminohydrolases, N-terminal VM_01590 IPR003593 AAA+ ATPase domain VM_01590 IPR003959 ATPase, AAA-type, core VM_01590 IPR004491 Heat shock protein HslU VM_01590 IPR019489 Clp ATPase, C-terminal VM_01590 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_01595 IPR000537 UbiA prenyltransferase family VM_01595 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase VM_01595 IPR026046 UbiA prenyltransferase domain containing protein 1 VM_01600 IPR005493 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase VM_01600 IPR010203 Regulator of ribonuclease activity A VM_01600 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria VM_01600 IPR036704 VM_01600 VM_01605 IPR002528 Multi antimicrobial extrusion protein VM_01610 IPR000652 Triosephosphate isomerase VM_01610 IPR013785 Aldolase-type TIM barrel VM_01610 IPR020861 Triosephosphate isomerase, active site VM_01610 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic VM_01610 IPR035990 VM_01610 VM_01615 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase VM_01615 IPR014347 Tautomerase/MIF superfamily VM_01625 IPR021482 Protein of unknown function DUF3135 VM_01630 IPR036388 VM_01630 VM_01630 IPR036390 VM_01630 VM_01635 IPR011032 GroES (chaperonin 10)-like VM_01635 IPR018369 Chaperonin Cpn10, conserved site VM_01635 IPR020818 Chaperonin Cpn10 VM_01635 IPR037124 VM_01635 VM_01640 IPR001844 Chaperonin Cpn60 VM_01640 IPR002423 Chaperonin Cpn60/TCP-1 VM_01640 IPR018370 Chaperonin Cpn60, conserved site VM_01640 IPR027409 GroEL-like apical domain VM_01640 IPR027410 TCP-1-like chaperonin intermediate domain VM_01640 IPR027413 GroEL-like equatorial domain VM_01650 IPR003739 Lysine-2,3-aminomutase family VM_01650 IPR007197 Radical SAM VM_01650 IPR013785 Aldolase-type TIM barrel VM_01650 IPR022462 Lysine-2,3-aminomutase-like VM_01655 IPR001059 Translation elongation factor P/YeiP, central VM_01655 IPR008991 Translation protein SH3-like domain VM_01655 IPR011768 Translation elongation factor P VM_01655 IPR012340 Nucleic acid-binding, OB-fold VM_01655 IPR013185 Translation elongation factor, KOW-like VM_01655 IPR013852 Translation elongation factor P/YeiP, conserved site VM_01655 IPR014722 Ribosomal protein L2 domain 2 VM_01655 IPR015365 Elongation factor P, C-terminal VM_01655 IPR020599 Translation elongation factor P/YeiP VM_01660 IPR003418 Fumarate reductase, D subunit VM_01660 IPR034804 VM_01660 VM_01665 IPR003510 Fumarate reductase, subunit C VM_01665 IPR034804 VM_01665 VM_01670 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein VM_01670 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site VM_01670 IPR009051 Alpha-helical ferredoxin VM_01670 IPR012675 Beta-grasp domain VM_01670 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VM_01670 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VM_01670 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal VM_01670 IPR036010 VM_01670 VM_01675 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site VM_01675 IPR003953 FAD binding domain VM_01675 IPR005884 Fumarate reductase, flavoprotein subunit VM_01675 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit VM_01675 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal VM_01675 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain VM_01675 IPR036188 VM_01675 VM_01675 IPR037099 VM_01675 VM_01680 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) VM_01680 IPR004525 Elongation factor P--(R)-beta-lysine ligase VM_01680 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal VM_01685 IPR001763 Rhodanese-like domain VM_01685 IPR036873 VM_01685 VM_01690 IPR003708 Bacterial protein export chaperone SecB VM_01690 IPR035958 VM_01690 VM_01695 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal VM_01695 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent VM_01695 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like VM_01695 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal VM_01695 IPR013328 Dehydrogenase, multihelical VM_01695 IPR036291 VM_01695 VM_01700 IPR001451 Bacterial transferase hexapeptide repeat VM_01700 IPR005881 Serine O-acetyltransferase VM_01700 IPR010493 Serine acetyltransferase, N-terminal VM_01700 IPR011004 Trimeric LpxA-like VM_01700 IPR018357 Hexapeptide transferase, conserved site VM_01705 IPR005149 Transcription regulator PadR N-terminal VM_01705 IPR018309 Transcription regulator PadR, C-terminal VM_01705 IPR036388 VM_01705 VM_01705 IPR036390 VM_01705 VM_01710 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain VM_01710 IPR018129 Phosphoenolpyruvate carboxylase, active site VM_01710 IPR021135 Phosphoenolpyruvate carboxylase VM_01710 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type VM_01710 IPR033129 VM_01710 VM_01715 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site VM_01715 IPR002933 Peptidase M20 VM_01715 IPR010169 Acetylornithine deacetylase (ArgE) VM_01715 IPR011650 Peptidase M20, dimerisation domain VM_01715 IPR036264 VM_01715 VM_01720 IPR000534 Semialdehyde dehydrogenase, NAD-binding VM_01720 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 VM_01720 IPR012280 Semialdehyde dehydrogenase, dimerisation domain VM_01720 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site VM_01720 IPR036291 VM_01720 VM_01725 IPR001048 Aspartate/glutamate/uridylate kinase VM_01725 IPR004662 Acetylglutamate kinase VM_01725 IPR036393 VM_01725 VM_01725 IPR037528 VM_01725 VM_01730 IPR001518 Argininosuccinate synthase VM_01730 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_01730 IPR018223 Argininosuccinate synthase, conserved site VM_01730 IPR023434 Argininosuccinate synthase, type 1 subfamily VM_01730 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body VM_01735 IPR000362 Fumarate lyase family VM_01735 IPR008948 L-Aspartase-like VM_01735 IPR009049 Argininosuccinate lyase VM_01735 IPR020557 Fumarate lyase, conserved site VM_01735 IPR022761 Fumarate lyase, N-terminal VM_01735 IPR024083 Fumarase/histidase, N-terminal VM_01735 IPR029419 Argininosuccinate lyase, C-terminal VM_01740 IPR022072 Protein of unknown function DUF3624 VM_01750 IPR002109 Glutaredoxin VM_01750 IPR011767 Glutaredoxin active site VM_01750 IPR011906 Glutaredoxin domain VM_01750 IPR013740 Redoxin VM_01750 IPR014025 Glutaredoxin subgroup VM_01750 IPR036249 VM_01750 VM_01755 IPR000847 Transcription regulator HTH, LysR VM_01755 IPR005119 LysR, substrate-binding VM_01755 IPR036388 VM_01755 VM_01755 IPR036390 VM_01755 VM_01760 IPR001264 Glycosyl transferase, family 51 VM_01760 IPR001460 Penicillin-binding protein, transpeptidase VM_01760 IPR012338 Beta-lactamase/transpeptidase-like VM_01760 IPR023346 Lysozyme-like domain VM_01760 IPR031376 VM_01760 VM_01760 IPR036950 VM_01760 VM_01765 IPR005883 Type IV pilus assembly protein PilM VM_01770 IPR007813 Fimbrial assembly PilN VM_01775 IPR007445 Pilus assembly protein, PilO VM_01775 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 VM_01780 IPR007446 Pilus assembly protein PilP VM_01785 IPR001775 GspD/PilQ family VM_01785 IPR004845 Type II secretion system GspD, conserved site VM_01785 IPR004846 Type II/III secretion system VM_01785 IPR005644 NolW-like VM_01785 IPR011662 Secretin/TonB, short N-terminal VM_01785 IPR013355 Type IV pilus secretin PilQ VM_01785 IPR038591 VM_01785 VM_01790 IPR000623 Shikimate kinase/Threonine synthase-like 1 VM_01790 IPR023000 Shikimate kinase, conserved site VM_01790 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_01790 IPR031322 VM_01790 VM_01795 IPR016037 3-dehydroquinate synthase AroB VM_01795 IPR030960 VM_01795 VM_01795 IPR030963 VM_01795 VM_01800 IPR003593 AAA+ ATPase domain VM_01800 IPR007730 Sporulation-related domain VM_01800 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_01800 IPR036680 VM_01800 VM_01805 IPR002052 DNA methylase, N-6 adenine-specific, conserved site VM_01805 IPR012263 Adenine modification methylase, M.EcoRV-type VM_01805 IPR012327 D12 class N6 adenine-specific DNA methyltransferase VM_01805 IPR023095 Adenine-specific methyltransferase, domain 2 VM_01805 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VM_01810 IPR000056 Ribulose-phosphate 3-epimerase-like VM_01810 IPR011060 Ribulose-phosphate binding barrel VM_01810 IPR013785 Aldolase-type TIM barrel VM_01810 IPR026019 Ribulose-phosphate 3-epimerase VM_01815 IPR006346 2-phosphoglycolate phosphatase, prokaryotic VM_01815 IPR006439 HAD hydrolase, subfamily IA VM_01815 IPR006549 HAD-superfamily hydrolase,subfamily IIIA VM_01815 IPR023198 Phosphoglycolate phosphatase, domain 2 VM_01815 IPR023214 HAD-like domain VM_01815 IPR036412 VM_01815 VM_01815 IPR037512 VM_01815 VM_01820 IPR002305 Aminoacyl-tRNA synthetase, class Ic VM_01820 IPR002306 Tryptophan-tRNA ligase VM_01820 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_01820 IPR024109 Tryptophan-tRNA ligase, bacterial-type VM_01830 IPR001322 Lamin Tail Domain VM_01830 IPR036415 VM_01830 VM_01830 IPR036691 VM_01830 VM_01835 IPR005839 Methylthiotransferase VM_01835 IPR005840 Ribosomal protein S12 methylthiotransferase RimO VM_01835 IPR006638 Elongator protein 3/MiaB/NifB VM_01835 IPR007197 Radical SAM VM_01835 IPR013848 Methylthiotransferase, N-terminal VM_01835 IPR020612 Methylthiotransferase, conserved site VM_01835 IPR023404 Radical SAM, alpha/beta horseshoe VM_01835 IPR038135 VM_01835 VM_01840 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain VM_01840 IPR036188 VM_01840 VM_01845 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain VM_01845 IPR017926 Glutamine amidotransferase VM_01845 IPR029062 Class I glutamine amidotransferase-like VM_01850 IPR004636 Acetylornithine/Succinylornithine transaminase family VM_01850 IPR005814 Aminotransferase class-III VM_01850 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VM_01850 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VM_01850 IPR015424 Pyridoxal phosphate-dependent transferase VM_01850 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria VM_01855 IPR007041 Arginine N-succinyltransferase Ast/AOST VM_01855 IPR016181 Acyl-CoA N-acyltransferase VM_01855 IPR017650 Arginine N-succinyltransferase AstA VM_01860 IPR015590 Aldehyde dehydrogenase domain VM_01860 IPR016160 Aldehyde dehydrogenase, cysteine active site VM_01860 IPR016161 Aldehyde/histidinol dehydrogenase VM_01860 IPR016162 Aldehyde dehydrogenase, N-terminal VM_01860 IPR016163 Aldehyde dehydrogenase, C-terminal VM_01860 IPR017649 Succinylglutamic semialdehyde dehydrogenase VM_01860 IPR029510 Aldehyde dehydrogenase, glutamic acid active site VM_01865 IPR009770 Domain of unknown function DUF1338 VM_01870 IPR000595 Cyclic nucleotide-binding domain VM_01870 IPR012318 Helix-turn-helix motif, Crp-type VM_01870 IPR014710 RmlC-like jelly roll fold VM_01870 IPR018335 Transcription regulator HTH, Crp-type, conserved site VM_01870 IPR018488 Cyclic nucleotide-binding, conserved site VM_01870 IPR018490 Cyclic nucleotide-binding-like VM_01870 IPR036388 VM_01870 VM_01870 IPR036390 VM_01870 VM_01875 IPR006082 Phosphoribulokinase VM_01875 IPR006083 Phosphoribulokinase/uridine kinase VM_01875 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_01880 IPR010648 Uncharacterised protein family UPF0270 VM_01880 IPR036685 VM_01880 VM_01885 IPR000073 Alpha/beta hydrolase fold-1 VM_01885 IPR012020 AB-hydrolase YheT, putative VM_01885 IPR029058 Alpha/Beta hydrolase fold VM_01890 IPR012659 Conserved hypothetical protein CHP02444 VM_01895 IPR003439 ABC transporter-like VM_01895 IPR003593 AAA+ ATPase domain VM_01895 IPR017871 ABC transporter, conserved site VM_01895 IPR018464 Centromere protein O VM_01895 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_01895 IPR032781 VM_01895 VM_01900 IPR003680 Flavodoxin-like fold VM_01900 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG VM_01900 IPR029039 Flavoprotein-like VM_01905 IPR003148 Regulator of K+ conductance, N-terminal VM_01905 IPR004771 K+/H+ exchanger VM_01905 IPR006036 Potassium uptake protein TrkA VM_01905 IPR006153 Cation/H+ exchanger VM_01905 IPR020884 Glutathione-regulated potassium-efflux system protein KefB VM_01905 IPR036291 VM_01905 VM_01905 IPR038770 VM_01905 VM_01910 IPR012658 Conserved hypothetical protein CHP02443 VM_01915 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain VM_01920 IPR000246 Peptidase T2, asparaginase 2 VM_01920 IPR029055 Nucleophile aminohydrolases, N-terminal VM_01925 IPR001114 Adenylosuccinate synthetase VM_01925 IPR018220 Adenylosuccinate synthase, active site VM_01925 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_01925 IPR033128 VM_01925 VM_01930 IPR006597 Sel1-like VM_01930 IPR011990 Tetratricopeptide-like helical domain VM_01935 IPR000917 Sulfatase VM_01935 IPR012159 Membrane sulfatase, HI0842-related VM_01935 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha VM_01935 IPR017850 Alkaline-phosphatase-like, core domain VM_01935 IPR024588 Membrane sulfatase, HI0842-related, N-terminal domain VM_01940 IPR001900 VM_01940 VM_01940 IPR003029 Ribosomal protein S1, RNA-binding domain VM_01940 IPR004476 Ribonuclease II/ribonuclease R VM_01940 IPR011129 Cold shock protein VM_01940 IPR011805 Ribonuclease R VM_01940 IPR012340 Nucleic acid-binding, OB-fold VM_01940 IPR013223 Ribonuclease B, N-terminal OB domain VM_01940 IPR013668 Ribonuclease R winged-helix domain VM_01940 IPR022966 Ribonuclease II/R, conserved site VM_01940 IPR022967 RNA-binding domain, S1 VM_01945 IPR001537 tRNA/rRNA methyltransferase, SpoU type VM_01945 IPR004441 RNA methyltransferase TrmH family VM_01945 IPR013123 RNA 2-O ribose methyltransferase, substrate binding VM_01945 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB VM_01945 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VM_01945 IPR029028 Alpha/beta knot methyltransferases VM_01945 IPR029064 50S ribosomal protein L30e-like VM_01950 IPR001848 Ribosomal protein S10 VM_01950 IPR018268 Ribosomal protein S10, conserved site VM_01950 IPR027486 Ribosomal protein S10 domain VM_01950 IPR036838 VM_01950 VM_01955 IPR000597 Ribosomal protein L3 VM_01955 IPR009000 Translation protein, beta-barrel domain VM_01955 IPR019926 Ribosomal protein L3, conserved site VM_01955 IPR019927 Ribosomal protein L3, bacterial/organelle-type VM_01960 IPR002136 Ribosomal protein L4/L1e VM_01960 IPR013005 Ribosomal protein L4/L1e, bacterial-type VM_01960 IPR023574 Ribosomal protein L4 domain VM_01965 IPR001014 Ribosomal protein L23/L25, conserved site VM_01965 IPR012677 Nucleotide-binding, alpha-beta plait VM_01965 IPR012678 Ribosomal protein L23/L15e core domain VM_01965 IPR013025 Ribosomal protein L25/L23 VM_01970 IPR002171 Ribosomal protein L2 VM_01970 IPR005880 Ribosomal protein L2, bacterial/organellar-type VM_01970 IPR008991 Translation protein SH3-like domain VM_01970 IPR012340 Nucleic acid-binding, OB-fold VM_01970 IPR014722 Ribosomal protein L2 domain 2 VM_01970 IPR014726 Ribosomal protein L2, domain 3 VM_01970 IPR022666 Ribosomal Proteins L2, RNA binding domain VM_01970 IPR022669 Ribosomal protein L2, C-terminal VM_01970 IPR022671 Ribosomal protein L2, conserved site VM_01975 IPR002222 Ribosomal protein S19/S15 VM_01975 IPR005732 Ribosomal protein S19, bacterial-type VM_01975 IPR020934 Ribosomal protein S19 conserved site VM_01975 IPR023575 Ribosomal protein S19, superfamily VM_01980 IPR001063 Ribosomal protein L22/L17 VM_01980 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type VM_01980 IPR018260 Ribosomal protein L22/L17, conserved site VM_01980 IPR036394 VM_01980 VM_01985 IPR001351 Ribosomal protein S3, C-terminal VM_01985 IPR004044 K Homology domain, type 2 VM_01985 IPR004087 K Homology domain VM_01985 IPR005704 Ribosomal protein S3, bacterial VM_01985 IPR009019 K homology domain, prokaryotic type VM_01985 IPR015946 K homology domain-like, alpha/beta VM_01985 IPR018280 Ribosomal protein S3, conserved site VM_01985 IPR036419 VM_01985 VM_01990 IPR000114 Ribosomal protein L16 VM_01990 IPR016180 Ribosomal protein L10e/L16 VM_01990 IPR020798 Ribosomal protein L16, conserved site VM_01990 IPR036920 VM_01990 VM_01995 IPR001854 Ribosomal protein L29 VM_01995 IPR018254 Ribosomal protein L29, conserved site VM_01995 IPR036049 VM_01995 VM_02000 IPR000266 Ribosomal protein S17 VM_02000 IPR012340 Nucleic acid-binding, OB-fold VM_02000 IPR019979 Ribosomal protein S17, conserved site VM_02000 IPR019984 Ribosomal protein S17, bacterial-type VM_02005 IPR000218 Ribosomal protein L14b/L23e VM_02005 IPR005745 Ribosomal protein L14, bacterial-type VM_02005 IPR019972 Ribosomal protein L14 conserved site VM_02005 IPR036853 VM_02005 VM_02010 IPR003256 Ribosomal protein L24 VM_02010 IPR005824 KOW VM_02010 IPR005825 Ribosomal protein L24/L26, conserved site VM_02010 IPR008991 Translation protein SH3-like domain VM_02010 IPR014722 Ribosomal protein L2 domain 2 VM_02015 IPR002132 Ribosomal protein L5 VM_02015 IPR020929 Ribosomal protein L5, conserved site VM_02015 IPR020930 Ribosomal protein L5, bacterial-type VM_02015 IPR022803 Ribosomal protein L5 domain VM_02015 IPR031309 VM_02015 VM_02015 IPR031310 VM_02015 VM_02020 IPR001209 Ribosomal protein S14 VM_02020 IPR018271 Ribosomal protein S14, conserved site VM_02020 IPR023036 Ribosomal protein S14, bacterial/plastid VM_02025 IPR000630 Ribosomal protein S8 VM_02025 IPR035987 VM_02025 VM_02030 IPR000702 Ribosomal protein L6 VM_02030 IPR002358 Ribosomal protein L6, conserved site VM_02030 IPR019906 Ribosomal protein L6, bacterial-type VM_02030 IPR020040 Ribosomal protein L6, alpha-beta domain VM_02030 IPR036789 VM_02030 VM_02035 IPR004389 Ribosomal protein L18, bacterial-type VM_02035 IPR005484 Ribosomal protein L18/L5 VM_02040 IPR005324 Ribosomal protein S5, C-terminal VM_02040 IPR005712 Ribosomal protein S5, bacterial-type VM_02040 IPR013810 Ribosomal protein S5, N-terminal VM_02040 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VM_02040 IPR018192 Ribosomal protein S5, N-terminal, conserved site VM_02040 IPR020568 Ribosomal protein S5 domain 2-type fold VM_02045 IPR005996 Ribosomal protein L30, bacterial-type VM_02045 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain VM_02045 IPR018038 Ribosomal protein L30, conserved site VM_02045 IPR036919 VM_02045 VM_02050 IPR001196 Ribosomal protein L15, conserved site VM_02050 IPR005749 Ribosomal protein L15, bacterial-type VM_02050 IPR021131 Ribosomal protein L18e/L15P VM_02050 IPR030878 VM_02050 VM_02050 IPR036227 VM_02050 VM_02055 IPR002208 SecY/SEC61-alpha family VM_02055 IPR023201 SecY subunit domain VM_02055 IPR026593 Protein translocase subunit SecY VM_02055 IPR030659 VM_02055 VM_02060 IPR000473 Ribosomal protein L36 VM_02060 IPR035977 VM_02060 VM_02065 IPR001892 Ribosomal protein S13 VM_02065 IPR010979 Ribosomal protein S13-like, H2TH VM_02065 IPR018269 Ribosomal protein S13, conserved site VM_02065 IPR019980 Ribosomal protein S13, bacterial-type VM_02065 IPR027437 30s ribosomal protein S13, C-terminal VM_02070 IPR001971 Ribosomal protein S11 VM_02070 IPR018102 Ribosomal S11, conserved site VM_02070 IPR019981 Ribosomal protein S11, bacterial-type VM_02070 IPR036967 VM_02070 VM_02075 IPR001912 Ribosomal protein S4/S9, N-terminal VM_02075 IPR002942 RNA-binding S4 domain VM_02075 IPR005709 Ribosomal protein S4, bacterial-type VM_02075 IPR018079 Ribosomal protein S4, conserved site VM_02075 IPR036986 VM_02075 VM_02080 IPR011260 RNA polymerase, alpha subunit, C-terminal VM_02080 IPR011262 DNA-directed RNA polymerase, insert domain VM_02080 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type VM_02080 IPR011773 DNA-directed RNA polymerase, alpha subunit VM_02080 IPR036603 VM_02080 VM_02080 IPR036643 VM_02080 VM_02085 IPR000456 Ribosomal protein L17 VM_02085 IPR036373 VM_02085 VM_02090 IPR021302 Protein of unknown function DUF2780, VcgC/VcgE VM_02095 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal VM_02095 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain VM_02095 IPR036944 VM_02095 VM_02100 IPR007340 Opacity-associated protein A VM_02100 IPR013731 Opacity-associated protein A, N-terminal VM_02105 IPR000620 Drug/metabolite transporter VM_02110 IPR000182 GNAT domain VM_02110 IPR016181 Acyl-CoA N-acyltransferase VM_02115 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site VM_02115 IPR001650 Helicase, C-terminal VM_02115 IPR005580 DbpA, RNA-binding VM_02115 IPR011545 DEAD/DEAH box helicase domain VM_02115 IPR012677 Nucleotide-binding, alpha-beta plait VM_02115 IPR014001 Helicase, superfamily 1/2, ATP-binding domain VM_02115 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_02120 IPR014710 RmlC-like jelly roll fold VM_02120 IPR018490 Cyclic nucleotide-binding-like VM_02130 IPR000878 Tetrapyrrole methylase VM_02130 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site VM_02130 IPR006366 Uroporphyrin-III C-methyltransferase VM_02130 IPR014776 Tetrapyrrole methylase, subdomain 2 VM_02130 IPR014777 Tetrapyrrole methylase, subdomain 1 VM_02130 IPR035996 VM_02130 VM_02135 IPR002500 Phosphoadenosine phosphosulphate reductase VM_02135 IPR011784 Sulphate adenylyltransferase, small subunit VM_02135 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_02140 IPR000795 Elongation factor, GTP-binding domain VM_02140 IPR005225 Small GTP-binding protein domain VM_02140 IPR009000 Translation protein, beta-barrel domain VM_02140 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VM_02140 IPR011779 Sulphate adenylyltransferase, large subunit VM_02140 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_02140 IPR031157 VM_02140 VM_02145 IPR002891 Adenylylsulphate kinase VM_02145 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_02150 IPR021254 Protein of unknown function DUF2806 VM_02155 IPR021727 Protein of unknown function DUF3299 VM_02160 IPR003838 Permease FtsX-like VM_02160 IPR025857 MacB-like periplasmic core domain VM_02165 IPR003439 ABC transporter-like VM_02165 IPR003593 AAA+ ATPase domain VM_02165 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_02170 IPR021253 Protein of unknown function DUF2796 VM_02175 IPR019731 Protein of unknown function DUF2607 VM_02180 IPR006513 Conserved hypothetical protein CHP01626, YtfJ VM_02185 IPR002569 Peptide methionine sulphoxide reductase MsrA VM_02185 IPR036509 VM_02185 VM_02190 IPR000184 Bacterial surface antigen (D15) VM_02190 IPR035243 VM_02190 VM_02195 IPR007452 Protein of unknown function DUF490 VM_02200 IPR009288 AIG2-like VM_02200 IPR036568 VM_02200 VM_02205 IPR021242 Protein of unknown function DUF2799 VM_02210 IPR008162 Inorganic pyrophosphatase VM_02210 IPR036649 VM_02210 VM_02215 IPR000146 Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase VM_02215 IPR020548 Fructose-1,6-bisphosphatase, active site VM_02215 IPR028343 Fructose-1,6-bisphosphatase VM_02215 IPR033391 VM_02215 VM_02225 IPR000713 Mur ligase, N-terminal VM_02225 IPR004101 Mur ligase, C-terminal VM_02225 IPR005757 Murein peptide ligase VM_02225 IPR013221 Mur ligase, central VM_02225 IPR036565 VM_02225 VM_02225 IPR036615 VM_02225 VM_02230 IPR003382 Flavoprotein VM_02230 IPR004507 Decarboxylase UbiX/Pad1 VM_02230 IPR036551 VM_02230 VM_02240 IPR005948 Thiamine ABC transporter periplasmic binding protein VM_02240 IPR005967 Proteobacterial thiamine ABC transporter, periplasmic binding protein VM_02245 IPR000515 MetI-like domain VM_02245 IPR005947 Thiamine ABC transporter, permease protein VM_02245 IPR035906 VM_02245 VM_02250 IPR003439 ABC transporter-like VM_02250 IPR003593 AAA+ ATPase domain VM_02250 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ VM_02250 IPR017871 ABC transporter, conserved site VM_02250 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_02255 IPR006839 Ribosome-associated, YjgA VM_02255 IPR023153 PSPTO4464-like domain VM_02260 IPR002510 TldD/PmbA VM_02260 IPR035068 VM_02260 VM_02260 IPR036059 VM_02260 VM_02265 IPR000644 CBS domain VM_02265 IPR006667 SLC41 divalent cation transporters, integral membrane domain VM_02265 IPR006668 Magnesium transporter, MgtE intracellular domain VM_02265 IPR006669 Magnesium transporter MgtE VM_02265 IPR036739 VM_02265 VM_02265 IPR038048 VM_02265 VM_02265 IPR038076 VM_02265 VM_02270 IPR000032 Phosphocarrier HPr protein-like VM_02270 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site VM_02270 IPR002114 Phosphotransferase system, HPr serine phosphorylation site VM_02270 IPR035895 VM_02270 VM_02275 IPR005337 ATPase, P-loop-containing VM_02275 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_02280 IPR002178 PTS EIIA type-2 domain VM_02280 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN VM_02280 IPR016152 Phosphotransferase/anion transporter VM_02285 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein VM_02285 IPR036567 VM_02285 VM_02290 IPR000394 RNA polymerase sigma factor 54 VM_02290 IPR007046 RNA polymerase sigma factor 54, core-binding VM_02290 IPR007634 RNA polymerase sigma factor 54, DNA-binding VM_02290 IPR038709 VM_02290 VM_02295 IPR003439 ABC transporter-like VM_02295 IPR003593 AAA+ ATPase domain VM_02295 IPR017871 ABC transporter, conserved site VM_02295 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_02295 IPR030921 VM_02295 VM_02295 IPR032823 VM_02295 VM_02300 IPR005653 Organic solvent tolerance-like, N-terminal VM_02300 IPR014340 Lipopolysaccharide assembly, LptA VM_02305 IPR010664 Lipopolysaccharide assembly, LptC-related VM_02305 IPR026265 Lipopolysaccharide export system protein LptC VM_02310 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase VM_02310 IPR023214 HAD-like domain VM_02310 IPR036412 VM_02310 VM_02315 IPR000644 CBS domain VM_02315 IPR001347 Sugar isomerase (SIS) VM_02315 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type VM_02320 IPR004481 Sodium/potassium/calcium exchanger VM_02320 IPR004837 Sodium/calcium exchanger membrane region VM_02330 IPR003439 ABC transporter-like VM_02330 IPR003593 AAA+ ATPase domain VM_02330 IPR017871 ABC transporter, conserved site VM_02330 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_02335 IPR003453 Permease domain VM_02335 IPR030802 VM_02335 VM_02340 IPR003399 Mammalian cell entry-related VM_02340 IPR030970 VM_02340 VM_02345 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC VM_02350 IPR002645 STAS domain VM_02350 IPR036513 VM_02350 VM_02355 IPR002634 BolA protein VM_02355 IPR036065 VM_02355 VM_02360 IPR001986 Enolpyruvate transferase domain VM_02360 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase VM_02360 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta VM_02360 IPR036968 VM_02360 VM_02365 IPR002123 Phospholipid/glycerol acyltransferase VM_02365 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase VM_02370 IPR006056 Enamine/imine deaminase YjgF-like VM_02370 IPR006175 YjgF/Yer057p/UK114 family VM_02370 IPR019897 YjgF-like protein, conserved site VM_02370 IPR035959 VM_02370 VM_02375 IPR002801 Aspartate transcarbamylase regulatory subunit VM_02375 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal VM_02375 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal VM_02375 IPR036792 VM_02375 VM_02375 IPR036793 VM_02375 VM_02380 IPR002082 Aspartate carbamoyltransferase VM_02380 IPR006130 Aspartate/ornithine carbamoyltransferase VM_02380 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain VM_02380 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding VM_02380 IPR036901 VM_02380 VM_02385 IPR002292 Ornithine/putrescine carbamoyltransferase VM_02385 IPR006130 Aspartate/ornithine carbamoyltransferase VM_02385 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain VM_02385 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding VM_02385 IPR024904 Ornithine carbamoyltransferase VM_02385 IPR036901 VM_02385 VM_02390 IPR002716 PIN domain VM_02390 IPR003714 PhoH-like protein VM_02390 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_02390 IPR029060 PIN domain-like VM_02400 IPR000330 SNF2-related VM_02400 IPR001650 Helicase, C-terminal VM_02400 IPR014001 Helicase, superfamily 1/2, ATP-binding domain VM_02400 IPR022737 RNA polymerase recycling, bacterial, C-terminal VM_02400 IPR023949 RNA polymerase-associated protein RapA VM_02400 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_02400 IPR038718 VM_02400 VM_02405 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F VM_02405 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site VM_02405 IPR020103 Pseudouridine synthase, catalytic domain VM_02410 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VM_02410 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain VM_02410 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VM_02410 IPR036291 VM_02410 VM_02415 IPR010295 Protein of unknown function DUF898 VM_02420 IPR001915 Peptidase M48 VM_02425 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site VM_02425 IPR002300 Aminoacyl-tRNA synthetase, class Ia VM_02425 IPR002303 Valine-tRNA ligase VM_02425 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain VM_02425 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding VM_02425 IPR010978 tRNA-binding arm VM_02425 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding VM_02425 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_02425 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm VM_02425 IPR037118 VM_02425 VM_02430 IPR007459 DNA polymerase III chi subunit, HolC VM_02430 IPR036768 VM_02430 VM_02435 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal VM_02435 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal VM_02435 IPR011356 Leucine aminopeptidase/peptidase B VM_02435 IPR023042 Peptidase M17, leucine aminopeptidase VM_02440 IPR005495 Permease YjgP/YjgQ, predicted VM_02440 IPR030922 VM_02440 VM_02445 IPR005495 Permease YjgP/YjgQ, predicted VM_02445 IPR030923 VM_02445 VM_02450 IPR010432 RDD VM_02460 IPR003607 HD/PDEase domain VM_02460 IPR006674 HD domain VM_02460 IPR006675 Uncharacterised domain HDIG VM_02460 IPR021812 Protein of unknown function DUF3391 VM_02495 IPR006869 Domain of unknown function DUF547 VM_02500 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel VM_02500 IPR004431 3-isopropylmalate dehydratase, small subunit VM_02500 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VM_02505 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha VM_02505 IPR004430 3-isopropylmalate dehydratase, large subunit VM_02505 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 VM_02505 IPR018136 Aconitase family, 4Fe-4S cluster binding site VM_02505 IPR036008 VM_02505 VM_02510 IPR004429 Isopropylmalate dehydrogenase VM_02510 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site VM_02510 IPR024084 Isopropylmalate dehydrogenase-like domain VM_02515 IPR000891 Pyruvate carboxyltransferase VM_02515 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site VM_02515 IPR005671 2-isopropylmalate synthase, bacterial-type VM_02515 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain VM_02515 IPR013785 Aldolase-type TIM barrel VM_02515 IPR036230 VM_02515 VM_02520 IPR001647 DNA-binding HTH domain, TetR-type VM_02520 IPR009057 Homeodomain-like VM_02520 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal VM_02520 IPR036271 VM_02520 VM_02525 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VM_02525 IPR036938 VM_02525 VM_02530 IPR005262 Conserved hypothetical protein CHP00661 VM_02535 IPR000847 Transcription regulator HTH, LysR VM_02535 IPR005119 LysR, substrate-binding VM_02535 IPR036388 VM_02535 VM_02535 IPR036390 VM_02535 VM_02540 IPR000873 AMP-dependent synthetase/ligase VM_02540 IPR020845 AMP-binding, conserved site VM_02545 IPR000399 TPP-binding enzyme, conserved site VM_02545 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding VM_02545 IPR012000 Thiamine pyrophosphate enzyme, central domain VM_02545 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain VM_02545 IPR012846 Acetolactate synthase, large subunit, biosynthetic VM_02545 IPR029035 DHS-like NAD/FAD-binding domain VM_02545 IPR029061 Thiamin diphosphate-binding fold VM_02550 IPR004789 Acetolactate synthase, small subunit VM_02550 IPR019455 Acetolactate synthase, small subunit, C-terminal VM_02550 IPR027271 VM_02550 VM_02555 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VM_02555 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain VM_02555 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 VM_02555 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VM_02555 IPR036291 VM_02555 VM_02560 IPR004788 Ribose 5-phosphate isomerase, type A VM_02560 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup VM_02560 IPR037171 VM_02560 VM_02565 IPR002698 5-formyltetrahydrofolate cyclo-ligase VM_02565 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain VM_02565 IPR037171 VM_02565 VM_02575 IPR007838 Cell division protein ZapA-like VM_02575 IPR036192 VM_02575 VM_02580 IPR011978 Uncharacterised protein family UPF0149 VM_02580 IPR036255 VM_02580 VM_02585 IPR002938 Monooxygenase, FAD-binding VM_02585 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 VM_02585 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase VM_02585 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site VM_02585 IPR036188 VM_02585 VM_02590 IPR002938 Monooxygenase, FAD-binding VM_02590 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 VM_02590 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site VM_02590 IPR036188 VM_02590 VM_02595 IPR009491 Protein of unknown function DUF1107 VM_02600 IPR006222 Glycine cleavage T-protein, N-terminal VM_02600 IPR017703 YgfZ/GcvT conserved site VM_02600 IPR023758 tRNA-modifying protein YgfZ VM_02600 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA VM_02600 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain VM_02605 IPR005631 Flavinator of succinate dehydrogenase VM_02605 IPR036714 VM_02605 VM_02615 IPR003953 FAD binding domain VM_02615 IPR005288 L-aspartate oxidase VM_02615 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal VM_02615 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain VM_02615 IPR036188 VM_02615 VM_02615 IPR037099 VM_02615 VM_02625 IPR007627 RNA polymerase sigma-70 region 2 VM_02625 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 VM_02625 IPR013324 RNA polymerase sigma factor, region 3/4 VM_02625 IPR013325 RNA polymerase sigma factor, region 2 VM_02625 IPR014284 RNA polymerase sigma-70 like domain VM_02625 IPR014286 RNA polymerase sigma-70 RpoE type VM_02625 IPR036388 VM_02625 VM_02630 IPR005572 Anti sigma-E protein RseA, N-terminal VM_02630 IPR005573 Anti sigma-E protein RseA, C-terminal VM_02630 IPR026279 Sigma-E factor negative regulatory protein RseA VM_02630 IPR036147 VM_02630 VM_02635 IPR005588 MucB/RseB VM_02635 IPR033434 VM_02635 VM_02635 IPR033436 VM_02635 VM_02635 IPR038484 VM_02635 VM_02640 IPR026268 Protein RseC VM_02645 IPR000640 Translation elongation factor EFG, V domain VM_02645 IPR000795 Elongation factor, GTP-binding domain VM_02645 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 VM_02645 IPR005225 Small GTP-binding protein domain VM_02645 IPR006297 Elongation factor 4 VM_02645 IPR009000 Translation protein, beta-barrel domain VM_02645 IPR013842 GTP-binding protein LepA, C-terminal VM_02645 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_02645 IPR031157 VM_02645 VM_02645 IPR035647 VM_02645 VM_02645 IPR038363 VM_02645 VM_02650 IPR000223 Peptidase S26A, signal peptidase I VM_02650 IPR015927 Peptidase S24/S26A/S26B/S26C VM_02650 IPR019533 Peptidase S26 VM_02650 IPR019756 Peptidase S26A, signal peptidase I, serine active site VM_02650 IPR019757 Peptidase S26A, signal peptidase I, lysine active site VM_02650 IPR019758 Peptidase S26A, signal peptidase I, conserved site VM_02650 IPR036286 VM_02650 VM_02655 IPR000999 Ribonuclease III domain VM_02655 IPR011907 Ribonuclease III VM_02655 IPR014720 Double-stranded RNA-binding domain VM_02655 IPR036389 VM_02655 VM_02660 IPR004044 K Homology domain, type 2 VM_02660 IPR005225 Small GTP-binding protein domain VM_02660 IPR005662 GTP-binding protein Era VM_02660 IPR006073 GTP binding domain VM_02660 IPR009019 K homology domain, prokaryotic type VM_02660 IPR015946 K homology domain-like, alpha/beta VM_02660 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_02665 IPR003717 Recombination protein O, RecO VM_02665 IPR012340 Nucleic acid-binding, OB-fold VM_02665 IPR022572 DNA replication/recombination mediator RecO, N-terminal VM_02665 IPR037278 VM_02665 VM_02670 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ VM_02670 IPR013785 Aldolase-type TIM barrel VM_02670 IPR036130 VM_02670 VM_02675 IPR002582 Holo-[acyl carrier protein] synthase VM_02675 IPR004568 Phosphopantethiene-protein transferase domain VM_02675 IPR008278 4'-phosphopantetheinyl transferase superfamily VM_02675 IPR037143 VM_02675 VM_02695 IPR001789 Signal transduction response regulator, receiver domain VM_02695 IPR003594 Histidine kinase-like ATPase, C-terminal domain VM_02695 IPR003660 HAMP linker domain VM_02695 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain VM_02695 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_02695 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain VM_02695 IPR011006 CheY-like superfamily VM_02695 IPR019247 Histidine kinase BarA, N-terminal VM_02695 IPR036097 VM_02695 VM_02695 IPR036641 VM_02695 VM_02695 IPR036890 VM_02695 VM_02700 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD VM_02700 IPR002792 TRAM domain VM_02700 IPR010280 (Uracil-5)-methyltransferase family VM_02700 IPR012340 Nucleic acid-binding, OB-fold VM_02700 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VM_02700 IPR030390 VM_02700 VM_02700 IPR030391 VM_02700 VM_02705 IPR002912 ACT domain VM_02705 IPR003607 HD/PDEase domain VM_02705 IPR004095 TGS VM_02705 IPR004811 RelA/SpoT family VM_02705 IPR007685 RelA/SpoT VM_02705 IPR012675 Beta-grasp domain VM_02705 IPR012676 TGS-like VM_02710 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core VM_02710 IPR011551 NTP pyrophosphohydrolase MazG, bacterial VM_02720 IPR004468 CTP synthase VM_02720 IPR017456 CTP synthase, N-terminal VM_02720 IPR017926 Glutamine amidotransferase VM_02720 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_02720 IPR029062 Class I glutamine amidotransferase-like VM_02725 IPR000941 Enolase VM_02725 IPR020809 Enolase, conserved site VM_02725 IPR020810 Enolase, C-terminal VM_02725 IPR020811 Enolase, N-terminal VM_02725 IPR029017 Enolase N-terminal domain-like VM_02725 IPR036849 VM_02725 VM_02730 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase VM_02730 IPR029056 Ribokinase-like VM_02735 IPR013059 Tryptophan/tyrosine transporter VM_02735 IPR013061 Tryptophan/tryrosine permease, conserved site VM_02735 IPR018227 Tryptophan/tyrosine permease VM_02740 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase VM_02740 IPR011166 Beta-eliminating lyase family VM_02740 IPR013441 Tyrosine phenol-lyase VM_02740 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VM_02740 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VM_02740 IPR015424 Pyridoxal phosphate-dependent transferase VM_02745 IPR002646 Poly A polymerase, head domain VM_02745 IPR006674 HD domain VM_02745 IPR012006 tRNA nucleotidyltransferase, proteobacteria VM_02745 IPR032828 VM_02745 VM_02750 IPR002477 Peptidoglycan binding-like VM_02750 IPR003593 AAA+ ATPase domain VM_02750 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_02750 IPR036365 VM_02750 VM_02750 IPR036366 VM_02750 VM_02755 IPR032389 VM_02755 VM_02760 IPR003646 SH3-like domain, bacterial-type VM_02760 IPR016476 SH3 domain protein VM_02765 IPR001204 Phosphate transporter VM_02770 IPR002727 Protein of unknown function DUF47 VM_02770 IPR018445 Putitive phosphate transport regulator VM_02770 IPR038078 VM_02770 VM_02775 IPR007899 CHAD VM_02775 IPR023577 CYTH-like domain VM_02775 IPR033469 VM_02775 VM_02775 IPR038186 VM_02775 VM_02780 IPR005821 Ion transport domain VM_02780 IPR028325 Voltage-gated potassium channel VM_02785 IPR003660 HAMP linker domain VM_02785 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_02785 IPR004090 Chemotaxis methyl-accepting receptor VM_02790 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain VM_02790 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase VM_02790 IPR023057 Glutamate-ammonia-ligase adenylyltransferase VM_02795 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site VM_02795 IPR004821 Cytidyltransferase-like domain VM_02795 IPR011611 Carbohydrate kinase PfkB VM_02795 IPR011913 RfaE bifunctional protein, domain I VM_02795 IPR011914 RfaE bifunctional protein, domain II VM_02795 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_02795 IPR023030 Bifunctional protein HldE VM_02795 IPR029056 Ribokinase-like VM_02800 IPR003423 Outer membrane efflux protein VM_02800 IPR010130 Type I secretion outer membrane protein, TolC VM_02805 IPR000086 NUDIX hydrolase domain VM_02805 IPR004385 Nucleoside diphosphate pyrophosphatase VM_02805 IPR015797 NUDIX hydrolase domain-like VM_02805 IPR020084 NUDIX hydrolase, conserved site VM_02810 IPR009659 Protein of unknown function DUF1249 VM_02815 IPR004843 Calcineurin-like phosphoesterase domain, apaH type VM_02815 IPR013622 Calcineurin-like phosphoesterase C-terminal VM_02815 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA VM_02815 IPR029052 Metallo-dependent phosphatase-like VM_02820 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA VM_02820 IPR029058 Alpha/Beta hydrolase fold VM_02825 IPR001241 DNA topoisomerase, type IIA VM_02825 IPR002288 DNA gyrase B subunit, C-terminal VM_02825 IPR003594 Histidine kinase-like ATPase, C-terminal domain VM_02825 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative VM_02825 IPR006171 Toprim domain VM_02825 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 VM_02825 IPR013759 DNA topoisomerase, type IIA, central domain VM_02825 IPR013760 DNA topoisomerase, type IIA-like domain VM_02825 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VM_02825 IPR018522 DNA topoisomerase, type IIA, conserved site VM_02825 IPR020568 Ribosomal protein S5 domain 2-type fold VM_02825 IPR036890 VM_02825 VM_02830 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal VM_02830 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative VM_02830 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel VM_02830 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain VM_02830 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta VM_02830 IPR013760 DNA topoisomerase, type IIA-like domain VM_02830 IPR035516 VM_02830 VM_02835 IPR005584 DNA gyrase inhibitor YacG VM_02835 IPR013088 Zinc finger, NHR/GATA-type VM_02840 IPR009777 Cell division protein ZapD VM_02840 IPR027462 Z ring-associated protein D, C-terminal domain VM_02840 IPR036268 VM_02840 VM_02845 IPR001977 Dephospho-CoA kinase VM_02845 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_02850 IPR000045 Prepilin type IV endopeptidase, peptidase domain VM_02850 IPR010627 Peptidase A24A, N-terminal VM_02850 IPR014032 Peptidase A24A, prepilin type IV, bacterial VM_02855 IPR001992 Type II secretion system conserved site VM_02855 IPR003004 GspF/PilC family VM_02855 IPR018076 Type II secretion system F domain VM_02860 IPR001482 Type II secretion system protein E VM_02860 IPR007831 General secretory system II, protein E, N-terminal VM_02860 IPR013374 ATPase, type IV, pilus assembly, PilB VM_02860 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_02860 IPR037257 VM_02860 VM_02865 IPR000983 Bacterial general secretion pathway protein G-type pilin VM_02865 IPR001082 Fimbrial protein pilin VM_02865 IPR012902 Prokaryotic N-terminal methylation site VM_02870 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal VM_02870 IPR004393 Nicotinate-nucleotide pyrophosphorylase VM_02870 IPR013785 Aldolase-type TIM barrel VM_02870 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal VM_02870 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD VM_02870 IPR036068 VM_02870 VM_02870 IPR037128 VM_02870 VM_02875 IPR002502 N-acetylmuramoyl-L-alanine amidase domain VM_02875 IPR036505 VM_02875 VM_02880 IPR001226 Flavodoxin, conserved site VM_02880 IPR008254 Flavodoxin/nitric oxide synthase VM_02880 IPR010086 Flavodoxin, long chain VM_02880 IPR029039 Flavoprotein-like VM_02885 IPR002104 Integrase, catalytic VM_02885 IPR004107 Integrase, SAM-like, N-terminal VM_02885 IPR010998 Integrase, Lambda-type, N-terminal VM_02885 IPR011010 DNA breaking-rejoining enzyme, catalytic core VM_02885 IPR011932 Tyrosine recombinase XerD VM_02885 IPR013762 Integrase-like, catalytic core VM_02885 IPR023009 Tyrosine recombinase XerC/XerD VM_02890 IPR009094 Disulphide bond isomerase, DsbC, N-terminal VM_02890 IPR012336 Thioredoxin-like fold VM_02890 IPR017937 Thioredoxin, conserved site VM_02890 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal VM_02890 IPR036249 VM_02890 VM_02895 IPR001667 DDH domain VM_02895 IPR003156 DHHA1 domain VM_02895 IPR004610 Bacterial RecJ exonuclease VM_02895 IPR038763 VM_02895 VM_02900 IPR001667 DDH domain VM_02900 IPR004097 DHHA2 domain VM_02900 IPR038222 VM_02900 VM_02900 IPR038763 VM_02900 VM_02905 IPR004843 Calcineurin-like phosphoesterase domain, apaH type VM_02905 IPR006146 5'-Nucleotidase, conserved site VM_02905 IPR006179 5'-Nucleotidase/apyrase VM_02905 IPR008334 5'-Nucleotidase, C-terminal VM_02905 IPR029052 Metallo-dependent phosphatase-like VM_02905 IPR036907 VM_02905 VM_02910 IPR000524 Transcription regulator HTH, GntR VM_02910 IPR008920 Transcription regulator FadR/GntR, C-terminal VM_02910 IPR011711 GntR, C-terminal VM_02910 IPR036388 VM_02910 VM_02910 IPR036390 VM_02910 VM_02915 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type VM_02915 IPR005474 Transketolase, N-terminal VM_02915 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II VM_02915 IPR029061 Thiamin diphosphate-binding fold VM_02920 IPR000089 Biotin/lipoyl attachment VM_02920 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain VM_02920 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site VM_02920 IPR004167 E3 binding VM_02920 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex VM_02920 IPR011053 Single hybrid motif VM_02920 IPR023213 Chloramphenicol acetyltransferase-like domain VM_02920 IPR036625 VM_02920 VM_02925 IPR001100 VM_02925 VM_02925 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VM_02925 IPR006258 Dihydrolipoamide dehydrogenase VM_02925 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site VM_02925 IPR016156 FAD/NAD-linked reductase, dimerisation domain VM_02925 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain VM_02925 IPR036188 VM_02925 VM_02935 IPR002903 Ribosomal RNA small subunit methyltransferase H VM_02935 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain VM_02935 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VM_02940 IPR011922 Cell division protein FtsL VM_02945 IPR001460 Penicillin-binding protein, transpeptidase VM_02945 IPR005311 Penicillin-binding protein, dimerisation domain VM_02945 IPR012338 Beta-lactamase/transpeptidase-like VM_02945 IPR036138 VM_02945 VM_02945 IPR037532 VM_02945 VM_02950 IPR000713 Mur ligase, N-terminal VM_02950 IPR004101 Mur ligase, C-terminal VM_02950 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase VM_02950 IPR013221 Mur ligase, central VM_02950 IPR035911 VM_02950 VM_02950 IPR036565 VM_02950 VM_02950 IPR036615 VM_02950 VM_02955 IPR000713 Mur ligase, N-terminal VM_02955 IPR004101 Mur ligase, C-terminal VM_02955 IPR005863 UDP-MurNAc-pentapeptide synthetase VM_02955 IPR013221 Mur ligase, central VM_02955 IPR035911 VM_02955 VM_02955 IPR036565 VM_02955 VM_02955 IPR036615 VM_02955 VM_02960 IPR000715 Glycosyl transferase, family 4 VM_02960 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase VM_02960 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site VM_02965 IPR004101 Mur ligase, C-terminal VM_02965 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase VM_02965 IPR013221 Mur ligase, central VM_02965 IPR036565 VM_02965 VM_02965 IPR036615 VM_02965 VM_02970 IPR001182 Cell cycle protein FtsW/RodA VM_02970 IPR013437 Cell division protein FtsW VM_02970 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site VM_02975 IPR004276 Glycosyl transferase, family 28 VM_02975 IPR006009 N-acetylglucosaminyltransferase, MurG VM_02975 IPR007235 Glycosyl transferase, family 28, C-terminal VM_02980 IPR000713 Mur ligase, N-terminal VM_02980 IPR004101 Mur ligase, C-terminal VM_02980 IPR005758 UDP-N-acetylmuramate-alanine ligase VM_02980 IPR013221 Mur ligase, central VM_02980 IPR036565 VM_02980 VM_02980 IPR036615 VM_02980 VM_02985 IPR005548 Cell division protein FtsQ/DivIB VM_02985 IPR013685 Polypeptide-transport-associated, FtsQ-type VM_02985 IPR026579 Cell division protein FtsQ VM_02990 IPR003494 SHS2 domain inserted in FtsA VM_02990 IPR020823 Cell division protein FtsA VM_02995 IPR000158 Cell division protein FtsZ VM_02995 IPR003008 Tubulin/FtsZ, GTPase domain VM_02995 IPR008280 Tubulin/FtsZ, C-terminal VM_02995 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain VM_02995 IPR020805 Cell division protein FtsZ, conserved site VM_02995 IPR024757 Cell division protein FtsZ, C-terminal VM_02995 IPR036525 VM_02995 VM_02995 IPR037103 VM_02995 VM_03000 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase VM_03000 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal VM_03000 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal VM_03000 IPR020568 Ribosomal protein S5 domain 2-type fold VM_03005 IPR007922 Protein of unknown function DUF721/UPF0232 VM_03010 IPR000185 Protein translocase subunit SecA VM_03010 IPR004027 SEC-C motif VM_03010 IPR011115 SecA DEAD-like, N-terminal VM_03010 IPR011116 SecA Wing/Scaffold VM_03010 IPR011130 SecA preprotein, cross-linking domain VM_03010 IPR020937 SecA conserved site VM_03010 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_03010 IPR036266 VM_03010 VM_03010 IPR036670 VM_03010 VM_03015 IPR000086 NUDIX hydrolase domain VM_03015 IPR003561 Mutator MutT VM_03015 IPR015797 NUDIX hydrolase domain-like VM_03015 IPR020084 NUDIX hydrolase, conserved site VM_03015 IPR020476 NUDIX hydrolase VM_03020 IPR000846 Dihydrodipicolinate reductase, N-terminal VM_03020 IPR022663 Dihydrodipicolinate reductase, C-terminal VM_03020 IPR022664 Dihydrodipicolinate reductase, conserved site VM_03020 IPR023940 Dihydrodipicolinate reductase, bacterial VM_03020 IPR036291 VM_03020 VM_03025 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain VM_03025 IPR006274 Carbamoyl-phosphate synthase, small subunit VM_03025 IPR017926 Glutamine amidotransferase VM_03025 IPR029062 Class I glutamine amidotransferase-like VM_03025 IPR036480 VM_03025 VM_03030 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain VM_03030 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain VM_03030 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain VM_03030 IPR006275 Carbamoyl-phosphate synthase, large subunit VM_03030 IPR011607 Methylglyoxal synthase-like domain VM_03030 IPR016185 Pre-ATP-grasp domain VM_03030 IPR036897 VM_03030 VM_03030 IPR036914 VM_03030 VM_03035 IPR002781 Transmembrane protein TauE like VM_03040 IPR000847 Transcription regulator HTH, LysR VM_03040 IPR005119 LysR, substrate-binding VM_03040 IPR036388 VM_03040 VM_03040 IPR036390 VM_03040 VM_03045 IPR005115 Uncharacterised domain UPF0126 VM_03050 IPR002491 ABC transporter periplasmic binding domain VM_03050 IPR023544 ABC transporter, vitamin B12-binding protein VM_03055 IPR004485 Cobalamin biosynthesis CobD/CbiB VM_03060 IPR000845 Nucleoside phosphorylase domain VM_03060 IPR010049 MTA/SAH nucleosidase VM_03060 IPR035994 VM_03060 VM_03065 IPR010865 Protein of unknown function DUF1499 VM_03070 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 VM_03070 IPR009051 Alpha-helical ferredoxin VM_03070 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain VM_03070 IPR028261 Dihydroprymidine dehydrogenase domain II VM_03070 IPR036188 VM_03070 VM_03075 IPR002489 Glutamate synthase, alpha subunit, C-terminal VM_03075 IPR002932 Glutamate synthase domain VM_03075 IPR006982 Glutamate synthase, central-N VM_03075 IPR013785 Aldolase-type TIM barrel VM_03075 IPR017932 Glutamine amidotransferase type 2 domain VM_03075 IPR029055 Nucleophile aminohydrolases, N-terminal VM_03075 IPR036485 VM_03075 VM_03080 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 VM_03080 IPR009051 Alpha-helical ferredoxin VM_03080 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain VM_03080 IPR028261 Dihydroprymidine dehydrogenase domain II VM_03080 IPR036188 VM_03080 VM_03085 IPR002489 Glutamate synthase, alpha subunit, C-terminal VM_03085 IPR002932 Glutamate synthase domain VM_03085 IPR006982 Glutamate synthase, central-N VM_03085 IPR013785 Aldolase-type TIM barrel VM_03085 IPR017932 Glutamine amidotransferase type 2 domain VM_03085 IPR029055 Nucleophile aminohydrolases, N-terminal VM_03085 IPR036485 VM_03085 VM_03090 IPR005911 Conserved hypothetical protein CHP01212 VM_03090 IPR006638 Elongator protein 3/MiaB/NifB VM_03090 IPR007197 Radical SAM VM_03090 IPR023404 Radical SAM, alpha/beta horseshoe VM_03090 IPR032432 VM_03090 VM_03095 IPR000014 PAS domain VM_03095 IPR000160 GGDEF domain VM_03095 IPR001610 PAC motif VM_03095 IPR013656 PAS fold-4 VM_03095 IPR029787 Nucleotide cyclase VM_03095 IPR035965 VM_03095 VM_03100 IPR000014 PAS domain VM_03100 IPR001789 Signal transduction response regulator, receiver domain VM_03100 IPR003594 Histidine kinase-like ATPase, C-terminal domain VM_03100 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain VM_03100 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_03100 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain VM_03100 IPR011006 CheY-like superfamily VM_03100 IPR013767 PAS fold VM_03100 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB VM_03100 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain VM_03100 IPR035965 VM_03100 VM_03100 IPR036097 VM_03100 VM_03100 IPR036641 VM_03100 VM_03100 IPR036890 VM_03100 VM_03105 IPR001789 Signal transduction response regulator, receiver domain VM_03105 IPR001867 Signal transduction response regulator, C-terminal VM_03105 IPR011006 CheY-like superfamily VM_03105 IPR016032 Signal transduction response regulator, C-terminal effector VM_03105 IPR036388 VM_03105 VM_03110 IPR021710 Protein of unknown function DUF3293 VM_03115 IPR005493 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase VM_03115 IPR010203 Regulator of ribonuclease activity A VM_03115 IPR036704 VM_03115 VM_03120 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel VM_03120 IPR016895 Uncharacterised conserved protein UCP028680 VM_03125 IPR001048 Aspartate/glutamate/uridylate kinase VM_03125 IPR001341 Aspartate kinase domain VM_03125 IPR001342 Homoserine dehydrogenase, catalytic VM_03125 IPR002912 ACT domain VM_03125 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding VM_03125 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I VM_03125 IPR018042 Aspartate kinase, conserved site VM_03125 IPR019811 Homoserine dehydrogenase, conserved site VM_03125 IPR027795 GATS-like ACT domain VM_03125 IPR036291 VM_03125 VM_03125 IPR036393 VM_03125 VM_03130 IPR000870 Homoserine kinase VM_03130 IPR006203 GHMP kinase, ATP-binding, conserved site VM_03130 IPR006204 GHMP kinase N-terminal domain VM_03130 IPR013750 GHMP kinase, C-terminal domain VM_03130 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VM_03130 IPR020568 Ribosomal protein S5 domain 2-type fold VM_03130 IPR036554 VM_03130 VM_03135 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site VM_03135 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VM_03135 IPR004450 Threonine synthase-like VM_03135 IPR029144 Threonine synthase, N-terminal VM_03135 IPR036052 VM_03135 VM_03135 IPR037158 VM_03135 VM_03140 IPR001150 Glycine radical domain VM_03140 IPR011140 Autonomous glycyl radical cofactor GrcA VM_03140 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VM_03145 IPR001719 AP endonuclease 2 VM_03145 IPR013022 Xylose isomerase-like, TIM barrel domain VM_03145 IPR018246 AP endonuclease 2, zinc binding site VM_03145 IPR036237 VM_03145 VM_03150 IPR002043 Uracil-DNA glycosylase VM_03150 IPR005122 Uracil-DNA glycosylase-like VM_03150 IPR018085 Uracil-DNA glycosylase, active site VM_03150 IPR036895 VM_03150 VM_03155 IPR012312 Haemerythrin/HHE cation-binding motif VM_03160 IPR001584 Integrase, catalytic core VM_03160 IPR009057 Homeodomain-like VM_03160 IPR012337 Ribonuclease H-like domain VM_03160 IPR036397 VM_03160 VM_03165 IPR021932 Protein of unknown function DUF3545 VM_03170 IPR001463 Sodium:alanine symporter VM_03175 IPR005583 Uncharacterised protein family UPF0246 VM_03180 IPR001130 TatD family VM_03180 IPR018228 Deoxyribonuclease, TatD-related, conserved site VM_03180 IPR032466 VM_03180 VM_03185 IPR002668 Concentrative nucleoside transporter N-terminal domain VM_03185 IPR011642 Nucleoside recognition Gate VM_03185 IPR011657 Concentrative nucleoside transporter C-terminal domain VM_03185 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial VM_03195 IPR002915 DeoC/FbaB/ lacD aldolase VM_03195 IPR011343 Deoxyribose-phosphate aldolase VM_03195 IPR013785 Aldolase-type TIM barrel VM_03195 IPR023649 Deoxyribose-phosphate aldolase type II VM_03200 IPR000053 Pyrimidine-nucleoside phosphorylase VM_03200 IPR000312 Glycosyl transferase, family 3 VM_03200 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal VM_03200 IPR013465 Thymidine phosphorylase VM_03200 IPR017459 Glycosyl transferase family 3, N-terminal domain VM_03200 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site VM_03200 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic VM_03200 IPR035902 VM_03200 VM_03200 IPR036320 VM_03200 VM_03200 IPR036566 VM_03200 VM_03205 IPR006124 Metalloenzyme VM_03205 IPR010045 Phosphopentomutase VM_03205 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha VM_03205 IPR017850 Alkaline-phosphatase-like, core domain VM_03205 IPR024052 Phosphopentomutase DeoB cap domain VM_03210 IPR000845 Nucleoside phosphorylase domain VM_03210 IPR004402 Purine nucleoside phosphorylase DeoD-type VM_03210 IPR018016 Nucleoside phosphorylase, conserved site VM_03210 IPR035994 VM_03210 VM_03215 IPR019305 Uncharacterised protein family Smp VM_03220 IPR023190 Phosphoserine phosphatase, domain 2 VM_03220 IPR023214 HAD-like domain VM_03220 IPR036412 VM_03220 VM_03225 IPR009875 PilZ domain VM_03230 IPR003593 AAA+ ATPase domain VM_03230 IPR004504 DNA repair protein RadA VM_03230 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VM_03230 IPR020568 Ribosomal protein S5 domain 2-type fold VM_03230 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_03235 IPR000640 Translation elongation factor EFG, V domain VM_03235 IPR000795 Elongation factor, GTP-binding domain VM_03235 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 VM_03235 IPR004540 Translation elongation factor EFG/EF2 VM_03235 IPR005225 Small GTP-binding protein domain VM_03235 IPR005517 Translation elongation factor EFG/EF2, domain IV VM_03235 IPR009000 Translation protein, beta-barrel domain VM_03235 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VM_03235 IPR020568 Ribosomal protein S5 domain 2-type fold VM_03235 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_03235 IPR031157 VM_03235 VM_03235 IPR035647 VM_03235 VM_03240 IPR000847 Transcription regulator HTH, LysR VM_03240 IPR005119 LysR, substrate-binding VM_03240 IPR036388 VM_03240 VM_03240 IPR036390 VM_03240 VM_03250 IPR000873 AMP-dependent synthetase/ligase VM_03250 IPR020845 AMP-binding, conserved site VM_03255 IPR029016 GAF domain-like VM_03260 IPR003370 Chromate transporter VM_03260 IPR014047 Chromate transporter, long chain VM_03265 IPR004199 Beta galactosidase small chain/ domain 5 VM_03265 IPR006101 Glycoside hydrolase, family 2 VM_03265 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich VM_03265 IPR006103 Glycoside hydrolase, family 2, TIM barrel VM_03265 IPR006104 Glycosyl hydrolases family 2, sugar binding domain VM_03265 IPR008979 Galactose-binding domain-like VM_03265 IPR011013 Galactose mutarotase-like domain VM_03265 IPR013783 Immunoglobulin-like fold VM_03265 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup VM_03265 IPR017853 Glycoside hydrolase, superfamily VM_03265 IPR023230 Glycoside hydrolase, family 2, conserved site VM_03265 IPR023232 Glycoside hydrolase, family 2, active site VM_03265 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase VM_03265 IPR032312 VM_03265 VM_03265 IPR036156 VM_03265 VM_03270 IPR000843 Transcription regulator HTH, LacI VM_03270 IPR010982 Lambda repressor-like, DNA-binding domain VM_03270 IPR028082 Periplasmic binding protein-like I VM_03275 IPR002547 tRNA-binding domain VM_03275 IPR012340 Nucleic acid-binding, OB-fold VM_03280 IPR009288 AIG2-like VM_03280 IPR036568 VM_03280 VM_03285 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB VM_03290 IPR013651 ATP-grasp fold, RimK-type VM_03290 IPR013815 ATP-grasp fold, subdomain 1 VM_03290 IPR025839 RimK-like ATPgrasp N-terminal domain VM_03295 IPR000182 GNAT domain VM_03295 IPR016181 Acyl-CoA N-acyltransferase VM_03295 IPR021770 Protein of unknown function DUF3335 VM_03300 IPR010266 NnrS VM_03305 IPR001451 Bacterial transferase hexapeptide repeat VM_03305 IPR011004 Trimeric LpxA-like VM_03305 IPR019876 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, gammaproteobacteria VM_03305 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family VM_03305 IPR032784 VM_03305 VM_03305 IPR038361 VM_03305 VM_03315 IPR009813 Uncharacterised protein family YebG VM_03315 IPR038627 VM_03315 VM_03320 IPR000847 Transcription regulator HTH, LysR VM_03320 IPR005119 LysR, substrate-binding VM_03320 IPR036388 VM_03320 VM_03320 IPR036390 VM_03320 VM_03325 IPR004695 Voltage-dependent anion channel VM_03325 IPR038665 VM_03325 VM_03330 IPR006697 Exodeoxyribonuclease V, gamma subunit VM_03330 IPR011335 Restriction endonuclease type II-like VM_03330 IPR013986 DExx box DNA helicase domain VM_03330 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_03335 IPR004586 Exodeoxyribonuclease V, beta subunit VM_03335 IPR011335 Restriction endonuclease type II-like VM_03335 IPR011604 Exonuclease, phage-type/RecB, C-terminal VM_03335 IPR014017 DNA helicase, UvrD-like, C-terminal VM_03335 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_03335 IPR034739 VM_03335 VM_03335 IPR038726 VM_03335 VM_03340 IPR006344 Exodeoxyribonuclease V, alpha subunit VM_03340 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_03340 IPR027785 UvrD-like helicase C-terminal domain VM_03355 IPR001048 Aspartate/glutamate/uridylate kinase VM_03355 IPR010167 Amino-acid N-acetyltransferase (ArgA) VM_03355 IPR016181 Acyl-CoA N-acyltransferase VM_03355 IPR036393 VM_03355 VM_03360 IPR021271 Protein of unknown function DUF2850 VM_03365 IPR005300 Lytic transglycosylase MltA VM_03365 IPR010611 3D domain VM_03365 IPR036908 VM_03365 VM_03370 IPR000594 UBA/THIF-type NAD/FAD binding fold VM_03370 IPR035985 VM_03370 VM_03375 IPR003808 Fe-S metabolism associated domain, SufE-like VM_03375 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE VM_03380 IPR000192 Aminotransferase class V domain VM_03380 IPR010970 Cysteine desulfurase, SufS VM_03380 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VM_03380 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VM_03380 IPR015424 Pyridoxal phosphate-dependent transferase VM_03380 IPR016454 Cysteine desulfurase, NifS VM_03380 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA VM_03385 IPR002818 ThiJ/PfpI VM_03385 IPR006287 DJ-1 VM_03385 IPR029062 Class I glutamine amidotransferase-like VM_03390 IPR003710 Ketopantoate reductase ApbA/PanE VM_03390 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like VM_03390 IPR013328 Dehydrogenase, multihelical VM_03390 IPR013332 Ketopantoate reductase, N-terminal domain VM_03390 IPR013752 Ketopantoate reductase, C-terminal domain VM_03390 IPR036291 VM_03390 VM_03395 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like VM_03395 IPR036777 VM_03395 VM_03400 IPR003111 Peptidase S16, lon N-terminal VM_03400 IPR015947 PUA-like domain VM_03405 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site VM_03405 IPR007627 RNA polymerase sigma-70 region 2 VM_03405 IPR007630 RNA polymerase sigma-70 region 4 VM_03405 IPR013324 RNA polymerase sigma factor, region 3/4 VM_03405 IPR013325 RNA polymerase sigma factor, region 2 VM_03405 IPR014284 RNA polymerase sigma-70 like domain VM_03405 IPR036388 VM_03405 VM_03410 IPR011051 RmlC-like cupin domain VM_03410 IPR012807 Anti-sigma factor ChrR, putative VM_03410 IPR014710 RmlC-like jelly roll fold VM_03410 IPR025979 ChrR-like cupin domain VM_03410 IPR027383 Putative zinc-finger VM_03415 IPR011701 Major facilitator superfamily VM_03415 IPR036259 VM_03415 VM_03420 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain VM_03420 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site VM_03420 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase VM_03420 IPR029000 Cyclophilin-like domain VM_03425 IPR005619 Uncharacterised protein family, YajG VM_03430 IPR002052 DNA methylase, N-6 adenine-specific, conserved site VM_03430 IPR007848 Methyltransferase small domain VM_03430 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD VM_03430 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VM_03435 IPR002634 BolA protein VM_03435 IPR036065 VM_03435 VM_03440 IPR008703 NADH-quinone reductase, Na(+)-translocating, subunit A VM_03440 IPR022615 NADH-quinone reductase, Na(+)-translocating, subunit A, C-terminal VM_03445 IPR004338 NADH-quinone reductase NQR2/RnfD VM_03445 IPR010966 NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit VM_03450 IPR007329 FMN-binding VM_03450 IPR010204 NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit VM_03455 IPR003667 Electron transport complex, Rnf/Nqr VM_03455 IPR011292 NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit VM_03460 IPR003667 Electron transport complex, Rnf/Nqr VM_03460 IPR010967 NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit VM_03465 IPR001041 2Fe-2S ferredoxin-type domain VM_03465 IPR001433 Oxidoreductase FAD/NAD(P)-binding VM_03465 IPR008333 Oxidoreductase, FAD-binding domain VM_03465 IPR010205 NADH-quinone reductase, Na(+)-translocating, F subunit VM_03465 IPR012675 Beta-grasp domain VM_03465 IPR017938 Riboflavin synthase-like beta-barrel VM_03465 IPR036010 VM_03465 VM_03465 IPR039261 VM_03465 VM_03475 IPR003374 ApbE-like domain VM_03475 IPR024932 Flavin transferase ApbE VM_03480 IPR007495 Protein of unknown function DUF539 VM_03485 IPR001126 DNA-repair protein, UmuC-like VM_03485 IPR017961 DNA polymerase, Y-family, little finger domain VM_03485 IPR022880 DNA polymerase IV VM_03485 IPR024728 DNA polymerase type-Y, HhH motif VM_03485 IPR036775 VM_03485 VM_03490 IPR021307 Protein of unknown function DUF2884 VM_03500 IPR000175 Sodium:neurotransmitter symporter VM_03500 IPR037272 VM_03500 VM_03505 IPR007036 Succinylglutamate desuccinylase/aspartoacylase VM_03510 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX VM_03510 IPR013651 ATP-grasp fold, RimK-type VM_03510 IPR013815 ATP-grasp fold, subdomain 1 VM_03510 IPR023533 Ribosomal S6 modification enzyme RimK VM_03515 IPR021109 Aspartic peptidase domain VM_03520 IPR001160 Peptidase M20C, Xaa-His dipeptidase VM_03520 IPR002933 Peptidase M20 VM_03520 IPR011650 Peptidase M20, dimerisation domain VM_03525 IPR006043 Xanthine/uracil/vitamin C permease VM_03525 IPR026033 Purine permease PbuG-like VM_03530 IPR000836 Phosphoribosyltransferase domain VM_03530 IPR023747 Xanthine-guanine phosphoribosyltransferase VM_03530 IPR029057 Phosphoribosyltransferase-like VM_03535 IPR010520 Protein of unknown function DUF1100, hydrolase-like VM_03535 IPR029058 Alpha/Beta hydrolase fold VM_03540 IPR009986 Sigma factor-binding protein Crl VM_03540 IPR038208 VM_03540 VM_03545 IPR001048 Aspartate/glutamate/uridylate kinase VM_03545 IPR001057 Glutamate/acetylglutamate kinase