locus-tag class description KSS82_00065 PF13302 Acetyltransferase (GNAT) domain KSS82_00075 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH KSS82_00105 PF14602 Hexapeptide repeat of succinyl-transferase KSS82_00105 PF12464 Maltose acetyltransferase KSS82_00155 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB KSS82_00160 PF01381 Helix-turn-helix KSS82_00170 PF02567 Phenazine biosynthesis-like protein KSS82_00205 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KSS82_00370 PF01636 Phosphotransferase enzyme family KSS82_00390 PF08378 Nuclease-related domain KSS82_00415 PF01699 Sodium/calcium exchanger protein KSS82_00420 PF07969 Amidohydrolase family KSS82_00450 PF13597 Anaerobic ribonucleoside-triphosphate reductase KSS82_00450 PF03477 ATP cone domain KSS82_00460 PF00155 Aminotransferase class I and II KSS82_00465 PF08443 RimK-like ATP-grasp domain KSS82_00465 PF18030 RimK PreATP-grasp domain KSS82_00470 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KSS82_00470 PF02378 Phosphotransferase system, EIIC KSS82_00475 PF00294 pfkB family carbohydrate kinase KSS82_00480 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KSS82_00480 PF00381 PTS HPr component phosphorylation site KSS82_00485 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KSS82_00485 PF00356 Bacterial regulatory proteins, lacI family KSS82_00490 PF12320 Type 5 capsule protein repressor C-terminal domain KSS82_00490 PF00149 Calcineurin-like phosphoesterase KSS82_00495 PF13476 AAA domain KSS82_00500 PF00072 Response regulator receiver domain KSS82_00500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSS82_00505 PF00155 Aminotransferase class I and II KSS82_00515 PF00654 Voltage gated chloride channel KSS82_00520 PF02492 CobW/HypB/UreG, nucleotide-binding domain KSS82_00520 PF07683 Cobalamin synthesis protein cobW C-terminal domain KSS82_00525 PF01926 50S ribosome-binding GTPase KSS82_00530 PF02705 K+ potassium transporter KSS82_00535 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KSS82_00535 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg KSS82_00535 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase KSS82_00535 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II KSS82_00535 PF10371 Domain of unknown function KSS82_00540 PF00512 His Kinase A (phospho-acceptor) domain KSS82_00540 PF02702 Osmosensitive K+ channel His kinase sensor domain KSS82_00540 PF13493 Domain of unknown function (DUF4118) KSS82_00540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSS82_00545 PF00072 Response regulator receiver domain KSS82_00545 PF00486 Transcriptional regulatory protein, C terminal KSS82_00550 PF02416 mttA/Hcf106 family KSS82_00565 PF00563 EAL domain KSS82_00565 PF10388 EAL-domain associated signalling protein domain KSS82_00575 PF01292 Prokaryotic cytochrome b561 KSS82_00580 PF04264 YceI-like domain KSS82_00585 PF01226 Formate/nitrite transporter KSS82_00590 PF03466 LysR substrate binding domain KSS82_00590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSS82_00595 PF06496 Protein of unknown function (DUF1097) KSS82_00600 PF11398 Protein of unknown function (DUF2813) KSS82_00605 PF00149 Calcineurin-like phosphoesterase KSS82_00605 PF02872 5'-nucleotidase, C-terminal domain KSS82_00610 PF03741 Integral membrane protein TerC family KSS82_00620 PF03831 PhnA domain KSS82_00620 PF08274 PhnA Zinc-Ribbon KSS82_00670 PF00990 Diguanylate cyclase, GGDEF domain KSS82_00685 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch KSS82_00685 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KSS82_00685 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KSS82_00690 PF02233 NAD(P) transhydrogenase beta subunit KSS82_00700 PF00072 Response regulator receiver domain KSS82_00700 PF00486 Transcriptional regulatory protein, C terminal KSS82_00715 PF03701 Uncharacterised protein family (UPF0181) KSS82_00725 PF00239 Resolvase, N terminal domain KSS82_00725 PF18010 Cry35Ab1 HTH C-terminal domain KSS82_00750 PF00239 Resolvase, N terminal domain KSS82_00750 PF18010 Cry35Ab1 HTH C-terminal domain KSS82_00775 PF00239 Resolvase, N terminal domain KSS82_00775 PF18010 Cry35Ab1 HTH C-terminal domain KSS82_00795 PF01253 Translation initiation factor SUI1 KSS82_00805 PF07478 D-ala D-ala ligase C-terminus KSS82_00805 PF01820 D-ala D-ala ligase N-terminus KSS82_00815 PF13380 CoA binding domain KSS82_00815 PF00583 Acetyltransferase (GNAT) family KSS82_00815 PF13607 Succinyl-CoA ligase like flavodoxin domain KSS82_00820 PF03466 LysR substrate binding domain KSS82_00820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSS82_00825 PF12793 Sugar transport-related sRNA regulator N-term KSS82_00825 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KSS82_00835 PF03061 Thioesterase superfamily KSS82_00840 PF01435 Peptidase family M48 KSS82_00850 PF02798 Glutathione S-transferase, N-terminal domain KSS82_00850 PF00043 Glutathione S-transferase, C-terminal domain KSS82_00875 PF00005 ABC transporter KSS82_00875 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KSS82_00880 PF12911 N-terminal TM domain of oligopeptide transport permease C KSS82_00880 PF00528 Binding-protein-dependent transport system inner membrane component KSS82_00885 PF00528 Binding-protein-dependent transport system inner membrane component KSS82_00890 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KSS82_00915 PF00854 POT family KSS82_00925 PF07702 UTRA domain KSS82_00925 PF00392 Bacterial regulatory proteins, gntR family KSS82_00930 PF00528 Binding-protein-dependent transport system inner membrane component KSS82_00935 PF00005 ABC transporter KSS82_00945 PF00266 Aminotransferase class-V KSS82_00950 PF00202 Aminotransferase class-III KSS82_00955 PF13419 Haloacid dehalogenase-like hydrolase KSS82_00960 PF01272 Transcription elongation factor, GreA/GreB, C-term KSS82_00960 PF14760 Rnk N-terminus KSS82_00965 PF13419 Haloacid dehalogenase-like hydrolase KSS82_00980 PF01741 Large-conductance mechanosensitive channel, MscL KSS82_00985 PF01268 Formate--tetrahydrofolate ligase KSS82_00990 PF01625 Peptide methionine sulfoxide reductase KSS82_00990 PF01641 SelR domain KSS82_00995 PF01227 GTP cyclohydrolase I KSS82_01000 PF00994 Probable molybdopterin binding domain KSS82_01000 PF03454 MoeA C-terminal region (domain IV) KSS82_01000 PF03453 MoeA N-terminal region (domain I and II) KSS82_01005 PF00899 ThiF family KSS82_01015 PF00581 Rhodanese-like domain KSS82_01020 PF00704 Glycosyl hydrolases family 18 KSS82_01020 PF08329 Chitinase A, N-terminal domain KSS82_01025 PF04198 Putative sugar-binding domain KSS82_01030 PF00923 Transaldolase/Fructose-6-phosphate aldolase KSS82_01035 PF02780 Transketolase, C-terminal domain KSS82_01035 PF02779 Transketolase, pyrimidine binding domain KSS82_01035 PF00456 Transketolase, thiamine diphosphate binding domain KSS82_01040 PF04151 Bacterial pre-peptidase C-terminal domain KSS82_01040 PF07504 Fungalysin/Thermolysin Propeptide Motif KSS82_01040 PF02868 Thermolysin metallopeptidase, alpha-helical domain KSS82_01040 PF03413 Peptidase propeptide and YPEB domain KSS82_01040 PF01447 Thermolysin metallopeptidase, catalytic domain KSS82_01065 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KSS82_01065 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KSS82_01080 PF00857 Isochorismatase family KSS82_01090 PF06942 GlpM protein KSS82_01100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSS82_01100 PF03466 LysR substrate binding domain KSS82_01110 PF00881 Nitroreductase family KSS82_01115 PF00873 AcrB/AcrD/AcrF family KSS82_01130 PF04143 Sulphur transport KSS82_01150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSS82_01150 PF03466 LysR substrate binding domain KSS82_01155 PF00529 HlyD membrane-fusion protein of T1SS KSS82_01155 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KSS82_01210 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KSS82_01210 PF01266 FAD dependent oxidoreductase KSS82_01215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KSS82_01215 PF17200 Single Cache domain 2 KSS82_01215 PF00672 HAMP domain KSS82_01220 PF05736 OprF membrane domain KSS82_01220 PF00691 OmpA family KSS82_01225 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KSS82_01225 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KSS82_01230 PF13419 Haloacid dehalogenase-like hydrolase KSS82_01235 PF00672 HAMP domain KSS82_01235 PF12729 Four helix bundle sensory module for signal transduction KSS82_01235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KSS82_01240 PF03606 C4-dicarboxylate anaerobic carrier KSS82_01245 PF03313 Serine dehydratase alpha chain KSS82_01245 PF03315 Serine dehydratase beta chain KSS82_01250 PF00196 Bacterial regulatory proteins, luxR family KSS82_01250 PF00072 Response regulator receiver domain KSS82_01255 PF07730 Histidine kinase KSS82_01255 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term KSS82_01255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSS82_01255 PF00672 HAMP domain KSS82_01260 PF12838 4Fe-4S dicluster domain KSS82_01260 PF13187 4Fe-4S dicluster domain KSS82_01270 PF01568 Molydopterin dinucleotide binding domain KSS82_01270 PF00384 Molybdopterin oxidoreductase KSS82_01270 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KSS82_01275 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) KSS82_01280 PF03264 NapC/NirT cytochrome c family, N-terminal region KSS82_01290 PF01966 HD domain KSS82_01295 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus KSS82_01305 PF02803 Thiolase, C-terminal domain KSS82_01305 PF00108 Thiolase, N-terminal domain KSS82_01310 PF00106 short chain dehydrogenase KSS82_01315 PF02355 Protein export membrane protein KSS82_01315 PF07549 SecD/SecF GG Motif KSS82_01320 PF13721 SecD export protein N-terminal TM region KSS82_01320 PF02355 Protein export membrane protein KSS82_01320 PF07549 SecD/SecF GG Motif KSS82_01335 PF17158 Membrane-associated sensor, integral membrane domain KSS82_01335 PF00990 Diguanylate cyclase, GGDEF domain KSS82_01340 PF00483 Nucleotidyl transferase KSS82_01345 PF06483 Chitinase C KSS82_01345 PF00704 Glycosyl hydrolases family 18 KSS82_01350 PF00465 Iron-containing alcohol dehydrogenase KSS82_01360 PF00072 Response regulator receiver domain KSS82_01360 PF02954 Bacterial regulatory protein, Fis family KSS82_01360 PF14532 Sigma-54 interaction domain KSS82_01365 PF02743 Cache domain KSS82_01365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSS82_01365 PF00512 His Kinase A (phospho-acceptor) domain KSS82_01375 PF07690 Major Facilitator Superfamily KSS82_01380 PF02887 Pyruvate kinase, alpha/beta domain KSS82_01380 PF00224 Pyruvate kinase, barrel domain KSS82_01385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSS82_01385 PF00072 Response regulator receiver domain KSS82_01385 PF01627 Hpt domain KSS82_01385 PF00672 HAMP domain KSS82_01385 PF00512 His Kinase A (phospho-acceptor) domain KSS82_01390 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KSS82_01395 PF02142 MGS-like domain KSS82_01400 PF00857 Isochorismatase family KSS82_01410 PF01219 Prokaryotic diacylglycerol kinase KSS82_01425 PF12462 DNA helicase IV / RNA helicase N terminal KSS82_01425 PF00580 UvrD/REP helicase N-terminal domain KSS82_01425 PF13361 UvrD-like helicase C-terminal domain KSS82_01430 PF12805 FUSC-like inner membrane protein yccS KSS82_01435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSS82_01435 PF13188 PAS domain KSS82_01435 PF08448 PAS fold KSS82_01435 PF00512 His Kinase A (phospho-acceptor) domain KSS82_01435 PF00072 Response regulator receiver domain KSS82_01460 PF00005 ABC transporter KSS82_01460 PF03459 TOBE domain KSS82_01465 PF00528 Binding-protein-dependent transport system inner membrane component KSS82_01475 PF07685 CobB/CobQ-like glutamine amidotransferase domain KSS82_01475 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KSS82_01495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSS82_01495 PF00512 His Kinase A (phospho-acceptor) domain KSS82_01495 PF09308 LuxQ, periplasmic KSS82_01495 PF00072 Response regulator receiver domain KSS82_01500 PF13407 Periplasmic binding protein domain KSS82_01510 PF01541 GIY-YIG catalytic domain KSS82_01515 PF04337 Protein of unknown function, DUF480 KSS82_01525 PF04363 Protein of unknown function (DUF496) KSS82_01535 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KSS82_01535 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KSS82_01545 PF01266 FAD dependent oxidoreductase KSS82_01545 PF04324 BFD-like [2Fe-2S] binding domain KSS82_01550 PF00890 FAD binding domain KSS82_01555 PF02754 Cysteine-rich domain KSS82_01555 PF13183 4Fe-4S dicluster domain KSS82_01570 PF00535 Glycosyl transferase family 2 KSS82_01580 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KSS82_01580 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KSS82_01585 PF00085 Thioredoxin KSS82_01590 PF07690 Major Facilitator Superfamily KSS82_01615 PF03466 LysR substrate binding domain KSS82_01615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSS82_01620 PF00528 Binding-protein-dependent transport system inner membrane component KSS82_01625 PF00528 Binding-protein-dependent transport system inner membrane component KSS82_01630 PF00497 Bacterial extracellular solute-binding proteins, family 3 KSS82_01635 PF00005 ABC transporter KSS82_01645 PF05762 VWA domain containing CoxE-like protein KSS82_01650 PF12592 Protein of unknown function (DUF3763) KSS82_01650 PF17868 AAA lid domain KSS82_01650 PF07728 AAA domain (dynein-related subfamily) KSS82_01655 PF00293 NUDIX domain KSS82_01660 PF01212 Beta-eliminating lyase KSS82_01665 PF00034 Cytochrome c KSS82_01675 PF00270 DEAD/DEAH box helicase KSS82_01675 PF00271 Helicase conserved C-terminal domain KSS82_01680 PF04336 Acyl carrier protein phosphodiesterase KSS82_01685 PF03222 Tryptophan/tyrosine permease family KSS82_01690 PF16363 GDP-mannose 4,6 dehydratase KSS82_01695 PF03746 LamB/YcsF family KSS82_01700 PF02682 Carboxyltransferase domain, subdomain C and D KSS82_01705 PF02626 Carboxyltransferase domain, subdomain A and B KSS82_01720 PF00005 ABC transporter KSS82_01725 PF13472 GDSL-like Lipase/Acylhydrolase family KSS82_01730 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase KSS82_01730 PF12241 Trans-2-enoyl-CoA reductase catalytic region KSS82_01730 PF07055 Enoyl reductase FAD binding domain KSS82_01735 PF00563 EAL domain KSS82_01735 PF00498 FHA domain KSS82_01735 PF00990 Diguanylate cyclase, GGDEF domain KSS82_01745 PF00684 DnaJ central domain KSS82_01745 PF01556 DnaJ C terminal domain KSS82_01745 PF00226 DnaJ domain KSS82_01765 PF13419 Haloacid dehalogenase-like hydrolase KSS82_01780 PF00294 pfkB family carbohydrate kinase KSS82_01785 PF00884 Sulfatase KSS82_01795 PF00271 Helicase conserved C-terminal domain KSS82_01795 PF03880 DbpA RNA binding domain KSS82_01795 PF00270 DEAD/DEAH box helicase KSS82_01800 PF00575 S1 RNA binding domain KSS82_01800 PF00773 RNB domain KSS82_01800 PF08206 Ribonuclease B OB domain KSS82_01810 PF00550 Phosphopantetheine attachment site KSS82_01815 PF13193 AMP-binding enzyme C-terminal domain KSS82_01815 PF00501 AMP-binding enzyme KSS82_01825 PF00221 Aromatic amino acid lyase KSS82_01835 PF02801 Beta-ketoacyl synthase, C-terminal domain KSS82_01835 PF00109 Beta-ketoacyl synthase, N-terminal domain KSS82_01855 PF12849 PBP superfamily domain KSS82_01860 PF01575 MaoC like domain KSS82_01870 PF18416 N-acetylglucosamine binding protein domain 2 KSS82_01870 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading KSS82_01875 PF07690 Major Facilitator Superfamily KSS82_01905 PF00873 AcrB/AcrD/AcrF family KSS82_01920 PF00871 Acetokinase family KSS82_01930 PF07715 TonB-dependent Receptor Plug Domain KSS82_01930 PF00593 TonB dependent receptor KSS82_01935 PF12833 Helix-turn-helix domain KSS82_01940 PF00005 ABC transporter KSS82_01945 PF01032 FecCD transport family KSS82_01950 PF01032 FecCD transport family KSS82_01975 PF05547 Immune inhibitor A peptidase M6 KSS82_01975 PF00801 PKD domain KSS82_01980 PF03280 Proteobacterial lipase chaperone protein KSS82_01985 PF00561 alpha/beta hydrolase fold KSS82_01990 PF16458 Beta-prism lectin KSS82_01990 PF07968 Leukocidin/Hemolysin toxin family KSS82_01990 PF12563 Hemolytic toxin N terminal KSS82_02010 PF00657 GDSL-like Lipase/Acylhydrolase KSS82_02025 PF07690 Major Facilitator Superfamily KSS82_02030 PF03553 Na+/H+ antiporter family KSS82_02040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSS82_02040 PF00512 His Kinase A (phospho-acceptor) domain KSS82_02040 PF00497 Bacterial extracellular solute-binding proteins, family 3 KSS82_02045 PF11849 Domain of unknown function (DUF3369) KSS82_02050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KSS82_02050 PF00672 HAMP domain KSS82_02050 PF12729 Four helix bundle sensory module for signal transduction KSS82_02055 PF01467 Cytidylyltransferase-like KSS82_02060 PF02540 NAD synthase KSS82_02065 PF03605 Anaerobic c4-dicarboxylate membrane transporter KSS82_02070 PF00270 DEAD/DEAH box helicase KSS82_02070 PF00271 Helicase conserved C-terminal domain KSS82_02080 PF04886 PT repeat KSS82_02080 PF07715 TonB-dependent Receptor Plug Domain KSS82_02080 PF00593 TonB dependent receptor KSS82_02085 PF01243 Pyridoxamine 5'-phosphate oxidase KSS82_02090 PF06228 Haem utilisation ChuX/HutX KSS82_02095 PF04055 Radical SAM superfamily KSS82_02100 PF03544 Gram-negative bacterial TonB protein C-terminal KSS82_02105 PF01618 MotA/TolQ/ExbB proton channel family KSS82_02110 PF02472 Biopolymer transport protein ExbD/TolR KSS82_02120 PF01032 FecCD transport family KSS82_02125 PF00005 ABC transporter KSS82_02130 PF00478 IMP dehydrogenase / GMP reductase domain KSS82_02140 PF07885 Ion channel KSS82_02150 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KSS82_02150 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KSS82_02155 PF01256 Carbohydrate kinase KSS82_02155 PF03853 YjeF-related protein N-terminus KSS82_02165 PF00072 Response regulator receiver domain KSS82_02180 PF03889 Alternative ribosome-rescue factor A KSS82_02185 PF00313 'Cold-shock' DNA-binding domain KSS82_02190 PF00970 Oxidoreductase FAD-binding domain KSS82_02190 PF00042 Globin KSS82_02190 PF00175 Oxidoreductase NAD-binding domain KSS82_02195 PF00158 Sigma-54 interaction domain KSS82_02195 PF01590 GAF domain KSS82_02205 PF01546 Peptidase family M20/M25/M40 KSS82_02205 PF07687 Peptidase dimerisation domain KSS82_02210 PF07670 Nucleoside recognition KSS82_02210 PF01773 Na+ dependent nucleoside transporter N-terminus KSS82_02210 PF07662 Na+ dependent nucleoside transporter C-terminus KSS82_02225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KSS82_02225 PF00672 HAMP domain KSS82_02225 PF02743 Cache domain KSS82_02230 PF07726 ATPase family associated with various cellular activities (AAA) KSS82_02230 PF17863 AAA lid domain KSS82_02235 PF01882 Protein of unknown function DUF58 KSS82_02250 PF07584 Aerotolerance regulator N-terminal KSS82_02250 PF13519 von Willebrand factor type A domain KSS82_02265 PF00313 'Cold-shock' DNA-binding domain KSS82_02270 PF00563 EAL domain KSS82_02270 PF00990 Diguanylate cyclase, GGDEF domain KSS82_02270 PF08448 PAS fold KSS82_02280 PF12843 Putative quorum-sensing-regulated virulence factor KSS82_02290 PF01212 Beta-eliminating lyase KSS82_02295 PF12848 ABC transporter KSS82_02295 PF00005 ABC transporter KSS82_02295 PF16326 ABC transporter C-terminal domain KSS82_02300 PF00970 Oxidoreductase FAD-binding domain KSS82_02300 PF00042 Globin KSS82_02300 PF00175 Oxidoreductase NAD-binding domain KSS82_02305 PF00356 Bacterial regulatory proteins, lacI family KSS82_02310 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KSS82_02320 PF03611 PTS system sugar-specific permease component KSS82_02325 PF01327 Polypeptide deformylase KSS82_02335 PF01266 FAD dependent oxidoreductase KSS82_02350 PF00072 Response regulator receiver domain KSS82_02350 PF02954 Bacterial regulatory protein, Fis family KSS82_02350 PF00158 Sigma-54 interaction domain KSS82_02355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSS82_02355 PF00512 His Kinase A (phospho-acceptor) domain KSS82_02355 PF02743 Cache domain KSS82_02370 PF07690 Major Facilitator Superfamily KSS82_02375 PF03009 Glycerophosphoryl diester phosphodiesterase family KSS82_02385 PF01048 Phosphorylase superfamily KSS82_02390 PF04973 Nicotinamide mononucleotide transporter KSS82_02395 PF02129 X-Pro dipeptidyl-peptidase (S15 family) KSS82_02415 PF00356 Bacterial regulatory proteins, lacI family KSS82_02420 PF00294 pfkB family carbohydrate kinase KSS82_02425 PF13407 Periplasmic binding protein domain KSS82_02430 PF02653 Branched-chain amino acid transport system / permease component KSS82_02435 PF00005 ABC transporter KSS82_02440 PF05025 RbsD / FucU transport protein family KSS82_02470 PF01471 Putative peptidoglycan binding domain KSS82_02470 PF04717 Type VI secretion system, phage-baseplate injector KSS82_02480 PF06761 Intracellular multiplication and human macrophage-killing KSS82_02480 PF14331 