VM_03545 IPR002478 PUA domain VM_03545 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase VM_03545 IPR011529 Glutamate 5-kinase VM_03545 IPR015947 PUA-like domain VM_03545 IPR019797 Glutamate 5-kinase, conserved site VM_03545 IPR036393 VM_03545 VM_03545 IPR036974 VM_03545 VM_03550 IPR000965 Gamma-glutamyl phosphate reductase GPR VM_03550 IPR012134 Glutamate-5-semialdehyde dehydrogenase VM_03550 IPR015590 Aldehyde dehydrogenase domain VM_03550 IPR016161 Aldehyde/histidinol dehydrogenase VM_03550 IPR016162 Aldehyde dehydrogenase, N-terminal VM_03550 IPR016163 Aldehyde dehydrogenase, C-terminal VM_03550 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site VM_03555 IPR003796 Ribonucleotide reductase regulator NrdR-like VM_03555 IPR005144 ATP-cone VM_03560 IPR002125 CMP/dCMP deaminase, zinc-binding VM_03560 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal VM_03560 IPR004794 Riboflavin biosynthesis protein RibD VM_03560 IPR011549 Riboflavin-specific deaminase, C-terminal VM_03560 IPR016192 APOBEC/CMP deaminase, zinc-binding VM_03560 IPR016193 Cytidine deaminase-like VM_03560 IPR024072 Dihydrofolate reductase-like domain VM_03565 IPR001783 Lumazine-binding protein VM_03565 IPR017938 Riboflavin synthase-like beta-barrel VM_03565 IPR023366 ATP synthase subunit alpha-like domain VM_03565 IPR026017 Lumazine-binding domain VM_03570 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB VM_03570 IPR017945 DHBP synthase RibB-like alpha/beta domain VM_03570 IPR032677 VM_03570 VM_03570 IPR036144 VM_03570 VM_03575 IPR002180 6,7-dimethyl-8-ribityllumazine synthase VM_03575 IPR034964 VM_03575 VM_03575 IPR036467 VM_03575 VM_03580 IPR006027 NusB/RsmB/TIM44 VM_03580 IPR011605 NusB antitermination factor VM_03580 IPR035926 VM_03580 VM_03585 IPR006283 Thiamine-monophosphate kinase VM_03585 IPR010918 AIR synthase-related protein, C-terminal domain VM_03585 IPR016188 PurM, N-terminal-like VM_03585 IPR036676 VM_03585 VM_03585 IPR036921 VM_03585 VM_03590 IPR007686 YutG/PgpA domain VM_03590 IPR026037 Phosphatidylglycerophosphatase A VM_03590 IPR036681 VM_03590 VM_03595 IPR020911 Uncharacterised protein family UPF0325 VM_03600 IPR002934 Nucleotidyl transferase domain VM_03600 IPR003607 HD/PDEase domain VM_03600 IPR006674 HD domain VM_03600 IPR010043 Protein-PII uridylyltransferase VM_03600 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase VM_03605 IPR000994 Peptidase M24, structural domain VM_03605 IPR001714 Peptidase M24, methionine aminopeptidase VM_03605 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 VM_03605 IPR036005 VM_03605 VM_03610 IPR001865 Ribosomal protein S2 VM_03610 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid VM_03610 IPR018130 Ribosomal protein S2, conserved site VM_03610 IPR023591 Ribosomal protein S2, flavodoxin-like domain VM_03615 IPR001816 Translation elongation factor EFTs/EF1B VM_03615 IPR009060 UBA-like VM_03615 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation VM_03615 IPR018101 Translation elongation factor Ts, conserved site VM_03615 IPR036402 VM_03615 VM_03620 IPR001048 Aspartate/glutamate/uridylate kinase VM_03620 IPR011817 Uridylate kinase VM_03620 IPR015963 Uridylate kinase, bacteria VM_03620 IPR036393 VM_03620 VM_03625 IPR002661 Ribosome recycling factor VM_03625 IPR023584 Ribosome recycling factor domain VM_03625 IPR036191 VM_03625 VM_03630 IPR001441 Decaprenyl diphosphate synthase-like VM_03630 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site VM_03630 IPR036424 VM_03630 VM_03635 IPR000374 Phosphatidate cytidylyltransferase VM_03640 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase VM_03640 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal VM_03640 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal VM_03640 IPR026877 DXP reductoisomerase C-terminal domain VM_03640 IPR036169 VM_03640 VM_03640 IPR036291 VM_03640 VM_03645 IPR001478 PDZ domain VM_03645 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase VM_03645 IPR008915 Peptidase M50 VM_03645 IPR036034 VM_03645 VM_03650 IPR000184 Bacterial surface antigen (D15) VM_03650 IPR010827 Surface antigen variable number VM_03650 IPR023707 Outer membrane protein assembly factor BamA VM_03655 IPR005632 Chaperone protein Skp VM_03655 IPR024930 Skp domain VM_03660 IPR001451 Bacterial transferase hexapeptide repeat VM_03660 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase VM_03660 IPR011004 Trimeric LpxA-like VM_03660 IPR018357 Hexapeptide transferase, conserved site VM_03660 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region VM_03665 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ VM_03665 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ VM_03665 IPR029069 HotDog domain VM_03670 IPR001451 Bacterial transferase hexapeptide repeat VM_03670 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase VM_03670 IPR011004 Trimeric LpxA-like VM_03670 IPR018357 Hexapeptide transferase, conserved site VM_03670 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal VM_03670 IPR037157 VM_03670 VM_03675 IPR003835 Glycosyl transferase, family 19 VM_03680 IPR012337 Ribonuclease H-like domain VM_03680 IPR022898 Ribonuclease HII VM_03680 IPR024567 Ribonuclease HII/HIII domain VM_03680 IPR036397 VM_03680 VM_03685 IPR003141 Polymerase/histidinol phosphatase, N-terminal VM_03685 IPR004013 PHP, C-terminal VM_03685 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type VM_03685 IPR004805 DNA polymerase III, alpha subunit VM_03685 IPR011708 Bacterial DNA polymerase III, alpha subunit VM_03685 IPR016195 Polymerase/histidinol phosphatase-like VM_03685 IPR029460 DNA polymerase, helix-hairpin-helix motif VM_03690 IPR001095 Acetyl-CoA carboxylase, alpha subunit VM_03690 IPR029045 ClpP/crotonase-like domain VM_03695 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase VM_03695 IPR012094 Lysidine-tRNA(Ile) synthetase VM_03695 IPR012795 Lysidine-tRNA(Ile) synthetase, N-terminal VM_03695 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal VM_03695 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_03695 IPR015262 Lysidine-tRNA(Ile) synthetase, substrate-binding domain VM_03700 IPR009056 Cytochrome c-like domain VM_03700 IPR036909 VM_03700 VM_03705 IPR002187 Nitrogen regulatory protein PII VM_03705 IPR002332 Nitrogen regulatory protein P-II, urydylation site VM_03705 IPR011322 Nitrogen regulatory PII-like, alpha/beta VM_03705 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VM_03705 IPR017918 Nitrogen regulatory protein PII, conserved site VM_03710 IPR005135 Endonuclease/exonuclease/phosphatase VM_03710 IPR022958 Uncharacterised protein family UPF0294 VM_03710 IPR036691 VM_03710 VM_03715 IPR000189 Prokaryotic transglycosylase, active site VM_03715 IPR008258 Lytic transglycosylase-like SLT domain VM_03715 IPR018392 LysM domain VM_03715 IPR023346 Lysozyme-like domain VM_03715 IPR036779 VM_03715 VM_03720 IPR001279 Beta-lactamase-like VM_03720 IPR017782 Hydroxyacylglutathione hydrolase VM_03720 IPR032282 VM_03720 VM_03720 IPR036866 VM_03720 VM_03725 IPR013216 Methyltransferase type 11 VM_03725 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VM_03730 IPR002156 Ribonuclease H domain VM_03730 IPR012337 Ribonuclease H-like domain VM_03730 IPR022892 Ribonuclease H VM_03730 IPR036397 VM_03730 VM_03735 IPR006054 DNA polymerase III, epsilon subunit VM_03735 IPR006309 DNA polymerase 3, epsilon subunit VM_03735 IPR012337 Ribonuclease H-like domain VM_03735 IPR013520 Exonuclease, RNase T/DNA polymerase III VM_03735 IPR036397 VM_03735 VM_03740 IPR020010 Conserved hypothetical protein CHP03503 VM_03745 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal VM_03745 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain VM_03745 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal VM_03745 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type VM_03745 IPR036250 VM_03745 VM_03745 IPR037069 VM_03745 VM_03750 IPR001347 Sugar isomerase (SIS) VM_03750 IPR004515 Phosphoheptose isomerase VM_03755 IPR026869 Putative glutamine amidotransferase type 2 VM_03755 IPR029055 Nucleophile aminohydrolases, N-terminal VM_03760 IPR001555 Phosphoribosylglycinamide formyltransferase, active site VM_03760 IPR002376 Formyl transferase, N-terminal VM_03760 IPR004607 Phosphoribosylglycinamide formyltransferase VM_03760 IPR036477 VM_03760 VM_03765 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase VM_03765 IPR010918 AIR synthase-related protein, C-terminal domain VM_03765 IPR016188 PurM, N-terminal-like VM_03765 IPR036676 VM_03765 VM_03765 IPR036921 VM_03765 VM_03770 IPR005765 Uracil phosphoribosyl transferase VM_03770 IPR029057 Phosphoribosyltransferase-like VM_03770 IPR034332 VM_03770 VM_03775 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F VM_03775 IPR002942 RNA-binding S4 domain VM_03775 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F VM_03775 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site VM_03775 IPR020103 Pseudouridine synthase, catalytic domain VM_03775 IPR036986 VM_03775 VM_03780 IPR002625 Smr protein/MutS2 C-terminal VM_03780 IPR036063 VM_03780 VM_03785 IPR021494 Protein of unknown function DUF3149 VM_03795 IPR002816 Pheromone shutdown, TraB VM_03800 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain VM_03800 IPR004867 Chitobiase/beta-hexosaminidase C-terminal domain VM_03800 IPR008965 Carbohydrate-binding domain VM_03800 IPR012291 Cellulose-binding family II/chitobiase, carbohydrate-binding domain VM_03800 IPR013783 Immunoglobulin-like fold VM_03800 IPR014756 Immunoglobulin E-set VM_03800 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal VM_03800 IPR015883 Glycoside hydrolase family 20, catalytic core VM_03800 IPR017853 Glycoside hydrolase, superfamily VM_03800 IPR025705 Beta-hexosaminidase VM_03800 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like VM_03805 IPR007332 Protein of unknown function DUF411 VM_03810 IPR001757 Cation-transporting P-type ATPase VM_03810 IPR006121 Heavy metal-associated domain, HMA VM_03810 IPR008250 P-type ATPase, A domain VM_03810 IPR017969 Heavy-metal-associated, conserved site VM_03810 IPR018303 P-type ATPase, phosphorylation site VM_03810 IPR023214 HAD-like domain VM_03810 IPR023298 P-type ATPase, transmembrane domain VM_03810 IPR023299 P-type ATPase, cytoplasmic domain N VM_03810 IPR027256 Cation-transporting P-type ATPase, subfamily IB VM_03810 IPR036163 VM_03810 VM_03810 IPR036412 VM_03810 VM_03815 IPR000924 Glutamyl/glutaminyl-tRNA synthetase VM_03815 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site VM_03815 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial VM_03815 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding VM_03815 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_03815 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain VM_03815 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 VM_03820 IPR000498 Outer membrane protein, OmpA-like, transmembrane domain VM_03820 IPR006664 Outer membrane protein, bacterial VM_03820 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal VM_03820 IPR006690 Outer membrane protein, OmpA-like, conserved site VM_03820 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel VM_03820 IPR036737 VM_03820 VM_03835 IPR032370 VM_03835 VM_03835 IPR032386 VM_03835 VM_03835 IPR032388 VM_03835 VM_03835 IPR038165 VM_03835 VM_03835 IPR038180 VM_03835 VM_03840 IPR014549 Uncharacterised conserved integral membrane protein VM_03845 IPR007293 Protein of unknown function UCP028687 VM_03845 IPR024952 Lipoprotein LPP20-like VM_03850 IPR007809 FlgN-like domain VM_03850 IPR036679 VM_03850 VM_03855 IPR007412 Anti-sigma-28 factor, FlgM VM_03855 IPR031316 VM_03855 VM_03855 IPR035890 VM_03855 VM_03860 IPR013974 SAF domain VM_03860 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal VM_03865 IPR001789 Signal transduction response regulator, receiver domain VM_03865 IPR002545 CheW-like protein VM_03865 IPR011006 CheY-like superfamily VM_03865 IPR024181 Chemotaxis response regulator CheV VM_03865 IPR036061 VM_03865 VM_03870 IPR000780 MCP methyltransferase, CheR-type VM_03870 IPR022641 MCP methyltransferase, CheR-type, all-alpha domain, N-terminal VM_03870 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal VM_03870 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VM_03870 IPR036804 VM_03870 VM_03875 IPR006300 Flagellar basal-body rod protein FlgB VM_03880 IPR001444 Flagellar basal body rod protein, N-terminal VM_03880 IPR006299 Flagellar basal-body rod protein FlgC VM_03880 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VM_03880 IPR019776 Flagellar basal body rod protein, conserved site VM_03885 IPR005648 Flagellar hook capping protein VM_03885 IPR025963 FlgD Tudor-like domain VM_03885 IPR025965 FlgD Ig-like domain VM_03890 IPR001444 Flagellar basal body rod protein, N-terminal VM_03890 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VM_03890 IPR011491 Flagellar basal body FlaE VM_03890 IPR019776 Flagellar basal body rod protein, conserved site VM_03890 IPR020013 Fagellar hook-basal body protein, FlgE/F/G VM_03890 IPR037058 VM_03890 VM_03890 IPR037925 VM_03890 VM_03895 IPR001444 Flagellar basal body rod protein, N-terminal VM_03895 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VM_03895 IPR012836 Flagellar basal-body rod FlgF VM_03895 IPR020013 Fagellar hook-basal body protein, FlgE/F/G VM_03895 IPR037925 VM_03895 VM_03900 IPR001444 Flagellar basal body rod protein, N-terminal VM_03900 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VM_03900 IPR012834 Flagellar basal-body rod FlgG VM_03900 IPR019776 Flagellar basal body rod protein, conserved site VM_03900 IPR020013 Fagellar hook-basal body protein, FlgE/F/G VM_03900 IPR037925 VM_03900 VM_03905 IPR000527 Flagellar L-ring protein VM_03910 IPR001782 Flagellar P-ring protein VM_03915 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain VM_03915 IPR013377 Flagellar rod assembly protein/muramidase FlgJ VM_03915 IPR019301 Flagellar protein FlgJ, N-terminal VM_03920 IPR002371 Flagellar hook-associated protein, FlgK VM_03920 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VM_03925 IPR001029 Flagellin, D0/D1 domain VM_03925 IPR013384 Flagellar hook-associated protein 3 VM_03930 IPR001029 Flagellin, D0/D1 domain VM_03930 IPR001492 Flagellin VM_03930 IPR010810 Flagellin hook, IN motif VM_03935 IPR001029 Flagellin, D0/D1 domain VM_03935 IPR001492 Flagellin VM_03935 IPR010810 Flagellin hook, IN motif VM_04020 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 VM_04020 IPR006073 GTP binding domain VM_04020 IPR012675 Beta-grasp domain VM_04020 IPR012676 TGS-like VM_04020 IPR013029 Domain of unknown function DUF933 VM_04020 IPR023192 TGS-like domain VM_04020 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_04025 IPR001328 Peptidyl-tRNA hydrolase VM_04025 IPR018171 Peptidyl-tRNA hydrolase, conserved site VM_04025 IPR036416 VM_04025 VM_04030 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site VM_04030 IPR005946 Ribose-phosphate diphosphokinase VM_04030 IPR029057 Phosphoribosyltransferase-like VM_04030 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain VM_04030 IPR037515 VM_04030 VM_04035 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase VM_04035 IPR006204 GHMP kinase N-terminal domain VM_04035 IPR013750 GHMP kinase, C-terminal domain VM_04035 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VM_04035 IPR020568 Ribosomal protein S5 domain 2-type fold VM_04035 IPR036554 VM_04035 VM_04040 IPR004565 Outer membrane lipoprotein LolB VM_04040 IPR029046 Lipoprotein localisation LolA/LolB/LppX VM_04045 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase VM_04045 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase VM_04045 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal VM_04045 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain VM_04045 IPR018214 Glutamyl-tRNA reductase, conserved site VM_04045 IPR036291 VM_04045 VM_04045 IPR036343 VM_04045 VM_04045 IPR036453 VM_04045 VM_04050 IPR000352 Peptide chain release factor class I/class II VM_04050 IPR004373 Peptide chain release factor 1 VM_04050 IPR005139 Peptide chain release factor VM_04055 IPR002052 DNA methylase, N-6 adenine-specific, conserved site VM_04055 IPR004556 Modification methylase HemK VM_04055 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific VM_04055 IPR025714 Methyltransferase domain VM_04055 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VM_04060 IPR007360 Invasion gene expression up-regulator, SirB VM_04065 IPR011990 Tetratricopeptide-like helical domain VM_04065 IPR032698 VM_04065 VM_04070 IPR006218 DAHP synthetase I/KDSA VM_04070 IPR006269 3-deoxy-8-phosphooctulonate synthase VM_04070 IPR013785 Aldolase-type TIM barrel VM_04075 IPR004843 Calcineurin-like phosphoesterase domain, apaH type VM_04075 IPR006146 5'-Nucleotidase, conserved site VM_04075 IPR006179 5'-Nucleotidase/apyrase VM_04075 IPR008334 5'-Nucleotidase, C-terminal VM_04075 IPR029052 Metallo-dependent phosphatase-like VM_04075 IPR036907 VM_04075 VM_04080 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC VM_04080 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain VM_04080 IPR036754 VM_04080 VM_04085 IPR006042 Xanthine/uracil permease VM_04085 IPR006043 Xanthine/uracil/vitamin C permease VM_04090 IPR018642 Protein of unknown function DUF2066 VM_04095 IPR018643 Protein of unknown function DUF2069, membrane VM_04100 IPR001226 Flavodoxin, conserved site VM_04100 IPR005025 NADPH-dependent FMN reductase-like VM_04100 IPR029039 Flavoprotein-like VM_04105 IPR006659 Arsenate reductase VM_04105 IPR006660 Arsenate reductase-like VM_04105 IPR036249 VM_04105 VM_04110 IPR001915 Peptidase M48 VM_04110 IPR011990 Tetratricopeptide-like helical domain VM_04110 IPR019734 Tetratricopeptide repeat VM_04110 IPR030873 VM_04110 VM_04115 IPR001455 TusA-like domain VM_04115 IPR036868 VM_04115 VM_04120 IPR002549 Uncharacterised protein family UPF0118 VM_04125 IPR003660 HAMP linker domain VM_04125 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_04125 IPR029151 Periplasmic sensor domain-like VM_04125 IPR033479 VM_04125 VM_04140 IPR001789 Signal transduction response regulator, receiver domain VM_04140 IPR011006 CheY-like superfamily VM_04145 IPR011006 CheY-like superfamily VM_04150 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant VM_04150 IPR024706 Peroxiredoxin, AhpC-type VM_04150 IPR036249 VM_04150 VM_04160 IPR011010 DNA breaking-rejoining enzyme, catalytic core VM_04160 IPR013762 Integrase-like, catalytic core VM_04170 IPR002104 Integrase, catalytic VM_04170 IPR011010 DNA breaking-rejoining enzyme, catalytic core VM_04170 IPR013762 Integrase-like, catalytic core VM_04180 IPR016867 Glycine cleavage repressor GcvR VM_04185 IPR002220 DapA-like VM_04185 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA VM_04185 IPR013785 Aldolase-type TIM barrel VM_04185 IPR020624 Dihydrodipicolinate synthetase, conserved site VM_04185 IPR020625 Dihydrodipicolinate synthetase, active site VM_04190 IPR010653 Lipoprotein, NlpB VM_04190 IPR014524 Outer membrane protein assembly factor BamC VM_04195 IPR021550 Protein of unknown function DUF2897 VM_04200 IPR003709 Peptidase M15B/M15C VM_04200 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain VM_04205 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site VM_04205 IPR002933 Peptidase M20 VM_04205 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria VM_04205 IPR011650 Peptidase M20, dimerisation domain VM_04205 IPR036264 VM_04205 VM_04210 IPR006504 Transcriptional regulator Spx/MgsR VM_04210 IPR006660 Arsenate reductase-like VM_04210 IPR036249 VM_04210 VM_04215 IPR017162 Uncharacterised conserved protein UCP037266 VM_04215 IPR036388 VM_04215 VM_04220 IPR021339 Protein of unknown function DUF2956 VM_04225 IPR021318 Protein of unknown function DUF2919 VM_04230 IPR006314 Dyp-type peroxidase VM_04230 IPR011008 Dimeric alpha-beta barrel VM_04235 IPR001029 Flagellin, D0/D1 domain VM_04235 IPR001492 Flagellin VM_04235 IPR010810 Flagellin hook, IN motif VM_04240 IPR001029 Flagellin, D0/D1 domain VM_04240 IPR001492 Flagellin VM_04240 IPR010810 Flagellin hook, IN motif VM_04245 IPR001029 Flagellin, D0/D1 domain VM_04245 IPR001492 Flagellin VM_04245 IPR010810 Flagellin hook, IN motif VM_04250 IPR005186 Flagellar protein FlaG protein VM_04250 IPR035924 VM_04250 VM_04255 IPR003481 Flagellar hook-associated protein 2, N-terminal VM_04255 IPR010809 Flagellar hook-associated 2, C-terminal VM_04255 IPR010810 Flagellin hook, IN motif VM_04265 IPR003713 Flagellar protein FliS VM_04265 IPR036584 VM_04265 VM_04270 IPR002078 RNA polymerase sigma factor 54 interaction domain VM_04270 IPR002197 DNA binding HTH domain, Fis-type VM_04270 IPR003593 AAA+ ATPase domain VM_04270 IPR009057 Homeodomain-like VM_04270 IPR010518 Flagellar regulatory FleQ VM_04270 IPR011006 CheY-like superfamily VM_04270 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VM_04270 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VM_04270 IPR025944 Sigma-54 interaction domain, conserved site VM_04270 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_04275 IPR000014 PAS domain VM_04275 IPR003594 Histidine kinase-like ATPase, C-terminal domain VM_04275 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain VM_04275 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_04275 IPR035965 VM_04275 VM_04275 IPR036097 VM_04275 VM_04275 IPR036890 VM_04275 VM_04280 IPR001789 Signal transduction response regulator, receiver domain VM_04280 IPR002078 RNA polymerase sigma factor 54 interaction domain VM_04280 IPR002197 DNA binding HTH domain, Fis-type VM_04280 IPR003593 AAA+ ATPase domain VM_04280 IPR009057 Homeodomain-like VM_04280 IPR011006 CheY-like superfamily VM_04280 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VM_04280 IPR025944 Sigma-54 interaction domain, conserved site VM_04280 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_04285 IPR001624 Flagellar hook-basal body complex protein FliE VM_04290 IPR000067 Flagellar M-ring protein FliF VM_04290 IPR006182 Secretory protein YscJ/FliF VM_04290 IPR013556 Flagellar M-ring C-terminal VM_04295 IPR000090 Flagellar motor switch protein FliG VM_04295 IPR011002 Flagellar motor switch protein FliG, alpha-helical VM_04295 IPR023087 VM_04295 VM_04295 IPR028263 Flagellar motor switch protein FliG, N-terminal domain VM_04295 IPR032779 VM_04295 VM_04300 IPR000563 Flagellar assembly protein FliH VM_04300 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE VM_04305 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain VM_04305 IPR003593 AAA+ ATPase domain VM_04305 IPR005714 ATPase, type III secretion system, FliI/YscN VM_04305 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site VM_04305 IPR020005 Flagellar export ATPase FliI, clade 1 VM_04305 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_04310 IPR012823 Flagellar export FliJ VM_04315 IPR021136 Flagellar hook-length control protein-like, C-terminal VM_04315 IPR038610 VM_04315 VM_04320 IPR005503 Flagellar basal body-associated protein FliL VM_04325 IPR001543 Surface presentation of antigen (SpoA) VM_04325 IPR001689 Flagellar motor switch protein FliM VM_04325 IPR028976 CheC-like domain VM_04325 IPR036429 VM_04325 VM_04330 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb VM_04330 IPR001543 Surface presentation of antigen (SpoA) VM_04330 IPR012826 Flagellar motor switch FliN VM_04330 IPR036429 VM_04330 VM_04335 IPR022781 Flagellar biosynthesis protein, FliO VM_04340 IPR005837 Flagellar transport protein FliP VM_04340 IPR005838 Type III secretion system inner membrane P protein VM_04345 IPR002191 Bacterial export protein family 3 VM_04345 IPR006305 Flagellar biosynthesis protein FliQ VM_04350 IPR002010 Type III secretion system inner membrane R protein VM_04350 IPR006303 Flagellar biosynthesis protein FliR VM_04355 IPR006135 Type III secretion system substrate exporter VM_04355 IPR006136 Type III exporter system, flagellar biosynthetic protein FlhB VM_04355 IPR029025 Type III secretion system substrate exporter, C-terminal VM_04360 IPR002625 Smr protein/MutS2 C-terminal VM_04360 IPR022990 Uncharacterised protein family UPF0115 VM_04360 IPR036063 VM_04360 VM_04365 IPR002052 DNA methylase, N-6 adenine-specific, conserved site VM_04365 IPR004556 Modification methylase HemK VM_04365 IPR007848 Methyltransferase small domain VM_04365 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase VM_04365 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VM_04375 IPR000453 Chorismate synthase VM_04375 IPR020541 Chorismate synthase, conserved site VM_04375 IPR035904 VM_04375 VM_04380 IPR005115 Uncharacterised domain UPF0126 VM_04385 IPR007411 Protein of unknown function DUF462 VM_04390 IPR014987 Uncharacterised protein family YfcL VM_04395 IPR005025 NADPH-dependent FMN reductase-like VM_04395 IPR029039 Flavoprotein-like VM_04400 IPR006076 FAD dependent oxidoreductase VM_04400 IPR008471 MnmC-like methyltransferase VM_04400 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal VM_04400 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC VM_04400 IPR036188 VM_04400 VM_04405 IPR014030 Beta-ketoacyl synthase, N-terminal VM_04405 IPR014031 Beta-ketoacyl synthase, C-terminal VM_04405 IPR016039 Thiolase-like VM_04405 IPR018201 Beta-ketoacyl synthase, active site VM_04405 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VM_04410 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VM_04410 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain VM_04410 IPR020921 Erythronate-4-phosphate dehydrogenase VM_04410 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain VM_04410 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VM_04410 IPR036291 VM_04410 VM_04410 IPR038251 VM_04410 VM_04415 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site VM_04415 IPR000534 Semialdehyde dehydrogenase, NAD-binding VM_04415 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type VM_04415 IPR012080 Aspartate-semialdehyde dehydrogenase VM_04415 IPR012280 Semialdehyde dehydrogenase, dimerisation domain VM_04415 IPR036291 VM_04415 VM_04420 IPR002559 Transposase, IS4-like VM_04420 IPR003201 Transposase Tn5, dimerisation VM_04420 IPR012337 Ribonuclease H-like domain VM_04420 IPR014735 Transposase, Tn5-like, N-terminal VM_04420 IPR014736 Transposase, Tn5-like, core VM_04420 IPR014737 Transposase, Tn5-like, C-terminal VM_04420 IPR038215 VM_04420 VM_04425 IPR002481 Ferric-uptake regulator VM_04425 IPR036388 VM_04425 VM_04425 IPR036390 VM_04425 VM_04430 IPR027961 Protein of unknown function DUF4442 VM_04430 IPR029069 HotDog domain VM_04435 IPR000847 Transcription regulator HTH, LysR VM_04435 IPR005119 LysR, substrate-binding VM_04435 IPR036388 VM_04435 VM_04435 IPR036390 VM_04435 VM_04440 IPR005538 LrgA/CidA family VM_04445 IPR007300 CidB/LrgB family VM_04450 IPR001226 Flavodoxin, conserved site VM_04450 IPR008254 Flavodoxin/nitric oxide synthase VM_04450 IPR010086 Flavodoxin, long chain VM_04450 IPR029039 Flavoprotein-like VM_04455 IPR021249 Protein of unknown function DUF2788 VM_04460 IPR000073 Alpha/beta hydrolase fold-1 VM_04460 IPR000639 Epoxide hydrolase-like VM_04460 IPR029058 Alpha/Beta hydrolase fold VM_04465 IPR005621 Regulation modulator SeqA VM_04465 IPR010985 Ribbon-helix-helix VM_04465 IPR013321 Arc-type ribbon-helix-helix VM_04465 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain VM_04465 IPR033761 VM_04465 VM_04465 IPR036835 VM_04465 VM_04470 IPR005843 Alpha-D-phosphohexomutase, C-terminal VM_04470 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I VM_04470 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II VM_04470 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III VM_04470 IPR005852 Phosphoglucomutase, alpha-D-glucose specific VM_04470 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III VM_04470 IPR016066 Alpha-D-phosphohexomutase, conserved site VM_04470 IPR036900 VM_04470 VM_04475 IPR015003 Protein of unknown function DUF1853 VM_04480 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 VM_04480 IPR036069 VM_04480 VM_04485 IPR002020 Citrate synthase-like VM_04485 IPR010953 Citrate synthase, type I VM_04485 IPR016142 Citrate synthase-like, large alpha subdomain VM_04485 IPR016143 Citrate synthase-like, small alpha subdomain VM_04485 IPR019810 Citrate synthase active site VM_04485 IPR024176 Citrate synthase, bacterial-type VM_04485 IPR036969 VM_04485 VM_04490 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit VM_04490 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit VM_04490 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site VM_04490 IPR034804 VM_04490 VM_04495 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit VM_04495 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor VM_04495 IPR034804 VM_04495 VM_04500 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site VM_04500 IPR003953 FAD binding domain VM_04500 IPR011281 Succinate dehydrogenase, flavoprotein subunit VM_04500 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit VM_04500 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal VM_04500 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain VM_04500 IPR036188 VM_04500 VM_04500 IPR037099 VM_04500 VM_04505 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein VM_04505 IPR009051 Alpha-helical ferredoxin VM_04505 IPR012675 Beta-grasp domain VM_04505 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VM_04505 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal VM_04505 IPR036010 VM_04505 VM_04510 IPR001017 Dehydrogenase, E1 component VM_04510 IPR005475 Transketolase-like, pyrimidine-binding domain VM_04510 IPR011603 2-oxoglutarate dehydrogenase E1 component VM_04510 IPR029061 Thiamin diphosphate-binding fold VM_04510 IPR031717 VM_04510 VM_04510 IPR032106 VM_04510 VM_04515 IPR000089 Biotin/lipoyl attachment VM_04515 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain VM_04515 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site VM_04515 IPR004167 E3 binding VM_04515 IPR006255 Dihydrolipoamide succinyltransferase VM_04515 IPR011053 Single hybrid motif VM_04515 IPR023213 Chloramphenicol acetyltransferase-like domain VM_04515 IPR036625 VM_04515 VM_04520 IPR005809 Succinyl-CoA synthetase, beta subunit VM_04520 IPR005811 ATP-citrate lyase/succinyl-CoA ligase VM_04520 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type VM_04520 IPR013815 ATP-grasp fold, subdomain 1 VM_04520 IPR016102 Succinyl-CoA synthetase-like VM_04520 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site VM_04525 IPR003781 CoA-binding VM_04525 IPR005810 Succinyl-CoA ligase, alpha subunit VM_04525 IPR005811 ATP-citrate lyase/succinyl-CoA ligase VM_04525 IPR016102 Succinyl-CoA synthetase-like VM_04525 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site VM_04525 IPR033847 VM_04525 VM_04525 IPR036291 VM_04525 VM_04530 IPR001626 ABC-3 VM_04530 IPR037294 VM_04530 VM_04535 IPR003439 ABC transporter-like VM_04535 IPR003593 AAA+ ATPase domain VM_04535 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_04540 IPR006127 Periplasmic solute binding protein family VM_04540 IPR006128 Adhesion lipoprotein VM_04540 IPR006129 Adhesin B VM_04545 IPR009057 Homeodomain-like VM_04545 IPR013783 Immunoglobulin-like fold VM_04545 IPR015943 WD40/YVTN repeat-like-containing domain VM_04545 IPR018060 DNA binding HTH domain, AraC-type VM_04545 IPR018062 HTH domain AraC-type, conserved site VM_04545 IPR020449 Transcription regulator HTH, AraC- type VM_04545 IPR036890 VM_04545 VM_04550 IPR007167 Ferrous iron transporter FeoA domain VM_04550 IPR008988 Transcriptional repressor, C-terminal VM_04550 IPR038157 VM_04550 VM_04555 IPR003373 Ferrous iron transport protein B VM_04555 IPR011640 Ferrous iron transport protein B, C-terminal VM_04555 IPR011642 Nucleoside recognition Gate VM_04555 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_04555 IPR030389 VM_04555 VM_04560 IPR015102 Transcriptional regulator HTH-type, FeoC VM_04560 IPR036390 VM_04560 VM_04565 IPR002559 Transposase, IS4-like VM_04565 IPR003201 Transposase Tn5, dimerisation VM_04565 IPR012337 Ribonuclease H-like domain VM_04565 IPR014735 Transposase, Tn5-like, N-terminal VM_04565 IPR014736 Transposase, Tn5-like, core VM_04565 IPR014737 Transposase, Tn5-like, C-terminal VM_04565 IPR038215 VM_04565 VM_04570 IPR001310 Histidine triad (HIT) protein VM_04570 IPR026026 Histidine triad hydrolase, Hint-type VM_04570 IPR036265 VM_04570 VM_04575 IPR001278 Arginine-tRNA ligase VM_04575 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site VM_04575 IPR005148 Arginyl tRNA synthetase N-terminal domain VM_04575 IPR008909 DALR anticodon binding VM_04575 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding VM_04575 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_04575 IPR035684 VM_04575 VM_04575 IPR036695 VM_04575 VM_04580 IPR010393 Protein of unknown function DUF991 VM_04580 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VM_04585 IPR001431 Peptidase M16, zinc-binding site VM_04585 IPR007863 Peptidase M16, C-terminal domain VM_04585 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like VM_04585 IPR011765 Peptidase M16, N-terminal VM_04585 IPR032632 VM_04585 VM_04590 IPR004449 Phosphohistidine phosphatase SixA, subgroup VM_04590 IPR013078 Histidine phosphatase superfamily, clade-1 VM_04590 IPR029033 Histidine phosphatase superfamily VM_04595 IPR001712 Type III secretion system FHIPEP VM_04595 IPR006301 Flagellar biosynthesis protein FlhA VM_04595 IPR025505 FHIPEP conserved site VM_04600 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain VM_04600 IPR003593 AAA+ ATPase domain VM_04600 IPR020006 Signal-recognition particle (SRP)-type GTPase VM_04600 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_04605 IPR025501 ATP binding protein MinD VM_04605 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_04605 IPR033756 VM_04605 VM_04610 IPR000943 RNA polymerase sigma-70 VM_04610 IPR007624 RNA polymerase sigma-70 region 3 VM_04610 IPR007627 RNA polymerase sigma-70 region 2 VM_04610 IPR007630 RNA polymerase sigma-70 region 4 VM_04610 IPR012845 RNA polymerase sigma factor, FliA/WhiG VM_04610 IPR013324 RNA polymerase sigma factor, region 3/4 VM_04610 IPR013325 RNA polymerase sigma factor, region 2 VM_04610 IPR014284 RNA polymerase sigma-70 like domain VM_04610 IPR028617 RNA polymerase sigma factor FliA VM_04615 IPR001789 Signal transduction response regulator, receiver domain VM_04615 IPR011006 CheY-like superfamily VM_04620 IPR007439 Chemotaxis phosphatase, CheZ VM_04625 IPR002545 CheW-like protein VM_04625 IPR003594 Histidine kinase-like ATPase, C-terminal domain VM_04625 IPR004105 Histidine kinase CheA-like, homodimeric domain VM_04625 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_04625 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain VM_04625 IPR036061 VM_04625 VM_04625 IPR036097 VM_04625 VM_04625 IPR036641 VM_04625 VM_04625 IPR036890 VM_04625 VM_04625 IPR037006 VM_04625 VM_04630 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase VM_04630 IPR001789 Signal transduction response regulator, receiver domain VM_04630 IPR008248 Signal transduction response regulator, chemotaxis, CheB VM_04630 IPR011006 CheY-like superfamily VM_04630 IPR035909 VM_04630 VM_04635 IPR025669 AAA domain VM_04635 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_04640 IPR002545 CheW-like protein VM_04640 IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like VM_04640 IPR036061 VM_04640 VM_04645 IPR002545 CheW-like protein VM_04645 IPR036061 VM_04645 VM_04650 IPR021244 Protein of unknown function DUF2802 VM_04655 IPR003439 ABC transporter-like VM_04655 IPR003593 AAA+ ATPase domain VM_04655 IPR005895 ABC transporter, haem export, CcmA VM_04655 IPR017871 ABC transporter, conserved site VM_04655 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_04660 IPR003544 Cytochrome c-type biogenesis protein CcmB VM_04660 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria VM_04665 IPR002541 Cytochrome c assembly protein VM_04665 IPR003557 Cytochrome c-type biogenesis protein CcmC VM_04670 IPR007078 Haem exporter protein D (CcmD) VM_04675 IPR004329 CcmE/CycJ protein VM_04675 IPR036127 VM_04675 VM_04680 IPR002541 Cytochrome c assembly protein VM_04680 IPR003567 Cytochrome c-type biogenesis protein VM_04680 IPR003568 Cytochrome c-type biogenesis protein CcmF VM_04680 IPR032523 VM_04680 VM_04685 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE VM_04685 IPR013740 Redoxin VM_04685 IPR017937 Thioredoxin, conserved site VM_04685 IPR036249 VM_04685 VM_04690 IPR005616 Cytochrome C biogenesis protein CcmH VM_04690 IPR038297 VM_04690 VM_04695 IPR011990 Tetratricopeptide-like helical domain VM_04695 IPR017560 Cytochrome c-type biogenesis protein CcmI VM_04700 IPR007428 VacJ-like lipoprotein VM_04705 IPR002347 Glucose/ribitol dehydrogenase VM_04705 IPR036291 VM_04705 VM_04710 IPR021879 Ribosomal S4P (gammaproteobacterial) VM_04715 IPR001189 Manganese/iron superoxide dismutase VM_04715 IPR019831 Manganese/iron superoxide dismutase, N-terminal VM_04715 IPR019832 Manganese/iron superoxide dismutase, C-terminal VM_04715 IPR019833 Manganese/iron superoxide dismutase, binding site VM_04715 IPR036314 VM_04715 VM_04715 IPR036324 VM_04715 VM_04720 IPR002109 Glutaredoxin VM_04720 IPR004480 Monothiol glutaredoxin-related VM_04720 IPR014434 Monothiol glutaredoxin VM_04720 IPR036249 VM_04720 VM_04725 IPR003601 DNA topoisomerase, type IA, domain 2 VM_04725 IPR003602 DNA topoisomerase, type IA, DNA-binding domain VM_04725 IPR005738 DNA topoisomerase III VM_04725 IPR006171 Toprim domain VM_04725 IPR013497 DNA topoisomerase, type IA, central VM_04725 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 VM_04725 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 VM_04725 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 VM_04725 IPR023405 DNA topoisomerase, type IA, core domain VM_04725 IPR023406 DNA topoisomerase, type IA, active site VM_04730 IPR000286 Histone deacetylase superfamily VM_04730 IPR023696 Ureohydrolase domain VM_04730 IPR023801 Histone deacetylase domain VM_04730 IPR037138 VM_04730 VM_04735 IPR009057 Homeodomain-like VM_04735 IPR018060 DNA binding HTH domain, AraC-type VM_04735 IPR018062 HTH domain AraC-type, conserved site VM_04745 IPR002347 Glucose/ribitol dehydrogenase VM_04745 IPR036291 VM_04745 VM_04765 IPR000917 Sulfatase VM_04765 IPR012159 Membrane sulfatase, HI0842-related VM_04765 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha VM_04765 IPR017850 Alkaline-phosphatase-like, core domain VM_04765 IPR024588 Membrane sulfatase, HI0842-related, N-terminal domain VM_04770 IPR009857 Uncharacterised protein family UPF0352 VM_04770 IPR023202 YejL-like domain VM_04775 IPR007358 Nucleoid-associated protein NdpA VM_04780 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain VM_04780 IPR036641 VM_04780 VM_04785 IPR004770 Na+/H+ antiporter NhaC VM_04785 IPR018461 Na+/H+ antiporter, NhaC-like VM_04790 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site VM_04790 IPR000534 Semialdehyde dehydrogenase, NAD-binding VM_04790 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type VM_04790 IPR012080 Aspartate-semialdehyde dehydrogenase VM_04790 IPR012280 Semialdehyde dehydrogenase, dimerisation domain VM_04790 IPR036291 VM_04790 VM_04795 IPR005821 Ion transport domain VM_04795 IPR027359 Voltage-dependent channel, four helix bundle domain VM_04795 IPR028325 Voltage-gated potassium channel VM_04800 IPR002771 Multiple antibiotic resistance (MarC)-related VM_04805 IPR001670 Alcohol dehydrogenase, iron-type VM_04805 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase VM_04805 IPR015590 Aldehyde dehydrogenase domain VM_04805 IPR016161 Aldehyde/histidinol dehydrogenase VM_04805 IPR016162 Aldehyde dehydrogenase, N-terminal VM_04805 IPR016163 Aldehyde dehydrogenase, C-terminal VM_04805 IPR018211 Alcohol dehydrogenase, iron-type, conserved site VM_04815 IPR002645 STAS domain VM_04815 IPR011547 Sulphate transporter VM_04815 IPR036513 VM_04815 VM_04820 IPR003029 Ribosomal protein S1, RNA-binding domain VM_04820 IPR004659 Ribonuclease E/G VM_04820 IPR012340 Nucleic acid-binding, OB-fold VM_04820 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G VM_04820 IPR022967 RNA-binding domain, S1 VM_04820 IPR028878 Ribonuclease E VM_04830 IPR002942 RNA-binding S4 domain VM_04830 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F VM_04830 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site VM_04830 IPR006225 Pseudouridine synthase, RluC/RluD VM_04830 IPR020103 Pseudouridine synthase, catalytic domain VM_04830 IPR036986 VM_04830 VM_04835 IPR003697 Maf-like protein VM_04835 IPR029001 Inosine triphosphate pyrophosphatase-like VM_04840 IPR003772 Protein of unknown function DUF177 VM_04845 IPR002677 Ribosomal protein L32p VM_04845 IPR011332 Zinc-binding ribosomal protein VM_04850 IPR003664 Fatty acid synthesis PlsX protein VM_04850 IPR012281 Phospholipid biosynthesis protein, PlsX-like VM_04855 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 VM_04855 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal VM_04855 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VM_04855 IPR016039 Thiolase-like VM_04860 IPR001227 Acyl transferase domain VM_04860 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type VM_04860 IPR014043 Acyl transferase VM_04860 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VM_04860 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding VM_04860 IPR020801 Polyketide synthase, acyl transferase domain VM_04860 IPR024925 Malonyl CoA-acyl carrier protein transacylase VM_04865 IPR002347 Glucose/ribitol dehydrogenase VM_04865 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase VM_04865 IPR020904 Short-chain dehydrogenase/reductase, conserved site VM_04865 IPR036291 VM_04865 VM_04870 IPR003231 Acyl carrier protein (ACP) VM_04870 IPR006162 Phosphopantetheine attachment site VM_04870 IPR009081 Acyl carrier protein-like VM_04870 IPR036736 VM_04870 VM_04875 IPR014030 Beta-ketoacyl synthase, N-terminal VM_04875 IPR014031 Beta-ketoacyl synthase, C-terminal VM_04875 IPR016039 Thiolase-like VM_04875 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 VM_04875 IPR018201 Beta-ketoacyl synthase, active site VM_04875 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VM_04880 IPR001544 Aminotransferase, class IV VM_04880 IPR017824 Aminodeoxychorismate lyase, class IV VM_04880 IPR018300 Aminotransferase, class IV, conserved site VM_04880 IPR036038 VM_04880 VM_04885 IPR003770 Uncharacterised protein family UPF0755, YceG-like VM_04890 IPR018094 Thymidylate kinase VM_04890 IPR018095 Thymidylate kinase, conserved site VM_04890 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_04890 IPR039430 VM_04890 VM_04895 IPR004622 DNA polymerase III, delta prime subunit VM_04895 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal VM_04895 IPR015199 DNA polymerase III, delta subunit, C-terminal VM_04895 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_04900 IPR001130 TatD family VM_04900 IPR015991 Uncharacterised deoxyribonuclease TatD-type VM_04900 IPR018228 Deoxyribonuclease, TatD-related, conserved site VM_04900 IPR032466 VM_04900 VM_04905 IPR001996 Phosphotransferase system, IIB component, type 1 VM_04905 IPR003352 Phosphotransferase system, EIIC VM_04905 IPR011299 PTS system glucose-specific IIBC component VM_04905 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site VM_04905 IPR036878 VM_04905 VM_04915 IPR000175 Sodium:neurotransmitter symporter VM_04915 IPR037272 VM_04915 VM_04920 IPR000498 Outer membrane protein, OmpA-like, transmembrane domain VM_04920 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel VM_04925 IPR002641 Patatin/Phospholipase A2-related VM_04925 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VM_04930 IPR001697 Pyruvate kinase VM_04930 IPR011037 Pyruvate kinase-like, insert domain VM_04930 IPR015793 Pyruvate kinase, barrel VM_04930 IPR015795 Pyruvate kinase, C-terminal VM_04930 IPR015806 Pyruvate kinase, beta-barrel insert domain VM_04930 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain VM_04930 IPR018209 Pyruvate kinase, active site VM_04930 IPR036918 VM_04930 VM_04935 IPR000600 ROK VM_04935 IPR036388 VM_04935 VM_04935 IPR036390 VM_04935 VM_04940 IPR001789 Signal transduction response regulator, receiver domain VM_04940 IPR002545 CheW-like protein VM_04940 IPR011006 CheY-like superfamily VM_04940 IPR024181 Chemotaxis response regulator CheV VM_04940 IPR036061 VM_04940 VM_04945 IPR007138 Antibiotic biosynthesis monooxygenase-like domain VM_04945 IPR011008 Dimeric alpha-beta barrel VM_04950 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VM_04950 IPR018146 Glyoxalase I, conserved site VM_04950 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VM_04955 IPR027373 Ribbon-helix-helix domain VM_04955 IPR038268 VM_04955 VM_04965 IPR007314 Domain of unknown function DUF399 VM_04965 IPR016773 Ferric uptake regulator, CjrA, predicted VM_04970 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted VM_04970 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VM_04975 IPR016896 Protein of unknown function DUF2860 VM_04980 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase VM_04980 IPR011013 Galactose mutarotase-like domain VM_04980 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup VM_04980 IPR025532 Glucose-6-phosphate 1-epimerase VM_04985 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I VM_04985 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain VM_04985 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain VM_04985 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site VM_04985 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family VM_04985 IPR036291 VM_04985 VM_04990 IPR002579 Peptide methionine sulphoxide reductase MrsB VM_04990 IPR011057 Mss4-like VM_04995 IPR021372 Protein of unknown function DUF2989 VM_05000 IPR009749 Protein of unknown function DUF1315 VM_05005 IPR006033 L-asparaginase, type I VM_05005 IPR006034 Asparaginase/glutaminase VM_05005 IPR020827 Asparaginase/glutaminase, active site 1 VM_05005 IPR027473 L-asparaginase, C-terminal domain VM_05005 IPR027474 L-asparaginase, N-terminal VM_05005 IPR027475 Asparaginase/glutaminase, active site 2 VM_05005 IPR036152 VM_05005 VM_05005 IPR037152 VM_05005 VM_05010 IPR002142 Peptidase S49 VM_05010 IPR004634 Peptidase S49, protease IV VM_05010 IPR004635 Peptidase S49, SppA VM_05010 IPR029045 ClpP/crotonase-like domain VM_05015 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal VM_05015 IPR013785 Aldolase-type TIM barrel VM_05015 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain VM_05015 IPR036188 VM_05015 VM_05020 IPR002376 Formyl transferase, N-terminal VM_05020 IPR002912 ACT domain VM_05020 IPR004810 Formyltetrahydrofolate deformylase VM_05020 IPR036477 VM_05020 VM_05030 IPR006555 ATP-dependent helicase, C-terminal VM_05030 IPR014001 Helicase, superfamily 1/2, ATP-binding domain VM_05030 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_05035 IPR000905 Gcp-like domain VM_05035 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ VM_05045 IPR004658 Outer membrane lipoprotein Slp VM_05050 IPR000073 Alpha/beta hydrolase fold-1 VM_05050 IPR000639 Epoxide hydrolase-like VM_05050 IPR029058 Alpha/Beta hydrolase fold VM_05055 IPR000873 AMP-dependent synthetase/ligase VM_05055 IPR020845 AMP-binding, conserved site VM_05055 IPR025110 AMP-binding enzyme C-terminal domain VM_05060 IPR002121 HRDC domain VM_05060 IPR002562 3'-5' exonuclease domain VM_05060 IPR006292 Ribonuclease D VM_05060 IPR010997 HRDC-like VM_05060 IPR012337 Ribonuclease H-like domain VM_05060 IPR036397 VM_05060 VM_05065 IPR001567 Peptidase M3A/M3B VM_05065 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 VM_05065 IPR024079 Metallopeptidase, catalytic domain VM_05070 IPR022764 Peptidase S54, rhomboid domain VM_05070 IPR023826 Rhomboid-like serine protease, proteobacteria VM_05070 IPR035952 VM_05070 VM_05075 IPR005636 DTW VM_05080 IPR003607 HD/PDEase domain VM_05080 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase VM_05080 IPR006674 HD domain VM_05080 IPR023023 Deoxyguanosinetriphosphate triphosphohydrolase, type 2 VM_05080 IPR026875 Phosphohydrolase-associated domain VM_05085 IPR003607 HD/PDEase domain VM_05085 IPR006674 HD domain VM_05085 IPR022971 5'-deoxynucleotidase YfbR VM_05090 IPR004839 Aminotransferase, class I/classII VM_05090 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VM_05090 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VM_05090 IPR015424 Pyridoxal phosphate-dependent transferase VM_05095 IPR004561 Isochorismate synthase VM_05095 IPR005801 ADC synthase VM_05095 IPR015890 Chorismate binding, C-terminal VM_05095 IPR034681 VM_05095 VM_05100 IPR004433 Menaquinone biosynthesis protein MenD VM_05100 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding VM_05100 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain VM_05100 IPR029035 DHS-like NAD/FAD-binding domain VM_05100 IPR029061 Thiamin diphosphate-binding fold VM_05100 IPR032264 VM_05100 VM_05105 IPR000073 Alpha/beta hydrolase fold-1 VM_05105 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase VM_05105 IPR029058 Alpha/Beta hydrolase fold VM_05110 IPR001753 Crotonase superfamily VM_05110 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase VM_05110 IPR014748 Crontonase, C-terminal VM_05110 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site VM_05110 IPR029045 ClpP/crotonase-like domain VM_05115 IPR010196 O-succinylbenzoic acid (OSB) synthetase VM_05115 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal VM_05115 IPR029017 Enolase N-terminal domain-like VM_05115 IPR029065 Enolase C-terminal domain-like VM_05115 IPR036849 VM_05115 VM_05120 IPR000873 AMP-dependent synthetase/ligase VM_05120 IPR010192 2-succinylbenzoate--CoA ligase VM_05120 IPR020845 AMP-binding, conserved site VM_05125 IPR004711 Benzoate transporter VM_05130 IPR001387 Cro/C1-type helix-turn-helix domain VM_05130 IPR010982 Lambda repressor-like, DNA-binding domain VM_05130 IPR011051 RmlC-like cupin domain VM_05130 IPR013096 Cupin 2, conserved barrel VM_05130 IPR014710 RmlC-like jelly roll fold VM_05135 IPR003660 HAMP linker domain VM_05135 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_05140 IPR002123 Phospholipid/glycerol acyltransferase VM_05140 IPR011701 Major facilitator superfamily VM_05140 IPR036259 VM_05140 VM_05145 IPR009057 Homeodomain-like VM_05145 IPR025996 WHG domain VM_05145 IPR036271 VM_05145 VM_05150 IPR007379 Tim44-like domain VM_05150 IPR010903 Protein of unknown function DUF1517 VM_05150 IPR032710 VM_05150 VM_05155 IPR023163 SMc04008-like domain VM_05155 IPR036810 VM_05155 VM_05160 IPR007298 Copper resistance lipoprotein NlpE VM_05165 IPR005527 Septum formation topological specificity factor MinE VM_05165 IPR036707 VM_05165 VM_05170 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain VM_05170 IPR010223 ATP binding protein MinD, bacterial-type VM_05170 IPR025501 ATP binding protein MinD VM_05170 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_05175 IPR005526 Septum formation inhibitor MinC, C-terminal VM_05175 IPR007874 Septum formation inhibitor MinC, N-terminal VM_05175 IPR013033 Septum formation inhibitor MinC VM_05175 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal VM_05175 IPR036145 VM_05175 VM_05175 IPR038061 VM_05175 VM_05180 IPR027354 YcgL domain VM_05180 IPR038068 VM_05180 VM_05185 IPR011970 Lytic murein transglycosylase VM_05185 IPR023346 Lysozyme-like domain VM_05185 IPR031304 VM_05185 VM_05190 IPR000847 Transcription regulator HTH, LysR VM_05190 IPR005119 LysR, substrate-binding VM_05190 IPR036388 VM_05190 VM_05190 IPR036390 VM_05190 VM_05195 IPR002668 Concentrative nucleoside transporter N-terminal domain VM_05195 IPR011642 Nucleoside recognition Gate VM_05195 IPR011657 Concentrative nucleoside transporter C-terminal domain VM_05195 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial VM_05200 IPR001223 Glycoside hydrolase, family 18, catalytic domain VM_05200 IPR001579 Glycoside hydrolase, chitinase active site VM_05200 IPR003610 Carbohydrate-binding module family 5/12 VM_05200 IPR011583 Chitinase II VM_05200 IPR013783 Immunoglobulin-like fold VM_05200 IPR017853 Glycoside hydrolase, superfamily VM_05200 IPR036573 VM_05200 VM_05210 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase VM_05210 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain VM_05210 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain VM_05210 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site VM_05210 IPR036291 VM_05210 VM_05220 IPR014550 Uncharacterised conserved protein UCP028704, OpgC VM_05225 IPR001123 Lysine-type exporter protein (LYSE/YGGA) VM_05230 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VM_05230 IPR036938 VM_05230 VM_05235 IPR003610 Carbohydrate-binding module family 5/12 VM_05235 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like VM_05235 IPR036573 VM_05235 VM_05240 IPR029069 HotDog domain VM_05245 IPR002123 Phospholipid/glycerol acyltransferase VM_05250 IPR000374 Phosphatidate cytidylyltransferase VM_05255 IPR000462 CDP-alcohol phosphatidyltransferase VM_05260 IPR000160 GGDEF domain VM_05260 IPR001633 EAL domain VM_05260 IPR029787 Nucleotide cyclase VM_05260 IPR035919 VM_05260 VM_05265 IPR036374 VM_05265 VM_05275 IPR003846 Uncharacterised protein family UPF0061 VM_05280 IPR004682 TRAP dicarboxylate transporter VM_05280 IPR018389 Bacterial extracellular solute-binding protein, family 7 VM_05280 IPR038404 VM_05280 VM_05285 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component VM_05290 IPR004681 TRAP transporter permease protein VM_05290 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VM_05295 IPR001789 Signal transduction response regulator, receiver domain VM_05295 IPR002078 RNA polymerase sigma factor 54 interaction domain VM_05295 IPR002197 DNA binding HTH domain, Fis-type VM_05295 IPR003593 AAA+ ATPase domain VM_05295 IPR009057 Homeodomain-like VM_05295 IPR011006 CheY-like superfamily VM_05295 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VM_05295 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VM_05295 IPR025944 Sigma-54 interaction domain, conserved site VM_05295 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_05300 IPR003594 Histidine kinase-like ATPase, C-terminal domain VM_05300 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain VM_05300 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_05300 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) VM_05300 IPR029151 Periplasmic sensor domain-like VM_05300 IPR033479 VM_05300 VM_05300 IPR036097 VM_05300 VM_05300 IPR036890 VM_05300 VM_05310 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain VM_05310 IPR005215 Trigger factor VM_05310 IPR008880 Trigger factor, C-terminal domain VM_05310 IPR008881 Trigger factor, ribosome-binding, bacterial VM_05310 IPR027304 Trigger factor/SurA domain VM_05310 IPR036611 VM_05310 VM_05310 IPR037041 VM_05310 VM_05315 IPR001907 ATP-dependent Clp protease proteolytic subunit VM_05315 IPR018215 ClpP, active site VM_05315 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA VM_05315 IPR029045 ClpP/crotonase-like domain VM_05315 IPR033135 VM_05315 VM_05320 IPR003593 AAA+ ATPase domain VM_05320 IPR003959 ATPase, AAA-type, core VM_05320 IPR004487 Clp protease, ATP-binding subunit ClpX VM_05320 IPR010603 Zinc finger, ClpX C4-type VM_05320 IPR019489 Clp ATPase, C-terminal VM_05320 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_05320 IPR038366 VM_05320 VM_05325 IPR003111 Peptidase S16, lon N-terminal VM_05325 IPR003593 AAA+ ATPase domain VM_05325 IPR003959 ATPase, AAA-type, core VM_05325 IPR004815 Lon protease, bacterial/eukaryotic-type VM_05325 IPR008268 Peptidase S16, active site VM_05325 IPR008269 Peptidase S16, Lon C-terminal VM_05325 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VM_05325 IPR015947 PUA-like domain VM_05325 IPR020568 Ribosomal protein S5 domain 2-type fold VM_05325 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_05325 IPR027543 Lon protease, bacterial VM_05330 IPR000119 Histone-like bacterial DNA-binding protein VM_05330 IPR010992 Integration host factor (IHF)-like DNA-binding domain VM_05330 IPR020816 Histone-like DNA-binding protein, conserved site VM_05335 IPR027304 Trigger factor/SurA domain VM_05340 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 VM_05340 IPR004509 Competence protein ComEA, helix-hairpin-helix domain VM_05340 IPR010994 RuvA domain 2-like VM_05345 IPR002686 Transposase IS200-like VM_05345 IPR036515 VM_05345 VM_05350 IPR003136 Cytidylate kinase VM_05350 IPR011994 Cytidylate kinase domain VM_05350 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_05355 IPR000110 Ribosomal protein S1 VM_05355 IPR003029 Ribosomal protein S1, RNA-binding domain VM_05355 IPR012340 Nucleic acid-binding, OB-fold VM_05355 IPR022967 RNA-binding domain, S1 VM_05360 IPR000119 Histone-like bacterial DNA-binding protein VM_05360 IPR005685 Integration host factor, beta subunit VM_05360 IPR010992 Integration host factor (IHF)-like DNA-binding domain VM_05360 IPR020816 Histone-like DNA-binding protein, conserved site VM_05365 IPR010445 Protein of unknown function DUF1049 VM_05365 IPR032906 VM_05365 VM_05370 IPR011990 Tetratricopeptide-like helical domain VM_05370 IPR019734 Tetratricopeptide repeat VM_05370 IPR030865 VM_05370 VM_05375 IPR001754 Orotidine 5'-phosphate decarboxylase domain VM_05375 IPR011060 Ribulose-phosphate binding barrel VM_05375 IPR013785 Aldolase-type TIM barrel VM_05375 IPR014732 Orotidine 5'-phosphate decarboxylase VM_05375 IPR018089 Orotidine 5'-phosphate decarboxylase, active site VM_05380 IPR001789 Signal transduction response regulator, receiver domain VM_05380 IPR003594 Histidine kinase-like ATPase, C-terminal domain VM_05380 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain VM_05380 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_05380 IPR011006 CheY-like superfamily VM_05380 IPR036097 VM_05380 VM_05380 IPR036890 VM_05380 VM_05385 IPR011644 Heme-NO binding VM_05385 IPR024096 NO signalling/Golgi transport ligand-binding domain VM_05385 IPR038158 VM_05385 VM_05390 IPR003362 Bacterial sugar transferase VM_05395 IPR029044 Nucleotide-diphospho-sugar transferases VM_05400 IPR001296 Glycosyl transferase, family 1 VM_05400 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain VM_05405 IPR003856 Lipopolysaccharide biosynthesis VM_05415 IPR001451 Bacterial transferase hexapeptide repeat VM_05415 IPR011004 Trimeric LpxA-like VM_05415 IPR018357 Hexapeptide transferase, conserved site VM_05420 IPR007016 O-antigen ligase-related VM_05425 IPR002797 Polysaccharide biosynthesis protein VM_05430 IPR001296 Glycosyl transferase, family 1 VM_05435 IPR001296 Glycosyl transferase, family 1 VM_05435 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain VM_05440 IPR001296 Glycosyl transferase, family 1 VM_05440 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain VM_05445 IPR001789 Signal transduction response regulator, receiver domain VM_05445 IPR002078 RNA polymerase sigma factor 54 interaction domain VM_05445 IPR002197 DNA binding HTH domain, Fis-type VM_05445 IPR003593 AAA+ ATPase domain VM_05445 IPR009057 Homeodomain-like VM_05445 IPR011006 CheY-like superfamily VM_05445 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VM_05445 IPR025944 Sigma-54 interaction domain, conserved site VM_05445 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_05450 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain VM_05450 IPR036641 VM_05450 VM_05455 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_05460 IPR003715 Polysaccharide export protein VM_05460 IPR019554 Soluble ligand binding domain VM_05465 IPR006664 Outer membrane protein, bacterial VM_05465 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal VM_05465 IPR036737 VM_05465 VM_05470 IPR002645 STAS domain VM_05470 IPR036513 VM_05470 VM_05475 IPR005135 Endonuclease/exonuclease/phosphatase VM_05475 IPR036691 VM_05475 VM_05485 IPR031025 VM_05485 VM_05485 IPR032295 VM_05485 VM_05490 IPR000515 MetI-like domain VM_05490 IPR035906 VM_05490 VM_05495 IPR000515 MetI-like domain VM_05495 IPR035906 VM_05495 VM_05500 IPR000914 Bacterial extracellular solute-binding protein, family 5 VM_05500 IPR030678 VM_05500 VM_05505 IPR003439 ABC transporter-like VM_05505 IPR003593 AAA+ ATPase domain VM_05505 IPR017871 ABC transporter, conserved site VM_05505 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_05520 IPR024079 Metallopeptidase, catalytic domain VM_05520 IPR032534 VM_05520 VM_05525 IPR009078 Ferritin-like superfamily VM_05525 IPR010386 tRNA-hydroxylase MiaE VM_05525 IPR012347 Ferritin-related VM_05535 IPR000847 Transcription regulator HTH, LysR VM_05535 IPR005119 LysR, substrate-binding VM_05535 IPR036388 VM_05535 VM_05535 IPR036390 VM_05535 VM_05540 IPR025714 Methyltransferase domain VM_05540 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VM_05545 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain VM_05545 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal VM_05545 IPR008141 Alanine dehydrogenase VM_05545 IPR036291 VM_05545 VM_05550 IPR000485 AsnC-type HTH domain VM_05550 IPR011008 Dimeric alpha-beta barrel VM_05550 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VM_05550 IPR019887 Transcription regulator AsnC-type, C-terminal VM_05550 IPR019888 Transcription regulator AsnC-type VM_05550 IPR036388 VM_05550 VM_05550 IPR036390 VM_05550 VM_05555 IPR002543 FtsK domain VM_05555 IPR018541 FtsK gamma domain VM_05555 IPR025199 Domain of unknown function DUF4117 VM_05555 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_05555 IPR036388 VM_05555 VM_05555 IPR036390 VM_05555 VM_05560 IPR003752 Disulphide bond formation protein DsbB/BdbC VM_05560 IPR022920 Disulphide bond formation protein DsbB VM_05560 IPR023380 Disulphide bond formation protein DsbB-like domain VM_05565 IPR004671 Na+/H+ antiporter NhaB VM_05570 IPR000524 Transcription regulator HTH, GntR VM_05570 IPR008920 Transcription regulator FadR/GntR, C-terminal VM_05570 IPR014178 Fatty acid response transcription factor FadR VM_05570 IPR028374 FadR, C-terminal domain VM_05570 IPR036388 VM_05570 VM_05570 IPR036390 VM_05570 VM_05575 IPR011335 Restriction endonuclease type II-like VM_05575 IPR011856 tRNA endonuclease-like domain VM_05575 IPR015093 Protein of unknown function DUF1887 VM_05585 IPR001310 Histidine triad (HIT) protein VM_05585 IPR019808 Histidine triad, conserved site VM_05585 IPR036265 VM_05585 VM_05590 IPR011990 Tetratricopeptide-like helical domain VM_05595 IPR010824 Protein of unknown function DUF1425 VM_05595 IPR038483 VM_05595 VM_05600 IPR014094 Penicillin-binding protein activator LpoB VM_05605 IPR011009 Protein kinase-like domain VM_05610 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA VM_05610 IPR022987 Uncharacterised protein family UPF0227 VM_05610 IPR029058 Alpha/Beta hydrolase fold VM_05615 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain VM_05615 IPR036188 VM_05615 VM_05620 IPR000182 GNAT domain VM_05620 IPR016181 Acyl-CoA N-acyltransferase VM_05625 IPR021241 Protein of unknown function DUF2803 VM_05630 IPR001650 Helicase, C-terminal VM_05630 IPR003711 CarD-like/TRCF domain VM_05630 IPR004576 Transcription-repair coupling factor VM_05630 IPR005118 Transcription-repair-coupling factor, C-terminal domain VM_05630 IPR011545 DEAD/DEAH box helicase domain VM_05630 IPR014001 Helicase, superfamily 1/2, ATP-binding domain VM_05630 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_05630 IPR036101 VM_05630 VM_05630 IPR037235 VM_05630 VM_05640 IPR003838 Permease FtsX-like VM_05640 IPR011925 Lipoprotein releasing system, transmembrane protein, LolC/E family VM_05640 IPR025857 MacB-like periplasmic core domain VM_05645 IPR003439 ABC transporter-like VM_05645 IPR003593 AAA+ ATPase domain VM_05645 IPR011924 Lipoprotein releasing system, ATP-binding protein VM_05645 IPR017871 ABC transporter, conserved site VM_05645 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_05650 IPR003838 Permease FtsX-like VM_05650 IPR011925 Lipoprotein releasing system, transmembrane protein, LolC/E family VM_05650 IPR011926 Lipoprotein releasing system, transmembrane protein LolE VM_05650 IPR025857 MacB-like periplasmic core domain VM_05655 IPR018639 Domain of unknown function DUF2062 VM_05660 IPR001279 Beta-lactamase-like VM_05660 IPR004477 ComEC/Rec2-related protein VM_05660 IPR004797 Competence protein ComEC/Rec2 VM_05660 IPR025405 Domain of unknown function DUF4131 VM_05660 IPR036866 VM_05660 VM_05665 IPR003439 ABC transporter-like VM_05665 IPR003593 AAA+ ATPase domain VM_05665 IPR011527 ABC transporter type 1, transmembrane domain VM_05665 IPR011917 ABC transporter, lipid A export, MsbA VM_05665 IPR017871 ABC transporter, conserved site VM_05665 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_05665 IPR036640 VM_05665 VM_05670 IPR003758 Tetraacyldisaccharide 4'-kinase VM_05670 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_05675 IPR005651 Uncharacterised protein family UPF0434/Trm112 VM_05675 IPR038053 VM_05675 VM_05680 IPR003329 Acylneuraminate cytidylyltransferase VM_05680 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase VM_05680 IPR029044 Nucleotide-diphospho-sugar transferases VM_05685 IPR006059 Bacterial extracellular solute-binding, family 1 VM_05690 IPR003594 Histidine kinase-like ATPase, C-terminal domain VM_05690 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_05690 IPR036097 VM_05690 VM_05690 IPR036890 VM_05690 VM_05695 IPR001789 Signal transduction response regulator, receiver domain VM_05695 IPR001867 Signal transduction response regulator, C-terminal VM_05695 IPR011006 CheY-like superfamily VM_05695 IPR016032 Signal transduction response regulator, C-terminal effector VM_05695 IPR036388 VM_05695 VM_05700 IPR001996 Phosphotransferase system, IIB component, type 1 VM_05700 IPR003352 Phosphotransferase system, EIIC VM_05700 IPR011299 PTS system glucose-specific IIBC component VM_05700 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site VM_05700 IPR036878 VM_05700 VM_05705 IPR007390 Sporulation stage V, protein R VM_05710 IPR006698 Thermus phage phiYS40, Orf56 VM_05715 IPR010650 PrkA C-terminal domain VM_05715 IPR013153 PrkA AAA domain VM_05715 IPR016230 Serine-protein kinase, PrkA VM_05715 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_05720 IPR005587 Uncharacterised protein family UPF0304, YfbU VM_05720 IPR023145 YfbU, helix-hairpin domain VM_05720 IPR023146 YfbU, alpha-helical bundle domain VM_05725 IPR002751 Cobalamin (vitamin B12) biosynthesis CbiM family VM_05730 IPR001989 Radical-activating enzyme, conserved site VM_05730 IPR007197 Radical SAM VM_05730 IPR012838 Pyruvate formate-lyase activating enzyme VM_05730 IPR012839 Glycyl radical enzyme activase VM_05730 IPR013785 Aldolase-type TIM barrel VM_05735 IPR003660 HAMP linker domain VM_05735 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_05735 IPR004090 Chemotaxis methyl-accepting receptor VM_05740 IPR018707 Protein of unknown function DUF2219 VM_05740 IPR037107 VM_05740 VM_05745 IPR001150 Glycine radical domain VM_05745 IPR004184 Pyruvate formate lyase domain VM_05745 IPR005949 Formate acetyltransferase VM_05745 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VM_05750 IPR021794 Protein of unknown function DUF3360 VM_05755 IPR003439 ABC transporter-like VM_05755 IPR003593 AAA+ ATPase domain VM_05755 IPR017871 ABC transporter, conserved site VM_05755 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_05755 IPR030679 VM_05755 VM_05760 IPR001320 Ionotropic glutamate receptor VM_05760 IPR001638 Extracellular solute-binding protein, family 3 VM_05760 