ImcF-related N-terminal domain KSS82_02480 PF06744 Type VI secretion protein IcmF C-terminal KSS82_02495 PF00158 Sigma-54 interaction domain KSS82_02495 PF02954 Bacterial regulatory protein, Fis family KSS82_02500 PF10431 C-terminal, D2-small domain, of ClpB protein KSS82_02500 PF17871 AAA lid domain KSS82_02500 PF07724 AAA domain (Cdc48 subfamily) KSS82_02500 PF00004 ATPase family associated with various cellular activities (AAA) KSS82_02510 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE KSS82_02530 PF05947 Type VI secretion system, TssF KSS82_02540 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath KSS82_02560 PF00849 RNA pseudouridylate synthase KSS82_02565 PF00916 Sulfate permease family KSS82_02565 PF01740 STAS domain KSS82_02570 PF13419 Haloacid dehalogenase-like hydrolase KSS82_02575 PF00563 EAL domain KSS82_02575 PF00196 Bacterial regulatory proteins, luxR family KSS82_02580 PF00581 Rhodanese-like domain KSS82_02585 PF02743 Cache domain KSS82_02585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KSS82_02585 PF00672 HAMP domain KSS82_02590 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KSS82_02590 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KSS82_02595 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain KSS82_02595 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KSS82_02605 PF01483 Proprotein convertase P-domain KSS82_02605 PF02868 Thermolysin metallopeptidase, alpha-helical domain KSS82_02605 PF01447 Thermolysin metallopeptidase, catalytic domain KSS82_02605 PF07504 Fungalysin/Thermolysin Propeptide Motif KSS82_02625 PF02001 Protein of unknown function DUF134 KSS82_02640 PF00375 Sodium:dicarboxylate symporter family KSS82_02645 PF07670 Nucleoside recognition KSS82_02650 PF07670 Nucleoside recognition KSS82_02655 PF03600 Citrate transporter KSS82_02660 PF12431 Transcriptional regulator KSS82_02660 PF00072 Response regulator receiver domain KSS82_02665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSS82_02665 PF17203 Single cache domain 3 KSS82_02670 PF00939 Sodium:sulfate symporter transmembrane region KSS82_02680 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KSS82_02680 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KSS82_02685 PF06029 AlkA N-terminal domain KSS82_02685 PF00730 HhH-GPD superfamily base excision DNA repair protein KSS82_02690 PF07681 DoxX KSS82_02695 PF03466 LysR substrate binding domain KSS82_02695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSS82_02715 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase KSS82_02725 PF07148 Maltose operon periplasmic protein precursor (MalM) KSS82_02730 PF02264 LamB porin KSS82_02735 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KSS82_02735 PF00128 Alpha amylase, catalytic domain KSS82_02740 PF01566 Natural resistance-associated macrophage protein KSS82_02750 PF00672 HAMP domain KSS82_02750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KSS82_02765 PF00462 Glutaredoxin KSS82_02770 PF12852 Cupin KSS82_02770 PF12833 Helix-turn-helix domain KSS82_02795 PF01810 LysE type translocator KSS82_02810 PF00270 DEAD/DEAH box helicase KSS82_02810 PF00271 Helicase conserved C-terminal domain KSS82_02815 PF03786 D-mannonate dehydratase (UxuA) KSS82_02820 PF07729 FCD domain KSS82_02820 PF00392 Bacterial regulatory proteins, gntR family KSS82_02825 PF03480 Bacterial extracellular solute-binding protein, family 7 KSS82_02830 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component KSS82_02835 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KSS82_02840 PF08125 Mannitol dehydrogenase C-terminal domain KSS82_02840 PF01232 Mannitol dehydrogenase Rossmann domain KSS82_02845 PF02614 Glucuronate isomerase KSS82_02850 PF00294 pfkB family carbohydrate kinase KSS82_02855 PF01081 KDPG and KHG aldolase KSS82_02860 PF10688 Bacterial inner membrane protein KSS82_02865 PF05199 GMC oxidoreductase KSS82_02865 PF00732 GMC oxidoreductase KSS82_02870 PF00171 Aldehyde dehydrogenase family KSS82_02875 PF12833 Helix-turn-helix domain KSS82_02875 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KSS82_02885 PF00664 ABC transporter transmembrane region KSS82_02885 PF00005 ABC transporter KSS82_02895 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KSS82_02905 PF01810 LysE type translocator KSS82_02910 PF12833 Helix-turn-helix domain KSS82_02925 PF01557 Fumarylacetoacetate (FAA) hydrolase family KSS82_02930 PF13609 Gram-negative porin KSS82_02935 PF00892 EamA-like transporter family KSS82_02940 PF00462 Glutaredoxin KSS82_02955 PF12146 Serine aminopeptidase, S33 KSS82_02960 PF07690 Major Facilitator Superfamily KSS82_02965 PF03466 LysR substrate binding domain KSS82_02965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSS82_02970 PF00563 EAL domain KSS82_02970 PF00990 Diguanylate cyclase, GGDEF domain KSS82_02970 PF03707 Bacterial signalling protein N terminal repeat KSS82_02970 PF13188 PAS domain KSS82_02975 PF08525 Opacity-associated protein A N-terminal motif KSS82_02975 PF01476 LysM domain KSS82_02975 PF01551 Peptidase family M23 KSS82_02985 PF01740 STAS domain KSS82_02985 PF00916 Sulfate permease family KSS82_02990 PF07670 Nucleoside recognition KSS82_03000 PF00563 EAL domain KSS82_03000 PF00990 Diguanylate cyclase, GGDEF domain KSS82_03000 PF03707 Bacterial signalling protein N terminal repeat KSS82_03005 PF00005 ABC transporter KSS82_03010 PF00528 Binding-protein-dependent transport system inner membrane component KSS82_03015 PF00528 Binding-protein-dependent transport system inner membrane component KSS82_03020 PF12849 PBP superfamily domain KSS82_03025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KSS82_03025 PF12729 Four helix bundle sensory module for signal transduction KSS82_03025 PF00672 HAMP domain KSS82_03030 PF00271 Helicase conserved C-terminal domain KSS82_03030 PF00270 DEAD/DEAH box helicase KSS82_03040 PF17969 L,D-transpeptidase C-terminal domain KSS82_03040 PF03734 L,D-transpeptidase catalytic domain KSS82_03040 PF01476 LysM domain KSS82_03045 PF03441 FAD binding domain of DNA photolyase KSS82_03045 PF00875 DNA photolyase KSS82_03050 PF13411 MerR HTH family regulatory protein KSS82_03055 PF08349 Protein of unknown function (DUF1722) KSS82_03060 PF01048 Phosphorylase superfamily KSS82_03075 PF00990 Diguanylate cyclase, GGDEF domain KSS82_03080 PF11742 Protein of unknown function (DUF3302) KSS82_03085 PF00529 HlyD membrane-fusion protein of T1SS KSS82_03085 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KSS82_03100 PF12945 Flagellar protein YcgR KSS82_03100 PF07238 PilZ domain KSS82_03105 PF03616 Sodium/glutamate symporter KSS82_03120 PF02630 SCO1/SenC KSS82_03130 PF00375 Sodium:dicarboxylate symporter family KSS82_03140 PF01569 PAP2 superfamily KSS82_03165 PF08329 Chitinase A, N-terminal domain KSS82_03165 PF00704 Glycosyl hydrolases family 18 KSS82_03170 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) KSS82_03175 PF00939 Sodium:sulfate symporter transmembrane region KSS82_03185 PF00842 Alanine racemase, C-terminal domain KSS82_03185 PF01757 Acyltransferase family KSS82_03185 PF01168 Alanine racemase, N-terminal domain KSS82_03215 PF04717 Type VI secretion system, phage-baseplate injector KSS82_03220 PF05638 Type VI secretion system effector, Hcp KSS82_03225 PF00128 Alpha amylase, catalytic domain KSS82_03225 PF02806 Alpha amylase, C-terminal all-beta domain KSS82_03225 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KSS82_03230 PF02446 4-alpha-glucanotransferase KSS82_03235 PF00343 Carbohydrate phosphorylase KSS82_03240 PF00196 Bacterial regulatory proteins, luxR family KSS82_03240 PF17874 MalT-like TPR region KSS82_03245 PF10928 Protein of unknown function (DUF2810) KSS82_03250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KSS82_03250 PF00672 HAMP domain KSS82_03250 PF17200 Single Cache domain 2 KSS82_03255 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KSS82_03255 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KSS82_03260 PF01709 Transcriptional regulator KSS82_03285 PF18607 ParA helix turn helix domain KSS82_03285 PF13614 AAA domain KSS82_03290 PF08775 ParB family KSS82_03290 PF02195 ParB-like nuclease domain KSS82_03295 PF13416 Bacterial extracellular solute-binding protein KSS82_03300 PF13718 GNAT acetyltransferase 2 KSS82_03300 PF05127 Helicase KSS82_03310 PF00501 AMP-binding enzyme KSS82_03320 PF00106 short chain dehydrogenase KSS82_03330 PF00072 Response regulator receiver domain KSS82_03330 PF00486 Transcriptional regulatory protein, C terminal KSS82_03335 PF08521 Two-component sensor kinase N-terminal KSS82_03335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSS82_03335 PF00512 His Kinase A (phospho-acceptor) domain KSS82_03340 PF08019 Phosphoethanolamine transferase EptA/EptB KSS82_03340 PF00884 Sulfatase KSS82_03350 PF00486 Transcriptional regulatory protein, C terminal KSS82_03350 PF00072 Response regulator receiver domain KSS82_03355 PF09078 CheY binding KSS82_03355 PF02895 Signal transducing histidine kinase, homodimeric domain KSS82_03355 PF01627 Hpt domain KSS82_03355 PF01584 CheW-like domain KSS82_03355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSS82_03360 PF01584 CheW-like domain KSS82_03365 PF01584 CheW-like domain KSS82_03370 PF00672 HAMP domain KSS82_03370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KSS82_03370 PF02203 Tar ligand binding domain homologue KSS82_03375 PF01739 CheR methyltransferase, SAM binding domain KSS82_03375 PF03705 CheR methyltransferase, all-alpha domain KSS82_03380 PF03975 CheD chemotactic sensory transduction KSS82_03385 PF01339 CheB methylesterase KSS82_03385 PF00072 Response regulator receiver domain KSS82_03390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KSS82_03390 PF00672 HAMP domain KSS82_03390 PF02743 Cache domain KSS82_03400 PF00990 Diguanylate cyclase, GGDEF domain KSS82_03400 PF00072 Response regulator receiver domain KSS82_03405 PF03437 BtpA family KSS82_03410 PF13407 Periplasmic binding protein domain KSS82_03415 PF00005 ABC transporter KSS82_03420 PF02653 Branched-chain amino acid transport system / permease component KSS82_03425 PF02653 Branched-chain amino acid transport system / permease component KSS82_03435 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KSS82_03435 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KSS82_03440 PF00455 DeoR C terminal sensor domain KSS82_03440 PF08220 DeoR-like helix-turn-helix domain KSS82_03450 PF00005 ABC transporter KSS82_03450 PF03412 Peptidase C39 family KSS82_03450 PF00664 ABC transporter transmembrane region KSS82_03465 PF00529 HlyD membrane-fusion protein of T1SS KSS82_03470 PF01243 Pyridoxamine 5'-phosphate oxidase KSS82_03470 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region KSS82_03475 PF00072 Response regulator receiver domain KSS82_03475 PF00196 Bacterial regulatory proteins, luxR family KSS82_03490 PF12833 Helix-turn-helix domain KSS82_03495 PF00171 Aldehyde dehydrogenase family KSS82_03495 PF14850 DNA-binding domain of Proline dehydrogenase KSS82_03495 PF18327 Proline utilization A proline dehydrogenase N-terminal domain KSS82_03495 PF01619 Proline dehydrogenase KSS82_03505 PF00474 Sodium:solute symporter family KSS82_03515 PF02743 Cache domain KSS82_03515 PF00672 HAMP domain KSS82_03515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KSS82_03520 PF01037 Lrp/AsnC ligand binding domain KSS82_03525 PF00171 Aldehyde dehydrogenase family KSS82_03545 PF00196 Bacterial regulatory proteins, luxR family KSS82_03545 PF03472 Autoinducer binding domain KSS82_03550 PF10940 Protein of unknown function (DUF2618) KSS82_03555 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain KSS82_03555 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain KSS82_03555 PF01276 Orn/Lys/Arg decarboxylase, major domain KSS82_03560 PF13520 Amino acid permease KSS82_03565 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KSS82_03575 PF04013 Putative SAM-dependent RNA methyltransferase KSS82_03580 PF03466 LysR substrate binding domain KSS82_03580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSS82_03585 PF00106 short chain dehydrogenase KSS82_03595 PF03466 LysR substrate binding domain KSS82_03595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSS82_03600 PF13460 NAD(P)H-binding KSS82_03630 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KSS82_03635 PF05068 Mannitol repressor KSS82_03640 PF01232 Mannitol dehydrogenase Rossmann domain KSS82_03640 PF08125 Mannitol dehydrogenase C-terminal domain KSS82_03645 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KSS82_03645 PF02378 Phosphotransferase system, EIIC KSS82_03645 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KSS82_03650 PF01551 Peptidase family M23 KSS82_03650 PF04225 Opacity-associated protein A LysM-like domain KSS82_03660 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KSS82_03660 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KSS82_03660 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KSS82_03660 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KSS82_03665 PF00528 Binding-protein-dependent transport system inner membrane component KSS82_03670 PF00497 Bacterial extracellular solute-binding proteins, family 3 KSS82_03675 PF00528 Binding-protein-dependent transport system inner membrane component KSS82_03680 PF00005 ABC transporter KSS82_03685 PF00793 DAHP synthetase I family KSS82_03690 PF01554 MatE KSS82_03695 PF08447 PAS fold KSS82_03695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KSS82_03700 PF01740 STAS domain KSS82_03700 PF08678 Rsbr N terminal KSS82_03720 PF01070 FMN-dependent dehydrogenase KSS82_03725 PF02652 L-lactate permease KSS82_03735 PF03466 LysR substrate binding domain KSS82_03735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSS82_03740 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KSS82_03740 PF00005 ABC transporter KSS82_03750 PF05362 Lon protease (S16) C-terminal proteolytic domain KSS82_03750 PF13654 AAA domain KSS82_03755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KSS82_03755 PF00672 HAMP domain KSS82_03760 PF07690 Major Facilitator Superfamily KSS82_03770 PF06865 Pyrimidine/purine nucleoside phosphorylase KSS82_03775 PF02678 Pirin KSS82_03775 PF05726 Pirin C-terminal cupin domain KSS82_03785 PF00563 EAL domain KSS82_03785 PF00990 Diguanylate cyclase, GGDEF domain KSS82_03790 PF03466 LysR substrate binding domain KSS82_03790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSS82_03810 PF03707 Bacterial signalling protein N terminal repeat KSS82_03810 PF00563 EAL domain KSS82_03810 PF00990 Diguanylate cyclase, GGDEF domain KSS82_03825 PF00990 Diguanylate cyclase, GGDEF domain KSS82_03835 PF01584 CheW-like domain KSS82_03835 PF00072 Response regulator receiver domain KSS82_03845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSS82_03845 PF03466 LysR substrate binding domain KSS82_03855 PF00196 Bacterial regulatory proteins, luxR family KSS82_03860 PF01906 Putative heavy-metal-binding KSS82_03875 PF13302 Acetyltransferase (GNAT) domain KSS82_03880 PF00005 ABC transporter KSS82_03880 PF08402 TOBE domain KSS82_03885 PF01547 Bacterial extracellular solute-binding protein KSS82_03890 PF00528 Binding-protein-dependent transport system inner membrane component KSS82_03890 PF14785 Maltose transport system permease protein MalF P2 domain KSS82_03895 PF00528 Binding-protein-dependent transport system inner membrane component KSS82_03910 PF00455 DeoR C terminal sensor domain KSS82_03910 PF08220 DeoR-like helix-turn-helix domain KSS82_03915 PF08448 PAS fold KSS82_03915 PF00990 Diguanylate cyclase, GGDEF domain KSS82_03940 PF00313 'Cold-shock' DNA-binding domain KSS82_03950 PF05661 Protein of unknown function (DUF808) KSS82_03955 PF05958 tRNA (Uracil-5-)-methyltransferase KSS82_03960 PF01979 Amidohydrolase family KSS82_03965 PF03476 MOSC N-terminal beta barrel domain KSS82_03965 PF03476 MOSC N-terminal beta barrel domain KSS82_03965 PF00111 2Fe-2S iron-sulfur cluster binding domain KSS82_03965 PF03473 MOSC domain KSS82_03965 PF00111 2Fe-2S iron-sulfur cluster binding domain KSS82_03965 PF03473 MOSC domain KSS82_03970 PF00672 HAMP domain KSS82_03970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KSS82_03970 PF02743 Cache domain KSS82_04000 PF01243 Pyridoxamine 5'-phosphate oxidase KSS82_04005 PF00672 HAMP domain KSS82_04005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KSS82_04010 PF00034 Cytochrome c KSS82_04010 PF03150 Di-haem cytochrome c peroxidase KSS82_04015 PF05651 Putative sugar diacid recognition KSS82_04015 PF17853 GGDEF-like domain KSS82_04015 PF13556 PucR C-terminal helix-turn-helix domain KSS82_04020 PF02447 GntP family permease KSS82_04025 PF02595 Glycerate kinase family KSS82_04045 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain KSS82_04045 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KSS82_04050 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase KSS82_04055 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain KSS82_04055 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain KSS82_04080 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KSS82_04085 PF03466 LysR substrate binding domain KSS82_04085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSS82_04090 PF01053 Cys/Met metabolism PLP-dependent enzyme KSS82_04095 PF00155 Aminotransferase class I and II KSS82_04100 PF08240 Alcohol dehydrogenase GroES-like domain KSS82_04100 PF00107 Zinc-binding dehydrogenase KSS82_04115 PF00271 Helicase conserved C-terminal domain KSS82_04140 PF00768 D-alanyl-D-alanine carboxypeptidase KSS82_04155 PF03922 OmpW family KSS82_04160 PF07504 Fungalysin/Thermolysin Propeptide Motif KSS82_04160 PF04151 Bacterial pre-peptidase C-terminal domain KSS82_04160 PF02868 Thermolysin metallopeptidase, alpha-helical domain KSS82_04160 PF01447 Thermolysin metallopeptidase, catalytic domain KSS82_04160 PF03413 Peptidase propeptide and YPEB domain KSS82_04165 PF12262 Bacterial virulence factor lipase N-terminal KSS82_04170 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) KSS82_04175 PF00128 Alpha amylase, catalytic domain KSS82_04180 PF00248 Aldo/keto reductase family KSS82_04190 PF00005 ABC transporter KSS82_04195 PF00005 ABC transporter KSS82_04195 PF02687 FtsX-like permease family KSS82_04195 PF12704 MacB-like periplasmic core domain KSS82_04210 PF07694 5TMR of 5TMR-LYT KSS82_04210 PF13492 GAF domain KSS82_04210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSS82_04210 PF06580 Histidine kinase KSS82_04215 PF00072 Response regulator receiver domain KSS82_04215 PF04397 LytTr DNA-binding domain KSS82_04225 PF00990 Diguanylate cyclase, GGDEF domain KSS82_04230 PF13520 Amino acid permease KSS82_04245 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KSS82_04245 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KSS82_04250 PF00563 EAL domain KSS82_04250 PF00990 Diguanylate cyclase, GGDEF domain KSS82_04250 PF03707 Bacterial signalling protein N terminal repeat KSS82_04255 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KSS82_04260 PF02566 OsmC-like protein KSS82_04265 PF00571 CBS domain KSS82_04265 PF03471 Transporter associated domain KSS82_04265 PF01595 Cyclin M transmembrane N-terminal domain KSS82_04270 PF14602 Hexapeptide repeat of succinyl-transferase KSS82_04270 PF00132 Bacterial transferase hexapeptide (six repeats) KSS82_04270 PF12464 Maltose acetyltransferase KSS82_04275 PF00892 EamA-like transporter family KSS82_04295 PF00501 AMP-binding enzyme KSS82_04295 PF13193 AMP-binding enzyme C-terminal domain KSS82_04300 PF00351 Biopterin-dependent aromatic amino acid hydroxylase KSS82_04305 PF01329 Pterin 4 alpha carbinolamine dehydratase KSS82_04310 PF06316 Enterobacterial Ail/Lom protein KSS82_04325 PF01769 Divalent cation transporter KSS82_04325 PF03448 MgtE intracellular N domain KSS82_04325 PF00571 CBS domain KSS82_04350 PF17944 Arginine decarboxylase C-terminal helical extension KSS82_04350 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KSS82_04350 PF17810 Arginine decarboxylase helical bundle domain KSS82_04355 PF00491 Arginase family KSS82_04360 PF00563 EAL domain KSS82_04360 PF01590 GAF domain KSS82_04360 PF00990 Diguanylate cyclase, GGDEF domain KSS82_04360 PF00360 Phytochrome region KSS82_04365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KSS82_04365 PF00672 HAMP domain KSS82_04365 PF02743 Cache domain KSS82_04370 PF00282 Pyridoxal-dependent decarboxylase conserved domain KSS82_04375 PF07943 Penicillin-binding protein 5, C-terminal domain KSS82_04375 PF00768 D-alanyl-D-alanine carboxypeptidase KSS82_04390 PF13472 GDSL-like Lipase/Acylhydrolase family KSS82_04390 PF17996 Carbohydrate esterase 2 N-terminal KSS82_04395 PF02347 Glycine cleavage system P-protein KSS82_04400 PF01597 Glycine cleavage H-protein KSS82_04405 PF00464 Serine hydroxymethyltransferase KSS82_04415 PF01571 Aminomethyltransferase folate-binding domain KSS82_04415 PF08669 Glycine cleavage T-protein C-terminal barrel domain KSS82_04420 PF03129 Anticodon binding domain