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein VM_05765 IPR000515 MetI-like domain VM_05765 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family VM_05765 IPR035906 VM_05765 VM_05770 IPR000515 MetI-like domain VM_05770 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family VM_05770 IPR035906 VM_05770 VM_05775 IPR004808 AP endonuclease 1 VM_05775 IPR005135 Endonuclease/exonuclease/phosphatase VM_05775 IPR020847 AP endonuclease 1, binding site VM_05775 IPR020848 AP endonuclease 1, conserved site VM_05775 IPR036691 VM_05775 VM_05780 IPR003660 HAMP linker domain VM_05780 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_05785 IPR019630 Protein of unknown function DUF2496, YbaM-related VM_05790 IPR010890 Primosomal replication PriB/PriC VM_05790 IPR038338 VM_05790 VM_05795 IPR002781 Transmembrane protein TauE like VM_05800 IPR006555 ATP-dependent helicase, C-terminal VM_05800 IPR010614 DEAD2 VM_05800 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_05800 IPR039000 VM_05800 VM_05805 IPR023614 Porin domain VM_05810 IPR004027 SEC-C motif VM_05810 IPR032710 VM_05810 VM_05815 IPR001633 EAL domain VM_05815 IPR013976 Metal-dependent hydrolase HDOD VM_05815 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing VM_05815 IPR035919 VM_05815 VM_05820 IPR004843 Calcineurin-like phosphoesterase domain, apaH type VM_05820 IPR010138 UDP-2,3-diacylglucosamine hydrolase VM_05820 IPR029052 Metallo-dependent phosphatase-like VM_05825 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain VM_05825 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site VM_05825 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase VM_05825 IPR029000 Cyclophilin-like domain VM_05830 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding VM_05830 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_05830 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR VM_05830 IPR015803 Cysteine-tRNA ligase VM_05830 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase VM_05830 IPR032678 VM_05830 VM_05835 IPR002176 Crossover junction endodeoxyribonuclease RuvC VM_05835 IPR012337 Ribonuclease H-like domain VM_05835 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site VM_05835 IPR036397 VM_05835 VM_05840 IPR000085 Bacterial DNA recombination protein RuvA VM_05840 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 VM_05840 IPR010994 RuvA domain 2-like VM_05840 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal VM_05840 IPR012340 Nucleic acid-binding, OB-fold VM_05840 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial VM_05840 IPR036267 VM_05840 VM_05845 IPR003593 AAA+ ATPase domain VM_05845 IPR004605 DNA helicase, Holliday junction RuvB type VM_05845 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal VM_05845 IPR008824 DNA helicase, Holliday junction RuvB type, N-terminal VM_05845 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_05845 IPR036388 VM_05845 VM_05845 IPR036390 VM_05845 VM_05850 IPR002585 Cytochrome d ubiquinol oxidase, subunit I VM_05855 IPR003317 Cytochrome d ubiquinol oxidase, subunit II VM_05860 IPR011724 Cyd operon protein YbgT VM_05860 IPR012994 Membrane bound YbgT-like VM_05865 IPR011846 Cyd operon protein YbgE VM_05870 IPR006683 Thioesterase superfamily VM_05870 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family VM_05870 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase VM_05870 IPR029069 HotDog domain VM_05875 IPR002898 MotA/TolQ/ExbB proton channel VM_05875 IPR014163 Tol-Pal system, TolQ VM_05880 IPR003400 Biopolymer transport protein ExbD/TolR VM_05880 IPR014168 Biopolymer transport, TolR VM_05885 IPR014161 Tol-Pal system, TolA VM_05890 IPR007195 TolB, N-terminal VM_05890 IPR011042 Six-bladed beta-propeller, TolB-like VM_05890 IPR011659 WD40-like Beta Propeller VM_05890 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB VM_05890 IPR036752 VM_05890 VM_05895 IPR006664 Outer membrane protein, bacterial VM_05895 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal VM_05895 IPR006690 Outer membrane protein, OmpA-like, conserved site VM_05895 IPR014169 Peptidoglycan-associated lipoprotein VM_05895 IPR036737 VM_05895 VM_05895 IPR039001 VM_05895 VM_05900 IPR011990 Tetratricopeptide-like helical domain VM_05900 IPR014162 Tol-Pal system, YbgF VM_05900 IPR019734 Tetratricopeptide repeat VM_05900 IPR032519 VM_05900 VM_05900 IPR034706 VM_05900 VM_05905 IPR003473 Quinolinate synthetase A VM_05905 IPR023513 Quinolinate synthase A, type 1 VM_05905 IPR036094 VM_05905 VM_05910 IPR011978 Uncharacterised protein family UPF0149 VM_05910 IPR036255 VM_05910 VM_05915 IPR001789 Signal transduction response regulator, receiver domain VM_05915 IPR003594 Histidine kinase-like ATPase, C-terminal domain VM_05915 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain VM_05915 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_05915 IPR011006 CheY-like superfamily VM_05915 IPR033479 VM_05915 VM_05915 IPR036097 VM_05915 VM_05915 IPR036890 VM_05915 VM_05920 IPR010574 L-alanine exporter AlaE VM_05925 IPR001250 Mannose-6-phosphate isomerase, type I VM_05925 IPR011051 RmlC-like cupin domain VM_05925 IPR014710 RmlC-like jelly roll fold VM_05925 IPR016305 Mannose-6-phosphate isomerase VM_05925 IPR018050 Phosphomannose isomerase, type I, conserved site VM_05930 IPR002178 PTS EIIA type-2 domain VM_05930 IPR003352 Phosphotransferase system, EIIC VM_05930 IPR003353 Phosphotransferase system, fructose-specific IIB subunit VM_05930 IPR003501 Phosphotransferase system, EIIB component, type 2/3 VM_05930 IPR004715 Phosphotransferase system, IIA component fructose subfamily VM_05930 IPR006327 Phosphotransferase system, fructose IIC component VM_05930 IPR016152 Phosphotransferase/anion transporter VM_05930 IPR036095 VM_05930 VM_05935 IPR009057 Homeodomain-like VM_05935 IPR018060 DNA binding HTH domain, AraC-type VM_05935 IPR018062 HTH domain AraC-type, conserved site VM_05935 IPR020449 Transcription regulator HTH, AraC- type VM_05940 IPR002178 PTS EIIA type-2 domain VM_05940 IPR016152 Phosphotransferase/anion transporter VM_05940 IPR016910 Uncharacterised conserved protein UCP029195, PTS-EIIA 2 VM_05940 IPR035895 VM_05940 VM_05945 IPR003353 Phosphotransferase system, fructose-specific IIB subunit VM_05945 IPR003501 Phosphotransferase system, EIIB component, type 2/3 VM_05945 IPR036095 VM_05945 VM_05950 IPR002178 PTS EIIA type-2 domain VM_05950 IPR003352 Phosphotransferase system, EIIC VM_05950 IPR003353 Phosphotransferase system, fructose-specific IIB subunit VM_05950 IPR003501 Phosphotransferase system, EIIB component, type 2/3 VM_05950 IPR004715 Phosphotransferase system, IIA component fructose subfamily VM_05950 IPR006327 Phosphotransferase system, fructose IIC component VM_05950 IPR016152 Phosphotransferase/anion transporter VM_05950 IPR036095 VM_05950 VM_05955 IPR000524 Transcription regulator HTH, GntR VM_05955 IPR004839 Aminotransferase, class I/classII VM_05955 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VM_05955 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VM_05955 IPR015424 Pyridoxal phosphate-dependent transferase VM_05955 IPR036388 VM_05955 VM_05955 IPR036390 VM_05955 VM_05960 IPR000620 Drug/metabolite transporter VM_05965 IPR005887 Alpha-1,2-mannosidase, putative VM_05965 IPR008928 Six-hairpin glycosidase-like VM_05965 IPR012939 Glycosyl hydrolase family 92 VM_05965 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup VM_05970 IPR005887 Alpha-1,2-mannosidase, putative VM_05970 IPR008928 Six-hairpin glycosidase-like VM_05970 IPR012939 Glycosyl hydrolase family 92 VM_05970 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup VM_05975 IPR005887 Alpha-1,2-mannosidase, putative VM_05975 IPR008928 Six-hairpin glycosidase-like VM_05975 IPR012939 Glycosyl hydrolase family 92 VM_05980 IPR005887 Alpha-1,2-mannosidase, putative VM_05980 IPR008928 Six-hairpin glycosidase-like VM_05980 IPR012939 Glycosyl hydrolase family 92 VM_05980 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup VM_05985 IPR005887 Alpha-1,2-mannosidase, putative VM_05985 IPR008928 Six-hairpin glycosidase-like VM_05985 IPR012939 Glycosyl hydrolase family 92 VM_05985 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup VM_05990 IPR003353 Phosphotransferase system, fructose-specific IIB subunit VM_05990 IPR003501 Phosphotransferase system, EIIB component, type 2/3 VM_05990 IPR006327 Phosphotransferase system, fructose IIC component VM_05990 IPR036095 VM_05990 VM_05995 IPR002178 PTS EIIA type-2 domain VM_05995 IPR016152 Phosphotransferase/anion transporter VM_06005 IPR002104 Integrase, catalytic VM_06005 IPR011010 DNA breaking-rejoining enzyme, catalytic core VM_06005 IPR013762 Integrase-like, catalytic core VM_06010 IPR001584 Integrase, catalytic core VM_06010 IPR009057 Homeodomain-like VM_06010 IPR012337 Ribonuclease H-like domain VM_06010 IPR036397 VM_06010 VM_06015 IPR007685 RelA/SpoT VM_06020 IPR007358 Nucleoid-associated protein NdpA VM_06025 IPR025325 Protein of unknown function DUF4231 VM_06050 IPR005594 YadA-like, C-terminal VM_06055 IPR003115 ParB/Sulfiredoxin VM_06055 IPR036086 VM_06055 VM_06060 IPR002500 Phosphoadenosine phosphosulphate reductase VM_06060 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_06060 IPR021845 Protein of unknown function DUF3440 VM_06065 IPR003343 Bacterial Ig-like, group 2 VM_06065 IPR008964 Invasin/intimin cell-adhesion VM_06070 IPR000917 Sulfatase VM_06070 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha VM_06070 IPR017850 Alkaline-phosphatase-like, core domain VM_06075 IPR002823 Protein of unknown function DUF112, transmembrane VM_06080 IPR009936 Protein of unknown function DUF1468 VM_06085 IPR005064 Bordetella uptake gene VM_06090 IPR000847 Transcription regulator HTH, LysR VM_06090 IPR005119 LysR, substrate-binding VM_06090 IPR036388 VM_06090 VM_06090 IPR036390 VM_06090 VM_06100 IPR006626 Parallel beta-helix repeat VM_06100 IPR011050 Pectin lyase fold/virulence factor VM_06100 IPR039448 VM_06100 VM_06105 IPR000322 Glycoside hydrolase, family 31 VM_06105 IPR011013 Galactose mutarotase-like domain VM_06105 IPR013780 Glycosyl hydrolase, family 13, all-beta VM_06105 IPR017853 Glycoside hydrolase, superfamily VM_06105 IPR032513 VM_06105 VM_06105 IPR033403 VM_06105 VM_06110 IPR009057 Homeodomain-like VM_06110 IPR018060 DNA binding HTH domain, AraC-type VM_06110 IPR018062 HTH domain AraC-type, conserved site VM_06110 IPR020449 Transcription regulator HTH, AraC- type VM_06125 IPR000045 Prepilin type IV endopeptidase, peptidase domain VM_06130 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_06135 IPR013974 SAF domain VM_06135 IPR017592 Pilus assembly, Flp-type CpaB VM_06135 IPR031571 VM_06135 VM_06150 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal VM_06155 IPR012495 TadE-like VM_06160 IPR012495 TadE-like VM_06165 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_06170 IPR001482 Type II secretion system protein E VM_06170 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_06175 IPR018076 Type II secretion system F domain VM_06180 IPR018076 Type II secretion system F domain VM_06185 IPR011990 Tetratricopeptide-like helical domain VM_06185 IPR013105 Tetratricopeptide TPR2 VM_06185 IPR019734 Tetratricopeptide repeat VM_06190 IPR001661 Glycoside hydrolase, family 37 VM_06190 IPR008928 Six-hairpin glycosidase-like VM_06190 IPR012341 Six-hairpin glycosidase VM_06195 IPR004199 Beta galactosidase small chain/ domain 5 VM_06195 IPR006103 Glycoside hydrolase, family 2, TIM barrel VM_06195 IPR011013 Galactose mutarotase-like domain VM_06195 IPR013783 Immunoglobulin-like fold VM_06195 IPR017853 Glycoside hydrolase, superfamily VM_06195 IPR036156 VM_06195 VM_06200 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily VM_06205 IPR000281 Helix-turn-helix protein RpiR VM_06205 IPR001347 Sugar isomerase (SIS) VM_06205 IPR009057 Homeodomain-like VM_06205 IPR036388 VM_06205 VM_06210 IPR004669 C4-dicarboxylate anaerobic carrier VM_06210 IPR018385 C4-dicarboxylate anaerobic carrier-like VM_06215 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site VM_06215 IPR002933 Peptidase M20 VM_06215 IPR010161 Peptidase M20B, tripeptide aminopeptidase VM_06215 IPR036264 VM_06215 VM_06220 IPR005320 Peptidase S51 VM_06220 IPR029062 Class I glutamine amidotransferase-like VM_06225 IPR001633 EAL domain VM_06225 IPR035919 VM_06225 VM_06230 IPR001036 Acriflavin resistance protein VM_06230 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VM_06235 IPR006143 RND efflux pump, membrane fusion protein VM_06235 IPR032317 VM_06235 VM_06240 IPR001647 DNA-binding HTH domain, TetR-type VM_06240 IPR009057 Homeodomain-like VM_06240 IPR036271 VM_06240 VM_06240 IPR039536 VM_06240 VM_06245 IPR010102 Succinate semialdehyde dehydrogenase VM_06245 IPR015590 Aldehyde dehydrogenase domain VM_06245 IPR016161 Aldehyde/histidinol dehydrogenase VM_06245 IPR016162 Aldehyde dehydrogenase, N-terminal VM_06245 IPR016163 Aldehyde dehydrogenase, C-terminal VM_06245 IPR029510 Aldehyde dehydrogenase, glutamic acid active site VM_06250 IPR009971 Protein of unknown function DUF1496 VM_06255 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase VM_06255 IPR036052 VM_06255 VM_06260 IPR001647 DNA-binding HTH domain, TetR-type VM_06260 IPR009057 Homeodomain-like VM_06260 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VM_06260 IPR036271 VM_06260 VM_06265 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain VM_06265 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal VM_06265 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain VM_06265 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal VM_06265 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type VM_06265 IPR036250 VM_06265 VM_06265 IPR037069 VM_06265 VM_06270 IPR010758 Trans-2-enoyl-CoA reductase VM_06270 IPR024906 Enoyl reductase FAD binding domain VM_06270 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative VM_06275 IPR004368 Translation initiation factor IF-1 VM_06275 IPR006196 RNA-binding domain, S1, IF1 type VM_06275 IPR012340 Nucleic acid-binding, OB-fold VM_06275 IPR022967 RNA-binding domain, S1 VM_06280 IPR007471 Arginine-tRNA-protein transferase, N-terminal VM_06280 IPR007472 Arginine-tRNA-protein transferase, C-terminal VM_06280 IPR016181 Acyl-CoA N-acyltransferase VM_06280 IPR017138 Arginine-tRNA-protein transferase, predicted, prokaryotic VM_06285 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase VM_06285 IPR016181 Acyl-CoA N-acyltransferase VM_06295 IPR001986 Enolpyruvate transferase domain VM_06295 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase VM_06295 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta VM_06295 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site VM_06295 IPR036968 VM_06295 VM_06300 IPR019633 Protein of unknown function DUF2498 VM_06300 IPR038191 VM_06300 VM_06305 IPR003601 DNA topoisomerase, type IA, domain 2 VM_06305 IPR003602 DNA topoisomerase, type IA, DNA-binding domain VM_06305 IPR005733 DNA topoisomerase I, bacterial-type VM_06305 IPR006171 Toprim domain VM_06305 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type VM_06305 IPR013497 DNA topoisomerase, type IA, central VM_06305 IPR013498 DNA topoisomerase, type IA, zn finger VM_06305 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 VM_06305 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 VM_06305 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 VM_06305 IPR023405 DNA topoisomerase, type IA, core domain VM_06305 IPR023406 DNA topoisomerase, type IA, active site VM_06305 IPR028612 DNA topoisomerase I, type IA VM_06315 IPR001296 Glycosyl transferase, family 1 VM_06315 IPR011835 Glycogen/starch synthase, ADP-glucose type VM_06315 IPR013534 Starch synthase, catalytic domain VM_06320 IPR000073 Alpha/beta hydrolase fold-1 VM_06320 IPR000639 Epoxide hydrolase-like VM_06320 IPR029058 Alpha/Beta hydrolase fold VM_06325 IPR018551 Domain of unknown function DUF2007 VM_06330 IPR032816 VM_06330 VM_06340 IPR000843 Transcription regulator HTH, LacI VM_06340 IPR010982 Lambda repressor-like, DNA-binding domain VM_06340 IPR023588 Transcription regulator HTH, PurR VM_06340 IPR028082 Periplasmic binding protein-like I VM_06345 IPR020945 DMSO/Nitrate reductase chaperone VM_06345 IPR023069 Chaperone TorD VM_06345 IPR036386 VM_06345 VM_06345 IPR036411 VM_06345 VM_06350 IPR001789 Signal transduction response regulator, receiver domain VM_06350 IPR001867 Signal transduction response regulator, C-terminal VM_06350 IPR011006 CheY-like superfamily VM_06350 IPR036388 VM_06350 VM_06355 IPR003201 Transposase Tn5, dimerisation VM_06355 IPR012337 Ribonuclease H-like domain VM_06355 IPR014735 Transposase, Tn5-like, N-terminal VM_06355 IPR014736 Transposase, Tn5-like, core VM_06355 IPR014737 Transposase, Tn5-like, C-terminal VM_06355 IPR038215 VM_06355 VM_06360 IPR003848 Domain of unknown function DUF218 VM_06365 IPR013216 Methyltransferase type 11 VM_06365 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VM_06365 IPR033664 VM_06365 VM_06370 IPR005582 Chromosome partition protein MukF VM_06370 IPR033439 VM_06370 VM_06370 IPR033440 VM_06370 VM_06370 IPR033441 VM_06370 VM_06370 IPR036141 VM_06370 VM_06370 IPR036388 VM_06370 VM_06370 IPR036390 VM_06370 VM_06370 IPR038198 VM_06370 VM_06375 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE VM_06380 IPR007406 MukB, N-terminal domain VM_06380 IPR012090 Chromosome partition protein MukB VM_06380 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_06380 IPR032520 VM_06380 VM_06385 IPR000485 AsnC-type HTH domain VM_06385 IPR011008 Dimeric alpha-beta barrel VM_06385 IPR019887 Transcription regulator AsnC-type, C-terminal VM_06385 IPR019888 Transcription regulator AsnC-type VM_06385 IPR036388 VM_06385 VM_06385 IPR036390 VM_06385 VM_06390 IPR001123 Lysine-type exporter protein (LYSE/YGGA) VM_06395 IPR006638 Elongator protein 3/MiaB/NifB VM_06395 IPR007197 Radical SAM VM_06395 IPR013704 Uncharacterised protein family UPF0313, N-terminal VM_06395 IPR020612 Methylthiotransferase, conserved site VM_06395 IPR022946 Uncharacterised protein family UPF0313 VM_06395 IPR023404 Radical SAM, alpha/beta horseshoe VM_06395 IPR024560 Uncharacterised protein family UPF0313, C-terminal VM_06400 IPR000014 PAS domain VM_06400 IPR001633 EAL domain VM_06400 IPR035919 VM_06400 VM_06400 IPR035965 VM_06400 VM_06405 IPR001431 Peptidase M16, zinc-binding site VM_06405 IPR007863 Peptidase M16, C-terminal domain VM_06405 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like VM_06405 IPR011765 Peptidase M16, N-terminal VM_06415 IPR025346 Protein of unknown function DUF4250 VM_06420 IPR000847 Transcription regulator HTH, LysR VM_06420 IPR005119 LysR, substrate-binding VM_06420 IPR036388 VM_06420 VM_06420 IPR036390 VM_06420 VM_06425 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal VM_06425 IPR006276 Cobalamin-independent methionine synthase VM_06425 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal VM_06425 IPR038071 VM_06425 VM_06430 IPR016502 Uncharacterised conserved protein UCP007010 VM_06435 IPR005545 YCII-related VM_06435 IPR011008 Dimeric alpha-beta barrel VM_06440 IPR006683 Thioesterase superfamily VM_06440 IPR029069 HotDog domain VM_06445 IPR006008 Intracellular septation protein A VM_06450 IPR000160 GGDEF domain VM_06450 IPR001633 EAL domain VM_06450 IPR003018 GAF domain VM_06450 IPR029016 GAF domain-like VM_06450 IPR029787 Nucleotide cyclase VM_06450 IPR035919 VM_06450 VM_06460 IPR003848 Domain of unknown function DUF218 VM_06460 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_06465 IPR016040 NAD(P)-binding domain VM_06465 IPR036291 VM_06465 VM_06470 IPR013468 Conserved hypothetical protein CHP02647 VM_06470 IPR020948 Phosphate-starvation-induced PsiE-like VM_06475 IPR000292 Formate/nitrite transporter VM_06475 IPR023271 Aquaporin-like VM_06475 IPR023999 Formate transporter FocA, putative VM_06475 IPR024002 Formate/nitrite transporter, conserved site VM_06485 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE VM_06485 IPR014316 Trimethylamine N-oxide reductase system, TorE VM_06490 IPR005126 NapC/NirT cytochrome c, N-terminal VM_06490 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK VM_06490 IPR036280 VM_06490 VM_06490 IPR038266 VM_06490 VM_06495 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site VM_06495 IPR006656 Molybdopterin oxidoreductase VM_06495 IPR006657 Molydopterin dinucleotide-binding domain VM_06495 IPR009010 Aspartate decarboxylase-like domain VM_06495 IPR011887 Trimethylamine-N-oxide reductase TorA VM_06495 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VM_06500 IPR001584 Integrase, catalytic core VM_06500 IPR009057 Homeodomain-like VM_06500 IPR012337 Ribonuclease H-like domain VM_06500 IPR036397 VM_06500 VM_06505 IPR002252 Glycoside hydrolase, family 36 VM_06505 IPR013785 Aldolase-type TIM barrel VM_06505 IPR017853 Glycoside hydrolase, superfamily VM_06510 IPR004881 Ribosome biogenesis GTPase RsgA, putative VM_06510 IPR010914 EngC GTPase VM_06510 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_06515 IPR021552 Protein of unknown function DUF2899 VM_06520 IPR001667 DDH domain VM_06520 IPR004097 DHHA2 domain VM_06520 IPR038222 VM_06520 VM_06520 IPR038763 VM_06520 VM_06525 IPR021284 Protein of unknown function DUF2750 VM_06530 IPR021323 Protein of unknown function DUF2927 VM_06535 IPR003439 ABC transporter-like VM_06535 IPR003593 AAA+ ATPase domain VM_06535 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_06540 IPR003439 ABC transporter-like VM_06540 IPR003593 AAA+ ATPase domain VM_06540 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal VM_06540 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_06545 IPR000515 MetI-like domain VM_06545 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VM_06545 IPR035906 VM_06545 VM_06550 IPR000515 MetI-like domain VM_06550 IPR035906 VM_06550 VM_06555 IPR000914 Bacterial extracellular solute-binding protein, family 5 VM_06555 IPR030678 VM_06555 VM_06560 IPR002078 RNA polymerase sigma factor 54 interaction domain VM_06560 IPR002197 DNA binding HTH domain, Fis-type VM_06560 IPR003593 AAA+ ATPase domain VM_06560 IPR009057 Homeodomain-like VM_06560 IPR014317 Transcription activator PspF VM_06560 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VM_06560 IPR025944 Sigma-54 interaction domain, conserved site VM_06560 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_06565 IPR007157 PspA/IM30 VM_06565 IPR014319 Phage shock protein, PspA VM_06570 IPR009554 Phage shock protein, PspB VM_06575 IPR007168 Phage shock protein, PspC, N-terminal VM_06575 IPR014320 Phage shock protein, PspC VM_06580 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase VM_06580 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal VM_06580 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain VM_06580 IPR014362 Glutamate dehydrogenase VM_06580 IPR036291 VM_06580 VM_06585 IPR004597 DNA-3-methyladenine glycosylase I VM_06585 IPR005019 Methyladenine glycosylase VM_06585 IPR011257 DNA glycosylase VM_06590 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme VM_06590 IPR006233 Cystathionine beta-lyase, bacterial VM_06590 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VM_06590 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VM_06590 IPR015424 Pyridoxal phosphate-dependent transferase VM_06595 IPR001736 Phospholipase D/Transphosphatidylase VM_06595 IPR022924 Cardiolipin synthase VM_06595 IPR025202 Phospholipase D-like domain VM_06595 IPR027379 Cardiolipin synthase N-terminal VM_06595 IPR030840 VM_06595 VM_06600 IPR000175 Sodium:neurotransmitter symporter VM_06600 IPR037272 VM_06600 VM_06605 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F VM_06605 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site VM_06605 IPR006508 Pseudouridine synthase, RluA-like VM_06605 IPR020103 Pseudouridine synthase, catalytic domain VM_06610 IPR000462 CDP-alcohol phosphatidyltransferase VM_06615 IPR003439 ABC transporter-like VM_06615 IPR003593 AAA+ ATPase domain VM_06615 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_06620 IPR000515 MetI-like domain VM_06620 IPR035906 VM_06620 VM_06625 IPR006059 Bacterial extracellular solute-binding, family 1 VM_06625 IPR027020 Protein ynjB VM_06630 IPR005184 Domain of unknown function DUF306, Meta/HslJ VM_06630 IPR038670 VM_06630 VM_06635 IPR010710 Protein of unknown function DUF1289 VM_06645 IPR000412 ABC-2 transporter VM_06650 IPR003439 ABC transporter-like VM_06650 IPR003593 AAA+ ATPase domain VM_06650 IPR017871 ABC transporter, conserved site VM_06650 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_06660 IPR018227 Tryptophan/tyrosine permease VM_06665 IPR000620 Drug/metabolite transporter VM_06670 IPR000644 CBS domain VM_06670 IPR006667 SLC41 divalent cation transporters, integral membrane domain VM_06670 IPR006669 Magnesium transporter MgtE VM_06670 IPR036739 VM_06670 VM_06670 IPR038048 VM_06670 VM_06675 IPR001638 Extracellular solute-binding protein, family 3 VM_06675 IPR001789 Signal transduction response regulator, receiver domain VM_06675 IPR003594 Histidine kinase-like ATPase, C-terminal domain VM_06675 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain VM_06675 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_06675 IPR011006 CheY-like superfamily VM_06675 IPR036097 VM_06675 VM_06675 IPR036641 VM_06675 VM_06675 IPR036890 VM_06675 VM_06680 IPR000792 Transcription regulator LuxR, C-terminal VM_06680 IPR001633 EAL domain VM_06680 IPR001789 Signal transduction response regulator, receiver domain VM_06680 IPR011006 CheY-like superfamily VM_06680 IPR016032 Signal transduction response regulator, C-terminal effector VM_06680 IPR035919 VM_06680 VM_06680 IPR036388 VM_06680 VM_06685 IPR001789 Signal transduction response regulator, receiver domain VM_06685 IPR011006 CheY-like superfamily VM_06685 IPR011990 Tetratricopeptide-like helical domain VM_06685 IPR014460 Signal transduction response regulator, predicted, VieB VM_06690 IPR002169 Peptidase M9A/M9B, collagenase, bacterial VM_06690 IPR007280 Peptidase, C-terminal, archaeal/bacterial VM_06690 IPR013661 Peptidase M9, collagenase, N-terminal domain VM_06695 IPR010583 MltA-interacting MipA VM_06700 IPR000914 Bacterial extracellular solute-binding protein, family 5 VM_06700 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain VM_06710 IPR006439 HAD hydrolase, subfamily IA VM_06710 IPR023198 Phosphoglycolate phosphatase, domain 2 VM_06710 IPR023214 HAD-like domain VM_06710 IPR036412 VM_06710 VM_06715 IPR021452 Protein of unknown function DUF3103 VM_06720 IPR003660 HAMP linker domain VM_06720 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_06720 IPR004090 Chemotaxis methyl-accepting receptor VM_06720 IPR024478 4HB MCP domain VM_06730 IPR001451 Bacterial transferase hexapeptide repeat VM_06730 IPR011004 Trimeric LpxA-like VM_06730 IPR018357 Hexapeptide transferase, conserved site VM_06735 IPR022253 Ribosome recycling factor. bacterial VM_06740 IPR001036 Acriflavin resistance protein VM_06740 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VM_06745 IPR006143 RND efflux pump, membrane fusion protein VM_06745 IPR032317 VM_06745 VM_06750 IPR013517 FG-GAP repeat VM_06750 IPR013519 Integrin alpha beta-propellor VM_06750 IPR028994 VM_06750 VM_06755 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain VM_06755 IPR020055 Ribosomal protein L25, short-form VM_06755 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain VM_06755 IPR029751 Ribosomal protein L25 VM_06760 IPR003594 Histidine kinase-like ATPase, C-terminal domain VM_06760 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_06760 IPR036097 VM_06760 VM_06760 IPR036890 VM_06760 VM_06765 IPR001789 Signal transduction response regulator, receiver domain VM_06765 IPR001867 Signal transduction response regulator, C-terminal VM_06765 IPR011006 CheY-like superfamily VM_06765 IPR016032 Signal transduction response regulator, C-terminal effector VM_06765 IPR036388 VM_06765 VM_06775 IPR001650 Helicase, C-terminal VM_06775 IPR006935 Helicase/UvrB domain VM_06775 IPR011332 Zinc-binding ribosomal protein VM_06775 IPR014001 Helicase, superfamily 1/2, ATP-binding domain VM_06775 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_06780 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F VM_06780 IPR002942 RNA-binding S4 domain VM_06780 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F VM_06780 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site VM_06780 IPR020103 Pseudouridine synthase, catalytic domain VM_06780 IPR036986 VM_06780 VM_06790 IPR021316 Protein of unknown function DUF2913 VM_06795 IPR016040 NAD(P)-binding domain VM_06795 IPR021295 Protein of unknown function DUF2867 VM_06795 IPR036291 VM_06795 VM_06800 IPR002528 Multi antimicrobial extrusion protein VM_06805 IPR003439 ABC transporter-like VM_06805 IPR003593 AAA+ ATPase domain VM_06805 IPR017871 ABC transporter, conserved site VM_06805 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_06810 IPR003838 Permease FtsX-like VM_06815 IPR010791 Hydroxyneurosporene synthase VM_06815 IPR023374 AttH-like domain VM_06820 IPR004670 Na+/H+ antiporter NhaA VM_06820 IPR023171 Na/H antiporter domain VM_06825 IPR002686 Transposase IS200-like VM_06825 IPR036515 VM_06825 VM_06830 IPR002129 Pyridoxal phosphate-dependent decarboxylase VM_06830 IPR004637 2,4-diaminobutyrate 4-transaminase VM_06830 IPR005814 Aminotransferase class-III VM_06830 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VM_06830 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VM_06830 IPR015424 Pyridoxal phosphate-dependent transferase VM_06830 IPR021115 Pyridoxal-phosphate binding site VM_06835 IPR005097 Saccharopine dehydrogenase / Homospermidine synthase VM_06835 IPR032095 VM_06835 VM_06835 IPR036291 VM_06835 VM_06840 IPR005730 Carboxynorspermidine decarboxylase VM_06840 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal VM_06840 IPR029066 PLP-binding barrel VM_06845 IPR006664 Outer membrane protein, bacterial VM_06845 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal VM_06845 IPR028974 TSP type-3 repeat VM_06845 IPR036737 VM_06845 VM_06850 IPR003423 Outer membrane efflux protein VM_06850 IPR010130 Type I secretion outer membrane protein, TolC VM_06855 IPR001343 Haemolysin-type calcium-binding repeat VM_06855 IPR002035 von Willebrand factor, type A VM_06855 IPR011049 Serralysin-like metalloprotease, C-terminal VM_06855 IPR013858 Peptidase M10 serralysin C-terminal domain VM_06855 IPR018511 Hemolysin-type calcium-binding conserved site VM_06855 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass VM_06855 IPR036465 VM_06855 VM_06860 IPR002559 Transposase, IS4-like VM_06860 IPR003201 Transposase Tn5, dimerisation VM_06860 IPR012337 Ribonuclease H-like domain VM_06860 IPR014735 Transposase, Tn5-like, N-terminal VM_06860 IPR014736 Transposase, Tn5-like, core VM_06860 IPR014737 Transposase, Tn5-like, C-terminal VM_06860 IPR038215 VM_06860 VM_06865 IPR009858 Protein of unknown function DUF1415 VM_06870 IPR011701 Major facilitator superfamily VM_06870 IPR036259 VM_06870 VM_06875 IPR000847 Transcription regulator HTH, LysR VM_06875 IPR005119 LysR, substrate-binding VM_06875 IPR036388 VM_06875 VM_06875 IPR036390 VM_06875 VM_06880 IPR002109 Glutaredoxin VM_06880 IPR011767 Glutaredoxin active site VM_06880 IPR036249 VM_06880 VM_06885 IPR002725 Protein of unknown function DUF45 VM_06890 IPR010286 Ribosomal RNA large subunit methyltransferase F-like VM_06890 IPR016909 Ribosomal RNA large subunit methyltransferase F VM_06890 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VM_06900 IPR003107 HAT (Half-A-TPR) repeat VM_06900 IPR011990 Tetratricopeptide-like helical domain VM_06900 IPR013360 Pilus biogenesis/stability type IV, PilW VM_06900 IPR019734 Tetratricopeptide repeat VM_06905 IPR005697 Homoserine O-succinyltransferase VM_06905 IPR029062 Class I glutamine amidotransferase-like VM_06905 IPR033752 VM_06905 VM_06910 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_06925 IPR032317 VM_06925 VM_06930 IPR003423 Outer membrane efflux protein VM_06940 IPR000014 PAS domain VM_06940 IPR003594 Histidine kinase-like ATPase, C-terminal domain VM_06940 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_06940 IPR013767 PAS fold VM_06940 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB VM_06940 IPR029151 Periplasmic sensor domain-like VM_06940 IPR033463 VM_06940 VM_06940 IPR035965 VM_06940 VM_06940 IPR036890 VM_06940 VM_06940 IPR039506 VM_06940 VM_06945 IPR001789 Signal transduction response regulator, receiver domain VM_06945 IPR011006 CheY-like superfamily VM_06945 IPR024187 Signal transduction response regulator, citrate/malate metabolism VM_06945 IPR028141 Transcriptional regulator VM_06955 IPR001789 Signal transduction response regulator, receiver domain VM_06955 IPR002545 CheW-like protein VM_06955 IPR011006 CheY-like superfamily VM_06955 IPR024181 Chemotaxis response regulator CheV VM_06955 IPR036061 VM_06955 VM_06965 IPR014538 Uncharacterised conserved protein, topoisomerase zinc finger VM_06965 IPR024402 Domain of unknown function DUF2726 VM_06970 IPR000160 GGDEF domain VM_06970 IPR029787 Nucleotide cyclase VM_06985 IPR005829 Sugar transporter, conserved site VM_06985 IPR011701 Major facilitator superfamily VM_06985 IPR036259 VM_06985 VM_06990 IPR001937 Galactose-1-phosphate uridyl transferase, class I VM_06990 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal VM_06990 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal VM_06990 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site VM_06990 IPR036265 VM_06990 VM_06995 IPR000705 Galactokinase VM_06995 IPR006203 GHMP kinase, ATP-binding, conserved site VM_06995 IPR006204 GHMP kinase N-terminal domain VM_06995 IPR006206 Mevalonate/galactokinase VM_06995 IPR013750 GHMP kinase, C-terminal domain VM_06995 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VM_06995 IPR019539 Galactokinase galactose-binding domain VM_06995 IPR019741 Galactokinase, conserved site VM_06995 IPR020568 Ribosomal protein S5 domain 2-type fold VM_06995 IPR022963 Galactokinase, bacterial VM_06995 IPR036554 VM_06995 VM_07000 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase VM_07000 IPR011013 Galactose mutarotase-like domain VM_07000 IPR013458 Aldose 1-epimerase, bacterial VM_07000 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup VM_07000 IPR015443 Aldose 1-epimerase VM_07000 IPR018052 Aldose 1-epimerase, conserved site VM_07005 IPR000933 Glycoside hydrolase, family 29 VM_07005 IPR013780 Glycosyl hydrolase, family 13, all-beta VM_07005 IPR016286 Alpha-L-fucosidase, metazoa-type VM_07005 IPR017853 Glycoside hydrolase, superfamily VM_07010 IPR025385 Domain of unknown function DUF4092 VM_07010 IPR031161 VM_07010 VM_07010 IPR035423 VM_07010 VM_07015 IPR007339 Protein of unknown function DUF417 VM_07015 IPR016865 Uncharacterised conserved protein UCP028065, membrane VM_07020 IPR002226 Catalase haem-binding site VM_07020 IPR010582 Catalase immune-responsive domain VM_07020 IPR011614 Catalase core domain VM_07020 IPR018028 Catalase, mono-functional, haem-containing VM_07020 IPR020835 Catalase-like domain VM_07020 IPR024708 Catalase active site VM_07020 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 VM_07020 IPR037060 VM_07020 VM_07025 IPR002110 Ankyrin repeat VM_07025 IPR020683 Ankyrin repeat-containing domain VM_07025 IPR036770 VM_07025 VM_07030 IPR001424 Superoxide dismutase, copper/zinc binding domain VM_07030 IPR018152 Superoxide dismutase, copper/zinc, binding site VM_07030 IPR036423 VM_07030 VM_07035 IPR007374 ASCH domain VM_07035 IPR008314 Uncharacterised conserved protein UCP029143 VM_07035 IPR015947 PUA-like domain VM_07040 IPR021125 Protein of unknown function DUF2127 VM_07045 IPR007437 Protein of unknown function DUF486 VM_07055 IPR000362 Fumarate lyase family VM_07055 IPR005677 Fumarate hydratase, class II VM_07055 IPR008948 L-Aspartase-like VM_07055 IPR018951 Fumarase C, C-terminal VM_07055 IPR020557 Fumarate lyase, conserved site VM_07055 IPR022761 Fumarate lyase, N-terminal VM_07055 IPR024083 Fumarase/histidase, N-terminal VM_07065 IPR000361 FeS cluster biogenesis VM_07065 IPR016092 FeS cluster insertion protein VM_07065 IPR017870 FeS cluster insertion, C-terminal, conserved site VM_07065 IPR035903 VM_07065 VM_07070 IPR000825 SUF system FeS cluster assembly, SufBD VM_07070 IPR010231 SUF system FeS cluster assembly, SufB VM_07070 IPR037284 VM_07070 VM_07075 IPR003439 ABC transporter-like VM_07075 IPR003593 AAA+ ATPase domain VM_07075 IPR010230 FeS cluster assembly SUF system, ATPase SufC VM_07075 IPR017871 ABC transporter, conserved site VM_07075 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_07080 IPR000825 SUF system FeS cluster assembly, SufBD VM_07080 IPR011542 SUF system FeS cluster assembly, SufD VM_07080 IPR037284 VM_07080 VM_07085 IPR000192 Aminotransferase class V domain VM_07085 IPR010970 Cysteine desulfurase, SufS VM_07085 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VM_07085 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VM_07085 IPR015424 Pyridoxal phosphate-dependent transferase VM_07085 IPR016454 Cysteine desulfurase, NifS VM_07085 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site VM_07090 IPR003808 Fe-S metabolism associated domain, SufE-like VM_07095 IPR002109 Glutaredoxin VM_07095 IPR011909 Glutaredoxin-like protein NrdH VM_07095 IPR036249 VM_07095 VM_07100 IPR004465 Ribonucleotide reductase Class Ib, NrdI VM_07100 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial VM_07100 IPR029039 Flavoprotein-like VM_07105 IPR000788 Ribonucleotide reductase large subunit, C-terminal VM_07105 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal VM_07105 IPR013346 Ribonucleotide reductase, class I , alpha subunit VM_07105 IPR013509 Ribonucleotide reductase large subunit, N-terminal VM_07105 IPR013554 Ribonucleotide reductase N-terminal VM_07105 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE VM_07110 IPR000358 Ribonucleotide reductase small subunit VM_07110 IPR009078 Ferritin-like superfamily VM_07110 IPR012348 Ribonucleotide reductase-related VM_07110 IPR026494 Ribonucleoside reductase subunit beta, NrdF VM_07110 IPR030475 VM_07110 VM_07115 IPR003439 ABC transporter-like VM_07115 IPR003593 AAA+ ATPase domain VM_07115 IPR017871 ABC transporter, conserved site VM_07115 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_07120 IPR003838 Permease FtsX-like VM_07120 IPR025857 MacB-like periplasmic core domain VM_07125 IPR003838 Permease FtsX-like VM_07125 IPR025857 MacB-like periplasmic core domain VM_07130 IPR003423 Outer membrane efflux protein VM_07135 IPR006143 RND efflux pump, membrane fusion protein VM_07135 IPR032317 VM_07135 VM_07140 IPR001279 Beta-lactamase-like VM_07140 IPR036866 VM_07140 VM_07145 IPR000847 Transcription regulator HTH, LysR VM_07145 IPR005119 LysR, substrate-binding VM_07145 IPR036388 VM_07145 VM_07145 IPR036390 VM_07145 VM_07150 IPR000763 Catalase-peroxidase haem VM_07150 IPR002016 Haem peroxidase, plant/fungal/bacterial VM_07150 IPR010255 Haem peroxidase VM_07150 IPR019794 Peroxidase, active site VM_07155 IPR001360 Glycoside hydrolase, family 1 VM_07155 IPR017853 Glycoside hydrolase, superfamily VM_07155 IPR018120 Glycoside hydrolase, family 1, active site VM_07155 IPR033132 VM_07155 VM_07160 IPR000843 Transcription regulator HTH, LacI VM_07160 IPR010982 Lambda repressor-like, DNA-binding domain VM_07160 IPR028082 Periplasmic binding protein-like I VM_07165 IPR006175 YjgF/Yer057p/UK114 family VM_07165 IPR035959 VM_07165 VM_07170 IPR004375 Conserved hypothetical protein CHP00022 VM_07170 IPR037012 VM_07170 VM_07175 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain VM_07175 IPR030395 VM_07175 VM_07180 IPR001034 HTH DeoR N-terminal domain VM_07180 IPR014036 DeoR C-terminal sensor domain VM_07180 IPR036388 VM_07180 VM_07180 IPR036390 VM_07180 VM_07180 IPR037171 VM_07180 VM_07185 IPR003439 ABC transporter-like VM_07185 IPR003593 AAA+ ATPase domain VM_07185 IPR008995 Molybdate/tungstate binding, C-terminal VM_07185 IPR017871 ABC transporter, conserved site VM_07185 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_07190 IPR000515 MetI-like domain VM_07190 IPR035906 VM_07190 VM_07195 IPR000515 MetI-like domain VM_07195 IPR035906 VM_07195 VM_07200 IPR006059 Bacterial extracellular solute-binding, family 1 VM_07210 IPR016866 Uncharacterised conserved protein UCP028069 VM_07215 IPR002898 MotA/TolQ/ExbB proton channel VM_07215 IPR017270 Outer membrane stability protein, TolR VM_07220 IPR002898 MotA/TolQ/ExbB proton channel VM_07225 IPR003400 Biopolymer transport protein ExbD/TolR VM_07230 IPR003538 Gram-negative bacterial TonB protein VM_07230 IPR006260 TonB, C-terminal VM_07230 IPR037682 VM_07230 VM_07235 IPR011990 Tetratricopeptide-like helical domain VM_07240 IPR012310 DNA ligase, ATP-dependent, central VM_07240 IPR012340 Nucleic acid-binding, OB-fold VM_07240 IPR016059 DNA ligase, ATP-dependent, conserved site VM_07240 IPR029319 DNA ligase, OB-like domain VM_07245 IPR021431 Protein of unknown function DUF3080 VM_07250 IPR002528 Multi antimicrobial extrusion protein VM_07255 IPR017143 Uncharacterised conserved protein UCP037225 VM_07255 IPR025990 Cysteine-rich CPXCG protein VM_07260 IPR011009 Protein kinase-like domain VM_07260 IPR016477 Fructosamine/Ketosamine-3-kinase VM_07265 IPR020979 Uncharacterised protein family A0KLC6 VM_07270 IPR000064 Endopeptidase, NLPC/P60 domain VM_07270 IPR038765 VM_07270 VM_07275 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_07280 IPR006694 Fatty acid hydroxylase VM_07285 IPR005636 DTW VM_07290 IPR000600 ROK VM_07290 IPR023505 N-acetyl-D-glucosamine kinase VM_07295 IPR021343 Protein of unknown function DUF2960 VM_07300 IPR001453 Molybdopterin binding domain VM_07300 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain VM_07300 IPR005110 MoeA, N-terminal and linker domain VM_07300 IPR005111 MoeA, C-terminal, domain IV VM_07300 IPR008284 Molybdenum cofactor biosynthesis, conserved site VM_07300 IPR012182 Bifunctional molybdenum cofactor biosynthesis MobB/MoeA VM_07300 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_07300 IPR036135 VM_07300 VM_07300 IPR036425 VM_07300 VM_07300 IPR036688 VM_07300 VM_07305 IPR013482 Molybdenum cofactor guanylyltransferase VM_07305 IPR025877 MobA-like NTP transferase domain VM_07305 IPR029044 Nucleotide-diphospho-sugar transferases VM_07310 IPR003439 ABC transporter-like VM_07310 IPR003593 AAA+ ATPase domain VM_07310 IPR017871 ABC transporter, conserved site VM_07310 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_07315 IPR000515 MetI-like domain VM_07315 IPR035906 VM_07315 VM_07320 IPR024370 PBP domain VM_07325 IPR001789 Signal transduction response regulator, receiver domain VM_07325 IPR002078 RNA polymerase sigma factor 54 interaction domain VM_07325 IPR002197 DNA binding HTH domain, Fis-type VM_07325 IPR003593 AAA+ ATPase domain VM_07325 IPR009057 Homeodomain-like VM_07325 IPR011006 CheY-like superfamily VM_07325 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VM_07325 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VM_07325 IPR025944 Sigma-54 interaction domain, conserved site VM_07325 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_07330 IPR003594 Histidine kinase-like ATPase, C-terminal domain VM_07330 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain VM_07330 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_07330 IPR029151 Periplasmic sensor domain-like VM_07330 IPR033463 VM_07330 VM_07330 IPR036097 VM_07330 VM_07330 IPR036890 VM_07330 VM_07335 IPR003439 ABC transporter-like VM_07335 IPR003593 AAA+ ATPase domain VM_07335 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_07335 IPR032781 VM_07335 VM_07340 IPR003660 HAMP linker domain VM_07340 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_07345 IPR003786 Protein FdhD VM_07345 IPR016193 Cytidine deaminase-like VM_07350 IPR021736 Protein of unknown function DUF3305 VM_07355 IPR021735 Protein of unknown function DUF3306 VM_07360 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VM_07360 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VM_07365 IPR020945 DMSO/Nitrate reductase chaperone VM_07365 IPR036411 VM_07365 VM_07370 IPR014177 Formate dehydrogenase, TAT signal-containing VM_07370 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VM_07375 IPR006656 Molybdopterin oxidoreductase VM_07375 IPR006657 Molydopterin dinucleotide-binding domain VM_07375 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain VM_07375 IPR009010 Aspartate decarboxylase-like domain VM_07375 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VM_07375 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site VM_07380 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VM_07380 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VM_07385 IPR006471 Formate dehydrogenase, gamma subunit VM_07385 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase VM_07385 IPR016174 Di-haem cytochrome, transmembrane VM_07395 IPR018047 Ammonium transporter, conserved site VM_07395 IPR024041 Ammonium transporter AmtB-like domain VM_07395 IPR029020 Ammonium/urea transporter VM_07400 IPR003000 Sirtuin family VM_07400 IPR026591 Sirtuin family, catalytic core small domain VM_07400 IPR027546 Sirtuin, class III VM_07400 IPR029035 DHS-like NAD/FAD-binding domain VM_07405 IPR007551 Protein of unknown function DUF520 VM_07405 IPR035570 VM_07405 VM_07405 IPR035571 VM_07405 VM_07405 IPR036183 VM_07405 VM_07410 IPR006218 DAHP synthetase I/KDSA VM_07410 IPR006219 DHAP synthase, class 1 VM_07410 IPR013785 Aldolase-type TIM barrel VM_07415 IPR027961 Protein of unknown function DUF4442 VM_07415 IPR029069 HotDog domain VM_07425 IPR014464 Conserved virulence factor B VM_07425 IPR022967 RNA-binding domain, S1 VM_07425 IPR036388 VM_07425 VM_07425 IPR039566 VM_07425 VM_07430 IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p VM_07430 IPR011023 Nop2p VM_07430 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site VM_07430 IPR023267 RNA (C5-cytosine) methyltransferase VM_07430 IPR023545 rRNA small subunit methyltransferase F VM_07430 IPR027391 rRNA small subunit methyltransferase F, C-terminal domain VM_07430 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VM_07430 IPR031341 VM_07430 VM_07435 IPR003399 Mammalian cell entry-related VM_07440 IPR005219 Conserved hypothetical protein CHP00155 VM_07440 IPR007498 Paraquat-inducible protein A VM_07445 IPR003439 ABC transporter-like VM_07445 IPR003593 AAA+ ATPase domain VM_07445 IPR011527 ABC transporter type 1, transmembrane domain VM_07445 IPR017871 ABC transporter, conserved site VM_07445 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_07445 IPR036640 VM_07445 VM_07450 IPR000614 Free Met sulfoxide reductase conserved site VM_07450 IPR003018 GAF domain VM_07450 IPR029016 GAF domain-like VM_07455 IPR016103 ProQ/FinO domain VM_07455 IPR023529 Transporter ProP effector, ProQ VM_07455 IPR035236 VM_07455 VM_07455 IPR036442 VM_07455 VM_07460 IPR001478 PDZ domain VM_07460 IPR004447 C-terminal-processing peptidase S41A VM_07460 IPR005151 Tail specific protease VM_07460 IPR012530 B melanoma antigen VM_07460 IPR020992 Tail specific protease, C-terminal VM_07460 IPR029045 ClpP/crotonase-like domain VM_07460 IPR036034 VM_07460 VM_07470 IPR012779 Peptidase M1, alanyl aminopeptidase VM_07470 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal VM_07470 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal VM_07470 IPR027268 VM_07470 VM_07470 IPR035414 VM_07470 VM_07470 IPR037144 VM_07470 VM_07470 IPR038438 VM_07470 VM_07475 IPR021363 Protein of unknown function DUF2835 VM_07480 IPR007780 Bacterial NAD-glutamate dehydrogenase VM_07480 IPR028971 NAD-glutamate dehydrogenase VM_07480 IPR036291 VM_07480 VM_07485 IPR001295 Dihydroorotate dehydrogenase, conserved site VM_07485 IPR005719 Dihydroorotate dehydrogenase, class 2 VM_07485 IPR005720 Dihydroorotate dehydrogenase domain VM_07485 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 VM_07485 IPR013785 Aldolase-type TIM barrel VM_07490 IPR009809 Cell division protein ZapC VM_07495 IPR000241 Putative RNA methylase domain VM_07495 IPR002052 DNA methylase, N-6 adenine-specific, conserved site VM_07495 IPR004114 THUMP VM_07495 IPR017244 Ribosomal RNA large subunit methyltransferase K/L VM_07495 IPR019614 S-adenosylmethionine-dependent methyltransferase VM_07495 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VM_07500 IPR008554 Glutaredoxin-like VM_07500 IPR036249 VM_07500 VM_07505 IPR003439 ABC transporter-like VM_07505 IPR003593 AAA+ ATPase domain VM_07505 IPR017871 ABC transporter, conserved site VM_07505 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_07505 IPR032524 VM_07505 VM_07505 IPR032781 VM_07505 VM_07505 IPR037118 VM_07505 VM_07510 IPR020008 GlyGly-CTERM domain VM_07510 IPR022562 Protein of unknown function DUF3466 VM_07515 IPR007040 Ribosome modulation factor VM_07515 IPR023200 Ribosome modulation factor-like domain VM_07520 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA VM_07520 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ VM_07520 IPR029069 HotDog domain VM_07525 IPR008269 Peptidase S16, Lon C-terminal VM_07525 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VM_07525 IPR020568 Ribosomal protein S5 domain 2-type fold VM_07530 IPR009390 Macrodomain Ter protein, MatP VM_07530 IPR013321 Arc-type ribbon-helix-helix VM_07530 IPR035087 VM_07530 VM_07530 IPR035375 VM_07530 VM_07530 IPR038339 VM_07530 VM_07535 IPR022090 Protein of unknown function DUF3634 VM_07545 IPR001789 Signal transduction response regulator, receiver domain VM_07545 IPR003594 Histidine kinase-like ATPase, C-terminal domain VM_07545 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain VM_07545 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_07545 IPR011006 CheY-like superfamily VM_07545 IPR036097 VM_07545 VM_07545 IPR036890 VM_07545 VM_07550 IPR013702 FIST domain, N-terminal VM_07550 IPR019494 FIST C domain VM_07560 IPR000883 Cytochrome c oxidase subunit I VM_07560 IPR004677 Cytochrome c oxidase cbb3-type, subunit I VM_07560 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site VM_07560 IPR036927 VM_07560 VM_07565 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO VM_07565 IPR036909 VM_07565 VM_07570 IPR008621 Cbb3-type cytochrome oxidase component VM_07575 IPR004678 Cytochrome c oxidase cbb3-type, subunit III VM_07575 IPR008168 Cytochrome c, class IC VM_07575 IPR009056 Cytochrome c-like domain VM_07575 IPR032858 VM_07575 VM_07575 IPR036909 VM_07575 VM_07575 IPR038414 VM_07575 VM_07580 IPR008620 FixH VM_07585 IPR001757 Cation-transporting P-type ATPase VM_07585 IPR006121 Heavy metal-associated domain, HMA VM_07585 IPR008250 P-type ATPase, A domain VM_07585 IPR018303 P-type ATPase, phosphorylation site VM_07585 IPR021993 Putative metal-binding domain of cation transport ATPase VM_07585 IPR023214 HAD-like domain VM_07585 IPR023298 P-type ATPase, transmembrane domain VM_07585 IPR023299 P-type ATPase, cytoplasmic domain N VM_07585 IPR027256 Cation-transporting P-type ATPase, subfamily IB VM_07585 IPR036163 VM_07585 VM_07585 IPR036412 VM_07585 VM_07590 IPR004714 Cytochrome oxidase maturation protein cbb3-type VM_07595 IPR039447 VM_07595 VM_07600 IPR000595 Cyclic nucleotide-binding domain VM_07600 IPR012318 Helix-turn-helix motif, Crp-type VM_07600 IPR014710 RmlC-like jelly roll fold VM_07600 IPR018335 Transcription regulator HTH, Crp-type, conserved site VM_07600 IPR018490 Cyclic nucleotide-binding-like VM_07600 IPR036388 VM_07600 VM_07600 IPR036390 VM_07600 VM_07605 IPR006016 UspA VM_07610 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase VM_07610 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA VM_07610 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_07610 IPR035107 VM_07610 VM_07615 IPR021370 Protein of unknown function DUF2987 VM_07620 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain VM_07630 IPR003439 ABC transporter-like VM_07630 IPR003593 AAA+ ATPase domain VM_07630 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit VM_07630 IPR008995 Molybdate/tungstate binding, C-terminal VM_07630 IPR013611 Transport-associated OB, type 2 VM_07630 IPR017871 ABC transporter, conserved site VM_07630 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_07635 IPR000515 MetI-like domain VM_07635 IPR035906 VM_07635 VM_07640 IPR000515 MetI-like domain VM_07640 IPR035906 VM_07640 VM_07645 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein VM_07645 IPR006059 Bacterial extracellular solute-binding, family 1 VM_07650 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein VM_07650 IPR006059 Bacterial extracellular solute-binding, family 1 VM_07655 IPR015590 Aldehyde dehydrogenase domain VM_07655 IPR016160 Aldehyde dehydrogenase, cysteine active site VM_07655 IPR016161 Aldehyde/histidinol dehydrogenase VM_07655 IPR016162 Aldehyde dehydrogenase, N-terminal VM_07655 IPR016163 Aldehyde dehydrogenase, C-terminal VM_07655 IPR029510 Aldehyde dehydrogenase, glutamic acid active site VM_07660 IPR000792 Transcription regulator LuxR, C-terminal VM_07660 IPR001789 Signal transduction response regulator, receiver domain VM_07660 IPR011006 CheY-like superfamily VM_07660 IPR036388 VM_07660 VM_07665 IPR013702 FIST domain, N-terminal VM_07665 IPR019494 FIST C domain VM_07670 IPR001789 Signal transduction response regulator, receiver domain VM_07670 IPR003594 Histidine kinase-like ATPase, C-terminal domain VM_07670 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain VM_07670 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_07670 IPR011006 CheY-like superfamily VM_07670 IPR035965 VM_07670 VM_07670 IPR036097 VM_07670 VM_07670 IPR036890 VM_07670 VM_07675 IPR000160 GGDEF domain VM_07675 IPR029787 Nucleotide cyclase VM_07690 IPR001463 Sodium:alanine symporter VM_07695 IPR001123 Lysine-type exporter protein (LYSE/YGGA) VM_07700 IPR021326 Protein of unknown function DUF2931 VM_07705 IPR018712 Domain of unknown function DUF2235 VM_07710 IPR025391 Domain of unknown function DUF4123 VM_07715 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein VM_07715 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset VM_07715 IPR037026 VM_07715 VM_07720 IPR008514 Type VI secretion system effector, Hcp VM_07720 IPR036624 VM_07720 VM_07725 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase VM_07730 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain VM_07730 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain VM_07730 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal VM_07730 IPR036250 VM_07730 VM_07730 IPR037069 VM_07730 VM_07735 IPR003313 AraC-type arabinose-binding/dimerisation domain VM_07735 IPR009057 Homeodomain-like VM_07735 IPR011983 4-hydroxyphenylacetate catabolism regulatory protein HpaA VM_07735 IPR014710 RmlC-like jelly roll fold VM_07735 IPR018060 DNA binding HTH domain, AraC-type VM_07735 IPR020449 Transcription regulator HTH, AraC- type VM_07735 IPR037923 VM_07735 VM_07740 IPR010102 Succinate semialdehyde dehydrogenase VM_07740 IPR015590 Aldehyde dehydrogenase domain VM_07740 IPR016160 Aldehyde dehydrogenase, cysteine active site VM_07740 IPR016161 Aldehyde/histidinol dehydrogenase VM_07740 IPR016162 Aldehyde dehydrogenase, N-terminal VM_07740 IPR016163 Aldehyde dehydrogenase, C-terminal VM_07740 IPR029510 Aldehyde dehydrogenase, glutamic acid active site VM_07745 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B VM_07745 IPR011984 3,4-dihydroxyphenylacetate 2,3-dioxygenase HpaD-Fe VM_07750 IPR004776 Auxin efflux carrier VM_07755 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase VM_07755 IPR014347 Tautomerase/MIF superfamily VM_07760 IPR011985 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase VM_07760 IPR015590 Aldehyde dehydrogenase domain VM_07760 IPR016161 Aldehyde/histidinol dehydrogenase VM_07760 IPR016162 Aldehyde dehydrogenase, N-terminal VM_07760 IPR016163 Aldehyde dehydrogenase, C-terminal VM_07760 IPR029510 Aldehyde dehydrogenase, glutamic acid active site VM_07765 IPR011234 Fumarylacetoacetase, C-terminal-related VM_07765 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit VM_07765 IPR036663 VM_07765 VM_07770 IPR011234 Fumarylacetoacetase, C-terminal-related VM_07770 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit VM_07770 IPR036663 VM_07770 VM_07775 IPR005000 HpcH/HpaI aldolase/citrate lyase domain VM_07775 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase VM_07775 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain VM_07780 IPR012690 2-oxo-hepta-3-ene-1,7-dioic acid hydratase VM_07780 IPR036663 VM_07780 VM_07785 IPR018389 Bacterial extracellular solute-binding protein, family 7 VM_07785 IPR038404 VM_07785 VM_07790 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component VM_07795 IPR004681 TRAP transporter permease protein VM_07795 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VM_07800 IPR000835 MarR-type HTH domain VM_07800 IPR012712 Homoprotocatechuate degradation transcriptional regulator HpaR VM_07800 IPR023187 Transcriptional regulator MarR-type, conserved site VM_07800 IPR036388 VM_07800 VM_07800 IPR036390 VM_07800 VM_07805 IPR002563 Flavin reductase-like, FMN-binding VM_07805 IPR011982 4-hydroxyphenylacetate 3-monooxygenase, reductase component VM_07805 IPR012349 FMN-binding split barrel VM_07810 IPR021529 Protein of unknown function DUF2798 VM_07815 IPR015590 Aldehyde dehydrogenase domain VM_07815 IPR016160 Aldehyde dehydrogenase, cysteine active site VM_07815 IPR016161 Aldehyde/histidinol dehydrogenase VM_07815 IPR016162 Aldehyde dehydrogenase, N-terminal VM_07815 IPR016163 Aldehyde dehydrogenase, C-terminal VM_07815 IPR029510 Aldehyde dehydrogenase, glutamic acid active site VM_07820 IPR002823 Protein of unknown function DUF112, transmembrane VM_07830 IPR005064 Bordetella uptake gene VM_07835 IPR006015 Universal stress protein A VM_07835 IPR006016 UspA VM_07835 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_07840 IPR006076 FAD dependent oxidoreductase VM_07840 IPR036188 VM_07840 VM_07845 IPR006175 YjgF/Yer057p/UK114 family VM_07845 IPR035959 VM_07845 VM_07850 IPR003462 Ornithine cyclodeaminase/mu-crystallin VM_07850 IPR023401 Ornithine cyclodeaminase, N-terminal VM_07850 IPR036291 VM_07850 VM_07855 IPR009057 Homeodomain-like VM_07855 IPR018060 DNA binding HTH domain, AraC-type VM_07855 IPR020449 Transcription regulator HTH, AraC- type VM_07860 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site VM_07860 IPR001650 Helicase, C-terminal VM_07860 IPR011545 DEAD/DEAH box helicase domain VM_07860 IPR014001 Helicase, superfamily 1/2, ATP-binding domain VM_07860 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_07865 IPR000014 PAS domain VM_07865 IPR001610 PAC motif VM_07865 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_07865 IPR013655 PAS fold-3 VM_07865 IPR013656 PAS fold-4 VM_07865 IPR035965 VM_07865 VM_07870 IPR003660 HAMP linker domain VM_07870 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_07870 IPR004090 Chemotaxis methyl-accepting receptor VM_07875 IPR000390 Small multidrug resistance protein family VM_07880 IPR011701 Major facilitator superfamily VM_07880 IPR036259 VM_07880 VM_07885 IPR000847 Transcription regulator HTH, LysR VM_07885 IPR005119 LysR, substrate-binding VM_07885 IPR036388 VM_07885 VM_07885 IPR036390 VM_07885 VM_07890 IPR013126 Heat shock protein 70 family VM_07890 IPR018181 Heat shock protein 70, conserved site VM_07895 IPR006680 Amidohydrolase 1 VM_07895 IPR011059 Metal-dependent hydrolase, composite domain VM_07895 IPR032466 VM_07895 VM_07900 IPR017136 Uncharacterised conserved protein UCP037205 VM_07905 IPR008979 Galactose-binding domain-like VM_07905 IPR013783 Immunoglobulin-like fold VM_07905 IPR017853 Glycoside hydrolase, superfamily VM_07905 IPR036156 VM_07905 VM_07910 IPR007140 Protein of unknown function DUF350 VM_07915 IPR009576 Biofilm formation YgiB VM_07920 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain VM_07920 IPR016185 Pre-ATP-grasp domain VM_07925 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel VM_07925 IPR027385 Outer membrane protein beta-barrel VM_07930 IPR001650 Helicase, C-terminal VM_07930 IPR003593 AAA+ ATPase domain VM_07930 IPR007502 Helicase-associated domain VM_07930 IPR010222 RNA helicase, ATP-dependent DEAH box, HrpA-type VM_07930 IPR011545 DEAD/DEAH box helicase domain VM_07930 IPR011709 Domain of unknown function DUF1605 VM_07930 IPR014001 Helicase, superfamily 1/2, ATP-binding domain VM_07930 IPR024590 RNA helicase, ATP-dependent DEAH box, HrpA, C-terminal VM_07930 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_07945 IPR007791 Heat shock protein DnaJ-like protein DjlA VM_07945 IPR029024 TerB-like VM_07955 IPR012337 Ribonuclease H-like domain VM_07955 IPR013520 Exonuclease, RNase T/DNA polymerase III VM_07955 IPR036397 VM_07955 VM_07960 IPR000160 GGDEF domain VM_07960 IPR006189 CHASE VM_07960 IPR029787 Nucleotide cyclase VM_07965 IPR021212 Domain of unknown function DUF2760 VM_07975 IPR013126 Heat shock protein 70 family VM_07975 IPR021030 Protein of unknown function DUF3731 VM_07980 IPR000160 GGDEF domain VM_07980 IPR029787 Nucleotide cyclase VM_07990 IPR000160 GGDEF domain VM_07990 IPR029787 Nucleotide cyclase VM_07995 IPR015168 SsuA/THI5-like VM_08005 IPR000160 GGDEF domain VM_08005 IPR011990 Tetratricopeptide-like helical domain VM_08005 IPR019734 Tetratricopeptide repeat VM_08005 IPR029787 Nucleotide cyclase VM_08010 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_08010 IPR018317 Queuosine biosynthesis protein QueC VM_08015 IPR007197 Radical SAM VM_08015 IPR013785 Aldolase-type TIM barrel VM_08015 IPR024924 7-carboxy-7-deazaguanine synthase-like VM_08015 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria VM_08020 IPR000150 Cof protein VM_08020 IPR006379 HAD-superfamily hydrolase, subfamily IIB VM_08020 IPR023214 HAD-like domain VM_08020 IPR036412 VM_08020 VM_08025 IPR006367 Sirohaem synthase, N-terminal VM_08025 IPR019478 Sirohaem synthase, dimerisation domain VM_08025 IPR035996 VM_08025 VM_08025 IPR036291 VM_08025 VM_08025 IPR037115 VM_08025 VM_08030 IPR001638 Extracellular solute-binding protein, family 3 VM_08035 IPR000515 MetI-like domain VM_08035 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family VM_08035 IPR035906 VM_08035 VM_08040 IPR000515 MetI-like domain VM_08040 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family VM_08040 IPR035906 VM_08040 VM_08045 IPR003439 ABC transporter-like VM_08045 IPR003593 AAA+ ATPase domain VM_08045 IPR017871 ABC transporter, conserved site VM_08045 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_08045 IPR030679 VM_08045 VM_08050 IPR006214 Bax inhibitor 1-related VM_08055 IPR007453 Sulphur transfer protein DsrC/TusE VM_08055 IPR025526 DsrC-like domain VM_08060 IPR001792 Acylphosphatase-like domain VM_08060 IPR017968 Acylphosphatase, conserved site VM_08060 IPR036046 VM_08060 VM_08065 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_08070 IPR002478 PUA domain VM_08070 IPR015947 PUA-like domain VM_08070 IPR019614 S-adenosylmethionine-dependent methyltransferase VM_08070 IPR023542 rRNA large subunit methyltransferase I VM_08070 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VM_08070 IPR036974 VM_08070 VM_08075 IPR000160 GGDEF domain VM_08075 IPR011110 Two component regulator propeller VM_08075 IPR011123 Two component regulator three Y VM_08075 IPR013783 Immunoglobulin-like fold VM_08075 IPR015943 WD40/YVTN repeat-like-containing domain VM_08075 IPR029787 Nucleotide cyclase VM_08080 IPR013740 Redoxin VM_08080 IPR036249 VM_08080 VM_08085 IPR000014 PAS domain VM_08085 IPR001789 Signal transduction response regulator, receiver domain VM_08085 IPR003594 Histidine kinase-like ATPase, C-terminal domain VM_08085 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain VM_08085 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_08085 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain VM_08085 IPR011006 CheY-like superfamily VM_08085 IPR013656 PAS fold-4 VM_08085 IPR035965 VM_08085 VM_08085 IPR036097 VM_08085 VM_08085 IPR036641 VM_08085 VM_08085 IPR036890 VM_08085 VM_08090 IPR001789 Signal transduction response regulator, receiver domain VM_08090 IPR003607 HD/PDEase domain VM_08090 IPR011006 CheY-like superfamily VM_08095 IPR004045 Glutathione S-transferase, N-terminal VM_08095 IPR004046 Glutathione S-transferase, C-terminal VM_08095 IPR005955 Maleylacetoacetate isomerase VM_08095 IPR036249 VM_08095 VM_08095 IPR036282 VM_08095 VM_08100 IPR011234 Fumarylacetoacetase, C-terminal-related VM_08100 IPR036663 VM_08100 VM_08105 IPR005708 Homogentisate 1,2-dioxygenase VM_08105 IPR011051 RmlC-like cupin domain VM_08105 IPR014710 RmlC-like jelly roll fold VM_08110 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VM_08110 IPR005956 4-hydroxyphenylpyruvate dioxygenase VM_08110 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VM_08115 IPR002933 Peptidase M20 VM_08115 IPR008007 Peptidase M42 VM_08115 IPR010162 Peptidase M20B, peptidase T VM_08115 IPR011650 Peptidase M20, dimerisation domain VM_08115 IPR036264 VM_08115 VM_08120 IPR000086 NUDIX hydrolase domain VM_08120 IPR015797 NUDIX hydrolase domain-like VM_08125 IPR000182 GNAT domain VM_08125 IPR016181 Acyl-CoA N-acyltransferase VM_08130 IPR000873 AMP-dependent synthetase/ligase VM_08130 IPR020845 AMP-binding, conserved site VM_08130 IPR025110 AMP-binding enzyme C-terminal domain VM_08130 IPR032387 VM_08130 VM_08135 IPR007400 PrpF protein VM_08135 IPR012709 PrpF, AcnD-accessory VM_08140 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel VM_08140 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha VM_08140 IPR006249 Aconitate/iron regulatory protein 2 VM_08140 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent VM_08140 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VM_08140 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 VM_08140 IPR036008 VM_08140 VM_08145 IPR002020 Citrate synthase-like VM_08145 IPR011278 2-methylcitrate synthase/citrate synthase type I VM_08145 IPR016142 Citrate synthase-like, large alpha subdomain VM_08145 IPR016143 Citrate synthase-like, small alpha subdomain VM_08145 IPR019810 Citrate synthase active site VM_08145 IPR024176 Citrate synthase, bacterial-type VM_08145 IPR036969 VM_08145 VM_08150 IPR012695 Methylisocitrate lyase VM_08150 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain VM_08150 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site VM_08155 IPR000524 Transcription regulator HTH, GntR VM_08155 IPR008920 Transcription regulator FadR/GntR, C-terminal VM_08155 IPR011711 GntR, C-terminal VM_08155 IPR036388 VM_08155 VM_08155 IPR036390 VM_08155 VM_08160 IPR001638 Extracellular solute-binding protein, family 3 VM_08160 IPR003607 HD/PDEase domain VM_08165 IPR005064 Bordetella uptake gene VM_08170 IPR009936 Protein of unknown function DUF1468 VM_08175 IPR002823 Protein of unknown function DUF112, transmembrane VM_08180 IPR000160 GGDEF domain VM_08180 IPR006189 CHASE VM_08180 IPR029787 Nucleotide cyclase VM_08185 IPR001851 ABC transporter, permease VM_08190 IPR003439 ABC transporter-like VM_08190 IPR003593 AAA+ ATPase domain VM_08190 IPR017871 ABC transporter, conserved site VM_08190 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_08195 IPR025997 Periplasmic binding protein domain VM_08195 IPR028082 Periplasmic binding protein-like I VM_08205 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis VM_08205 IPR036105 VM_08205 VM_08210 IPR007495 Protein of unknown function DUF539 VM_08215 IPR001264 Glycosyl transferase, family 51 VM_08215 IPR012338 Beta-lactamase/transpeptidase-like VM_08215 IPR023346 Lysozyme-like domain VM_08215 IPR036950 VM_08215 VM_08220 IPR001789 Signal transduction response regulator, receiver domain VM_08220 IPR001867 Signal transduction response regulator, C-terminal VM_08220 IPR011006 CheY-like superfamily VM_08220 IPR016032 Signal transduction response regulator, C-terminal effector VM_08220 IPR036388 VM_08220 VM_08225 IPR003594 Histidine kinase-like ATPase, C-terminal domain VM_08225 IPR003660 HAMP linker domain VM_08225 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain VM_08225 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_08225 IPR036097 VM_08225 VM_08225 IPR036890 VM_08225 VM_08230 IPR010583 MltA-interacting MipA VM_08235 IPR007488 Protein of unknown function DUF535 VM_08240 IPR001789 Signal transduction response regulator, receiver domain VM_08240 IPR011006 CheY-like superfamily VM_08245 IPR000595 Cyclic nucleotide-binding domain VM_08245 IPR003594 Histidine kinase-like ATPase, C-terminal domain VM_08245 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_08245 IPR014710 RmlC-like jelly roll fold VM_08245 IPR018490 Cyclic nucleotide-binding-like VM_08245 IPR036890 VM_08245 VM_08250 IPR001898 Sodium/sulphate symporter VM_08250 IPR030676 VM_08250 VM_08255 IPR003660 HAMP linker domain VM_08255 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_08255 IPR024478 4HB MCP domain VM_08260 IPR000821 Alanine racemase VM_08260 IPR001608 Alanine racemase, N-terminal VM_08260 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal VM_08260 IPR011079 Alanine racemase, C-terminal VM_08260 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site VM_08260 IPR029066 PLP-binding barrel VM_08265 IPR000620 Drug/metabolite transporter VM_08270 IPR002559 Transposase, IS4-like VM_08270 IPR003201 Transposase Tn5, dimerisation VM_08270 IPR012337 Ribonuclease H-like domain VM_08270 IPR014735 Transposase, Tn5-like, N-terminal VM_08270 IPR014736 Transposase, Tn5-like, core VM_08270 IPR014737 Transposase, Tn5-like, C-terminal VM_08270 IPR038215 VM_08270 VM_08275 IPR021334 Protein of unknown function DUF2947 VM_08280 IPR006674 HD domain VM_08285 IPR000182 GNAT domain VM_08285 IPR016181 Acyl-CoA N-acyltransferase VM_08290 IPR000014 PAS domain VM_08290 IPR002078 RNA polymerase sigma factor 54 interaction domain VM_08290 IPR003593 AAA+ ATPase domain VM_08290 IPR009057 Homeodomain-like VM_08290 IPR013767 PAS fold VM_08290 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VM_08290 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VM_08290 IPR025944 Sigma-54 interaction domain, conserved site VM_08290 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_08290 IPR030828 VM_08290 VM_08290 IPR035965 VM_08290 VM_08295 IPR006507 Uncharacterised protein family UPF0283 VM_08295 IPR021147 Protein of unknown function DUF697 VM_08300 IPR007413 Protein of unknown function DUF463, YcjX-like protein VM_08310 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain VM_08310 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain VM_08310 IPR011167 Iron-dependent fumarate hydratase VM_08310 IPR036660 VM_08310 VM_08315 IPR005801 ADC synthase VM_08315 IPR005802 Para-aminobenzoate synthase, component I VM_08315 IPR006805 Anthranilate synthase component I, N-terminal VM_08315 IPR015890 Chorismate binding, C-terminal VM_08315 IPR019999 Anthranilate synthase component I - like VM_08320 IPR000086 NUDIX hydrolase domain VM_08320 IPR015797 NUDIX hydrolase domain-like VM_08325 IPR018227 Tryptophan/tyrosine permease VM_08330 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form VM_08330 IPR005130 Serine dehydratase-like, alpha subunit VM_08330 IPR005131 Serine dehydratase beta chain VM_08330 IPR029009 Allosteric substrate binding domain VM_08335 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein VM_08335 IPR038418 VM_08335 VM_08340 IPR003660 HAMP linker domain VM_08340 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_08340 IPR004090 Chemotaxis methyl-accepting receptor VM_08345 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb VM_08345 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) VM_08345 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type VM_08345 IPR004522 Asparagine-tRNA ligase VM_08345 IPR012340 Nucleic acid-binding, OB-fold VM_08350 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase VM_08350 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase VM_08350 IPR029056 Ribokinase-like VM_08355 IPR001451 Bacterial transferase hexapeptide repeat VM_08355 IPR011004 Trimeric LpxA-like VM_08355 IPR018357 Hexapeptide transferase, conserved site VM_08360 IPR003607 HD/PDEase domain VM_08360 IPR003660 HAMP linker domain VM_08360 IPR006674 HD domain VM_08365 IPR000796 Aspartate/other aminotransferase VM_08365 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site VM_08365 IPR004839 Aminotransferase, class I/classII VM_08365 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VM_08365 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VM_08365 IPR015424 Pyridoxal phosphate-dependent transferase VM_08370 IPR000595 Cyclic nucleotide-binding domain VM_08370 IPR000644 CBS domain VM_08370 IPR005105 Protein-PII uridylyltransferase, N-terminal VM_08370 IPR014710 RmlC-like jelly roll fold VM_08370 IPR018490 Cyclic nucleotide-binding-like VM_08370 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding VM_08375 IPR012337 Ribonuclease H-like domain VM_08375 IPR013520 Exonuclease, RNase T/DNA polymerase III VM_08375 IPR036397 VM_08375 VM_08380 IPR003660 HAMP linker domain VM_08380 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_08380 IPR004090 Chemotaxis methyl-accepting receptor VM_08380 IPR029151 Periplasmic sensor domain-like VM_08380 IPR033479 VM_08380 VM_08385 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal VM_08385 IPR011013 Galactose mutarotase-like domain VM_08385 IPR013783 Immunoglobulin-like fold VM_08385 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D VM_08385 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup VM_08385 IPR014756 Immunoglobulin E-set VM_08385 IPR023704 Glucan biosynthesis protein G VM_08390 IPR023725 Glucan biosynthesis glucosyltransferase H VM_08390 IPR025993 Ceramide glucosyltransferase VM_08390 IPR029044 Nucleotide-diphospho-sugar transferases VM_08395 IPR000843 Transcription regulator HTH, LacI VM_08395 IPR010982 Lambda repressor-like, DNA-binding domain VM_08395 IPR028082 Periplasmic binding protein-like I VM_08400 IPR006879 Uncharacterised protein family UPF0249/HpnK VM_08400 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel VM_08400 IPR022948 Uncharacterised protein family UPF0249 VM_08405 IPR001088 Glycoside hydrolase, family 4 VM_08405 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal VM_08405 IPR019802 Glycoside hydrolase, family 4, conserved site VM_08405 IPR022616 Glycosyl hydrolase, family 4, C-terminal VM_08405 IPR036291 VM_08405 VM_08410 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit VM_08410 IPR036542 VM_08410 VM_08415 IPR003352 Phosphotransferase system, EIIC VM_08415 IPR004501 Phosphotransferase system, EIIC component, type 3 VM_08415 IPR004796 Phosphotransferase system, cellobiose-type IIC component VM_08420 IPR003501 Phosphotransferase system, EIIB component, type 2/3 VM_08420 IPR036095 VM_08420 VM_08425 IPR002509 Polysaccharide deacetylase VM_08425 IPR003610 Carbohydrate-binding module family 5/12 VM_08425 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel VM_08425 IPR036573 VM_08425 VM_08430 IPR000060 BCCT transporter family VM_08430 IPR018093 BCCT transporter, conserved site VM_08435 IPR000835 MarR-type HTH domain VM_08435 IPR036388 VM_08435 VM_08435 IPR036390 VM_08435 VM_08440 IPR000792 Transcription regulator LuxR, C-terminal VM_08440 IPR001789 Signal transduction response regulator, receiver domain VM_08440 IPR011006 CheY-like superfamily VM_08440 IPR016032 Signal transduction response regulator, C-terminal effector VM_08445 IPR003594 Histidine kinase-like ATPase, C-terminal domain VM_08445 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain VM_08445 IPR017171 Signal transduction histidine kinase, MctS VM_08445 IPR033480 VM_08445 VM_08445 IPR036890 VM_08445 VM_08450 IPR004681 TRAP transporter permease protein VM_08450 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VM_08455 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component VM_08460 IPR018389 Bacterial extracellular solute-binding protein, family 7 VM_08460 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like VM_08460 IPR038404 VM_08460 VM_08470 IPR021367 Protein of unknown function DUF2982 VM_08475 IPR001279 Beta-lactamase-like VM_08475 IPR036866 VM_08475 VM_08480 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain VM_08480 IPR010275 Protein of unknown function DUF882 VM_08480 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VM_08485 IPR002477 Peptidoglycan binding-like VM_08485 IPR005490 L,D-transpeptidase catalytic domain VM_08485 IPR036365 VM_08485 VM_08485 IPR038063 VM_08485 VM_08490 IPR008311 Uncharacterised conserved protein UCP028101 VM_08490 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like VM_08490 IPR015943 WD40/YVTN repeat-like-containing domain VM_08495 IPR018976 VM_08495 VM_08495 IPR038352 VM_08495 VM_08500 IPR010538 Protein of unknown function DUF1111 VM_08500 IPR036909 VM_08500 VM_08505 IPR018976 VM_08505 VM_08505 IPR038352 VM_08505 VM_08510 IPR002559 Transposase, IS4-like VM_08510 IPR003201 Transposase Tn5, dimerisation VM_08510 IPR012337 Ribonuclease H-like domain VM_08510 IPR014735 Transposase, Tn5-like, N-terminal VM_08510 IPR014736 Transposase, Tn5-like, core VM_08510 IPR014737 Transposase, Tn5-like, C-terminal VM_08510 IPR038215 VM_08510 VM_08515 IPR000926 GTP cyclohydrolase II, RibA VM_08515 IPR032677 VM_08515 VM_08515 IPR036144 VM_08515 VM_08525 IPR011701 Major facilitator superfamily VM_08525 IPR036259 VM_08525 VM_08530 IPR009057 Homeodomain-like VM_08530 IPR018060 DNA binding HTH domain, AraC-type VM_08535 IPR001763 Rhodanese-like domain VM_08535 IPR020936 Uncharacterised protein family UPF0176 VM_08535 IPR036873 VM_08535 VM_08540 IPR002059 Cold-shock protein, DNA-binding VM_08540 IPR011129 Cold shock protein VM_08540 IPR012156 Cold shock, CspA VM_08540 IPR012340 Nucleic acid-binding, OB-fold VM_08540 IPR019844 Cold-shock conserved site VM_08550 IPR005616 Cytochrome C biogenesis protein CcmH VM_08550 IPR017565 Formate-dependent nitrite reductase complex, subunit NrfF VM_08550 IPR038297 VM_08550 VM_08555 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE VM_08555 IPR013740 Redoxin VM_08555 IPR036249 VM_08555 VM_08560 IPR002541 Cytochrome c assembly protein VM_08560 IPR003567 Cytochrome c-type biogenesis protein VM_08560 IPR003568 Cytochrome c-type biogenesis protein CcmF VM_08560 IPR032523 VM_08560 VM_08565 IPR005614 NrfD family VM_08565 IPR017566 NrfD VM_08570 IPR017567 Cytochrome c nitrite reductase, Fe-S protein VM_08570 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VM_08570 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VM_08575 IPR010177 Doubled CXXCH motif VM_08575 IPR017564 Cytochrome c nitrite reductase, pentahaem subunit VM_08575 IPR036280 VM_08575 VM_08580 IPR003321 Cytochrome c552 VM_08580 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit VM_08580 IPR036280 VM_08580 VM_08585 IPR011990 Tetratricopeptide-like helical domain VM_08590 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal VM_08590 IPR005743 DNA gyrase, subunit A VM_08590 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel VM_08590 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain VM_08590 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta VM_08590 IPR013760 DNA topoisomerase, type IIA-like domain VM_08590 IPR035516 VM_08590 VM_08595 IPR010233 Ubiquinone biosynthesis O-methyltransferase VM_08595 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VM_08600 IPR000788 Ribonucleotide reductase large subunit, C-terminal VM_08600 IPR005144 ATP-cone VM_08600 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal VM_08600 IPR013346 Ribonucleotide reductase, class I , alpha subunit VM_08600 IPR013509 Ribonucleotide reductase large subunit, N-terminal VM_08605 IPR000358 Ribonucleotide reductase small subunit VM_08605 IPR009078 Ferritin-like superfamily VM_08605 IPR012348 Ribonucleotide reductase-related VM_08605 IPR030475 VM_08605 VM_08610 IPR001041 2Fe-2S ferredoxin-type domain VM_08610 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site VM_08610 IPR012675 Beta-grasp domain VM_08610 IPR036010 VM_08610 VM_08620 IPR001453 Molybdopterin binding domain VM_08620 IPR008135 Competence-induced protein CinA VM_08620 IPR036425 VM_08620 VM_08625 IPR025079 Domain of unknown function DUF3943 VM_08630 IPR016867 Glycine cleavage repressor GcvR VM_08635 IPR003660 HAMP linker domain VM_08635 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_08635 IPR033480 VM_08635 VM_08640 IPR021284 Protein of unknown function DUF2750 VM_08645 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like VM_08650 IPR003439 ABC transporter-like VM_08650 IPR003593 AAA+ ATPase domain VM_08650 IPR023693 ABC transporter, vitamin B12, BtuD VM_08650 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_08655 IPR000522 ABC transporter, permease protein VM_08655 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC VM_08655 IPR037294 VM_08655 VM_08660 IPR007036 Succinylglutamate desuccinylase/aspartoacylase VM_08660 IPR016681 Succinylglutamate desuccinylase VM_08665 IPR013078 Histidine phosphatase superfamily, clade-1 VM_08665 IPR029033 Histidine phosphatase superfamily VM_08670 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase VM_08670 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_08675 IPR003805 Cobalamin (vitamin B12) biosynthesis CobS, cobalamin-5-phosphate synthase VM_08680 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like VM_08680 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic VM_08680 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal VM_08680 IPR036087 VM_08680 VM_08685 IPR002579 Peptide methionine sulphoxide reductase MrsB VM_08685 IPR011057 Mss4-like VM_08690 IPR001991 Sodium:dicarboxylate symporter VM_08690 IPR036458 VM_08690 VM_08695 IPR012337 Ribonuclease H-like domain VM_08695 IPR013520 Exonuclease, RNase T/DNA polymerase III VM_08695 IPR013620 Exonuclease C-terminal VM_08695 IPR023607 Exodeoxyribonuclease I VM_08695 IPR036397 VM_08695 VM_08695 IPR038649 VM_08695 VM_08700 IPR005538 LrgA/CidA family VM_08700 IPR022957 Uncharacterised protein family UPF0299 VM_08705 IPR007300 CidB/LrgB family VM_08710 IPR002125 CMP/dCMP deaminase, zinc-binding VM_08710 IPR006263 Cytidine deaminase, homodimeric VM_08710 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain VM_08710 IPR016192 APOBEC/CMP deaminase, zinc-binding VM_08710 IPR016193 Cytidine deaminase-like VM_08710 IPR020797 Cytidine deaminase, bacteria VM_08715 IPR004776 Auxin efflux carrier VM_08720 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type VM_08720 IPR005862 Phosphoribosylglycinamide formyltransferase 2 VM_08720 IPR011054 Rudiment single hybrid motif VM_08720 IPR013815 ATP-grasp fold, subdomain 1 VM_08720 IPR016185 Pre-ATP-grasp domain VM_08725 IPR008854 TPMT family VM_08725 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification VM_08725 IPR025835 Thiopurine S-methyltransferase VM_08725 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VM_08730 IPR007685 RelA/SpoT VM_08740 IPR000119 Histone-like bacterial DNA-binding protein VM_08740 IPR005684 Integration host factor, alpha subunit VM_08740 IPR010992 Integration host factor (IHF)-like DNA-binding domain VM_08740 IPR020816 Histone-like DNA-binding protein, conserved site VM_08745 IPR002547 tRNA-binding domain VM_08745 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit VM_08745 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding VM_08745 IPR005146 B3/B4 tRNA-binding domain VM_08745 IPR005147 tRNA synthetase, B5-domain VM_08745 IPR009061 DNA binding domain, putative VM_08745 IPR012340 Nucleic acid-binding, OB-fold VM_08745 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 VM_08745 IPR036690 VM_08745 VM_08750 IPR002319 Phenylalanyl-tRNA synthetase VM_08750 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal VM_08750 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit VM_08750 IPR010978 tRNA-binding arm VM_08750 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial VM_08755 IPR000182 GNAT domain VM_08755 IPR016181 Acyl-CoA N-acyltransferase VM_08785 IPR000462 CDP-alcohol phosphatidyltransferase VM_08785 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase VM_08790 IPR000305 GIY-YIG nuclease superfamily VM_08790 IPR001162 UvrC family homology region VM_08790 IPR001943 UVR domain VM_08790 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 VM_08790 IPR004791 UvrABC system, subunit C VM_08790 IPR010994 RuvA domain 2-like VM_08790 IPR035901 VM_08790 VM_08790 IPR036876 VM_08790 VM_08790 IPR038476 VM_08790 VM_08795 IPR000792 Transcription regulator LuxR, C-terminal VM_08795 IPR001789 Signal transduction response regulator, receiver domain VM_08795 IPR011006 CheY-like superfamily VM_08795 IPR016032 Signal transduction response regulator, C-terminal effector VM_08800 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain VM_08800 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain VM_08800 IPR006172 DNA-directed DNA polymerase, family B VM_08800 IPR012337 Ribonuclease H-like domain VM_08800 IPR017964 DNA-directed DNA polymerase, family B, conserved site VM_08800 IPR023211 DNA polymerase, palm domain VM_08800 IPR036397 VM_08800 VM_08805 IPR001633 EAL domain VM_08805 IPR003352 Phosphotransferase system, EIIC VM_08805 IPR035919 VM_08805 VM_08810 IPR002934 Nucleotidyl transferase domain VM_08815 IPR001059 Translation elongation factor P/YeiP, central VM_08815 IPR008991 Translation protein SH3-like domain VM_08815 IPR011897 Translation elongation factor P-like, YeiP VM_08815 IPR012340 Nucleic acid-binding, OB-fold VM_08815 IPR013185 Translation elongation factor, KOW-like VM_08815 IPR013852 Translation elongation factor P/YeiP, conserved site VM_08815 IPR014722 Ribosomal protein L2 domain 2 VM_08815 IPR015365 Elongation factor P, C-terminal VM_08815 IPR020599 Translation elongation factor P/YeiP VM_08820 IPR007376 dsDNA mimic, putative VM_08820 IPR036763 VM_08820 VM_08825 IPR021523 Protein of unknown function DUF3187 VM_08830 IPR000524 Transcription regulator HTH, GntR VM_08830 IPR010248 Histidine utilization repressor VM_08830 IPR011663 UbiC transcription regulator-associated VM_08830 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain VM_08830 IPR036388 VM_08830 VM_08830 IPR036390 VM_08830 VM_08835 IPR005920 Imidazolonepropionase VM_08835 IPR006680 Amidohydrolase 1 VM_08835 IPR011059 Metal-dependent hydrolase, composite domain VM_08835 IPR032466 VM_08835 VM_08840 IPR005923 Formiminoglutamase VM_08840 IPR006035 Ureohydrolase VM_08840 IPR020855 Ureohydrolase, manganese-binding site VM_08840 IPR023696 Ureohydrolase domain VM_08845 IPR023636 Urocanase conserved site VM_08845 IPR023637 Urocanase VM_08845 IPR035085 VM_08845 VM_08845 IPR035400 VM_08845 VM_08845 IPR035401 VM_08845 VM_08845 IPR036190 VM_08845 VM_08845 IPR038364 VM_08845 VM_08850 IPR001106 Aromatic amino acid lyase VM_08850 IPR005921 Histidine ammonia-lyase VM_08850 IPR008948 L-Aspartase-like VM_08850 IPR022313 Phenylalanine/histidine ammonia-lyases, active site VM_08850 IPR024083 Fumarase/histidase, N-terminal VM_08855 IPR021974 Protein of unknown function DUF3581 VM_08860 IPR001254 Peptidase S1 VM_08860 IPR001314 Peptidase S1A, chymotrypsin-type VM_08860 IPR009003 Trypsin-like cysteine/serine peptidase domain VM_08860 IPR013783 Immunoglobulin-like fold VM_08860 IPR018114 Peptidase S1, trypsin family, active site VM_08860 IPR020008 GlyGly-CTERM domain VM_08860 IPR033116 VM_08860 VM_08865 IPR007318 Phospholipid methyltransferase VM_08870 IPR004113 FAD-linked oxidase, C-terminal VM_08870 IPR006094 FAD linked oxidase, N-terminal VM_08870 IPR009051 Alpha-helical ferredoxin VM_08870 IPR016164 FAD-linked oxidase-like, C-terminal VM_08870 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VM_08870 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VM_08870 IPR036318 VM_08870 VM_08875 IPR024513 Protein of unknown function DUF3334 VM_08875 IPR028976 CheC-like domain VM_08880 IPR016868 Bacteriophage B3, Orf5 VM_08880 IPR024498 Domain of unknown function DUF2786 VM_08885 IPR006664 Outer membrane protein, bacterial VM_08885 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal VM_08885 IPR036737 VM_08885 VM_08885 IPR039567 VM_08885 VM_08890 IPR006597 Sel1-like VM_08890 IPR011990 Tetratricopeptide-like helical domain VM_08890 IPR036869 VM_08890 VM_08900 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_08905 IPR014106 Phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio-type VM_08905 IPR018236 SAICAR synthetase, conserved site VM_08905 IPR028923 SAICAR synthetase/ADE2, N-terminal VM_08915 IPR001891 Malic oxidoreductase VM_08915 IPR012301 Malic enzyme, N-terminal domain VM_08915 IPR012302 Malic enzyme, NAD-binding VM_08915 IPR015884 Malic enzyme, conserved site VM_08915 IPR023667 NAD-dependent malic enzyme, proteobacteria VM_08915 IPR036291 VM_08915 VM_08915 IPR037062 VM_08915 VM_08920 IPR021813 Protein of unknown function DUF3392 VM_08925 IPR003848 Domain of unknown function DUF218 VM_08930 IPR000160 GGDEF domain VM_08930 IPR008979 Galactose-binding domain-like VM_08930 IPR029787 Nucleotide cyclase VM_08940 IPR018724 2OG-Fe dioxygenase VM_08945 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II VM_08945 IPR005982 Thioredoxin reductase VM_08945 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site VM_08945 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain VM_08945 IPR036188 VM_08945 VM_08950 IPR003439 ABC transporter-like VM_08950 IPR003593 AAA+ ATPase domain VM_08950 IPR011527 ABC transporter type 1, transmembrane domain VM_08950 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD VM_08950 IPR017871 ABC transporter, conserved site VM_08950 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_08950 IPR036640 VM_08950 VM_08955 IPR003439 ABC transporter-like VM_08955 IPR003593 AAA+ ATPase domain VM_08955 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC VM_08955 IPR017871 ABC transporter, conserved site VM_08955 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_08955 IPR036640 VM_08955 VM_08960 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F VM_08960 IPR002942 RNA-binding S4 domain VM_08960 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F VM_08960 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site VM_08960 IPR020103 Pseudouridine synthase, catalytic domain VM_08960 IPR036986 VM_08960 VM_08965 IPR006070 YrdC-like domain VM_08965 IPR017945 DHBP synthase RibB-like alpha/beta domain VM_08970 IPR003141 Polymerase/histidinol phosphatase, N-terminal VM_08970 IPR004013 PHP, C-terminal VM_08970 IPR016195 Polymerase/histidinol phosphatase-like VM_08975 IPR012639 Tryptophan operon leader peptide VM_08980 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial VM_08980 IPR005801 ADC synthase VM_08980 IPR006805 Anthranilate synthase component I, N-terminal VM_08980 IPR015890 Chorismate binding, C-terminal VM_08980 IPR019999 Anthranilate synthase component I - like VM_08985 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain VM_08985 IPR017926 Glutamine amidotransferase VM_08985 IPR029062 Class I glutamine amidotransferase-like VM_08990 IPR000312 Glycosyl transferase, family 3 VM_08990 IPR005940 Anthranilate phosphoribosyl transferase VM_08990 IPR017459 Glycosyl transferase family 3, N-terminal domain VM_08990 IPR035902 VM_08990 VM_08990 IPR036320 VM_08990 VM_08995 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) like domain VM_08995 IPR001468 Indole-3-glycerol phosphate synthase, conserved site VM_08995 IPR011060 Ribulose-phosphate binding barrel VM_08995 IPR013785 Aldolase-type TIM barrel VM_08995 IPR013798 Indole-3-glycerol phosphate synthase VM_09000 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VM_09000 IPR006653 Tryptophan synthase, beta chain, conserved site VM_09000 IPR006654 Tryptophan synthase, beta chain VM_09000 IPR023026 Tryptophan synthase beta chain/beta chain-like VM_09000 IPR036052 VM_09000 VM_09005 IPR002028 Tryptophan synthase, alpha chain VM_09005 IPR011060 Ribulose-phosphate binding barrel VM_09005 IPR013785 Aldolase-type TIM barrel VM_09005 IPR018204 Tryptophan synthase, alpha chain, active site VM_09010 IPR001991 Sodium:dicarboxylate symporter VM_09010 IPR036458 VM_09010 VM_09015 IPR002686 Transposase IS200-like VM_09015 IPR036515 VM_09015 VM_09020 IPR001267 Thymidine kinase VM_09020 IPR020633 Thymidine kinase, conserved site VM_09020 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_09025 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb VM_09025 IPR004115 GAD-like domain VM_09025 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) VM_09025 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type VM_09025 IPR004524 Aspartate-tRNA ligase, class IIb, bacterial/mitochondrial-type VM_09025 IPR012340 Nucleic acid-binding, OB-fold VM_09025 IPR029351 GAD domain VM_09030 IPR002763 Protein of unknown function DUF72 VM_09030 IPR036520 VM_09030 VM_09035 IPR005271 tRNA (cmo5U34)-methyltransferase VM_09035 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VM_09040 IPR010017 tRNA (mo5U34)-methyltransferase VM_09040 IPR027555 tRNA (mo5U34)-methyltransferase-like VM_09040 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VM_09045 IPR021109 Aspartic peptidase domain VM_09050 IPR025838 Inactive transglutaminase fused to 7 transmembrane helices VM_09050 IPR025840 7 transmembrane helices usually fused to an inactive transglutaminase VM_09055 IPR011758 Alpha-L-glutamate ligase-related protein VM_09055 IPR039523 VM_09055 VM_09060 IPR000192 Aminotransferase class V domain VM_09060 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VM_09060 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VM_09060 IPR015424 Pyridoxal phosphate-dependent transferase VM_09060 IPR022278 Phosphoserine aminotransferase VM_09065 IPR010352 Protein of unknown function DUF945 VM_09070 IPR000595 Cyclic nucleotide-binding domain VM_09070 IPR003594 Histidine kinase-like ATPase, C-terminal domain VM_09070 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain VM_09070 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_09070 IPR011006 CheY-like superfamily VM_09070 IPR014710 RmlC-like jelly roll fold VM_09070 IPR018490 Cyclic nucleotide-binding-like VM_09070 IPR036097 VM_09070 VM_09070 IPR036890 VM_09070 VM_09075 IPR001789 Signal transduction response regulator, receiver domain VM_09075 IPR011006 CheY-like superfamily VM_09090 IPR007076 TfoX, N-terminal VM_09090 IPR007077 TfoX, C-terminal VM_09090 IPR026256 Transcriptional regulator, TfoX/Sxy-type VM_09095 IPR013976 Metal-dependent hydrolase HDOD VM_09100 IPR005642 Protein of unknown function DUF340, prokaryotic membrane VM_09110 IPR002129 Pyridoxal phosphate-dependent decarboxylase VM_09110 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VM_09110 IPR015424 Pyridoxal phosphate-dependent transferase VM_09110 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent VM_09115 IPR000281 Helix-turn-helix protein RpiR VM_09115 IPR001347 Sugar isomerase (SIS) VM_09115 IPR009057 Homeodomain-like VM_09115 IPR036388 VM_09115 VM_09120 IPR001670 Alcohol dehydrogenase, iron-type VM_09130 IPR002109 Glutaredoxin VM_09130 IPR011902 Glutaredoxin, GrxA VM_09130 IPR014025 Glutaredoxin subgroup VM_09130 IPR036249 VM_09130 VM_09135 IPR006037 Regulator of K+ conductance, C-terminal VM_09135 IPR006512 YidE/YbjL duplication VM_09135 IPR023017 Transport protein YbjL, putative VM_09135 IPR036721 VM_09135 VM_09140 IPR001270 ClpA/B family VM_09140 IPR003593 AAA+ ATPase domain VM_09140 IPR003959 ATPase, AAA-type, core VM_09140 IPR004176 Clp, N-terminal VM_09140 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA VM_09140 IPR018368 ClpA/B, conserved site 1 VM_09140 IPR019489 Clp ATPase, C-terminal VM_09140 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_09140 IPR028299 ClpA/B, conserved site 2 VM_09140 IPR036628 VM_09140 VM_09145 IPR003769 Adaptor protein ClpS, core VM_09145 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VM_09145 IPR022935 ATP-dependent Clp protease adaptor protein ClpS VM_09150 IPR002059 Cold-shock protein, DNA-binding VM_09150 IPR011129 Cold shock protein VM_09150 IPR012156 Cold shock, CspA VM_09150 IPR012340 Nucleic acid-binding, OB-fold VM_09150 IPR012751 CspD, cold shock VM_09150 IPR019844 Cold-shock conserved site VM_09155 IPR002686 Transposase IS200-like VM_09155 IPR036515 VM_09155 VM_09160 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric VM_09165 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F VM_09165 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F VM_09165 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site VM_09165 IPR020103 Pseudouridine synthase, catalytic domain VM_09170 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain VM_09170 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase VM_09170 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like VM_09170 IPR023019 Histidine biosynthesis bifunctional protein HisIE VM_09170 IPR038019 VM_09170 VM_09175 IPR004651 Histidine biosynthesis, HisF VM_09175 IPR006062 Histidine biosynthesis VM_09175 IPR011060 Ribulose-phosphate binding barrel VM_09175 IPR013785 Aldolase-type TIM barrel VM_09180 IPR006062 Histidine biosynthesis VM_09180 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA VM_09180 IPR011060 Ribulose-phosphate binding barrel VM_09180 IPR013785 Aldolase-type TIM barrel VM_09180 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase VM_09185 IPR010139 Imidazole glycerol phosphate synthase, subunit H VM_09185 IPR017926 Glutamine amidotransferase VM_09185 IPR029062 Class I glutamine amidotransferase-like VM_09190 IPR000807 Imidazoleglycerol-phosphate dehydratase VM_09190 IPR005954 Histidinol-phosphatase VM_09190 IPR006543 Histidinol-phosphate phosphatase VM_09190 IPR006549 HAD-superfamily hydrolase,subfamily IIIA VM_09190 IPR013954 Polynucleotide kinase 3 phosphatase VM_09190 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site VM_09190 IPR020566 Histidine biosynthesis bifunctional protein HisB VM_09190 IPR020568 Ribosomal protein S5 domain 2-type fold VM_09190 IPR023214 HAD-like domain VM_09190 IPR036412 VM_09190 VM_09190 IPR038494 VM_09190 VM_09195 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site VM_09195 IPR004839 Aminotransferase, class I/classII VM_09195 IPR005861 Histidinol-phosphate aminotransferase family VM_09195 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VM_09195 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VM_09195 IPR015424 Pyridoxal phosphate-dependent transferase VM_09200 IPR001692 Histidinol dehydrogenase, conserved site VM_09200 IPR012131 Histidinol dehydrogenase VM_09200 IPR016161 Aldehyde/histidinol dehydrogenase VM_09200 IPR022695 Histidinol dehydrogenase, monofunctional VM_09205 IPR011322 Nitrogen regulatory PII-like, alpha/beta VM_09205 IPR013115 Histidine biosynthesis HisG, C-terminal VM_09205 IPR013820 ATP phosphoribosyltransferase, catalytic domain VM_09205 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VM_09205 IPR018198 ATP phosphoribosyltransferase, conserved site VM_09205 IPR020621 ATP phosphoribosyltransferase HisG, long form VM_09210 IPR018461 Na+/H+ antiporter, NhaC-like VM_09215 IPR001801 Histone-like protein H-NS VM_09215 IPR027444 Histone-like protein H-NS, C-terminal domain VM_09215 IPR027454 Histone-like protein H-NS family, oligomerisation domain VM_09215 IPR037150 VM_09215 VM_09220 IPR011611 Carbohydrate kinase PfkB VM_09220 IPR029056 Ribokinase-like VM_09225 IPR004506 tRNA-specific 2-thiouridylase VM_09225 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_09225 IPR023382 Adenine nucleotide alpha hydrolase-like domains VM_09230 IPR007451 Uncharacterised protein family UPF0274 VM_09230 IPR035932 VM_09230 VM_09235 IPR000362 Fumarate lyase family VM_09235 IPR004769 Adenylosuccinate lyase VM_09235 IPR008948 L-Aspartase-like VM_09235 IPR013539 Adenylosuccinate lyase PurB, C-terminal VM_09235 IPR020557 Fumarate lyase, conserved site VM_09235 IPR022761 Fumarate lyase, N-terminal VM_09235 IPR024083 Fumarase/histidase, N-terminal VM_09240 IPR016087 Chalcone isomerase VM_09245 IPR021306 Protein of unknown function DUF2878 VM_09250 IPR003333 Mycolic acid cyclopropane synthase VM_09250 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VM_09255 IPR010775 Protein of unknown function DUF1365 VM_09260 IPR002937 Amine oxidase VM_09260 IPR036188 VM_09260 VM_09265 IPR002347 Glucose/ribitol dehydrogenase VM_09265 IPR020904 Short-chain dehydrogenase/reductase, conserved site VM_09265 IPR036291 VM_09265 VM_09270 IPR032710 VM_09270 VM_09270 IPR037401 VM_09270 VM_09275 IPR001915 Peptidase M48 VM_09275 IPR022919 Peptidase M48, protease HtpX, putative VM_09285 IPR004472 Dethiobiotin synthase BioD VM_09285 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_09290 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC VM_09290 IPR013216 Methyltransferase type 11 VM_09290 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VM_09295 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site VM_09295 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type VM_09295 IPR004839 Aminotransferase, class I/classII VM_09295 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VM_09295 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VM_09295 IPR015424 Pyridoxal phosphate-dependent transferase VM_09295 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria VM_09300 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB VM_09300 IPR006638 Elongator protein 3/MiaB/NifB VM_09300 IPR007197 Radical SAM VM_09300 IPR010722 Biotin and thiamin synthesis-associated domain VM_09300 IPR013785 Aldolase-type TIM barrel VM_09300 IPR024177 Biotin synthase VM_09305 IPR005814 Aminotransferase class-III VM_09305 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA VM_09305 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VM_09305 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VM_09305 IPR015424 Pyridoxal phosphate-dependent transferase VM_09310 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain VM_09310 IPR002317 Serine-tRNA ligase, type1 VM_09310 IPR010978 tRNA-binding arm VM_09310 IPR015866 Serine-tRNA synthetase, type1, N-terminal VM_09315 IPR003593 AAA+ ATPase domain VM_09315 IPR003959 ATPase, AAA-type, core VM_09315 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal VM_09315 IPR021886 MgsA AAA+ ATPase C-terminal VM_09315 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_09315 IPR032423 VM_09315 VM_09320 IPR004564 Outer membrane lipoprotein carrier protein LolA-like VM_09320 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria VM_09320 IPR029046 Lipoprotein localisation LolA/LolB/LppX VM_09325 IPR004027 SEC-C motif VM_09325 IPR011978 Uncharacterised protein family UPF0149 VM_09330 IPR001269 tRNA-dihydrouridine synthase VM_09330 IPR013785 Aldolase-type TIM barrel VM_09330 IPR018517 tRNA-dihydrouridine synthase, conserved site VM_09330 IPR032886 VM_09330 VM_09335 IPR000160 GGDEF domain VM_09335 IPR029787 Nucleotide cyclase VM_09340 IPR003439 ABC transporter-like VM_09340 IPR003593 AAA+ ATPase domain VM_09340 IPR017871 ABC transporter, conserved site VM_09340 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_09345 IPR001851 ABC transporter, permease VM_09350 IPR007487 ABC transporter, substrate-binding protein VM_09350 IPR028082 Periplasmic binding protein-like I VM_09355 IPR018668 Protein of unknown function DUF2132 VM_09355 IPR036361 VM_09355 VM_09360 IPR007334 Uncharacterised protein family UPF0208 VM_09365 IPR000890 Aliphatic acid kinase, short-chain VM_09365 IPR004372 Acetate/Proprionate kinase VM_09365 IPR023865 Aliphatic acid kinase, short-chain, conserved site VM_09370 IPR002505 Phosphate acetyl/butaryl transferase VM_09370 IPR004614 Phosphate acetyltransferase VM_09370 IPR010766 DRTGG VM_09370 IPR016475 Phosphate acetyltransferase, bacteria VM_09370 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_09370 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain like VM_09375 IPR004045 Glutathione S-transferase, N-terminal VM_09375 IPR016639 Glutathione S-transferase (GST) VM_09375 IPR036249 VM_09375 VM_09375 IPR036282 VM_09375 VM_09380 IPR003439 ABC transporter-like VM_09380 IPR003593 AAA+ ATPase domain VM_09380 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal VM_09380 IPR017871 ABC transporter, conserved site VM_09380 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_09385 IPR003439 ABC transporter-like VM_09385 IPR003593 AAA+ ATPase domain VM_09385 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal VM_09385 IPR017871 ABC transporter, conserved site VM_09385 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_09390 IPR000515 MetI-like domain VM_09390 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VM_09390 IPR035906 VM_09390 VM_09395 IPR000515 MetI-like domain VM_09395 IPR035906 VM_09395 VM_09400 IPR000914 Bacterial extracellular solute-binding protein, family 5 VM_09400 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site VM_09400 IPR030678 VM_09400 VM_09410 IPR003594 Histidine kinase-like ATPase, C-terminal domain VM_09410 IPR003660 HAMP linker domain VM_09410 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_09410 IPR036890 VM_09410 VM_09415 IPR001789 Signal transduction response regulator, receiver domain VM_09415 IPR011006 CheY-like superfamily VM_09420 IPR001633 EAL domain VM_09420 IPR001789 Signal transduction response regulator, receiver domain VM_09420 IPR011006 CheY-like superfamily VM_09420 IPR035919 VM_09420 VM_09425 IPR003594 Histidine kinase-like ATPase, C-terminal domain VM_09425 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain VM_09425 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_09425 IPR036097 VM_09425 VM_09425 IPR036890 VM_09425 VM_09430 IPR003594 Histidine kinase-like ATPase, C-terminal domain VM_09430 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain VM_09430 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_09430 IPR013656 PAS fold-4 VM_09430 IPR036097 VM_09430 VM_09430 IPR036890 VM_09430 VM_09435 IPR007597 CheC-like protein VM_09435 IPR028976 CheC-like domain VM_09440 IPR001789 Signal transduction response regulator, receiver domain VM_09440 IPR011006 CheY-like superfamily VM_09445 IPR001789 Signal transduction response regulator, receiver domain VM_09445 IPR011006 CheY-like superfamily VM_09445 IPR013976 Metal-dependent hydrolase HDOD VM_09445 IPR014626 Signal transduction response regulator, modified HD-GYP domain-containing, putative VM_09450 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain VM_09450 IPR036641 VM_09450 VM_09455 IPR005145 Putative GTP-binding controlling metal-binding domain VM_09455 IPR006070 YrdC-like domain VM_09455 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 VM_09455 IPR017945 DHBP synthase RibB-like alpha/beta domain VM_09455 IPR038385 VM_09455 VM_09470 IPR009057 Homeodomain-like VM_09470 IPR018060 DNA binding HTH domain, AraC-type VM_09470 IPR018062 HTH domain AraC-type, conserved site VM_09475 IPR005247 YbhB/YbcL VM_09475 IPR008914 Phosphatidylethanolamine-binding protein PEBP VM_09475 IPR036610 VM_09475 VM_09480 IPR003675 CAAX amino terminal protease VM_09485 IPR001223 Glycoside hydrolase, family 18, catalytic domain VM_09485 IPR001579 Glycoside hydrolase, chitinase active site VM_09485 IPR003610 Carbohydrate-binding module family 5/12 VM_09485 IPR009470 Chitinase, C-terminal VM_09485 IPR011583 Chitinase II VM_09485 IPR013783 Immunoglobulin-like fold VM_09485 IPR017853 Glycoside hydrolase, superfamily VM_09485 IPR029070 Chitinase insertion domain VM_09485 IPR032798 VM_09485 VM_09485 IPR036573 VM_09485 VM_09490 IPR000771 Ketose-bisphosphate aldolase, class-II VM_09490 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY VM_09490 IPR013785 Aldolase-type TIM barrel VM_09495 IPR003764 N-acetylglucosamine-6-phosphate deacetylase VM_09495 IPR006680 Amidohydrolase 1 VM_09495 IPR011059 Metal-dependent hydrolase, composite domain VM_09495 IPR032466 VM_09495 VM_09500 IPR004701 Phosphotransferase system, mannose-type IIA component VM_09500 IPR036662 VM_09500 VM_09505 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component VM_09510 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit VM_09515 IPR004720 Phosphotransferase system, sorbose subfamily IIB component VM_09515 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup VM_09515 IPR036667 VM_09515 VM_09520 IPR001347 Sugar isomerase (SIS) VM_09520 IPR014180 Sugar isomerase, AgaS VM_09525 IPR012062 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit GatZ/KbaZ VM_09525 IPR013785 Aldolase-type TIM barrel VM_09530 IPR001034 HTH DeoR N-terminal domain VM_09530 IPR014036 DeoR C-terminal sensor domain VM_09530 IPR036390 VM_09530 VM_09530 IPR037171 VM_09530 VM_09535 IPR001034 HTH DeoR N-terminal domain VM_09535 IPR014036 DeoR C-terminal sensor domain VM_09535 IPR018356 Transcription regulator, HTH DeoR-type, conserved site VM_09535 IPR036388 VM_09535 VM_09535 IPR036390 VM_09535 VM_09535 IPR037171 VM_09535 VM_09540 IPR011701 Major facilitator superfamily VM_09540 IPR036259 VM_09540 VM_09545 IPR000340 Dual specificity phosphatase, catalytic domain VM_09545 IPR016130 Protein-tyrosine phosphatase, active site VM_09545 IPR029021 Protein-tyrosine phosphatase-like VM_09550 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I VM_09550 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain VM_09550 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain VM_09550 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site VM_09550 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family VM_09550 IPR036291 VM_09550 VM_09555 IPR001845 HTH ArsR-type DNA-binding domain VM_09555 IPR036388 VM_09555 VM_09555 IPR036390 VM_09555 VM_09560 IPR002125 CMP/dCMP deaminase, zinc-binding VM_09560 IPR016193 Cytidine deaminase-like VM_09565 IPR000390 Small multidrug resistance protein family VM_09570 IPR000390 Small multidrug resistance protein family VM_09575 IPR001853 DSBA-like thioredoxin domain VM_09575 IPR011767 Glutaredoxin active site VM_09575 IPR036249 VM_09575 VM_09580 IPR000835 MarR-type HTH domain VM_09580 IPR036388 VM_09580 VM_09580 IPR036390 VM_09580 VM_09585 IPR023998 Siderophore ferric iron reductase, AHA1954 family VM_09590 IPR011701 Major facilitator superfamily VM_09590 IPR036259 VM_09590 VM_09595 IPR003439 ABC transporter-like VM_09595 IPR003593 AAA+ ATPase domain VM_09595 IPR017871 ABC transporter, conserved site VM_09595 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_09600 IPR002491 ABC transporter periplasmic binding domain VM_09605 IPR000522 ABC transporter, permease protein VM_09605 IPR037294 VM_09605 VM_09610 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal VM_09610 IPR022770 Ferric iron reductase FhuF domain VM_09615 IPR016181 Acyl-CoA N-acyltransferase VM_09615 IPR019432 Siderophore biosynthesis protein, conserved domain VM_09620 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal VM_09620 IPR022770 Ferric iron reductase FhuF domain VM_09625 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase VM_09625 IPR036188 VM_09625 VM_09630 IPR000531 TonB-dependent receptor, beta-barrel VM_09630 IPR010105 TonB-dependent siderophore receptor VM_09630 IPR012910 TonB-dependent receptor, plug VM_09630 IPR036942 VM_09630 VM_09630 IPR037066 VM_09630 VM_09635 IPR001584 Integrase, catalytic core VM_09635 IPR009057 Homeodomain-like VM_09635 IPR012337 Ribonuclease H-like domain VM_09635 IPR036397 VM_09635 VM_09640 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_09650 IPR009057 Homeodomain-like VM_09650 IPR018060 DNA binding HTH domain, AraC-type VM_09650 IPR020449 Transcription regulator HTH, AraC- type VM_09650 IPR032783 VM_09650 VM_09665 IPR029035 DHS-like NAD/FAD-binding domain VM_09665 IPR039444 VM_09665 VM_09670 IPR001126 DNA-repair protein, UmuC-like VM_09670 IPR017961 DNA polymerase, Y-family, little finger domain VM_09670 IPR024728 DNA polymerase type-Y, HhH motif VM_09670 IPR025188 Domain of unknown function DUF4113 VM_09675 IPR015927 Peptidase S24/S26A/S26B/S26C VM_09675 IPR036286 VM_09675 VM_09680 IPR003201 Transposase Tn5, dimerisation VM_09680 IPR012337 Ribonuclease H-like domain VM_09680 IPR014737 Transposase, Tn5-like, C-terminal VM_09685 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_09690 IPR007374 ASCH domain VM_09690 IPR015947 PUA-like domain VM_09700 IPR018306 Bacteriophage T5, Orf172 DNA-binding VM_09700 IPR025280 Domain of unknown function DUF4041 VM_09715 IPR013396 CRISPR-associated protein Csy4 VM_09720 IPR013399 CRISPR-associated protein Csy3 VM_09725 IPR013398 CRISPR-associated protein Csy2 VM_09730 IPR009492 TniQ VM_09740 IPR003959 ATPase, AAA-type, core VM_09740 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_09755 IPR001387 Cro/C1-type helix-turn-helix domain VM_09755 IPR010982 Lambda repressor-like, DNA-binding domain VM_09760 IPR008868 Bacterial TniB VM_09760 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_09765 IPR001584 Integrase, catalytic core VM_09765 IPR012337 Ribonuclease H-like domain VM_09765 IPR015378 Transposase-like, Mu, C-terminal VM_09765 IPR036397 VM_09765 VM_09770 IPR014833 TnsA endonuclease, N-terminal VM_09780 IPR000160 GGDEF domain VM_09780 IPR001638 Extracellular solute-binding protein, family 3 VM_09780 IPR029787 Nucleotide cyclase VM_09790 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding VM_09790 IPR036217 VM_09790 VM_09790 IPR036388 VM_09790 VM_09795 IPR039366 VM_09795 VM_09800 IPR003703 Acyl-CoA thioesterase VM_09800 IPR029069 HotDog domain VM_09805 IPR000485 AsnC-type HTH domain VM_09805 IPR011008 Dimeric alpha-beta barrel VM_09805 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VM_09805 IPR019887 Transcription regulator AsnC-type, C-terminal VM_09805 IPR019888 Transcription regulator AsnC-type VM_09805 IPR036388 VM_09805 VM_09805 IPR036390 VM_09805 VM_09810 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VM_09810 IPR036052 VM_09810 VM_09815 IPR002142 Peptidase S49 VM_09815 IPR013703 Peptidase S49, N-terminal proteobacteria VM_09815 IPR029045 ClpP/crotonase-like domain VM_09820 IPR002347 Glucose/ribitol dehydrogenase VM_09820 IPR020904 Short-chain dehydrogenase/reductase, conserved site VM_09820 IPR036291 VM_09820 VM_09825 IPR005358 Putative zinc- or iron-chelating domain containing protein VM_09825 IPR008228 Uncharacterised conserved protein UCP006173 VM_09830 IPR005358 Putative zinc- or iron-chelating domain containing protein VM_09835 IPR000093 DNA recombination protein RecR VM_09835 IPR006171 Toprim domain VM_09835 IPR023627 Recombination protein RecR VM_09835 IPR023628 Recombination protein RecR, C4-type zinc finger VM_09840 IPR004401 Nucleoid-associated protein YbaB VM_09840 IPR036894 VM_09840 VM_09845 IPR003593 AAA+ ATPase domain VM_09845 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal VM_09845 IPR012763 DNA polymerase III, subunit gamma/ tau VM_09845 IPR021029 DNA polymerase III, tau subunit, domain V VM_09845 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV VM_09845 IPR022754 DNA polymerase III, gamma subunit, domain III VM_09845 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_09845 IPR038249 VM_09845 VM_09850 IPR000836 Phosphoribosyltransferase domain VM_09850 IPR005764 Adenine phosphoribosyl transferase VM_09850 IPR029057 Phosphoribosyltransferase-like VM_09855 IPR007401 Protein of unknown function DUF454 VM_09865 IPR001789 Signal transduction response regulator, receiver domain VM_09865 IPR011006 CheY-like superfamily VM_09865 IPR036457 VM_09865 VM_09870 IPR000847 Transcription regulator HTH, LysR VM_09870 IPR005119 LysR, substrate-binding VM_09870 IPR036388 VM_09870 VM_09870 IPR036390 VM_09870 VM_09875 IPR000415 Nitroreductase-like VM_09875 IPR026021 Putative NAD(P)H nitroreductase YdjA-like VM_09875 IPR029479 Nitroreductase VM_09880 IPR001753 Crotonase superfamily VM_09880 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal VM_09880 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding VM_09880 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site VM_09880 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like VM_09880 IPR012802 Fatty oxidation complex, alpha subunit FadJ VM_09880 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site VM_09880 IPR029045 ClpP/crotonase-like domain VM_09880 IPR036291 VM_09880 VM_09885 IPR002155 Thiolase VM_09885 IPR012806 Acetyl-CoA C-acyltransferase FadI VM_09885 IPR016039 Thiolase-like VM_09885 IPR020613 Thiolase, conserved site VM_09885 IPR020616 Thiolase, N-terminal VM_09885 IPR020617 Thiolase, C-terminal VM_09890 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site VM_09890 IPR007627 RNA polymerase sigma-70 region 2 VM_09890 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 VM_09890 IPR013324 RNA polymerase sigma factor, region 3/4 VM_09890 IPR013325 RNA polymerase sigma factor, region 2 VM_09890 IPR014284 RNA polymerase sigma-70 like domain VM_09890 IPR036388 VM_09890 VM_09895 IPR021806 Protein of unknown function DUF3379 VM_09900 IPR005017 Membrane protein, aromatic hydrocarbon degradation VM_09905 IPR005017 Membrane protein, aromatic hydrocarbon degradation VM_09910 IPR017867 Protein-tyrosine phosphatase, low molecular weight VM_09910 IPR023485 Phosphotyrosine protein phosphatase I superfamily VM_09910 IPR036196 VM_09910 VM_09915 IPR003724 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR VM_09915 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain VM_09915 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_09920 IPR007844 AsmA VM_09925 IPR000764 Uridine kinase like VM_09925 IPR006083 Phosphoribulokinase/uridine kinase VM_09925 IPR026008 Uridine kinase VM_09925 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_09930 IPR000808 Mrp, conserved site VM_09930 IPR019591 Mrp/NBP35 ATP-binding protein VM_09930 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_09930 IPR033756 VM_09930 VM_09935 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site VM_09935 IPR002547 tRNA-binding domain VM_09935 IPR004495 Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal VM_09935 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding VM_09935 IPR012340 Nucleic acid-binding, OB-fold VM_09935 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_09935 IPR014758 Methionyl-tRNA synthetase VM_09935 IPR015413 Methionyl/Leucyl tRNA synthetase VM_09935 IPR023458 Methionine-tRNA ligase, type 1 VM_09935 IPR029038 Methionyl-tRNA synthetase, Zn-domain VM_09935 IPR033911 VM_09935 VM_09945 IPR000845 Nucleoside phosphorylase domain VM_09945 IPR010058 Uridine phosphorylase VM_09945 IPR018016 Nucleoside phosphorylase, conserved site VM_09945 IPR035994 VM_09945 VM_09950 IPR001757 Cation-transporting P-type ATPase VM_09950 IPR006121 Heavy metal-associated domain, HMA VM_09950 IPR008250 P-type ATPase, A domain VM_09950 IPR017969 Heavy-metal-associated, conserved site VM_09950 IPR018303 P-type ATPase, phosphorylation site VM_09950 IPR023214 HAD-like domain VM_09950 IPR023298 P-type ATPase, transmembrane domain VM_09950 IPR023299 P-type ATPase, cytoplasmic domain N VM_09950 IPR027256 Cation-transporting P-type ATPase, subfamily IB VM_09950 IPR036163 VM_09950 VM_09950 IPR036412 VM_09950 VM_09955 IPR000644 CBS domain VM_09960 IPR000160 GGDEF domain VM_09960 IPR029787 Nucleotide cyclase VM_09965 IPR003448 Molybdopterin biosynthesis MoaE VM_09965 IPR036563 VM_09965 VM_09970 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 VM_09970 IPR012675 Beta-grasp domain VM_09970 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VM_09975 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain VM_09975 IPR023045 Molybdenum cofactor biosynthesis C VM_09975 IPR036522 VM_09975 VM_09980 IPR001453 Molybdopterin binding domain VM_09980 IPR008284 Molybdenum cofactor biosynthesis, conserved site VM_09980 IPR012245 Molybdenum cofactor biosynthesis protein MoaB VM_09980 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria VM_09980 IPR036425 VM_09980 VM_09985 IPR006638 Elongator protein 3/MiaB/NifB VM_09985 IPR007197 Radical SAM VM_09985 IPR010505 Molybdenum cofactor synthesis C-terminal VM_09985 IPR013483 Molybdenum cofactor biosynthesis protein A VM_09985 IPR013785 Aldolase-type TIM barrel VM_09990 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 VM_09990 IPR010119 Gluconeogenesis factor VM_09990 IPR038136 VM_09990 VM_09995 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain VM_09995 IPR036641 VM_09995 VM_10000 IPR001789 Signal transduction response regulator, receiver domain VM_10000 IPR002078 RNA polymerase sigma factor 54 interaction domain VM_10000 IPR002197 DNA binding HTH domain, Fis-type VM_10000 IPR003593 AAA+ ATPase domain VM_10000 IPR009057 Homeodomain-like VM_10000 IPR011006 CheY-like superfamily VM_10000 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VM_10000 IPR025944 Sigma-54 interaction domain, conserved site VM_10000 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_10005 IPR001650 Helicase, C-terminal VM_10005 IPR001943 UVR domain VM_10005 IPR004807 UvrABC system, subunit B VM_10005 IPR006935 Helicase/UvrB domain VM_10005 IPR014001 Helicase, superfamily 1/2, ATP-binding domain VM_10005 IPR024759 UvrB, YAD/RRR-motif-containing domain VM_10005 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_10005 IPR036876 VM_10005 VM_10015 IPR000847 Transcription regulator HTH, LysR VM_10015 IPR005119 LysR, substrate-binding VM_10015 IPR036388 VM_10015 VM_10015 IPR036390 VM_10015 VM_10020 IPR000917 Sulfatase VM_10020 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha VM_10020 IPR017850 Alkaline-phosphatase-like, core domain VM_10025 IPR007197 Radical SAM VM_10025 IPR013785 Aldolase-type TIM barrel VM_10025 IPR023885 4Fe4S-binding SPASM domain VM_10030 IPR011703 ATPase, AAA-3 VM_10030 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_10035 IPR002881 Domain of unknown function DUF58 VM_10040 IPR025489 Protein of unknown function (DUF4381 VM_10045 IPR002035 von Willebrand factor, type A VM_10045 IPR036465 VM_10045 VM_10055 IPR025738 Aerotolerance-related protein BatD VM_10060 IPR023214 HAD-like domain VM_10060 IPR036412 VM_10060 VM_10065 IPR003667 Electron transport complex, Rnf/Nqr VM_10065 IPR011293 Electron transport complex, RnfA VM_10070 IPR007202 4Fe-4S domain VM_10070 IPR010207 Electron transport complex, RnfB VM_10070 IPR016463 Electron transport complex, RnfB, Proteobacteria VM_10070 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VM_10075 IPR009051 Alpha-helical ferredoxin VM_10075 IPR010208 Electron transport complex protein RnfC VM_10075 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit VM_10075 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VM_10075 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VM_10075 IPR019554 Soluble ligand binding domain VM_10075 IPR026902 RnfC Barrel sandwich hybrid domain VM_10075 IPR037225 VM_10075 VM_10080 IPR004338 NADH-quinone reductase NQR2/RnfD VM_10080 IPR011303 Electron transport complex, RnfD VM_10085 IPR007329 FMN-binding VM_10085 IPR010209 Electron transport complex, RnfG VM_10090 IPR003667 Electron transport complex, Rnf/Nqr VM_10090 IPR010968 Electron transport complex, RnfE VM_10095 IPR000445 Helix-hairpin-helix motif VM_10095 IPR003265 HhH-GPD domain VM_10095 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif VM_10095 IPR004035 Endonuclease III, iron-sulphur binding site VM_10095 IPR004036 Endonuclease III-like, conserved site-2 VM_10095 IPR005759 Endonuclease III VM_10095 IPR011257 DNA glycosylase VM_10095 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal VM_10100 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VM_10100 IPR004361 Glyoxalase I VM_10100 IPR018146 Glyoxalase I, conserved site VM_10100 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VM_10105 IPR002559 Transposase, IS4-like VM_10105 IPR003201 Transposase Tn5, dimerisation VM_10105 IPR012337 Ribonuclease H-like domain VM_10105 IPR014735 Transposase, Tn5-like, N-terminal VM_10105 IPR014736 Transposase, Tn5-like, core VM_10105 IPR014737 Transposase, Tn5-like, C-terminal VM_10105 IPR038215 VM_10105 VM_10110 IPR020206 Uncharacterised protein family, VP2110 VM_10115 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal VM_10115 IPR036737 VM_10115 VM_10120 IPR005987 Ribonuclease T VM_10120 IPR012337 Ribonuclease H-like domain VM_10120 IPR013520 Exonuclease, RNase T/DNA polymerase III VM_10120 IPR036397 VM_10120 VM_10125 IPR018461 Na+/H+ antiporter, NhaC-like VM_10125 IPR032813 VM_10125 VM_10130 IPR005854 Amidophosphoribosyl transferase VM_10130 IPR029055 Nucleophile aminohydrolases, N-terminal VM_10130 IPR029057 Phosphoribosyltransferase-like VM_10135 IPR003825 Colicin V production, CvpA VM_10140 IPR007730 Sporulation-related domain VM_10140 IPR036680 VM_10140 VM_10145 IPR001645 Folylpolyglutamate synthetase VM_10145 IPR004101 Mur ligase, C-terminal VM_10145 IPR013221 Mur ligase, central VM_10145 IPR018109 Folylpolyglutamate synthetase, conserved site VM_10145 IPR036565 VM_10145 VM_10145 IPR036615 VM_10145 VM_10150 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit VM_10150 IPR029045 ClpP/crotonase-like domain VM_10150 IPR034733 VM_10150 VM_10155 IPR001406 Pseudouridine synthase I, TruA VM_10155 IPR020095 Pseudouridine synthase I, TruA, C-terminal VM_10155 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain VM_10155 IPR020103 Pseudouridine synthase, catalytic domain VM_10160 IPR020011 Motility protein FimV, C-terminal VM_10160 IPR020012 Motility protein FimV, N-terminal VM_10160 IPR038440 VM_10160 VM_10165 IPR000924 Glutamyl/glutaminyl-tRNA synthetase VM_10165 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site VM_10165 IPR004514 Glutamine-tRNA synthetase VM_10165 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain VM_10165 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_10165 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain VM_10165 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain VM_10165 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain VM_10165 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain VM_10165 IPR022861 Glutamine-tRNA ligase, bacterial VM_10170 IPR001996 Phosphotransferase system, IIB component, type 1 VM_10170 IPR003352 Phosphotransferase system, EIIC VM_10170 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component VM_10170 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site VM_10170 IPR036878 VM_10170 VM_10175 IPR003764 N-acetylglucosamine-6-phosphate deacetylase VM_10175 IPR006680 Amidohydrolase 1 VM_10175 IPR011059 Metal-dependent hydrolase, composite domain VM_10175 IPR032466 VM_10175 VM_10180 IPR000600 ROK VM_10180 IPR036388 VM_10180 VM_10180 IPR036390 VM_10180 VM_10185 IPR003148 Regulator of K+ conductance, N-terminal VM_10185 IPR006153 Cation/H+ exchanger VM_10185 IPR036291 VM_10185 VM_10185 IPR038770 VM_10185 VM_10190 IPR001962 Asparagine synthase VM_10190 IPR006426 Asparagine synthase, glutamine-hydrolyzing VM_10190 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_10190 IPR017932 Glutamine amidotransferase type 2 domain VM_10190 IPR029055 Nucleophile aminohydrolases, N-terminal VM_10195 IPR006645 NusG, N-terminal VM_10195 IPR010215 Transcription antitermination protein RfaH VM_10195 IPR036735 VM_10195 VM_10200 IPR000109 Proton-dependent oligopeptide transporter family VM_10200 IPR005279 Amino acid/peptide transporter family VM_10200 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site VM_10200 IPR036259 VM_10200 VM_10205 IPR001015 Ferrochelatase VM_10205 IPR019772 Ferrochelatase, active site VM_10210 IPR000850 Adenylate kinase/UMP-CMP kinase VM_10210 IPR006259 Adenylate kinase subfamily VM_10210 IPR007862 Adenylate kinase, active site lid domain VM_10210 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_10210 IPR033690 VM_10210 VM_10215 IPR001404 Heat shock protein Hsp90 family VM_10215 IPR003594 Histidine kinase-like ATPase, C-terminal domain VM_10215 IPR019805 Heat shock protein Hsp90, conserved site VM_10215 IPR020568 Ribosomal protein S5 domain 2-type fold VM_10215 IPR020575 Heat shock protein Hsp90, N-terminal VM_10215 IPR036890 VM_10215 VM_10215 IPR037196 VM_10215 VM_10220 IPR001867 Signal transduction response regulator, C-terminal VM_10220 IPR016032 Signal transduction response regulator, C-terminal effector VM_10220 IPR036388 VM_10220 VM_10225 IPR035288 VM_10225 VM_10230 IPR011893 Selenoprotein, Rdx type VM_10230 IPR036249 VM_10230 VM_10235 IPR000979 Phosphodiesterase MJ0936/Vps29 VM_10235 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type VM_10235 IPR029052 Metallo-dependent phosphatase-like VM_10240 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain VM_10240 IPR010099 Sugar nucleotide epimerase YfcH,-like putative VM_10240 IPR013549 Domain of unknown function DUF1731 VM_10240 IPR036291 VM_10240 VM_10245 IPR002347 Glucose/ribitol dehydrogenase VM_10245 IPR020904 Short-chain dehydrogenase/reductase, conserved site VM_10245 IPR036291 VM_10245 VM_10250 IPR008939 Lytic transglycosylase, superhelical U-shaped VM_10250 IPR011990 Tetratricopeptide-like helical domain VM_10250 IPR013766 Thioredoxin domain VM_10250 IPR036249 VM_10250 VM_10255 IPR001107 Band 7 protein VM_10255 IPR001972 Stomatin family VM_10255 IPR018080 Band 7/stomatin-like, conserved site VM_10255 IPR032435 VM_10255 VM_10255 IPR036013 VM_10255 VM_10260 IPR002810 NfeD-like, C-terminal domain VM_10265 IPR000551 MerR-type HTH domain VM_10265 IPR009061 DNA binding domain, putative VM_10265 IPR011789 Cu(I)-responsive transcriptional regulator VM_10275 IPR001702 Porin, Gram-negative type VM_10275 IPR002299 Porin, Neisseria sp. type VM_10275 IPR023614 Porin domain VM_10280 IPR001357 BRCT domain VM_10280 IPR001679 NAD-dependent DNA ligase VM_10280 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 VM_10280 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type VM_10280 IPR004150 NAD-dependent DNA ligase, OB-fold VM_10280 IPR010994 RuvA domain 2-like VM_10280 IPR012340 Nucleic acid-binding, OB-fold VM_10280 IPR013839 NAD-dependent DNA ligase, adenylation VM_10280 IPR013840 NAD-dependent DNA ligase, N-terminal VM_10280 IPR018239 NAD-dependent DNA ligase, active site VM_10280 IPR033136 VM_10280 VM_10280 IPR036420 VM_10280 VM_10285 IPR007449 ZipA, C-terminal FtsZ-binding domain VM_10285 IPR011919 Cell division protein ZipA VM_10285 IPR036765 VM_10285 VM_10290 IPR022985 CysZ, gammaproteobacteria VM_10295 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site VM_10295 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VM_10295 IPR005856 Cysteine synthase K/M VM_10295 IPR005859 Cysteine synthase A VM_10295 IPR036052 VM_10295 VM_10305 IPR000032 Phosphocarrier HPr protein-like VM_10305 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site VM_10305 IPR002114 Phosphotransferase system, HPr serine phosphorylation site VM_10305 IPR035895 VM_10305 VM_10310 IPR000121 PEP-utilising enzyme, C-terminal VM_10310 IPR006318 Phosphoenolpyruvate-utilising enzyme VM_10310 IPR008279 PEP-utilising enzyme, mobile domain VM_10310 IPR008731 Phosphotransferase system, enzyme I N-terminal VM_10310 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain VM_10310 IPR018274 PEP-utilising enzyme, active site VM_10310 IPR023151 PEP-utilising enzyme, conserved site VM_10310 IPR024692 Phosphotransferase system, enzyme I VM_10310 IPR036618 VM_10310 VM_10310 IPR036637 VM_10310 VM_10315 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 VM_10315 IPR011055 Duplicated hybrid motif VM_10320 IPR002938 Monooxygenase, FAD-binding VM_10320 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 VM_10320 IPR036188 VM_10320 VM_10325 IPR002792 TRAM domain VM_10325 IPR005839 Methylthiotransferase VM_10325 IPR006463 tRNA-i(6)A37 modification enzyme MiaB VM_10325 IPR006638 Elongator protein 3/MiaB/NifB VM_10325 IPR007197 Radical SAM VM_10325 IPR013848 Methylthiotransferase, N-terminal VM_10325 IPR020612 Methylthiotransferase, conserved site VM_10325 IPR023404 Radical SAM, alpha/beta horseshoe VM_10325 IPR038135 VM_10325 VM_10330 IPR003714 PhoH-like protein VM_10330 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_10335 IPR002036 Endoribonuclease YbeY VM_10335 IPR020549 Endoribonuclease YbeY, conserved site VM_10335 IPR023091 Metalloprotease catalytic domain, predicted VM_10340 IPR000644 CBS domain VM_10340 IPR005170 Transporter-associated domain VM_10340 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 VM_10340 IPR036318 VM_10340 VM_10345 IPR003010 Carbon-nitrogen hydrolase VM_10345 IPR004563 Apolipoprotein N-acyltransferase VM_10345 IPR036526 VM_10345 VM_10350 IPR009912 Protein of unknown function DUF1451 VM_10355 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site VM_10355 IPR002300 Aminoacyl-tRNA synthetase, class Ia VM_10355 IPR002302 Leucine-tRNA ligase VM_10355 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain VM_10355 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding VM_10355 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding VM_10355 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_10355 IPR025709 Leucyl-tRNA synthetase, editing domain VM_10360 IPR007485 Lipopolysaccharide assembly, LptE VM_10365 IPR005790 DNA polymerase III, delta subunit VM_10365 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal VM_10365 IPR010372 DNA polymerase III, delta VM_10365 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_10365 IPR032780 VM_10365 VM_10370 IPR004394 Protein Iojap/ribosomal silencing factor RsfS VM_10375 IPR003742 SPOUT methyltransferase, predicted VM_10375 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VM_10375 IPR029028 Alpha/beta knot methyltransferases VM_10380 IPR001460 Penicillin-binding protein, transpeptidase VM_10380 IPR005311 Penicillin-binding protein, dimerisation domain VM_10380 IPR012338 Beta-lactamase/transpeptidase-like VM_10380 IPR017790 Penicillin-binding protein 2 VM_10380 IPR036138 VM_10380 VM_10385 IPR001182 Cell cycle protein FtsW/RodA VM_10385 IPR011923 Rod shape-determining protein RodA VM_10385 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site VM_10390 IPR007730 Sporulation-related domain VM_10390 IPR009009 RlpA-like double-psi beta-barrel domain VM_10390 IPR012997 Rare lipoprotein A, bacterial VM_10390 IPR034718 VM_10390 VM_10390 IPR036680 VM_10390 VM_10390 IPR036908 VM_10390 VM_10395 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal VM_10395 IPR012338 Beta-lactamase/transpeptidase-like VM_10395 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal VM_10395 IPR015956 Penicillin-binding protein-associated VM_10395 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A VM_10395 IPR037167 VM_10395 VM_10400 IPR007454 Uncharacterised protein family UPF0250 VM_10400 IPR027471 YbeD-like domain VM_10405 IPR000544 Octanoyltransferase VM_10405 IPR004143 Biotin/lipoate A/B protein ligase VM_10405 IPR020605 Octanoyltransferase, conserved site VM_10410 IPR003698 Lipoyl synthase VM_10410 IPR006638 Elongator protein 3/MiaB/NifB VM_10410 IPR007197 Radical SAM VM_10410 IPR013785 Aldolase-type TIM barrel VM_10410 IPR031691 VM_10410 VM_10420 IPR001085 Serine hydroxymethyltransferase VM_10420 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VM_10420 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VM_10420 IPR015424 Pyridoxal phosphate-dependent transferase VM_10420 