KSS82_04420 PF02824 TGS domain KSS82_04420 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KSS82_04420 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KSS82_04425 PF00707 Translation initiation factor IF-3, C-terminal domain KSS82_04425 PF05198 Translation initiation factor IF-3, N-terminal domain KSS82_04430 PF01632 Ribosomal protein L35 KSS82_04435 PF00453 Ribosomal protein L20 KSS82_04440 PF13495 Phage integrase, N-terminal SAM-like domain KSS82_04440 PF00589 Phage integrase family KSS82_04460 PF05016 ParE toxin of type II toxin-antitoxin system, parDE KSS82_04675 PF12464 Maltose acetyltransferase KSS82_04675 PF14602 Hexapeptide repeat of succinyl-transferase KSS82_04685 PF02810 SEC-C motif KSS82_04685 PF07517 SecA DEAD-like domain KSS82_04685 PF01043 SecA preprotein cross-linking domain KSS82_04685 PF07516 SecA Wing and Scaffold domain KSS82_04790 PF05016 ParE toxin of type II toxin-antitoxin system, parDE KSS82_04970 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KSS82_05010 PF02048 Heat-stable enterotoxin ST KSS82_05105 PF04229 GrpB protein KSS82_05120 PF01844 HNH endonuclease KSS82_05150 PF17676 LD-carboxypeptidase C-terminal domain KSS82_05150 PF02016 LD-carboxypeptidase N-terminal domain KSS82_05155 PF01966 HD domain KSS82_05175 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH KSS82_05180 PF13614 AAA domain KSS82_05225 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KSS82_05235 PF08299 Bacterial dnaA protein helix-turn-helix KSS82_05235 PF00308 Bacterial dnaA protein KSS82_05235 PF11638 DnaA N-terminal domain KSS82_05240 PF00712 DNA polymerase III beta subunit, N-terminal domain KSS82_05240 PF02767 DNA polymerase III beta subunit, central domain KSS82_05240 PF02768 DNA polymerase III beta subunit, C-terminal domain KSS82_05245 PF02463 RecF/RecN/SMC N terminal domain KSS82_05250 PF01751 Toprim domain KSS82_05250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSS82_05250 PF18053 DNA gyrase B subunit insert domain KSS82_05250 PF00204 DNA gyrase B KSS82_05250 PF00986 DNA gyrase B subunit, carboxyl terminus KSS82_05260 PF00011 Hsp20/alpha crystallin family KSS82_05265 PF00155 Aminotransferase class I and II KSS82_05270 PF05746 DALR anticodon binding domain KSS82_05270 PF02092 Glycyl-tRNA synthetase beta subunit KSS82_05275 PF02091 Glycyl-tRNA synthetase alpha subunit KSS82_05280 PF01169 Uncharacterized protein family UPF0016 KSS82_05290 PF01206 Sulfurtransferase TusA KSS82_05300 PF00107 Zinc-binding dehydrogenase KSS82_05300 PF08240 Alcohol dehydrogenase GroES-like domain KSS82_05305 PF00291 Pyridoxal-phosphate dependent enzyme KSS82_05305 PF00585 C-terminal regulatory domain of Threonine dehydratase KSS82_05310 PF00920 Dehydratase family KSS82_05315 PF01063 Amino-transferase class IV KSS82_05325 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KSS82_05325 PF00205 Thiamine pyrophosphate enzyme, central domain KSS82_05325 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KSS82_05330 PF13335 Magnesium chelatase, subunit ChlI C-terminal KSS82_05330 PF01078 Magnesium chelatase, subunit ChlI KSS82_05335 PF01553 Acyltransferase KSS82_05340 PF01323 DSBA-like thioredoxin domain KSS82_05345 PF01636 Phosphotransferase enzyme family KSS82_05350 PF13746 4Fe-4S dicluster domain KSS82_05350 PF12801 4Fe-4S binding domain KSS82_05350 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase KSS82_05355 PF06288 Protein of unknown function (DUF1040) KSS82_05360 PF07070 SpoOM protein KSS82_05365 PF03006 Haemolysin-III related KSS82_05375 PF02386 Cation transport protein KSS82_05380 PF02080 TrkA-C domain KSS82_05380 PF02254 TrkA-N domain KSS82_05385 PF01189 16S rRNA methyltransferase RsmB/F KSS82_05385 PF01029 NusB family KSS82_05390 PF02911 Formyl transferase, C-terminal domain KSS82_05390 PF00551 Formyl transferase KSS82_05395 PF01327 Polypeptide deformylase KSS82_05400 PF01476 LysM domain KSS82_05405 PF02481 DNA recombination-mediator protein A KSS82_05405 PF17782 DprA winged helix domain KSS82_05410 PF04361 Protein of unknown function (DUF494) KSS82_05415 PF01396 Topoisomerase DNA binding C4 zinc finger KSS82_05420 PF02222 ATP-grasp domain KSS82_05420 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KSS82_05425 PF00731 AIR carboxylase KSS82_05430 PF01300 Telomere recombination KSS82_05435 PF01218 Coproporphyrinogen III oxidase KSS82_05440 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KSS82_05440 PF08501 Shikimate dehydrogenase substrate binding domain KSS82_05440 PF01488 Shikimate / quinate 5-dehydrogenase KSS82_05450 PF00132 Bacterial transferase hexapeptide (six repeats) KSS82_05485 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KSS82_05490 PF13667 ThiC-associated domain KSS82_05490 PF01964 Radical SAM ThiC family KSS82_05495 PF02581 Thiamine monophosphate synthase KSS82_05500 PF00899 ThiF family KSS82_05505 PF02597 ThiS family KSS82_05510 PF05690 Thiazole biosynthesis protein ThiG KSS82_05515 PF06968 Biotin and Thiamin Synthesis associated domain KSS82_05515 PF04055 Radical SAM superfamily KSS82_05520 PF00557 Metallopeptidase family M24 KSS82_05520 PF01321 Creatinase/Prolidase N-terminal domain KSS82_05520 PF01321 Creatinase/Prolidase N-terminal domain KSS82_05520 PF00557 Metallopeptidase family M24 KSS82_05525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSS82_05525 PF03466 LysR substrate binding domain KSS82_05530 PF07690 Major Facilitator Superfamily KSS82_05540 PF01037 Lrp/AsnC ligand binding domain KSS82_05545 PF08448 PAS fold KSS82_05545 PF00990 Diguanylate cyclase, GGDEF domain KSS82_05545 PF00563 EAL domain KSS82_05550 PF04445 Putative SAM-dependent methyltransferase KSS82_05560 PF00892 EamA-like transporter family KSS82_05565 PF00582 Universal stress protein family KSS82_05570 PF00210 Ferritin-like domain KSS82_05575 PF10625 Universal stress protein B (UspB) KSS82_05590 PF02646 RmuC family KSS82_05595 PF01209 ubiE/COQ5 methyltransferase family KSS82_05600 PF02036 SCP-2 sterol transfer family KSS82_05605 PF03109 ABC1 family KSS82_05610 PF02416 mttA/Hcf106 family KSS82_05615 PF02416 mttA/Hcf106 family KSS82_05620 PF00902 Sec-independent protein translocase protein (TatC) KSS82_05625 PF01554 MatE KSS82_05635 PF01726 LexA DNA binding domain KSS82_05635 PF00717 Peptidase S24-like KSS82_05640 PF01553 Acyltransferase KSS82_05645 PF01040 UbiA prenyltransferase family KSS82_05650 PF04345 Chorismate lyase KSS82_05655 PF03748 Flagellar basal body-associated protein FliL KSS82_05660 PF01694 Rhomboid family KSS82_05660 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease KSS82_05665 PF00581 Rhodanese-like domain KSS82_05670 PF01026 TatD related DNase KSS82_05675 PF00490 Delta-aminolevulinic acid dehydratase KSS82_05680 PF00583 Acetyltransferase (GNAT) family KSS82_05685 PF01612 3'-5' exonuclease KSS82_05685 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KSS82_05685 PF01367 5'-3' exonuclease, C-terminal SAM fold KSS82_05685 PF00476 DNA polymerase family A KSS82_05690 PF01926 50S ribosome-binding GTPase KSS82_05695 PF00034 Cytochrome c KSS82_05705 PF04220 Der GTPase activator (YihI) KSS82_05710 PF10675 Protein of unknown function (DUF2489) KSS82_05715 PF04055 Radical SAM superfamily KSS82_05715 PF06969 HemN C-terminal domain KSS82_05720 PF07219 HemY protein N-terminus KSS82_05725 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase KSS82_05730 PF02602 Uroporphyrinogen-III synthase HemD KSS82_05735 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KSS82_05735 PF03900 Porphobilinogen deaminase, C-terminal domain KSS82_05740 PF01295 Adenylate cyclase, class-I KSS82_05740 PF12633 Adenylate cyclase NT domain KSS82_05745 PF01491 Frataxin-like domain KSS82_05755 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KSS82_05755 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KSS82_05760 PF01678 Diaminopimelate epimerase KSS82_05765 PF04340 Protein of unknown function, DUF484 KSS82_05770 PF00589 Phage integrase family KSS82_05770 PF02899 Phage integrase, N-terminal SAM-like domain KSS82_05775 PF13419 Haloacid dehalogenase-like hydrolase KSS82_05780 PF00990 Diguanylate cyclase, GGDEF domain KSS82_05780 PF00563 EAL domain KSS82_05780 PF08495 FIST N domain KSS82_05780 PF10442 FIST C domain KSS82_05800 PF12146 Serine aminopeptidase, S33 KSS82_05805 PF01810 LysE type translocator KSS82_05810 PF00563 EAL domain KSS82_05810 PF08668 HDOD domain KSS82_05815 PF00210 Ferritin-like domain KSS82_05850 PF00448 SRP54-type protein, GTPase domain KSS82_05850 PF02881 SRP54-type protein, helical bundle domain KSS82_05855 PF00005 ABC transporter KSS82_05860 PF18075 FtsX extracellular domain KSS82_05865 PF04542 Sigma-70 region 2 KSS82_05865 PF00140 Sigma-70 factor, region 1.2 KSS82_05865 PF04545 Sigma-70, region 4 KSS82_05870 PF07992 Pyridine nucleotide-disulphide oxidoreductase KSS82_05870 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KSS82_05875 PF00440 Bacterial regulatory proteins, tetR family KSS82_05885 PF05958 tRNA (Uracil-5-)-methyltransferase KSS82_05890 PF07715 TonB-dependent Receptor Plug Domain KSS82_05890 PF00593 TonB dependent receptor KSS82_05900 PF01177 Asp/Glu/Hydantoin racemase KSS82_05970 PF00962 Adenosine/AMP deaminase KSS82_05975 PF13188 PAS domain KSS82_05975 PF03707 Bacterial signalling protein N terminal repeat KSS82_05975 PF00990 Diguanylate cyclase, GGDEF domain KSS82_05975 PF00563 EAL domain KSS82_05980 PF00072 Response regulator receiver domain KSS82_05980 PF00158 Sigma-54 interaction domain KSS82_05980 PF02954 Bacterial regulatory protein, Fis family KSS82_05985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSS82_05985 PF00512 His Kinase A (phospho-acceptor) domain KSS82_05985 PF00989 PAS fold KSS82_05995 PF00120 Glutamine synthetase, catalytic domain KSS82_05995 PF03951 Glutamine synthetase, beta-Grasp domain KSS82_06005 PF03144 Elongation factor Tu domain 2 KSS82_06005 PF00679 Elongation factor G C-terminus KSS82_06005 PF00009 Elongation factor Tu GTP binding domain KSS82_06015 PF03631 Virulence factor BrkB KSS82_06020 PF02580 D-Tyr-tRNA(Tyr) deacylase KSS82_06025 PF09500 Putative thioesterase (yiiD_Cterm) KSS82_06025 PF00583 Acetyltransferase (GNAT) family KSS82_06035 PF01293 Phosphoenolpyruvate carboxykinase KSS82_06040 PF01430 Hsp33 protein KSS82_06045 PF01479 S4 domain KSS82_06050 PF11356 Type II secretion system protein C KSS82_06055 PF00263 Bacterial type II and III secretion system protein KSS82_06055 PF03958 Bacterial type II/III secretion system short domain KSS82_06060 PF00437 Type II/IV secretion system protein KSS82_06065 PF00482 Type II secretion system (T2SS), protein F KSS82_06070 PF08334 Type II secretion system (T2SS), protein G KSS82_06070 PF07963 Prokaryotic N-terminal methylation motif KSS82_06075 PF12019 Type II transport protein GspH KSS82_06080 PF02501 Type II secretion system (T2SS), protein I KSS82_06080 PF07963 Prokaryotic N-terminal methylation motif KSS82_06085 PF07963 Prokaryotic N-terminal methylation motif KSS82_06085 PF11612 Type II secretion system (T2SS), protein J KSS82_06090 PF03934 Type II secretion system (T2SS), protein K KSS82_06095 PF12693 GspL periplasmic domain KSS82_06095 PF05134 Type II secretion system (T2SS), protein L KSS82_06100 PF04612 Type II secretion system (T2SS), protein M KSS82_06105 PF01203 Type II secretion system (T2SS), protein N KSS82_06110 PF00459 Inositol monophosphatase family KSS82_06115 PF00293 NUDIX domain KSS82_06120 PF01521 Iron-sulphur cluster biosynthesis KSS82_06120 PF01106 NifU-like domain KSS82_06125 PF00156 Phosphoribosyl transferase domain KSS82_06135 PF00561 alpha/beta hydrolase fold KSS82_06145 PF17674 HHH domain KSS82_06145 PF00575 S1 RNA binding domain KSS82_06145 PF09371 Tex-like protein N-terminal domain KSS82_06145 PF16921 Tex protein YqgF-like domain KSS82_06205 PF08494 DEAD/H associated KSS82_06205 PF00271 Helicase conserved C-terminal domain KSS82_06205 PF00270 DEAD/DEAH box helicase KSS82_06245 PF04851 Type III restriction enzyme, res subunit KSS82_06255 PF01272 Transcription elongation factor, GreA/GreB, C-term KSS82_06255 PF03449 Transcription elongation factor, N-terminal KSS82_06280 PF00486 Transcriptional regulatory protein, C terminal KSS82_06280 PF00072 Response regulator receiver domain KSS82_06285 PF00672 HAMP domain KSS82_06285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSS82_06285 PF00512 His Kinase A (phospho-acceptor) domain KSS82_06290 PF00860 Permease family KSS82_06295 PF00270 DEAD/DEAH box helicase KSS82_06295 PF00271 Helicase conserved C-terminal domain KSS82_06295 PF17191 RecG wedge domain KSS82_06300 PF04607 Region found in RelA / SpoT proteins KSS82_06300 PF13291 ACT domain KSS82_06300 PF02824 TGS domain KSS82_06305 PF01192 RNA polymerase Rpb6 KSS82_06310 PF00625 Guanylate kinase KSS82_06315 PF02592 Putative vitamin uptake transporter KSS82_06320 PF00474 Sodium:solute symporter family KSS82_06330 PF03471 Transporter associated domain KSS82_06330 PF00999 Sodium/hydrogen exchanger family KSS82_06330 PF02080 TrkA-C domain KSS82_06335 PF00196 Bacterial regulatory proteins, luxR family KSS82_06335 PF00072 Response regulator receiver domain KSS82_06340 PF02683 Cytochrome C biogenesis protein transmembrane region KSS82_06340 PF11412 Disulphide bond corrector protein DsbC KSS82_06345 PF03605 Anaerobic c4-dicarboxylate membrane transporter KSS82_06350 PF00206 Lyase KSS82_06350 PF10415 Fumarase C C-terminus KSS82_06355 PF04186 FxsA cytoplasmic membrane protein KSS82_06360 PF00588 SpoU rRNA Methylase family KSS82_06365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSS82_06365 PF00512 His Kinase A (phospho-acceptor) domain KSS82_06365 PF16527 Two-component sensor protein CpxA, periplasmic domain KSS82_06365 PF00672 HAMP domain KSS82_06370 PF00072 Response regulator receiver domain KSS82_06370 PF00486 Transcriptional regulatory protein, C terminal KSS82_06380 PF01545 Cation efflux family KSS82_06380 PF16916 Dimerisation domain of Zinc Transporter KSS82_06385 PF00365 Phosphofructokinase KSS82_06390 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded KSS82_06395 PF06005 Cell division protein ZapB KSS82_06400 PF02219 Methylenetetrahydrofolate reductase KSS82_06405 PF00696 Amino acid kinase family KSS82_06405 PF00742 Homoserine dehydrogenase KSS82_06405 PF03447 Homoserine dehydrogenase, NAD binding domain KSS82_06410 PF01053 Cys/Met metabolism PLP-dependent enzyme KSS82_06415 PF01340 Met Apo-repressor, MetJ KSS82_06420 PF00390 Malic enzyme, N-terminal domain KSS82_06420 PF03949 Malic enzyme, NAD binding domain KSS82_06425 PF01197 Ribosomal protein L31 KSS82_06430 PF00270 DEAD/DEAH box helicase KSS82_06430 PF00271 Helicase conserved C-terminal domain KSS82_06430 PF18074 Primosomal protein N C-terminal domain KSS82_06430 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KSS82_06430 PF17764 3′ DNA-binding domain (3′BD) KSS82_06435 PF00356 Bacterial regulatory proteins, lacI family KSS82_06440 PF05036 Sporulation related domain KSS82_06445 PF00227 Proteasome subunit KSS82_06450 PF00004 ATPase family associated with various cellular activities (AAA) KSS82_06450 PF07724 AAA domain (Cdc48 subfamily) KSS82_06450 PF10431 C-terminal, D2-small domain, of ClpB protein KSS82_06455 PF01040 UbiA prenyltransferase family KSS82_06460 PF03737 Aldolase/RraA KSS82_06465 PF01554 MatE KSS82_06470 PF00121 Triosephosphate isomerase KSS82_06490 PF00455 DeoR C terminal sensor domain KSS82_06490 PF08220 DeoR-like helix-turn-helix domain KSS82_06495 PF00166 Chaperonin 10 Kd subunit KSS82_06500 PF00118 TCP-1/cpn60 chaperonin family KSS82_06510 PF04055 Radical SAM superfamily KSS82_06515 PF09285 Elongation factor P, C-terminal KSS82_06515 PF01132 Elongation factor P (EF-P) OB domain KSS82_06515 PF08207 Elongation factor P (EF-P) KOW-like domain KSS82_06520 PF02313 Fumarate reductase subunit D KSS82_06525 PF02300 Fumarate reductase subunit C KSS82_06530 PF13085 2Fe-2S iron-sulfur cluster binding domain KSS82_06530 PF13183 4Fe-4S dicluster domain KSS82_06535 PF00890 FAD binding domain KSS82_06535 PF02910 Fumarate reductase flavoprotein C-term KSS82_06540 PF00152 tRNA synthetases class II (D, K and N) KSS82_06545 PF00581 Rhodanese-like domain KSS82_06550 PF02556 Preprotein translocase subunit SecB KSS82_06555 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KSS82_06555 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KSS82_06560 PF00132 Bacterial transferase hexapeptide (six repeats) KSS82_06560 PF06426 Serine acetyltransferase, N-terminal KSS82_06570 PF00311 Phosphoenolpyruvate carboxylase KSS82_06575 PF01546 Peptidase family M20/M25/M40 KSS82_06575 PF07687 Peptidase dimerisation domain KSS82_06580 PF01118 Semialdehyde dehydrogenase, NAD binding domain KSS82_06580 PF02774 Semialdehyde dehydrogenase, dimerisation domain KSS82_06585 PF00696 Amino acid kinase family KSS82_06590 PF00764 Arginosuccinate synthase KSS82_06595 PF14698 Argininosuccinate lyase C-terminal KSS82_06595 PF00206 Lyase KSS82_06605 PF07992 Pyridine nucleotide-disulphide oxidoreductase KSS82_06605 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KSS82_06610 PF00462 Glutaredoxin KSS82_06610 PF08534 Redoxin KSS82_06615 PF03466 LysR substrate binding domain KSS82_06615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSS82_06620 PF00905 Penicillin binding protein transpeptidase domain KSS82_06620 PF17092 Penicillin-binding protein OB-like domain KSS82_06620 PF00912 Transglycosylase KSS82_06640 PF04351 Pilus assembly protein, PilP KSS82_06645 PF11741 AMIN domain KSS82_06645 PF00263 Bacterial type II and III secretion system protein KSS82_06645 PF03958 Bacterial type II/III secretion system short domain KSS82_06645 PF07660 Secretin and TonB N terminus short domain KSS82_06650 PF01202 Shikimate kinase KSS82_06655 PF01761 3-dehydroquinate synthase KSS82_06665 PF02086 D12 class N6 adenine-specific DNA methyltransferase KSS82_06670 PF00834 Ribulose-phosphate 3 epimerase family KSS82_06675 PF13419 Haloacid dehalogenase-like hydrolase KSS82_06680 PF00579 tRNA synthetases class I (W and Y) KSS82_06705 PF18693 TRAM domain KSS82_06705 PF00919 Uncharacterized protein family UPF0004 KSS82_06705 PF04055 Radical SAM superfamily KSS82_06710 PF07992 Pyridine nucleotide-disulphide oxidoreductase KSS82_06715 PF00117 Glutamine amidotransferase class-I KSS82_06720 PF00202 Aminotransferase class-III KSS82_06725 PF04958 Arginine N-succinyltransferase beta subunit KSS82_06730 PF00171 Aldehyde dehydrogenase family KSS82_06740 PF00027 Cyclic nucleotide-binding domain KSS82_06740 PF13545 Crp-like helix-turn-helix domain KSS82_06745 PF00485 Phosphoribulokinase / Uridine kinase family KSS82_06750 PF06794 Uncharacterised protein family (UPF0270) KSS82_06755 PF00561 alpha/beta hydrolase fold KSS82_06765 PF00005 ABC transporter KSS82_06765 PF12848 ABC transporter KSS82_06770 PF02525 Flavodoxin-like fold KSS82_06775 PF02254 TrkA-N domain KSS82_06775 PF00999 Sodium/hydrogen exchanger family KSS82_06785 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KSS82_06800 PF01112 Asparaginase KSS82_06805 PF00709 Adenylosuccinate synthetase KSS82_06810 PF08238 Sel1 repeat KSS82_06815 PF11893 Domain of unknown function (DUF3413) KSS82_06815 PF00884 Sulfatase KSS82_06820 PF00575 S1 RNA binding domain KSS82_06820 PF00773 RNB domain KSS82_06820 PF17876 Cold shock domain KSS82_06820 PF08461 Ribonuclease R winged-helix domain KSS82_06820 PF08206 Ribonuclease B OB domain KSS82_06825 PF00588 SpoU rRNA Methylase family KSS82_06825 PF08032 RNA 2'-O ribose methyltransferase substrate binding KSS82_06830 PF00338 Ribosomal protein S10p/S20e KSS82_06835 PF00297 Ribosomal protein L3 KSS82_06840 PF00573 Ribosomal protein L4/L1 family KSS82_06845 PF00276 Ribosomal protein L23 KSS82_06850 PF00181 Ribosomal Proteins L2, RNA binding domain KSS82_06850 PF03947 Ribosomal Proteins L2, C-terminal domain KSS82_06855 PF00203 Ribosomal protein S19 KSS82_06860 PF00237 Ribosomal protein L22p/L17e KSS82_06865 PF00189 Ribosomal protein S3, C-terminal domain KSS82_06865 PF07650 KH domain KSS82_06870 PF00252 Ribosomal protein L16p/L10e KSS82_06875 PF00831 Ribosomal L29 protein KSS82_06880 PF00366 Ribosomal protein S17 KSS82_06885 PF00238 Ribosomal protein L14p/L23e KSS82_06890 PF00467 KOW motif KSS82_06890 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KSS82_06895 PF00281 Ribosomal protein L5 KSS82_06895 PF00673 ribosomal L5P family C-terminus KSS82_06900 PF00253 Ribosomal protein S14p/S29e KSS82_06905 PF00410 Ribosomal protein S8 KSS82_06910 PF00347 Ribosomal protein L6 KSS82_06915 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KSS82_06920 PF00333 Ribosomal protein S5, N-terminal domain KSS82_06920 PF03719 Ribosomal protein S5, C-terminal domain KSS82_06925 PF00327 Ribosomal protein L30p/L7e KSS82_06930 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KSS82_06935 PF00344 SecY translocase KSS82_06940 PF00444 Ribosomal protein L36 KSS82_06945 PF00416 Ribosomal protein S13/S18 KSS82_06950 PF00411 Ribosomal protein S11 KSS82_06955 PF00163 Ribosomal protein S4/S9 N-terminal domain KSS82_06955 PF01479 S4 domain KSS82_06960 PF01000 RNA polymerase Rpb3/RpoA insert domain KSS82_06960 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KSS82_06960 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KSS82_06965 PF01196 Ribosomal protein L17 KSS82_06975 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KSS82_06975 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KSS82_06980 PF08525 Opacity-associated protein A N-terminal motif KSS82_06980 PF04225 Opacity-associated protein A LysM-like domain KSS82_06985 PF13673 Acetyltransferase (GNAT) domain KSS82_06990 PF00271 Helicase conserved C-terminal domain KSS82_06990 PF00270 DEAD/DEAH box helicase KSS82_06990 PF03880 DbpA RNA binding domain KSS82_07000 PF00149 Calcineurin-like phosphoesterase KSS82_07000 PF02872 5'-nucleotidase, C-terminal domain KSS82_07005 PF14824 Sirohaem biosynthesis protein central KSS82_07005 PF10414 Sirohaem synthase dimerisation region KSS82_07005 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KSS82_07010 PF01507 Phosphoadenosine phosphosulfate reductase family KSS82_07015 PF00009 Elongation factor Tu GTP binding domain KSS82_07040 PF00005 ABC transporter KSS82_07050 PF10795 Protein of unknown function (DUF2607) KSS82_07055 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) KSS82_07060 PF01625 Peptide methionine sulfoxide reductase KSS82_07065 PF01103 Surface antigen KSS82_07065 PF07244 Surface antigen variable number repeat KSS82_07065 PF17243 POTRA domain TamA domain 1 KSS82_07070 PF04357 TamB, inner membrane protein subunit of TAM complex KSS82_07075 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like KSS82_07085 PF00719 Inorganic pyrophosphatase KSS82_07090 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain KSS82_07095 PF01225 Mur ligase family, catalytic domain KSS82_07095 PF02875 Mur ligase family, glutamate ligase domain KSS82_07095 PF08245 Mur ligase middle domain KSS82_07100 PF02441 Flavoprotein KSS82_07110 PF00528 Binding-protein-dependent transport system inner membrane component KSS82_07115 PF00005 ABC transporter KSS82_07120 PF04751 Protein of unknown function (DUF615) KSS82_07125 PF01523 Putative modulator of DNA gyrase KSS82_07130 PF00571 CBS domain KSS82_07130 PF01769 Divalent cation transporter KSS82_07130 PF03448 MgtE intracellular N domain KSS82_07135 PF00381 PTS HPr component phosphorylation site KSS82_07140 PF03668 P-loop ATPase protein family KSS82_07145 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KSS82_07150 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KSS82_07155 PF00309 Sigma-54 factor, Activator interacting domain (AID) KSS82_07155 PF04963 Sigma-54 factor, core binding domain KSS82_07155 PF04552 Sigma-54, DNA binding domain KSS82_07160 PF00005 ABC transporter KSS82_07160 PF12399 Branched-chain amino acid ATP-binding cassette transporter KSS82_07165 PF03968 OstA-like protein KSS82_07180 PF00571 CBS domain KSS82_07180 PF01380 SIS domain KSS82_07185 PF01699 Sodium/calcium exchanger protein KSS82_07190 PF00005 ABC transporter KSS82_07195 PF02405 Permease MlaE KSS82_07200 PF02470 MlaD protein KSS82_07205 PF05494 MlaC protein KSS82_07215 PF01722 BolA-like protein KSS82_07220 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KSS82_07225 PF01553 Acyltransferase KSS82_07230 PF01042 Endoribonuclease L-PSP KSS82_07235 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain KSS82_07235 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain KSS82_07240 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KSS82_07240 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KSS82_07245 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KSS82_07245 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KSS82_07250 PF02562 PhoH-like protein KSS82_07250 PF13638 PIN domain KSS82_07255 PF18337 RapA N-terminal Tudor like domain KSS82_07255 PF18339 RapA N-terminal Tudor like domain 1 KSS82_07255 PF00271 Helicase conserved C-terminal domain KSS82_07255 PF12137 RNA polymerase recycling family C-terminal KSS82_07255 PF00176 SNF2 family N-terminal domain KSS82_07260 PF00849 RNA pseudouridylate synthase KSS82_07265 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KSS82_07265 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KSS82_07270 PF05987 Bacterial protein of unknown function (DUF898) KSS82_07280 PF00133 tRNA synthetases class I (I, L, M and V) KSS82_07280 PF08264 Anticodon-binding domain of tRNA KSS82_07280 PF10458 Valyl tRNA synthetase tRNA binding arm KSS82_07285 PF04364 DNA polymerase III chi subunit, HolC KSS82_07290 PF00883 Cytosol aminopeptidase family, catalytic domain KSS82_07290 PF02789 Cytosol aminopeptidase family, N-terminal domain KSS82_07295 PF03739 Lipopolysaccharide export system permease LptF/LptG KSS82_07300 PF03739 Lipopolysaccharide export system permease LptF/LptG KSS82_07315 PF00072 Response regulator receiver domain KSS82_07320 PF00672 HAMP domain KSS82_07320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KSS82_07365 PF00694 Aconitase C-terminal domain KSS82_07370 PF00330 Aconitase family (aconitate hydratase) KSS82_07375 PF00180 Isocitrate/isopropylmalate dehydrogenase KSS82_07380 PF08502 LeuA allosteric (dimerisation) domain KSS82_07380 PF00682 HMGL-like KSS82_07400 PF03466 LysR substrate binding domain KSS82_07400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSS82_07405 PF00501 AMP-binding enzyme KSS82_07410 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KSS82_07410 PF00205 Thiamine pyrophosphate enzyme, central domain KSS82_07410 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KSS82_07415 PF10369 Small subunit of acetolactate synthase KSS82_07420 PF01842 ACT domain KSS82_07420 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KSS82_07420 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KSS82_07425 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KSS82_07430 PF01812 5-formyltetrahydrofolate cyclo-ligase family KSS82_07440 PF05164 Cell division protein ZapA KSS82_07445 PF03695 Uncharacterised protein family (UPF0149) KSS82_07450 PF01494 FAD binding domain KSS82_07455 PF01494 FAD binding domain KSS82_07470 PF03937 Flavinator of succinate dehydrogenase KSS82_07480 PF02910 Fumarate reductase flavoprotein C-term KSS82_07480 PF00890 FAD binding domain KSS82_07485 PF04542 Sigma-70 region 2 KSS82_07485 PF08281 Sigma-70, region 4 KSS82_07490 PF03873 Anti sigma-E protein RseA, C-terminal domain KSS82_07490 PF03872 Anti sigma-E protein RseA, N-terminal domain KSS82_07495 PF17188 MucB/RseB C-terminal domain KSS82_07495 PF03888 MucB/RseB N-terminal domain KSS82_07505 PF00679 Elongation factor G C-terminus KSS82_07505 PF06421 GTP-binding protein LepA C-terminus KSS82_07505 PF03144 Elongation factor Tu domain 2 KSS82_07505 PF00009 Elongation factor Tu GTP binding domain KSS82_07510 PF10502 Signal peptidase, peptidase S26 KSS82_07515 PF14622 Ribonuclease-III-like KSS82_07515 PF00035 Double-stranded RNA binding motif KSS82_07520 PF01926 50S ribosome-binding GTPase KSS82_07520 PF07650 KH domain KSS82_07525 PF11967 Recombination protein O N terminal KSS82_07525 PF02565 Recombination protein O C terminal KSS82_07530 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ KSS82_07535 PF01648 4'-phosphopantetheinyl transferase superfamily KSS82_07550 PF00990 Diguanylate cyclase, GGDEF domain KSS82_07555 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KSS82_07555 PF01627 Hpt domain KSS82_07555 PF00672 HAMP domain KSS82_07555 PF00512 His Kinase A (phospho-acceptor) domain KSS82_07555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSS82_07555 PF00072 Response regulator receiver domain KSS82_07560 PF01938 TRAM domain KSS82_07560 PF05958 tRNA (Uracil-5-)-methyltransferase KSS82_07565 PF02824 TGS domain KSS82_07565 PF13291 ACT domain KSS82_07565 PF04607 Region found in RelA / SpoT proteins KSS82_07570 PF03819 MazG nucleotide pyrophosphohydrolase domain KSS82_07575 PF06418 CTP synthase N-terminus KSS82_07575 PF00117 Glutamine amidotransferase class-I KSS82_07580 PF00113 Enolase, C-terminal TIM barrel domain KSS82_07580 PF03952 Enolase, N-terminal domain KSS82_07585 PF12627 Probable RNA and SrmB- binding site of polymerase A KSS82_07585 PF01743 Poly A polymerase head domain KSS82_07585 PF01966 HD domain KSS82_07590 PF13401 AAA domain KSS82_07590 PF01471 Putative peptidoglycan binding domain KSS82_07600 PF08239 Bacterial SH3 domain KSS82_07605 PF01384 Phosphate transporter family KSS82_07610 PF01865 Protein of unknown function DUF47 KSS82_07615 PF01928 CYTH domain KSS82_07620 PF07885 Ion channel KSS82_07625 PF02743 Cache domain KSS82_07625 PF00672 HAMP domain KSS82_07625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KSS82_07630 PF08335 GlnD PII-uridylyltransferase KSS82_07630 PF03710 Glutamate-ammonia ligase adenylyltransferase KSS82_07635 PF01467 Cytidylyltransferase-like KSS82_07635 PF00294 pfkB family carbohydrate kinase KSS82_07640 PF02321 Outer membrane efflux protein KSS82_07645 PF00293 NUDIX domain KSS82_07650 PF06853 Protein of unknown function (DUF1249) KSS82_07655 PF00149 Calcineurin-like phosphoesterase KSS82_07660 PF05728 Uncharacterised protein family (UPF0227) KSS82_07665 PF00204 DNA gyrase B KSS82_07665 PF00986 DNA gyrase B subunit, carboxyl terminus KSS82_07665 PF01751 Toprim domain KSS82_07665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSS82_07670 PF03989 DNA gyrase C-terminal domain, beta-propeller KSS82_07670 PF00521 DNA gyrase/topoisomerase IV, subunit A KSS82_07675 PF03884 DNA gyrase inhibitor YacG KSS82_07680 PF07072 Cell division protein KSS82_07685 PF01121 Dephospho-CoA kinase KSS82_07690 PF06750 Bacterial Peptidase A24 N-terminal domain KSS82_07690 PF01478 Type IV leader peptidase family KSS82_07695 PF00482 Type II secretion system (T2SS), protein F KSS82_07700 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KSS82_07700 PF00437 Type II/IV secretion system protein KSS82_07705 PF00114 Pilin (bacterial filament) KSS82_07705 PF07963 Prokaryotic N-terminal methylation motif KSS82_07710 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain KSS82_07710 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain KSS82_07715 PF01510 N-acetylmuramoyl-L-alanine amidase KSS82_07720 PF00258 Flavodoxin KSS82_07725 PF02899 Phage integrase, N-terminal SAM-like domain KSS82_07725 PF00589 Phage integrase family KSS82_07730 PF10411 Disulfide bond isomerase protein N-terminus KSS82_07730 PF13098 Thioredoxin-like domain KSS82_07735 PF17768 RecJ OB domain KSS82_07735 PF01368 DHH family KSS82_07735 PF02272 DHHA1 domain KSS82_07740 PF00392 Bacterial regulatory proteins, gntR family KSS82_07740 PF07729 FCD domain KSS82_07745 PF00456 Transketolase, thiamine diphosphate binding domain KSS82_07745 PF17831 Pyruvate dehydrogenase E1 component middle domain KSS82_07750 PF02817 e3 binding domain KSS82_07750 PF00364 Biotin-requiring enzyme KSS82_07750 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KSS82_07755 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KSS82_07755 PF07992 Pyridine nucleotide-disulphide oxidoreductase KSS82_07765 PF01795 MraW methylase family KSS82_07770 PF04999 Cell division protein FtsL KSS82_07775 PF00905 Penicillin binding protein transpeptidase domain KSS82_07775 PF03717 Penicillin-binding Protein dimerisation domain KSS82_07780 PF08245 Mur ligase middle domain KSS82_07780 PF01225 Mur ligase family, catalytic domain KSS82_07780 PF02875 Mur ligase family, glutamate ligase domain KSS82_07785 PF01225 Mur ligase family, catalytic domain KSS82_07785 PF02875 Mur ligase family, glutamate ligase domain KSS82_07785 PF08245 Mur ligase middle domain KSS82_07790 PF00953 Glycosyl transferase family 4 KSS82_07790 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 KSS82_07795 PF08245 Mur ligase middle domain KSS82_07795 PF02875 Mur ligase family, glutamate ligase domain KSS82_07800 PF01098 Cell cycle protein KSS82_07805 PF03033 Glycosyltransferase family 28 N-terminal domain KSS82_07805 PF04101 Glycosyltransferase family 28 C-terminal domain KSS82_07810 PF08245 Mur ligase middle domain KSS82_07810 PF01225 Mur ligase family, catalytic domain KSS82_07810 PF02875 Mur ligase family, glutamate ligase domain KSS82_07815 PF08478 POTRA domain, FtsQ-type KSS82_07815 PF03799 Cell division protein FtsQ KSS82_07820 PF02491 SHS2 domain inserted in FTSA KSS82_07825 PF12327 FtsZ family, C-terminal domain KSS82_07825 PF00091 Tubulin/FtsZ family, GTPase domain KSS82_07830 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase KSS82_07840 PF07517 SecA DEAD-like domain KSS82_07840 PF01043 SecA preprotein cross-linking domain KSS82_07840 PF07516 SecA Wing and Scaffold domain KSS82_07840 PF02810 SEC-C motif KSS82_07845 PF00293 NUDIX domain KSS82_07850 PF05173 Dihydrodipicolinate reductase, C-terminus KSS82_07850 PF01113 Dihydrodipicolinate reductase, N-terminus KSS82_07860 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KSS82_07860 PF00117 Glutamine amidotransferase class-I KSS82_07865 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KSS82_07865 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KSS82_07865 PF02142 MGS-like domain KSS82_07870 PF01925 Sulfite exporter TauE/SafE KSS82_07875 PF03466 LysR substrate binding domain KSS82_07875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSS82_07880 PF03458 UPF0126 domain KSS82_07885 PF01497 Periplasmic binding protein KSS82_07895 PF01048 Phosphorylase superfamily KSS82_07905 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KSS82_07905 PF07992 Pyridine nucleotide-disulphide oxidoreductase KSS82_07910 PF04898 Glutamate synthase central domain KSS82_07910 PF01493 GXGXG motif KSS82_07910 PF00310 Glutamine amidotransferases class-II KSS82_07910 PF01645 Conserved region in glutamate synthase KSS82_07915 PF07992 Pyridine nucleotide-disulphide oxidoreductase KSS82_07915 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KSS82_07920 PF01493 GXGXG motif KSS82_07920 PF01645 Conserved region in glutamate synthase KSS82_07920 PF04898 Glutamate synthase central domain KSS82_07920 PF00310 Glutamine amidotransferases class-II KSS82_07925 PF16199 Radical_SAM C-terminal domain KSS82_07925 PF04055 Radical SAM superfamily KSS82_07930 PF01590 GAF domain KSS82_07930 PF00563 EAL domain KSS82_07930 PF00990 Diguanylate cyclase, GGDEF domain KSS82_07930 PF00360 Phytochrome region KSS82_07935 PF01627 Hpt domain KSS82_07935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSS82_07935 PF18415 Histidine kinase receptor ArcB trans-membrane domain KSS82_07935 PF00072 Response regulator receiver domain KSS82_07935 PF00989 PAS fold KSS82_07935 PF00512 His Kinase A (phospho-acceptor) domain KSS82_07940 PF00072 Response regulator receiver domain KSS82_07940 PF00486 Transcriptional regulatory protein, C terminal KSS82_07950 PF03737 Aldolase/RraA KSS82_07965 PF00696 Amino acid kinase family KSS82_07965 PF03447 Homoserine dehydrogenase, NAD binding domain KSS82_07965 PF13840 ACT domain KSS82_07965 PF01842 ACT domain KSS82_07965 PF00742 Homoserine dehydrogenase KSS82_07970 PF00288 GHMP kinases N terminal domain KSS82_07970 PF08544 GHMP kinases C terminal KSS82_07975 PF00291 Pyridoxal-phosphate dependent enzyme KSS82_07975 PF14821 Threonine synthase N terminus KSS82_07980 PF01228 Glycine radical KSS82_07985 PF01261 Xylose isomerase-like TIM barrel KSS82_07990 PF03167 Uracil DNA glycosylase superfamily KSS82_08005 PF01235 Sodium:alanine symporter family KSS82_08010 PF03883 Peroxide stress protein YaaA KSS82_08020 PF01026 TatD related DNase KSS82_08025 PF01773 Na+ dependent nucleoside transporter N-terminus KSS82_08025 PF07662 Na+ dependent nucleoside transporter C-terminus KSS82_08025 PF07670 Nucleoside recognition KSS82_08035 PF01791 DeoC/LacD family aldolase KSS82_08040 PF02885 Glycosyl transferase family, helical bundle domain KSS82_08040 PF00591 Glycosyl transferase family, a/b domain KSS82_08040 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain KSS82_08045 PF01676 Metalloenzyme superfamily KSS82_08050 PF01048 Phosphorylase superfamily KSS82_08060 PF18429 Domain of unknown function (DUF5609) KSS82_08070 PF18073 Rubredoxin metal binding domain KSS82_08075 PF00009 Elongation factor Tu GTP binding domain KSS82_08075 PF03144 Elongation factor Tu domain 2 KSS82_08075 PF00679 Elongation factor G C-terminus KSS82_08075 PF03764 Elongation factor G, domain IV KSS82_08075 PF14492 Elongation Factor G, domain II KSS82_08080 PF00501 AMP-binding enzyme KSS82_08085 PF00072 Response regulator receiver domain KSS82_08095 PF16353 Domain of unknown function(DUF4981) KSS82_08095 PF02929 Beta galactosidase small chain KSS82_08095 PF02837 Glycosyl hydrolases family 2, sugar binding domain KSS82_08095 PF02836 Glycosyl hydrolases family 2, TIM barrel domain KSS82_08095 PF00703 Glycosyl hydrolases family 2 KSS82_08100 PF00356 Bacterial regulatory proteins, lacI family KSS82_08105 PF01588 Putative tRNA binding domain KSS82_08115 PF01544 CorA-like Mg2+ transporter protein KSS82_08125 PF00583 Acetyltransferase (GNAT) family KSS82_08135 PF14602 Hexapeptide repeat of succinyl-transferase KSS82_08135 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle KSS82_08140 PF07130 YebG protein KSS82_08145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSS82_08145 PF03466 LysR substrate binding domain KSS82_08165 PF17946 RecC C-terminal domain KSS82_08170 PF00580 UvrD/REP helicase N-terminal domain KSS82_08170 PF12705 PD-(D/E)XK nuclease superfamily KSS82_08170 PF13361 UvrD-like helicase C-terminal domain KSS82_08175 PF13538 UvrD-like helicase C-terminal domain KSS82_08185 PF00696 Amino acid kinase family KSS82_08185 PF00583 Acetyltransferase (GNAT) family KSS82_08195 PF06725 3D domain KSS82_08195 PF03562 MltA specific insert domain KSS82_08200 PF00899 ThiF family KSS82_08205 PF02657 Fe-S metabolism associated domain KSS82_08210 PF00266 Aminotransferase class-V KSS82_08215 PF01965 DJ-1/PfpI family KSS82_08220 PF02558 Ketopantoate reductase PanE/ApbA KSS82_08220 PF08546 Ketopantoate reductase PanE/ApbA C terminal KSS82_08225 PF03502 Nucleoside-specific channel-forming protein, Tsx KSS82_08235 PF04545 Sigma-70, region 4 KSS82_08235 PF04542 Sigma-70 region 2 KSS82_08245 PF07690 Major Facilitator Superfamily KSS82_08250 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KSS82_08260 PF05175 Methyltransferase small domain KSS82_08265 PF01722 BolA-like protein KSS82_08270 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) KSS82_08270 PF11973 NQRA C-terminal domain KSS82_08275 PF03116 NQR2, RnfD, RnfE family KSS82_08280 PF04205 FMN-binding domain KSS82_08285 PF02508 Rnf-Nqr subunit, membrane protein KSS82_08290 PF02508 Rnf-Nqr subunit, membrane protein KSS82_08295 PF00111 2Fe-2S iron-sulfur cluster binding domain KSS82_08295 PF00175 Oxidoreductase NAD-binding domain KSS82_08295 PF00970 Oxidoreductase FAD-binding domain KSS82_08300 PF02424 ApbE family KSS82_08310 PF00817 impB/mucB/samB family KSS82_08310 PF11798 IMS family HHH motif KSS82_08320 PF00990 Diguanylate cyclase, GGDEF domain KSS82_08320 PF17158 Membrane-associated sensor, integral membrane domain KSS82_08325 PF00209 Sodium:neurotransmitter symporter family KSS82_08335 PF08443 RimK-like ATP-grasp domain KSS82_08335 PF18030 RimK PreATP-grasp domain KSS82_08340 PF18030 RimK PreATP-grasp domain KSS82_08340 PF08443 RimK-like ATP-grasp domain KSS82_08345 PF07687 Peptidase dimerisation domain KSS82_08345 PF01546 Peptidase family M20/M25/M40 KSS82_08350 PF00860 Permease family KSS82_08355 PF00156 Phosphoribosyl transferase domain KSS82_08360 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) KSS82_08365 PF07417 Sigma factor-binding transcriptional regulator Crl KSS82_08370 PF00696 Amino acid kinase family KSS82_08370 PF01472 PUA domain KSS82_08375 PF00171 Aldehyde dehydrogenase family KSS82_08380 PF03477 ATP cone domain KSS82_08385 PF01872 RibD C-terminal domain KSS82_08385 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KSS82_08390 PF00677 Lumazine binding domain KSS82_08395 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KSS82_08395 PF00925 GTP cyclohydrolase II KSS82_08400 PF00885 6,7-dimethyl-8-ribityllumazine synthase KSS82_08405 PF01029 NusB family KSS82_08410 PF00586 AIR synthase related protein, N-terminal domain KSS82_08410 PF02769 AIR synthase related protein, C-terminal domain KSS82_08415 PF04608 Phosphatidylglycerophosphatase A KSS82_08420 PF11944 Protein of unknown function (DUF3461) KSS82_08425 PF01966 HD domain KSS82_08425 PF08335 GlnD PII-uridylyltransferase KSS82_08425 PF01909 Nucleotidyltransferase domain KSS82_08430 PF00557 Metallopeptidase family M24 KSS82_08435 PF00318 Ribosomal protein S2 KSS82_08440 PF00889 Elongation factor TS KSS82_08445 PF00696 Amino acid kinase family KSS82_08450 PF01765 Ribosome recycling factor KSS82_08455 PF01255 Putative undecaprenyl diphosphate synthase KSS82_08465 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KSS82_08465 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KSS82_08465 PF13288 DXP reductoisomerase C-terminal domain KSS82_08470 