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site VM_10420 IPR039429 VM_10420 VM_10425 IPR003740 Membrane Protein of unknown function DUF161 VM_10435 IPR011990 Tetratricopeptide-like helical domain VM_10440 IPR003856 Lipopolysaccharide biosynthesis VM_10440 IPR005702 Exopolysaccharide synthesis protein VM_10440 IPR025669 AAA domain VM_10440 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_10440 IPR032807 VM_10440 VM_10445 IPR003715 Polysaccharide export protein VM_10445 IPR019554 Soluble ligand binding domain VM_10450 IPR018759 Protein of unknown function DUF2320 VM_10455 IPR003362 Bacterial sugar transferase VM_10455 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ VM_10455 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase VM_10455 IPR036291 VM_10455 VM_10465 IPR007016 O-antigen ligase-related VM_10470 IPR018247 EF-Hand 1, calcium-binding site VM_10470 IPR032496 VM_10470 VM_10470 IPR036404 VM_10470 VM_10475 IPR006626 Parallel beta-helix repeat VM_10475 IPR011050 Pectin lyase fold/virulence factor VM_10475 IPR012334 Pectin lyase fold VM_10475 IPR024535 VM_10475 VM_10485 IPR004629 Glycosyl transferase WecB/TagA/CpsF VM_10490 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid VM_10495 IPR001296 Glycosyl transferase, family 1 VM_10500 IPR000873 AMP-dependent synthetase/ligase VM_10505 IPR001451 Bacterial transferase hexapeptide repeat VM_10505 IPR005881 Serine O-acetyltransferase VM_10505 IPR011004 Trimeric LpxA-like VM_10505 IPR018357 Hexapeptide transferase, conserved site VM_10515 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain VM_10520 IPR001296 Glycosyl transferase, family 1 VM_10520 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain VM_10525 IPR001451 Bacterial transferase hexapeptide repeat VM_10525 IPR011004 Trimeric LpxA-like VM_10525 IPR018357 Hexapeptide transferase, conserved site VM_10530 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal VM_10530 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like VM_10530 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation VM_10530 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal VM_10530 IPR017476 UDP-glucose/GDP-mannose dehydrogenase VM_10530 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase VM_10530 IPR036220 VM_10530 VM_10530 IPR036291 VM_10530 VM_10535 IPR003331 UDP-N-acetylglucosamine 2-epimerase VM_10535 IPR029767 UDP-N-acetylglucosamine 2-epimerase, WecB-type VM_10540 IPR017867 Protein-tyrosine phosphatase, low molecular weight VM_10540 IPR023485 Phosphotyrosine protein phosphatase I superfamily VM_10540 IPR036196 VM_10540 VM_10545 IPR001036 Acriflavin resistance protein VM_10545 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VM_10550 IPR006143 RND efflux pump, membrane fusion protein VM_10550 IPR032317 VM_10550 VM_10575 IPR013783 Immunoglobulin-like fold VM_10580 IPR016896 Protein of unknown function DUF2860 VM_10585 IPR003594 Histidine kinase-like ATPase, C-terminal domain VM_10585 IPR003660 HAMP linker domain VM_10585 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain VM_10585 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_10585 IPR036097 VM_10585 VM_10585 IPR036890 VM_10585 VM_10590 IPR001789 Signal transduction response regulator, receiver domain VM_10590 IPR001867 Signal transduction response regulator, C-terminal VM_10590 IPR011006 CheY-like superfamily VM_10590 IPR016032 Signal transduction response regulator, C-terminal effector VM_10590 IPR036388 VM_10590 VM_10595 IPR006047 Glycosyl hydrolase, family 13, catalytic domain VM_10595 IPR012769 Trehalose-6-phosphate hydrolase VM_10595 IPR013780 Glycosyl hydrolase, family 13, all-beta VM_10595 IPR017853 Glycoside hydrolase, superfamily VM_10600 IPR001996 Phosphotransferase system, IIB component, type 1 VM_10600 IPR003352 Phosphotransferase system, EIIC VM_10600 IPR011296 Phosphotransferase system, trehalose-specific IIBC component VM_10600 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site VM_10600 IPR036878 VM_10600 VM_10605 IPR000843 Transcription regulator HTH, LacI VM_10605 IPR010982 Lambda repressor-like, DNA-binding domain VM_10605 IPR012771 Trehalose operon repressor VM_10605 IPR028082 Periplasmic binding protein-like I VM_10610 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase VM_10610 IPR006543 Histidinol-phosphate phosphatase VM_10610 IPR006549 HAD-superfamily hydrolase,subfamily IIIA VM_10610 IPR023214 HAD-like domain VM_10610 IPR036412 VM_10610 VM_10615 IPR003439 ABC transporter-like VM_10615 IPR003593 AAA+ ATPase domain VM_10615 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria VM_10615 IPR017871 ABC transporter, conserved site VM_10615 IPR018449 NIL domain VM_10615 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_10620 IPR000515 MetI-like domain VM_10620 IPR035906 VM_10620 VM_10625 IPR004872 Lipoprotein NlpA family VM_10630 IPR016908 Uncharacterised conserved protein UCP029037 VM_10635 IPR009948 Syd VM_10635 IPR038228 VM_10635 VM_10640 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 VM_10640 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal VM_10640 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF VM_10645 IPR011990 Tetratricopeptide-like helical domain VM_10645 IPR019734 Tetratricopeptide repeat VM_10650 IPR000160 GGDEF domain VM_10650 IPR029787 Nucleotide cyclase VM_10655 IPR021826 Protein of unknown function DUF3412 VM_10655 IPR027820 Domain of unknown function DUF4478 VM_10655 IPR031100 VM_10655 VM_10655 IPR037153 VM_10655 VM_10660 IPR002421 5'-3' exonuclease, N-terminal VM_10660 IPR008918 Helix-hairpin-helix motif, class 2 VM_10660 IPR020045 5'-3' exonuclease, C-terminal domain VM_10660 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal VM_10660 IPR022895 Flap endonuclease Xni VM_10660 IPR029060 PIN domain-like VM_10660 IPR036279 VM_10660 VM_10665 IPR006696 Protein of unknown function DUF423 VM_10670 IPR000847 Transcription regulator HTH, LysR VM_10670 IPR005119 LysR, substrate-binding VM_10670 IPR036388 VM_10670 VM_10670 IPR036390 VM_10670 VM_10680 IPR003720 tRNA sulfurtransferase ThiI VM_10680 IPR004114 THUMP VM_10680 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_10680 IPR020536 Thil, AANH domain VM_10680 IPR026340 Thiazole biosynthesis domain VM_10680 IPR036873 VM_10680 VM_10685 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal VM_10685 IPR025713 Motility protein B, N-terminal domain VM_10685 IPR036737 VM_10685 VM_10690 IPR000540 Flagellar motor protein MotA, conserved site VM_10690 IPR002898 MotA/TolQ/ExbB proton channel VM_10695 IPR003761 Exonuclease VII, small subunit VM_10695 IPR037004 VM_10695 VM_10700 IPR000092 Polyprenyl synthetase VM_10700 IPR008949 Terpenoid synthase VM_10700 IPR033749 VM_10700 VM_10705 IPR005474 Transketolase, N-terminal VM_10705 IPR005475 Transketolase-like, pyrimidine-binding domain VM_10705 IPR005477 Deoxyxylulose-5-phosphate synthase VM_10705 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II VM_10705 IPR020826 Transketolase binding site VM_10705 IPR029061 Thiamin diphosphate-binding fold VM_10705 IPR033248 VM_10705 VM_10710 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F VM_10710 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site VM_10710 IPR020103 Pseudouridine synthase, catalytic domain VM_10715 IPR007384 Protein of unknown function UCP006257 VM_10715 IPR023376 YqcC-like domain VM_10715 IPR036814 VM_10715 VM_10720 IPR021936 Protein of unknown function DUF3549 VM_10725 IPR021732 Protein of unknown function DUF3301 VM_10730 IPR000182 GNAT domain VM_10730 IPR016181 Acyl-CoA N-acyltransferase VM_10740 IPR003791 Protein of unknown function UPF0178 VM_10745 IPR004697 AbgT VM_10750 IPR000473 Ribosomal protein L36 VM_10750 IPR035977 VM_10750 VM_10755 IPR002150 Ribosomal protein L31 VM_10755 IPR027493 Ribosomal protein L31 type B VM_10755 IPR034704 VM_10755 VM_10760 IPR023368 Uncharacterised protein family UPF0066, conserved site VM_10760 IPR023370 TsaA-like domain VM_10760 IPR036413 VM_10760 VM_10760 IPR036414 VM_10760 VM_10765 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain VM_10765 IPR002316 Proline-tRNA ligase, class IIa VM_10765 IPR004154 Anticodon-binding VM_10765 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type VM_10765 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain VM_10765 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 VM_10765 IPR036621 VM_10765 VM_10765 IPR036754 VM_10765 VM_10770 IPR007486 Protein of unknown function DUF533 VM_10770 IPR029024 TerB-like VM_10775 IPR009624 Uncharacterised protein family UPF0253 VM_10780 IPR025346 Protein of unknown function DUF4250 VM_10785 IPR010073 Phosphoribosylformylglycinamidine synthase VM_10785 IPR010918 AIR synthase-related protein, C-terminal domain VM_10785 IPR029062 Class I glutamine amidotransferase-like VM_10785 IPR036604 VM_10785 VM_10785 IPR036676 VM_10785 VM_10785 IPR036921 VM_10785 VM_10795 IPR000189 Prokaryotic transglycosylase, active site VM_10795 IPR001638 Extracellular solute-binding protein, family 3 VM_10795 IPR008258 Lytic transglycosylase-like SLT domain VM_10795 IPR023346 Lysozyme-like domain VM_10795 IPR023703 Membrane-bound lytic murein transglycosylase F VM_10805 IPR016192 APOBEC/CMP deaminase, zinc-binding VM_10805 IPR016193 Cytidine deaminase-like VM_10805 IPR028883 tRNA-specific adenosine deaminase VM_10810 IPR004697 AbgT VM_10820 IPR012902 Prokaryotic N-terminal methylation site VM_10830 IPR016419 Prepilin peptidase-dependent protein B, predicted VM_10835 IPR012902 Prokaryotic N-terminal methylation site VM_10835 IPR016824 Tfp pilus assembly protein FimT VM_10835 IPR022346 General secretion pathway, GspH VM_10840 IPR012902 Prokaryotic N-terminal methylation site VM_10840 IPR031982 VM_10840 VM_10845 IPR001305 Heat shock protein DnaJ, cysteine-rich domain VM_10845 IPR001623 DnaJ domain VM_10845 IPR002939 Chaperone DnaJ, C-terminal VM_10845 IPR008971 HSP40/DnaJ peptide-binding VM_10845 IPR012724 Chaperone DnaJ VM_10845 IPR018253 DnaJ domain, conserved site VM_10845 IPR036410 VM_10845 VM_10845 IPR036869 VM_10845 VM_10850 IPR012725 Chaperone DnaK VM_10850 IPR013126 Heat shock protein 70 family VM_10850 IPR018181 Heat shock protein 70, conserved site VM_10850 IPR029047 Heat shock protein 70kD, peptide-binding domain VM_10850 IPR029048 Heat shock protein 70kD, C-terminal domain VM_10855 IPR000740 GrpE nucleotide exchange factor VM_10855 IPR009012 GrpE nucleotide exchange factor, head VM_10855 IPR013805 GrpE nucleotide exchange factor, coiled-coil VM_10860 IPR002504 Inorganic polyphosphate/ATP-NAD kinase VM_10860 IPR016064 ATP-NAD kinase-like domain VM_10860 IPR017437 ATP-NAD kinase, PpnK-type, all-beta VM_10860 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 VM_10865 IPR003395 RecF/RecN/SMC, N-terminal VM_10865 IPR004604 DNA recombination/repair protein RecN VM_10865 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_10870 IPR007450 Lipoprotein SmpA/OmlA VM_10870 IPR026592 Outer membrane protein assembly factor BamE VM_10870 IPR037873 VM_10870 VM_10875 IPR005346 RnfH protein VM_10875 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VM_10875 IPR037021 VM_10875 VM_10880 IPR005031 Streptomyces cyclase/dehydrase VM_10880 IPR023393 START-like domain VM_10885 IPR000037 SsrA-binding protein VM_10885 IPR020081 SsrA-binding protein, conserved site VM_10885 IPR023620 Small protein B VM_10895 IPR025166 Domain of unknown function DUF4102 VM_10895 IPR038488 VM_10895 VM_10900 IPR009061 DNA binding domain, putative VM_10900 IPR015927 Peptidase S24/S26A/S26B/S26C VM_10900 IPR036286 VM_10900 VM_10900 IPR036388 VM_10900 VM_10905 IPR010982 Lambda repressor-like, DNA-binding domain VM_10905 IPR038722 VM_10905 VM_10910 IPR003314 Transposase MuA/Repressor CI, DNA-binding VM_10910 IPR004189 Bacteriophage Mu, transposase VM_10910 IPR009004 Transposase, Mu, C-terminal VM_10910 IPR009057 Homeodomain-like VM_10910 IPR009061 DNA binding domain, putative VM_10910 IPR012337 Ribonuclease H-like domain VM_10910 IPR015126 Mu DNA binding, I gamma subdomain VM_10910 IPR015378 Transposase-like, Mu, C-terminal VM_10910 IPR036388 VM_10910 VM_10910 IPR036397 VM_10910 VM_10915 IPR003593 AAA+ ATPase domain VM_10915 IPR009084 B transposition protein, C-terminal VM_10915 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_10915 IPR036733 VM_10915 VM_10940 IPR021505 Bacteriophage B3, Orf6 VM_10965 IPR015947 PUA-like domain VM_10965 IPR039440 VM_10965 VM_10995 IPR009363 Bacteriophage Mu, Gp16 VM_11005 IPR009057 Homeodomain-like VM_11005 IPR014875 Mor transcription activator VM_11010 IPR008565 Protein of unknown function DUF847 VM_11010 IPR018537 Peptidoglycan binding domain VM_11010 IPR023346 Lysozyme-like domain VM_11025 IPR000962 Zinc finger, DksA/TraR C4-type VM_11025 IPR012783 Zinc finger, C4 DksA/TraR-type VM_11030 IPR020269 Bacteriophage Mu, Gp25 VM_11035 IPR036390 VM_11035 VM_11040 IPR021874 Bacteriophage Mu, Gp27 VM_11045 IPR004921 Terminase, large subunit VM_11045 IPR012036 Bacteriophage Mu, Gp28 VM_11050 IPR009279 Protein of unknown function DUF935 VM_11055 IPR006528 Phage head morphogenesis domain VM_11065 IPR032395 VM_11065 VM_11065 IPR038681 VM_11065 VM_11070 IPR013830 VM_11070 VM_11070 IPR036514 VM_11070 VM_11075 IPR012106 Bacteriophage Mu, Gp32 VM_11080 IPR018774 Bacteriophage Mu, GpT VM_11090 IPR009752 Bacteriophage Mu, Gp36 VM_11095 IPR006522 Phage virion morphogensis protein VM_11105 IPR024400 Protein of unknown function DUF2635 VM_11115 IPR019596 Bacteriophage Mu, GpM, tail tube VM_11120 IPR019289 Bacteriophage tail protein Gp41, putative VM_11130 IPR009826 DNA circulation, N-terminal VM_11135 IPR023399 Baseplate-like protein, two-layer sandwich domain VM_11135 IPR026276 Baseplate protein GpP VM_11140 IPR013046 Bacteriophage Mu/P2, baseplate assembly VM_11140 IPR014462 Bacteriophage Mu, Gp45 VM_11145 IPR010877 Bacteriophage Mu, Gp46 VM_11150 IPR006949 Baseplate assembly protein J-like, predicted VM_11155 IPR018755 Bacteriophage Mu, Gp48 VM_11175 IPR001584 Integrase, catalytic core VM_11175 IPR009057 Homeodomain-like VM_11175 IPR012337 Ribonuclease H-like domain VM_11175 IPR036397 VM_11175 VM_11180 IPR004473 Restriction endonuclease, type I, HsdR VM_11180 IPR006935 Helicase/UvrB domain VM_11180 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal VM_11180 IPR014001 Helicase, superfamily 1/2, ATP-binding domain VM_11180 IPR021810 Protein of unknown function DUF3387 VM_11180 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_11185 IPR000055 Restriction endonuclease, type I, HsdS VM_11190 IPR003356 DNA methylase, adenine-specific VM_11190 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain VM_11190 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VM_11190 IPR038333 VM_11190 VM_11195 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_11200 IPR016870 Uncharacterised conserved protein UCP028137, membrane VM_11205 IPR002937 Amine oxidase VM_11205 IPR028348 FAD dependent protein VM_11205 IPR036188 VM_11205 VM_11210 IPR000813 7Fe ferredoxin VM_11210 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VM_11210 IPR022569 Ferredoxin, C-terminal VM_11215 IPR001537 tRNA/rRNA methyltransferase, SpoU type VM_11215 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VM_11215 IPR029028 Alpha/beta knot methyltransferases VM_11215 IPR029064 50S ribosomal protein L30e-like VM_11220 IPR018717 Domain of unknown function DUF2241 VM_11220 IPR027795 GATS-like ACT domain VM_11225 IPR002736 Triphosphoribosyl-dephospho-CoA protein VM_11225 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG VM_11230 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase VM_11235 IPR006472 Citrate lyase, alpha subunit VM_11235 IPR037171 VM_11235 VM_11240 IPR005000 HpcH/HpaI aldolase/citrate lyase domain VM_11240 IPR006475 Citrate lyase, beta subunit, bacteria VM_11240 IPR011206 Citrate lyase beta subunit-like VM_11240 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain VM_11245 IPR006495 Citrate lyase acyl carrier protein CitD VM_11245 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein VM_11250 IPR000182 GNAT domain VM_11250 IPR004821 Cytidyltransferase-like domain VM_11250 IPR005216 Citrate lyase ligase VM_11250 IPR013166 Citrate lyase ligase, C-terminal VM_11250 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_11250 IPR016181 Acyl-CoA N-acyltransferase VM_11255 IPR004679 2-hydroxycarboxylate transporter VM_11260 IPR005899 Sodium ion-translocating decarboxylase VM_11260 IPR023424 Oxaloacetate decarboxylase gamma chain, probable VM_11265 IPR000089 Biotin/lipoyl attachment VM_11265 IPR000891 Pyruvate carboxyltransferase VM_11265 IPR001882 Biotin-binding site VM_11265 IPR003379 Carboxylase, conserved domain VM_11265 IPR005776 Oxaloacetate decarboxylase, alpha subunit VM_11265 IPR011053 Single hybrid motif VM_11265 IPR013785 Aldolase-type TIM barrel VM_11270 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit VM_11275 IPR000014 PAS domain VM_11275 IPR003594 Histidine kinase-like ATPase, C-terminal domain VM_11275 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_11275 IPR029151 Periplasmic sensor domain-like VM_11275 IPR033463 VM_11275 VM_11275 IPR035965 VM_11275 VM_11275 IPR036890 VM_11275 VM_11275 IPR039506 VM_11275 VM_11280 IPR001789 Signal transduction response regulator, receiver domain VM_11280 IPR011006 CheY-like superfamily VM_11280 IPR024187 Signal transduction response regulator, citrate/malate metabolism VM_11280 IPR028141 Transcriptional regulator VM_11290 IPR001633 EAL domain VM_11290 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain VM_11290 IPR035919 VM_11290 VM_11295 IPR014980 Dopa 4,5-dioxygenase VM_11295 IPR023389 DOPA-like domain VM_11300 IPR001646 Pentapeptide repeat VM_11300 IPR013099 Two pore domain potassium channel domain VM_11305 IPR000847 Transcription regulator HTH, LysR VM_11305 IPR005119 LysR, substrate-binding VM_11305 IPR036388 VM_11305 VM_11305 IPR036390 VM_11305 VM_11310 IPR006076 FAD dependent oxidoreductase VM_11310 IPR023080 D-amino acid dehydrogenase small subunit, DadA VM_11310 IPR036188 VM_11310 VM_11315 IPR001463 Sodium:alanine symporter VM_11320 IPR001279 Beta-lactamase-like VM_11320 IPR029228 Alkyl sulfatase dimerisation domain VM_11320 IPR029229 Alkyl sulfatase, C-terminal VM_11320 IPR036527 VM_11320 VM_11320 IPR036866 VM_11320 VM_11320 IPR038536 VM_11320 VM_11325 IPR000847 Transcription regulator HTH, LysR VM_11325 IPR005119 LysR, substrate-binding VM_11325 IPR036388 VM_11325 VM_11325 IPR036390 VM_11325 VM_11330 IPR000791 GPR1/FUN34/yaaH VM_11335 IPR000726 Glycoside hydrolase, family 19, catalytic VM_11335 IPR003610 Carbohydrate-binding module family 5/12 VM_11335 IPR023346 Lysozyme-like domain VM_11335 IPR036573 VM_11335 VM_11340 IPR001674 GMP synthase, C-terminal VM_11340 IPR004739 GMP synthase, N-terminal VM_11340 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_11340 IPR017926 Glutamine amidotransferase VM_11340 IPR022310 NAD/GMP synthase VM_11340 IPR022955 GMP synthase VM_11340 IPR029062 Class I glutamine amidotransferase-like VM_11345 IPR000644 CBS domain VM_11345 IPR001093 IMP dehydrogenase/GMP reductase VM_11345 IPR005990 Inosine-5'-monophosphate dehydrogenase VM_11345 IPR013785 Aldolase-type TIM barrel VM_11345 IPR015875 IMP dehydrogenase / GMP reductase, conserved site VM_11350 IPR003753 Exonuclease VII, large subunit VM_11350 IPR020579 Exonuclease VII, large subunit, C-terminal VM_11350 IPR025824 OB-fold nucleic acid binding domain VM_11355 IPR010807 Protein of unknown function DUF1407 VM_11355 IPR029037 YfgJ-like VM_11360 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain VM_11365 IPR005225 Small GTP-binding protein domain VM_11365 IPR006073 GTP binding domain VM_11365 IPR015946 K homology domain-like, alpha/beta VM_11365 IPR016484 GTP-binding protein EngA VM_11365 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_11365 IPR032859 VM_11365 VM_11370 IPR002372 Pyrrolo-quinoline quinone repeat VM_11370 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily VM_11370 IPR015943 WD40/YVTN repeat-like-containing domain VM_11370 IPR017687 Outer membrane protein assembly factor BamB VM_11370 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VM_11375 IPR011990 Tetratricopeptide-like helical domain VM_11375 IPR018704 Domain of unknown function DUF09976 VM_11375 IPR026039 Uncharacterised protein family UPF0070 VM_11380 IPR004154 Anticodon-binding VM_11380 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit VM_11380 IPR015807 Histidine-tRNA ligase VM_11380 IPR036621 VM_11380 VM_11385 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type VM_11385 IPR011005 Dihydropteroate synthase-like VM_11385 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial VM_11385 IPR036849 VM_11385 VM_11390 IPR001387 Cro/C1-type helix-turn-helix domain VM_11390 IPR010982 Lambda repressor-like, DNA-binding domain VM_11390 IPR025194 Domain of unknown function DUF4115 VM_11395 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr VM_11395 IPR007197 Radical SAM VM_11395 IPR013785 Aldolase-type TIM barrel VM_11395 IPR027492 Dual-specificity RNA methyltransferase RlmN VM_11400 IPR001564 Nucleoside diphosphate kinase VM_11400 IPR023005 Nucleoside diphosphate kinase, active site VM_11400 IPR034907 VM_11400 VM_11400 IPR036850 VM_11400 VM_11405 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal VM_11405 IPR008330 Peptidase M17, peptidase B VM_11405 IPR011356 Leucine aminopeptidase/peptidase B VM_11410 IPR007479 ISC system FeS cluster assembly, IscX VM_11410 IPR036762 VM_11410 VM_11415 IPR001041 2Fe-2S ferredoxin-type domain VM_11415 IPR001055 Adrenodoxin VM_11415 IPR011536 Ferredoxin, 2Fe-2S type VM_11415 IPR012675 Beta-grasp domain VM_11415 IPR018298 Adrenodoxin, iron-sulphur binding site VM_11415 IPR036010 VM_11415 VM_11420 IPR010236 ISC system FeS cluster assembly, HscA chaperone VM_11420 IPR013126 Heat shock protein 70 family VM_11420 IPR018181 Heat shock protein 70, conserved site VM_11420 IPR029047 Heat shock protein 70kD, peptide-binding domain VM_11420 IPR029048 Heat shock protein 70kD, C-terminal domain VM_11425 IPR001623 DnaJ domain VM_11425 IPR004640 Co-chaperone Hsc20 VM_11425 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain VM_11425 IPR036386 VM_11425 VM_11425 IPR036869 VM_11425 VM_11430 IPR000361 FeS cluster biogenesis VM_11430 IPR011302 ISC system FeS cluster assembly, IscA scaffold VM_11430 IPR016092 FeS cluster insertion protein VM_11430 IPR017870 FeS cluster insertion, C-terminal, conserved site VM_11430 IPR035903 VM_11430 VM_11435 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal VM_11435 IPR011339 ISC system FeS cluster assembly, IscU scaffold VM_11440 IPR000192 Aminotransferase class V domain VM_11440 IPR010240 Cysteine desulfurase VM_11440 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VM_11440 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VM_11440 IPR015424 Pyridoxal phosphate-dependent transferase VM_11440 IPR016454 Cysteine desulfurase, NifS VM_11440 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site VM_11445 IPR000944 Transcription regulator Rrf2-like VM_11445 IPR010242 Transcription factor HTH, IscR VM_11445 IPR030489 VM_11445 VM_11445 IPR036388 VM_11445 VM_11445 IPR036390 VM_11445 VM_11450 IPR001537 tRNA/rRNA methyltransferase, SpoU type VM_11450 IPR004384 RNA methyltransferase TrmH, group 1 VM_11450 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VM_11450 IPR029028 Alpha/beta knot methyltransferases VM_11455 IPR000760 Inositol monophosphatase VM_11455 IPR020550 Inositol monophosphatase, conserved site VM_11455 IPR020583 Inositol monophosphatase, metal-binding site VM_11455 IPR022337 Inositol monophosphatase, SuhB VM_11460 IPR005665 Protein-export membrane protein SecF, bacterial VM_11460 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VM_11460 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VM_11460 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VM_11465 IPR001036 Acriflavin resistance protein VM_11465 IPR005791 Protein translocase subunit SecD VM_11465 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VM_11465 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VM_11465 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VM_11465 IPR027398 SecD export protein N-terminal TM domain VM_11470 IPR003849 Preprotein translocase YajC VM_11475 IPR002616 tRNA-guanine(15) transglycosylase-like VM_11475 IPR004803 Queuine tRNA-ribosyltransferase VM_11475 IPR036511 VM_11475 VM_11485 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA VM_11485 IPR036100 VM_11485 VM_11490 IPR000644 CBS domain VM_11495 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_11495 IPR024478 4HB MCP domain VM_11495 IPR032255 VM_11495 VM_11500 IPR006254 Isocitrate lyase VM_11500 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain VM_11500 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site VM_11505 IPR001465 Malate synthase VM_11505 IPR006252 Malate synthase A VM_11505 IPR011076 Malate synthase-like VM_11505 IPR019830 Malate synthase, conserved site VM_11510 IPR000847 Transcription regulator HTH, LysR VM_11510 IPR005119 LysR, substrate-binding VM_11510 IPR036388 VM_11510 VM_11510 IPR036390 VM_11510 VM_11515 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant VM_11515 IPR019479 Peroxiredoxin, C-terminal VM_11515 IPR024706 Peroxiredoxin, AhpC-type VM_11515 IPR036249 VM_11515 VM_11520 IPR005627 Copper homeostasis protein CutC VM_11520 IPR023648 Copper homeostasis CutC domain VM_11520 IPR036822 VM_11520 VM_11525 IPR016898 Polyphosphate kinase 2 VM_11525 IPR022486 Polyphosphate kinase 2, PA0141 VM_11525 IPR022488 Polyphosphate kinase-2-related VM_11525 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_11530 IPR026022 PhoU domain VM_11530 IPR028366 Phosphate transport system protein PhoU VM_11530 IPR038078 VM_11530 VM_11535 IPR003439 ABC transporter-like VM_11535 IPR003593 AAA+ ATPase domain VM_11535 IPR005670 Phosphate transport system permease protein 1 VM_11535 IPR017871 ABC transporter, conserved site VM_11535 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_11540 IPR000515 MetI-like domain VM_11540 IPR005672 Phosphate transport system permease protein PstA VM_11540 IPR035906 VM_11540 VM_11545 IPR000515 MetI-like domain VM_11545 IPR035906 VM_11545 VM_11545 IPR036322 VM_11545 VM_11550 IPR003414 Polyphosphate kinase VM_11550 IPR024953 Polyphosphate kinase middle domain VM_11550 IPR025198 Polyphosphate kinase N-terminal domain VM_11550 IPR025200 Polyphosphate kinase C-terminal domain VM_11550 IPR036830 VM_11550 VM_11550 IPR036832 VM_11550 VM_11555 IPR003695 Ppx/GppA phosphatase VM_11555 IPR022371 Exopolyphosphatase VM_11555 IPR030673 VM_11555 VM_11560 IPR011862 Phosphate binding protein VM_11560 IPR024370 PBP domain VM_11565 IPR000014 PAS domain VM_11565 IPR003594 Histidine kinase-like ATPase, C-terminal domain VM_11565 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain VM_11565 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_11565 IPR013767 PAS fold VM_11565 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR VM_11565 IPR021766 Protein of unknown function DUF3329 VM_11565 IPR035965 VM_11565 VM_11565 IPR036097 VM_11565 VM_11565 IPR036890 VM_11565 VM_11570 IPR001789 Signal transduction response regulator, receiver domain VM_11570 IPR001867 Signal transduction response regulator, C-terminal VM_11570 IPR011006 CheY-like superfamily VM_11570 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB VM_11570 IPR036388 VM_11570 VM_11575 IPR007476 Putative exonuclease, RdgC VM_11580 IPR001539 Peptidase U32 VM_11580 IPR032525 VM_11580 VM_11585 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VM_11585 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VM_11590 IPR007815 Erythromycin esterase VM_11595 IPR000415 Nitroreductase-like VM_11595 IPR016446 Flavin oxidoreductase Frp family VM_11595 IPR029479 Nitroreductase VM_11600 IPR014347 Tautomerase/MIF superfamily VM_11600 IPR015017 Protein of unknown function DUF1904 VM_11605 IPR002925 Dienelactone hydrolase VM_11605 IPR029058 Alpha/Beta hydrolase fold VM_11640 IPR001270 ClpA/B family VM_11640 IPR003593 AAA+ ATPase domain VM_11640 IPR003959 ATPase, AAA-type, core VM_11640 IPR004176 Clp, N-terminal VM_11640 IPR017730 Chaperonin ClpB VM_11640 IPR018368 ClpA/B, conserved site 1 VM_11640 IPR019489 Clp ATPase, C-terminal VM_11640 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_11640 IPR028299 ClpA/B, conserved site 2 VM_11640 IPR036628 VM_11640 VM_11645 IPR003730 Multi-copper polyphenol oxidoreductase, laccase VM_11645 IPR011324 Cytotoxic necrotizing factor-like, catalytic VM_11645 IPR038371 VM_11645 VM_11650 IPR002942 RNA-binding S4 domain VM_11650 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F VM_11650 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site VM_11650 IPR006225 Pseudouridine synthase, RluC/RluD VM_11650 IPR020103 Pseudouridine synthase, catalytic domain VM_11650 IPR036986 VM_11650 VM_11655 IPR011990 Tetratricopeptide-like helical domain VM_11655 IPR017689 Outer membrane protein assembly factor BamD VM_11655 IPR039565 VM_11655 VM_11660 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein VM_11660 IPR036567 VM_11660 VM_11665 IPR001086 Prephenate dehydratase VM_11665 IPR002701 Chorismate mutase VM_11665 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase VM_11665 IPR010952 Chorismate mutase, gammaproteobacteria VM_11665 IPR018528 Prephenate dehydratase, conserved site VM_11665 IPR036263 VM_11665 VM_11665 IPR036979 VM_11665 VM_11670 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein VM_11670 IPR006059 Bacterial extracellular solute-binding, family 1 VM_11675 IPR000160 GGDEF domain VM_11675 IPR001633 EAL domain VM_11675 IPR029787 Nucleotide cyclase VM_11675 IPR035919 VM_11675 VM_11680 IPR002786 Non-canonical purine NTP phosphatase VM_11680 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 VM_11680 IPR029001 Inosine triphosphate pyrophosphatase-like VM_11685 IPR000831 Trp repressor VM_11685 IPR010921 Trp repressor/replication initiator VM_11685 IPR013335 Trp repressor, bacterial VM_11685 IPR038116 VM_11685 VM_11690 IPR008258 Lytic transglycosylase-like SLT domain VM_11690 IPR008939 Lytic transglycosylase, superhelical U-shaped VM_11690 IPR012289 Lytic transglycosylase, superhelical linker VM_11690 IPR023346 Lysozyme-like domain VM_11690 IPR037061 VM_11690 VM_11695 IPR003439 ABC transporter-like VM_11695 IPR003593 AAA+ ATPase domain VM_11695 IPR017871 ABC transporter, conserved site VM_11695 IPR022374 ABC transporter, ATP-binding protein, ChvD VM_11695 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_11695 IPR032781 VM_11695 VM_11700 IPR009875 PilZ domain VM_11700 IPR027021 Cyclic di-GMP binding protein, PA4608 type VM_11705 IPR002701 Chorismate mutase VM_11705 IPR003099 Prephenate dehydrogenase VM_11705 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein VM_11705 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like VM_11705 IPR011277 Chorismate mutase, T-protein VM_11705 IPR036263 VM_11705 VM_11705 IPR036291 VM_11705 VM_11705 IPR036979 VM_11705 VM_11710 IPR006218 DAHP synthetase I/KDSA VM_11710 IPR006219 DHAP synthase, class 1 VM_11710 IPR013785 Aldolase-type TIM barrel VM_11715 IPR003018 GAF domain VM_11715 IPR010559 Signal transduction histidine kinase, internal region VM_11715 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region VM_11715 IPR029016 GAF domain-like VM_11715 IPR036890 VM_11715 VM_11720 IPR001789 Signal transduction response regulator, receiver domain VM_11720 IPR007492 LytTR DNA-binding domain VM_11720 IPR011006 CheY-like superfamily VM_11725 IPR001764 Glycoside hydrolase, family 3, N-terminal VM_11725 IPR017853 Glycoside hydrolase, superfamily VM_11725 IPR019800 Glycoside hydrolase, family 3, active site VM_11725 IPR022956 Beta-hexosaminidase, bacterial VM_11725 IPR036962 VM_11725 VM_11730 IPR005338 Anhydro-N-acetylmuramic acid kinase VM_11735 IPR001347 Sugar isomerase (SIS) VM_11735 IPR005486 Glucokinase regulatory protein, conserved site VM_11735 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ VM_11740 IPR003148 Regulator of K+ conductance, N-terminal VM_11740 IPR006153 Cation/H+ exchanger VM_11740 IPR036291 VM_11740 VM_11740 IPR038770 VM_11740 VM_11745 IPR021242 Protein of unknown function DUF2799 VM_11750 IPR003706 Carbon starvation protein CstA VM_11750 IPR025299 CstA C-terminal domain VM_11755 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase VM_11760 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain VM_11765 IPR001872 Peptidase A8, signal peptidase II VM_11770 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site VM_11770 IPR002300 Aminoacyl-tRNA synthetase, class Ia VM_11770 IPR002301 Isoleucine-tRNA ligase VM_11770 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain VM_11770 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding VM_11770 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase VM_11770 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding VM_11770 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_11770 IPR023585 Isoleucine-tRNA ligase, type 1 VM_11775 IPR002606 Riboflavin kinase, bacterial VM_11775 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_11775 IPR015864 FAD synthetase VM_11775 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic VM_11775 IPR023465 Riboflavin kinase domain VM_11780 IPR004268 Flagellin assembly, membrane protein MviN VM_11785 IPR002583 Ribosomal protein S20 VM_11785 IPR036510 VM_11785 VM_11790 IPR001845 HTH ArsR-type DNA-binding domain VM_11790 IPR036388 VM_11790 VM_11790 IPR036390 VM_11790 VM_11795 IPR002559 Transposase, IS4-like VM_11795 IPR003201 Transposase Tn5, dimerisation VM_11795 IPR012337 Ribonuclease H-like domain VM_11795 IPR014735 Transposase, Tn5-like, N-terminal VM_11795 IPR014736 Transposase, Tn5-like, core VM_11795 IPR014737 Transposase, Tn5-like, C-terminal VM_11795 IPR038215 VM_11795 VM_11800 IPR000847 Transcription regulator HTH, LysR VM_11800 IPR005119 LysR, substrate-binding VM_11800 IPR036388 VM_11800 VM_11800 IPR036390 VM_11800 VM_11805 IPR003841 Sodium-dependent phosphate transport protein VM_11810 IPR000398 Thymidylate synthase VM_11810 IPR020940 Thymidylate synthase, active site VM_11810 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain VM_11810 IPR036926 VM_11810 VM_11815 IPR001640 Prolipoprotein diacylglyceryl transferase VM_11820 IPR002781 Transmembrane protein TauE like VM_11825 IPR000121 PEP-utilising enzyme, C-terminal VM_11825 IPR003018 GAF domain VM_11825 IPR006318 Phosphoenolpyruvate-utilising enzyme VM_11825 IPR008279 PEP-utilising enzyme, mobile domain VM_11825 IPR008731 Phosphotransferase system, enzyme I N-terminal VM_11825 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain VM_11825 IPR018274 PEP-utilising enzyme, active site VM_11825 IPR023151 PEP-utilising enzyme, conserved site VM_11825 IPR029016 GAF domain-like VM_11825 IPR036618 VM_11825 VM_11825 IPR036637 VM_11825 VM_11830 IPR000086 NUDIX hydrolase domain VM_11830 IPR015797 NUDIX hydrolase domain-like VM_11830 IPR020084 NUDIX hydrolase, conserved site VM_11830 IPR020476 NUDIX hydrolase VM_11830 IPR022927 RNA pyrophosphohydrolase RppH VM_11835 IPR004230 DNA mismatch repair protein MutH VM_11835 IPR011335 Restriction endonuclease type II-like VM_11835 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II VM_11835 IPR037057 VM_11835 VM_11840 IPR023210 NADP-dependent oxidoreductase domain VM_11840 IPR036812 VM_11840 VM_11855 IPR002078 RNA polymerase sigma factor 54 interaction domain VM_11855 IPR002197 DNA binding HTH domain, Fis-type VM_11855 IPR003593 AAA+ ATPase domain VM_11855 IPR009057 Homeodomain-like VM_11855 IPR011006 CheY-like superfamily VM_11855 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VM_11855 IPR025944 Sigma-54 interaction domain, conserved site VM_11855 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_11860 IPR002313 Lysine-tRNA ligase, class II VM_11860 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) VM_11860 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type VM_11860 IPR012340 Nucleic acid-binding, OB-fold VM_11860 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal VM_11865 IPR000352 Peptide chain release factor class I/class II VM_11865 IPR004374 Peptide chain release factor 2 VM_11865 IPR005139 Peptide chain release factor VM_11870 IPR004685 Branched-chain amino acid transport system II carrier protein VM_11880 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site VM_11880 IPR001650 Helicase, C-terminal VM_11880 IPR011545 DEAD/DEAH box helicase domain VM_11880 IPR014001 Helicase, superfamily 1/2, ATP-binding domain VM_11880 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_11880 IPR028621 ATP-dependent RNA helicase SrmB VM_11885 IPR000795 Elongation factor, GTP-binding domain VM_11885 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 VM_11885 IPR004548 Peptide chain release factor 3 VM_11885 IPR005225 Small GTP-binding protein domain VM_11885 IPR009000 Translation protein, beta-barrel domain VM_11885 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_11885 IPR031157 VM_11885 VM_11885 IPR032090 VM_11885 VM_11885 IPR035647 VM_11885 VM_11885 IPR038467 VM_11885 VM_11890 IPR000160 GGDEF domain VM_11890 IPR001633 EAL domain VM_11890 IPR029787 Nucleotide cyclase VM_11890 IPR035919 VM_11890 VM_11895 IPR000182 GNAT domain VM_11895 IPR006464 Ribosomal-protein-alanine acetyltransferase VM_11895 IPR016181 Acyl-CoA N-acyltransferase VM_11900 IPR004615 DNA polymerase III, psi subunit VM_11900 IPR036654 VM_11900 VM_11905 IPR016181 Acyl-CoA N-acyltransferase VM_11910 IPR003033 SCP2 sterol-binding domain VM_11910 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT VM_11910 IPR036527 VM_11910 VM_11915 IPR000014 PAS domain VM_11915 IPR000160 GGDEF domain VM_11915 IPR001633 EAL domain VM_11915 IPR013656 PAS fold-4 VM_11915 IPR029787 Nucleotide cyclase VM_11915 IPR035919 VM_11915 VM_11915 IPR035965 VM_11915 VM_11920 IPR001539 Peptidase U32 VM_11925 IPR001539 Peptidase U32 VM_11930 IPR002528 Multi antimicrobial extrusion protein VM_11935 IPR000835 MarR-type HTH domain VM_11935 IPR036388 VM_11935 VM_11935 IPR036390 VM_11935 VM_11940 IPR002559 Transposase, IS4-like VM_11940 IPR003201 Transposase Tn5, dimerisation VM_11940 IPR012337 Ribonuclease H-like domain VM_11940 IPR014735 Transposase, Tn5-like, N-terminal VM_11940 IPR014736 Transposase, Tn5-like, core VM_11940 IPR014737 Transposase, Tn5-like, C-terminal VM_11940 IPR038215 VM_11940 VM_11945 IPR011990 Tetratricopeptide-like helical domain VM_11945 IPR019734 Tetratricopeptide repeat VM_11945 IPR023605 Lipoprotein NlpI VM_11950 IPR001247 Exoribonuclease, phosphorolytic domain 1 VM_11950 IPR003029 Ribosomal protein S1, RNA-binding domain VM_11950 IPR004087 K Homology domain VM_11950 IPR004088 K Homology domain, type 1 VM_11950 IPR012162 Polyribonucleotide nucleotidyltransferase VM_11950 IPR012340 Nucleic acid-binding, OB-fold VM_11950 IPR015847 Exoribonuclease, phosphorolytic domain 2 VM_11950 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain VM_11950 IPR020568 Ribosomal protein S5 domain 2-type fold VM_11950 IPR022967 RNA-binding domain, S1 VM_11950 IPR027408 PNPase/RNase PH domain VM_11950 IPR036345 VM_11950 VM_11950 IPR036612 VM_11950 VM_11955 IPR000589 Ribosomal protein S15 VM_11955 IPR005290 Ribosomal protein S15, bacterial-type VM_11955 IPR009068 S15/NS1, RNA-binding VM_11960 IPR002501 Pseudouridine synthase II VM_11960 IPR014780 tRNA pseudouridine synthase II, TruB VM_11960 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal VM_11960 IPR015947 PUA-like domain VM_11960 IPR020103 Pseudouridine synthase, catalytic domain VM_11960 IPR032819 VM_11960 VM_11960 IPR036974 VM_11960 VM_11965 IPR000238 Ribosome-binding factor A VM_11965 IPR015946 K homology domain-like, alpha/beta VM_11965 IPR020053 Ribosome-binding factor A, conserved site VM_11965 IPR023799 Ribosome-binding factor A domain VM_11970 IPR000178 Translation initiation factor aIF-2, bacterial-like VM_11970 IPR000795 Elongation factor, GTP-binding domain VM_11970 IPR005225 Small GTP-binding protein domain VM_11970 IPR006847 Translation initiation factor IF-2, N-terminal VM_11970 IPR009000 Translation protein, beta-barrel domain VM_11970 IPR009061 DNA binding domain, putative VM_11970 IPR013575 Initiation factor 2 associated domain, bacterial VM_11970 IPR023115 Translation initiation factor IF- 2, domain 3 VM_11970 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_11970 IPR036925 VM_11970 VM_11975 IPR004087 K Homology domain VM_11975 IPR009019 K homology domain, prokaryotic type VM_11975 IPR010213 Transcription termination factor NusA VM_11975 IPR010214 Transcription termination factor NusA, C-terminal duplication VM_11975 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical VM_11975 IPR012340 Nucleic acid-binding, OB-fold VM_11975 IPR013735 Transcription factor NusA, N-terminal VM_11975 IPR015946 K homology domain-like, alpha/beta VM_11975 IPR022967 RNA-binding domain, S1 VM_11975 IPR025249 KH domain, NusA-like VM_11975 IPR030842 VM_11975 VM_11975 IPR036555 VM_11975 VM_11980 IPR003728 Ribosome maturation factor RimP VM_11980 IPR028989 Ribosome maturation factor RimP, N-terminal VM_11980 IPR028998 Ribosome maturation factor RimP, C-terminal VM_11980 IPR035956 VM_11980 VM_11980 IPR036847 VM_11980 VM_11995 IPR004692 Preprotein translocase SecG subunit VM_12005 IPR005841 Alpha-D-phosphohexomutase superfamily VM_12005 IPR005843 Alpha-D-phosphohexomutase, C-terminal VM_12005 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I VM_12005 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II VM_12005 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III VM_12005 IPR006352 Phosphoglucosamine mutase VM_12005 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III VM_12005 IPR016066 Alpha-D-phosphohexomutase, conserved site VM_12005 IPR036900 VM_12005 VM_12010 IPR000489 Pterin-binding VM_12010 IPR006390 Dihydropteroate synthase VM_12010 IPR011005 Dihydropteroate synthase-like VM_12015 IPR000642 Peptidase M41 VM_12015 IPR003593 AAA+ ATPase domain VM_12015 IPR003959 ATPase, AAA-type, core VM_12015 IPR003960 ATPase, AAA-type, conserved site VM_12015 IPR005936 Peptidase, FtsH VM_12015 IPR011546 Peptidase M41, FtsH extracellular VM_12015 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_12015 IPR037219 VM_12015 VM_12020 IPR002877 Ribosomal RNA methyltransferase FtsJ domain VM_12020 IPR015507 Ribosomal RNA large subunit methyltransferase E VM_12020 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VM_12025 IPR001890 RNA-binding, CRM domain VM_12025 IPR017924 RNA-binding protein YhbY VM_12025 IPR035920 VM_12025 VM_12030 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal VM_12030 IPR006359 Transcription elongation factor GreA VM_12030 IPR018151 Transcription elongation factor, GreA/GreB, conserved site VM_12030 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal VM_12030 IPR023459 Transcription elongation factor GreA/GreB family VM_12030 IPR028624 Transcription elongation factor GreA/GreB VM_12030 IPR036805 VM_12030 VM_12030 IPR036953 VM_12030 VM_12035 IPR023614 Porin domain VM_12040 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C VM_12040 IPR012338 Beta-lactamase/transpeptidase-like VM_12045 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site VM_12045 IPR002305 Aminoacyl-tRNA synthetase, class Ic VM_12045 IPR002307 Tyrosine-tRNA ligase VM_12045 IPR002942 RNA-binding S4 domain VM_12045 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_12045 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 VM_12045 IPR036986 VM_12045 VM_12050 IPR011055 Duplicated hybrid motif VM_12050 IPR013731 Opacity-associated protein A, N-terminal VM_12050 IPR016047 Peptidase M23 VM_12055 IPR001036 Acriflavin resistance protein VM_12055 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VM_12060 IPR006143 RND efflux pump, membrane fusion protein VM_12060 IPR032317 VM_12060 VM_12065 IPR000361 FeS cluster biogenesis VM_12065 IPR016092 FeS cluster insertion protein VM_12065 IPR017870 FeS cluster insertion, C-terminal, conserved site VM_12065 IPR023063 Iron-sulfur cluster insertion protein ErpA VM_12065 IPR035903 VM_12065 VM_12075 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase VM_12075 IPR005814 Aminotransferase class-III VM_12075 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VM_12075 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VM_12075 IPR015424 Pyridoxal phosphate-dependent transferase VM_12085 IPR002549 Uncharacterised protein family UPF0118 VM_12090 IPR002052 DNA methylase, N-6 adenine-specific, conserved site VM_12090 IPR007848 Methyltransferase small domain VM_12090 IPR013675 Methyltransferase small, N-terminal VM_12090 IPR023543 rRNA small subunit methyltransferase C VM_12090 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VM_12095 IPR000014 PAS domain VM_12095 IPR001789 Signal transduction response regulator, receiver domain VM_12095 IPR003594 Histidine kinase-like ATPase, C-terminal domain VM_12095 IPR003660 HAMP linker domain VM_12095 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain VM_12095 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_12095 IPR011006 CheY-like superfamily VM_12095 IPR035965 VM_12095 VM_12095 IPR036097 VM_12095 VM_12095 IPR036890 VM_12095 VM_12100 IPR000914 Bacterial extracellular solute-binding protein, family 5 VM_12100 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site VM_12100 IPR030678 VM_12100 VM_12105 IPR000515 MetI-like domain VM_12105 IPR035906 VM_12105 VM_12110 IPR000515 MetI-like domain VM_12110 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VM_12110 IPR035906 VM_12110 VM_12115 IPR003439 ABC transporter-like VM_12115 IPR003593 AAA+ ATPase domain VM_12115 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal VM_12115 IPR017871 ABC transporter, conserved site VM_12115 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_12120 IPR003439 ABC transporter-like VM_12120 IPR003593 AAA+ ATPase domain VM_12120 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal VM_12120 IPR017871 ABC transporter, conserved site VM_12120 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_12125 IPR001701 Glycoside hydrolase, family 9 VM_12125 IPR004197 Glycoside hydrolase, family 9, N-terminal, Ig-like VM_12125 IPR008928 Six-hairpin glycosidase-like VM_12125 IPR012341 Six-hairpin glycosidase VM_12125 IPR013783 Immunoglobulin-like fold VM_12125 IPR014756 Immunoglobulin E-set VM_12130 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type VM_12135 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal VM_12135 IPR015883 Glycoside hydrolase family 20, catalytic core VM_12135 IPR017853 Glycoside hydrolase, superfamily VM_12135 IPR025705 Beta-hexosaminidase VM_12135 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like VM_12140 IPR008928 Six-hairpin glycosidase-like VM_12140 IPR009342 Putative carbohydrate binding domain VM_12140 IPR010383 Glycosyltransferase 36 VM_12140 IPR011013 Galactose mutarotase-like domain VM_12140 IPR012341 Six-hairpin glycosidase VM_12140 IPR033432 VM_12140 VM_12140 IPR037018 VM_12140 VM_12145 IPR005841 Alpha-D-phosphohexomutase superfamily VM_12145 IPR005843 Alpha-D-phosphohexomutase, C-terminal VM_12145 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I VM_12145 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II VM_12145 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III VM_12145 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III VM_12145 IPR036900 VM_12145 VM_12150 IPR003439 ABC transporter-like VM_12150 IPR003593 AAA+ ATPase domain VM_12150 IPR008995 Molybdate/tungstate binding, C-terminal VM_12150 IPR013611 Transport-associated OB, type 2 VM_12150 IPR017871 ABC transporter, conserved site VM_12150 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_12155 IPR000515 MetI-like domain VM_12155 IPR035906 VM_12155 VM_12160 IPR026045 Ferric binding protein VM_12165 IPR018047 Ammonium transporter, conserved site VM_12165 IPR019879 Ammonium transporter, marine subtype VM_12165 IPR024041 Ammonium transporter AmtB-like domain VM_12165 IPR029020 Ammonium/urea transporter VM_12170 IPR002187 Nitrogen regulatory protein PII VM_12170 IPR002332 Nitrogen regulatory protein P-II, urydylation site VM_12170 IPR011322 Nitrogen regulatory PII-like, alpha/beta VM_12170 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VM_12170 IPR017918 Nitrogen regulatory protein PII, conserved site VM_12175 IPR008249 Uncharacterised protein family UPF0231 VM_12180 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha VM_12180 IPR004406 Aconitase B, bacterial VM_12180 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VM_12180 IPR015929 Aconitase B, N-terminal, bacterial VM_12180 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 VM_12180 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 VM_12180 IPR015933 Aconitase B, HEAT-like, bacterial VM_12180 IPR018136 Aconitase family, 4Fe-4S cluster binding site VM_12180 IPR036008 VM_12180 VM_12180 IPR036288 VM_12180 VM_12185 IPR002641 Patatin/Phospholipase A2-related VM_12185 IPR010827 Surface antigen variable number VM_12185 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VM_12190 IPR001264 Glycosyl transferase, family 51 VM_12190 IPR001460 Penicillin-binding protein, transpeptidase VM_12190 IPR011813 Penicillin-binding protein 1B VM_12190 IPR012338 Beta-lactamase/transpeptidase-like VM_12190 IPR023346 Lysozyme-like domain VM_12190 IPR028166 Bifunctional transglycosylase second domain VM_12190 IPR036950 VM_12190 VM_12195 IPR001650 Helicase, C-terminal VM_12195 IPR007502 Helicase-associated domain VM_12195 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type VM_12195 IPR011545 DEAD/DEAH box helicase domain VM_12195 IPR013689 RNA helicase, ATP-dependent, HrpB type, C-terminal VM_12195 IPR014001 Helicase, superfamily 1/2, ATP-binding domain VM_12195 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_12200 IPR005224 Sugar fermentation stimulation protein VM_12205 IPR000962 Zinc finger, DksA/TraR C4-type VM_12205 IPR012784 RNA polymerase-binding transcription factor DksA VM_12205 IPR020458 Zinc finger, DksA/TraR C4-type conserved site VM_12205 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria VM_12205 IPR037187 VM_12205 VM_12210 IPR000924 Glutamyl/glutaminyl-tRNA synthetase VM_12210 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_12210 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain VM_12210 IPR022380 Glutamyl-Q tRNA(Asp) synthetase VM_12215 IPR002646 Poly A polymerase, head domain VM_12215 IPR010206 Poly(A) polymerase I VM_12215 IPR025866 Polymerase A arginine-rich C-terminal domain VM_12215 IPR032828 VM_12215 VM_12220 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK VM_12220 IPR035907 VM_12220 VM_12225 IPR003700 Ketopantoate hydroxymethyltransferase VM_12225 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain VM_12230 IPR003721 Pantoate-beta-alanine ligase VM_12230 IPR004821 Cytidyltransferase-like domain VM_12230 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_12235 IPR000412 ABC-2 transporter VM_12235 IPR013525 ABC-2 type transporter VM_12240 IPR003439 ABC transporter-like VM_12240 IPR003593 AAA+ ATPase domain VM_12240 IPR017871 ABC transporter, conserved site VM_12240 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_12245 IPR002645 STAS domain VM_12245 IPR011547 Sulphate transporter VM_12245 IPR036513 VM_12245 VM_12250 IPR001765 Carbonic anhydrase VM_12250 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site VM_12250 IPR036874 VM_12250 VM_12255 IPR000836 Phosphoribosyltransferase domain VM_12255 IPR005904 Hypoxanthine phosphoribosyl transferase VM_12255 IPR029057 Phosphoribosyltransferase-like VM_12260 IPR001647 DNA-binding HTH domain, TetR-type VM_12260 IPR009057 Homeodomain-like VM_12260 IPR036271 VM_12260 VM_12265 IPR000878 Tetrapyrrole methylase VM_12265 IPR008189 rRNA small subunit methyltransferase I VM_12265 IPR014776 Tetrapyrrole methylase, subdomain 2 VM_12265 IPR014777 Tetrapyrrole methylase, subdomain 1 VM_12265 IPR018063 SAM-dependent methyltransferase RsmI, conserved site VM_12265 IPR035996 VM_12265 VM_12270 IPR007443 Penicillin-binding protein activator LpoA VM_12270 IPR011990 Tetratricopeptide-like helical domain VM_12270 IPR028082 Periplasmic binding protein-like I VM_12275 IPR003509 Uncharacterised protein family UPF0102 VM_12275 IPR011335 Restriction endonuclease type II-like VM_12275 IPR011856 tRNA endonuclease-like domain VM_12280 IPR001347 Sugar isomerase (SIS) VM_12280 IPR004515 Phosphoheptose isomerase VM_12285 IPR007055 BON domain VM_12285 IPR014004 Transport-associated and nodulation domain, bacteria VM_12290 IPR007481 Stringent starvation protein B VM_12290 IPR036760 VM_12290 VM_12295 IPR004045 Glutathione S-transferase, N-terminal VM_12295 IPR004046 Glutathione S-transferase, C-terminal VM_12295 IPR036249 VM_12295 VM_12295 IPR036282 VM_12295 VM_12300 IPR002326 Cytochrome c1 VM_12300 IPR036909 VM_12300 VM_12305 IPR005797 Cytochrome b/b6, N-terminal VM_12305 IPR005798 Cytochrome b/b6, C-terminal VM_12305 IPR016174 Di-haem cytochrome, transmembrane VM_12305 IPR027387 Cytochrome b/b6-like domain VM_12305 IPR030689 VM_12305 VM_12305 IPR036150 VM_12305 VM_12310 IPR005805 Rieske iron-sulphur protein, C-terminal VM_12310 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit VM_12310 IPR017941 Rieske [2Fe-2S] iron-sulphur domain VM_12310 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal VM_12310 IPR036922 VM_12310 VM_12315 IPR000754 Ribosomal protein S9 VM_12315 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VM_12315 IPR020568 Ribosomal protein S5 domain 2-type fold VM_12315 IPR020574 Ribosomal protein S9, conserved site VM_12315 IPR023035 Ribosomal protein S9, bacterial/plastid VM_12320 IPR005822 Ribosomal protein L13 VM_12320 IPR005823 Ribosomal protein L13, bacterial-type VM_12320 IPR023563 Ribosomal protein L13, conserved site VM_12320 IPR036899 VM_12320 VM_12330 IPR005654 ATPase, AFG1-like VM_12330 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_12330 IPR030870 VM_12330 VM_12335 IPR009386 Protein of unknown function DUF1043 VM_12340 IPR001478 PDZ domain VM_12340 IPR001940 Peptidase S1C VM_12340 IPR009003 Trypsin-like cysteine/serine peptidase domain VM_12340 IPR011782 Peptidase S1C, Do VM_12340 IPR036034 VM_12340 VM_12345 IPR001478 PDZ domain VM_12345 IPR001940 Peptidase S1C VM_12345 IPR009003 Trypsin-like cysteine/serine peptidase domain VM_12345 IPR011783 Peptidase S1C, DegS VM_12345 IPR036034 VM_12345 VM_12350 IPR001857 Ribosomal protein L19 VM_12350 IPR008991 Translation protein SH3-like domain VM_12350 IPR018257 Ribosomal protein L19, conserved site VM_12350 IPR038657 VM_12350 VM_12355 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria VM_12355 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain VM_12355 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal VM_12355 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VM_12355 IPR029028 Alpha/beta knot methyltransferases VM_12360 IPR002676 RimM protein VM_12360 IPR009000 Translation protein, beta-barrel domain VM_12360 IPR011033 PRC-barrel-like VM_12360 IPR011961 16S rRNA processing protein RimM VM_12360 IPR027275 PRC-barrel domain VM_12360 IPR036976 VM_12360 VM_12365 IPR000307 Ribosomal protein S16 VM_12365 IPR020592 Ribosomal protein S16, conserved site VM_12365 IPR023803 Ribosomal protein S16 domain VM_12370 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain VM_12370 IPR003593 AAA+ ATPase domain VM_12370 IPR004125 Signal recognition particle, SRP54 subunit, M-domain VM_12370 IPR004780 Signal recognition particle protein Ffh VM_12370 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle VM_12370 IPR022941 Signal recognition particle, SRP54 subunit VM_12370 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_12370 IPR036891 VM_12370 VM_12375 IPR002541 Cytochrome c assembly protein VM_12380 IPR000644 CBS domain VM_12380 IPR002550 Domain of unknown function DUF21 VM_12380 IPR005170 Transporter-associated domain VM_12380 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 VM_12380 IPR036318 VM_12380 VM_12385 IPR003815 S-ribosylhomocysteinase (LuxS) VM_12385 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like VM_12385 IPR037005 VM_12385 VM_12390 IPR006334 Glutamate--cysteine ligase, monofunctional VM_12390 IPR007370 Glutamate--cysteine ligase VM_12390 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain VM_12395 IPR007863 Peptidase M16, C-terminal domain VM_12395 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like VM_12395 IPR011765 Peptidase M16, N-terminal VM_12400 IPR032816 VM_12400 VM_12405 IPR011032 GroES (chaperonin 10)-like VM_12405 IPR013154 Alcohol dehydrogenase GroES-like VM_12405 IPR020843 Polyketide synthase, enoylreductase VM_12405 IPR036291 VM_12405 VM_12410 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit VM_12415 IPR000089 Biotin/lipoyl attachment VM_12415 IPR000891 Pyruvate carboxyltransferase VM_12415 IPR001882 Biotin-binding site VM_12415 IPR003379 Carboxylase, conserved domain VM_12415 IPR005776 Oxaloacetate decarboxylase, alpha subunit VM_12415 IPR011053 Single hybrid motif VM_12415 IPR013785 Aldolase-type TIM barrel VM_12420 IPR005899 Sodium ion-translocating decarboxylase VM_12420 IPR023424 Oxaloacetate decarboxylase gamma chain, probable VM_12465 IPR003751 Carbon storage regulator VM_12465 IPR036107 VM_12465 VM_12470 IPR001048 Aspartate/glutamate/uridylate kinase VM_12470 IPR001341 Aspartate kinase domain VM_12470 IPR005260 Aspartate kinase, monofunctional class VM_12470 IPR018042 Aspartate kinase, conserved site VM_12470 IPR036393 VM_12470 VM_12475 IPR002318 Alanine-tRNA ligase, class IIc VM_12475 IPR003156 DHHA1 domain VM_12475 IPR009000 Translation protein, beta-barrel domain VM_12475 IPR012947 Threonyl/alanyl tRNA synthetase, SAD VM_12475 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain VM_12475 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain VM_12475 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal VM_12475 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria VM_12480 IPR003783 Regulatory protein RecX VM_12480 IPR036388 VM_12480 VM_12485 IPR003593 AAA+ ATPase domain VM_12485 IPR013765 DNA recombination and repair protein RecA VM_12485 IPR020584 DNA recombination/repair protein RecA, conserved site VM_12485 IPR023400 DNA recombination and repair protein RecA, C-terminal VM_12485 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_12490 IPR008136 CinA, C-terminal VM_12490 IPR036653 VM_12490 VM_12495 IPR003439 ABC transporter-like VM_12495 IPR003593 AAA+ ATPase domain VM_12495 IPR005666 Sulphate transport system permease protein 1 VM_12495 IPR008995 Molybdate/tungstate binding, C-terminal VM_12495 IPR017871 ABC transporter, conserved site VM_12495 IPR024765 TOBE-like domain VM_12495 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_12500 IPR000515 MetI-like domain VM_12500 IPR005667 Sulphate ABC transporter permease protein 2 VM_12500 IPR011866 Sulphate ABC transporter, permease protein CysW VM_12500 IPR035906 VM_12500 VM_12505 IPR000515 MetI-like domain VM_12505 IPR005667 Sulphate ABC transporter permease protein 2 VM_12505 IPR011865 Sulphate ABC transporter, permease protein CysT VM_12505 IPR035906 VM_12505 VM_12510 IPR005669 Thiosulphate/Sulfate-binding protein VM_12510 IPR034408 VM_12510 VM_12515 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site VM_12515 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VM_12515 IPR005856 Cysteine synthase K/M VM_12515 IPR005858 Cysteine synthase B VM_12515 IPR036052 VM_12515 VM_12520 IPR000432 DNA mismatch repair protein MutS, C-terminal VM_12520 IPR005748 DNA mismatch repair protein MutS, type 1 VM_12520 IPR007695 DNA mismatch repair protein MutS-like, N-terminal VM_12520 IPR007696 DNA mismatch repair protein MutS, core VM_12520 IPR007860 DNA mismatch repair protein MutS, connector domain VM_12520 IPR007861 DNA mismatch repair protein MutS, clamp VM_12520 IPR016151 DNA mismatch repair protein MutS, N-terminal VM_12520 IPR017261 DNA mismatch repair protein Msh6 VM_12520 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_12520 IPR036187 VM_12520 VM_12520 IPR036678 VM_12520 VM_12525 IPR000943 RNA polymerase sigma-70 VM_12525 IPR007624 RNA polymerase sigma-70 region 3 VM_12525 IPR007627 RNA polymerase sigma-70 region 2 VM_12525 IPR007630 RNA polymerase sigma-70 region 4 VM_12525 IPR009042 RNA polymerase sigma-70 region 1.2 VM_12525 IPR012761 RNA polymerase sigma factor RpoS VM_12525 IPR013324 RNA polymerase sigma factor, region 3/4 VM_12525 IPR013325 RNA polymerase sigma factor, region 2 VM_12525 IPR014284 RNA polymerase sigma-70 like domain VM_12525 IPR036388 VM_12525 VM_12530 IPR011055 Duplicated hybrid motif VM_12530 IPR016047 Peptidase M23 VM_12530 IPR018392 LysM domain VM_12530 IPR036779 VM_12530 VM_12535 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase VM_12535 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VM_12540 IPR002828 Survival protein SurE-like phosphatase/nucleotidase VM_12540 IPR030048 VM_12540 VM_12540 IPR036523 VM_12540 VM_12545 IPR001656 Pseudouridine synthase, TruD VM_12545 IPR020103 Pseudouridine synthase, catalytic domain VM_12545 IPR020119 Pseudouridine synthase TruD, conserved site VM_12550 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase VM_12550 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site VM_12550 IPR036571 VM_12550 VM_12555 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase VM_12555 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site VM_12555 IPR029044 Nucleotide-diphospho-sugar transferases VM_12555 IPR034683 VM_12555 VM_12560 IPR007060 Septum formation initiator FtsL/DivIC VM_12560 IPR023081 Cell division protein FtsB VM_12565 IPR003824 Undecaprenyl-diphosphatase UppP VM_12570 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK VM_12570 IPR035907 VM_12570 VM_12575 IPR006156 Dihydroneopterin aldolase VM_12575 IPR006157 Dihydroneopterin aldolase/epimerase domain VM_12585 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY VM_12590 IPR000073 Alpha/beta hydrolase fold-1 VM_12590 IPR000639 Epoxide hydrolase-like VM_12590 IPR029058 Alpha/Beta hydrolase fold VM_12595 IPR000905 Gcp-like domain VM_12595 IPR017860 Peptidase M22, conserved site VM_12595 IPR017861 Kae1/YgjD family VM_12595 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD VM_12600 IPR001911 Ribosomal protein S21 VM_12600 IPR018278 Ribosomal protein S21, conserved site VM_12600 IPR038380 VM_12600 VM_12605 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related VM_12605 IPR019004 Uncharacterised domain YOR215C, mitochondrial VM_12605 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal VM_12610 IPR002694 Zinc finger, CHC2-type VM_12610 IPR006171 Toprim domain VM_12610 IPR006295 DNA primase, DnaG VM_12610 IPR013173 DNA primase DnaG, DnaB-binding domain VM_12610 IPR013264 DNA primase, catalytic core, N-terminal VM_12610 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal VM_12610 IPR019475 DNA primase, DnaB-helicase binding domain VM_12610 IPR030846 VM_12610 VM_12610 IPR036977 VM_12610 VM_12610 IPR037068 VM_12610 VM_12615 IPR000943 RNA polymerase sigma-70 VM_12615 IPR007127 RNA polymerase sigma factor 70, region 1.1 VM_12615 IPR007624 RNA polymerase sigma-70 region 3 VM_12615 IPR007627 RNA polymerase sigma-70 region 2 VM_12615 IPR007630 RNA polymerase sigma-70 region 4 VM_12615 IPR007631 RNA polymerase sigma factor 70, non-essential domain VM_12615 IPR009042 RNA polymerase sigma-70 region 1.2 VM_12615 IPR012760 RNA polymerase sigma factor RpoD, C-terminal VM_12615 IPR013324 RNA polymerase sigma factor, region 3/4 VM_12615 IPR013325 RNA polymerase sigma factor, region 2 VM_12615 IPR014284 RNA polymerase sigma-70 like domain VM_12615 IPR028630 RNA polymerase sigma factor RpoD VM_12615 IPR036388 VM_12615 VM_12625 IPR002104 Integrase, catalytic VM_12625 IPR004107 Integrase, SAM-like, N-terminal VM_12625 IPR010998 Integrase, Lambda-type, N-terminal VM_12625 IPR011010 DNA breaking-rejoining enzyme, catalytic core VM_12625 IPR013762 Integrase-like, catalytic core VM_12625 IPR025166 Domain of unknown function DUF4102 VM_12625 IPR038488 VM_12625 VM_12630 IPR007685 RelA/SpoT VM_12635 IPR025272 Domain of unknown function DUF4065 VM_12660 IPR006073 GTP binding domain VM_12660 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_12665 IPR010260 Bacteriophage P4, Orf88 VM_12670 IPR026881 WYL domain VM_12680 IPR010652 Protein of unknown function DUF1232 VM_12680 IPR016983 Uncharacterised conserved protein UCP031804 VM_12685 IPR021248 Protein of unknown function DUF2787 VM_12690 IPR021248 Protein of unknown function DUF2787 VM_12695 IPR001405 RadC protein VM_12695 IPR020891 Uncharacterised protein family UPF0758, conserved site VM_12695 IPR025657 RadC-like JAB domain VM_12715 IPR001064 Beta/gamma crystallin VM_12715 IPR011024 Gamma-crystallin-related VM_12725 IPR000719 Protein kinase domain VM_12725 IPR011009 Protein kinase-like domain VM_12730 IPR009612 ImcF-related VM_12730 IPR010623 Domain of unknown function DUF1215 VM_12730 IPR017731 Type VI secretion system, IcmF VM_12730 IPR025743 ImcF-related, N-terminal domain VM_12735 IPR017732 Type IV / VI secretion system, DotU VM_12735 IPR038522 VM_12735 VM_12740 IPR010263 Protein of unknown function DUF876 VM_12745 IPR017734 Type VI secretion system, lipoprotein SciN VM_12745 IPR038706 VM_12745 VM_12750 IPR000253 Forkhead-associated (FHA) domain VM_12750 IPR008984 SMAD/FHA domain VM_12755 IPR001638 Extracellular solute-binding protein, family 3 VM_12760 IPR007487 ABC transporter, substrate-binding protein VM_12765 IPR011701 Major facilitator superfamily VM_12765 IPR036259 VM_12765 VM_12770 IPR011095 D-alanine--D-alanine ligase, C-terminal VM_12770 IPR013815 ATP-grasp fold, subdomain 1 VM_12770 IPR016185 Pre-ATP-grasp domain VM_12775 IPR001270 ClpA/B family VM_12775 IPR003593 AAA+ ATPase domain VM_12775 IPR003959 ATPase, AAA-type, core VM_12775 IPR017729 Type VI secretion system, ATPase ClpV1 VM_12775 IPR018368 ClpA/B, conserved site 1 VM_12775 IPR019489 Clp ATPase, C-terminal VM_12775 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_12775 IPR036628 VM_12775 VM_12780 IPR010732 Protein of unknown function DUF1305 VM_12785 IPR010272 Type VI secretion system, VCA0110 VM_12790 IPR007048 GpW/Gp25/anti-adapter protein IraD VM_12790 IPR017737 Type VI secretion system, lysozyme-related protein VM_12795 IPR010269 Protein of unknown function DUF877 VM_12800 IPR010269 Protein of unknown function DUF877 VM_12805 IPR008312 Uncharacterised conserved protein UCP028301 VM_12810 IPR008514 Type VI secretion system effector, Hcp VM_12810 IPR036624 VM_12810 VM_12815 IPR010657 ImpA, N-terminal VM_12825 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein VM_12825 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset VM_12825 IPR037026 VM_12825 VM_12835 IPR008727 PAAR motif VM_12840 IPR002818 ThiJ/PfpI VM_12840 IPR009057 Homeodomain-like VM_12840 IPR018060 DNA binding HTH domain, AraC-type VM_12840 IPR018062 HTH domain AraC-type, conserved site VM_12840 IPR020449 Transcription regulator HTH, AraC- type VM_12840 IPR029062 Class I glutamine amidotransferase-like VM_12860 IPR002104 Integrase, catalytic VM_12860 IPR010998 Integrase, Lambda-type, N-terminal VM_12860 IPR011010 DNA breaking-rejoining enzyme, catalytic core VM_12860 IPR013762 Integrase-like, catalytic core VM_12860 IPR025166 Domain of unknown function DUF4102 VM_12860 IPR038488 VM_12860 VM_12870 IPR014914 RES VM_12890 IPR001098 DNA-directed DNA polymerase, family A, palm domain VM_12905 IPR018212 Sodium/solute symporter, conserved site