PF02163 Peptidase family M50 KSS82_08470 PF17820 PDZ domain KSS82_08475 PF01103 Surface antigen KSS82_08475 PF07244 Surface antigen variable number repeat KSS82_08480 PF03938 Outer membrane protein (OmpH-like) KSS82_08485 PF00132 Bacterial transferase hexapeptide (six repeats) KSS82_08485 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD KSS82_08490 PF07977 FabA-like domain KSS82_08495 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 KSS82_08495 PF00132 Bacterial transferase hexapeptide (six repeats) KSS82_08500 PF02684 Lipid-A-disaccharide synthetase KSS82_08505 PF01351 Ribonuclease HII KSS82_08510 PF07733 Bacterial DNA polymerase III alpha NTPase domain KSS82_08510 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KSS82_08510 PF14579 Helix-hairpin-helix motif KSS82_08510 PF02811 PHP domain KSS82_08510 PF01336 OB-fold nucleic acid binding domain KSS82_08515 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KSS82_08520 PF11734 TilS substrate C-terminal domain KSS82_08520 PF09179 TilS substrate binding domain KSS82_08520 PF01171 PP-loop family KSS82_08525 PF00034 Cytochrome c KSS82_08530 PF05870 Phenolic acid decarboxylase (PAD) KSS82_08535 PF00543 Nitrogen regulatory protein P-II KSS82_08540 PF03372 Endonuclease/Exonuclease/phosphatase family KSS82_08545 PF01476 LysM domain KSS82_08545 PF01464 Transglycosylase SLT domain KSS82_08550 PF00753 Metallo-beta-lactamase superfamily KSS82_08550 PF16123 Hydroxyacylglutathione hydrolase C-terminus KSS82_08555 PF08241 Methyltransferase domain KSS82_08560 PF00075 RNase H KSS82_08565 PF00929 Exonuclease KSS82_08575 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KSS82_08575 PF02770 Acyl-CoA dehydrogenase, middle domain KSS82_08575 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KSS82_08575 PF09317 Domain of unknown function (DUF1974) KSS82_08580 PF13580 SIS domain KSS82_08585 PF13230 Glutamine amidotransferases class-II KSS82_08590 PF00551 Formyl transferase KSS82_08595 PF00586 AIR synthase related protein, N-terminal domain KSS82_08595 PF02769 AIR synthase related protein, C-terminal domain KSS82_08605 PF00849 RNA pseudouridylate synthase KSS82_08605 PF01479 S4 domain KSS82_08610 PF01713 Smr domain KSS82_08630 PF03173 Putative carbohydrate binding domain KSS82_08630 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain KSS82_08630 PF00728 Glycosyl hydrolase family 20, catalytic domain KSS82_08630 PF02838 Glycosyl hydrolase family 20, domain 2 KSS82_08640 PF00403 Heavy-metal-associated domain KSS82_08645 PF00749 tRNA synthetases class I (E and Q), catalytic domain KSS82_08650 PF01389 OmpA-like transmembrane domain KSS82_08650 PF00691 OmpA family KSS82_08695 PF00072 Response regulator receiver domain KSS82_08695 PF01584 CheW-like domain KSS82_08700 PF03705 CheR methyltransferase, all-alpha domain KSS82_08700 PF01739 CheR methyltransferase, SAM binding domain KSS82_08705 PF00460 Flagella basal body rod protein KSS82_08710 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KSS82_08710 PF00460 Flagella basal body rod protein KSS82_08715 PF03963 Flagellar hook capping protein - N-terminal region KSS82_08715 PF13860 FlgD Ig-like domain KSS82_08715 PF13861 FlgD Tudor-like domain KSS82_08720 PF07559 Flagellar basal body protein FlaE KSS82_08720 PF00460 Flagella basal body rod protein KSS82_08720 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KSS82_08725 PF00460 Flagella basal body rod protein KSS82_08725 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KSS82_08730 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KSS82_08730 PF00460 Flagella basal body rod protein KSS82_08735 PF02107 Flagellar L-ring protein KSS82_08740 PF02119 Flagellar P-ring protein KSS82_08745 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase KSS82_08745 PF10135 Rod binding protein KSS82_08750 PF07196 Flagellin hook IN motif KSS82_08750 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KSS82_08760 PF07196 Flagellin hook IN motif KSS82_08760 PF00669 Bacterial flagellin N-terminal helical region KSS82_08760 PF00700 Bacterial flagellin C-terminal helical region KSS82_08765 PF02899 Phage integrase, N-terminal SAM-like domain KSS82_08765 PF00589 Phage integrase family KSS82_08830 PF05840 Bacteriophage replication gene A protein (GPA) KSS82_09010 PF00700 Bacterial flagellin C-terminal helical region KSS82_09010 PF07196 Flagellin hook IN motif KSS82_09010 PF00669 Bacterial flagellin N-terminal helical region KSS82_09095 PF01926 50S ribosome-binding GTPase KSS82_09095 PF06071 Protein of unknown function (DUF933) KSS82_09100 PF01195 Peptidyl-tRNA hydrolase KSS82_09105 PF14572 Phosphoribosyl synthetase-associated domain KSS82_09105 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KSS82_09110 PF00288 GHMP kinases N terminal domain KSS82_09110 PF08544 GHMP kinases C terminal KSS82_09115 PF03550 Outer membrane lipoprotein LolB KSS82_09120 PF01488 Shikimate / quinate 5-dehydrogenase KSS82_09120 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KSS82_09120 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KSS82_09125 PF03462 PCRF domain KSS82_09125 PF00472 RF-1 domain KSS82_09130 PF13847 Methyltransferase domain KSS82_09130 PF17827 PrmC N-terminal domain KSS82_09135 PF04247 Invasion gene expression up-regulator, SirB KSS82_09140 PF13369 Transglutaminase-like superfamily KSS82_09145 PF00793 DAHP synthetase I family KSS82_09150 PF02872 5'-nucleotidase, C-terminal domain KSS82_09150 PF00149 Calcineurin-like phosphoesterase KSS82_09155 PF04073 Aminoacyl-tRNA editing domain KSS82_09160 PF00860 Permease family KSS82_09175 PF03358 NADPH-dependent FMN reductase KSS82_09180 PF03960 ArsC family KSS82_09185 PF01435 Peptidase family M48 KSS82_09185 PF13181 Tetratricopeptide repeat KSS82_09195 PF01594 AI-2E family transporter KSS82_09200 PF00672 HAMP domain KSS82_09200 PF02743 Cache domain KSS82_09200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KSS82_09205 PF00578 AhpC/TSA family KSS82_09215 PF00701 Dihydrodipicolinate synthetase family KSS82_09220 PF06804 NlpB/DapX lipoprotein KSS82_09230 PF02557 D-alanyl-D-alanine carboxypeptidase KSS82_09235 PF07687 Peptidase dimerisation domain KSS82_09235 PF01546 Peptidase family M20/M25/M40 KSS82_09240 PF03960 ArsC family KSS82_09255 PF11143 Protein of unknown function (DUF2919) KSS82_09260 PF04261 Dyp-type peroxidase family KSS82_09265 PF10282 Lactonase, 7-bladed beta-propeller KSS82_09270 PF02838 Glycosyl hydrolase family 20, domain 2 KSS82_09270 PF00728 Glycosyl hydrolase family 20, catalytic domain KSS82_09275 PF01081 KDPG and KHG aldolase KSS82_09280 PF00294 pfkB family carbohydrate kinase KSS82_09285 PF00474 Sodium:solute symporter family KSS82_09295 PF07969 Amidohydrolase family KSS82_09305 PF01380 SIS domain KSS82_09305 PF01418 Helix-turn-helix domain, rpiR family KSS82_09305 PF02685 Glucokinase KSS82_09310 PF00669 Bacterial flagellin N-terminal helical region KSS82_09310 PF07196 Flagellin hook IN motif KSS82_09310 PF00700 Bacterial flagellin C-terminal helical region KSS82_09315 PF00669 Bacterial flagellin N-terminal helical region KSS82_09315 PF00700 Bacterial flagellin C-terminal helical region KSS82_09315 PF07196 Flagellin hook IN motif KSS82_09320 PF00700 Bacterial flagellin C-terminal helical region KSS82_09320 PF07196 Flagellin hook IN motif KSS82_09320 PF00669 Bacterial flagellin N-terminal helical region KSS82_09325 PF03646 FlaG protein KSS82_09330 PF07196 Flagellin hook IN motif KSS82_09330 PF02465 Flagellar hook-associated protein 2 N-terminus KSS82_09330 PF07195 Flagellar hook-associated protein 2 C-terminus KSS82_09340 PF02561 Flagellar protein FliS KSS82_09345 PF02954 Bacterial regulatory protein, Fis family KSS82_09345 PF06490 Flagellar regulatory protein FleQ KSS82_09345 PF00158 Sigma-54 interaction domain KSS82_09350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSS82_09350 PF00512 His Kinase A (phospho-acceptor) domain KSS82_09350 PF13188 PAS domain KSS82_09355 PF02954 Bacterial regulatory protein, Fis family KSS82_09355 PF00072 Response regulator receiver domain KSS82_09355 PF00158 Sigma-54 interaction domain KSS82_09360 PF02049 Flagellar hook-basal body complex protein FliE KSS82_09365 PF01514 Secretory protein of YscJ/FliF family KSS82_09365 PF08345 Flagellar M-ring protein C-terminal KSS82_09370 PF14842 FliG N-terminal domain KSS82_09370 PF14841 FliG middle domain KSS82_09370 PF01706 FliG C-terminal domain KSS82_09375 PF02108 Flagellar assembly protein FliH KSS82_09380 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KSS82_09380 PF18269 T3SS EscN ATPase C-terminal domain KSS82_09400 PF02154 Flagellar motor switch protein FliM KSS82_09400 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KSS82_09405 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KSS82_09410 PF04347 Flagellar biosynthesis protein, FliO KSS82_09415 PF00813 FliP family KSS82_09420 PF01313 Bacterial export proteins, family 3 KSS82_09425 PF01311 Bacterial export proteins, family 1 KSS82_09430 PF01312 FlhB HrpN YscU SpaS Family KSS82_09435 PF01713 Smr domain KSS82_09440 PF05175 Methyltransferase small domain KSS82_09445 PF01264 Chorismate synthase KSS82_09450 PF03458 UPF0126 domain KSS82_09455 PF04315 Elongation factor P hydroxylase KSS82_09460 PF08891 YfcL protein KSS82_09465 PF03358 NADPH-dependent FMN reductase KSS82_09470 PF01266 FAD dependent oxidoreductase KSS82_09470 PF05430 S-adenosyl-L-methionine-dependent methyltransferase KSS82_09475 PF00109 Beta-ketoacyl synthase, N-terminal domain KSS82_09475 PF02801 Beta-ketoacyl synthase, C-terminal domain KSS82_09480 PF11890 Domain of unknown function (DUF3410) KSS82_09480 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KSS82_09480 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KSS82_09485 PF01118 Semialdehyde dehydrogenase, NAD binding domain KSS82_09485 PF02774 Semialdehyde dehydrogenase, dimerisation domain KSS82_09490 PF01475 Ferric uptake regulator family KSS82_09500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSS82_09500 PF03466 LysR substrate binding domain KSS82_09505 PF03788 LrgA family KSS82_09510 PF04172 LrgB-like family KSS82_09515 PF00258 Flavodoxin KSS82_09525 PF12697 Alpha/beta hydrolase family KSS82_09530 PF03925 SeqA protein C-terminal domain KSS82_09530 PF17206 SeqA protein N-terminal domain KSS82_09535 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KSS82_09535 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KSS82_09535 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KSS82_09535 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KSS82_09545 PF01784 NIF3 (NGG1p interacting factor 3) KSS82_09550 PF00285 Citrate synthase, C-terminal domain KSS82_09555 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KSS82_09560 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KSS82_09565 PF00890 FAD binding domain KSS82_09565 PF02910 Fumarate reductase flavoprotein C-term KSS82_09570 PF13085 2Fe-2S iron-sulfur cluster binding domain KSS82_09575 PF02779 Transketolase, pyrimidine binding domain KSS82_09575 PF16870 2-oxoglutarate dehydrogenase C-terminal KSS82_09575 PF16078 2-oxoglutarate dehydrogenase N-terminus KSS82_09575 PF00676 Dehydrogenase E1 component KSS82_09580 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KSS82_09580 PF00364 Biotin-requiring enzyme KSS82_09580 PF02817 e3 binding domain KSS82_09585 PF08442 ATP-grasp domain KSS82_09585 PF00549 CoA-ligase KSS82_09590 PF02629 CoA binding domain KSS82_09590 PF00549 CoA-ligase KSS82_09595 PF00950 ABC 3 transport family KSS82_09600 PF00005 ABC transporter KSS82_09605 PF01297 Zinc-uptake complex component A periplasmic KSS82_09615 PF04023 FeoA domain KSS82_09620 PF07664 Ferrous iron transport protein B C terminus KSS82_09620 PF02421 Ferrous iron transport protein B KSS82_09620 PF07670 Nucleoside recognition KSS82_09635 PF00750 tRNA synthetases class I (R) KSS82_09635 PF05746 DALR anticodon binding domain KSS82_09635 PF03485 Arginyl tRNA synthetase N terminal domain KSS82_09645 PF00675 Insulinase (Peptidase family M16) KSS82_09645 PF05193 Peptidase M16 inactive domain KSS82_09645 PF16187 Middle or third domain of peptidase_M16 KSS82_09650 PF00300 Histidine phosphatase superfamily (branch 1) KSS82_09655 PF00771 FHIPEP family KSS82_09660 PF00448 SRP54-type protein, GTPase domain KSS82_09665 PF10609 NUBPL iron-transfer P-loop NTPase KSS82_09670 PF04542 Sigma-70 region 2 KSS82_09670 PF04539 Sigma-70 region 3 KSS82_09670 PF04545 Sigma-70, region 4 KSS82_09675 PF00072 Response regulator receiver domain KSS82_09680 PF04344 Chemotaxis phosphatase, CheZ KSS82_09685 PF00072 Response regulator receiver domain KSS82_09685 PF01627 Hpt domain KSS82_09685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSS82_09685 PF01584 CheW-like domain KSS82_09685 PF02895 Signal transducing histidine kinase, homodimeric domain KSS82_09690 PF01339 CheB methylesterase KSS82_09690 PF00072 Response regulator receiver domain KSS82_09695 PF13614 AAA domain KSS82_09705 PF01584 CheW-like domain KSS82_09715 PF00005 ABC transporter KSS82_09720 PF03379 CcmB protein KSS82_09725 PF01578 Cytochrome C assembly protein KSS82_09735 PF03100 CcmE KSS82_09740 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal KSS82_09740 PF01578 Cytochrome C assembly protein KSS82_09745 PF08534 Redoxin KSS82_09750 PF03918 Cytochrome C biogenesis protein KSS82_09760 PF04333 MlaA lipoprotein KSS82_09775 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KSS82_09775 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KSS82_09780 PF00462 Glutaredoxin KSS82_09785 PF01751 Toprim domain KSS82_09785 PF01131 DNA topoisomerase KSS82_09790 PF00850 Histone deacetylase domain KSS82_09830 PF02899 Phage integrase, N-terminal SAM-like domain KSS82_09830 PF00589 Phage integrase family KSS82_09835 PF00166 Chaperonin 10 Kd subunit KSS82_09840 PF03869 Arc-like DNA binding domain KSS82_10050 PF02899 Phage integrase, N-terminal SAM-like domain KSS82_10050 PF00589 Phage integrase family KSS82_10110 PF11893 Domain of unknown function (DUF3413) KSS82_10110 PF00884 Sulfatase KSS82_10115 PF07208 Protein of unknown function (DUF1414) KSS82_10120 PF04245 37-kD nucleoid-associated bacterial protein KSS82_10130 PF03553 Na+/H+ antiporter family KSS82_10135 PF01118 Semialdehyde dehydrogenase, NAD binding domain KSS82_10135 PF02774 Semialdehyde dehydrogenase, dimerisation domain KSS82_10140 PF00520 Ion transport protein KSS82_10140 PF00027 Cyclic nucleotide-binding domain KSS82_10145 PF01914 MarC family integral membrane protein KSS82_10150 PF00171 Aldehyde dehydrogenase family KSS82_10150 PF00465 Iron-containing alcohol dehydrogenase KSS82_10160 PF12111 Polyribonucleotide phosphorylase C terminal KSS82_10160 PF10150 Ribonuclease E/G family KSS82_10160 PF00575 S1 RNA binding domain KSS82_10165 PF00849 RNA pseudouridylate synthase KSS82_10165 PF01479 S4 domain KSS82_10170 PF02545 Maf-like protein KSS82_10175 PF02620 Large ribosomal RNA subunit accumulation protein YceD KSS82_10180 PF01783 Ribosomal L32p protein family KSS82_10185 PF02504 Fatty acid synthesis protein KSS82_10190 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KSS82_10190 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KSS82_10195 PF00698 Acyl transferase domain KSS82_10205 PF00550 Phosphopantetheine attachment site KSS82_10210 PF00109 Beta-ketoacyl synthase, N-terminal domain KSS82_10210 PF02801 Beta-ketoacyl synthase, C-terminal domain KSS82_10215 PF01063 Amino-transferase class IV KSS82_10220 PF02618 YceG-like family KSS82_10225 PF02223 Thymidylate kinase KSS82_10230 PF09115 DNA polymerase III, delta subunit, C terminal KSS82_10235 PF01026 TatD related DNase KSS82_10240 PF00367 phosphotransferase system, EIIB KSS82_10240 PF02378 Phosphotransferase system, EIIC KSS82_10255 PF00209 Sodium:neurotransmitter symporter family KSS82_10270 PF01734 Patatin-like phospholipase KSS82_10275 PF00224 Pyruvate kinase, barrel domain KSS82_10275 PF02887 Pyruvate kinase, alpha/beta domain KSS82_10280 PF00480 ROK family KSS82_10285 PF00072 Response regulator receiver domain KSS82_10285 PF01584 CheW-like domain KSS82_10295 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KSS82_10310 PF13847 Methyltransferase domain KSS82_10320 PF01263 Aldose 1-epimerase KSS82_10325 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KSS82_10325 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KSS82_10330 PF01641 SelR domain KSS82_10340 PF07023 Protein of unknown function (DUF1315) KSS82_10345 PF17763 Glutaminase/Asparaginase C-terminal domain KSS82_10345 PF00710 Asparaginase, N-terminal KSS82_10350 PF01343 Peptidase family S49 KSS82_10355 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KSS82_10355 PF07992 Pyridine nucleotide-disulphide oxidoreductase KSS82_10360 PF01842 ACT domain KSS82_10360 PF00551 Formyl transferase KSS82_10370 PF13307 Helicase C-terminal domain KSS82_10370 PF04851 Type III restriction enzyme, res subunit KSS82_10375 PF00814 Glycoprotease family KSS82_10390 PF00561 alpha/beta hydrolase fold KSS82_10395 PF00501 AMP-binding enzyme KSS82_10395 PF13193 AMP-binding enzyme C-terminal domain KSS82_10400 PF01612 3'-5' exonuclease KSS82_10400 PF00570 HRDC domain KSS82_10420 PF01966 HD domain KSS82_10420 PF13286 Phosphohydrolase-associated domain KSS82_10430 PF00155 Aminotransferase class I and II KSS82_10435 PF00425 chorismate binding enzyme KSS82_10440 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KSS82_10440 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KSS82_10440 PF16582 Middle domain of thiamine pyrophosphate KSS82_10445 PF12697 Alpha/beta hydrolase family KSS82_10450 PF00378 Enoyl-CoA hydratase/isomerase KSS82_10455 PF13378 Enolase C-terminal domain-like KSS82_10460 PF00501 AMP-binding enzyme KSS82_10460 PF13193 AMP-binding enzyme C-terminal domain KSS82_10465 PF03594 Benzoate membrane transport protein KSS82_10470 PF07883 Cupin domain KSS82_10470 PF01381 Helix-turn-helix KSS82_10475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KSS82_10475 PF00672 HAMP domain KSS82_10480 PF07690 Major Facilitator Superfamily KSS82_10500 PF04170 NlpE N-terminal domain KSS82_10505 PF03776 Septum formation topological specificity factor MinE KSS82_10510 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KSS82_10515 PF03775 Septum formation inhibitor MinC, C-terminal domain KSS82_10515 PF05209 Septum formation inhibitor MinC, N-terminal domain KSS82_10520 PF05166 YcgL domain KSS82_10525 PF13406 Transglycosylase SLT domain KSS82_10530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSS82_10530 PF03466 LysR substrate binding domain KSS82_10535 PF07662 Na+ dependent nucleoside transporter C-terminus KSS82_10535 PF07670 Nucleoside recognition KSS82_10535 PF01773 Na+ dependent nucleoside transporter N-terminus KSS82_10540 PF00704 Glycosyl hydrolases family 18 KSS82_10540 PF06483 Chitinase C KSS82_10550 PF03466 LysR substrate binding domain KSS82_10550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSS82_10555 PF01494 FAD binding domain KSS82_10560 PF02668 Taurine catabolism dioxygenase TauD, TfdA family KSS82_10570 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KSS82_10570 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KSS82_10580 PF07715 TonB-dependent Receptor Plug Domain KSS82_10580 PF00593 TonB dependent receptor KSS82_10585 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) KSS82_10590 PF04183 IucA / IucC family KSS82_10590 PF06276 Ferric iron reductase FhuF-like transporter KSS82_10600 PF06276 Ferric iron reductase FhuF-like transporter KSS82_10600 PF04183 IucA / IucC family KSS82_10605 PF01032 FecCD transport family KSS82_10610 PF01497 Periplasmic binding protein KSS82_10615 PF00005 ABC transporter KSS82_10640 PF01569 PAP2 superfamily KSS82_10660 PF00563 EAL domain KSS82_10660 PF00990 Diguanylate cyclase, GGDEF domain KSS82_10660 PF03707 Bacterial signalling protein N terminal repeat KSS82_10670 PF02696 Uncharacterized ACR, YdiU/UPF0061 family KSS82_10675 PF03480 Bacterial extracellular solute-binding protein, family 7 KSS82_10680 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component KSS82_10685 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KSS82_10690 PF00158 Sigma-54 interaction domain KSS82_10690 PF02954 Bacterial regulatory protein, Fis family KSS82_10690 PF00072 Response regulator receiver domain KSS82_10695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSS82_10695 PF00512 His Kinase A (phospho-acceptor) domain KSS82_10700 PF05697 Bacterial trigger factor protein (TF) KSS82_10700 PF05698 Bacterial trigger factor protein (TF) C-terminus KSS82_10700 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KSS82_10705 PF00574 Clp protease KSS82_10710 PF07724 AAA domain (Cdc48 subfamily) KSS82_10710 PF10431 C-terminal, D2-small domain, of ClpB protein KSS82_10710 PF06689 ClpX C4-type zinc finger KSS82_10715 PF00004 ATPase family associated with various cellular activities (AAA) KSS82_10715 PF05362 Lon protease (S16) C-terminal proteolytic domain KSS82_10715 PF02190 ATP-dependent protease La (LON) substrate-binding domain KSS82_10720 PF00216 Bacterial DNA-binding protein KSS82_10725 PF13145 PPIC-type PPIASE domain KSS82_10735 PF02224 Cytidylate kinase KSS82_10740 PF00575 S1 RNA binding domain KSS82_10745 PF00216 Bacterial DNA-binding protein KSS82_10750 PF06305 Lipopolysaccharide assembly protein A domain KSS82_10755 PF18073 Rubredoxin metal binding domain KSS82_10760 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KSS82_10765 PF00528 Binding-protein-dependent transport system inner membrane component KSS82_10770 PF12911 N-terminal TM domain of oligopeptide transport permease C KSS82_10770 PF00528 Binding-protein-dependent transport system inner membrane component KSS82_10775 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KSS82_10780 PF00005 ABC transporter KSS82_10780 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KSS82_10785 PF00005 ABC transporter KSS82_10785 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KSS82_10800 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) KSS82_10810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSS82_10810 PF03466 LysR substrate binding domain KSS82_10820 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KSS82_10820 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KSS82_10825 PF01037 Lrp/AsnC ligand binding domain KSS82_10830 PF13491 4TM region of DNA translocase FtsK/SpoIIIE KSS82_10830 PF17854 FtsK alpha domain KSS82_10830 PF09397 Ftsk gamma domain KSS82_10830 PF01580 FtsK/SpoIIIE family KSS82_10835 PF02600 Disulfide bond formation protein DsbB KSS82_10840 PF06450 Bacterial Na+/H+ antiporter B (NhaB) KSS82_10845 PF00392 Bacterial regulatory proteins, gntR family KSS82_10845 PF07840 FadR C-terminal domain KSS82_10855 PF00672 HAMP domain KSS82_10855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KSS82_10860 PF01230 HIT domain KSS82_10875 PF13036 Peptidoglycan-synthase activator LpoB KSS82_10875 PF08139 Prokaryotic membrane lipoprotein lipid attachment site KSS82_10880 PF01636 Phosphotransferase enzyme family KSS82_10885 PF05728 Uncharacterised protein family (UPF0227) KSS82_10890 PF07992 Pyridine nucleotide-disulphide oxidoreductase KSS82_10900 PF07968 Leukocidin/Hemolysin toxin family KSS82_10900 PF12563 Hemolytic toxin N terminal KSS82_10900 PF16458 Beta-prism lectin KSS82_10910 PF02559 CarD-like/TRCF domain KSS82_10910 PF00270 DEAD/DEAH box helicase KSS82_10910 PF00271 Helicase conserved C-terminal domain KSS82_10910 PF03461 TRCF domain KSS82_10910 PF17757 UvrB interaction domain KSS82_10920 PF02687 FtsX-like permease family KSS82_10920 PF12704 MacB-like periplasmic core domain KSS82_10925 PF00005 ABC transporter KSS82_10930 PF02687 FtsX-like permease family KSS82_10930 PF12704 MacB-like periplasmic core domain KSS82_10940 PF03772 Competence protein KSS82_10940 PF13567 Domain of unknown function (DUF4131) KSS82_10940 PF00753 Metallo-beta-lactamase superfamily KSS82_10945 PF00664 ABC transporter transmembrane region KSS82_10945 PF00005 ABC transporter KSS82_10950 PF02606 Tetraacyldisaccharide-1-P 4'-kinase KSS82_10955 PF03966 Trm112p-like protein KSS82_10960 PF02348 Cytidylyltransferase KSS82_10975 PF08521 Two-component sensor kinase N-terminal KSS82_10975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSS82_10975 PF00512 His Kinase A (phospho-acceptor) domain KSS82_10980 PF00486 Transcriptional regulatory protein, C terminal KSS82_10980 PF00072 Response regulator receiver domain KSS82_10985 PF00367 phosphotransferase system, EIIB KSS82_10985 PF02378 Phosphotransferase system, EIIC KSS82_10990 PF04293 SpoVR like protein KSS82_10995 PF04285 Protein of unknown function (DUF444) KSS82_11000 PF06798 PrkA serine protein kinase C-terminal domain KSS82_11000 PF08298 PrkA AAA domain KSS82_11005 PF03887 YfbU domain KSS82_11015 PF04055 Radical SAM superfamily KSS82_11020 PF00672 HAMP domain KSS82_11020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KSS82_11030 PF01228 Glycine radical KSS82_11030 PF02901 Pyruvate formate lyase-like KSS82_11040 PF00005 ABC transporter KSS82_11045 PF00497 Bacterial extracellular solute-binding proteins, family 3 KSS82_11050 PF00528 Binding-protein-dependent transport system inner membrane component KSS82_11055 PF00528 Binding-protein-dependent transport system inner membrane component KSS82_11060 PF03372 Endonuclease/Exonuclease/phosphatase family KSS82_11065 PF10689 Protein of unknown function (DUF2496) KSS82_11070 PF07445 Primosomal replication protein priC KSS82_11075 PF01925 Sulfite exporter TauE/SafE KSS82_11080 PF06733 DEAD_2 KSS82_11080 PF13307 Helicase C-terminal domain KSS82_11085 PF13609 Gram-negative porin KSS82_11090 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) KSS82_11095 PF02810 SEC-C motif KSS82_11100 PF00563 EAL domain KSS82_11100 PF08668 HDOD domain KSS82_11105 PF00149 Calcineurin-like phosphoesterase KSS82_11110 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KSS82_11115 PF09190 DALR domain KSS82_11115 PF01406 tRNA synthetases class I (C) catalytic domain KSS82_11120 PF02075 Crossover junction endodeoxyribonuclease RuvC KSS82_11125 PF07499 RuvA, C-terminal domain KSS82_11125 PF01330 RuvA N terminal domain KSS82_11130 PF17864 RuvB AAA lid domain KSS82_11130 PF05491 RuvB C-terminal winged helix domain KSS82_11130 PF05496 Holliday junction DNA helicase RuvB P-loop domain KSS82_11135 PF01654 Cytochrome bd terminal oxidase subunit I KSS82_11140 PF02322 Cytochrome bd terminal oxidase subunit II KSS82_11145 PF08173 Membrane bound YbgT-like protein KSS82_11155 PF03061 Thioesterase superfamily KSS82_11160 PF01618 MotA/TolQ/ExbB proton channel family KSS82_11165 PF02472 Biopolymer transport protein ExbD/TolR KSS82_11175 PF07676 WD40-like Beta Propeller Repeat KSS82_11175 PF04052 TolB amino-terminal domain KSS82_11180 PF00691 OmpA family KSS82_11190 PF02445 Quinolinate synthetase A protein KSS82_11200 PF00512 His Kinase A (phospho-acceptor) domain KSS82_11200 PF09308 LuxQ, periplasmic KSS82_11200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSS82_11200 PF00072 Response regulator receiver domain KSS82_11205 PF06610 L-alanine exporter KSS82_11210 PF01238 Phosphomannose isomerase type I KSS82_11215 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KSS82_11215 PF02378 Phosphotransferase system, EIIC KSS82_11215 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KSS82_11220 PF12833 Helix-turn-helix domain KSS82_11230 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KSS82_11250 PF09905 DNA-binding protein VF530 KSS82_11295 PF04002 RadC-like JAB domain KSS82_11350 PF04717 Type VI secretion system, phage-baseplate injector KSS82_11355 PF05638 Type VI secretion system effector, Hcp KSS82_11370 PF14338 Mrr N-terminal domain KSS82_11370 PF04471 Restriction endonuclease KSS82_11375 PF00271 Helicase conserved C-terminal domain KSS82_11375 PF04851 Type III restriction enzyme, res subunit KSS82_11375 PF08463 EcoEI R protein C-terminal KSS82_11375 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) KSS82_11395 PF13356 Arm DNA-binding domain KSS82_11395 PF00589 Phage integrase family KSS82_11400 PF00589 Phage integrase family KSS82_11400 PF13356 Arm DNA-binding domain KSS82_11495 PF00574 Clp protease KSS82_11510 PF03354 Phage Terminase KSS82_11545 PF00959 Phage lysozyme KSS82_11560 PF06147 Protein of unknown function (DUF968) KSS82_11630 PF01381 Helix-turn-helix KSS82_11630 PF00717 Peptidase S24-like KSS82_11635 PF00533 BRCA1 C Terminus (BRCT) domain KSS82_11635 PF01653 NAD-dependent DNA ligase adenylation domain KSS82_11635 PF03120 NAD-dependent DNA ligase OB-fold domain KSS82_11635 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KSS82_11635 PF12826 Helix-hairpin-helix motif KSS82_11660 PF04381 Putative exonuclease, RdgC KSS82_11780 PF00589 Phage integrase family KSS82_11780 PF13356 Arm DNA-binding domain KSS82_11790 PF01418 Helix-turn-helix domain, rpiR family KSS82_11790 PF01380 SIS domain KSS82_11795 PF03606 C4-dicarboxylate anaerobic carrier KSS82_11800 PF01546 Peptidase family M20/M25/M40 KSS82_11800 PF07687 Peptidase dimerisation domain KSS82_11805 PF03575 Peptidase family S51 KSS82_11810 PF00563 EAL domain KSS82_11810 PF00990 Diguanylate cyclase, GGDEF domain KSS82_11810 PF13426 PAS domain KSS82_11815 PF00873 AcrB/AcrD/AcrF family KSS82_11820 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KSS82_11830 PF08362 YcdC-like protein, C-terminal region KSS82_11830 PF00440 Bacterial regulatory proteins, tetR family KSS82_11835 PF00171 Aldehyde dehydrogenase family KSS82_11840 PF07383 Protein of unknown function (DUF1496) KSS82_11850 PF16295 Tetracyclin repressor-like, C-terminal domain KSS82_11850 PF00440 Bacterial regulatory proteins, tetR family KSS82_11855 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KSS82_11855 PF02770 Acyl-CoA dehydrogenase, middle domain KSS82_11855 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KSS82_11855 PF09317 Domain of unknown function (DUF1974) KSS82_11860 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase KSS82_11860 PF12241 Trans-2-enoyl-CoA reductase catalytic region KSS82_11860 PF07055 Enoyl reductase FAD binding domain KSS82_11865 PF01176 Translation initiation factor 1A / IF-1 KSS82_11870 PF04377 Arginine-tRNA-protein transferase, C terminus KSS82_11870 PF04376 Arginine-tRNA-protein transferase, N terminus KSS82_11875 PF03588 Leucyl/phenylalanyl-tRNA protein transferase KSS82_11880 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KSS82_11885 PF10692 Protein of unknown function (DUF2498) KSS82_11890 PF08272 Topoisomerase I zinc-ribbon-like KSS82_11890 PF01751 Toprim domain KSS82_11890 PF01396 Topoisomerase DNA binding C4 zinc finger KSS82_11890 PF01131 DNA topoisomerase KSS82_11895 PF00483 Nucleotidyl transferase KSS82_11900 PF08323 Starch synthase catalytic domain KSS82_11900 PF00534 Glycosyl transferases group 1 KSS82_11920 PF04994 TfoX C-terminal domain KSS82_11920 PF04993 TfoX N-terminal domain KSS82_11925 PF00356 Bacterial regulatory proteins, lacI family KSS82_11930 PF02613 Nitrate reductase delta subunit KSS82_11935 PF00486 Transcriptional regulatory protein, C terminal KSS82_11935 PF00072 Response regulator receiver domain KSS82_11940 PF02698 DUF218 domain KSS82_11945 PF13847 Methyltransferase domain KSS82_11950 PF17192 MukF middle domain KSS82_11950 PF17193 MukF C-terminal domain KSS82_11950 PF03882 MukF winged-helix domain KSS82_11955 PF04288 MukE-like family KSS82_11960 PF16330 MukB hinge domain KSS82_11960 PF04310 MukB N-terminal KSS82_11965 PF01037 Lrp/AsnC ligand binding domain KSS82_11970 PF01810 LysE type translocator KSS82_11975 PF11842 Domain of unknown function (DUF3362) KSS82_11975 PF04055 Radical SAM superfamily KSS82_11975 PF08497 Radical SAM N-terminal KSS82_11980 PF00563 EAL domain KSS82_11980 PF00990 Diguanylate cyclase, GGDEF domain KSS82_11980 PF08447 PAS fold KSS82_11980 PF08448 PAS fold KSS82_12000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSS82_12000 PF03466 LysR substrate binding domain KSS82_12005 PF08267 Cobalamin-independent synthase, N-terminal domain KSS82_12005 PF01717 Cobalamin-independent synthase, Catalytic domain KSS82_12015 PF03795 YCII-related domain KSS82_12020 PF03061 Thioesterase superfamily KSS82_12025 PF04279 Intracellular septation protein A KSS82_12030 PF03707 Bacterial signalling protein N terminal repeat KSS82_12030 PF00563 EAL domain KSS82_12030 PF00990 Diguanylate cyclase, GGDEF domain KSS82_12040 PF02698 DUF218 domain KSS82_12045 PF01370 NAD dependent epimerase/dehydratase family KSS82_12055 PF01226 Formate/nitrite transporter KSS82_12060 PF06796 Periplasmic nitrate reductase protein NapE KSS82_12065 PF03264 NapC/NirT cytochrome c family, N-terminal region KSS82_12070 PF18364 Molybdopterin oxidoreductase N-terminal domain KSS82_12070 PF01568 Molydopterin dinucleotide binding domain KSS82_12070 PF00384 Molybdopterin oxidoreductase KSS82_12080 PF03193 RsgA GTPase KSS82_12085 PF01368 DHH family KSS82_12085 PF02833 DHHA2 domain KSS82_12120 PF00005 ABC transporter KSS82_12125 PF00005 ABC transporter KSS82_12125 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KSS82_12130 PF00528 Binding-protein-dependent transport system inner membrane component KSS82_12130 PF12911 N-terminal TM domain of oligopeptide transport permease C KSS82_12135 PF00528 Binding-protein-dependent transport system inner membrane component KSS82_12140 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KSS82_12145 PF02954 Bacterial regulatory protein, Fis family KSS82_12145 PF00158 Sigma-54 interaction domain KSS82_12150 PF04012 PspA/IM30 family KSS82_12165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KSS82_12170 PF00529 HlyD membrane-fusion protein of T1SS KSS82_12170 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KSS82_12175 PF00873 AcrB/AcrD/AcrF family KSS82_12180 PF03352 Methyladenine glycosylase KSS82_12185 PF01053 Cys/Met metabolism PLP-dependent enzyme KSS82_12190 PF13396 Phospholipase_D-nuclease N-terminal KSS82_12190 PF13091 PLD-like domain KSS82_12195 PF00209 Sodium:neurotransmitter symporter family KSS82_12200 PF00195 Chalcone and stilbene synthases, N-terminal domain KSS82_12200 PF02797 Chalcone and stilbene synthases, C-terminal domain KSS82_12205 PF11647 Membrane Localization Domain KSS82_12220 PF00849 RNA pseudouridylate synthase KSS82_12225 PF01066 CDP-alcohol phosphatidyltransferase KSS82_12230 PF00005 ABC transporter KSS82_12235 PF00528 Binding-protein-dependent transport system inner membrane component KSS82_12240 PF13416 Bacterial extracellular solute-binding protein KSS82_12250 PF06945 Protein of unknown function (DUF1289) KSS82_12265 PF00005 ABC transporter KSS82_12275 PF03222 Tryptophan/tyrosine permease family KSS82_12285 PF01769 Divalent cation transporter KSS82_12285 PF00571 CBS domain KSS82_12285 PF03448 MgtE intracellular N domain KSS82_12290 PF09456 RcsC Alpha-Beta-Loop (ABL) KSS82_12290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSS82_12290 PF00512 His Kinase A (phospho-acceptor) domain KSS82_12290 PF00072 Response regulator receiver domain KSS82_12295 PF00990 Diguanylate cyclase, GGDEF domain KSS82_12295 PF00563 EAL domain KSS82_12295 PF03707 Bacterial signalling protein N terminal repeat KSS82_12305 PF08453 Peptidase family M9 N-terminal KSS82_12305 PF04151 Bacterial pre-peptidase C-terminal domain KSS82_12305 PF01752 Collagenase KSS82_12315 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KSS82_12315 PF12793 Sugar transport-related sRNA regulator N-term KSS82_12335 PF12729 Four helix bundle sensory module for signal transduction KSS82_12335 PF00672 HAMP domain KSS82_12335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KSS82_12340 PF13302 Acetyltransferase (GNAT) domain KSS82_12350 PF00132 Bacterial transferase hexapeptide (six repeats) KSS82_12395 PF13737 Transposase DDE domain KSS82_12405 PF01386 Ribosomal L25p family KSS82_12415 PF00486 Transcriptional regulatory protein, C terminal KSS82_12415 PF00072 Response regulator receiver domain KSS82_12425 PF00271 Helicase conserved C-terminal domain KSS82_12425 PF04851 Type III restriction enzyme, res subunit KSS82_12430 PF00849 RNA pseudouridylate synthase KSS82_12430 PF01479 S4 domain KSS82_12435 PF07690 Major Facilitator Superfamily KSS82_12450 PF00902 Sec-independent protein translocase protein (TatC) KSS82_12455 PF02416 mttA/Hcf106 family KSS82_12460 PF02416 mttA/Hcf106 family KSS82_12470 PF01970 Tripartite tricarboxylate transporter TctA family KSS82_12485 PF07729 FCD domain KSS82_12485 PF00392 Bacterial regulatory proteins, gntR family KSS82_12495 PF00285 Citrate synthase, C-terminal domain KSS82_12500 PF00330 Aconitase family (aconitate hydratase) KSS82_12500 PF00694 Aconitase C-terminal domain KSS82_12505 PF04303 PrpF protein KSS82_12510 PF16177 Acetyl-coenzyme A synthetase N-terminus KSS82_12510 PF00501 AMP-binding enzyme KSS82_12510 PF13193 AMP-binding enzyme C-terminal domain KSS82_12525 PF01546 Peptidase family M20/M25/M40 KSS82_12525 PF07687 Peptidase dimerisation domain KSS82_12530 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KSS82_12535 PF04209 homogentisate 1,2-dioxygenase KSS82_12545 PF14497 Glutathione S-transferase, C-terminal domain KSS82_12545 PF02798 Glutathione S-transferase, N-terminal domain KSS82_12550 PF00072 Response regulator receiver domain KSS82_12555 PF00672 HAMP domain KSS82_12555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSS82_12555 PF00512 His Kinase A (phospho-acceptor) domain KSS82_12555 PF01627 Hpt domain KSS82_12555 PF00072 Response regulator receiver domain KSS82_12555 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KSS82_12560 PF08534 Redoxin KSS82_12560 PF00462 Glutaredoxin KSS82_12565 PF00990 Diguanylate cyclase, GGDEF domain KSS82_12570 PF17785 PUA-like domain KSS82_12570 PF10672 S-adenosylmethionine-dependent methyltransferase KSS82_12575 PF02743 Cache domain KSS82_12575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KSS82_12575 PF00672 HAMP domain KSS82_12580 PF00708 Acylphosphatase KSS82_12585 PF04358 DsrC like protein KSS82_12590 PF01027 Inhibitor of apoptosis-promoting Bax1 KSS82_12595 PF00005 ABC transporter KSS82_12600 PF00528 Binding-protein-dependent transport system inner membrane component KSS82_12605 PF00528 Binding-protein-dependent transport system inner membrane component KSS82_12610 PF00497 Bacterial extracellular solute-binding proteins, family 3 KSS82_12615 PF10414 Sirohaem synthase dimerisation region KSS82_12615 PF14824 Sirohaem biosynthesis protein central KSS82_12615 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KSS82_12625 PF04055 Radical SAM superfamily KSS82_12630 PF06508 Queuosine biosynthesis protein QueC KSS82_12650 PF00990 Diguanylate cyclase, GGDEF domain KSS82_12650 PF03707 Bacterial signalling protein N terminal repeat KSS82_12650 PF00563 EAL domain KSS82_12660 PF00990 Diguanylate cyclase, GGDEF domain KSS82_12660 PF17158 Membrane-associated sensor, integral membrane domain KSS82_12665 PF00012 Hsp70 protein KSS82_12670 PF00012 Hsp70 protein KSS82_12680 PF17158 Membrane-associated sensor, integral membrane domain KSS82_12680 PF00990 Diguanylate cyclase, GGDEF domain KSS82_12700 PF11898 Domain of unknown function (DUF3418) KSS82_12700 PF04408 Helicase associated domain (HA2) KSS82_12700 PF00271 Helicase conserved C-terminal domain KSS82_12700 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold KSS82_12700 PF00270 DEAD/DEAH box helicase KSS82_12710 PF02836 Glycosyl hydrolases family 2, TIM barrel domain KSS82_12710 PF00703 Glycosyl hydrolases family 2 KSS82_12710 PF02837 Glycosyl hydrolases family 2, sugar binding domain KSS82_12710 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 KSS82_12715 PF01979 Amidohydrolase family KSS82_12720 PF00012 Hsp70 protein KSS82_12725 PF03466 LysR substrate binding domain KSS82_12725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSS82_12730 PF07690 Major Facilitator Superfamily KSS82_12735 PF00893 Small Multidrug Resistance protein KSS82_12740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KSS82_12740 PF13426 PAS domain KSS82_12740 PF08447 PAS fold KSS82_12745 PF00270 DEAD/DEAH box helicase KSS82_12745 PF00271 Helicase conserved C-terminal domain KSS82_12760 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KSS82_12760 PF12833 Helix-turn-helix domain KSS82_12765 PF00171 Aldehyde dehydrogenase family KSS82_12770 PF13193 AMP-binding enzyme C-terminal domain KSS82_12770 PF00501 AMP-binding enzyme KSS82_12775 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) KSS82_12785 PF12161 HsdM N-terminal domain KSS82_12785 PF02384 N-6 DNA Methylase KSS82_12795 PF02074 Carboxypeptidase Taq (M32) metallopeptidase KSS82_12800 PF05638 Type VI secretion system effector, Hcp KSS82_12805 PF04717 Type VI secretion system, phage-baseplate injector KSS82_12805 PF16671 Actin cross-linking domain KSS82_12830 PF01810 LysE type translocator KSS82_12835 PF01235 Sodium:alanine symporter family KSS82_12845 PF00990 Diguanylate cyclase, GGDEF domain KSS82_12850 PF00989 PAS fold KSS82_12850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSS82_12850 PF00512 His Kinase A (phospho-acceptor) domain KSS82_12860 PF00196 Bacterial regulatory proteins, luxR family KSS82_12860 PF00072 Response regulator receiver domain KSS82_12870 PF04055 Radical SAM superfamily KSS82_12870 PF13186 Iron-sulfur cluster-binding domain KSS82_12875 PF05402 Coenzyme PQQ synthesis protein D (PqqD) KSS82_12880 PF03070 TENA/THI-4/PQQC family KSS82_12885 PF12706 Beta-lactamase superfamily domain KSS82_12890 PF08042 PqqA family KSS82_12895 PF12801 4Fe-4S binding domain KSS82_12895 PF04205 FMN-binding domain KSS82_12900 PF12801 4Fe-4S binding domain KSS82_12900 PF04205 FMN-binding domain KSS82_12905 PF00171 Aldehyde dehydrogenase family KSS82_12910 PF13360 PQQ-like domain KSS82_12910 PF01011 PQQ enzyme repeat KSS82_12920 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KSS82_12935 PF00005 ABC transporter KSS82_12945 PF13416 Bacterial extracellular solute-binding protein KSS82_12950 PF13416 Bacterial extracellular