VM_12915 IPR026881 WYL domain VM_12925 IPR002123 Phospholipid/glycerol acyltransferase VM_12925 IPR016181 Acyl-CoA N-acyltransferase VM_12930 IPR018389 Bacterial extracellular solute-binding protein, family 7 VM_12930 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like VM_12930 IPR038404 VM_12930 VM_12935 IPR001347 Sugar isomerase (SIS) VM_12935 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising VM_12935 IPR029055 Nucleophile aminohydrolases, N-terminal VM_12940 IPR001034 HTH DeoR N-terminal domain VM_12940 IPR014036 DeoR C-terminal sensor domain VM_12940 IPR018356 Transcription regulator, HTH DeoR-type, conserved site VM_12940 IPR036388 VM_12940 VM_12940 IPR036390 VM_12940 VM_12940 IPR037171 VM_12940 VM_12945 IPR001697 Pyruvate kinase VM_12945 IPR011037 Pyruvate kinase-like, insert domain VM_12945 IPR015793 Pyruvate kinase, barrel VM_12945 IPR015795 Pyruvate kinase, C-terminal VM_12945 IPR015806 Pyruvate kinase, beta-barrel insert domain VM_12945 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain VM_12945 IPR018209 Pyruvate kinase, active site VM_12945 IPR036918 VM_12945 VM_12950 IPR007497 Protein of unknown function DUF541 VM_12955 IPR000847 Transcription regulator HTH, LysR VM_12955 IPR005119 LysR, substrate-binding VM_12955 IPR017685 Transcription regulator ArgP VM_12955 IPR023490 Chromosome initiation inhibitor VM_12955 IPR036388 VM_12955 VM_12955 IPR036390 VM_12955 VM_12960 IPR001123 Lysine-type exporter protein (LYSE/YGGA) VM_12965 IPR006685 Mechanosensitive ion channel MscS VM_12965 IPR006686 Mechanosensitive ion channel MscS, conserved site VM_12965 IPR008910 Conserved TM helix VM_12965 IPR010920 Like-Sm (LSM) domain VM_12965 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 VM_12965 IPR011066 Mechanosensitive ion channel MscS, C-terminal VM_12965 IPR023408 VM_12965 VM_12970 IPR000771 Ketose-bisphosphate aldolase, class-II VM_12970 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype VM_12970 IPR013785 Aldolase-type TIM barrel VM_12975 IPR001576 Phosphoglycerate kinase VM_12975 IPR015824 Phosphoglycerate kinase, N-terminal VM_12975 IPR015911 Phosphoglycerate kinase, conserved site VM_12975 IPR036043 VM_12975 VM_12980 IPR006422 D-erythrose-4-phosphate dehydrogenase VM_12980 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain VM_12980 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain VM_12980 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family VM_12980 IPR036291 VM_12980 VM_12985 IPR000531 TonB-dependent receptor, beta-barrel VM_12985 IPR010916 TonB box, conserved site VM_12985 IPR010917 TonB-dependent receptor, conserved site VM_12985 IPR012910 TonB-dependent receptor, plug VM_12985 IPR036942 VM_12985 VM_12985 IPR037066 VM_12985 VM_12990 IPR000847 Transcription regulator HTH, LysR VM_12990 IPR005119 LysR, substrate-binding VM_12990 IPR036388 VM_12990 VM_12990 IPR036390 VM_12990 VM_12995 IPR005474 Transketolase, N-terminal VM_12995 IPR005475 Transketolase-like, pyrimidine-binding domain VM_12995 IPR005478 Transketolase, bacterial-like VM_12995 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II VM_12995 IPR020826 Transketolase binding site VM_12995 IPR029061 Thiamin diphosphate-binding fold VM_12995 IPR033248 VM_12995 VM_13005 IPR002133 S-adenosylmethionine synthetase VM_13005 IPR022628 S-adenosylmethionine synthetase, N-terminal VM_13005 IPR022629 S-adenosylmethionine synthetase, central domain VM_13005 IPR022630 S-adenosylmethionine synthetase, C-terminal VM_13005 IPR022631 S-adenosylmethionine synthetase, conserved site VM_13005 IPR022636 S-adenosylmethionine synthetase superfamily VM_13010 IPR006640 Domain of unknown function SprT-like VM_13010 IPR023483 Uncharacterised protein family SprT VM_13010 IPR035240 VM_13010 VM_13015 IPR007346 Endonuclease I VM_13020 IPR006700 Ribosomal RNA small subunit methyltransferase E VM_13020 IPR015947 PUA-like domain VM_13020 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VM_13020 IPR029028 Alpha/beta knot methyltransferases VM_13025 IPR004215 Prokaryotic glutathione synthetase, N-terminal VM_13025 IPR004218 Prokaryotic glutathione synthetase, ATP-binding VM_13025 IPR006284 Glutathione synthetase, prokaryotic VM_13025 IPR013815 ATP-grasp fold, subdomain 1 VM_13025 IPR016185 Pre-ATP-grasp domain VM_13030 IPR003774 Protein of unknown function UPF0301 VM_13035 IPR005227 Resolvase, holliday junction-type, YqgF-like VM_13035 IPR006641 YqgF/RNase H-like domain VM_13035 IPR012337 Ribonuclease H-like domain VM_13035 IPR037027 VM_13035 VM_13040 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site VM_13040 IPR002305 Aminoacyl-tRNA synthetase, class Ic VM_13040 IPR002307 Tyrosine-tRNA ligase VM_13040 IPR002942 RNA-binding S4 domain VM_13040 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_13040 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 VM_13040 IPR036986 VM_13040 VM_13045 IPR000792 Transcription regulator LuxR, C-terminal VM_13045 IPR016032 Signal transduction response regulator, C-terminal effector VM_13045 IPR036388 VM_13045 VM_13050 IPR001482 Type II secretion system protein E VM_13050 IPR006321 Pilus retraction protein PilT VM_13050 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_13055 IPR001482 Type II secretion system protein E VM_13055 IPR006321 Pilus retraction protein PilT VM_13055 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_13060 IPR001608 Alanine racemase, N-terminal VM_13060 IPR011078 Uncharacterised protein family UPF0001 VM_13060 IPR029066 PLP-binding barrel VM_13065 IPR000304 Pyrroline-5-carboxylate reductase VM_13065 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like VM_13065 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal VM_13065 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain VM_13065 IPR036291 VM_13065 VM_13070 IPR003425 Uncharacterised protein family Ycf19 VM_13075 IPR003746 Protein of unknown function DUF167 VM_13075 IPR005228 Conserved hypothetical protein CHP00251 VM_13075 IPR036591 VM_13075 VM_13080 IPR025218 Domain of unknown function DUF4426 VM_13085 IPR002637 Ham1-like protein VM_13085 IPR020922 Non-canonical purine NTP pyrophosphatase VM_13085 IPR029001 Inosine triphosphate pyrophosphatase-like VM_13090 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related VM_13090 IPR006638 Elongator protein 3/MiaB/NifB VM_13090 IPR007197 Radical SAM VM_13090 IPR010723 HemN, C-terminal domain VM_13090 IPR023404 Radical SAM, alpha/beta horseshoe VM_13095 IPR003265 HhH-GPD domain VM_13095 IPR011257 DNA glycosylase VM_13100 IPR012338 Beta-lactamase/transpeptidase-like VM_13100 IPR015868 Glutaminase VM_13105 IPR003358 tRNA (guanine-N-7) methyltransferase VM_13105 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VM_13110 IPR003265 HhH-GPD domain VM_13110 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif VM_13110 IPR004035 Endonuclease III, iron-sulphur binding site VM_13110 IPR004036 Endonuclease III-like, conserved site-2 VM_13110 IPR005760 A/G-specific adenine glycosylase MutY VM_13110 IPR011257 DNA glycosylase VM_13110 IPR015797 NUDIX hydrolase domain-like VM_13110 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal VM_13110 IPR029119 MutY, C-terminal VM_13115 IPR007457 Fe(II) trafficking protein YggX VM_13115 IPR036766 VM_13115 VM_13120 IPR000189 Prokaryotic transglycosylase, active site VM_13120 IPR008258 Lytic transglycosylase-like SLT domain VM_13120 IPR023346 Lysozyme-like domain VM_13120 IPR024570 Murein transglycosylase-C, N-terminal VM_13145 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_13145 IPR004090 Chemotaxis methyl-accepting receptor VM_13145 IPR033480 VM_13145 VM_13175 IPR001623 DnaJ domain VM_13175 IPR007791 Heat shock protein DnaJ-like protein DjlA VM_13175 IPR023749 DnaJ-like protein DjlA VM_13175 IPR029024 TerB-like VM_13175 IPR036869 VM_13175 VM_13180 IPR005653 Organic solvent tolerance-like, N-terminal VM_13180 IPR007543 Organic solvent tolerance protein, C-terminal VM_13180 IPR020889 Lipopolysaccharide assembly, LptD VM_13185 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type VM_13185 IPR015391 SurA N-terminal VM_13185 IPR023034 Peptidyl-prolyl isomerase SurA VM_13185 IPR027304 Trigger factor/SurA domain VM_13190 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA VM_13190 IPR037510 VM_13190 VM_13195 IPR001737 Ribosomal RNA adenine methylase transferase VM_13195 IPR011530 Ribosomal RNA adenine dimethylase VM_13195 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site VM_13195 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal VM_13195 IPR023165 rRNA adenine dimethylase-like VM_13195 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VM_13200 IPR007474 ApaG domain VM_13200 IPR023065 Uncharacterised protein family ApaG VM_13200 IPR036767 VM_13200 VM_13205 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) VM_13205 IPR004843 Calcineurin-like phosphoesterase domain, apaH type VM_13205 IPR029052 Metallo-dependent phosphatase-like VM_13210 IPR001796 Dihydrofolate reductase domain VM_13210 IPR012259 Dihydrofolate reductase VM_13210 IPR024072 Dihydrofolate reductase-like domain VM_13215 IPR024528 Domain of unknown function DUF3815 VM_13220 IPR010619 Domain of unknown function DUF1212 VM_13225 IPR006073 GTP binding domain VM_13225 IPR006074 GTP1/OBG, conserved site VM_13225 IPR006169 GTP1/OBG domain VM_13225 IPR014100 GTP-binding protein Obg/CgtA VM_13225 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_13225 IPR035101 VM_13225 VM_13225 IPR036726 VM_13225 VM_13230 IPR001684 Ribosomal protein L27 VM_13230 IPR018261 Ribosomal protein L27, conserved site VM_13235 IPR001787 Ribosomal protein L21 VM_13235 IPR018258 Ribosomal protein L21, conserved site VM_13235 IPR028909 Ribosomal protein L21-like VM_13235 IPR036164 VM_13235 VM_13240 IPR000092 Polyprenyl synthetase VM_13240 IPR008949 Terpenoid synthase VM_13240 IPR033749 VM_13240 VM_13245 IPR002293 Amino acid/polyamine transporter I VM_13245 IPR004754 Amino acid antiporter VM_13250 IPR001236 Lactate/malate dehydrogenase, N-terminal VM_13250 IPR001252 Malate dehydrogenase, active site VM_13250 IPR001557 L-lactate/malate dehydrogenase VM_13250 IPR010097 Malate dehydrogenase, type 1 VM_13250 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal VM_13250 IPR022383 Lactate/malate dehydrogenase, C-terminal VM_13250 IPR023958 Malate dehydrogenase, type 1, bacterial VM_13250 IPR036291 VM_13250 VM_13255 IPR001669 Arginine repressor VM_13255 IPR020899 Arginine repressor, C-terminal VM_13255 IPR020900 Arginine repressor, DNA-binding domain VM_13255 IPR036251 VM_13255 VM_13255 IPR036388 VM_13255 VM_13255 IPR036390 VM_13255 VM_13260 IPR011852 TRAP transporter solute receptor, TAXI family VM_13265 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VM_13265 IPR011853 TRAP transporter, 4TM/12TM fusion protein VM_13265 IPR021814 Protein of unknown function DUF3394 VM_13270 IPR006015 Universal stress protein A VM_13270 IPR006016 UspA VM_13270 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_13275 IPR018638 Domain of unknown function DUF2061, membrane VM_13280 IPR008979 Galactose-binding domain-like VM_13285 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain VM_13285 IPR015943 WD40/YVTN repeat-like-containing domain VM_13285 IPR019405 Lactonase, 7-bladed beta propeller VM_13290 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal VM_13290 IPR015883 Glycoside hydrolase family 20, catalytic core VM_13290 IPR017853 Glycoside hydrolase, superfamily VM_13290 IPR025705 Beta-hexosaminidase VM_13290 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like VM_13295 IPR001734 Sodium/solute symporter VM_13295 IPR038377 VM_13295 VM_13300 IPR006175 YjgF/Yer057p/UK114 family VM_13300 IPR035959 VM_13300 VM_13305 IPR011059 Metal-dependent hydrolase, composite domain VM_13305 IPR013108 Amidohydrolase 3 VM_13305 IPR023100 D-aminoacylase, insert domain VM_13305 IPR032466 VM_13305 VM_13310 IPR001608 Alanine racemase, N-terminal VM_13310 IPR026956 D-serine dehydratase-like domain VM_13310 IPR029066 PLP-binding barrel VM_13315 IPR000281 Helix-turn-helix protein RpiR VM_13315 IPR001347 Sugar isomerase (SIS) VM_13315 IPR009057 Homeodomain-like VM_13315 IPR036388 VM_13315 VM_13330 IPR012893 HipA-like, C-terminal VM_13330 IPR017508 HipA, N-terminal subdomain 1 VM_13340 IPR001387 Cro/C1-type helix-turn-helix domain VM_13340 IPR010982 Lambda repressor-like, DNA-binding domain VM_13355 IPR006555 ATP-dependent helicase, C-terminal VM_13355 IPR006935 Helicase/UvrB domain VM_13355 IPR014001 Helicase, superfamily 1/2, ATP-binding domain VM_13355 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_13360 IPR001584 Integrase, catalytic core VM_13360 IPR009057 Homeodomain-like VM_13360 IPR012337 Ribonuclease H-like domain VM_13360 IPR036397 VM_13360 VM_13375 IPR011010 DNA breaking-rejoining enzyme, catalytic core VM_13375 IPR013762 Integrase-like, catalytic core VM_13380 IPR011010 DNA breaking-rejoining enzyme, catalytic core VM_13390 IPR001584 Integrase, catalytic core VM_13390 IPR009057 Homeodomain-like VM_13390 IPR012337 Ribonuclease H-like domain VM_13390 IPR036397 VM_13390 VM_13400 IPR009671 Regulator of ribonuclease activity B domain VM_13400 IPR016716 Regulator of ribonuclease activity B VM_13400 IPR036701 VM_13400 VM_13405 IPR003876 Arginine deiminase VM_13410 IPR001041 2Fe-2S ferredoxin-type domain VM_13410 IPR001221 Phenol hydroxylase reductase VM_13410 IPR001433 Oxidoreductase FAD/NAD(P)-binding VM_13410 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase VM_13410 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site VM_13410 IPR008333 Oxidoreductase, FAD-binding domain VM_13410 IPR012675 Beta-grasp domain VM_13410 IPR017938 Riboflavin synthase-like beta-barrel VM_13410 IPR036010 VM_13410 VM_13410 IPR039261 VM_13410 VM_13415 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase VM_13415 IPR010048 Hydroxylamine reductase VM_13415 IPR011254 Prismane-like VM_13415 IPR016099 Prismane-like, alpha/beta-sandwich VM_13415 IPR016100 Prismane, alpha-bundle VM_13420 IPR002510 TldD/PmbA VM_13420 IPR025502 TldD VM_13420 IPR035068 VM_13420 VM_13420 IPR036059 VM_13420 VM_13425 IPR001110 Uncharacterised protein family UPF0012, conserved site VM_13425 IPR003010 Carbon-nitrogen hydrolase VM_13425 IPR036526 VM_13425 VM_13430 IPR011836 Conserved hypothetical protein CHP02099 VM_13430 IPR025263 Domain of unknown function DUF3971 VM_13430 IPR032712 VM_13430 VM_13435 IPR003029 Ribosomal protein S1, RNA-binding domain VM_13435 IPR004659 Ribonuclease E/G VM_13435 IPR012340 Nucleic acid-binding, OB-fold VM_13435 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G VM_13435 IPR022967 RNA-binding domain, S1 VM_13440 IPR003697 Maf-like protein VM_13440 IPR029001 Inosine triphosphate pyrophosphatase-like VM_13445 IPR007227 Cell shape-determining protein MreD VM_13445 IPR026034 Cell shape-determining protein MreD, proteobacterial type VM_13450 IPR007221 Rod shape-determining protein MreC VM_13455 IPR004753 Cell shape determining protein MreB/Mrl VM_13460 IPR013320 Concanavalin A-like lectin/glucanase, subgroup VM_13470 IPR012902 Prokaryotic N-terminal methylation site VM_13475 IPR012902 Prokaryotic N-terminal methylation site VM_13480 IPR012902 Prokaryotic N-terminal methylation site VM_13485 IPR012902 Prokaryotic N-terminal methylation site VM_13490 IPR012902 Prokaryotic N-terminal methylation site VM_13500 IPR001992 Type II secretion system conserved site VM_13500 IPR003004 GspF/PilC family VM_13500 IPR018076 Type II secretion system F domain VM_13505 IPR001482 Type II secretion system protein E VM_13505 IPR003593 AAA+ ATPase domain VM_13505 IPR007831 General secretory system II, protein E, N-terminal VM_13505 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_13505 IPR037257 VM_13505 VM_13510 IPR011990 Tetratricopeptide-like helical domain VM_13510 IPR019734 Tetratricopeptide repeat VM_13515 IPR003593 AAA+ ATPase domain VM_13515 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_13520 IPR001775 GspD/PilQ family VM_13520 IPR004846 Type II/III secretion system VM_13520 IPR011514 Secretin, N-terminal VM_13520 IPR011662 Secretin/TonB, short N-terminal VM_13520 IPR013358 Pilus biogenesis, MshL VM_13530 IPR007690 Type II secretion system, protein M VM_13535 IPR016871 MSHA biogenesis protein, MshI VM_13540 IPR000160 GGDEF domain VM_13540 IPR001633 EAL domain VM_13540 IPR029787 Nucleotide cyclase VM_13540 IPR033423 VM_13540 VM_13540 IPR035919 VM_13540 VM_13545 IPR000424 Primosome PriB/single-strand DNA-binding VM_13545 IPR011344 Single-stranded DNA-binding protein VM_13545 IPR012340 Nucleic acid-binding, OB-fold VM_13550 IPR000792 Transcription regulator LuxR, C-terminal VM_13550 IPR016032 Signal transduction response regulator, C-terminal effector VM_13550 IPR036388 VM_13550 VM_13555 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type VM_13555 IPR005835 Nucleotidyl transferase VM_13555 IPR029044 Nucleotide-diphospho-sugar transferases VM_13560 IPR003439 ABC transporter-like VM_13560 IPR004602 UvrABC system subunit A VM_13560 IPR017871 ABC transporter, conserved site VM_13560 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_13565 IPR007016 O-antigen ligase-related VM_13565 IPR021797 Protein of unknown function DUF3366 VM_13565 IPR031726 VM_13565 VM_13570 IPR000192 Aminotransferase class V domain VM_13570 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VM_13570 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VM_13570 IPR015424 Pyridoxal phosphate-dependent transferase VM_13570 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site VM_13570 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase VM_13575 IPR001048 Aspartate/glutamate/uridylate kinase VM_13575 IPR001341 Aspartate kinase domain VM_13575 IPR005260 Aspartate kinase, monofunctional class VM_13575 IPR018042 Aspartate kinase, conserved site VM_13575 IPR036393 VM_13575 VM_13580 IPR000489 Pterin-binding VM_13580 IPR003726 Homocysteine S-methyltransferase VM_13580 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain VM_13580 IPR004223 Vitamin B12-dependent methionine synthase, activation domain VM_13580 IPR006158 Cobalamin (vitamin B12)-binding domain VM_13580 IPR011005 Dihydropteroate synthase-like VM_13580 IPR011822 Cobalamin-dependent methionine synthase VM_13580 IPR036589 VM_13580 VM_13580 IPR036594 VM_13580 VM_13580 IPR036724 VM_13580 VM_13580 IPR037010 VM_13580 VM_13585 IPR006153 Cation/H+ exchanger VM_13655 IPR002500 Phosphoadenosine phosphosulphate reductase VM_13655 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase VM_13655 IPR011800 Phosphoadenosine phosphosulphate reductase CysH VM_13655 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_13660 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain VM_13660 IPR006066 Nitrite/sulphite reductase iron-sulphur/siroheam-binding site VM_13660 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain VM_13660 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit VM_13660 IPR036136 VM_13660 VM_13665 IPR001094 Flavodoxin VM_13665 IPR001433 Oxidoreductase FAD/NAD(P)-binding VM_13665 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase VM_13665 IPR003097 FAD-binding, type 1 VM_13665 IPR008254 Flavodoxin/nitric oxide synthase VM_13665 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain VM_13665 IPR017938 Riboflavin synthase-like beta-barrel VM_13665 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 VM_13665 IPR029039 Flavoprotein-like VM_13665 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria VM_13665 IPR039261 VM_13665 VM_13680 IPR026387 Outer membrane protein VM_13680 IPR027385 Outer membrane protein beta-barrel VM_13685 IPR014318 Phage shock protein, PspG VM_13690 IPR001269 tRNA-dihydrouridine synthase VM_13690 IPR004653 tRNA-dihydrouridine synthase, TIM-barrel, YjbN VM_13690 IPR013785 Aldolase-type TIM barrel VM_13690 IPR018517 tRNA-dihydrouridine synthase, conserved site VM_13695 IPR002481 Ferric-uptake regulator VM_13695 IPR036388 VM_13695 VM_13695 IPR036390 VM_13695 VM_13700 IPR028051 Chemotaxis phosphatase CheX-like domain VM_13700 IPR028976 CheC-like domain VM_13705 IPR001672 Phosphoglucose isomerase (PGI) VM_13705 IPR018189 Phosphoglucose isomerase, conserved site VM_13705 IPR023096 Phosphoglucose isomerase, C-terminal VM_13710 IPR001602 Uncharacterised protein family UPF0047 VM_13710 IPR035917 VM_13710 VM_13715 IPR000821 Alanine racemase VM_13715 IPR001608 Alanine racemase, N-terminal VM_13715 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal VM_13715 IPR011079 Alanine racemase, C-terminal VM_13715 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site VM_13715 IPR029066 PLP-binding barrel VM_13720 IPR007692 DNA helicase, DnaB type VM_13720 IPR007693 DNA helicase, DnaB-like, N-terminal VM_13720 IPR007694 DNA helicase, DnaB-like, C-terminal VM_13720 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal VM_13720 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_13720 IPR036185 VM_13720 VM_13725 IPR007433 Protein of unknown function DUF481 VM_13730 IPR009027 Ribosomal protein L9/RNase H1, N-terminal VM_13730 IPR020069 Ribosomal protein L9, C-terminal VM_13730 IPR020070 Ribosomal protein L9, N-terminal VM_13730 IPR020594 Ribosomal protein L9, bacteria/chloroplast VM_13730 IPR036791 VM_13730 VM_13730 IPR036935 VM_13730 VM_13735 IPR001648 Ribosomal protein S18 VM_13735 IPR018275 Ribosomal protein S18, conserved site VM_13735 IPR036870 VM_13735 VM_13740 IPR000424 Primosome PriB/single-strand DNA-binding VM_13740 IPR012340 Nucleic acid-binding, OB-fold VM_13740 IPR023646 Primosomal replication protein PriB VM_13745 IPR000529 Ribosomal protein S6 VM_13745 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 VM_13745 IPR020814 Ribosomal protein S6, plastid/chloroplast VM_13745 IPR020815 Ribosomal protein S6, conserved site VM_13745 IPR035980 VM_13745 VM_13750 IPR002024 Bacterioferritin VM_13750 IPR008331 Ferritin/DPS protein domain VM_13750 IPR009078 Ferritin-like superfamily VM_13750 IPR012347 Ferritin-related VM_13755 IPR007419 BFD-like [2Fe-2S]-binding domain VM_13760 IPR000795 Elongation factor, GTP-binding domain VM_13760 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal VM_13760 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 VM_13760 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle VM_13760 IPR005225 Small GTP-binding protein domain VM_13760 IPR009000 Translation protein, beta-barrel domain VM_13760 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VM_13760 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_13760 IPR031157 VM_13760 VM_13765 IPR000640 Translation elongation factor EFG, V domain VM_13765 IPR000795 Elongation factor, GTP-binding domain VM_13765 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 VM_13765 IPR004540 Translation elongation factor EFG/EF2 VM_13765 IPR005225 Small GTP-binding protein domain VM_13765 IPR005517 Translation elongation factor EFG/EF2, domain IV VM_13765 IPR009000 Translation protein, beta-barrel domain VM_13765 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VM_13765 IPR020568 Ribosomal protein S5 domain 2-type fold VM_13765 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_13765 IPR031157 VM_13765 VM_13765 IPR035647 VM_13765 VM_13770 IPR000235 Ribosomal protein S5/S7 VM_13770 IPR005717 Ribosomal protein S7, bacterial/organellar-type VM_13770 IPR020606 Ribosomal protein S7, conserved site VM_13770 IPR023798 Ribosomal protein S7 domain VM_13770 IPR036823 VM_13770 VM_13775 IPR005679 Ribosomal protein S12, bacteria VM_13775 IPR006032 Ribosomal protein S12/S23 VM_13775 IPR012340 Nucleic acid-binding, OB-fold VM_13780 IPR007215 Sulphur relay, TusB/DsrH VM_13780 IPR027396 DsrEFH-like VM_13785 IPR003787 Sulphur relay, DsrE/F-like protein VM_13785 IPR017462 Sulphur relay, TusC/DsrF VM_13785 IPR027396 DsrEFH-like VM_13790 IPR003787 Sulphur relay, DsrE/F-like protein VM_13790 IPR017463 Sulphur relay, TusD/DsrE VM_13790 IPR027396 DsrEFH-like VM_13795 IPR013559 YheO-like VM_13795 IPR039445 VM_13795 VM_13800 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal VM_13800 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain VM_13800 IPR036944 VM_13800 VM_13805 IPR001680 WD40 repeat VM_13805 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily VM_13805 IPR015943 WD40/YVTN repeat-like-containing domain VM_13805 IPR019775 WD40 repeat, conserved site VM_13810 IPR007236 SlyX VM_13815 IPR019201 Protein of unknown function DUF2065 VM_13820 IPR001107 Band 7 protein VM_13820 IPR010200 HflC VM_13820 IPR036013 VM_13820 VM_13825 IPR001107 Band 7 protein VM_13825 IPR001972 Stomatin family VM_13825 IPR010201 HflK VM_13825 IPR020980 Menbrane protein HflK, N-terminal VM_13825 IPR036013 VM_13825 VM_13830 IPR006073 GTP binding domain VM_13830 IPR016496 GTPase HflX VM_13830 IPR025121 GTPase HflX N-terminal domain VM_13830 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_13830 IPR032305 VM_13830 VM_13830 IPR035647 VM_13830 VM_13835 IPR005001 Host factor Hfq VM_13835 IPR010920 Like-Sm (LSM) domain VM_13840 IPR018022 tRNA delta(2)-isopentenylpyrophosphate transferase VM_13840 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_13845 IPR002099 DNA mismatch repair protein family VM_13845 IPR013507 DNA mismatch repair protein, C-terminal VM_13845 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VM_13845 IPR014762 DNA mismatch repair, conserved site VM_13845 IPR014790 MutL, C-terminal, dimerisation VM_13845 IPR020568 Ribosomal protein S5 domain 2-type fold VM_13845 IPR020667 DNA mismatch repair protein, MutL VM_13845 IPR036890 VM_13845 VM_13845 IPR037198 VM_13845 VM_13850 IPR002508 Cell wall hydrolase/autolysin, catalytic VM_13850 IPR018392 LysM domain VM_13850 IPR021731 AMIN domain VM_13850 IPR036779 VM_13850 VM_13855 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE VM_13855 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_13860 IPR004453 Epoxyqueuosine reductase QueG VM_13860 IPR013542 Domain of unknown function DUF1730 VM_13860 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VM_13910 IPR012337 Ribonuclease H-like domain VM_13910 IPR013520 Exonuclease, RNase T/DNA polymerase III VM_13910 IPR022894 Oligoribonuclease VM_13910 IPR036397 VM_13910 VM_13915 IPR004881 Ribosome biogenesis GTPase RsgA, putative VM_13915 IPR010914 EngC GTPase VM_13915 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_13920 IPR003817 Phosphatidylserine decarboxylase-related VM_13920 IPR033177 VM_13920 VM_13920 IPR033178 VM_13920 VM_13925 IPR001898 Sodium/sulphate symporter VM_13930 IPR000620 Drug/metabolite transporter VM_13935 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent VM_13935 IPR006124 Metalloenzyme VM_13935 IPR011258 BPG-independent PGAM, N-terminal VM_13935 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha VM_13935 IPR017850 Alkaline-phosphatase-like, core domain VM_13935 IPR036646 VM_13935 VM_13940 IPR011055 Duplicated hybrid motif VM_13940 IPR016047 Peptidase M23 VM_13945 IPR038763 VM_13945 VM_13950 IPR001647 DNA-binding HTH domain, TetR-type VM_13950 IPR009057 Homeodomain-like VM_13950 IPR025722 Bacterial transcriptional repressor TetR VM_13955 IPR000257 Uroporphyrinogen decarboxylase (URO-D) VM_13955 IPR006361 Uroporphyrinogen decarboxylase HemE VM_13955 IPR038071 VM_13955 VM_13960 IPR000086 NUDIX hydrolase domain VM_13960 IPR015376 Zinc ribbon, NADH pyrophosphatase VM_13960 IPR015797 NUDIX hydrolase domain-like VM_13960 IPR020084 NUDIX hydrolase, conserved site VM_13960 IPR020476 NUDIX hydrolase VM_13960 IPR022925 NADH pyrophosphatase NudC VM_13965 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ VM_13965 IPR038309 VM_13965 VM_13970 IPR000722 RNA polymerase, alpha subunit VM_13970 IPR006592 RNA polymerase, N-terminal VM_13970 IPR007066 RNA polymerase Rpb1, domain 3 VM_13970 IPR007080 RNA polymerase Rpb1, domain 1 VM_13970 IPR007081 RNA polymerase Rpb1, domain 5 VM_13970 IPR007083 RNA polymerase Rpb1, domain 4 VM_13970 IPR012754 DNA-directed RNA polymerase, subunit beta-prime VM_13970 IPR038120 VM_13970 VM_13975 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 VM_13975 IPR007121 RNA polymerase, beta subunit, conserved site VM_13975 IPR007641 RNA polymerase Rpb2, domain 7 VM_13975 IPR007642 RNA polymerase Rpb2, domain 2 VM_13975 IPR007644 RNA polymerase, beta subunit, protrusion VM_13975 IPR007645 RNA polymerase Rpb2, domain 3 VM_13975 IPR010243 DNA-directed RNA polymerase, beta subunit VM_13975 IPR014724 RNA polymerase Rpb2, OB-fold VM_13975 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain VM_13975 IPR037033 VM_13975 VM_13975 IPR037034 VM_13975 VM_13980 IPR000206 Ribosomal protein L7/L12 VM_13980 IPR008932 Ribosomal protein L7/L12, oligomerisation VM_13980 IPR013823 Ribosomal protein L7/L12, C-terminal VM_13980 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VM_13980 IPR036235 VM_13980 VM_13985 IPR001790 Ribosomal protein L10/acidic P0 VM_13985 IPR002363 Ribosomal protein L10, eubacterial, conserved site VM_13985 IPR022973 Ribosomal protein L10 VM_13990 IPR002143 Ribosomal protein L1 VM_13990 IPR005878 Ribosomal protein L1, bacterial-type VM_13990 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich VM_13990 IPR023673 Ribosomal protein L1, conserved site VM_13990 IPR023674 Ribosomal protein L1-like VM_13990 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein VM_13995 IPR000911 Ribosomal protein L11/L12 VM_13995 IPR006519 Ribosomal protein L11, bacterial-type VM_13995 IPR020783 Ribosomal protein L11, C-terminal VM_13995 IPR020784 Ribosomal protein L11, N-terminal VM_13995 IPR020785 Ribosomal protein L11, conserved site VM_13995 IPR036769 VM_13995 VM_13995 IPR036796 VM_13995 VM_14000 IPR001062 Transcription antitermination protein, NusG VM_14000 IPR005824 KOW VM_14000 IPR006645 NusG, N-terminal VM_14000 IPR008991 Translation protein SH3-like domain VM_14000 IPR014722 Ribosomal protein L2 domain 2 VM_14000 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site VM_14000 IPR036735 VM_14000 VM_14005 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit VM_14005 IPR005807 SecE subunit of protein translocation complex VM_14005 IPR038379 VM_14005 VM_14010 IPR000795 Elongation factor, GTP-binding domain VM_14010 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal VM_14010 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 VM_14010 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle VM_14010 IPR005225 Small GTP-binding protein domain VM_14010 IPR009000 Translation protein, beta-barrel domain VM_14010 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VM_14010 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_14010 IPR031157 VM_14010 VM_14035 IPR004566 Bacterial pantothenate kinase VM_14035 IPR006083 Phosphoribulokinase/uridine kinase VM_14035 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_14040 IPR003142 Biotin protein ligase, C-terminal VM_14040 IPR004143 Biotin/lipoate A/B protein ligase VM_14040 IPR004408 Biotin--acetyl-CoA-carboxylase ligase VM_14040 IPR004409 Biotin operon repressor, helix-turn-helix domain VM_14040 IPR008988 Transcriptional repressor, C-terminal VM_14040 IPR013196 Helix-turn-helix, type 11 VM_14040 IPR030855 VM_14040 VM_14040 IPR036388 VM_14040 VM_14040 IPR036390 VM_14040 VM_14045 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase VM_14045 IPR006094 FAD linked oxidase, N-terminal VM_14045 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal VM_14045 IPR016167 FAD-binding, type 2, subdomain 1 VM_14045 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 VM_14045 IPR036318 VM_14045 VM_14045 IPR036635 VM_14045 VM_14050 IPR000182 GNAT domain VM_14050 IPR016181 Acyl-CoA N-acyltransferase VM_14060 IPR001736 Phospholipase D/Transphosphatidylase VM_14060 IPR025202 Phospholipase D-like domain VM_14090 IPR001221 Phenol hydroxylase reductase VM_14090 IPR001433 Oxidoreductase FAD/NAD(P)-binding VM_14090 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase VM_14090 IPR008333 Oxidoreductase, FAD-binding domain VM_14090 IPR017938 Riboflavin synthase-like beta-barrel VM_14090 IPR039261 VM_14090 VM_14095 IPR001041 2Fe-2S ferredoxin-type domain VM_14095 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site VM_14095 IPR012675 Beta-grasp domain VM_14095 IPR036010 VM_14095 VM_14100 IPR002830 UbiD decarboxylyase family VM_14110 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain VM_14110 IPR003593 AAA+ ATPase domain VM_14110 IPR004665 Transcription termination factor Rho VM_14110 IPR011112 Rho termination factor, N-terminal VM_14110 IPR011113 Rho termination factor, RNA-binding VM_14110 IPR011129 Cold shock protein VM_14110 IPR012340 Nucleic acid-binding, OB-fold VM_14110 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_14110 IPR036269 VM_14110 VM_14115 IPR005746 Thioredoxin VM_14115 IPR013766 Thioredoxin domain VM_14115 IPR017937 Thioredoxin, conserved site VM_14115 IPR036249 VM_14115 VM_14120 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site VM_14120 IPR001650 Helicase, C-terminal VM_14120 IPR011545 DEAD/DEAH box helicase domain VM_14120 IPR014001 Helicase, superfamily 1/2, ATP-binding domain VM_14120 IPR023554 RNA helicase, ATP-dependent, RhlB-type VM_14120 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_14125 IPR003695 Ppx/GppA phosphatase VM_14125 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase VM_14125 IPR030673 VM_14125 VM_14130 IPR001789 Signal transduction response regulator, receiver domain VM_14130 IPR003594 Histidine kinase-like ATPase, C-terminal domain VM_14130 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain VM_14130 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_14130 IPR011006 CheY-like superfamily VM_14130 IPR035965 VM_14130 VM_14130 IPR036097 VM_14130 VM_14130 IPR036890 VM_14130 VM_14130 IPR038377 VM_14130 VM_14135 IPR024989 Major facilitator superfamily associated domain VM_14135 IPR026032 Phenylproprionate/maltose permease VM_14135 IPR036259 VM_14135 VM_14145 IPR000595 Cyclic nucleotide-binding domain VM_14145 IPR000644 CBS domain VM_14145 IPR005105 Protein-PII uridylyltransferase, N-terminal VM_14145 IPR014710 RmlC-like jelly roll fold VM_14145 IPR018490 Cyclic nucleotide-binding-like VM_14145 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding VM_14150 IPR012337 Ribonuclease H-like domain VM_14150 IPR013520 Exonuclease, RNase T/DNA polymerase III VM_14150 IPR036397 VM_14150 VM_14155 IPR000873 AMP-dependent synthetase/ligase VM_14155 IPR011904 Acetate-CoA ligase VM_14155 IPR020845 AMP-binding, conserved site VM_14155 IPR025110 AMP-binding enzyme C-terminal domain VM_14155 IPR032387 VM_14155 VM_14160 IPR001874 Dehydroquinase, class II VM_14160 IPR018509 Dehydroquinase, class II, conserved site VM_14160 IPR036441 VM_14160 VM_14165 IPR000089 Biotin/lipoyl attachment VM_14165 IPR001249 Acetyl-CoA biotin carboxyl carrier VM_14165 IPR001882 Biotin-binding site VM_14165 IPR011053 Single hybrid motif VM_14170 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase VM_14170 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain VM_14170 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal VM_14170 IPR005482 Biotin carboxylase, C-terminal VM_14170 IPR011054 Rudiment single hybrid motif VM_14170 IPR013815 ATP-grasp fold, subdomain 1 VM_14170 IPR016185 Pre-ATP-grasp domain VM_14175 IPR004498 Ribosomal protein L11 methyltransferase VM_14175 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VM_14180 IPR001269 tRNA-dihydrouridine synthase VM_14180 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 VM_14180 IPR013785 Aldolase-type TIM barrel VM_14180 IPR018517 tRNA-dihydrouridine synthase, conserved site VM_14180 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal VM_14180 IPR032887 VM_14180 VM_14185 IPR002197 DNA binding HTH domain, Fis-type VM_14185 IPR005412 DNA-binding protein Fis VM_14185 IPR009057 Homeodomain-like VM_14190 IPR000843 Transcription regulator HTH, LacI VM_14190 IPR001761 Periplasmic binding protein/LacI sugar binding domain VM_14190 IPR010982 Lambda repressor-like, DNA-binding domain VM_14190 IPR028082 Periplasmic binding protein-like I VM_14195 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase VM_14195 IPR004786 6-phosphogluconate dehydratase VM_14195 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site VM_14195 IPR037237 VM_14195 VM_14200 IPR006001 Carbohydrate kinase, thermoresistant glucokinase VM_14200 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_14200 IPR031322 VM_14200 VM_14205 IPR003474 Gluconate transporter VM_14210 IPR000887 KDPG/KHG aldolase VM_14210 IPR013785 Aldolase-type TIM barrel VM_14210 IPR031337 VM_14210 VM_14210 IPR031338 VM_14210 VM_14215 IPR000531 TonB-dependent receptor, beta-barrel VM_14215 IPR010105 TonB-dependent siderophore receptor VM_14215 IPR010917 TonB-dependent receptor, conserved site VM_14215 IPR012910 TonB-dependent receptor, plug VM_14215 IPR036942 VM_14215 VM_14215 IPR037066 VM_14215 VM_14220 IPR032307 VM_14220 VM_14225 IPR003660 HAMP linker domain VM_14225 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_14225 IPR004090 Chemotaxis methyl-accepting receptor VM_14225 IPR033480 VM_14225 VM_14230 IPR000310 Orn/Lys/Arg decarboxylase, major domain VM_14230 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal VM_14230 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal VM_14230 IPR011193 Ornithine/lysine/arginine decarboxylase VM_14230 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VM_14230 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VM_14230 IPR015424 Pyridoxal phosphate-dependent transferase VM_14230 IPR036633 VM_14230 VM_14235 IPR002293 Amino acid/polyamine transporter I VM_14240 IPR001867 Signal transduction response regulator, C-terminal VM_14240 IPR011990 Tetratricopeptide-like helical domain VM_14240 IPR016032 Signal transduction response regulator, C-terminal effector VM_14240 IPR036388 VM_14240 VM_14245 IPR000551 MerR-type HTH domain VM_14245 IPR009061 DNA binding domain, putative VM_14245 IPR011788 Zn(II)-responsive transcriptional regulator VM_14245 IPR015358 Transcription regulator MerR, DNA binding VM_14250 IPR002695 AICARFT/IMPCHase bienzyme VM_14250 IPR011607 Methylglyoxal synthase-like domain VM_14250 IPR016193 Cytidine deaminase-like VM_14250 IPR024051 AICAR transformylase domain VM_14250 IPR036914 VM_14250 VM_14255 IPR000115 Phosphoribosylglycinamide synthetase VM_14255 IPR011054 Rudiment single hybrid motif VM_14255 IPR013815 ATP-grasp fold, subdomain 1 VM_14255 IPR016185 Pre-ATP-grasp domain VM_14255 IPR020559 Phosphoribosylglycinamide synthetase, conserved site VM_14255 IPR020560 Phosphoribosylglycinamide synthetase, C-domain VM_14255 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain VM_14255 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal VM_14255 IPR037123 VM_14255 VM_14260 IPR010858 Protein of unknown function DUF1481 VM_14260 IPR016872 Uncharacterised conserved protein UCP028160 VM_14265 IPR000119 Histone-like bacterial DNA-binding protein VM_14265 IPR010992 Integration host factor (IHF)-like DNA-binding domain VM_14265 IPR020816 Histone-like DNA-binding protein, conserved site VM_14270 IPR000644 CBS domain VM_14270 IPR002550 Domain of unknown function DUF21 VM_14275 IPR007338 Protein of unknown function DUF416 VM_14275 IPR023381 YP001051499.1-like domain VM_14280 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain VM_14280 IPR036291 VM_14280 VM_14285 IPR005122 Uracil-DNA glycosylase-like VM_14285 IPR036895 VM_14285 VM_14290 IPR006685 Mechanosensitive ion channel MscS VM_14290 IPR010920 Like-Sm (LSM) domain VM_14290 IPR011066 Mechanosensitive ion channel MscS, C-terminal VM_14295 IPR001279 Beta-lactamase-like VM_14295 IPR011108 RNA-metabolising metallo-beta-lactamase VM_14295 IPR022712 Beta-Casp domain VM_14295 IPR036866 VM_14295 VM_14300 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain VM_14300 IPR036291 VM_14300 VM_14305 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase VM_14305 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VM_14305 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VM_14305 IPR015424 Pyridoxal phosphate-dependent transferase VM_14310 IPR001451 Bacterial transferase hexapeptide repeat VM_14310 IPR011004 Trimeric LpxA-like VM_14310 IPR020019 Sialic acid O-acyltransferase, NeuD VM_14315 IPR003362 Bacterial sugar transferase VM_14325 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_14325 IPR029055 Nucleophile aminohydrolases, N-terminal VM_14330 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain VM_14350 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase VM_14350 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VM_14350 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VM_14350 IPR015424 Pyridoxal phosphate-dependent transferase VM_14355 IPR001451 Bacterial transferase hexapeptide repeat VM_14355 IPR011004 Trimeric LpxA-like VM_14360 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal VM_14360 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like VM_14360 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation VM_14360 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal VM_14360 IPR017476 UDP-glucose/GDP-mannose dehydrogenase VM_14360 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase VM_14360 IPR036220 VM_14360 VM_14360 IPR036291 VM_14360 VM_14365 IPR000683 Oxidoreductase, N-terminal VM_14365 IPR004104 Oxidoreductase, C-terminal VM_14365 IPR036291 VM_14365 VM_14370 IPR003856 Lipopolysaccharide biosynthesis VM_14375 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain VM_14375 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase VM_14375 IPR036291 VM_14375 VM_14380 IPR002509 Polysaccharide deacetylase VM_14380 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel VM_14380 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain VM_14385 IPR001451 Bacterial transferase hexapeptide repeat VM_14385 IPR011004 Trimeric LpxA-like VM_14385 IPR018357 Hexapeptide transferase, conserved site VM_14390 IPR007016 O-antigen ligase-related VM_14395 IPR002201 Glycosyl transferase, family 9 VM_14395 IPR011910 Lipopolysaccharide heptosyltransferase II VM_14400 IPR002201 Glycosyl transferase, family 9 VM_14405 IPR007577 Glycosyltransferase, DXD sugar-binding motif VM_14405 IPR029044 Nucleotide-diphospho-sugar transferases VM_14410 IPR001296 Glycosyl transferase, family 1 VM_14410 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal VM_14410 IPR038107 VM_14410 VM_14415 IPR010033 HAD-superfamily phosphatase, subfamily IIIC VM_14415 IPR010039 Capsule biosynthesis phosphatase VM_14415 IPR023214 HAD-like domain VM_14415 IPR036412 VM_14415 VM_14420 IPR011009 Protein kinase-like domain VM_14420 IPR029044 Nucleotide-diphospho-sugar transferases VM_14425 IPR016873 Capsular polysaccharide biosynthesis protein, BcbE, predicted VM_14425 IPR029044 Nucleotide-diphospho-sugar transferases VM_14430 IPR011122 WavE lipopolysaccharide synthesis VM_14435 IPR011009 Protein kinase-like domain VM_14435 IPR022826 3-deoxy-D-manno-octulosonic acid kinase VM_14440 IPR002201 Glycosyl transferase, family 9 VM_14445 IPR001173 Glycosyltransferase 2-like VM_14445 IPR029044 Nucleotide-diphospho-sugar transferases VM_14450 IPR002201 Glycosyl transferase, family 9 VM_14455 IPR001980 Coenzyme A biosynthesis protein VM_14455 IPR004821 Cytidyltransferase-like domain VM_14455 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_14460 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase VM_14460 IPR010979 Ribosomal protein S13-like, H2TH VM_14460 IPR012319 DNA glycosylase/AP lyase, catalytic domain VM_14460 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding VM_14460 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site VM_14460 IPR020629 Formamidopyrimidine-DNA glycosylase VM_14460 IPR035937 VM_14460 VM_14470 IPR001705 Ribosomal protein L33 VM_14470 IPR011332 Zinc-binding ribosomal protein VM_14470 IPR018264 Ribosomal protein L33, conserved site VM_14470 IPR038584 VM_14470 VM_14475 IPR001383 Ribosomal protein L28 VM_14475 IPR026569 Ribosomal protein L28/L24 VM_14475 IPR034704 VM_14475 VM_14475 IPR037147 VM_14475 VM_14480 IPR001405 RadC protein VM_14480 IPR010994 RuvA domain 2-like VM_14480 IPR020891 Uncharacterised protein family UPF0758, conserved site VM_14480 IPR025657 RadC-like JAB domain VM_14485 IPR003660 HAMP linker domain VM_14485 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_14485 IPR004090 Chemotaxis methyl-accepting receptor VM_14485 IPR033480 VM_14485 VM_14490 IPR003382 Flavoprotein VM_14490 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC VM_14490 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal VM_14490 IPR035929 VM_14490 VM_14490 IPR036551 VM_14490 VM_14495 IPR001647 DNA-binding HTH domain, TetR-type VM_14495 IPR009057 Homeodomain-like VM_14495 IPR023769 Nucleoid occlusion factor SlmA VM_14495 IPR036271 VM_14495 VM_14500 IPR004960 Bacterial lipid A biosynthesis acyltransferase VM_14500 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase VM_14505 IPR004960 Bacterial lipid A biosynthesis acyltransferase VM_14505 IPR011921 Lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase VM_14510 IPR000836 Phosphoribosyltransferase domain VM_14510 IPR004467 Orotate phosphoribosyl transferase domain VM_14510 IPR023031 Orotate phosphoribosyltransferase VM_14510 IPR029057 Phosphoribosyltransferase-like VM_14515 IPR001247 Exoribonuclease, phosphorolytic domain 1 VM_14515 IPR002381 Ribonuclease phosphorolytic, bacterial-type VM_14515 IPR015847 Exoribonuclease, phosphorolytic domain 2 VM_14515 IPR018336 Ribonuclease PH, conserved site VM_14515 IPR020568 Ribosomal protein S5 domain 2-type fold VM_14515 IPR027408 PNPase/RNase PH domain VM_14515 IPR036345 VM_14515 VM_14520 IPR005229 Conserved hypothetical protein CHP00255 VM_14520 IPR013527 YicC-like, N-terminal VM_14520 IPR013551 Domain of unknown function DUF1732 VM_14525 IPR005134 Uncharacterised protein family UPF0114 VM_14525 IPR020761 Uncharacterised protein family UPF0114, bacteria VM_14530 IPR003352 Phosphotransferase system, EIIC VM_14530 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site VM_14530 IPR036878 VM_14530 VM_14535 IPR001347 Sugar isomerase (SIS) VM_14535 IPR005486 Glucokinase regulatory protein, conserved site VM_14535 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ VM_14545 IPR000281 Helix-turn-helix protein RpiR VM_14545 IPR001347 Sugar isomerase (SIS) VM_14545 IPR009057 Homeodomain-like VM_14545 IPR036388 VM_14545 VM_14550 IPR000522 ABC transporter, permease protein VM_14550 IPR037294 VM_14550 VM_14555 IPR002491 ABC transporter periplasmic binding domain VM_14560 IPR003439 ABC transporter-like VM_14560 IPR003593 AAA+ ATPase domain VM_14560 IPR017871 ABC transporter, conserved site VM_14560 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_14565 IPR000531 TonB-dependent receptor, beta-barrel VM_14565 IPR010105 TonB-dependent siderophore receptor VM_14565 IPR010916 TonB box, conserved site VM_14565 IPR012910 TonB-dependent receptor, plug VM_14565 IPR036942 VM_14565 VM_14565 IPR037066 VM_14565 VM_14570 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain VM_14570 IPR012349 FMN-binding split barrel VM_14570 IPR024029 Pyridoxamine 5-phosphate oxidase, FMN-dependent VM_14575 IPR022080 Protein of unknown function DUF3630 VM_14580 IPR001650 Helicase, C-terminal VM_14580 IPR002121 HRDC domain VM_14580 IPR004589 DNA helicase, ATP-dependent, RecQ type VM_14580 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial VM_14580 IPR010997 HRDC-like VM_14580 IPR011545 DEAD/DEAH box helicase domain VM_14580 IPR014001 Helicase, superfamily 1/2, ATP-binding domain VM_14580 IPR018982 RQC domain VM_14580 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_14580 IPR032284 VM_14580 VM_14580 IPR036388 VM_14580 VM_14585 IPR000620 Drug/metabolite transporter VM_14585 IPR004626 RarD protein VM_14590 IPR000101 Gamma-glutamyltranspeptidase VM_14590 IPR029055 Nucleophile aminohydrolases, N-terminal VM_14595 IPR003313 AraC-type arabinose-binding/dimerisation domain VM_14595 IPR009057 Homeodomain-like VM_14595 IPR014710 RmlC-like jelly roll fold VM_14595 IPR018060 DNA binding HTH domain, AraC-type VM_14595 IPR037923 VM_14595 VM_14600 IPR001123 Lysine-type exporter protein (LYSE/YGGA) VM_14610 IPR005753 DNA helicase, ATP-dependent, UvrD type VM_14610 IPR013986 DExx box DNA helicase domain VM_14610 IPR014017 DNA helicase, UvrD-like, C-terminal VM_14610 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_14610 IPR034739 VM_14610 VM_14615 IPR001567 Peptidase M3A/M3B VM_14615 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 VM_14620 IPR007473 Ribosomal RNA large subunit methyltransferase J VM_14620 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VM_14625 IPR001100 VM_14625 VM_14625 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VM_14625 IPR006322 Glutathione reductase, eukaryote/bacterial VM_14625 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site VM_14625 IPR016156 FAD/NAD-linked reductase, dimerisation domain VM_14625 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain VM_14625 IPR036188 VM_14625 VM_14630 IPR036680 VM_14630 VM_14635 IPR000515 MetI-like domain VM_14635 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VM_14635 IPR035906 VM_14635 VM_14640 IPR000515 MetI-like domain VM_14640 IPR035906 VM_14640 VM_14645 IPR000914 Bacterial extracellular solute-binding protein, family 5 VM_14645 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site VM_14645 IPR030678 VM_14645 VM_14650 IPR003439 ABC transporter-like VM_14650 IPR003593 AAA+ ATPase domain VM_14650 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal VM_14650 IPR017871 ABC transporter, conserved site VM_14650 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_14685 IPR002323 Cytochrome c, class IE VM_14685 IPR009056 Cytochrome c-like domain VM_14685 IPR036909 VM_14685 VM_14690 IPR005752 DNA helicase, ATP-dependent, RepA type VM_14690 IPR013986 DExx box DNA helicase domain VM_14690 IPR014017 DNA helicase, UvrD-like, C-terminal VM_14690 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_14690 IPR034739 VM_14690 VM_14695 IPR001647 DNA-binding HTH domain, TetR-type VM_14695 IPR009057 Homeodomain-like VM_14695 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VM_14700 IPR006143 RND efflux pump, membrane fusion protein VM_14700 IPR032317 VM_14700 VM_14705 IPR001036 Acriflavin resistance protein VM_14705 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VM_14710 IPR007475 Membrane fusogenic activity VM_14715 IPR000506 Acetohydroxy acid isomeroreductase C-terminal VM_14715 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like VM_14715 IPR013023 Acetohydroxy acid isomeroreductase VM_14715 IPR013116 Acetohydroxy acid isomeroreductase, catalytic VM_14715 IPR013328 Dehydrogenase, multihelical VM_14715 IPR036291 VM_14715 VM_14720 IPR000847 Transcription regulator HTH, LysR VM_14720 IPR005119 LysR, substrate-binding VM_14720 IPR036388 VM_14720 VM_14720 IPR036390 VM_14720 VM_14790 IPR026816 Flavodoxin domain VM_14790 IPR029039 Flavoprotein-like VM_14795 IPR003445 Cation transporter VM_14795 IPR004772 Potassium uptake protein TrkH family VM_14800 IPR001498 Impact, N-terminal VM_14800 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal VM_14800 IPR015796 Impact family, bacterial/archaeal VM_14800 IPR020568 Ribosomal protein S5 domain 2-type fold VM_14800 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site VM_14800 IPR035647 VM_14800 VM_14800 IPR036956 VM_14800 VM_14805 IPR001753 Crotonase superfamily VM_14805 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal VM_14805 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding VM_14805 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site VM_14805 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like VM_14805 IPR012799 Fatty oxidation complex, alpha subunit FadB VM_14805 IPR029045 ClpP/crotonase-like domain VM_14805 IPR036291 VM_14805 VM_14810 IPR002155 Thiolase VM_14810 IPR012805 Acetyl-CoA C-acyltransferase FadA VM_14810 IPR016039 Thiolase-like VM_14810 IPR020610 Thiolase, active site VM_14810 IPR020613 Thiolase, conserved site VM_14810 IPR020615 Thiolase, acyl-enzyme intermediate active site VM_14810 IPR020616 Thiolase, N-terminal VM_14810 IPR020617 Thiolase, C-terminal VM_14815 IPR000847 Transcription regulator HTH, LysR VM_14815 IPR005119 LysR, substrate-binding VM_14815 IPR036388 VM_14815 VM_14815 IPR036390 VM_14815 VM_14820 IPR004812 Drug resistance transporter Bcr/CmlA subfamily VM_14820 IPR011701 Major facilitator superfamily VM_14820 IPR036259 VM_14820 VM_14825 IPR001451 Bacterial transferase hexapeptide repeat VM_14825 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase VM_14825 IPR011004 Trimeric LpxA-like VM_14825 IPR025877 MobA-like NTP transferase domain VM_14825 IPR029044 Nucleotide-diphospho-sugar transferases VM_14830 IPR001469 ATPase, F1 complex, delta/epsilon subunit VM_14830 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal VM_14830 IPR020547 ATPase, F1 complex, delta/epsilon subunit, C-terminal domain VM_14830 IPR036771 VM_14830 VM_14830 IPR036794 VM_14830 VM_14835 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain VM_14835 IPR003593 AAA+ ATPase domain VM_14835 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain VM_14835 IPR005722 ATPase, F1 complex, beta subunit VM_14835 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site VM_14835 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal VM_14835 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_14835 IPR036121 VM_14835 VM_14840 IPR000131 ATPase, F1 complex, gamma subunit VM_14840 IPR023632 ATPase, F1 complex, gamma subunit conserved site VM_14840 IPR035968 VM_14840 VM_14845 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain VM_14845 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal VM_14845 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain VM_14845 IPR005294 ATPase, F1 complex, alpha subunit VM_14845 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site VM_14845 IPR023366 ATP synthase subunit alpha-like domain VM_14845 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_14845 IPR036121 VM_14845 VM_14845 IPR038376 VM_14845 VM_14850 IPR000711 ATPase, OSCP/delta subunit VM_14850 IPR020781 ATPase, OSCP/delta subunit, conserved site VM_14850 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain VM_14855 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast VM_14855 IPR005864 ATPase, F0 complex, subunit B, bacterial VM_14855 IPR028987 F-type ATP synthase subunit B-like, membrane domain VM_14860 IPR000454 ATPase, F0 complex, subunit C VM_14860 IPR002379 V-ATPase proteolipid subunit C-like domain VM_14860 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast VM_14860 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site VM_14860 IPR035921 VM_14860 VM_14860 IPR038662 VM_14860 VM_14865 IPR000568 ATPase, F0 complex, subunit A VM_14865 IPR023011 ATPase, F0 complex, subunit A, active site VM_14865 IPR035908 VM_14865 VM_14870 IPR005598 ATP synthase protein I VM_14875 IPR003115 ParB/Sulfiredoxin VM_14875 IPR004437 ParB/RepB/Spo0J partition protein family VM_14875 IPR036086 VM_14875 VM_14880 IPR025669 AAA domain VM_14880 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_14885 IPR003682 rRNA small subunit methyltransferase G VM_14885 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VM_14890 IPR002218 Glucose-inhibited division protein A-related VM_14890 IPR004416 Glucose-inhibited division protein A VM_14890 IPR020595 Glucose-inhibited division protein A-related, conserved site VM_14890 IPR026904 GidA associated domain 3 VM_14890 IPR036188 VM_14890 VM_14895 IPR008254 Flavodoxin/nitric oxide synthase VM_14895 IPR029039 Flavoprotein-like VM_14900 IPR000847 Transcription regulator HTH, LysR VM_14900 IPR005119 LysR, substrate-binding VM_14900 IPR036388 VM_14900 VM_14900 IPR036390 VM_14900 VM_14905 IPR002818 ThiJ/PfpI VM_14905 IPR029062 Class I glutamine amidotransferase-like VM_14910 IPR010753 Protein of unknown function DUF1330 VM_14910 IPR011008 Dimeric alpha-beta barrel VM_14915 IPR010102 Succinate semialdehyde dehydrogenase VM_14915 IPR015590 Aldehyde dehydrogenase domain VM_14915 IPR016160 Aldehyde dehydrogenase, cysteine active site VM_14915 IPR016161 Aldehyde/histidinol dehydrogenase VM_14915 IPR016162 Aldehyde dehydrogenase, N-terminal VM_14915 IPR016163 Aldehyde dehydrogenase, C-terminal VM_14915 IPR029510 Aldehyde dehydrogenase, glutamic acid active site VM_14920 IPR025375 Domain of unknown function DUF4365 VM_14925 IPR006118 Recombinase, conserved site VM_14925 IPR006119 Resolvase, N-terminal VM_14925 IPR006120 Resolvase, HTH domain VM_14925 IPR009057 Homeodomain-like VM_14925 IPR036162 VM_14925 VM_14925 IPR036388 VM_14925 VM_14930 IPR002052 DNA methylase, N-6 adenine-specific, conserved site VM_14930 IPR011639 Restriction modification methylase Eco57I VM_14930 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VM_14935 IPR009528 Restriction endonuclease, type II, BsuBI/PstI, C-terminal VM_14940 IPR003959 ATPase, AAA-type, core VM_14940 IPR022602 Protein of unknown function DUF2813 VM_14940 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_14945 IPR014017 DNA helicase, UvrD-like, C-terminal VM_14945 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_14955 IPR010998 Integrase, Lambda-type, N-terminal VM_14955 IPR011010 DNA breaking-rejoining enzyme, catalytic core VM_14955 IPR024456 Integrase catalytic domain, putative VM_14995 IPR010927 Type IV conjugative transfer system protein TraH VM_15000 IPR012931 TraG-like, N-terminal VM_15020 IPR007944 Flagellar transcriptional activator FlhC VM_15025 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN VM_15030 IPR004322 Plasmid replicase, bacterial VM_15030 IPR014820 Primase, C-terminal 1 VM_15035 IPR009061 DNA binding domain, putative VM_15035 IPR010093 Excisionase/Xis, DNA-binding VM_15040 IPR002104 Integrase, catalytic VM_15040 IPR010998 Integrase, Lambda-type, N-terminal VM_15040 IPR011010 DNA breaking-rejoining enzyme, catalytic core VM_15040 IPR013762 Integrase-like, catalytic core VM_15040 IPR025269 Phage integrase SAM-like domain VM_15040 IPR035386 VM_15040 VM_15045 IPR004520 tRNA modification GTPase MnmE VM_15045 IPR005225 Small GTP-binding protein domain VM_15045 IPR006073 GTP binding domain VM_15045 IPR018948 GTP-binding protein TrmE, N-terminal VM_15045 IPR025867 tRNA modification GTPase MnmE C-terminal domain VM_15045 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 VM_15045 IPR027368 tRNA modification GTPase MnmE domain 2 VM_15045 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_15050 IPR001708 Membrane insertase OXA1/ALB3/YidC VM_15050 IPR019998 Membrane insertase YidC VM_15050 IPR028053 Membrane insertase YidC, N-terminal VM_15050 IPR028055 Membrane insertase YidC/Oxa1, C-terminal VM_15050 IPR038210 VM_15050 VM_15050 IPR038221 VM_15050 VM_15055 IPR002696 Putative membrane protein insertion efficiency factor VM_15060 IPR000100 Ribonuclease P VM_15060 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VM_15060 IPR020568 Ribosomal protein S5 domain 2-type fold VM_15065 IPR000271 Ribosomal protein L34 VM_15065 IPR020939 Ribosomal protein L34, conserved site VM_15070 IPR003439 ABC transporter-like VM_15070 IPR003593 AAA+ ATPase domain VM_15070 IPR017871 ABC transporter, conserved site VM_15070 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_15070 IPR030679 VM_15070 VM_15075 IPR000515 MetI-like domain VM_15075 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family VM_15075 IPR035906 VM_15075 VM_15080 IPR001320 Ionotropic glutamate receptor VM_15080 IPR001638 Extracellular solute-binding protein, family 3 VM_15080 IPR018313 Extracellular solute-binding protein, family 3, conserved site VM_15090 IPR000086 NUDIX hydrolase domain VM_15090 IPR015797 NUDIX hydrolase domain-like VM_15110 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VM_15115 IPR000182 GNAT domain VM_15115 IPR016181 Acyl-CoA N-acyltransferase VM_15120 IPR000182 GNAT domain VM_15120 IPR016181 Acyl-CoA N-acyltransferase VM_15125 IPR006959 Protein of unknown function DUF645 VM_15130 IPR000182 GNAT domain VM_15130 IPR016181 Acyl-CoA N-acyltransferase VM_15135 IPR000182 GNAT domain VM_15135 IPR016181 Acyl-CoA N-acyltransferase VM_15140 IPR000182 GNAT domain VM_15140 IPR016181 Acyl-CoA N-acyltransferase VM_15145 IPR000182 GNAT domain VM_15145 IPR016181 Acyl-CoA N-acyltransferase VM_15150 IPR010985 Ribbon-helix-helix VM_15150 IPR013321 Arc-type ribbon-helix-helix VM_15150 IPR014795 Vibrio phage ICP1, Orf50 VM_15155 IPR006959 Protein of unknown function DUF645 VM_15160 IPR021362 Protein of unknown function DUF2834 VM_15165 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VM_15165 IPR036069 VM_15165 VM_15170 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V VM_15170 IPR011057 Mss4-like VM_15190 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein VM_15190 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain VM_15195 IPR000182 GNAT domain VM_15195 IPR016181 Acyl-CoA N-acyltransferase VM_15200 IPR002712 Toxin CcdB VM_15200 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor VM_15205 IPR009956 Post-segregation antitoxin CcdA VM_15215 IPR000504 RNA recognition motif domain VM_15215 IPR012677 Nucleotide-binding, alpha-beta plait VM_15215 IPR035979 VM_15215 VM_15220 IPR000182 GNAT domain VM_15220 IPR016181 Acyl-CoA N-acyltransferase VM_15225 IPR002347 Glucose/ribitol dehydrogenase VM_15225 IPR036291 VM_15225 VM_15230 IPR036170 VM_15230 VM_15240 IPR007837 DNA damage-inducible protein DinB VM_15240 IPR034660 VM_15240 VM_15245 IPR002347 Glucose/ribitol dehydrogenase VM_15245 IPR036291 VM_15245 VM_15250 IPR039444 VM_15250 VM_15255 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family VM_15255 IPR028344 Toxin-antitoxin system, toxin component ParE1/4 VM_15255 IPR035093 VM_15255 VM_15260 IPR010985 Ribbon-helix-helix VM_15260 IPR022789 Uncharacterised protein family UPF0156/MetJ /Arc repressor VM_15260 IPR038296 VM_15260 VM_15265 IPR000182 GNAT domain VM_15265 IPR016181 Acyl-CoA N-acyltransferase VM_15270 IPR025375 Domain of unknown function DUF4365 VM_15275 IPR021856 Protein of unknown function DUF3465 VM_15280 IPR010710 Protein of unknown function DUF1289 VM_15285 IPR009585 Protein of unknown function DUF1196 VM_15300 IPR006959 Protein of unknown function DUF645 VM_15305 IPR007351 Uncharacterised protein YjbR VM_15305 IPR038056 VM_15305 VM_15315 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM VM_15315 IPR036165 VM_15315 VM_15320 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family VM_15320 IPR035093 VM_15320 VM_15325 IPR000182 GNAT domain VM_15325 IPR016181 Acyl-CoA N-acyltransferase VM_15335 IPR001452 SH3 domain VM_15335 IPR014593 Uncharacterised conserved protein UCP034961, SH3-2 VM_15335 IPR036028 VM_15335 VM_15345 IPR000182 GNAT domain VM_15345 IPR016181 Acyl-CoA N-acyltransferase VM_15355 IPR000566 Lipocalin/cytosolic fatty-acid binding domain VM_15355 IPR002446 Lipocalin, bacterial VM_15355 IPR012674 Calycin VM_15355 IPR022271 Lipocalin, ApoD type VM_15355 IPR022272 Lipocalin family conserved site VM_15365 IPR004481 Sodium/potassium/calcium exchanger VM_15365 IPR004837 Sodium/calcium exchanger membrane region VM_15370 IPR013078 Histidine phosphatase superfamily, clade-1 VM_15370 IPR029033 Histidine phosphatase superfamily VM_15375 IPR007396 Transcriptional regulator PAI 2-type VM_15375 IPR012349 FMN-binding split barrel VM_15380 IPR013094 Alpha/beta hydrolase fold-3 VM_15380 IPR029058 Alpha/Beta hydrolase fold VM_15385 IPR039444 VM_15385 VM_15400 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain VM_15400 IPR012349 FMN-binding split barrel VM_15415 IPR000182 GNAT domain VM_15415 IPR016181 Acyl-CoA N-acyltransferase VM_15425 IPR022178 Protein of unknown function DUF3709 VM_15430 IPR000182 GNAT domain VM_15430 IPR016181 Acyl-CoA N-acyltransferase VM_15440 IPR003719 Phenazine biosynthesis PhzF protein VM_15445 IPR008727 PAAR motif VM_15455 IPR000182 GNAT domain VM_15455 IPR016181 Acyl-CoA N-acyltransferase VM_15460 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VM_15460 IPR036069 VM_15460 VM_15465 IPR002712 Toxin CcdB VM_15465 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor VM_15470 IPR009956 Post-segregation antitoxin CcdA VM_15475 IPR000182 GNAT domain VM_15475 IPR016181 Acyl-CoA N-acyltransferase VM_15480 IPR011008 Dimeric alpha-beta barrel VM_15490 IPR007396 Transcriptional regulator PAI 2-type VM_15490 IPR012349 FMN-binding split barrel VM_15495 IPR004045 Glutathione S-transferase, N-terminal VM_15495 IPR004046 Glutathione S-transferase, C-terminal VM_15495 IPR036249 VM_15495 VM_15495 IPR036282 VM_15495 VM_15500 IPR001123 Lysine-type exporter protein (LYSE/YGGA) VM_15505 IPR000620 Drug/metabolite transporter VM_15510 IPR001544 Aminotransferase, class IV VM_15510 IPR036038 VM_15510 VM_15515 IPR000551 MerR-type HTH domain VM_15515 IPR009061 DNA binding domain, putative VM_15520 IPR000847 Transcription regulator HTH, LysR VM_15520 IPR005119 LysR, substrate-binding VM_15520 IPR036388 VM_15520 VM_15520 IPR036390 VM_15520 VM_15525 IPR011701 Major facilitator superfamily VM_15525 IPR036259 VM_15525 VM_15530 IPR001647 DNA-binding HTH domain, TetR-type VM_15530 IPR009057 Homeodomain-like VM_15530 IPR036271 VM_15530 VM_15535 IPR007065 HPP VM_15540 IPR003779 Carboxymuconolactone decarboxylase-like VM_15540 IPR004675 Alkylhydroperoxidase AhpD core VM_15540 IPR029032 AhpD-like VM_15545 IPR009057 Homeodomain-like VM_15545 IPR018060 DNA binding HTH domain, AraC-type VM_15550 IPR005669 Thiosulphate/Sulfate-binding protein VM_15550 IPR034408 VM_15550 VM_15555 IPR001537 tRNA/rRNA methyltransferase, SpoU type VM_15555 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VM_15555 IPR029028 Alpha/beta knot methyltransferases VM_15560 IPR011059 Metal-dependent hydrolase, composite domain VM_15560 IPR013108 Amidohydrolase 3 VM_15560 IPR032466 VM_15560 VM_15570 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VM_15570 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VM_15575 IPR000868 Isochorismatase-like VM_15575 IPR036380 VM_15575 VM_15585 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase VM_15585 IPR017850 Alkaline-phosphatase-like, core domain VM_15590 IPR009057 Homeodomain-like VM_15590 IPR018060 DNA binding HTH domain, AraC-type VM_15590 IPR018062 HTH domain AraC-type, conserved site VM_15590 IPR032783 VM_15590 VM_15590 IPR037923 VM_15590 VM_15595 IPR003779 Carboxymuconolactone decarboxylase-like VM_15595 IPR004675 Alkylhydroperoxidase AhpD core VM_15595 IPR029032 AhpD-like VM_15600 IPR005144 ATP-cone VM_15600 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic VM_15600 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VM_15605 IPR001989 Radical-activating enzyme, conserved site VM_15605 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic VM_15605 IPR013785 Aldolase-type TIM barrel VM_15610 IPR000796 Aspartate/other aminotransferase VM_15610 IPR004839 Aminotransferase, class I/classII VM_15610 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VM_15610 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VM_15610 IPR015424 Pyridoxal phosphate-dependent transferase VM_15615 IPR021109 Aspartic peptidase domain VM_15620 IPR001633 EAL domain VM_15620 IPR029016 GAF domain-like VM_15620 IPR029787 Nucleotide cyclase VM_15620 IPR035919 VM_15620 VM_15625 IPR003352 Phosphotransferase system, EIIC VM_15625 IPR003353 Phosphotransferase system, fructose-specific IIB subunit VM_15625 IPR003501 Phosphotransferase system, EIIB component, type 2/3 VM_15625 IPR006327 Phosphotransferase system, fructose IIC component VM_15625 IPR036095 VM_15625 VM_15630 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site VM_15630 IPR011611 Carbohydrate kinase PfkB VM_15630 IPR017583 Tagatose/fructose phosphokinase VM_15630 IPR022463 Fructose 1-phosphate kinase VM_15630 IPR029056 Ribokinase-like VM_15635 IPR000032 Phosphocarrier HPr protein-like VM_15635 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site VM_15635 IPR002114 Phosphotransferase system, HPr serine phosphorylation site VM_15635 IPR002178 PTS EIIA type-2 domain VM_15635 IPR016152 Phosphotransferase/anion transporter VM_15635 IPR035895 VM_15635 VM_15640 IPR000843 Transcription regulator HTH, LacI VM_15640 IPR001761 Periplasmic binding protein/LacI sugar binding domain VM_15640 IPR010982 Lambda repressor-like, DNA-binding domain VM_15640 IPR012781 D-fructose-responsive transcription factor VM_15640 IPR028082 Periplasmic binding protein-like I VM_15645 IPR004593 Nuclease SbcCD subunit D VM_15645 IPR004843 Calcineurin-like phosphoesterase domain, apaH type VM_15645 IPR026843 Nuclease SbcCD subunit D, C-terminal domain VM_15645 IPR029052 Metallo-dependent phosphatase-like VM_15650 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_15650 IPR038729 VM_15650 VM_15655 IPR001789 Signal transduction response regulator, receiver domain VM_15655 IPR003594 Histidine kinase-like ATPase, C-terminal domain VM_15655 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_15655 IPR011006 CheY-like superfamily VM_15655 IPR036097 VM_15655 VM_15655 IPR036890 VM_15655 VM_15660 IPR004839 Aminotransferase, class I/classII VM_15660 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VM_15660 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VM_15660 IPR015424 Pyridoxal phosphate-dependent transferase VM_15665 IPR004695 Voltage-dependent anion channel VM_15665 IPR038665 VM_15665 VM_15670 IPR001807 Chloride channel, voltage gated VM_15670 IPR014743 Chloride channel, core VM_15670 IPR023861 Chloride channel, ClcA VM_15675 IPR003495 CobW/HypB/UreG domain VM_15675 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal VM_15675 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_15680 IPR006073 GTP binding domain VM_15680 IPR016478 GTPase, MTG1 VM_15680 IPR019991 GTP-binding protein, ribosome biogenesis, YlqF VM_15680 IPR023179 GTP-binding protein, orthogonal bundle domain VM_15680 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_15685 IPR011040 Sialidases VM_15685 IPR013320 Concanavalin A-like lectin/glucanase, subgroup VM_15685 IPR015344 Vibrio cholerae neuraminidase, lectin-like domain VM_15685 IPR036278 VM_15685 VM_15690 IPR003764 N-acetylglucosamine-6-phosphate deacetylase VM_15690 IPR006680 Amidohydrolase 1 VM_15690 IPR011059 Metal-dependent hydrolase, composite domain VM_15690 IPR032466 VM_15690 VM_15695 IPR000600 ROK VM_15695 IPR023945 N-acetylmannosamine kinase, bacterial VM_15700 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase VM_15700 IPR011060 Ribulose-phosphate binding barrel VM_15700 IPR013785 Aldolase-type TIM barrel VM_15710 IPR004682 TRAP dicarboxylate transporter VM_15710 IPR018389 Bacterial extracellular solute-binding protein, family 7 VM_15710 IPR038404 VM_15710 VM_15715 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component VM_15720 IPR004681 TRAP transporter permease protein VM_15720 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VM_15725 IPR002220 DapA-like VM_15725 IPR013785 Aldolase-type TIM barrel VM_15730 IPR000281 Helix-turn-helix protein RpiR VM_15730 IPR001347 Sugar isomerase (SIS) VM_15730 IPR009057 Homeodomain-like VM_15730 IPR036388 VM_15730 VM_15735 IPR006652 Kelch repeat type 1 VM_15735 IPR015915 Kelch-type beta propeller VM_15735 IPR019936 Mutatrotase, YjhT-like VM_15740 IPR011498 Kelch repeat type 2 VM_15740 IPR015915 Kelch-type beta propeller VM_15740 IPR019936 Mutatrotase, YjhT-like VM_15745 IPR032816 VM_15745 VM_15755 IPR003660 HAMP linker domain VM_15755 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_15755 IPR004090 Chemotaxis methyl-accepting receptor VM_15760 IPR003660 HAMP linker domain VM_15760 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_15760 IPR004090 Chemotaxis methyl-accepting receptor VM_15765 IPR001633 EAL domain VM_15765 IPR035919 VM_15765 VM_15775 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase VM_15775 IPR016174 Di-haem cytochrome, transmembrane VM_15780 IPR007372 Lipid/polyisoprenoid-binding, YceI-like VM_15780 IPR023480 Uncharacterised protein family UPF0312/YceI VM_15780 IPR036761 VM_15780 VM_15785 IPR000292 Formate/nitrite transporter VM_15785 IPR000644 CBS domain VM_15785 IPR023271 Aquaporin-like VM_15785 IPR023999 Formate transporter FocA, putative VM_15785 IPR024002 Formate/nitrite transporter, conserved site VM_15790 IPR000847 Transcription regulator HTH, LysR VM_15790 IPR005119 LysR, substrate-binding VM_15790 IPR036388 VM_15790 VM_15790 IPR036390 VM_15790 VM_15795 IPR009476 Protein of unknown function DUF1097 VM_15800 IPR022602 Protein of unknown function DUF2813 VM_15800 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_15805 IPR004843 Calcineurin-like phosphoesterase domain, apaH type VM_15805 IPR006179 5'-Nucleotidase/apyrase VM_15805 IPR008334 5'-Nucleotidase, C-terminal VM_15805 IPR029052 Metallo-dependent phosphatase-like VM_15805 IPR036907 VM_15805 VM_15810 IPR005496 Integral membrane protein TerC VM_15810 IPR022369 Integral membrane protein TerC, riboswitch-linked VM_15820 IPR013987 PhnA protein, N-terminal VM_15820 IPR013988 PhnA protein, C-terminal VM_15820 IPR013991 PhnA protein N-terminal, proteobacterial VM_15825 IPR008915 Peptidase M50 VM_15840 IPR010706 Fatty acid cis-trans isomerase VM_15845 IPR011701 Major facilitator superfamily VM_15845 IPR036259 VM_15845 VM_15850 IPR021768 Protein of unknown function DUF3332 VM_15855 IPR000160 GGDEF domain VM_15855 IPR001638 Extracellular solute-binding protein, family 3 VM_15855 IPR029787 Nucleotide cyclase VM_15865 IPR001647 DNA-binding HTH domain, TetR-type VM_15865 IPR009057 Homeodomain-like VM_15865 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VM_15870 IPR011701 Major facilitator superfamily VM_15870 IPR036259 VM_15870 VM_15875 IPR029055 Nucleophile aminohydrolases, N-terminal VM_15880 IPR021621 Protein of unknown function DUF3233 VM_15885 IPR000160 GGDEF domain VM_15885 IPR029787 Nucleotide cyclase VM_15890 IPR019657 Late competence development protein ComFB VM_15895 IPR018772 Transcription activator HlyU VM_15900 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain VM_15900 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal VM_15900 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 VM_15900 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal VM_15900 IPR026255 NAD(P) transhydrogenase, alpha subunit VM_15900 IPR036291 VM_15900 VM_15905 IPR012136 NADP transhydrogenase, beta subunit VM_15905 IPR029035 DHS-like NAD/FAD-binding domain VM_15905 IPR034300 VM_15905 VM_15910 IPR003594 Histidine kinase-like ATPase, C-terminal domain VM_15910 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain VM_15910 IPR021821 Protein of unknown function DUF3404 VM_15910 IPR036097 VM_15910 VM_15910 IPR036890 VM_15910 VM_15915 IPR001789 Signal transduction response regulator, receiver domain VM_15915 IPR001867 Signal transduction response regulator, C-terminal VM_15915 IPR011006 CheY-like superfamily VM_15915 IPR016032 Signal transduction response regulator, C-terminal effector VM_15915 IPR036388 VM_15915 VM_15920 IPR021290 Protein of unknown function DUF2861 VM_15925 IPR032811 VM_15925 VM_15930 IPR005371 Uncharacterised protein family UPF0181 VM_15935 IPR010982 Lambda repressor-like, DNA-binding domain VM_15950 IPR015947 PUA-like domain VM_15950 IPR039440 VM_15950 VM_15985 IPR002789 Domain of unknown function DUF87 VM_15985 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_16045 IPR021077 Bacteriophage phi-Lf, Orf112 VM_16050 IPR009057 Homeodomain-like VM_16050 IPR018060 DNA binding HTH domain, AraC-type VM_16050 IPR018062 HTH domain AraC-type, conserved site VM_16050 IPR020449 Transcription regulator HTH, AraC- type VM_16055 IPR009057 Homeodomain-like VM_16055 IPR018060 DNA binding HTH domain, AraC-type VM_16055 IPR020449 Transcription regulator HTH, AraC- type VM_16060 IPR000531 TonB-dependent receptor, beta-barrel VM_16060 IPR012910 TonB-dependent receptor, plug VM_16060 IPR036942 VM_16060 VM_16065 IPR036259 VM_16065 VM_16070 IPR000873 AMP-dependent synthetase/ligase VM_16070 IPR001242 Condensation domain VM_16070 IPR009081 Acyl carrier protein-like VM_16070 IPR010071 Amino acid adenylation domain VM_16070 IPR020806 Polyketide synthase, phosphopantetheine-binding domain VM_16070 IPR020845 AMP-binding, conserved site VM_16070 IPR023213 Chloramphenicol acetyltransferase-like domain VM_16070 IPR025714 Methyltransferase domain VM_16070 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VM_16070 IPR036736 VM_16070 VM_16075 IPR000873 AMP-dependent synthetase/ligase VM_16075 IPR001031 Thioesterase VM_16075 IPR001227 Acyl transferase domain VM_16075 IPR001242 Condensation domain VM_16075 IPR006162 Phosphopantetheine attachment site VM_16075 IPR009081 Acyl carrier protein-like VM_16075 IPR010071 Amino acid adenylation domain VM_16075 IPR013217 Methyltransferase type 12 VM_16075 IPR013968 Polyketide synthase, KR VM_16075 IPR014030 Beta-ketoacyl synthase, N-terminal VM_16075 IPR014031 Beta-ketoacyl synthase, C-terminal VM_16075 IPR014043 Acyl transferase VM_16075 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VM_16075 IPR016039 Thiolase-like VM_16075 IPR020801 Polyketide synthase, acyl transferase domain VM_16075 IPR020806 Polyketide synthase, phosphopantetheine-binding domain VM_16075 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VM_16075 IPR020845 AMP-binding, conserved site VM_16075 IPR023213 Chloramphenicol acetyltransferase-like domain VM_16075 IPR025110 AMP-binding enzyme C-terminal domain VM_16075 IPR029058 Alpha/Beta hydrolase fold VM_16075 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VM_16075 IPR032821 VM_16075 VM_16075 IPR036291 VM_16075 VM_16075 IPR036736 VM_16075 VM_16080 IPR000683 Oxidoreductase, N-terminal VM_16080 IPR010091 Thiazolinyl imide reductase VM_16080 IPR036291 VM_16080 VM_16085 IPR001031 Thioesterase VM_16085 IPR029058 Alpha/Beta hydrolase fold VM_16090 IPR005801 ADC synthase VM_16090 IPR015890 Chorismate binding, C-terminal VM_16090 IPR019996 Salicylate synthase VM_16095 IPR000873 AMP-dependent synthetase/ligase VM_16095 IPR025110 AMP-binding enzyme C-terminal domain VM_16100 IPR003439 ABC transporter-like VM_16100 IPR003593 AAA+ ATPase domain VM_16100 IPR011527 ABC transporter type 1, transmembrane domain VM_16100 IPR017871 ABC transporter, conserved site VM_16100 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_16100 IPR036640 VM_16100 VM_16105 IPR003439 ABC transporter-like VM_16105 IPR003593 AAA+ ATPase domain VM_16105 IPR011527 ABC transporter type 1, transmembrane domain VM_16105 IPR017871 ABC transporter, conserved site VM_16105 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_16105 IPR036640 VM_16105 VM_16110 IPR003542 Enterobactin synthetase-like, component D VM_16110 IPR008278 4'-phosphopantetheinyl transferase superfamily VM_16110 IPR037143 VM_16110 VM_16115 IPR001950 Translation initiation factor SUI1 VM_16115 IPR005872 Archaeal/bacterial translation initiation factor SUI1 VM_16115 IPR036877 VM_16115 VM_16120 IPR021753 Protein of unknown function DUF3319 VM_16125 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site VM_16125 IPR005905 D-alanine--D-alanine ligase VM_16125 IPR011095 D-alanine--D-alanine ligase, C-terminal VM_16125 IPR011127 D-alanine--D-alanine ligase, N-terminal domain VM_16125 IPR013815 ATP-grasp fold, subdomain 1 VM_16125 IPR016185 Pre-ATP-grasp domain VM_16130 IPR007730 Sporulation-related domain VM_16130 IPR036680 VM_16130 VM_16135 IPR000182 GNAT domain VM_16135 IPR003781 CoA-binding VM_16135 IPR013815 ATP-grasp fold, subdomain 1 VM_16135 IPR016102 Succinyl-CoA synthetase-like VM_16135 IPR016181 Acyl-CoA N-acyltransferase VM_16135 IPR032875 VM_16135 VM_16135 IPR036291 VM_16135 VM_16140 IPR000847 Transcription regulator HTH, LysR VM_16140 IPR005119 LysR, substrate-binding VM_16140 IPR036388 VM_16140 VM_16140 IPR036390 VM_16140 VM_16145 IPR000531 TonB-dependent receptor, beta-barrel VM_16145 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor VM_16145 IPR011276 TonB-dependent haem/haemoglobin receptor VM_16145 IPR012910 TonB-dependent receptor, plug VM_16145 IPR036942 VM_16145 VM_16145 IPR037066 VM_16145 VM_16150 IPR000914 Bacterial extracellular solute-binding protein, family 5 VM_16150 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain VM_16155 IPR021811 Protein of unknown function DUF3389 VM_16160 IPR003736 Phenylacetic acid degradation-related domain VM_16160 IPR006683 Thioesterase superfamily VM_16160 IPR029069 HotDog domain VM_16165 IPR001915 Peptidase M48 VM_16170 IPR036986 VM_16170 VM_16175 IPR001638 Extracellular solute-binding protein, family 3 VM_16180 IPR004045 Glutathione S-transferase, N-terminal VM_16180 IPR004046 Glutathione S-transferase, C-terminal VM_16180 IPR036249 VM_16180 VM_16180 IPR036282 VM_16180 VM_16185 IPR004045 Glutathione S-transferase, N-terminal VM_16185 IPR036249 VM_16185 VM_16185 IPR036282 VM_16185 VM_16190 IPR001647 DNA-binding HTH domain, TetR-type VM_16190 IPR009057 Homeodomain-like VM_16190 IPR036271 VM_16190 VM_16195 IPR005175 Domain of unknown function DUF296 VM_16205 IPR003439 ABC transporter-like VM_16205 IPR003593 AAA+ ATPase domain VM_16205 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal VM_16205 IPR017871 ABC transporter, conserved site VM_16205 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_16210 IPR000515 MetI-like domain VM_16210 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VM_16210 IPR035906 VM_16210 VM_16215 IPR000515 MetI-like domain VM_16215 IPR035906 VM_16215 VM_16220 IPR000914 Bacterial extracellular solute-binding protein, family 5 VM_16220 IPR030678 VM_16220 VM_16225 IPR000086 NUDIX hydrolase domain VM_16225 IPR015797 NUDIX hydrolase domain-like VM_16225 IPR020084 NUDIX hydrolase, conserved site VM_16235 IPR005590 Protein of unknown function DUF333 VM_16240 IPR003848 Domain of unknown function DUF218 VM_16245 IPR005279 Amino acid/peptide transporter family VM_16245 IPR011701 Major facilitator superfamily VM_16245 IPR036259 VM_16245 VM_16250 IPR000620 Drug/metabolite transporter VM_16250 IPR017725 Phosphonate utilization associated transmembrane protein, putative VM_16255 IPR000524 Transcription regulator HTH, GntR VM_16255 IPR011663 UbiC transcription regulator-associated VM_16255 IPR017722 Transcription regulator PhnR VM_16255 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain VM_16255 IPR036388 VM_16255 VM_16255 IPR036390 VM_16255 VM_16260 IPR000515 MetI-like domain VM_16260 IPR017664 2-aminoethylphosphonate ABC transport system, permease protein, putative VM_16260 IPR035906 VM_16260 VM_16265 IPR003439 ABC transporter-like VM_16265 IPR003593 AAA+ ATPase domain VM_16265 IPR008995 Molybdate/tungstate binding, C-terminal VM_16265 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 VM_16265 IPR017871 ABC transporter, conserved site VM_16265 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_16270 IPR017663 ABC transport system, 1-aminoethylphosphonate-binding protein, putative VM_16270 IPR026045 Ferric binding protein VM_16275 IPR000192 Aminotransferase class V domain VM_16275 IPR012703 2-aminoethylphosphonate--pyruvate transaminase VM_16275 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VM_16275 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VM_16275 IPR015424 Pyridoxal phosphate-dependent transferase VM_16275 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase VM_16280 IPR005814 Aminotransferase class-III VM_16280 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VM_16280 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VM_16280 IPR015424 Pyridoxal phosphate-dependent transferase VM_16285 IPR006323 Phosphonoacetaldehyde hydrolase VM_16285 IPR006439 HAD hydrolase, subfamily IA VM_16285 IPR023198 Phosphoglycolate phosphatase, domain 2 VM_16285 IPR023214 HAD-like domain VM_16285 IPR036412 VM_16285 VM_16290 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal VM_16290 IPR023459 Transcription elongation factor GreA/GreB family VM_16290 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain VM_16290 IPR036953 VM_16290 VM_16295 IPR006439 HAD hydrolase, subfamily IA VM_16295 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB VM_16295 IPR023198 Phosphoglycolate phosphatase, domain 2 VM_16295 IPR023214 HAD-like domain VM_16295 IPR036412 VM_16295 VM_16300 IPR000847 Transcription regulator HTH, LysR VM_16300 IPR005119 LysR, substrate-binding VM_16300 IPR036388 VM_16300 VM_16300 IPR036390 VM_16300 VM_16310 IPR026041 Enhancing lycopene biosynthesis protein 2 VM_16310 IPR029062 Class I glutamine amidotransferase-like VM_16315 IPR001670 Alcohol dehydrogenase, iron-type VM_16315 IPR018211 Alcohol dehydrogenase, iron-type, conserved site VM_16320 IPR001185 Large-conductance mechanosensitive channel VM_16320 IPR019823 Large-conductance mechanosensitive channel, conserved site VM_16320 IPR036019 VM_16320 VM_16320 IPR037673 VM_16320 VM_16325 IPR000559 Formate-tetrahydrofolate ligase, FTHFS VM_16325 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site VM_16325 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_16330 IPR002569 Peptide methionine sulphoxide reductase MsrA VM_16330 IPR002579 Peptide methionine sulphoxide reductase MrsB VM_16330 IPR011057 Mss4-like VM_16330 IPR036509 VM_16330 VM_16335 IPR001474 GTP cyclohydrolase I VM_16335 IPR018234 GTP cyclohydrolase I, conserved site VM_16335 IPR020602 GTP cyclohydrolase I domain VM_16340 IPR001453 Molybdopterin binding domain VM_16340 IPR005110 MoeA, N-terminal and linker domain VM_16340 IPR005111 MoeA, C-terminal, domain IV VM_16340 IPR008284 Molybdenum cofactor biosynthesis, conserved site VM_16340 IPR036135 VM_16340 VM_16340 IPR036425 VM_16340 VM_16340 IPR036688 VM_16340 VM_16345 IPR000594 UBA/THIF-type NAD/FAD binding fold VM_16345 IPR012730 Molybdopterin synthase sulfurylase MoeB VM_16345 IPR035985 VM_16345 VM_16350 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VM_16355 IPR001763 Rhodanese-like domain VM_16355 IPR036873 VM_16355 VM_16360 IPR001223 Glycoside hydrolase, family 18, catalytic domain VM_16360 IPR001579 Glycoside hydrolase, chitinase active site VM_16360 IPR011583 Chitinase II VM_16360 IPR017853 Glycoside hydrolase, superfamily VM_16360 IPR029070 Chitinase insertion domain VM_16365 IPR007324 Sugar-binding domain, putative VM_16365 IPR037171 VM_16365 VM_16370 IPR001585 Transaldolase VM_16370 IPR004730 Transaldolase type 1 VM_16370 IPR013785 Aldolase-type TIM barrel VM_16370 IPR018225 Transaldolase, active site VM_16375 IPR005474 Transketolase, N-terminal VM_16375 IPR005475 Transketolase-like, pyrimidine-binding domain VM_16375 IPR005478 Transketolase, bacterial-like VM_16375 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II VM_16375 IPR020826 Transketolase binding site VM_16375 IPR029061 Thiamin diphosphate-binding fold VM_16375 IPR033248 VM_16375 VM_16380 IPR004843 Calcineurin-like phosphoesterase domain, apaH type VM_16380 IPR029052 Metallo-dependent phosphatase-like VM_16385 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_16405 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VM_16405 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain VM_16405 IPR036291 VM_16405 VM_16410 IPR025638 Protein of unknown function DUF4336 VM_16410 IPR036866 VM_16410 VM_16415 IPR000182 GNAT domain VM_16415 IPR016181 Acyl-CoA N-acyltransferase VM_16420 IPR000868 Isochorismatase-like VM_16420 IPR036380 VM_16420 VM_16425 IPR000086 NUDIX hydrolase domain VM_16425 IPR015797 NUDIX hydrolase domain-like VM_16425 IPR020084 NUDIX hydrolase, conserved site VM_16425 IPR020476 NUDIX hydrolase VM_16430 IPR009707 GlpM VM_16435 IPR016876 Uncharacterised conserved protein UCP028234 VM_16435 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VM_16440 IPR000847 Transcription regulator HTH, LysR VM_16440 IPR005119 LysR, substrate-binding VM_16440 IPR036388 VM_16440 VM_16440 IPR036390 VM_16440 VM_16445 IPR007138 Antibiotic biosynthesis monooxygenase-like domain VM_16445 IPR011008 Dimeric alpha-beta barrel VM_16450 IPR000415 Nitroreductase-like VM_16450 IPR029479 Nitroreductase VM_16455 IPR001036 Acriflavin resistance protein VM_16455 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VM_16460 IPR006143 RND efflux pump, membrane fusion protein VM_16460 IPR032317 VM_16460 VM_16470 IPR007272 Sulphur transport domain VM_16475 IPR001845 HTH ArsR-type DNA-binding domain VM_16475 IPR036388 VM_16475 VM_16475 IPR036390 VM_16475 VM_16480 IPR021309 Protein of unknown function DUF2892 VM_16485 IPR001763 Rhodanese-like domain VM_16485 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VM_16485 IPR016156 FAD/NAD-linked reductase, dimerisation domain VM_16485 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain VM_16485 IPR036188 VM_16485 VM_16485 IPR036873 VM_16485 VM_16490 IPR000847 Transcription regulator HTH, LysR VM_16490 IPR005119 LysR, substrate-binding VM_16490 IPR036388 VM_16490 VM_16490 IPR036390 VM_16490 VM_16495 IPR039562 VM_16495 VM_16500 IPR016926 Uncharacterised conserved protein UCP029594 VM_16500 IPR022604 Protein of unknown function DUF2955 VM_16505 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VM_16510 IPR002123 Phospholipid/glycerol acyltransferase VM_16510 IPR016181 Acyl-CoA N-acyltransferase VM_16520 IPR007029 YHS domain VM_16525 IPR008551 Protein of unknown function DUF833 VM_16530 IPR034660 VM_16530 VM_16540 IPR032816 VM_16540 VM_16545 IPR021422 Protein of unknown function DUF3069 VM_16545 IPR023132 Sama2622-like domain VM_16550 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase VM_16550 IPR006076 FAD dependent oxidoreductase VM_16550 IPR031656 VM_16550 VM_16550 IPR036188 VM_16550 VM_16550 IPR038299 VM_16550 VM_16555 IPR000014 PAS domain VM_16555 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_16555 IPR013655 PAS fold-3 VM_16555 IPR035965 VM_16555 VM_16560 IPR006664 Outer membrane protein, bacterial VM_16560 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal VM_16560 IPR006690 Outer membrane protein, OmpA-like, conserved site VM_16560 IPR036737 VM_16560 VM_16565 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal VM_16565 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain VM_16570 IPR002559 Transposase, IS4-like VM_16570 IPR003201 Transposase Tn5, dimerisation VM_16570 IPR012337 Ribonuclease H-like domain VM_16570 IPR014735 Transposase, Tn5-like, N-terminal VM_16570 IPR014736 Transposase, Tn5-like, core VM_16570 IPR014737 Transposase, Tn5-like, C-terminal VM_16570 IPR038215 VM_16570 VM_16575 IPR006439 HAD hydrolase, subfamily IA VM_16575 IPR010976 Beta-phosphoglucomutase hydrolase VM_16575 IPR023198 Phosphoglycolate phosphatase, domain 2 VM_16575 IPR023214 HAD-like domain VM_16575 IPR036412 VM_16575 VM_16580 IPR003660 HAMP linker domain VM_16580 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_16580 IPR004090 Chemotaxis methyl-accepting receptor VM_16585 IPR004669 C4-dicarboxylate anaerobic carrier VM_16585 IPR018385 C4-dicarboxylate anaerobic carrier-like VM_16590 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form VM_16590 IPR005130 Serine dehydratase-like, alpha subunit VM_16590 IPR005131 Serine dehydratase beta chain VM_16590 IPR029009 Allosteric substrate binding domain VM_16595 IPR000792 Transcription regulator LuxR, C-terminal VM_16595 IPR001789 Signal transduction response regulator, receiver domain VM_16595 IPR011006 CheY-like superfamily VM_16595 IPR016032 Signal transduction response regulator, C-terminal effector VM_16600 IPR003594 Histidine kinase-like ATPase, C-terminal domain VM_16600 IPR003660 HAMP linker domain VM_16600 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain VM_16600 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing VM_16600 IPR029095 NarX-like, N-terminal VM_16600 IPR036890 VM_16600 VM_16605 IPR004496 Ferredoxin-type protein NapF VM_16605 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VM_16605 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VM_16610 IPR005623 Chaperone NapD, nitrate reductase assembly VM_16615 IPR006656 Molybdopterin oxidoreductase VM_16615 IPR006657 Molydopterin dinucleotide-binding domain VM_16615 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain VM_16615 IPR009010 Aspartate decarboxylase-like domain VM_16615 IPR010051 Periplasmic nitrate reductase, large subunit VM_16615 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site VM_16620 IPR005591 Nitrate reductase cytochrome c-type subunit NapB VM_16620 IPR036280 VM_16620 VM_16625 IPR005126 NapC/NirT cytochrome c, N-terminal VM_16625 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT VM_16625 IPR024717 Denitrification system component NapC/NirT/NrfH VM_16625 IPR036280 VM_16625 VM_16625 IPR038266 VM_16625 VM_16630 IPR014175 Conserved hypothetical protein CHP02808 VM_16635 IPR003607 HD/PDEase domain VM_16635 IPR006674 HD domain VM_16640 IPR000792 Transcription regulator LuxR, C-terminal VM_16640 IPR001789 Signal transduction response regulator, receiver domain VM_16640 IPR011006 CheY-like superfamily VM_16640 IPR016032 Signal transduction response regulator, C-terminal effector VM_16645 IPR003594 Histidine kinase-like ATPase, C-terminal domain VM_16645 IPR007895 MASE1 VM_16645 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain VM_16645 IPR036890 VM_16645 VM_16650 IPR000849 Sugar phosphate transporter VM_16650 IPR011701 Major facilitator superfamily VM_16650 IPR036259 VM_16650 VM_16655 IPR026045 Ferric binding protein VM_16660 IPR000515 MetI-like domain VM_16660 IPR035906 VM_16660 VM_16665 IPR003439 ABC transporter-like VM_16665 IPR003593 AAA+ ATPase domain VM_16665 IPR008995 Molybdate/tungstate binding, C-terminal VM_16665 IPR013611 Transport-associated OB, type 2 VM_16665 IPR017871 ABC transporter, conserved site VM_16665 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_16670 IPR006664 Outer membrane protein, bacterial VM_16670 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal VM_16670 IPR036737 VM_16670 VM_16675 IPR036465 VM_16675 VM_16680 IPR031582 VM_16680 VM_16685 IPR012495 TadE-like VM_16690 IPR011990 Tetratricopeptide-like helical domain VM_16690 IPR019734 Tetratricopeptide repeat VM_16695 IPR018076 Type II secretion system F domain VM_16700 IPR018076 Type II secretion system F domain VM_16705 IPR001482 Type II secretion system protein E VM_16705 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_16710 IPR025669 AAA domain VM_16710 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_16720 IPR001775 GspD/PilQ family VM_16720 IPR004846 Type II/III secretion system VM_16720 IPR032789 VM_16720 VM_16730 IPR007047 Flp/Fap pilin component VM_16735 IPR000045 Prepilin type IV endopeptidase, peptidase domain VM_16740 IPR000847 Transcription regulator HTH, LysR VM_16740 IPR036388 VM_16740 VM_16740 IPR036390 VM_16740 VM_16750 IPR010941 Poly-beta-hydroxybutyrate polymerase, central domain VM_16750 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I VM_16750 IPR029058 Alpha/Beta hydrolase fold VM_16755 IPR014176 Phasin, subfamily 3 VM_16755 IPR018968 Phasin VM_16760 IPR002155 Thiolase VM_16760 IPR016039 Thiolase-like VM_16760 IPR020610 Thiolase, active site VM_16760 IPR020613 Thiolase, conserved site VM_16760 IPR020615 Thiolase, acyl-enzyme intermediate active site VM_16760 IPR020616 Thiolase, N-terminal VM_16760 IPR020617 Thiolase, C-terminal VM_16765 IPR002347 Glucose/ribitol dehydrogenase VM_16765 IPR011283 Acetoacetyl-CoA reductase VM_16765 IPR020904 Short-chain dehydrogenase/reductase, conserved site VM_16765 IPR036291 VM_16765 VM_16770 IPR002686 Transposase IS200-like VM_16770 IPR036515 VM_16770 VM_16775 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain VM_16775 IPR004867 Chitobiase/beta-hexosaminidase C-terminal domain VM_16775 IPR008965 Carbohydrate-binding domain VM_16775 IPR012291 Cellulose-binding family II/chitobiase, carbohydrate-binding domain VM_16775 IPR013783 Immunoglobulin-like fold VM_16775 IPR014756 Immunoglobulin E-set VM_16775 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal VM_16775 IPR015883 Glycoside hydrolase family 20, catalytic core VM_16775 IPR017853 Glycoside hydrolase, superfamily VM_16775 IPR025705 Beta-hexosaminidase VM_16775 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like VM_16785 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit VM_16785 IPR036542 VM_16785 VM_16790 IPR003352 Phosphotransferase system, EIIC VM_16790 IPR004501 Phosphotransferase system, EIIC component, type 3 VM_16790 IPR004796 Phosphotransferase system, cellobiose-type IIC component VM_16795 IPR003501 Phosphotransferase system, EIIB component, type 2/3 VM_16795 IPR036095 VM_16795 VM_16800 IPR005665 Protein-export membrane protein SecF, bacterial VM_16800 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VM_16800 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VM_16800 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VM_16805 IPR005791 Protein translocase subunit SecD VM_16805 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VM_16805 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VM_16805 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VM_16805 IPR027398 SecD export protein N-terminal TM domain VM_16820 IPR000014 PAS domain VM_16820 IPR000160 GGDEF domain VM_16820 IPR001610 PAC motif VM_16820 IPR029151 Periplasmic sensor domain-like VM_16820 IPR029787 Nucleotide cyclase VM_16820 IPR035965 VM_16820 VM_16825 IPR005835 Nucleotidyl transferase VM_16825 IPR005836 ADP-glucose pyrophosphorylase, conserved site VM_16825 IPR011004 Trimeric LpxA-like VM_16825 IPR011831 Glucose-1-phosphate adenylyltransferase VM_16825 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial VM_16825 IPR029044 Nucleotide-diphospho-sugar transferases VM_16830 IPR001223 Glycoside hydrolase, family 18, catalytic domain VM_16830 IPR001579 Glycoside hydrolase, chitinase active site VM_16830 IPR003610 Carbohydrate-binding module family 5/12 VM_16830 IPR009470 Chitinase, C-terminal VM_16830 IPR011583 Chitinase II VM_16830 IPR013783 Immunoglobulin-like fold VM_16830 IPR017853 Glycoside hydrolase, superfamily VM_16830 IPR029070 Chitinase insertion domain VM_16830 IPR036573 VM_16830 VM_16835 IPR001670 Alcohol dehydrogenase, iron-type VM_16840 IPR012506 YhhN-like VM_16845 IPR001789 Signal transduction response regulator, receiver domain VM_16845 IPR002078 RNA polymerase sigma factor 54 interaction domain VM_16845 IPR002197 DNA binding HTH domain, Fis-type VM_16845 IPR009057 Homeodomain-like VM_16845 IPR011006 CheY-like superfamily VM_16845 IPR025944 Sigma-54 interaction domain, conserved site VM_16845 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_16850 IPR003594 Histidine kinase-like ATPase, C-terminal domain VM_16850 IPR003660 HAMP linker domain VM_16850 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain VM_16850 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_16850 IPR017116 Signal transduction histidine kinase, PgtB VM_16850 IPR036097 VM_16850 VM_16850 IPR036890 VM_16850 VM_16865 IPR000849 Sugar phosphate transporter VM_16865 IPR011701 Major facilitator superfamily VM_16865 IPR036259 VM_16865 VM_16870 IPR001697 Pyruvate kinase VM_16870 IPR011037 Pyruvate kinase-like, insert domain VM_16870 IPR015793 Pyruvate kinase, barrel VM_16870 IPR015795 Pyruvate kinase, C-terminal VM_16870 IPR015806 Pyruvate kinase, beta-barrel insert domain VM_16870 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain VM_16870 IPR036918 VM_16870 VM_16875 IPR001789 Signal transduction response regulator, receiver domain VM_16875 IPR003594 Histidine kinase-like ATPase, C-terminal domain VM_16875 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain VM_16875 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_16875 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain VM_16875 IPR011006 CheY-like superfamily VM_16875 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS VM_16875 IPR036097 VM_16875 VM_16875 IPR036641 VM_16875 VM_16875 IPR036890 VM_16875 VM_16875 IPR038188 VM_16875 VM_16880 IPR001761 Periplasmic binding protein/LacI sugar binding domain VM_16880 IPR014301 TMAO reductase system periplasmic, TorT VM_16880 IPR028082 Periplasmic binding protein-like I VM_16885 IPR004363 Methylglyoxal synthase VM_16885 IPR011607 Methylglyoxal synthase-like domain VM_16885 IPR018148 Methylglyoxal synthase, active site VM_16885 IPR036914 VM_16885 VM_16895 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VM_16895 IPR036938 VM_16895 VM_16900 IPR000829 Diacylglycerol kinase, prokaryotic VM_16900 IPR036945 VM_16900 VM_16905 IPR025711 PepSY domain VM_16910 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase VM_16910 IPR016174 Di-haem cytochrome, transmembrane VM_16915 IPR001570 Peptidase M4, C-terminal VM_16915 IPR013856 Peptidase M4 domain VM_16915 IPR023612 Peptidase M4 VM_16915 IPR027268 VM_16915 VM_16920 IPR013986 DExx box DNA helicase domain VM_16920 IPR014017 DNA helicase, UvrD-like, C-terminal VM_16920 IPR022161 DNA helicase IV, N-terminal domain VM_16920 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_16920 IPR034739 VM_16920 VM_16925 IPR010019 Integral membrane protein, YccS VM_16925 IPR010020 Integral membrane protein, YccS/YhfK VM_16925 IPR032692 VM_16925 VM_16940 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II VM_16940 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain VM_16940 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain VM_16940 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain VM_16940 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site VM_16945 IPR003439 ABC transporter-like VM_16945 IPR003593 AAA+ ATPase domain VM_16945 IPR005116 Transport-associated OB, type 1 VM_16945 IPR008995 Molybdate/tungstate binding, C-terminal VM_16945 IPR011868 Molybdate ABC transporter, ATP-binding protein VM_16945 IPR017871 ABC transporter, conserved site VM_16945 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_16950 IPR000515 MetI-like domain VM_16950 IPR011867 Molybdate ABC transporter, permease protein VM_16950 IPR035906 VM_16950 VM_16955 IPR005950 Molybdenum ABC transporter, periplasmic binding protein VM_16960 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain VM_16960 IPR004459 Cobyric acid synthase CobQ VM_16960 IPR011698 CobB/CobQ-like glutamine amidotransferase VM_16960 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_16960 IPR029062 Class I glutamine amidotransferase-like VM_16965 IPR005220 Viral OB-fold, YgiW VM_16965 IPR036700 VM_16965 VM_16975 IPR009875 PilZ domain VM_16975 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal VM_16975 IPR012349 FMN-binding split barrel VM_16980 IPR001789 Signal transduction response regulator, receiver domain VM_16980 IPR003594 Histidine kinase-like ATPase, C-terminal domain VM_16980 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain VM_16980 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_16980 IPR011006 CheY-like superfamily VM_16980 IPR015387 LuxQ, periplasmic VM_16980 IPR029151 Periplasmic sensor domain-like VM_16980 IPR036097 VM_16980 VM_16980 IPR036890 VM_16980 VM_16985 IPR025997 Periplasmic binding protein domain VM_16985 IPR028082 Periplasmic binding protein-like I VM_16990 IPR032811 VM_16990 VM_16995 IPR000305 GIY-YIG nuclease superfamily VM_16995 IPR035901 VM_16995 VM_17000 IPR007432 Protein of unknown function DUF480 VM_17000 IPR036388 VM_17000 VM_17000 IPR036390 VM_17000 VM_17010 IPR007458 Protein of unknown function DUF496 VM_17015 IPR019629 Uncharacterised protein family HI1736/YgjV VM_17015 IPR020137 Uncharacterised protein family HI1736 VM_17020 IPR000577 VM_17020 VM_17020 IPR005999 Glycerol kinase VM_17020 IPR018483 Carbohydrate kinase, FGGY, conserved site VM_17020 IPR018484 Carbohydrate kinase, FGGY, N-terminal VM_17020 IPR018485 Carbohydrate kinase, FGGY, C-terminal VM_17025 IPR000425 Major intrinsic protein VM_17025 IPR022357 Major intrinsic protein, conserved site VM_17025 IPR023271 Aquaporin-like VM_17035 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase VM_17035 IPR006076 FAD dependent oxidoreductase VM_17035 IPR007419 BFD-like [2Fe-2S]-binding domain VM_17035 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit VM_17035 IPR036188 VM_17035 VM_17040 IPR003953 FAD binding domain VM_17040 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit VM_17040 IPR036188 VM_17040 VM_17045 IPR004017 Cysteine-rich domain VM_17045 IPR009051 Alpha-helical ferredoxin VM_17045 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit VM_17045 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VM_17045 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VM_17050 IPR011053 Single hybrid motif VM_17055 IPR029044 Nucleotide-diphospho-sugar transferases VM_17060 IPR000160 GGDEF domain VM_17060 IPR029787 Nucleotide cyclase VM_17065 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 VM_17065 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal VM_17065 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VM_17065 IPR016039 Thiolase-like VM_17070 IPR005746 Thioredoxin VM_17070 IPR013766 Thioredoxin domain VM_17070 IPR036249 VM_17070 VM_17075 IPR011701 Major facilitator superfamily VM_17075 IPR036259 VM_17075 VM_17080 IPR020483 Uncharacterised protein family YgbA VM_17085 IPR002921 Fungal lipase-like domain VM_17085 IPR029058 Alpha/Beta hydrolase fold VM_17100 IPR006656 Molybdopterin oxidoreductase VM_17100 IPR006657 Molydopterin dinucleotide-binding domain VM_17100 IPR009010 Aspartate decarboxylase-like domain VM_17100 IPR010046 Oxidoreductase alpha (molybdopterin) subunit VM_17105 IPR000847 Transcription regulator HTH, LysR VM_17105 IPR005119 LysR, substrate-binding VM_17105 IPR036388 VM_17105 VM_17105 IPR036390 VM_17105 VM_17110 IPR003786 Protein FdhD VM_17110 IPR016193 Cytidine deaminase-like VM_17115 IPR000515 MetI-like domain VM_17115 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family VM_17115 IPR035906 VM_17115 VM_17120 IPR000515 MetI-like domain VM_17120 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family VM_17120 IPR035906 VM_17120 VM_17125 IPR001320 Ionotropic glutamate receptor VM_17125 IPR001638 Extracellular solute-binding protein, family 3 VM_17125 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein VM_17125 IPR018313 Extracellular solute-binding protein, family 3, conserved site VM_17130 IPR003439 ABC transporter-like VM_17130 IPR003593 AAA+ ATPase domain VM_17130 IPR017871 ABC transporter, conserved site VM_17130 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_17130 IPR030679 VM_17130 VM_17140 IPR002035 von Willebrand factor, type A VM_17140 IPR008912 Uncharacterised protein family CoxE-like VM_17140 IPR036465 VM_17140 VM_17145 IPR003593 AAA+ ATPase domain VM_17145 IPR011704 ATPase, dynein-related, AAA domain VM_17145 IPR022547 ATPase, RavA, C-terminal VM_17145 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_17150 IPR000086 NUDIX hydrolase domain VM_17150 IPR015797 NUDIX hydrolase domain-like VM_17150 IPR020084 NUDIX hydrolase, conserved site VM_17155 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase VM_17155 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VM_17155 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VM_17155 IPR015424 Pyridoxal phosphate-dependent transferase VM_17155 IPR023603 Threonine aldolase VM_17160 IPR009056 Cytochrome c-like domain VM_17160 IPR036909 VM_17160 VM_17165 IPR001647 DNA-binding HTH domain, TetR-type VM_17165 IPR009057 Homeodomain-like VM_17170 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site VM_17170 IPR001650 Helicase, C-terminal VM_17170 IPR011545 DEAD/DEAH box helicase domain VM_17170 IPR014001 Helicase, superfamily 1/2, ATP-binding domain VM_17170 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_17175 IPR007431 Acyl carrier protein phosphodiesterase VM_17185 IPR013059 Tryptophan/tyrosine transporter VM_17185 IPR013061 Tryptophan/tryrosine permease, conserved site VM_17185 IPR018227 Tryptophan/tyrosine permease VM_17190 IPR003660 HAMP linker domain VM_17190 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_17190 IPR004090 Chemotaxis methyl-accepting receptor VM_17195 IPR005886 UDP-glucose 4-epimerase GalE VM_17195 IPR016040 NAD(P)-binding domain VM_17195 IPR036291 VM_17195 VM_17200 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF VM_17200 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel VM_17205 IPR003833 Allophanate hydrolase subunit 1 VM_17205 IPR029000 Cyclophilin-like domain VM_17210 IPR003778 Allophanate hydrolase subunit 2 VM_17210 IPR029000 Cyclophilin-like domain VM_17215 IPR006076 FAD dependent oxidoreductase VM_17215 IPR036188 VM_17215 VM_17220 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal VM_17220 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like VM_17220 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation VM_17220 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal VM_17220 IPR017476 UDP-glucose/GDP-mannose dehydrogenase VM_17220 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type VM_17220 IPR036220 VM_17220 VM_17220 IPR036291 VM_17220 VM_17225 IPR003838 Permease FtsX-like VM_17230 IPR003439 ABC transporter-like VM_17230 IPR003593 AAA+ ATPase domain VM_17230 IPR017871 ABC transporter, conserved site VM_17230 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_17235 IPR008265 Lipase, GDSL, active site VM_17235 IPR013830 VM_17235 VM_17235 IPR036514 VM_17235 VM_17240 IPR010758 Trans-2-enoyl-CoA reductase VM_17240 IPR024906 Enoyl reductase FAD binding domain VM_17240 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative VM_17240 IPR036291 VM_17240 VM_17245 IPR000160 GGDEF domain VM_17245 IPR001633 EAL domain VM_17245 IPR003018 GAF domain VM_17245 IPR029016 GAF domain-like VM_17245 IPR029787 Nucleotide cyclase VM_17245 IPR035919 VM_17245 VM_17250 IPR019195 ABC transporter, ATPase, putative VM_17250 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_17255 IPR001623 DnaJ domain VM_17255 IPR021059 DnaJ-related protein, N-terminal VM_17255 IPR036869 VM_17255 VM_17260 IPR014509 Uncharacterised conserved protein UCP020606 VM_17265 IPR004323 Divalent ion tolerance protein, CutA VM_17265 IPR011322 Nitrogen regulatory PII-like, alpha/beta VM_17265 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VM_17275 IPR006439 HAD hydrolase, subfamily IA VM_17275 IPR023198 Phosphoglycolate phosphatase, domain 2 VM_17275 IPR023214 HAD-like domain VM_17275 IPR036412 VM_17275 VM_17285 IPR010292 Uncharacterised protein family CreA VM_17290 IPR011611 Carbohydrate kinase PfkB VM_17290 IPR029056 Ribokinase-like VM_17295 IPR002686 Transposase IS200-like VM_17295 IPR036515 VM_17295 VM_17300 IPR000917 Sulfatase VM_17300 IPR012160 Membrane sulfatase, HI1246-related VM_17300 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha VM_17300 IPR017850 Alkaline-phosphatase-like, core domain VM_17305 IPR001254 Peptidase S1 VM_17305 IPR001314 Peptidase S1A, chymotrypsin-type VM_17305 IPR009003 Trypsin-like cysteine/serine peptidase domain VM_17305 IPR018114 Peptidase S1, trypsin family, active site VM_17305 IPR033116 VM_17305 VM_17310 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site VM_17310 IPR001650 Helicase, C-terminal VM_17310 IPR005580 DbpA, RNA-binding VM_17310 IPR011545 DEAD/DEAH box helicase domain VM_17310 IPR012677 Nucleotide-binding, alpha-beta plait VM_17310 IPR014001 Helicase, superfamily 1/2, ATP-binding domain VM_17310 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_17310 IPR028618 ATP-dependent RNA helicase DeaD VM_17315 IPR001900 VM_17315 VM_17315 IPR003029 Ribosomal protein S1, RNA-binding domain VM_17315 IPR004476 Ribonuclease II/ribonuclease R VM_17315 IPR011129 Cold shock protein VM_17315 IPR011804 Ribonuclease II VM_17315 IPR012340 Nucleic acid-binding, OB-fold VM_17315 IPR013223 Ribonuclease B, N-terminal OB domain VM_17315 IPR022966 Ribonuclease II/R, conserved site VM_17320 IPR021388 Bacteriophage 933W, L0084 VM_17325 IPR011862 Phosphate binding protein VM_17325 IPR024370 PBP domain VM_17330 IPR002539 MaoC-like domain VM_17330 IPR029069 HotDog domain VM_17335 IPR007357 Deoxyribodipyrimidine photolyase-related protein VM_17335 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_17335 IPR036134 VM_17335 VM_17340 IPR004302 Chitin-binding, domain 3 VM_17340 IPR014756 Immunoglobulin E-set VM_17340 IPR020879 N-acetylglucosamine-binding protein A VM_17360 IPR003423 Outer membrane efflux protein VM_17365 IPR006143 RND efflux pump, membrane fusion protein VM_17365 IPR021647 Copper binding periplasmic protein CusF VM_17365 IPR032317 VM_17365 VM_17370 IPR001036 Acriflavin resistance protein VM_17370 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA VM_17370 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VM_17375 IPR008972 Cupredoxin VM_17380 IPR025997 Periplasmic binding protein domain VM_17380 IPR028082 Periplasmic binding protein-like I VM_17385 IPR001851 ABC transporter, permease VM_17390 IPR003439 ABC transporter-like VM_17390 IPR003593 AAA+ ATPase domain VM_17390 IPR017871 ABC transporter, conserved site VM_17390 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_17395 IPR001670 Alcohol dehydrogenase, iron-type VM_17395 IPR013460 Lactaldehyde reductase VM_17395 IPR018211 Alcohol dehydrogenase, iron-type, conserved site VM_17400 IPR001303 Class II aldolase/adducin N-terminal VM_17400 IPR004782 L-fucose phosphate aldolase VM_17400 IPR036409 VM_17400 VM_17405 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU VM_17405 IPR023750 RbsD-like domain VM_17410 IPR000577 VM_17410 VM_17410 IPR013450 L-fuculokinase VM_17410 IPR018483 Carbohydrate kinase, FGGY, conserved site VM_17410 IPR018484 Carbohydrate kinase, FGGY, N-terminal VM_17410 IPR018485 Carbohydrate kinase, FGGY, C-terminal VM_17415 IPR004216 L-fucose/L-arabinose isomerase, C-terminal VM_17415 IPR005763 L-fucose isomerase VM_17415 IPR009015 L-fucose isomerase, N-terminal/central domain VM_17415 IPR012888 L-fucose isomerase, N-terminal-1 VM_17415 IPR012889 L-fucose isomerase, N-terminal-2 VM_17415 IPR015888 L-fucose isomerase, C-terminal VM_17415 IPR038391 VM_17415 VM_17415 IPR038392 VM_17415 VM_17415 IPR038393 VM_17415 VM_17420 IPR001034 HTH DeoR N-terminal domain VM_17420 IPR014036 DeoR C-terminal sensor domain VM_17420 IPR018356 Transcription regulator, HTH DeoR-type, conserved site VM_17420 IPR036388 VM_17420 VM_17420 IPR036390 VM_17420 VM_17420 IPR037171 VM_17420 VM_17425 IPR036866 VM_17425 VM_17430 IPR001034 HTH DeoR N-terminal domain VM_17430 IPR014036 DeoR C-terminal sensor domain VM_17430 IPR018356 Transcription regulator, HTH DeoR-type, conserved site VM_17430 IPR036388 VM_17430 VM_17430 IPR036390 VM_17430 VM_17430 IPR037171 VM_17430 VM_17435 IPR003501 Phosphotransferase system, EIIB component, type 2/3 VM_17435 IPR004703 Phosphotransferase system, sugar-specific permease component VM_17435 IPR017180 Phosphotransferase system component IIBC, sugar-specific, predicted VM_17435 IPR036095 VM_17435 VM_17440 IPR002178 PTS EIIA type-2 domain VM_17440 IPR016152 Phosphotransferase/anion transporter VM_17445 IPR001303 Class II aldolase/adducin N-terminal VM_17445 IPR036409 VM_17445 VM_17450 IPR000150 Cof protein VM_17450 IPR006379 HAD-superfamily hydrolase, subfamily IIB VM_17450 IPR023214 HAD-like domain VM_17450 IPR036412 VM_17450 VM_17455 IPR001754 Orotidine 5'-phosphate decarboxylase domain VM_17455 IPR011060 Ribulose-phosphate binding barrel VM_17455 IPR013785 Aldolase-type TIM barrel VM_17460 IPR004560 L-ribulose-5-phosphate 3-epimerase VM_17460 IPR013022 Xylose isomerase-like, TIM barrel domain VM_17460 IPR036237 VM_17460 VM_17470 IPR003807 Domain of unknown function DUF202 VM_17475 IPR003807 Domain of unknown function DUF202 VM_17480 IPR000281 Helix-turn-helix protein RpiR VM_17480 IPR001347 Sugar isomerase (SIS) VM_17480 IPR009057 Homeodomain-like VM_17480 IPR036388 VM_17480 VM_17485 IPR003352 Phosphotransferase system, EIIC VM_17485 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site VM_17485 IPR036878 VM_17485 VM_17490 IPR001347 Sugar isomerase (SIS) VM_17490 IPR005486 Glucokinase regulatory protein, conserved site VM_17490 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ VM_17500 IPR008254 Flavodoxin/nitric oxide synthase VM_17500 IPR029039 Flavoprotein-like VM_17515 IPR000847 Transcription regulator HTH, LysR VM_17515 IPR005119 LysR, substrate-binding VM_17515 IPR036388 VM_17515 VM_17515 IPR036390 VM_17515 VM_17520 IPR039444 VM_17520 VM_17525 IPR002789 Domain of unknown function DUF87 VM_17525 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_17530 IPR000890 Aliphatic acid kinase, short-chain VM_17530 IPR004372 Acetate/Proprionate kinase VM_17530 IPR023865 Aliphatic acid kinase, short-chain, conserved site VM_17535 IPR014543 Uncharacterised conserved protein UCP028291 VM_17540 IPR000531 TonB-dependent receptor, beta-barrel VM_17540 IPR010105 TonB-dependent siderophore receptor VM_17540 IPR010917 TonB-dependent receptor, conserved site VM_17540 IPR012910 TonB-dependent receptor, plug VM_17540 IPR036942 VM_17540 VM_17540 IPR037066 VM_17540 VM_17545 IPR009057 Homeodomain-like VM_17545 IPR018060 DNA binding HTH domain, AraC-type VM_17545 IPR018062 HTH domain AraC-type, conserved site VM_17550 IPR003439 ABC transporter-like VM_17550 IPR003593 AAA+ ATPase domain VM_17550 IPR017871 ABC transporter, conserved site VM_17550 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_17555 IPR000522 ABC transporter, permease protein VM_17555 IPR037294 VM_17555 VM_17560 IPR000522 ABC transporter, permease protein VM_17560 IPR037294 VM_17560 VM_17565 IPR002491 ABC transporter periplasmic binding domain VM_17570 IPR026869 Putative glutamine amidotransferase type 2 VM_17570 IPR029055 Nucleophile aminohydrolases, N-terminal VM_17580 IPR000601 PKD domain VM_17580 IPR008757 Peptidase M6-like, domain VM_17580 IPR012300 Peptidase M6, InhA VM_17580 IPR013783 Immunoglobulin-like fold VM_17580 IPR022409 PKD/Chitinase domain VM_17580 IPR035986 VM_17580 VM_17585 IPR003660 HAMP linker domain VM_17585 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_17585 IPR004090 Chemotaxis methyl-accepting receptor VM_17585 IPR024478 4HB MCP domain VM_17590 IPR000772 Ricin B lectin domain VM_17590 IPR016183 Leukocidin/porin VM_17590 IPR022220 Hemolytic toxin, N-terminal VM_17590 IPR032496 VM_17590 VM_17590 IPR035992 VM_17590 VM_17590 IPR036404 VM_17590 VM_17590 IPR036435 VM_17590 VM_17595 IPR001087 Lipase, GDSL VM_17595 IPR008265 Lipase, GDSL, active site VM_17595 IPR036514 VM_17595 VM_17600 IPR000160 GGDEF domain VM_17600 IPR029787 Nucleotide cyclase VM_17610 IPR011701 Major facilitator superfamily VM_17610 IPR036259 VM_17610 VM_17615 IPR018461 Na+/H+ antiporter, NhaC-like VM_17625 IPR003594 Histidine kinase-like ATPase, C-terminal domain VM_17625 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_17625 IPR033414 VM_17625 VM_17625 IPR035965 VM_17625 VM_17625 IPR036097 VM_17625 VM_17625 IPR036890 VM_17625 VM_17630 IPR001789 Signal transduction response regulator, receiver domain VM_17630 IPR003607 HD/PDEase domain VM_17630 IPR006674 HD domain VM_17630 IPR011006 CheY-like superfamily VM_17630 IPR021800 Domain of unknown function DUF3369 VM_17635 IPR003660 HAMP linker domain VM_17635 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_17635 IPR013587 Nitrate/nitrite sensing protein VM_17640 IPR004821 Cytidyltransferase-like domain VM_17640 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_17645 IPR003694 NAD(+) synthetase VM_17645 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_17645 IPR022310 NAD/GMP synthase VM_17645 IPR022926 NH(3)-dependent NAD(+) synthetase VM_17650 IPR004668 Anaerobic c4-dicarboxylate membrane transporter VM_17655 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site VM_17655 IPR001650 Helicase, C-terminal VM_17655 IPR011545 DEAD/DEAH box helicase domain VM_17655 IPR014001 Helicase, superfamily 1/2, ATP-binding domain VM_17655 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_17655 IPR028622 ATP-dependent RNA helicase RhlE VM_17660 IPR002686 Transposase IS200-like VM_17660 IPR036515 VM_17660 VM_17670 IPR001347 Sugar isomerase (SIS) VM_17675 IPR001347 Sugar isomerase (SIS) VM_17680 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component VM_17685 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit VM_17690 IPR004720 Phosphotransferase system, sorbose subfamily IIB component VM_17690 IPR036667 VM_17690 VM_17705 IPR013785 Aldolase-type TIM barrel VM_17705 IPR017853 Glycoside hydrolase, superfamily VM_17710 IPR000322 Glycoside hydrolase, family 31 VM_17710 IPR011013 Galactose mutarotase-like domain VM_17710 IPR013780 Glycosyl hydrolase, family 13, all-beta VM_17710 IPR017853 Glycoside hydrolase, superfamily VM_17710 IPR032513 VM_17710 VM_17710 IPR033403 VM_17710 VM_17715 IPR000917 Sulfatase VM_17715 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha VM_17715 IPR017850 Alkaline-phosphatase-like, core domain VM_17715 IPR024607 Sulfatase, conserved site VM_17725 IPR006626 Parallel beta-helix repeat VM_17725 IPR011050 Pectin lyase fold/virulence factor VM_17725 IPR012334 Pectin lyase fold VM_17725 IPR039448 VM_17725 VM_17730 IPR003313 AraC-type arabinose-binding/dimerisation domain VM_17730 IPR009057 Homeodomain-like VM_17730 IPR014710 RmlC-like jelly roll fold VM_17730 IPR018060 DNA binding HTH domain, AraC-type VM_17730 IPR020449 Transcription regulator HTH, AraC- type VM_17730 IPR037923 VM_17730 VM_17735 IPR016624 Uncharacterised conserved protein UCP014753 VM_17740 IPR018389 Bacterial extracellular solute-binding protein, family 7 VM_17740 IPR038404 VM_17740 VM_17745 IPR004681 TRAP transporter permease protein VM_17745 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component VM_17745 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VM_17750 IPR008928 Six-hairpin glycosidase-like VM_17750 IPR010905 Glycosyl hydrolase, family 88 VM_17750 IPR012341 Six-hairpin glycosidase VM_17755 IPR000524 Transcription regulator HTH, GntR VM_17755 IPR011663 UbiC transcription regulator-associated VM_17755 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain VM_17755 IPR036388 VM_17755 VM_17755 IPR036390 VM_17755 VM_17760 IPR001347 Sugar isomerase (SIS) VM_17765 IPR004703 Phosphotransferase system, sugar-specific permease component VM_17775 IPR003501 Phosphotransferase system, EIIB component, type 2/3 VM_17775 IPR036095 VM_17775 VM_17780 IPR002178 PTS EIIA type-2 domain VM_17780 IPR016152 Phosphotransferase/anion transporter VM_17785 IPR003785 Creatininase/formamide hydrolase VM_17785 IPR024087 Creatininase-like domain VM_17790 IPR001559 Aryldialkylphosphatase VM_17790 IPR032466 VM_17790 VM_17800 IPR001093 IMP dehydrogenase/GMP reductase VM_17800 IPR005993 Guanosine monophosphate reductase 1 VM_17800 IPR013785 Aldolase-type TIM barrel VM_17800 IPR015875 IMP dehydrogenase / GMP reductase, conserved site VM_17805 IPR000498 Outer membrane protein, OmpA-like, transmembrane domain VM_17805 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel VM_17810 IPR013099 Two pore domain potassium channel domain VM_17810 IPR028325 Voltage-gated potassium channel VM_17815 IPR018461 Na+/H+ antiporter, NhaC-like VM_17820 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VM_17820 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain VM_17820 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 VM_17820 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VM_17820 IPR036291 VM_17820 VM_17825 IPR000631 YjeF C-terminal domain VM_17825 IPR004443 YjeF N-terminal domain VM_17825 IPR017953 Carbohydrate kinase, predicted, conserved site VM_17825 IPR029056 Ribokinase-like VM_17825 IPR030677 VM_17825 VM_17825 IPR036652 VM_17825 VM_17830 IPR000014 PAS domain VM_17830 IPR013767 PAS fold VM_17830 IPR035965 VM_17830 VM_17835 IPR001789 Signal transduction response regulator, receiver domain VM_17835 IPR011006 CheY-like superfamily VM_17835 IPR028976 CheC-like domain VM_17850 IPR005589 Protein of unknown function DUF331 VM_17855 IPR002059 Cold-shock protein, DNA-binding VM_17855 IPR011129 Cold shock protein VM_17855 IPR012156 Cold shock, CspA VM_17855 IPR012340 Nucleic acid-binding, OB-fold VM_17855 IPR019844 Cold-shock conserved site VM_17860 IPR000971 Globin VM_17860 IPR001221 Phenol hydroxylase reductase VM_17860 IPR001433 Oxidoreductase FAD/NAD(P)-binding VM_17860 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase VM_17860 IPR008333 Oxidoreductase, FAD-binding domain VM_17860 IPR009050 Globin-like VM_17860 IPR012292 Globin, structural domain VM_17860 IPR017938 Riboflavin synthase-like beta-barrel VM_17860 IPR023950 Flavohemoprotein VM_17860 IPR039261 VM_17860 VM_17865 IPR002078 RNA polymerase sigma factor 54 interaction domain VM_17865 IPR003018 GAF domain VM_17865 IPR003593 AAA+ ATPase domain VM_17865 IPR009057 Homeodomain-like VM_17865 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VM_17865 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VM_17865 IPR025944 Sigma-54 interaction domain, conserved site VM_17865 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_17865 IPR029016 GAF domain-like VM_17870 IPR006685 Mechanosensitive ion channel MscS VM_17870 IPR010920 Like-Sm (LSM) domain VM_17875 IPR003201 Transposase Tn5, dimerisation VM_17875 IPR012337 Ribonuclease H-like domain VM_17875 IPR014735 Transposase, Tn5-like, N-terminal VM_17875 IPR014736 Transposase, Tn5-like, core VM_17875 IPR014737 Transposase, Tn5-like, C-terminal VM_17875 IPR038215 VM_17875 VM_17880 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site VM_17880 IPR002933 Peptidase M20 VM_17880 IPR010161 Peptidase M20B, tripeptide aminopeptidase VM_17880 IPR011650 Peptidase M20, dimerisation domain VM_17880 IPR036264 VM_17880 VM_17885 IPR002668 Concentrative nucleoside transporter N-terminal domain VM_17885 IPR011642 Nucleoside recognition Gate VM_17885 IPR011657 Concentrative nucleoside transporter C-terminal domain VM_17885 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial VM_17890 IPR001853 DSBA-like thioredoxin domain VM_17890 IPR036249 VM_17890 VM_17900 IPR003660 HAMP linker domain VM_17900 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_17900 IPR004090 Chemotaxis methyl-accepting receptor VM_17905 IPR011703 ATPase, AAA-3 VM_17905 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_17910 IPR002881 Domain of unknown function DUF58 VM_17910 IPR036465 VM_17910 VM_17915 IPR025489 Protein of unknown function (DUF4381 VM_17920 IPR002035 von Willebrand factor, type A VM_17920 IPR036465 VM_17920 VM_17925 IPR002035 von Willebrand factor, type A VM_17925 IPR011990 Tetratricopeptide-like helical domain VM_17925 IPR019734 Tetratricopeptide repeat VM_17925 IPR036465 VM_17925 VM_17930 IPR025738 Aerotolerance-related protein BatD VM_17935 IPR007497 Protein of unknown function DUF541 VM_17935 IPR016907 Uncharacterised conserved protein UCP029033, periplasmic protein VM_17940 IPR002059 Cold-shock protein, DNA-binding VM_17940 IPR011129 Cold shock protein VM_17940 IPR012156 Cold shock, CspA VM_17940 IPR012340 Nucleic acid-binding, OB-fold VM_17940 IPR019844 Cold-shock conserved site VM_17945 IPR000160 GGDEF domain VM_17945 IPR029016 GAF domain-like VM_17945 IPR029787 Nucleotide cyclase VM_17950 IPR005490 L,D-transpeptidase catalytic domain VM_17950 IPR038063 VM_17950 VM_17955 IPR024530 Protein of unknown function DUF3820 VM_17965 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase VM_17965 IPR011166 Beta-eliminating lyase family VM_17965 IPR013440 Tryptophanase VM_17965 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VM_17965 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VM_17965 IPR015424 Pyridoxal phosphate-dependent transferase VM_17965 IPR018176 Tryptophanase, conserved site VM_17970 IPR013059 Tryptophan/tyrosine transporter VM_17970 IPR018227 Tryptophan/tyrosine permease VM_17975 IPR003439 ABC transporter-like VM_17975 IPR003593 AAA+ ATPase domain VM_17975 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_17980 IPR001221 Phenol hydroxylase reductase VM_17980 IPR013112 FAD-binding 8 VM_17980 IPR013130 Ferric reductase transmembrane component-like domain VM_17980 IPR017938 Riboflavin synthase-like beta-barrel VM_17980 IPR039261 VM_17980 VM_17985 IPR000843 Transcription regulator HTH, LacI VM_17985 IPR010982 Lambda repressor-like, DNA-binding domain VM_17985 IPR028082 Periplasmic binding protein-like I VM_17990 IPR002178 PTS EIIA type-2 domain VM_17990 IPR016152 Phosphotransferase/anion transporter VM_17995 IPR003501 Phosphotransferase system, EIIB component, type 2/3 VM_17995 IPR036095 VM_17995 VM_18000 IPR004703 Phosphotransferase system, sugar-specific permease component VM_18005 IPR023635 Peptide deformylase VM_18005 IPR036821 VM_18005 VM_18010 IPR013783 Immunoglobulin-like fold VM_18010 IPR019503 Peptidase M66 VM_18010 IPR022218 ToxR activated gene A lipoprotein VM_18015 IPR006076 FAD dependent oxidoreductase VM_18015 IPR036188 VM_18015 VM_18020 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VM_18020 IPR011853 TRAP transporter, 4TM/12TM fusion protein VM_18025 IPR011852 TRAP transporter solute receptor, TAXI family VM_18035 IPR001789 Signal transduction response regulator, receiver domain VM_18035 IPR002078 RNA polymerase sigma factor 54 interaction domain VM_18035 IPR002197 DNA binding HTH domain, Fis-type VM_18035 IPR003593 AAA+ ATPase domain VM_18035 IPR009057 Homeodomain-like VM_18035 IPR011006 CheY-like superfamily VM_18035 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VM_18035 IPR025944 Sigma-54 interaction domain, conserved site VM_18035 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_18040 IPR000524 Transcription regulator HTH, GntR VM_18040 IPR004839 Aminotransferase, class I/classII VM_18040 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VM_18040 IPR015424 Pyridoxal phosphate-dependent transferase VM_18040 IPR036388 VM_18040 VM_18040 IPR036390 VM_18040 VM_18045 IPR003804 L-lactate permease VM_18050 IPR000014 PAS domain VM_18050 IPR003594 Histidine kinase-like ATPase, C-terminal domain VM_18050 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain VM_18050 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_18050 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) VM_18050 IPR029151 Periplasmic sensor domain-like VM_18050 IPR035965 VM_18050 VM_18050 IPR036097 VM_18050 VM_18050 IPR036890 VM_18050 VM_18055 IPR003610 Carbohydrate-binding module family 5/12 VM_18055 IPR004302 Chitin-binding, domain 3 VM_18055 IPR014756 Immunoglobulin E-set VM_18055 IPR036573 VM_18055 VM_18060 IPR016879 Uncharacterised conserved protein UCP028299 VM_18065 IPR000849 Sugar phosphate transporter VM_18065 IPR005267 Glycerol-3-phosphate transporter VM_18065 IPR011701 Major facilitator superfamily VM_18065 IPR021159 Glycerate/sugar phosphate transporter, conserved site VM_18065 IPR036259 VM_18065 VM_18070 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain VM_18070 IPR030395 VM_18070 VM_18075 IPR000595 Cyclic nucleotide-binding domain VM_18075 IPR018490 Cyclic nucleotide-binding-like VM_18080 IPR000845 Nucleoside phosphorylase domain VM_18080 IPR035994 VM_18080 VM_18085 IPR006419 Nicotinamide mononucleotide transporter PnuC VM_18090 IPR000843 Transcription regulator HTH, LacI VM_18090 IPR010982 Lambda repressor-like, DNA-binding domain VM_18090 IPR028082 Periplasmic binding protein-like I VM_18095 IPR002139 Ribokinase VM_18095 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site VM_18095 IPR011611 Carbohydrate kinase PfkB VM_18095 IPR011877 Ribokinase, bacterial VM_18095 IPR029056 Ribokinase-like VM_18100 IPR025997 Periplasmic binding protein domain VM_18100 IPR028082 Periplasmic binding protein-like I VM_18105 IPR001851 ABC transporter, permease VM_18110 IPR003439 ABC transporter-like VM_18110 IPR003593 AAA+ ATPase domain VM_18110 IPR017871 ABC transporter, conserved site VM_18110 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_18115 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU VM_18115 IPR023064 D-ribose pyranase VM_18115 IPR023750 RbsD-like domain VM_18125 IPR021379 Protein of unknown function DUF3012 VM_18140 IPR002477 Peptidoglycan binding-like VM_18140 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein VM_18140 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset VM_18140 IPR023346 Lysozyme-like domain VM_18140 IPR036365 VM_18140 VM_18140 IPR036366 VM_18140 VM_18140 IPR037026 VM_18140 VM_18150 IPR010657 ImpA, N-terminal VM_18155 IPR009612 ImcF-related VM_18155 IPR010623 Domain of unknown function DUF1215 VM_18155 IPR017731 Type VI secretion system, IcmF VM_18155 IPR025743 ImcF-related, N-terminal domain VM_18155 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_18160 IPR010657 ImpA, N-terminal VM_18160 IPR017739 Type VI secretion system-associated, VCA0119 VM_18165 IPR017738 Type VI secretion system-associated, VCA0118 VM_18170 IPR002078 RNA polymerase sigma factor 54 interaction domain VM_18170 IPR002197 DNA binding HTH domain, Fis-type VM_18170 IPR003593 AAA+ ATPase domain VM_18170 IPR009057 Homeodomain-like VM_18170 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VM_18170 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VM_18170 IPR025944 Sigma-54 interaction domain, conserved site VM_18170 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_18175 IPR001270 ClpA/B family VM_18175 IPR003593 AAA+ ATPase domain VM_18175 IPR003959 ATPase, AAA-type, core VM_18175 IPR004176 Clp, N-terminal VM_18175 IPR017729 Type VI secretion system, ATPase ClpV1 VM_18175 IPR018368 ClpA/B, conserved site 1 VM_18175 IPR019489 Clp ATPase, C-terminal VM_18175 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_18175 IPR028299 ClpA/B, conserved site 2 VM_18175 IPR036628 VM_18175 VM_18180 IPR017732 Type IV / VI secretion system, DotU VM_18180 IPR038522 VM_18180 VM_18185 IPR010263 Protein of unknown function DUF876 VM_18190 IPR017734 Type VI secretion system, lipoprotein SciN VM_18190 IPR038706 VM_18190 VM_18195 IPR000253 Forkhead-associated (FHA) domain VM_18195 IPR008984 SMAD/FHA domain VM_18195 IPR017735 Type VI secretion system, FHA domain-containing protein VM_18200 IPR010732 Protein of unknown function DUF1305 VM_18205 IPR010272 Type VI secretion system, VCA0110 VM_18210 IPR007048 GpW/Gp25/anti-adapter protein IraD VM_18210 IPR017737 Type VI secretion system, lysozyme-related protein VM_18220 IPR008312 Uncharacterised conserved protein UCP028301 VM_18225 IPR011990 Tetratricopeptide-like helical domain VM_18230 IPR008727 PAAR motif VM_18235 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F VM_18235 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site VM_18235 IPR020103 Pseudouridine synthase, catalytic domain VM_18240 IPR002645 STAS domain VM_18240 IPR011547 Sulphate transporter VM_18240 IPR036513 VM_18240 VM_18245 IPR006439 HAD hydrolase, subfamily IA VM_18245 IPR023198 Phosphoglycolate phosphatase, domain 2 VM_18245 IPR023214 HAD-like domain VM_18245 IPR036412 VM_18245 VM_18250 IPR001633 EAL domain VM_18250 IPR035919 VM_18250 VM_18255 IPR001763 Rhodanese-like domain VM_18255 IPR036873 VM_18255 VM_18260 IPR000683 Oxidoreductase, N-terminal VM_18260 IPR004104 Oxidoreductase, C-terminal VM_18260 IPR036291 VM_18260 VM_18265 IPR006406 Nicotinate phosphoribosyltransferase VM_18265 IPR007229 Nicotinate phosphoribosyltransferase family VM_18265 IPR036068 VM_18265 VM_18270 IPR015797 NUDIX hydrolase domain-like VM_18275 IPR002884 Proprotein convertase, P