solute-binding protein KSS82_12955 PF00528 Binding-protein-dependent transport system inner membrane component KSS82_12960 PF00528 Binding-protein-dependent transport system inner membrane component KSS82_12965 PF08402 TOBE domain KSS82_12965 PF00005 ABC transporter KSS82_12985 PF01171 PP-loop family KSS82_12990 PF00582 Universal stress protein family KSS82_12995 PF00027 Cyclic nucleotide-binding domain KSS82_12995 PF13545 Crp-like helix-turn-helix domain KSS82_13010 PF00403 Heavy-metal-associated domain KSS82_13020 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KSS82_13020 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP KSS82_13035 PF00115 Cytochrome C and Quinol oxidase polypeptide I KSS82_13050 PF00672 HAMP domain KSS82_13050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSS82_13050 PF00512 His Kinase A (phospho-acceptor) domain KSS82_13050 PF01627 Hpt domain KSS82_13050 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KSS82_13050 PF00072 Response regulator receiver domain KSS82_13055 PF00664 ABC transporter transmembrane region KSS82_13055 PF00005 ABC transporter KSS82_13055 PF03412 Peptidase C39 family KSS82_13065 PF00005 ABC transporter KSS82_13065 PF03412 Peptidase C39 family KSS82_13065 PF00664 ABC transporter transmembrane region KSS82_13075 PF02794 RTX toxin acyltransferase family KSS82_13080 PF07634 RtxA repeat KSS82_13080 PF11713 Peptidase C80 family KSS82_13080 PF11647 Membrane Localization Domain KSS82_13080 PF12146 Serine aminopeptidase, S33 KSS82_13080 PF16671 Actin cross-linking domain KSS82_13100 PF05638 Type VI secretion system effector, Hcp KSS82_13105 PF04717 Type VI secretion system, phage-baseplate injector KSS82_13130 PF00579 tRNA synthetases class I (W and Y) KSS82_13140 PF00717 Peptidase S24-like KSS82_13175 PF08242 Methyltransferase domain KSS82_13215 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KSS82_13230 PF00817 impB/mucB/samB family KSS82_13230 PF13438 Domain of unknown function (DUF4113) KSS82_13230 PF11799 impB/mucB/samB family C-terminal domain KSS82_13230 PF11798 IMS family HHH motif KSS82_13255 PF07669 Eco57I restriction-modification methylase KSS82_13255 PF12950 TaqI-like C-terminal specificity domain KSS82_13260 PF04555 Restriction endonuclease XhoI KSS82_13265 PF13087 AAA domain KSS82_13265 PF13091 PLD-like domain KSS82_13280 PF04851 Type III restriction enzyme, res subunit KSS82_13320 PF00239 Resolvase, N terminal domain KSS82_13320 PF18010 Cry35Ab1 HTH C-terminal domain KSS82_13340 PF06303 MatP N-terminal domain KSS82_13340 PF17414 MatP C-terminal ribbon-helix-helix domain KSS82_13345 PF05362 Lon protease (S16) C-terminal proteolytic domain KSS82_13345 PF13654 AAA domain KSS82_13350 PF07977 FabA-like domain KSS82_13355 PF04957 Ribosome modulation factor KSS82_13365 PF12848 ABC transporter KSS82_13365 PF00005 ABC transporter KSS82_13365 PF16326 ABC transporter C-terminal domain KSS82_13375 PF10672 S-adenosylmethionine-dependent methyltransferase KSS82_13375 PF02926 THUMP domain KSS82_13375 PF01170 Putative RNA methylase family UPF0020 KSS82_13380 PF07126 Cell-division protein ZapC KSS82_13385 PF01180 Dihydroorotate dehydrogenase KSS82_13390 PF05088 Bacterial NAD-glutamate dehydrogenase KSS82_13400 PF11940 Domain of unknown function (DUF3458) Ig-like fold KSS82_13400 PF17432 Domain of unknown function (DUF3458_C) ARM repeats KSS82_13400 PF01433 Peptidase family M1 domain KSS82_13410 PF00595 PDZ domain KSS82_13410 PF11818 C-terminal domain of tail specific protease (DUF3340) KSS82_13410 PF03572 Peptidase family S41 KSS82_13410 PF17804 Tail specific protease N-terminal domain KSS82_13415 PF04352 ProQ/FINO family KSS82_13415 PF17516 ProQ C-terminal domain KSS82_13420 PF13185 GAF domain KSS82_13425 PF04403 Paraquat-inducible protein A KSS82_13430 PF02470 MlaD protein KSS82_13435 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF KSS82_13435 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF KSS82_13435 PF01189 16S rRNA methyltransferase RsmB/F KSS82_13440 PF17783 CvfB-like winged helix domain KSS82_13440 PF13509 S1 domain KSS82_13455 PF00793 DAHP synthetase I family KSS82_13460 PF04461 Protein of unknown function (DUF520) KSS82_13465 PF02146 Sir2 family KSS82_13470 PF00909 Ammonium Transporter Family KSS82_13485 PF13247 4Fe-4S dicluster domain KSS82_13490 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KSS82_13490 PF00384 Molybdopterin oxidoreductase KSS82_13490 PF01568 Molydopterin dinucleotide binding domain KSS82_13500 PF02613 Nitrate reductase delta subunit KSS82_13520 PF02634 FdhD/NarQ family KSS82_13530 PF12848 ABC transporter KSS82_13530 PF00005 ABC transporter KSS82_13535 PF00512 His Kinase A (phospho-acceptor) domain KSS82_13535 PF00989 PAS fold KSS82_13535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSS82_13540 PF02954 Bacterial regulatory protein, Fis family KSS82_13540 PF00158 Sigma-54 interaction domain KSS82_13540 PF00072 Response regulator receiver domain KSS82_13545 PF12849 PBP superfamily domain KSS82_13550 PF00528 Binding-protein-dependent transport system inner membrane component KSS82_13555 PF00005 ABC transporter KSS82_13555 PF08402 TOBE domain KSS82_13560 PF12804 MobA-like NTP transferase domain KSS82_13565 PF03454 MoeA C-terminal region (domain IV) KSS82_13565 PF03453 MoeA N-terminal region (domain I and II) KSS82_13565 PF00994 Probable molybdopterin binding domain KSS82_13575 PF00480 ROK family KSS82_13580 PF03942 DTW domain KSS82_13590 PF00877 NlpC/P60 family KSS82_13600 PF03881 Fructosamine kinase KSS82_13610 PF01554 MatE KSS82_13615 PF01068 ATP dependent DNA ligase domain KSS82_13615 PF14743 DNA ligase OB-like domain KSS82_13630 PF02472 Biopolymer transport protein ExbD/TolR KSS82_13635 PF01618 MotA/TolQ/ExbB proton channel family KSS82_13640 PF01618 MotA/TolQ/ExbB proton channel family KSS82_13650 PF13416 Bacterial extracellular solute-binding protein KSS82_13655 PF00528 Binding-protein-dependent transport system inner membrane component KSS82_13660 PF00528 Binding-protein-dependent transport system inner membrane component KSS82_13665 PF00005 ABC transporter KSS82_13665 PF17912 MalK OB fold domain KSS82_13670 PF00455 DeoR C terminal sensor domain KSS82_13670 PF08220 DeoR-like helix-turn-helix domain KSS82_13675 PF03009 Glycerophosphoryl diester phosphodiesterase family KSS82_13680 PF04074 YhcH/YjgK/YiaL KSS82_13685 PF01042 Endoribonuclease L-PSP KSS82_13690 PF00141 Peroxidase KSS82_13695 PF00977 Histidine biosynthesis protein KSS82_13710 PF00709 Adenylosuccinate synthetase KSS82_13715 PF00293 NUDIX domain KSS82_13715 PF09297 NADH pyrophosphatase zinc ribbon domain KSS82_13725 PF05893 Acyl-CoA reductase (LuxC) KSS82_13730 PF02273 Acyl transferase KSS82_13735 PF00296 Luciferase-like monooxygenase KSS82_13740 PF00296 Luciferase-like monooxygenase KSS82_13745 PF04443 Acyl-protein synthetase, LuxE KSS82_13750 PF00175 Oxidoreductase NAD-binding domain KSS82_13760 PF01593 Flavin containing amine oxidoreductase KSS82_13770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSS82_13770 PF03466 LysR substrate binding domain KSS82_13780 PF00672 HAMP domain KSS82_13780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KSS82_13780 PF02743 Cache domain KSS82_13795 PF04266 ASCH domain KSS82_13800 PF00106 short chain dehydrogenase KSS82_13805 PF00080 Copper/zinc superoxide dismutase (SODC) KSS82_13815 PF06628 Catalase-related immune-responsive KSS82_13815 PF00199 Catalase KSS82_13820 PF04224 Protein of unknown function, DUF417 KSS82_13825 PF17291 N-terminal domain of M60-like peptidases KSS82_13825 PF13322 Domain of unknown function (DUF4092) KSS82_13825 PF13402 Peptidase M60, enhancin and enhancin-like KSS82_13830 PF00072 Response regulator receiver domain KSS82_13830 PF00196 Bacterial regulatory proteins, luxR family KSS82_13835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSS82_13835 PF00512 His Kinase A (phospho-acceptor) domain KSS82_13840 PF00581 Rhodanese-like domain KSS82_13845 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KSS82_13845 PF07992 Pyridine nucleotide-disulphide oxidoreductase KSS82_13855 PF09335 SNARE associated Golgi protein KSS82_13860 PF00528 Binding-protein-dependent transport system inner membrane component KSS82_13865 PF01263 Aldose 1-epimerase KSS82_13870 PF10509 Galactokinase galactose-binding signature KSS82_13870 PF08544 GHMP kinases C terminal KSS82_13870 PF00288 GHMP kinases N terminal domain KSS82_13875 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain KSS82_13875 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain KSS82_13880 PF16363 GDP-mannose 4,6 dehydratase KSS82_13885 PF00356 Bacterial regulatory proteins, lacI family KSS82_13900 PF02837 Glycosyl hydrolases family 2, sugar binding domain KSS82_13900 PF16353 Domain of unknown function(DUF4981) KSS82_13900 PF02836 Glycosyl hydrolases family 2, TIM barrel domain KSS82_13900 PF00703 Glycosyl hydrolases family 2 KSS82_13900 PF02929 Beta galactosidase small chain KSS82_13905 PF04074 YhcH/YjgK/YiaL KSS82_13910 PF13520 Amino acid permease KSS82_13920 PF01204 Trehalase KSS82_13925 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KSS82_13925 PF12838 4Fe-4S dicluster domain KSS82_13925 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KSS82_13925 PF00384 Molybdopterin oxidoreductase KSS82_13925 PF01568 Molydopterin dinucleotide binding domain KSS82_13940 PF00072 Response regulator receiver domain KSS82_13940 PF00990 Diguanylate cyclase, GGDEF domain KSS82_13950 PF00072 Response regulator receiver domain KSS82_13950 PF01584 CheW-like domain KSS82_13960 PF00072 Response regulator receiver domain KSS82_13960 PF12431 Transcriptional regulator KSS82_13965 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KSS82_13965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSS82_13965 PF17203 Single cache domain 3 KSS82_13965 PF00989 PAS fold KSS82_13980 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KSS82_14000 PF04204 Homoserine O-succinyltransferase KSS82_14015 PF05971 RNA methyltransferase KSS82_14020 PF01863 Protein of unknown function DUF45 KSS82_14030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSS82_14030 PF03466 LysR substrate binding domain KSS82_14050 PF02321 Outer membrane efflux protein KSS82_14055 PF05736 OprF membrane domain KSS82_14055 PF00691 OmpA family KSS82_14065 PF03435 Saccharopine dehydrogenase NADP binding domain KSS82_14065 PF16653 Saccharopine dehydrogenase C-terminal domain KSS82_14070 PF00202 Aminotransferase class-III KSS82_14075 PF06965 Na+/H+ antiporter 1 KSS82_14085 PF02687 FtsX-like permease family KSS82_14085 PF12704 MacB-like periplasmic core domain KSS82_14090 PF00005 ABC transporter KSS82_14095 PF01554 MatE KSS82_14100 PF11066 Protein of unknown function (DUF2867) KSS82_14100 PF13460 NAD(P)H-binding KSS82_14105 PF02653 Branched-chain amino acid transport system / permease component KSS82_14110 PF00005 ABC transporter KSS82_14115 PF13407 Periplasmic binding protein domain KSS82_14135 PF02954 Bacterial regulatory protein, Fis family KSS82_14135 PF00072 Response regulator receiver domain KSS82_14135 PF00158 Sigma-54 interaction domain KSS82_14140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSS82_14140 PF00512 His Kinase A (phospho-acceptor) domain KSS82_14140 PF00497 Bacterial extracellular solute-binding proteins, family 3 KSS82_14145 PF00939 Sodium:sulfate symporter transmembrane region KSS82_14150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KSS82_14150 PF00672 HAMP domain KSS82_14155 PF01168 Alanine racemase, N-terminal domain KSS82_14155 PF00842 Alanine racemase, C-terminal domain KSS82_14160 PF00892 EamA-like transporter family KSS82_14175 PF13302 Acetyltransferase (GNAT) domain KSS82_14180 PF00158 Sigma-54 interaction domain KSS82_14180 PF18024 Helix-turn-helix domain KSS82_14185 PF05128 Domain of unknown function (DUF697) KSS82_14190 PF04317 YcjX-like family, DUF463 KSS82_14205 PF00425 chorismate binding enzyme KSS82_14205 PF04715 Anthranilate synthase component I, N terminal region KSS82_14210 PF00293 NUDIX domain KSS82_14215 PF03222 Tryptophan/tyrosine permease family KSS82_14220 PF03313 Serine dehydratase alpha chain KSS82_14220 PF03315 Serine dehydratase beta chain KSS82_14255 PF01242 6-pyruvoyl tetrahydropterin synthase KSS82_14260 PF17200 Single Cache domain 2 KSS82_14260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KSS82_14260 PF00672 HAMP domain KSS82_14265 PF00152 tRNA synthetases class II (D, K and N) KSS82_14265 PF01336 OB-fold nucleic acid binding domain KSS82_14270 PF08543 Phosphomethylpyrimidine kinase KSS82_14275 PF00132 Bacterial transferase hexapeptide (six repeats) KSS82_14275 PF12464 Maltose acetyltransferase KSS82_14280 PF01966 HD domain KSS82_14280 PF00672 HAMP domain KSS82_14285 PF00155 Aminotransferase class I and II KSS82_14300 PF17200 Single Cache domain 2 KSS82_14300 PF00672 HAMP domain KSS82_14300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KSS82_14305 PF04349 Periplasmic glucan biosynthesis protein, MdoG KSS82_14310 PF13506 Glycosyl transferase family 21 KSS82_14315 PF00356 Bacterial regulatory proteins, lacI family KSS82_14320 PF04794 YdjC-like protein KSS82_14325 PF02056 Family 4 glycosyl hydrolase KSS82_14325 PF11975 Family 4 glycosyl hydrolase C-terminal domain KSS82_14330 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KSS82_14335 PF02378 Phosphotransferase system, EIIC KSS82_14340 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KSS82_14345 PF01522 Polysaccharide deacetylase KSS82_14350 PF02028 BCCT, betaine/carnitine/choline family transporter KSS82_14355 PF01047 MarR family KSS82_14360 PF00072 Response regulator receiver domain KSS82_14360 PF00196 Bacterial regulatory proteins, luxR family KSS82_14365 PF07730 Histidine kinase KSS82_14365 PF17200 Single Cache domain 2 KSS82_14370 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KSS82_14380 PF03480 Bacterial extracellular solute-binding protein, family 7 KSS82_14395 PF00753 Metallo-beta-lactamase superfamily KSS82_14400 PF05951 Bacterial protein of unknown function (DUF882) KSS82_14430 PF00925 GTP cyclohydrolase II KSS82_14440 PF07690 Major Facilitator Superfamily KSS82_14450 PF17773 UPF0176 acylphosphatase like domain KSS82_14450 PF00581 Rhodanese-like domain KSS82_14455 PF00313 'Cold-shock' DNA-binding domain KSS82_14470 PF03918 Cytochrome C biogenesis protein KSS82_14475 PF08534 Redoxin KSS82_14480 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal KSS82_14480 PF01578 Cytochrome C assembly protein KSS82_14485 PF03916 Polysulphide reductase, NrfD KSS82_14490 PF13247 4Fe-4S dicluster domain KSS82_14500 PF02335 Cytochrome c552 KSS82_14510 PF00521 DNA gyrase/topoisomerase IV, subunit A KSS82_14510 PF03989 DNA gyrase C-terminal domain, beta-propeller KSS82_14520 PF03477 ATP cone domain KSS82_14520 PF02867 Ribonucleotide reductase, barrel domain KSS82_14520 PF00317 Ribonucleotide reductase, all-alpha domain KSS82_14525 PF00268 Ribonucleotide reductase, small chain KSS82_14530 PF00970 Oxidoreductase FAD-binding domain KSS82_14530 PF00111 2Fe-2S iron-sulfur cluster binding domain KSS82_14530 PF00175 Oxidoreductase NAD-binding domain KSS82_14540 PF00994 Probable molybdopterin binding domain KSS82_14555 PF00672 HAMP domain KSS82_14555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KSS82_14555 PF17200 Single Cache domain 2 KSS82_14570 PF00005 ABC transporter KSS82_14575 PF01032 FecCD transport family KSS82_14580 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family KSS82_14590 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase KSS82_14595 PF02654 Cobalamin-5-phosphate synthase KSS82_14600 PF02277 Phosphoribosyltransferase KSS82_14605 PF01641 SelR domain KSS82_14610 PF00375 Sodium:dicarboxylate symporter family KSS82_14615 PF08411 Exonuclease C-terminal KSS82_14615 PF00929 Exonuclease KSS82_14620 PF03788 LrgA family KSS82_14625 PF04172 LrgB-like family KSS82_14630 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region KSS82_14630 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KSS82_14640 PF02222 ATP-grasp domain KSS82_14645 PF05724 Thiopurine S-methyltransferase (TPMT) KSS82_14655 PF00216 Bacterial DNA-binding protein KSS82_14660 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KSS82_14660 PF03483 B3/4 domain KSS82_14660 PF03484 tRNA synthetase B5 domain KSS82_14660 PF03147 Ferredoxin-fold anticodon binding domain KSS82_14660 PF01588 Putative tRNA binding domain KSS82_14665 PF01409 tRNA synthetases class II core domain (F) KSS82_14665 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KSS82_14670 PF00583 Acetyltransferase (GNAT) family KSS82_14675 PF03707 Bacterial signalling protein N terminal repeat KSS82_14675 PF00990 Diguanylate cyclase, GGDEF domain KSS82_14675 PF00563 EAL domain KSS82_14700 PF01066 CDP-alcohol phosphatidyltransferase KSS82_14705 PF01541 GIY-YIG catalytic domain KSS82_14705 PF02151 UvrB/uvrC motif KSS82_14705 PF08459 UvrC Helix-hairpin-helix N-terminal KSS82_14710 PF00072 Response regulator receiver domain KSS82_14710 PF00196 Bacterial regulatory proteins, luxR family KSS82_14715 PF03104 DNA polymerase family B, exonuclease domain KSS82_14715 PF00136 DNA polymerase family B KSS82_14720 PF00563 EAL domain KSS82_14720 PF13426 PAS domain KSS82_14720 PF00990 Diguanylate cyclase, GGDEF domain KSS82_14730 PF01132 Elongation factor P (EF-P) OB domain KSS82_14730 PF08207 Elongation factor P (EF-P) KOW-like domain KSS82_14730 PF09285 Elongation factor P, C-terminal KSS82_14735 PF04269 Protein of unknown function, DUF440 KSS82_14745 PF00392 Bacterial regulatory proteins, gntR family KSS82_14745 PF07702 UTRA domain KSS82_14750 PF01979 Amidohydrolase family KSS82_14755 PF00491 Arginase family KSS82_14760 PF01175 Urocanase Rossmann-like domain KSS82_14760 PF17391 Urocanase N-terminal domain KSS82_14760 PF17392 Urocanase C-terminal domain KSS82_14765 PF00221 Aromatic amino acid lyase KSS82_14775 PF00089 Trypsin KSS82_14780 PF04191 Phospholipid methyltransferase KSS82_14785 PF02913 FAD linked oxidases, C-terminal domain KSS82_14785 PF01565 FAD binding domain KSS82_14785 PF13183 4Fe-4S dicluster domain KSS82_14800 PF13488 Glycine zipper KSS82_14800 PF00691 OmpA family KSS82_14820 PF01259 SAICAR synthetase KSS82_14830 PF00390 Malic enzyme, N-terminal domain KSS82_14830 PF03949 Malic enzyme, NAD binding domain KSS82_14840 PF02698 DUF218 domain KSS82_14845 PF00990 Diguanylate cyclase, GGDEF domain KSS82_14845 PF08448 PAS fold KSS82_14850 PF00266 Aminotransferase class-V KSS82_14860 PF07992 Pyridine nucleotide-disulphide oxidoreductase KSS82_14865 PF00005 ABC transporter KSS82_14865 PF00664 ABC transporter transmembrane region KSS82_14870 PF00664 ABC transporter transmembrane region KSS82_14870 PF00005 ABC transporter KSS82_14875 PF00849 RNA pseudouridylate synthase KSS82_14875 PF01479 S4 domain KSS82_14880 PF01300 Telomere recombination KSS82_14885 PF02811 PHP domain KSS82_14890 PF08056 Tryptophan operon leader peptide KSS82_14895 PF04715 Anthranilate synthase component I, N terminal region KSS82_14895 PF00425 chorismate binding enzyme KSS82_14900 PF00117 Glutamine amidotransferase class-I KSS82_14905 PF02885 Glycosyl transferase family, helical bundle domain KSS82_14905 PF00591 Glycosyl transferase family, a/b domain KSS82_14910 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KSS82_14910 PF00218 Indole-3-glycerol phosphate synthase KSS82_14915 PF00291 Pyridoxal-phosphate dependent enzyme KSS82_14920 PF00290 Tryptophan synthase alpha chain KSS82_14925 PF00375 Sodium:dicarboxylate symporter family KSS82_14930 PF00265 Thymidine kinase KSS82_14935 PF02938 GAD domain KSS82_14935 PF01336 OB-fold nucleic acid binding domain KSS82_14935 PF00152 tRNA synthetases class II (D, K and N) KSS82_14940 PF01904 Protein of unknown function DUF72 KSS82_14945 PF13649 Methyltransferase domain KSS82_14950 PF08003 Protein of unknown function (DUF1698) KSS82_14955 PF18030 RimK PreATP-grasp domain KSS82_14955 PF08443 RimK-like ATP-grasp domain KSS82_14970 PF00266 Aminotransferase class-V KSS82_14980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSS82_14980 PF00512 His Kinase A (phospho-acceptor) domain KSS82_14980 PF00989 PAS fold KSS82_14995 PF04994 TfoX C-terminal domain KSS82_14995 PF04993 TfoX N-terminal domain KSS82_15005 PF03956 Lysine exporter LysO KSS82_15015 PF00282 Pyridoxal-dependent decarboxylase conserved domain KSS82_15020 PF01418 Helix-turn-helix domain, rpiR family KSS82_15020 PF01380 SIS domain KSS82_15025 PF00465 Iron-containing alcohol dehydrogenase KSS82_15025 PF00171 Aldehyde dehydrogenase family KSS82_15030 PF00462 Glutaredoxin KSS82_15035 PF06826 Predicted Permease Membrane Region KSS82_15035 PF02080 TrkA-C domain KSS82_15040 PF00004 ATPase family associated with various cellular activities (AAA) KSS82_15040 PF17871 AAA lid domain KSS82_15040 PF10431 C-terminal, D2-small domain, of ClpB protein KSS82_15040 PF07724 AAA domain (Cdc48 subfamily) KSS82_15040 PF02861 Clp amino terminal domain, pathogenicity island component KSS82_15045 PF02617 