VM_18275 IPR008979 Galactose-binding domain-like VM_18275 IPR024079 Metallopeptidase, catalytic domain VM_18285 IPR002577 Helix-turn-helix, HxlR type VM_18285 IPR036388 VM_18285 VM_18285 IPR036390 VM_18285 VM_18290 IPR029058 Alpha/Beta hydrolase fold VM_18295 IPR002852 Uncharacterised protein family UPF0251 VM_18300 IPR003848 Domain of unknown function DUF218 VM_18300 IPR011990 Tetratricopeptide-like helical domain VM_18305 IPR000620 Drug/metabolite transporter VM_18310 IPR001991 Sodium:dicarboxylate symporter VM_18310 IPR036458 VM_18310 VM_18315 IPR011642 Nucleoside recognition Gate VM_18320 IPR011642 Nucleoside recognition Gate VM_18325 IPR004680 Citrate transporter-like domain VM_18330 IPR001789 Signal transduction response regulator, receiver domain VM_18330 IPR011006 CheY-like superfamily VM_18330 IPR024187 Signal transduction response regulator, citrate/malate metabolism VM_18335 IPR003594 Histidine kinase-like ATPase, C-terminal domain VM_18335 IPR029151 Periplasmic sensor domain-like VM_18335 IPR033463 VM_18335 VM_18335 IPR036890 VM_18335 VM_18335 IPR039506 VM_18335 VM_18340 IPR001898 Sodium/sulphate symporter VM_18340 IPR030676 VM_18340 VM_18350 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site VM_18350 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain VM_18350 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding VM_18350 IPR023546 Methylated-DNA--protein-cysteine methyltransferase VM_18350 IPR036217 VM_18350 VM_18350 IPR036388 VM_18350 VM_18350 IPR036631 VM_18350 VM_18355 IPR004026 Ada DNA repair, metal-binding VM_18355 IPR009057 Homeodomain-like VM_18355 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal VM_18355 IPR011257 DNA glycosylase VM_18355 IPR018060 DNA binding HTH domain, AraC-type VM_18355 IPR018062 HTH domain AraC-type, conserved site VM_18355 IPR035451 VM_18355 VM_18355 IPR037046 VM_18355 VM_18360 IPR032808 VM_18360 VM_18365 IPR000847 Transcription regulator HTH, LysR VM_18365 IPR005119 LysR, substrate-binding VM_18365 IPR036388 VM_18365 VM_18365 IPR036390 VM_18365 VM_18370 IPR007335 Protein of unknown function DUF413 VM_18375 IPR007709 N-formylglutamate amidohydrolase VM_18375 IPR012548 Protein of unknown function DUF1704 VM_18375 IPR012656 Conserved hypothetical protein CHP02421, QEGLA VM_18380 IPR021432 Protein of unknown function DUF3081 VM_18385 IPR004547 Glucosamine-6-phosphate isomerase VM_18385 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase VM_18385 IPR018321 Glucosamine-6-phosphate isomerase, conserved site VM_18385 IPR037171 VM_18385 VM_18390 IPR006597 Sel1-like VM_18390 IPR011990 Tetratricopeptide-like helical domain VM_18395 IPR010794 Maltose operon periplasmic VM_18400 IPR003192 Porin, LamB type VM_18400 IPR036998 VM_18400 VM_18405 IPR004193 Glycoside hydrolase, family 13, N-terminal VM_18405 IPR006047 Glycosyl hydrolase, family 13, catalytic domain VM_18405 IPR011837 Glycogen debranching enzyme, GlgX type VM_18405 IPR013780 Glycosyl hydrolase, family 13, all-beta VM_18405 IPR013783 Immunoglobulin-like fold VM_18405 IPR014756 Immunoglobulin E-set VM_18405 IPR017853 Glycoside hydrolase, superfamily VM_18410 IPR001046 NRAMP family VM_18415 IPR021376 Protein of unknown function DUF2999 VM_18420 IPR003660 HAMP linker domain VM_18420 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_18420 IPR004090 Chemotaxis methyl-accepting receptor VM_18420 IPR024478 4HB MCP domain VM_18425 IPR006059 Bacterial extracellular solute-binding, family 1 VM_18425 IPR006061 Bacterial extracellular solute-binding family 1, conserved site VM_18430 IPR003660 HAMP linker domain VM_18430 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_18430 IPR024478 4HB MCP domain VM_18435 IPR021724 Protein of unknown function DUF3297 VM_18440 IPR007339 Protein of unknown function DUF417 VM_18440 IPR016865 Uncharacterised conserved protein UCP028065, membrane VM_18445 IPR002109 Glutaredoxin VM_18445 IPR011767 Glutaredoxin active site VM_18445 IPR011900 Glutaredoxin, GrxC VM_18445 IPR014025 Glutaredoxin subgroup VM_18445 IPR036249 VM_18445 VM_18450 IPR009057 Homeodomain-like VM_18450 IPR018060 DNA binding HTH domain, AraC-type VM_18450 IPR018062 HTH domain AraC-type, conserved site VM_18450 IPR020449 Transcription regulator HTH, AraC- type VM_18450 IPR032783 VM_18450 VM_18450 IPR037923 VM_18450 VM_18460 IPR000620 Drug/metabolite transporter VM_18470 IPR001123 Lysine-type exporter protein (LYSE/YGGA) VM_18475 IPR009000 Translation protein, beta-barrel domain VM_18475 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain VM_18475 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal VM_18480 IPR005123 Oxoglutarate/iron-dependent dioxygenase VM_18485 IPR000847 Transcription regulator HTH, LysR VM_18485 IPR005119 LysR, substrate-binding VM_18485 IPR036388 VM_18485 VM_18485 IPR036390 VM_18485 VM_18490 IPR001088 Glycoside hydrolase, family 4 VM_18490 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal VM_18490 IPR019802 Glycoside hydrolase, family 4, conserved site VM_18490 IPR022616 Glycosyl hydrolase, family 4, C-terminal VM_18490 IPR036291 VM_18490 VM_18500 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site VM_18500 IPR001650 Helicase, C-terminal VM_18500 IPR011545 DEAD/DEAH box helicase domain VM_18500 IPR014001 Helicase, superfamily 1/2, ATP-binding domain VM_18500 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_18505 IPR004628 Mannonate dehydratase VM_18505 IPR036237 VM_18505 VM_18510 IPR000524 Transcription regulator HTH, GntR VM_18510 IPR008920 Transcription regulator FadR/GntR, C-terminal VM_18510 IPR011711 GntR, C-terminal VM_18510 IPR036388 VM_18510 VM_18510 IPR036390 VM_18510 VM_18515 IPR004682 TRAP dicarboxylate transporter VM_18515 IPR018389 Bacterial extracellular solute-binding protein, family 7 VM_18515 IPR038404 VM_18515 VM_18520 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component VM_18525 IPR004681 TRAP transporter permease protein VM_18525 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VM_18530 IPR000669 Mannitol dehydrogenase VM_18530 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like VM_18530 IPR013118 Mannitol dehydrogenase, C-terminal VM_18530 IPR013131 Mannitol dehydrogenase, N-terminal VM_18530 IPR013328 Dehydrogenase, multihelical VM_18530 IPR023027 Mannitol dehydrogenase, conserved site VM_18530 IPR036291 VM_18530 VM_18535 IPR003766 Uronate isomerase VM_18535 IPR032466 VM_18535 VM_18540 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site VM_18540 IPR011611 Carbohydrate kinase PfkB VM_18540 IPR029056 Ribokinase-like VM_18545 IPR000887 KDPG/KHG aldolase VM_18545 IPR013785 Aldolase-type TIM barrel VM_18545 IPR031337 VM_18545 VM_18545 IPR031338 VM_18545 VM_18550 IPR019629 Uncharacterised protein family HI1736/YgjV VM_18550 IPR026267 Inner membrane protein YgjV VM_18555 IPR000847 Transcription regulator HTH, LysR VM_18555 IPR005119 LysR, substrate-binding VM_18555 IPR036388 VM_18555 VM_18555 IPR036390 VM_18555 VM_18560 IPR004045 Glutathione S-transferase, N-terminal VM_18560 IPR007494 Glutaredoxin 2, C-terminal VM_18560 IPR011901 Glutaredoxin, GrxB VM_18560 IPR036249 VM_18560 VM_18560 IPR036282 VM_18560 VM_18565 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal VM_18565 IPR013785 Aldolase-type TIM barrel VM_18570 IPR013559 YheO-like VM_18570 IPR039445 VM_18570 VM_18575 IPR005130 Serine dehydratase-like, alpha subunit VM_18575 IPR021144 Uncharacterised protein family UPF0597 VM_18580 IPR006056 Enamine/imine deaminase YjgF-like VM_18580 IPR006175 YjgF/Yer057p/UK114 family VM_18580 IPR035959 VM_18580 VM_18585 IPR018227 Tryptophan/tyrosine permease VM_18590 IPR014541 Predicted amidinotransferase, FN0238 type VM_18595 IPR003439 ABC transporter-like VM_18595 IPR003593 AAA+ ATPase domain VM_18595 IPR011527 ABC transporter type 1, transmembrane domain VM_18595 IPR017871 ABC transporter, conserved site VM_18595 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_18595 IPR036640 VM_18595 VM_18600 IPR007383 Protein of unknown function DUF445 VM_18605 IPR001123 Lysine-type exporter protein (LYSE/YGGA) VM_18610 IPR003313 AraC-type arabinose-binding/dimerisation domain VM_18610 IPR009057 Homeodomain-like VM_18610 IPR018060 DNA binding HTH domain, AraC-type VM_18610 IPR018062 HTH domain AraC-type, conserved site VM_18610 IPR037923 VM_18610 VM_18615 IPR011606 Branched-chain amino acid transport, permease VM_18620 IPR008407 Branched-chain amino acid transport, AzlD VM_18625 IPR011234 Fumarylacetoacetase, C-terminal-related VM_18625 IPR036663 VM_18625 VM_18630 IPR000835 MarR-type HTH domain VM_18630 IPR036388 VM_18630 VM_18630 IPR036390 VM_18630 VM_18635 IPR003718 OsmC/Ohr family VM_18635 IPR015946 K homology domain-like, alpha/beta VM_18635 IPR019953 Organic hydroperoxide resistance protein famiy VM_18635 IPR036102 VM_18635 VM_18640 IPR023614 Porin domain VM_18645 IPR000620 Drug/metabolite transporter VM_18650 IPR002109 Glutaredoxin VM_18650 IPR011767 Glutaredoxin active site VM_18650 IPR014025 Glutaredoxin subgroup VM_18650 IPR036249 VM_18650 VM_18665 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit VM_18665 IPR029045 ClpP/crotonase-like domain VM_18665 IPR034733 VM_18665 VM_18670 IPR000847 Transcription regulator HTH, LysR VM_18670 IPR005119 LysR, substrate-binding VM_18670 IPR036388 VM_18670 VM_18670 IPR036390 VM_18670 VM_18675 IPR003445 Cation transporter VM_18675 IPR004772 Potassium uptake protein TrkH family VM_18680 IPR003148 Regulator of K+ conductance, N-terminal VM_18680 IPR036291 VM_18680 VM_18680 IPR036721 VM_18680 VM_18685 IPR001789 Signal transduction response regulator, receiver domain VM_18685 IPR001867 Signal transduction response regulator, C-terminal VM_18685 IPR011006 CheY-like superfamily VM_18685 IPR016032 Signal transduction response regulator, C-terminal effector VM_18685 IPR036388 VM_18685 VM_18690 IPR003594 Histidine kinase-like ATPase, C-terminal domain VM_18690 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain VM_18690 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_18690 IPR025201 Sensor protein KdpD, transmembrane domain VM_18690 IPR036097 VM_18690 VM_18690 IPR036890 VM_18690 VM_18690 IPR038318 VM_18690 VM_18695 IPR036259 VM_18695 VM_18700 IPR000551 MerR-type HTH domain VM_18700 IPR009061 DNA binding domain, putative VM_18700 IPR010211 Redox-sensitive transcriptional activator SoxR VM_18705 IPR011701 Major facilitator superfamily VM_18705 IPR036259 VM_18705 VM_18710 IPR000847 Transcription regulator HTH, LysR VM_18710 IPR005119 LysR, substrate-binding VM_18710 IPR036388 VM_18710 VM_18710 IPR036390 VM_18710 VM_18715 IPR000160 GGDEF domain VM_18715 IPR001633 EAL domain VM_18715 IPR029787 Nucleotide cyclase VM_18715 IPR035919 VM_18715 VM_18720 IPR007340 Opacity-associated protein A VM_18720 IPR011055 Duplicated hybrid motif VM_18720 IPR016047 Peptidase M23 VM_18725 IPR013783 Immunoglobulin-like fold VM_18725 IPR014756 Immunoglobulin E-set VM_18730 IPR002645 STAS domain VM_18730 IPR011547 Sulphate transporter VM_18730 IPR036513 VM_18730 VM_18735 IPR011642 Nucleoside recognition Gate VM_18740 IPR000572 Oxidoreductase, molybdopterin-binding domain VM_18740 IPR036374 VM_18740 VM_18745 IPR000160 GGDEF domain VM_18745 IPR029787 Nucleotide cyclase VM_18750 IPR003439 ABC transporter-like VM_18750 IPR003593 AAA+ ATPase domain VM_18750 IPR005670 Phosphate transport system permease protein 1 VM_18750 IPR017871 ABC transporter, conserved site VM_18750 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_18755 IPR000515 MetI-like domain VM_18755 IPR005672 Phosphate transport system permease protein PstA VM_18755 IPR035906 VM_18755 VM_18760 IPR000515 MetI-like domain VM_18760 IPR011864 Phosphate ABC transporter, permease protein PstC VM_18760 IPR035906 VM_18760 VM_18765 IPR011862 Phosphate binding protein VM_18765 IPR024370 PBP domain VM_18770 IPR003660 HAMP linker domain VM_18770 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_18770 IPR004090 Chemotaxis methyl-accepting receptor VM_18775 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site VM_18775 IPR001650 Helicase, C-terminal VM_18775 IPR011545 DEAD/DEAH box helicase domain VM_18775 IPR014001 Helicase, superfamily 1/2, ATP-binding domain VM_18775 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_18780 IPR006817 Lipoprotein leucine-zipper VM_18780 IPR016367 Murein-lipoprotein VM_18785 IPR005490 L,D-transpeptidase catalytic domain VM_18785 IPR018392 LysM domain VM_18785 IPR038063 VM_18785 VM_18790 IPR002081 Cryptochrome/DNA photolyase, class 1 VM_18790 IPR005101 DNA photolyase, FAD-binding/Cryptochrome, C-terminal VM_18790 IPR006050 DNA photolyase, N-terminal VM_18790 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_18790 IPR018394 Cryptochrome/DNA photolyase, class 1 conserved site, C-terminal VM_18790 IPR036134 VM_18790 VM_18790 IPR036155 VM_18790 VM_18795 IPR000551 MerR-type HTH domain VM_18795 IPR009061 DNA binding domain, putative VM_18800 IPR007553 Domain of unknown function DUF523 VM_18800 IPR013560 Domain of unknown function DUF1722 VM_18800 IPR017087 Uncharacterised conserved protein UCP037004 VM_18810 IPR000845 Nucleoside phosphorylase domain VM_18810 IPR004402 Purine nucleoside phosphorylase DeoD-type VM_18810 IPR018016 Nucleoside phosphorylase, conserved site VM_18810 IPR035994 VM_18810 VM_18820 IPR011990 Tetratricopeptide-like helical domain VM_18820 IPR019734 Tetratricopeptide repeat VM_18830 IPR011223 Uncharacterised conserved protein UCP028770 VM_18835 IPR039562 VM_18835 VM_18840 IPR005151 Tail specific protease VM_18840 IPR011042 Six-bladed beta-propeller, TolB-like VM_18840 IPR011659 WD40-like Beta Propeller VM_18840 IPR012393 Tricorn protease VM_18840 IPR028204 Tricorn protease C1 domain VM_18840 IPR029045 ClpP/crotonase-like domain VM_18840 IPR036034 VM_18840 VM_18845 IPR021354 Protein of unknown function DUF2975 VM_18850 IPR001387 Cro/C1-type helix-turn-helix domain VM_18850 IPR010982 Lambda repressor-like, DNA-binding domain VM_18855 IPR016181 Acyl-CoA N-acyltransferase VM_18855 IPR031165 VM_18855 VM_18860 IPR009875 PilZ domain VM_18860 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal VM_18860 IPR012349 FMN-binding split barrel VM_18865 IPR004445 Sodium/glutamate symporter VM_18870 IPR007163 Protein of unknown function DUF368 VM_18880 IPR003782 Copper chaperone SCO1/SenC VM_18880 IPR036249 VM_18880 VM_18885 IPR007410 DR1885-like metal-binding protein VM_18885 IPR036182 VM_18885 VM_18890 IPR001991 Sodium:dicarboxylate symporter VM_18890 IPR023025 Serine/threonine transporter SstT VM_18890 IPR036458 VM_18890 VM_18895 IPR003137 Protease-associated domain, PA VM_18895 IPR007484 Peptidase M28 VM_18900 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VM_18900 IPR036938 VM_18900 VM_18905 IPR013976 Metal-dependent hydrolase HDOD VM_18910 IPR008557 Protein of unknown function DUF839 VM_18915 IPR023696 Ureohydrolase domain VM_18920 IPR005471 Transcription regulator IclR, N-terminal VM_18920 IPR014757 Transcription regulator IclR, C-terminal VM_18920 IPR029016 GAF domain-like VM_18920 IPR036388 VM_18920 VM_18920 IPR036390 VM_18920 VM_18925 IPR001223 Glycoside hydrolase, family 18, catalytic domain VM_18925 IPR001579 Glycoside hydrolase, chitinase active site VM_18925 IPR002859 PKD/REJ-like protein VM_18925 IPR003610 Carbohydrate-binding module family 5/12 VM_18925 IPR011583 Chitinase II VM_18925 IPR013540 Chitinase A N-terminal VM_18925 IPR013783 Immunoglobulin-like fold VM_18925 IPR014756 Immunoglobulin E-set VM_18925 IPR017853 Glycoside hydrolase, superfamily VM_18925 IPR022409 PKD/Chitinase domain VM_18925 IPR029070 Chitinase insertion domain VM_18925 IPR035986 VM_18925 VM_18925 IPR036573 VM_18925 VM_18930 IPR018635 Uncharacterised protein family UPF0319 VM_18935 IPR001898 Sodium/sulphate symporter VM_18935 IPR031312 VM_18935 VM_18940 IPR004776 Auxin efflux carrier VM_18945 IPR002656 Acyltransferase 3 VM_18950 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein VM_18950 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain VM_18965 IPR025391 Domain of unknown function DUF4123 VM_18970 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein VM_18970 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset VM_18970 IPR037026 VM_18970 VM_18975 IPR008514 Type VI secretion system effector, Hcp VM_18975 IPR036624 VM_18975 VM_18980 IPR004193 Glycoside hydrolase, family 13, N-terminal VM_18980 IPR006047 Glycosyl hydrolase, family 13, catalytic domain VM_18980 IPR006048 Alpha-amylase, C-terminal all beta VM_18980 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB VM_18980 IPR013780 Glycosyl hydrolase, family 13, all-beta VM_18980 IPR013783 Immunoglobulin-like fold VM_18980 IPR014756 Immunoglobulin E-set VM_18980 IPR017853 Glycoside hydrolase, superfamily VM_18980 IPR037439 VM_18980 VM_18985 IPR003385 Glycoside hydrolase, family 77 VM_18985 IPR017853 Glycoside hydrolase, superfamily VM_18990 IPR000811 Glycosyl transferase, family 35 VM_18990 IPR011833 Glycogen/starch/alpha-glucan phosphorylase VM_18990 IPR035090 VM_18990 VM_18995 IPR000792 Transcription regulator LuxR, C-terminal VM_18995 IPR011990 Tetratricopeptide-like helical domain VM_18995 IPR016032 Signal transduction response regulator, C-terminal effector VM_18995 IPR023768 Transcriptional regulator HTH-type, MalT VM_18995 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_18995 IPR036388 VM_18995 VM_19000 IPR021230 Protein of unknown function DUF2810 VM_19005 IPR003660 HAMP linker domain VM_19005 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_19005 IPR004090 Chemotaxis methyl-accepting receptor VM_19005 IPR033480 VM_19005 VM_19010 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site VM_19010 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding VM_19010 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like VM_19010 IPR013328 Dehydrogenase, multihelical VM_19010 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type VM_19010 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain VM_19010 IPR036291 VM_19010 VM_19015 IPR002876 Transcriptional regulator TACO1-like VM_19015 IPR017856 Integrase, N-terminal zinc-binding domain-like VM_19015 IPR026564 Transcriptional regulator TACO1-like, domain 3 VM_19015 IPR029072 YebC-like VM_19020 IPR021700 Protein of unknown function DUF3283 VM_19035 IPR021781 Protein of unknown function DUF3346 VM_19045 IPR025669 AAA domain VM_19045 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_19050 IPR003115 ParB/Sulfiredoxin VM_19050 IPR004437 ParB/RepB/Spo0J partition protein family VM_19050 IPR036086 VM_19050 VM_19055 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein VM_19055 IPR006059 Bacterial extracellular solute-binding, family 1 VM_19060 IPR000182 GNAT domain VM_19060 IPR007807 Helicase domain VM_19060 IPR013562 Domain of unknown function DUF1726 VM_19060 IPR016181 Acyl-CoA N-acyltransferase VM_19060 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA VM_19060 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_19065 IPR022050 Thermostable hemolysin VM_19070 IPR000873 AMP-dependent synthetase/ligase VM_19070 IPR020845 AMP-binding, conserved site VM_19075 IPR016084 Haem oxygenase-like, multi-helical VM_19080 IPR002347 Glucose/ribitol dehydrogenase VM_19080 IPR020904 Short-chain dehydrogenase/reductase, conserved site VM_19080 IPR036291 VM_19080 VM_19085 IPR011990 Tetratricopeptide-like helical domain VM_19090 IPR001789 Signal transduction response regulator, receiver domain VM_19090 IPR001867 Signal transduction response regulator, C-terminal VM_19090 IPR011006 CheY-like superfamily VM_19090 IPR016032 Signal transduction response regulator, C-terminal effector VM_19090 IPR036388 VM_19090 VM_19095 IPR003594 Histidine kinase-like ATPase, C-terminal domain VM_19095 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain VM_19095 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_19095 IPR013727 Two-component sensor kinase N-terminal VM_19095 IPR036097 VM_19095 VM_19095 IPR036890 VM_19095 VM_19100 IPR000917 Sulfatase VM_19100 IPR012549 Domain of unknown function DUF1705 VM_19100 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha VM_19100 IPR017850 Alkaline-phosphatase-like, core domain VM_19105 IPR003439 ABC transporter-like VM_19105 IPR003593 AAA+ ATPase domain VM_19105 IPR017871 ABC transporter, conserved site VM_19105 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_19110 IPR000515 MetI-like domain VM_19110 IPR035906 VM_19110 VM_19115 IPR000515 MetI-like domain VM_19115 IPR035906 VM_19115 VM_19120 IPR000914 Bacterial extracellular solute-binding protein, family 5 VM_19120 IPR030678 VM_19120 VM_19125 IPR002645 STAS domain VM_19125 IPR036513 VM_19125 VM_19130 IPR001789 Signal transduction response regulator, receiver domain VM_19130 IPR011006 CheY-like superfamily VM_19135 IPR002545 CheW-like protein VM_19135 IPR003594 Histidine kinase-like ATPase, C-terminal domain VM_19135 IPR004105 Histidine kinase CheA-like, homodimeric domain VM_19135 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_19135 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain VM_19135 IPR036061 VM_19135 VM_19135 IPR036097 VM_19135 VM_19135 IPR036641 VM_19135 VM_19135 IPR036890 VM_19135 VM_19135 IPR037006 VM_19135 VM_19140 IPR002545 CheW-like protein VM_19140 IPR036061 VM_19140 VM_19145 IPR002545 CheW-like protein VM_19145 IPR036061 VM_19145 VM_19150 IPR000014 PAS domain VM_19150 IPR003660 HAMP linker domain VM_19150 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_19150 IPR004090 Chemotaxis methyl-accepting receptor VM_19155 IPR000780 MCP methyltransferase, CheR-type VM_19155 IPR022641 MCP methyltransferase, CheR-type, all-alpha domain, N-terminal VM_19155 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal VM_19155 IPR026024 Chemotaxis protein methyltransferase CheR VM_19155 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VM_19155 IPR036804 VM_19155 VM_19160 IPR005659 Chemoreceptor glutamine deamidase CheD VM_19160 IPR011324 Cytotoxic necrotizing factor-like, catalytic VM_19160 IPR038592 VM_19160 VM_19165 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase VM_19165 IPR001789 Signal transduction response regulator, receiver domain VM_19165 IPR008248 Signal transduction response regulator, chemotaxis, CheB VM_19165 IPR011006 CheY-like superfamily VM_19165 IPR035909 VM_19165 VM_19170 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_19170 IPR004090 Chemotaxis methyl-accepting receptor VM_19175 IPR002645 STAS domain VM_19175 IPR036513 VM_19175 VM_19180 IPR001789 Signal transduction response regulator, receiver domain VM_19180 IPR001932 Protein phosphatase 2C (PP2C)-like domain VM_19180 IPR003594 Histidine kinase-like ATPase, C-terminal domain VM_19180 IPR011006 CheY-like superfamily VM_19180 IPR036457 VM_19180 VM_19180 IPR036890 VM_19180 VM_19185 IPR005646 Protein of unknown function DUF342 VM_19185 IPR036145 VM_19185 VM_19190 IPR003439 ABC transporter-like VM_19190 IPR003593 AAA+ ATPase domain VM_19190 IPR011527 ABC transporter type 1, transmembrane domain VM_19190 IPR017750 ATPase, type I secretion system VM_19190 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_19190 IPR036640 VM_19190 VM_19195 IPR000160 GGDEF domain VM_19195 IPR001633 EAL domain VM_19195 IPR029787 Nucleotide cyclase VM_19195 IPR032244 VM_19195 VM_19195 IPR035919 VM_19195 VM_19200 IPR010319 Transglutaminase-like cysteine peptidase, predicted VM_19205 IPR003997 RTX secretion protein D, Gram-negative bacteria VM_19205 IPR006144 Secretion protein HlyD, conserved site VM_19205 IPR010129 Type I secretion membrane fusion protein, HlyD VM_19205 IPR039562 VM_19205 VM_19210 IPR000659 Pyridoxamine 5'-phosphate oxidase VM_19210 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain VM_19210 IPR012349 FMN-binding split barrel VM_19210 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal VM_19210 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site VM_19215 IPR000792 Transcription regulator LuxR, C-terminal VM_19215 IPR013656 PAS fold-4 VM_19215 IPR016032 Signal transduction response regulator, C-terminal effector VM_19215 IPR035965 VM_19215 VM_19215 IPR036388 VM_19215 VM_19220 IPR005532 Formylglycine-generating sulphatase enzyme domain VM_19220 IPR013229 PEGA VM_19220 IPR016187 C-type lectin fold VM_19225 IPR013229 PEGA VM_19230 IPR003313 AraC-type arabinose-binding/dimerisation domain VM_19230 IPR009057 Homeodomain-like VM_19230 IPR018060 DNA binding HTH domain, AraC-type VM_19230 IPR018062 HTH domain AraC-type, conserved site VM_19230 IPR020449 Transcription regulator HTH, AraC- type VM_19235 IPR002872 Proline dehydrogenase domain VM_19235 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 VM_19235 IPR015590 Aldehyde dehydrogenase domain VM_19235 IPR016160 Aldehyde dehydrogenase, cysteine active site VM_19235 IPR016161 Aldehyde/histidinol dehydrogenase VM_19235 IPR016162 Aldehyde dehydrogenase, N-terminal VM_19235 IPR016163 Aldehyde dehydrogenase, C-terminal VM_19235 IPR024082 Proline dehydrogenase PutA, domain II VM_19235 IPR024089 Proline dehydrogenase PutA, domain I/II VM_19235 IPR025703 Bifunctional protein PutA VM_19235 IPR029041 FAD-linked oxidoreductase-like VM_19240 IPR016161 Aldehyde/histidinol dehydrogenase VM_19240 IPR016162 Aldehyde dehydrogenase, N-terminal VM_19245 IPR001734 Sodium/solute symporter VM_19245 IPR011851 Sodium/proline symporter VM_19245 IPR018212 Sodium/solute symporter, conserved site VM_19245 IPR038377 VM_19245 VM_19255 IPR003660 HAMP linker domain VM_19255 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_19255 IPR029151 Periplasmic sensor domain-like VM_19255 IPR033479 VM_19255 VM_19260 IPR000485 AsnC-type HTH domain VM_19260 IPR011008 Dimeric alpha-beta barrel VM_19260 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VM_19260 IPR019887 Transcription regulator AsnC-type, C-terminal VM_19260 IPR019888 Transcription regulator AsnC-type VM_19260 IPR036388 VM_19260 VM_19260 IPR036390 VM_19260 VM_19265 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent VM_19265 IPR015590 Aldehyde dehydrogenase domain VM_19265 IPR016161 Aldehyde/histidinol dehydrogenase VM_19265 IPR016162 Aldehyde dehydrogenase, N-terminal VM_19265 IPR016163 Aldehyde dehydrogenase, C-terminal VM_19265 IPR029510 Aldehyde dehydrogenase, glutamic acid active site VM_19275 IPR033399 VM_19275 VM_19280 IPR008799 Pseudomonas avirulence D VM_19285 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_19285 IPR038727 VM_19285 VM_19290 IPR004869 Membrane transport protein, MMPL domain VM_19295 IPR000792 Transcription regulator LuxR, C-terminal VM_19295 IPR016032 Signal transduction response regulator, C-terminal effector VM_19295 IPR036388 VM_19295 VM_19300 IPR000310 Orn/Lys/Arg decarboxylase, major domain VM_19300 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal VM_19300 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal VM_19300 IPR011006 CheY-like superfamily VM_19300 IPR011193 Ornithine/lysine/arginine decarboxylase VM_19300 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VM_19300 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VM_19300 IPR015424 Pyridoxal phosphate-dependent transferase VM_19300 IPR027464 Ornithine decarboxylase, N-terminal domain VM_19300 IPR027568 Ornithine decarboxylase SpeF VM_19300 IPR036633 VM_19300 VM_19305 IPR002293 Amino acid/polyamine transporter I VM_19305 IPR004754 Amino acid antiporter VM_19305 IPR027566 Putrescine-ornithine antiporter VM_19310 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB VM_19310 IPR017945 DHBP synthase RibB-like alpha/beta domain VM_19320 IPR007158 tRNA (pseudouridine(54)-N(1))-methyltransferase, TrmY VM_19320 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VM_19320 IPR029028 Alpha/beta knot methyltransferases VM_19325 IPR002305 Aminoacyl-tRNA synthetase, class Ic VM_19325 IPR002306 Tryptophan-tRNA ligase VM_19325 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VM_19330 IPR000847 Transcription regulator HTH, LysR VM_19330 IPR005119 LysR, substrate-binding VM_19330 IPR036388 VM_19330 VM_19330 IPR036390 VM_19330 VM_19335 IPR002347 Glucose/ribitol dehydrogenase VM_19335 IPR020904 Short-chain dehydrogenase/reductase, conserved site VM_19335 IPR036291 VM_19335 VM_19340 IPR003660 HAMP linker domain VM_19340 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_19340 IPR033479 VM_19340 VM_19345 IPR000847 Transcription regulator HTH, LysR VM_19345 IPR005119 LysR, substrate-binding VM_19345 IPR036388 VM_19345 VM_19345 IPR036390 VM_19345 VM_19350 IPR016040 NAD(P)-binding domain VM_19350 IPR036291 VM_19350 VM_19355 IPR000620 Drug/metabolite transporter VM_19360 IPR011032 GroES (chaperonin 10)-like VM_19360 IPR013154 Alcohol dehydrogenase GroES-like VM_19360 IPR020843 Polyketide synthase, enoylreductase VM_19360 IPR036291 VM_19360 VM_19365 IPR036249 VM_19365 VM_19370 IPR005025 NADPH-dependent FMN reductase-like VM_19370 IPR010089 Flavoprotein WrbA VM_19370 IPR029039 Flavoprotein-like VM_19370 IPR037513 VM_19370 VM_19375 IPR000847 Transcription regulator HTH, LysR VM_19375 IPR005119 LysR, substrate-binding VM_19375 IPR036388 VM_19375 VM_19375 IPR036390 VM_19375 VM_19380 IPR001763 Rhodanese-like domain VM_19380 IPR036873 VM_19380 VM_19385 IPR000835 MarR-type HTH domain VM_19385 IPR023187 Transcriptional regulator MarR-type, conserved site VM_19385 IPR036388 VM_19385 VM_19385 IPR036390 VM_19385 VM_19390 IPR000620 Drug/metabolite transporter VM_19395 IPR005025 NADPH-dependent FMN reductase-like VM_19395 IPR029039 Flavoprotein-like VM_19400 IPR002781 Transmembrane protein TauE like VM_19405 IPR005185 Protein of unknown function DUF307 VM_19405 IPR031308 VM_19405 VM_19415 IPR001279 Beta-lactamase-like VM_19415 IPR036866 VM_19415 VM_19420 IPR000683 Oxidoreductase, N-terminal VM_19420 IPR036291 VM_19420 VM_19425 IPR007761 Mannitol repressor VM_19425 IPR038026 VM_19425 VM_19430 IPR000669 Mannitol dehydrogenase VM_19430 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like VM_19430 IPR013118 Mannitol dehydrogenase, C-terminal VM_19430 IPR013131 Mannitol dehydrogenase, N-terminal VM_19430 IPR013328 Dehydrogenase, multihelical VM_19430 IPR023027 Mannitol dehydrogenase, conserved site VM_19430 IPR023028 Mannitol-1-phosphate 5-dehydrogenase VM_19430 IPR036291 VM_19430 VM_19435 IPR002178 PTS EIIA type-2 domain VM_19435 IPR003352 Phosphotransferase system, EIIC VM_19435 IPR003501 Phosphotransferase system, EIIB component, type 2/3 VM_19435 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC VM_19435 IPR016152 Phosphotransferase/anion transporter VM_19435 IPR036095 VM_19435 VM_19440 IPR011055 Duplicated hybrid motif VM_19440 IPR016047 Peptidase M23 VM_19445 IPR007607 Protein of unknown function DUF583 VM_19450 IPR005841 Alpha-D-phosphohexomutase superfamily VM_19450 IPR005843 Alpha-D-phosphohexomutase, C-terminal VM_19450 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I VM_19450 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II VM_19450 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III VM_19450 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III VM_19450 IPR016066 Alpha-D-phosphohexomutase, conserved site VM_19450 IPR036900 VM_19450 VM_19455 IPR000515 MetI-like domain VM_19455 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family VM_19455 IPR035906 VM_19455 VM_19460 IPR001638 Extracellular solute-binding protein, family 3 VM_19465 IPR000515 MetI-like domain VM_19465 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family VM_19465 IPR035906 VM_19465 VM_19470 IPR003439 ABC transporter-like VM_19470 IPR003593 AAA+ ATPase domain VM_19470 IPR017871 ABC transporter, conserved site VM_19470 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_19470 IPR030679 VM_19470 VM_19475 IPR006218 DAHP synthetase I/KDSA VM_19475 IPR006219 DHAP synthase, class 1 VM_19475 IPR013785 Aldolase-type TIM barrel VM_19480 IPR002528 Multi antimicrobial extrusion protein VM_19485 IPR000014 PAS domain VM_19485 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_19485 IPR013655 PAS fold-3 VM_19485 IPR035965 VM_19485 VM_19490 IPR000816 Peptidase C15, pyroglutamyl peptidase I VM_19490 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like VM_19490 IPR029762 Pyroglutamyl peptidase I, bacterial-type VM_19490 IPR033694 VM_19490 VM_19490 IPR036440 VM_19490 VM_19495 IPR002645 STAS domain VM_19495 IPR009050 Globin-like VM_19495 IPR012292 Globin, structural domain VM_19495 IPR036513 VM_19495 VM_19500 IPR036513 VM_19500 VM_19505 IPR003594 Histidine kinase-like ATPase, C-terminal domain VM_19505 IPR036890 VM_19505 VM_19510 IPR001932 Protein phosphatase 2C (PP2C)-like domain VM_19510 IPR036457 VM_19510 VM_19515 IPR000014 PAS domain VM_19515 IPR001789 Signal transduction response regulator, receiver domain VM_19515 IPR003594 Histidine kinase-like ATPase, C-terminal domain VM_19515 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain VM_19515 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_19515 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain VM_19515 IPR011006 CheY-like superfamily VM_19515 IPR013767 PAS fold VM_19515 IPR035965 VM_19515 VM_19515 IPR036097 VM_19515 VM_19515 IPR036641 VM_19515 VM_19515 IPR036890 VM_19515 VM_19520 IPR001789 Signal transduction response regulator, receiver domain VM_19520 IPR003607 HD/PDEase domain VM_19520 IPR011006 CheY-like superfamily VM_19525 IPR000121 PEP-utilising enzyme, C-terminal VM_19525 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding VM_19525 IPR006319 Phosphoenolpyruvate synthase VM_19525 IPR008279 PEP-utilising enzyme, mobile domain VM_19525 IPR013815 ATP-grasp fold, subdomain 1 VM_19525 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain VM_19525 IPR018274 PEP-utilising enzyme, active site VM_19525 IPR023151 PEP-utilising enzyme, conserved site VM_19525 IPR036637 VM_19525 VM_19530 IPR005177 Bifunctional kinase-pyrophosphorylase VM_19530 IPR026530 Phosphoenolpyruvate synthase regulatory protein VM_19535 IPR004017 Cysteine-rich domain VM_19535 IPR004113 FAD-linked oxidase, C-terminal VM_19535 IPR006094 FAD linked oxidase, N-terminal VM_19535 IPR009051 Alpha-helical ferredoxin VM_19535 IPR016164 FAD-linked oxidase-like, C-terminal VM_19535 IPR016167 FAD-binding, type 2, subdomain 1 VM_19535 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 VM_19535 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VM_19535 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VM_19535 IPR036318 VM_19535 VM_19540 IPR000262 FMN-dependent dehydrogenase VM_19540 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site VM_19540 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent VM_19540 IPR013785 Aldolase-type TIM barrel VM_19540 IPR020920 L-lactate dehydrogenase, bacterial VM_19545 IPR003804 L-lactate permease VM_19550 IPR000847 Transcription regulator HTH, LysR VM_19550 IPR005119 LysR, substrate-binding VM_19550 IPR036388 VM_19550 VM_19550 IPR036390 VM_19550 VM_19555 IPR003439 ABC transporter-like VM_19555 IPR003593 AAA+ ATPase domain VM_19555 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal VM_19555 IPR017871 ABC transporter, conserved site VM_19555 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_19565 IPR008269 Peptidase S16, Lon C-terminal VM_19565 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VM_19565 IPR020568 Ribosomal protein S5 domain 2-type fold VM_19565 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_19570 IPR003660 HAMP linker domain VM_19570 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_19570 IPR004090 Chemotaxis methyl-accepting receptor VM_19580 IPR005829 Sugar transporter, conserved site VM_19580 IPR011701 Major facilitator superfamily VM_19580 IPR036259 VM_19580 VM_19585 IPR021271 Protein of unknown function DUF2850 VM_19590 IPR009664 Protein of unknown function DUF1255 VM_19590 IPR011051 RmlC-like cupin domain VM_19590 IPR014710 RmlC-like jelly roll fold VM_19595 IPR003829 Pirin, N-terminal domain VM_19595 IPR008778 Pirin, C-terminal domain VM_19595 IPR011051 RmlC-like cupin domain VM_19595 IPR012093 Pirin VM_19595 IPR014710 RmlC-like jelly roll fold VM_19605 IPR000160 GGDEF domain VM_19605 IPR029787 Nucleotide cyclase VM_19610 IPR000847 Transcription regulator HTH, LysR VM_19610 IPR005119 LysR, substrate-binding VM_19610 IPR036388 VM_19610 VM_19610 IPR036390 VM_19610 VM_19615 IPR000620 Drug/metabolite transporter VM_19620 IPR021928 Protein of unknown function DUF3541 VM_19625 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like VM_19625 IPR037151 VM_19625 VM_19630 IPR000160 GGDEF domain VM_19630 IPR006189 CHASE VM_19630 IPR029787 Nucleotide cyclase VM_19635 IPR001387 Cro/C1-type helix-turn-helix domain VM_19635 IPR010982 Lambda repressor-like, DNA-binding domain VM_19635 IPR022055 Protein of unknown function DUF3612 VM_19640 IPR011076 Malate synthase-like VM_19640 IPR023310 Malate synthase G, beta sub-domain VM_19645 IPR000160 GGDEF domain VM_19645 IPR029787 Nucleotide cyclase VM_19650 IPR000835 MarR-type HTH domain VM_19650 IPR023187 Transcriptional regulator MarR-type, conserved site VM_19650 IPR036388 VM_19650 VM_19650 IPR036390 VM_19650 VM_19655 IPR001789 Signal transduction response regulator, receiver domain VM_19655 IPR002545 CheW-like protein VM_19655 IPR011006 CheY-like superfamily VM_19655 IPR024181 Chemotaxis response regulator CheV VM_19655 IPR036061 VM_19655 VM_19670 IPR029002 Phospholipase C/D VM_19675 IPR000847 Transcription regulator HTH, LysR VM_19675 IPR005119 LysR, substrate-binding VM_19675 IPR036388 VM_19675 VM_19675 IPR036390 VM_19675 VM_19680 IPR010621 Domain of unknown function DUF1214 VM_19680 IPR010679 Domain of unknown function DUF1254 VM_19680 IPR023289 VPA0735-like domain VM_19680 IPR037050 VM_19680 VM_19685 IPR000792 Transcription regulator LuxR, C-terminal VM_19685 IPR016032 Signal transduction response regulator, C-terminal effector VM_19690 IPR002765 Uncharacterised protein family UPF0145 VM_19690 IPR035439 VM_19690 VM_19695 IPR009971 Protein of unknown function DUF1496 VM_19700 IPR000189 Prokaryotic transglycosylase, active site VM_19700 IPR008258 Lytic transglycosylase-like SLT domain VM_19700 IPR023346 Lysozyme-like domain VM_19705 IPR007809 FlgN-like domain VM_19705 IPR036679 VM_19705 VM_19710 IPR007412 Anti-sigma-28 factor, FlgM VM_19710 IPR035890 VM_19710 VM_19715 IPR013974 SAF domain VM_19715 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal VM_19720 IPR001444 Flagellar basal body rod protein, N-terminal VM_19720 IPR006300 Flagellar basal-body rod protein FlgB VM_19720 IPR019776 Flagellar basal body rod protein, conserved site VM_19725 IPR001444 Flagellar basal body rod protein, N-terminal VM_19725 IPR006299 Flagellar basal-body rod protein FlgC VM_19725 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VM_19730 IPR005648 Flagellar hook capping protein VM_19730 IPR025963 FlgD Tudor-like domain VM_19730 IPR025965 FlgD Ig-like domain VM_19735 IPR001444 Flagellar basal body rod protein, N-terminal VM_19735 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VM_19735 IPR011491 Flagellar basal body FlaE VM_19735 IPR019776 Flagellar basal body rod protein, conserved site VM_19735 IPR020013 Fagellar hook-basal body protein, FlgE/F/G VM_19735 IPR037058 VM_19735 VM_19735 IPR037925 VM_19735 VM_19740 IPR001444 Flagellar basal body rod protein, N-terminal VM_19740 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VM_19740 IPR020013 Fagellar hook-basal body protein, FlgE/F/G VM_19740 IPR037925 VM_19740 VM_19745 IPR001444 Flagellar basal body rod protein, N-terminal VM_19745 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VM_19745 IPR012834 Flagellar basal-body rod FlgG VM_19745 IPR019776 Flagellar basal body rod protein, conserved site VM_19745 IPR020013 Fagellar hook-basal body protein, FlgE/F/G VM_19745 IPR037925 VM_19745 VM_19750 IPR000527 Flagellar L-ring protein VM_19755 IPR001782 Flagellar P-ring protein VM_19760 IPR019301 Flagellar protein FlgJ, N-terminal VM_19765 IPR001444 Flagellar basal body rod protein, N-terminal VM_19765 IPR002371 Flagellar hook-associated protein, FlgK VM_19765 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VM_19770 IPR001029 Flagellin, D0/D1 domain VM_19770 IPR013384 Flagellar hook-associated protein 3 VM_19785 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal VM_19785 IPR025713 Motility protein B, N-terminal domain VM_19785 IPR036737 VM_19785 VM_19790 IPR000540 Flagellar motor protein MotA, conserved site VM_19790 IPR002898 MotA/TolQ/ExbB proton channel VM_19790 IPR022522 Flagellar motor stator, MotA VM_19795 IPR000943 RNA polymerase sigma-70 VM_19795 IPR007627 RNA polymerase sigma-70 region 2 VM_19795 IPR007630 RNA polymerase sigma-70 region 4 VM_19795 IPR012845 RNA polymerase sigma factor, FliA/WhiG VM_19795 IPR013324 RNA polymerase sigma factor, region 3/4 VM_19795 IPR013325 RNA polymerase sigma factor, region 2 VM_19795 IPR014284 RNA polymerase sigma-70 like domain VM_19800 IPR005503 Flagellar basal body-associated protein FliL VM_19805 IPR021136 Flagellar hook-length control protein-like, C-terminal VM_19805 IPR038610 VM_19805 VM_19815 IPR003713 Flagellar protein FliS VM_19815 IPR036584 VM_19815 VM_19820 IPR003481 Flagellar hook-associated protein 2, N-terminal VM_19820 IPR010809 Flagellar hook-associated 2, C-terminal VM_19820 IPR010810 Flagellin hook, IN motif VM_19830 IPR001029 Flagellin, D0/D1 domain VM_19830 IPR001492 Flagellin VM_19835 IPR001712 Type III secretion system FHIPEP VM_19835 IPR025505 FHIPEP conserved site VM_19840 IPR006135 Type III secretion system substrate exporter VM_19840 IPR006136 Type III exporter system, flagellar biosynthetic protein FlhB VM_19840 IPR029025 Type III secretion system substrate exporter, C-terminal VM_19845 IPR002010 Type III secretion system inner membrane R protein VM_19845 IPR006303 Flagellar biosynthesis protein FliR VM_19850 IPR002191 Bacterial export protein family 3 VM_19850 IPR006305 Flagellar biosynthesis protein FliQ VM_19855 IPR005837 Flagellar transport protein FliP VM_19855 IPR005838 Type III secretion system inner membrane P protein VM_19860 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb VM_19860 IPR001543 Surface presentation of antigen (SpoA) VM_19860 IPR012826 Flagellar motor switch FliN VM_19860 IPR036429 VM_19860 VM_19865 IPR001543 Surface presentation of antigen (SpoA) VM_19865 IPR036429 VM_19865 VM_19870 IPR006664 Outer membrane protein, bacterial VM_19870 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal VM_19870 IPR036737 VM_19870 VM_19875 IPR002078 RNA polymerase sigma factor 54 interaction domain VM_19875 IPR002197 DNA binding HTH domain, Fis-type VM_19875 IPR003593 AAA+ ATPase domain VM_19875 IPR009057 Homeodomain-like VM_19875 IPR011006 CheY-like superfamily VM_19875 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VM_19875 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VM_19875 IPR025944 Sigma-54 interaction domain, conserved site VM_19875 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_19880 IPR001624 Flagellar hook-basal body complex protein FliE VM_19885 IPR000067 Flagellar M-ring protein FliF VM_19885 IPR006182 Secretory protein YscJ/FliF VM_19885 IPR013556 Flagellar M-ring C-terminal VM_19890 IPR000090 Flagellar motor switch protein FliG VM_19890 IPR011002 Flagellar motor switch protein FliG, alpha-helical VM_19890 IPR023087 VM_19890 VM_19890 IPR028263 Flagellar motor switch protein FliG, N-terminal domain VM_19890 IPR032779 VM_19890 VM_19895 IPR000563 Flagellar assembly protein FliH VM_19895 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE VM_19900 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain VM_19900 IPR005714 ATPase, type III secretion system, FliI/YscN VM_19900 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site VM_19900 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_19905 IPR012823 Flagellar export FliJ VM_19910 IPR001584 Integrase, catalytic core VM_19910 IPR009057 Homeodomain-like VM_19910 IPR012337 Ribonuclease H-like domain VM_19910 IPR036397 VM_19910 VM_19915 IPR000771 Ketose-bisphosphate aldolase, class-II VM_19915 IPR013785 Aldolase-type TIM barrel VM_19920 IPR002178 PTS EIIA type-2 domain VM_19920 IPR004715 Phosphotransferase system, IIA component fructose subfamily VM_19920 IPR016152 Phosphotransferase/anion transporter VM_19925 IPR003352 Phosphotransferase system, EIIC VM_19925 IPR003353 Phosphotransferase system, fructose-specific IIB subunit VM_19925 IPR003501 Phosphotransferase system, EIIB component, type 2/3 VM_19925 IPR006327 Phosphotransferase system, fructose IIC component VM_19925 IPR036095 VM_19925 VM_19930 IPR011611 Carbohydrate kinase PfkB VM_19930 IPR017583 Tagatose/fructose phosphokinase VM_19930 IPR029056 Ribokinase-like VM_19935 IPR001034 HTH DeoR N-terminal domain VM_19935 IPR014036 DeoR C-terminal sensor domain VM_19935 IPR018356 Transcription regulator, HTH DeoR-type, conserved site VM_19935 IPR036388 VM_19935 VM_19935 IPR036390 VM_19935 VM_19935 IPR037171 VM_19935 VM_19940 IPR005123 Oxoglutarate/iron-dependent dioxygenase VM_19940 IPR006620 Prolyl 4-hydroxylase, alpha subunit VM_19945 IPR009778 Modulator of Rho-dependent transcription termination VM_19945 IPR023534 Rof/RNase P-like VM_19945 IPR038626 VM_19945 VM_19950 IPR000182 GNAT domain VM_19950 IPR016181 Acyl-CoA N-acyltransferase VM_19955 IPR003439 ABC transporter-like VM_19955 IPR003593 AAA+ ATPase domain VM_19955 IPR008995 Molybdate/tungstate binding, C-terminal VM_19955 IPR013611 Transport-associated OB, type 2 VM_19955 IPR017871 ABC transporter, conserved site VM_19955 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_19960 IPR006059 Bacterial extracellular solute-binding, family 1 VM_19960 IPR006060 Maltose binding protein VM_19960 IPR006061 Bacterial extracellular solute-binding family 1, conserved site VM_19965 IPR000515 MetI-like domain VM_19965 IPR029345 Maltose transport system permease protein MalF, P2 domain VM_19965 IPR035277 VM_19965 VM_19965 IPR035906 VM_19965 VM_19970 IPR000515 MetI-like domain VM_19970 IPR035906 VM_19970 VM_19985 IPR004843 Calcineurin-like phosphoesterase domain, apaH type VM_19985 IPR006179 5'-Nucleotidase/apyrase VM_19985 IPR008334 5'-Nucleotidase, C-terminal VM_19985 IPR029052 Metallo-dependent phosphatase-like VM_19985 IPR036907 VM_19985 VM_19990 IPR006683 Thioesterase superfamily VM_19990 IPR029069 HotDog domain VM_19995 IPR001034 HTH DeoR N-terminal domain VM_19995 IPR014036 DeoR C-terminal sensor domain VM_19995 IPR018356 Transcription regulator, HTH DeoR-type, conserved site VM_19995 IPR036388 VM_19995 VM_19995 IPR036390 VM_19995 VM_19995 IPR037171 VM_19995 VM_20000 IPR000014 PAS domain VM_20000 IPR000160 GGDEF domain VM_20000 IPR013656 PAS fold-4 VM_20000 IPR029787 Nucleotide cyclase VM_20000 IPR035965 VM_20000 VM_20005 IPR000620 Drug/metabolite transporter VM_20010 IPR009057 Homeodomain-like VM_20010 IPR011051 RmlC-like cupin domain VM_20010 IPR018060 DNA binding HTH domain, AraC-type VM_20010 IPR020449 Transcription regulator HTH, AraC- type VM_20015 IPR007036 Succinylglutamate desuccinylase/aspartoacylase VM_20025 IPR002059 Cold-shock protein, DNA-binding VM_20025 IPR011129 Cold shock protein VM_20025 IPR012156 Cold shock, CspA VM_20025 IPR012340 Nucleic acid-binding, OB-fold VM_20030 IPR001958 Tetracycline resistance protein, TetA/multidrug resistance protein MdtG VM_20030 IPR011701 Major facilitator superfamily VM_20030 IPR036259 VM_20030 VM_20035 IPR003439 ABC transporter-like VM_20035 IPR003593 AAA+ ATPase domain VM_20035 IPR017871 ABC transporter, conserved site VM_20035 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_20035 IPR032781 VM_20035 VM_20040 IPR008526 Inner membrane protein YedI VM_20045 IPR010280 (Uracil-5)-methyltransferase family VM_20045 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC VM_20045 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VM_20045 IPR030390 VM_20045 VM_20055 IPR008523 Lactobacillus phage LBR48, DUF805 VM_20060 IPR009057 Homeodomain-like VM_20060 IPR018060 DNA binding HTH domain, AraC-type VM_20060 IPR020449 Transcription regulator HTH, AraC- type VM_20065 IPR002195 Dihydroorotase, conserved site VM_20065 IPR004721 Dihydroorotase homodimeric type VM_20065 IPR006680 Amidohydrolase 1 VM_20065 IPR032466 VM_20065 VM_20070 IPR001041 2Fe-2S ferredoxin-type domain VM_20070 IPR001433 Oxidoreductase FAD/NAD(P)-binding VM_20070 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase VM_20070 IPR001834 NADH:cytochrome b5 reductase (CBR) VM_20070 IPR005302 Molybdenum cofactor sulfurase, C-terminal VM_20070 IPR005303 MOSC, N-terminal beta barrel VM_20070 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site VM_20070 IPR008333 Oxidoreductase, FAD-binding domain VM_20070 IPR011037 Pyruvate kinase-like, insert domain VM_20070 IPR012675 Beta-grasp domain VM_20070 IPR017938 Riboflavin synthase-like beta-barrel VM_20070 IPR036010 VM_20070 VM_20070 IPR039261 VM_20070 VM_20075 IPR002559 Transposase, IS4-like VM_20075 IPR003201 Transposase Tn5, dimerisation VM_20075 IPR012337 Ribonuclease H-like domain VM_20075 IPR014735 Transposase, Tn5-like, N-terminal VM_20075 IPR014736 Transposase, Tn5-like, core VM_20075 IPR014737 Transposase, Tn5-like, C-terminal VM_20075 IPR038215 VM_20075 VM_20080 IPR003660 HAMP linker domain VM_20080 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_20080 IPR029151 Periplasmic sensor domain-like VM_20080 IPR033479 VM_20080 VM_20090 IPR002123 Phospholipid/glycerol acyltransferase VM_20095 IPR032675 VM_20095 VM_20100 IPR005272 Conserved hypothetical protein CHP00743 VM_20100 IPR035571 VM_20100 VM_20105 IPR001647 DNA-binding HTH domain, TetR-type VM_20105 IPR009057 Homeodomain-like VM_20110 IPR003439 ABC transporter-like VM_20110 IPR003593 AAA+ ATPase domain VM_20110 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_20115 IPR000522 ABC transporter, permease protein VM_20115 IPR037294 VM_20115 VM_20120 IPR002491 ABC transporter periplasmic binding domain VM_20125 IPR003400 Biopolymer transport protein ExbD/TolR VM_20130 IPR002898 MotA/TolQ/ExbB proton channel VM_20135 IPR003538 Gram-negative bacterial TonB protein VM_20135 IPR006260 TonB, C-terminal VM_20135 IPR037682 VM_20135 VM_20140 IPR006638 Elongator protein 3/MiaB/NifB VM_20140 IPR007197 Radical SAM VM_20140 IPR023404 Radical SAM, alpha/beta horseshoe VM_20140 IPR026332 Putative heme utilization radical SAM enzyme HutW VM_20145 IPR010413 Heme utilization carrier protein HutX like VM_20150 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain VM_20150 IPR012349 FMN-binding split barrel VM_20150 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain VM_20155 IPR003660 HAMP linker domain VM_20155 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_20160 IPR004852 Di-haem cytochrome c peroxidase VM_20160 IPR009056 Cytochrome c-like domain VM_20160 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase VM_20160 IPR036909 VM_20160 VM_20165 IPR008599 Putative sugar diacid recognition VM_20165 IPR009057 Homeodomain-like VM_20165 IPR025736 PucR C-terminal helix-turn-helix domain VM_20170 IPR003474 Gluconate transporter VM_20175 IPR004381 Glycerate kinase VM_20175 IPR018193 Glycerate kinase, flavodoxin-like domain VM_20175 IPR018197 Glycerate kinase, restriction-enzyme-like fold VM_20175 IPR036129 VM_20175 VM_20180 IPR016875 Uncharacterised conserved protein UCP028200 VM_20195 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating VM_20195 IPR006114 6-phosphogluconate dehydrogenase, C-terminal VM_20195 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding VM_20195 IPR006183 VM_20195 VM_20195 IPR006184 6-phosphogluconate-binding site VM_20195 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like VM_20195 IPR013328 Dehydrogenase, multihelical VM_20195 IPR036291 VM_20195 VM_20200 IPR005900 6-phosphogluconolactonase, DevB-type VM_20200 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase VM_20200 IPR037171 VM_20200 VM_20205 IPR001282 Glucose-6-phosphate dehydrogenase VM_20205 IPR019796 Glucose-6-phosphate dehydrogenase, active site VM_20205 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding VM_20205 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal VM_20205 IPR036291 VM_20205 VM_20210 IPR003141 Polymerase/histidinol phosphatase, N-terminal VM_20210 IPR016195 Polymerase/histidinol phosphatase-like VM_20210 IPR023710 Probable phosphatase YcdX VM_20215 IPR009155 Cytochrome b562 VM_20215 IPR010980 Cytochrome c/b562 VM_20220 IPR000014 PAS domain VM_20220 IPR001789 Signal transduction response regulator, receiver domain VM_20220 IPR003594 Histidine kinase-like ATPase, C-terminal domain VM_20220 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain VM_20220 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VM_20220 IPR006189 CHASE VM_20220 IPR011006 CheY-like superfamily VM_20220 IPR029151 Periplasmic sensor domain-like VM_20220 IPR035965 VM_20220 VM_20220 IPR036097 VM_20220 VM_20220 IPR036641 VM_20220 VM_20220 IPR036890 VM_20220 VM_20225 IPR000160 GGDEF domain VM_20225 IPR001789 Signal transduction response regulator, receiver domain VM_20225 IPR011006 CheY-like superfamily VM_20225 IPR029787 Nucleotide cyclase VM_20235 IPR005625 PepSY-associated TM helix VM_20240 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VM_20240 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VM_20245 IPR000847 Transcription regulator HTH, LysR VM_20245 IPR005119 LysR, substrate-binding VM_20245 IPR036388 VM_20245 VM_20245 IPR036390 VM_20245 VM_20250 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme VM_20250 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase VM_20250 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VM_20250 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VM_20250 IPR015424 Pyridoxal phosphate-dependent transferase VM_20255 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site VM_20255 IPR004839 Aminotransferase, class I/classII VM_20255 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase VM_20255 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VM_20255 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VM_20255 IPR015424 Pyridoxal phosphate-dependent transferase VM_20260 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site VM_20260 IPR004627 L-threonine 3-dehydrogenase VM_20260 IPR011032 GroES (chaperonin 10)-like VM_20260 IPR013149 Alcohol dehydrogenase, C-terminal VM_20260 IPR013154 Alcohol dehydrogenase GroES-like VM_20260 IPR020843 Polyketide synthase, enoylreductase VM_20260 IPR036291 VM_20260 VM_20265 IPR015004 Protein of unknown function DUF1852 VM_20270 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal VM_20270 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit VM_20270 IPR038071 VM_20270 VM_20280 IPR001584 Integrase, catalytic core VM_20280 IPR009057 Homeodomain-like VM_20280 IPR012337 Ribonuclease H-like domain VM_20280 IPR036397 VM_20280 VM_20290 IPR001845 HTH ArsR-type DNA-binding domain VM_20290 IPR018334 ArsR-type transcription regulator, HTH motif VM_20290 IPR036388 VM_20290 VM_20290 IPR036390 VM_20290 VM_20300 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal VM_20300 IPR012338 Beta-lactamase/transpeptidase-like VM_20300 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A VM_20310 IPR005618 Outer membrane protein, OmpW VM_20310 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel VM_20330 IPR006047 Glycosyl hydrolase, family 13, catalytic domain VM_20330 IPR014635 Alpha-amylase, MalS type VM_20330 IPR017853 Glycoside hydrolase, superfamily VM_20350 IPR003838 Permease FtsX-like VM_20350 IPR025857 MacB-like periplasmic core domain VM_20355 IPR011220 Uncharacterised conserved protein UCP028205 VM_20355 IPR029046 Lipoprotein localisation LolA/LolB/LppX VM_20355 IPR033399 VM_20355 VM_20365 IPR003594 Histidine kinase-like ATPase, C-terminal domain VM_20365 IPR010559 Signal transduction histidine kinase, internal region VM_20365 IPR036890 VM_20365 VM_20370 IPR001789 Signal transduction response regulator, receiver domain VM_20370 IPR007492 LytTR DNA-binding domain VM_20370 IPR011006 CheY-like superfamily VM_20380 IPR000160 GGDEF domain VM_20380 IPR029787 Nucleotide cyclase VM_20385 IPR002293 Amino acid/polyamine transporter I VM_20390 IPR001123 Lysine-type exporter protein (LYSE/YGGA) VM_20400 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I VM_20400 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain VM_20400 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain VM_20400 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site VM_20400 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family VM_20400 IPR036291 VM_20400 VM_20410 IPR002125 CMP/dCMP deaminase, zinc-binding VM_20410 IPR016192 APOBEC/CMP deaminase, zinc-binding VM_20410 IPR016193 Cytidine deaminase-like VM_20410 IPR016473 Deoxycytidylate deaminase VM_20415 IPR022604 Protein of unknown function DUF2955 VM_20420 IPR032317 VM_20420 VM_20420 IPR039562 VM_20420 VM_20430 IPR003718 OsmC/Ohr family VM_20430 IPR015946 K homology domain-like, alpha/beta VM_20430 IPR036102 VM_20430 VM_20435 IPR002550 Domain of unknown function DUF21 VM_20435 IPR005170 Transporter-associated domain VM_20435 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 VM_20435 IPR036318 VM_20435 VM_20440 IPR001451 Bacterial transferase hexapeptide repeat VM_20440 IPR011004 Trimeric LpxA-like VM_20440 IPR018357 Hexapeptide transferase, conserved site VM_20440 IPR024688 Maltose/galactoside acetyltransferase VM_20445 IPR000620 Drug/metabolite transporter VM_20450 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VM_20460 IPR000847 Transcription regulator HTH, LysR VM_20460 IPR005119 LysR, substrate-binding VM_20460 IPR036388 VM_20460 VM_20460 IPR036390 VM_20460 VM_20465 IPR000873 AMP-dependent synthetase/ligase VM_20465 IPR005914 Acetoacetyl-CoA synthase VM_20465 IPR020845 AMP-binding, conserved site VM_20465 IPR025110 AMP-binding enzyme C-terminal domain VM_20470 IPR005960 Phenylalanine-4-hydroxylase, monomeric form VM_20470 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site VM_20470 IPR019774 Aromatic amino acid hydroxylase, C-terminal VM_20470 IPR036329 VM_20470 VM_20470 IPR036951 VM_20470 VM_20475 IPR001533 Transcriptional coactivator/pterin dehydratase VM_20475 IPR036428 VM_20475 VM_20480 IPR000758 Virulence-related outer membrane protein VM_20480 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel VM_20480 IPR027385 Outer membrane protein beta-barrel VM_20485 IPR002528 Multi antimicrobial extrusion protein VM_20490 IPR003313 AraC-type arabinose-binding/dimerisation domain VM_20490 IPR009057 Homeodomain-like VM_20490 IPR018060 DNA binding HTH domain, AraC-type VM_20490 IPR018062 HTH domain AraC-type, conserved site VM_20490 IPR037923 VM_20490 VM_20495 IPR009057 Homeodomain-like VM_20495 IPR010499 Bacterial transcription activator, effector binding VM_20495 IPR011256 Regulatory factor, effector binding domain VM_20495 IPR018060 DNA binding HTH domain, AraC-type VM_20495 IPR018062 HTH domain AraC-type, conserved site VM_20495 IPR020449 Transcription regulator HTH, AraC- type VM_20495 IPR029442 GyrI-like small molecule binding domain VM_20500 IPR000182 GNAT domain VM_20500 IPR012772 L-2,4-diaminobutyric acid acetyltransferase VM_20500 IPR016181 Acyl-CoA N-acyltransferase VM_20505 IPR004637 2,4-diaminobutyrate 4-transaminase VM_20505 IPR005814 Aminotransferase class-III VM_20505 IPR012773 Ectoine biosynthetic protein VM_20505 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VM_20505 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VM_20505 IPR015424 Pyridoxal phosphate-dependent transferase VM_20510 IPR010462 Ectoine synthase VM_20510 IPR011051 RmlC-like cupin domain VM_20510 IPR014710 RmlC-like jelly roll fold VM_20515 IPR001048 Aspartate/glutamate/uridylate kinase VM_20515 IPR036393 VM_20515 VM_20520 IPR006667 SLC41 divalent cation transporters, integral membrane domain VM_20520 IPR006668 Magnesium transporter, MgtE intracellular domain VM_20520 IPR036739 VM_20520 VM_20520 IPR038048 VM_20520 VM_20525 IPR006685 Mechanosensitive ion channel MscS VM_20525 IPR010920 Like-Sm (LSM) domain VM_20530 IPR039562 VM_20530 VM_20540 IPR009057 Homeodomain-like VM_20540 IPR018060 DNA binding HTH domain, AraC-type VM_20540 IPR020449 Transcription regulator HTH, AraC- type VM_20540 IPR032687 VM_20540 VM_20545 IPR000183 Ornithine/DAP/Arg decarboxylase VM_20545 IPR002985 Arginine decarboxylase VM_20545 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal VM_20545 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal VM_20545 IPR029066 PLP-binding barrel VM_20550 IPR005925 Agmatinase-related VM_20550 IPR006035 Ureohydrolase VM_20550 IPR020855 Ureohydrolase, manganese-binding site VM_20550 IPR023696 Ureohydrolase domain VM_20560 IPR005318 Outer membrane porin, bacterial VM_20560 IPR023614 Porin domain VM_20565 IPR007045 5-keto 4-deoxyuronate isomerase VM_20565 IPR011051 RmlC-like cupin domain VM_20565 IPR014710 RmlC-like jelly roll fold VM_20565 IPR021120 KduI/IolB isomerase VM_20565 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal domain VM_20570 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site VM_20570 IPR011611 Carbohydrate kinase PfkB VM_20570 IPR029056 Ribokinase-like VM_20575 IPR000887 KDPG/KHG aldolase VM_20575 IPR013785 Aldolase-type TIM barrel VM_20575 IPR031337 VM_20575 VM_20575 IPR031338 VM_20575 VM_20580 IPR001937 Galactose-1-phosphate uridyl transferase, class I VM_20580 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal VM_20580 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal VM_20580 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site VM_20580 IPR036265 VM_20580 VM_20585 IPR002347 Glucose/ribitol dehydrogenase VM_20585 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase VM_20585 IPR020904 Short-chain dehydrogenase/reductase, conserved site VM_20585 IPR036291 VM_20585 VM_20590 IPR008928 Six-hairpin glycosidase-like VM_20590 IPR010905 Glycosyl hydrolase, family 88 VM_20590 IPR012341 Six-hairpin glycosidase VM_20595 IPR012711 Lacto-N-biose phosphorylase VM_20595 IPR013783 Immunoglobulin-like fold VM_20595 IPR029062 Class I glutamine amidotransferase-like VM_20595 IPR035080 VM_20595 VM_20595 IPR035356 VM_20595 VM_20595 IPR035363 VM_20595 VM_20600 IPR002686 Transposase IS200-like VM_20600 IPR036515 VM_20600 VM_20610 IPR000160 GGDEF domain VM_20610 IPR029016 GAF domain-like VM_20610 IPR029787 Nucleotide cyclase VM_20615 IPR000917 Sulfatase VM_20615 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha VM_20615 IPR017850 Alkaline-phosphatase-like, core domain VM_20615 IPR024607 Sulfatase, conserved site VM_20615 IPR032158 VM_20615 VM_20620 IPR000917 Sulfatase VM_20620 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha VM_20620 IPR017850 Alkaline-phosphatase-like, core domain VM_20625 IPR007197 Radical SAM VM_20625 IPR013785 Aldolase-type TIM barrel VM_20625 IPR023885 4Fe4S-binding SPASM domain VM_20630 IPR016624 Uncharacterised conserved protein UCP014753 VM_20635 IPR000914 Bacterial extracellular solute-binding protein, family 5 VM_20635 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site VM_20635 IPR030678 VM_20635 VM_20640 IPR000515 MetI-like domain VM_20640 IPR035906 VM_20640 VM_20645 IPR000515 MetI-like domain VM_20645 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VM_20645 IPR035906 VM_20645 VM_20650 IPR003439 ABC transporter-like VM_20650 IPR003593 AAA+ ATPase domain VM_20650 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal VM_20650 IPR017871 ABC transporter, conserved site VM_20650 IPR027417 P-loop containing nucleoside triphosphate hydrolase VM_20655 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VM_20660 IPR005471 Transcription regulator IclR, N-terminal VM_20660 IPR014757 Transcription regulator IclR, C-terminal VM_20660 IPR029016 GAF domain-like VM_20660 IPR036388 VM_20660 VM_20660 IPR036390 VM_20660 VM_20665 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal VM_20665 IPR012338 Beta-lactamase/transpeptidase-like VM_20665 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal VM_20665 IPR015956 Penicillin-binding protein-associated VM_20665 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A VM_20665 IPR037167 VM_20665 VM_20670 IPR010982 Lambda repressor-like, DNA-binding domain VM_20680 IPR001148 Alpha carbonic anhydrase VM_20680 IPR018338 Carbonic anhydrase, alpha-class, conserved site VM_20680 IPR036398 VM_20680 VM_20685 IPR008979 Galactose-binding domain-like VM_20685 IPR013830 VM_20685 VM_20685 IPR036514 VM_20685 VM_20690 IPR003437 Glycine cleavage system P protein, homodimeric VM_20690 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VM_20690 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VM_20690 IPR015424 Pyridoxal phosphate-dependent transferase VM_20690 IPR020581 Glycine cleavage system P protein VM_20695 IPR002930 Glycine cleavage system H-protein VM_20695 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site VM_20695 IPR011053 Single hybrid motif VM_20695 IPR017453 Glycine cleavage system H-protein, subgroup VM_20695 IPR033753 VM_20695 VM_20700 IPR001085 Serine hydroxymethyltransferase VM_20700 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VM_20700 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VM_20700 IPR015424 Pyridoxal phosphate-dependent transferase VM_20700 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site VM_20700 IPR039429 VM_20700 VM_20705 IPR001387 Cro/C1-type helix-turn-helix domain VM_20705 IPR010982 Lambda repressor-like, DNA-binding domain VM_20705 IPR011051 RmlC-like cupin domain VM_20705 IPR013096 Cupin 2, conserved barrel VM_20705 IPR014710 RmlC-like jelly roll fold VM_20710 IPR006222 Glycine cleavage T-protein, N-terminal VM_20710 IPR006223 Glycine cleavage system T protein VM_20710 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain VM_20710 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 VM_20710 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA VM_20710 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain VM_20715 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain VM_20715 IPR002320 Threonine-tRNA ligase, class IIa VM_20715 IPR004095 TGS VM_20715 IPR004154 Anticodon-binding VM_20715 IPR012675 Beta-grasp domain VM_20715 IPR012676 TGS-like VM_20715 IPR012947 Threonyl/alanyl tRNA synthetase, SAD VM_20715 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain VM_20715 IPR036621 VM_20715 VM_20720 IPR001288 Translation initiation factor 3 VM_20720 IPR019813 Translation initiation factor 3, conserved site VM_20720 IPR019814 Translation initiation factor 3, N-terminal VM_20720 IPR019815 Translation initiation factor 3, C-terminal VM_20720 IPR036787 VM_20720 VM_20720 IPR036788 VM_20720 VM_20725 IPR001706 Ribosomal protein L35, non-mitochondrial VM_20725 IPR018265 Ribosomal protein L35, conserved site VM_20725 IPR021137 Ribosomal protein L35 VM_20725 IPR037229 VM_20725 VM_20730 IPR005813 Ribosomal protein L20 VM_20730 IPR035566 VM_20730 VM_20735 IPR002104 Integrase, catalytic VM_20735 IPR004107 Integrase, SAM-like, N-terminal VM_20735 IPR010998 Integrase, Lambda-type, N-terminal VM_20735 IPR011010 DNA breaking-rejoining enzyme, catalytic core VM_20735 IPR011946 Integrase, integron-type VM_20735 IPR013762 Integrase-like, catalytic core VM_20740 IPR000182 GNAT domain VM_20740 IPR016181 Acyl-CoA N-acyltransferase VM_20745 IPR000182 GNAT domain VM_20745 IPR016181 Acyl-CoA N-acyltransferase VM_20765 IPR006959 Protein of unknown function DUF645 VM_20780 IPR003718 OsmC/Ohr family VM_20780 IPR015946 K homology domain-like, alpha/beta VM_20780 IPR036102 VM_20780 VM_20785 IPR002711 HNH endonuclease VM_20800 IPR000504 RNA recognition motif domain VM_20800 IPR012677 Nucleotide-binding, alpha-beta plait VM_20800 IPR035979 VM_20800