ATP-dependent Clp protease adaptor protein ClpS KSS82_15050 PF00313 'Cold-shock' DNA-binding domain KSS82_15055 PF03971 Monomeric isocitrate dehydrogenase KSS82_15060 PF00849 RNA pseudouridylate synthase KSS82_15065 PF01502 Phosphoribosyl-AMP cyclohydrolase KSS82_15065 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase KSS82_15070 PF00977 Histidine biosynthesis protein KSS82_15075 PF00977 Histidine biosynthesis protein KSS82_15080 PF00117 Glutamine amidotransferase class-I KSS82_15085 PF00475 Imidazoleglycerol-phosphate dehydratase KSS82_15085 PF08645 Polynucleotide kinase 3 phosphatase KSS82_15090 PF00155 Aminotransferase class I and II KSS82_15095 PF00815 Histidinol dehydrogenase KSS82_15100 PF01634 ATP phosphoribosyltransferase KSS82_15100 PF08029 HisG, C-terminal domain KSS82_15105 PF03553 Na+/H+ antiporter family KSS82_15110 PF00816 H-NS histone family KSS82_15115 PF00294 pfkB family carbohydrate kinase KSS82_15125 PF04356 Protein of unknown function (DUF489) KSS82_15130 PF08328 Adenylosuccinate lyase C-terminal KSS82_15130 PF00206 Lyase KSS82_15135 PF16036 Chalcone isomerase-like KSS82_15160 PF00106 short chain dehydrogenase KSS82_15170 PF01435 Peptidase family M48 KSS82_15185 PF08241 Methyltransferase domain KSS82_15190 PF00155 Aminotransferase class I and II KSS82_15195 PF06968 Biotin and Thiamin Synthesis associated domain KSS82_15195 PF04055 Radical SAM superfamily KSS82_15200 PF00202 Aminotransferase class-III KSS82_15205 PF02403 Seryl-tRNA synthetase N-terminal domain KSS82_15205 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KSS82_15210 PF00004 ATPase family associated with various cellular activities (AAA) KSS82_15210 PF16193 AAA C-terminal domain KSS82_15210 PF12002 MgsA AAA+ ATPase C terminal KSS82_15215 PF03548 Outer membrane lipoprotein carrier protein LolA KSS82_15220 PF07516 SecA Wing and Scaffold domain KSS82_15220 PF01043 SecA preprotein cross-linking domain KSS82_15220 PF07517 SecA DEAD-like domain KSS82_15220 PF02810 SEC-C motif KSS82_15225 PF01207 Dihydrouridine synthase (Dus) KSS82_15230 PF00990 Diguanylate cyclase, GGDEF domain KSS82_15230 PF05230 MASE2 domain KSS82_15235 PF00005 ABC transporter KSS82_15240 PF02653 Branched-chain amino acid transport system / permease component KSS82_15250 PF09905 DNA-binding protein VF530 KSS82_15255 PF04217 Protein of unknown function, DUF412 KSS82_15260 PF00871 Acetokinase family KSS82_15265 PF07085 DRTGG domain KSS82_15265 PF01515 Phosphate acetyl/butaryl transferase KSS82_15270 PF13409 Glutathione S-transferase, N-terminal domain KSS82_15275 PF00005 ABC transporter KSS82_15275 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KSS82_15280 PF00005 ABC transporter KSS82_15280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KSS82_15285 PF00528 Binding-protein-dependent transport system inner membrane component KSS82_15285 PF12911 N-terminal TM domain of oligopeptide transport permease C KSS82_15290 PF00528 Binding-protein-dependent transport system inner membrane component KSS82_15295 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KSS82_15305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSS82_15305 PF00512 His Kinase A (phospho-acceptor) domain KSS82_15310 PF00158 Sigma-54 interaction domain KSS82_15310 PF00072 Response regulator receiver domain KSS82_15310 PF02954 Bacterial regulatory protein, Fis family KSS82_15315 PF00990 Diguanylate cyclase, GGDEF domain KSS82_15315 PF13188 PAS domain KSS82_15315 PF00563 EAL domain KSS82_15315 PF03707 Bacterial signalling protein N terminal repeat KSS82_15320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSS82_15320 PF00512 His Kinase A (phospho-acceptor) domain KSS82_15325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSS82_15325 PF00512 His Kinase A (phospho-acceptor) domain KSS82_15325 PF13188 PAS domain KSS82_15325 PF13426 PAS domain KSS82_15325 PF00989 PAS fold KSS82_15335 PF00072 Response regulator receiver domain KSS82_15350 PF03481 Putative GTP-binding controlling metal-binding KSS82_15350 PF01300 Telomere recombination KSS82_15365 PF01161 Phosphatidylethanolamine-binding protein KSS82_15375 PF00704 Glycosyl hydrolases family 18 KSS82_15375 PF06483 Chitinase C KSS82_15390 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KSS82_15390 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KSS82_15395 PF01022 Bacterial regulatory protein, arsR family KSS82_15400 PF14864 Alkyl sulfatase C-terminal KSS82_15400 PF00753 Metallo-beta-lactamase superfamily KSS82_15400 PF14863 Alkyl sulfatase dimerisation KSS82_15415 PF00990 Diguanylate cyclase, GGDEF domain KSS82_15415 PF00563 EAL domain KSS82_15415 PF03707 Bacterial signalling protein N terminal repeat KSS82_15425 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KSS82_15440 PF01037 Lrp/AsnC ligand binding domain KSS82_15440 PF13404 AsnC-type helix-turn-helix domain KSS82_15445 PF00291 Pyridoxal-phosphate dependent enzyme KSS82_15450 PF01343 Peptidase family S49 KSS82_15450 PF08496 Peptidase family S49 N-terminal KSS82_15455 PF00106 short chain dehydrogenase KSS82_15465 PF03692 Putative zinc- or iron-chelating domain KSS82_15470 PF03692 Putative zinc- or iron-chelating domain KSS82_15475 PF02132 RecR protein KSS82_15475 PF13662 Toprim domain KSS82_15480 PF02575 YbaB/EbfC DNA-binding family KSS82_15485 PF12169 DNA polymerase III subunits gamma and tau domain III KSS82_15485 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding KSS82_15485 PF12170 DNA polymerase III tau subunit V interacting with alpha KSS82_15490 PF00156 Phosphoribosyl transferase domain KSS82_15495 PF04304 Protein of unknown function (DUF454) KSS82_15500 PF00072 Response regulator receiver domain KSS82_15505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSS82_15505 PF03466 LysR substrate binding domain KSS82_15510 PF00881 Nitroreductase family KSS82_15515 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KSS82_15515 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KSS82_15515 PF00378 Enoyl-CoA hydratase/isomerase KSS82_15520 PF02803 Thiolase, C-terminal domain KSS82_15520 PF00108 Thiolase, N-terminal domain KSS82_15525 PF04542 Sigma-70 region 2 KSS82_15525 PF08281 Sigma-70, region 4 KSS82_15535 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) KSS82_15540 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) KSS82_15545 PF01451 Low molecular weight phosphotyrosine protein phosphatase KSS82_15550 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP KSS82_15550 PF12557 Cob(I)alamin adenosyltransferase N terminal KSS82_15555 PF05170 AsmA family KSS82_15560 PF00485 Phosphoribulokinase / Uridine kinase family KSS82_15565 PF10609 NUBPL iron-transfer P-loop NTPase KSS82_15570 PF09334 tRNA synthetases class I (M) KSS82_15570 PF01588 Putative tRNA binding domain KSS82_15580 PF01048 Phosphorylase superfamily KSS82_15585 PF00403 Heavy-metal-associated domain KSS82_15595 PF00990 Diguanylate cyclase, GGDEF domain KSS82_15595 PF07694 5TMR of 5TMR-LYT KSS82_15600 PF02391 MoaE protein KSS82_15605 PF02597 ThiS family KSS82_15610 PF01967 MoaC family KSS82_15615 PF00994 Probable molybdopterin binding domain KSS82_15620 PF06463 Molybdenum Cofactor Synthesis C KSS82_15620 PF04055 Radical SAM superfamily KSS82_15625 PF01933 Uncharacterised protein family UPF0052 KSS82_15630 PF01627 Hpt domain KSS82_15635 PF00158 Sigma-54 interaction domain KSS82_15635 PF00072 Response regulator receiver domain KSS82_15635 PF02954 Bacterial regulatory protein, Fis family KSS82_15640 PF00271 Helicase conserved C-terminal domain KSS82_15640 PF04851 Type III restriction enzyme, res subunit KSS82_15640 PF02151 UvrB/uvrC motif KSS82_15640 PF12344 Ultra-violet resistance protein B KSS82_15640 PF17757 UvrB interaction domain KSS82_15650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSS82_15650 PF03466 LysR substrate binding domain KSS82_15655 PF00884 Sulfatase KSS82_15660 PF04055 Radical SAM superfamily KSS82_15660 PF13186 Iron-sulfur cluster-binding domain KSS82_15665 PF07726 ATPase family associated with various cellular activities (AAA) KSS82_15665 PF17863 AAA lid domain KSS82_15680 PF00092 von Willebrand factor type A domain KSS82_15700 PF02508 Rnf-Nqr subunit, membrane protein KSS82_15705 PF04060 Putative Fe-S cluster KSS82_15710 PF10531 SLBB domain KSS82_15710 PF13375 RnfC Barrel sandwich hybrid domain KSS82_15710 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KSS82_15710 PF12838 4Fe-4S dicluster domain KSS82_15715 PF03116 NQR2, RnfD, RnfE family KSS82_15720 PF04205 FMN-binding domain KSS82_15725 PF02508 Rnf-Nqr subunit, membrane protein KSS82_15730 PF10576 Iron-sulfur binding domain of endonuclease III KSS82_15730 PF00730 HhH-GPD superfamily base excision DNA repair protein KSS82_15730 PF00633 Helix-hairpin-helix motif KSS82_15735 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KSS82_15740 PF18393 MotY N-terminal domain KSS82_15740 PF00691 OmpA family KSS82_15745 PF00929 Exonuclease KSS82_15750 PF13726 Na+-H+ antiporter family KSS82_15750 PF03553 Na+/H+ antiporter family KSS82_15755 PF00156 Phosphoribosyl transferase domain KSS82_15760 PF02674 Colicin V production protein KSS82_15765 PF05036 Sporulation related domain KSS82_15770 PF02875 Mur ligase family, glutamate ligase domain KSS82_15770 PF08245 Mur ligase middle domain KSS82_15775 PF17848 Acetyl-coA carboxylase zinc finger domain KSS82_15775 PF01039 Carboxyl transferase domain KSS82_15780 PF01416 tRNA pseudouridine synthase KSS82_15790 PF00749 tRNA synthetases class I (E and Q), catalytic domain KSS82_15790 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain KSS82_15795 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KSS82_15795 PF02378 Phosphotransferase system, EIIC KSS82_15795 PF00367 phosphotransferase system, EIIB KSS82_15800 PF01979 Amidohydrolase family KSS82_15805 PF01047 MarR family KSS82_15805 PF00480 ROK family KSS82_15810 PF00999 Sodium/hydrogen exchanger family KSS82_15810 PF02254 TrkA-N domain KSS82_15815 PF00733 Asparagine synthase KSS82_15815 PF13537 Glutamine amidotransferase domain KSS82_15820 PF02357 Transcription termination factor nusG KSS82_15825 PF00854 POT family KSS82_15830 PF00762 Ferrochelatase KSS82_15835 PF05191 Adenylate kinase, active site lid KSS82_15840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSS82_15840 PF00183 Hsp90 protein KSS82_15845 PF00486 Transcriptional regulatory protein, C terminal KSS82_15850 PF17323 Trans-membrane regulatory protein ToxS KSS82_15860 PF12850 Calcineurin-like phosphoesterase superfamily domain KSS82_15865 PF08338 Domain of unknown function (DUF1731) KSS82_15865 PF01370 NAD dependent epimerase/dehydratase family KSS82_15870 PF00106 short chain dehydrogenase KSS82_15875 PF00085 Thioredoxin KSS82_15880 PF01145 SPFH domain / Band 7 family KSS82_15880 PF16200 C-terminal region of band_7 KSS82_15885 PF01957 NfeD-like C-terminal, partner-binding KSS82_15890 PF13411 MerR HTH family regulatory protein KSS82_15900 PF13609 Gram-negative porin KSS82_15905 PF00533 BRCA1 C Terminus (BRCT) domain KSS82_15905 PF01653 NAD-dependent DNA ligase adenylation domain KSS82_15905 PF03120 NAD-dependent DNA ligase OB-fold domain KSS82_15905 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KSS82_15905 PF12826 Helix-hairpin-helix motif KSS82_15910 PF04354 ZipA, C-terminal FtsZ-binding domain KSS82_15920 PF00291 Pyridoxal-phosphate dependent enzyme KSS82_15925 PF00381 PTS HPr component phosphorylation site KSS82_15930 PF00391 PEP-utilising enzyme, mobile domain KSS82_15930 PF05524 PEP-utilising enzyme, N-terminal KSS82_15930 PF02896 PEP-utilising enzyme, TIM barrel domain KSS82_15935 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KSS82_15940 PF01494 FAD binding domain KSS82_15945 PF04055 Radical SAM superfamily KSS82_15945 PF01938 TRAM domain KSS82_15945 PF00919 Uncharacterized protein family UPF0004 KSS82_15950 PF02562 PhoH-like protein KSS82_15955 PF02130 Uncharacterized protein family UPF0054 KSS82_15960 PF00571 CBS domain KSS82_15960 PF03471 Transporter associated domain KSS82_15965 PF00795 Carbon-nitrogen hydrolase KSS82_15970 PF07295 Zinc-ribbon containing domain KSS82_15975 PF00133 tRNA synthetases class I (I, L, M and V) KSS82_15975 PF13603 Leucyl-tRNA synthetase, Domain 2 KSS82_15975 PF08264 Anticodon-binding domain of tRNA KSS82_15980 PF04390 Lipopolysaccharide-assembly KSS82_15985 PF14840 Processivity clamp loader gamma complex DNA pol III C-term KSS82_15985 PF06144 DNA polymerase III, delta subunit KSS82_15995 PF02590 Predicted SPOUT methyltransferase KSS82_16000 PF03717 Penicillin-binding Protein dimerisation domain KSS82_16000 PF00905 Penicillin binding protein transpeptidase domain KSS82_16005 PF01098 Cell cycle protein KSS82_16010 PF03330 Lytic transglycolase KSS82_16010 PF05036 Sporulation related domain KSS82_16015 PF07943 Penicillin-binding protein 5, C-terminal domain KSS82_16015 PF00768 D-alanyl-D-alanine carboxypeptidase KSS82_16020 PF04359 Protein of unknown function (DUF493) KSS82_16025 PF03099 Biotin/lipoate A/B protein ligase family KSS82_16030 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family KSS82_16030 PF04055 Radical SAM superfamily KSS82_16040 PF00464 Serine hydroxymethyltransferase KSS82_16060 PF13614 AAA domain KSS82_16060 PF02706 Chain length determinant protein KSS82_16060 PF13807 G-rich domain on putative tyrosine kinase KSS82_16065 PF10531 SLBB domain KSS82_16065 PF18412 Outer-membrane lipoprotein Wza C-terminal domain KSS82_16065 PF02563 Polysaccharide biosynthesis/export protein KSS82_16075 PF02397 Bacterial sugar transferase KSS82_16095 PF12561 ToxR activated gene A lipoprotein domain KSS82_16095 PF17945 Beta/Gamma crystallin KSS82_16110 PF03808 Glycosyl transferase WecB/TagA/CpsF family KSS82_16120 PF13439 Glycosyltransferase Family 4 KSS82_16120 PF00534 Glycosyl transferases group 1 KSS82_16155 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KSS82_16155 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KSS82_16155 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KSS82_16160 PF02350 UDP-N-acetylglucosamine 2-epimerase KSS82_16165 PF01451 Low molecular weight phosphotyrosine protein phosphatase KSS82_16170 PF00873 AcrB/AcrD/AcrF family KSS82_16175 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KSS82_16210 PF00512 His Kinase A (phospho-acceptor) domain KSS82_16210 PF00672 HAMP domain KSS82_16210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSS82_16215 PF00072 Response regulator receiver domain KSS82_16215 PF00486 Transcriptional regulatory protein, C terminal KSS82_16220 PF00128 Alpha amylase, catalytic domain KSS82_16220 PF16657 Maltogenic Amylase, C-terminal domain KSS82_16225 PF00367 phosphotransferase system, EIIB KSS82_16225 PF02378 Phosphotransferase system, EIIC KSS82_16230 PF00356 Bacterial regulatory proteins, lacI family KSS82_16240 PF00005 ABC transporter KSS82_16240 PF09383 NIL domain KSS82_16245 PF00528 Binding-protein-dependent transport system inner membrane component KSS82_16250 PF03180 NLPA lipoprotein KSS82_16255 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) KSS82_16260 PF07348 Syd protein (SUKH-2) KSS82_16265 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term KSS82_16265 PF14489 QueF-like protein KSS82_16275 PF00990 Diguanylate cyclase, GGDEF domain KSS82_16280 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases KSS82_16280 PF03641 Possible lysine decarboxylase KSS82_16280 PF11892 Domain of unknown function (DUF3412) KSS82_16285 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KSS82_16285 PF01367 5'-3' exonuclease, C-terminal SAM fold KSS82_16290 PF04241 Protein of unknown function (DUF423) KSS82_16295 PF03466 LysR substrate binding domain KSS82_16295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSS82_16300 PF02568 Thiamine biosynthesis protein (ThiI) KSS82_16300 PF02926 THUMP domain KSS82_16305 PF13677 Membrane MotB of proton-channel complex MotA/MotB KSS82_16305 PF00691 OmpA family KSS82_16310 PF01618 MotA/TolQ/ExbB proton channel family KSS82_16315 PF02609 Exonuclease VII small subunit KSS82_16320 PF00348 Polyprenyl synthetase KSS82_16325 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KSS82_16325 PF02779 Transketolase, pyrimidine binding domain KSS82_16325 PF02780 Transketolase, C-terminal domain KSS82_16330 PF00849 RNA pseudouridylate synthase KSS82_16360 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 KSS82_16365 PF03806 AbgT putative transporter family KSS82_16370 PF00444 Ribosomal protein L36 KSS82_16375 PF01197 Ribosomal protein L31 KSS82_16380 PF01980 tRNA-methyltransferase O KSS82_16380 PF18389 TrmO C-terminal domain KSS82_16385 PF03129 Anticodon binding domain KSS82_16385 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KSS82_16385 PF04073 Aminoacyl-tRNA editing domain KSS82_16395 PF06786 Uncharacterised protein family (UPF0253) KSS82_16405 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal KSS82_16405 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KSS82_16405 PF02769 AIR synthase related protein, C-terminal domain KSS82_16415 PF00497 Bacterial extracellular solute-binding proteins, family 3 KSS82_16415 PF01464 Transglycosylase SLT domain KSS82_16420 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KSS82_16425 PF03806 AbgT putative transporter family KSS82_16445 PF00114 Pilin (bacterial filament) KSS82_16445 PF07963 Prokaryotic N-terminal methylation motif KSS82_16450 PF00114 Pilin (bacterial filament) KSS82_16450 PF07963 Prokaryotic N-terminal methylation motif KSS82_16455 PF00226 DnaJ domain KSS82_16455 PF00684 DnaJ central domain KSS82_16455 PF01556 DnaJ C terminal domain KSS82_16460 PF00012 Hsp70 protein KSS82_16465 PF01025 GrpE KSS82_16470 PF01513 ATP-NAD kinase KSS82_16475 PF02463 RecF/RecN/SMC N terminal domain KSS82_16480 PF04355 SmpA / OmlA family KSS82_16485 PF03658 RnfH family Ubiquitin KSS82_16490 PF03364 Polyketide cyclase / dehydrase and lipid transport KSS82_16495 PF01668 SmpB protein KSS82_16505 PF13356 Arm DNA-binding domain KSS82_16505 PF00589 Phage integrase family KSS82_16510 PF09618 CRISPR-associated protein (Cas_Csy4) KSS82_16530 PF01867 CRISPR associated protein Cas1 KSS82_16540 PF05638 Type VI secretion system effector, Hcp KSS82_16545 PF04717 Type VI secretion system, phage-baseplate injector KSS82_16595 PF04002 RadC-like JAB domain KSS82_16665 PF11953 Domain of unknown function (DUF3470) KSS82_16665 PF00037 4Fe-4S binding domain KSS82_16670 PF00588 SpoU rRNA Methylase family KSS82_16670 PF08032 RNA 2'-O ribose methyltransferase substrate binding KSS82_16680 PF12792 CSS motif domain associated with EAL KSS82_16680 PF00563 EAL domain KSS82_16695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSS82_16695 PF03466 LysR substrate binding domain KSS82_16700 PF01266 FAD dependent oxidoreductase KSS82_16705 PF01235 Sodium:alanine symporter family KSS82_16710 PF14863 Alkyl sulfatase dimerisation KSS82_16710 PF14864 Alkyl sulfatase C-terminal KSS82_16710 PF00753 Metallo-beta-lactamase superfamily KSS82_16715 PF03466 LysR substrate binding domain KSS82_16715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSS82_16720 PF01184 GPR1/FUN34/yaaH family KSS82_16725 PF06483 Chitinase C KSS82_16725 PF00704 Glycosyl hydrolases family 18 KSS82_16730 PF13676 TIR domain KSS82_16790 PF13361 UvrD-like helicase C-terminal domain KSS82_16790 PF00580 UvrD/REP helicase N-terminal domain KSS82_16795 PF02463 RecF/RecN/SMC N terminal domain KSS82_16800 PF13356 Arm DNA-binding domain KSS82_16800 PF00589 Phage integrase family KSS82_16805 PF00117 Glutamine amidotransferase class-I KSS82_16805 PF00958 GMP synthase C terminal domain KSS82_16805 PF02540 NAD synthase KSS82_16810 PF00571 CBS domain KSS82_16810 PF00478 IMP dehydrogenase / GMP reductase domain KSS82_16815 PF13742 OB-fold nucleic acid binding domain KSS82_16815 PF02601 Exonuclease VII, large subunit KSS82_16830 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KSS82_16830 PF01926 50S ribosome-binding GTPase KSS82_16835 PF13360 PQQ-like domain KSS82_16840 PF09976 Tetratricopeptide repeat-like domain KSS82_16845 PF03129 Anticodon binding domain KSS82_16845 PF13393 Histidyl-tRNA synthetase KSS82_16850 PF04551 GcpE protein KSS82_16855 PF13464 Domain of unknown function (DUF4115) KSS82_16860 PF04055 Radical SAM superfamily KSS82_16865 PF00334 Nucleoside diphosphate kinase KSS82_16870 PF12404 Peptidase KSS82_16870 PF00883 Cytosol aminopeptidase family, catalytic domain KSS82_16875 PF04384 Iron-sulphur cluster assembly KSS82_16880 PF00111 2Fe-2S iron-sulfur cluster binding domain KSS82_16885 PF00012 Hsp70 protein KSS82_16890 PF00226 DnaJ domain KSS82_16890 PF07743 HSCB C-terminal oligomerisation domain KSS82_16895 PF01521 Iron-sulphur cluster biosynthesis KSS82_16900 PF01592 NifU-like N terminal domain KSS82_16905 PF00266 Aminotransferase class-V KSS82_16910 PF02082 Transcriptional regulator KSS82_16915 PF00588 SpoU rRNA Methylase family KSS82_16920 PF00459 Inositol monophosphatase family KSS82_16925 PF02355 Protein export membrane protein KSS82_16925 PF07549 SecD/SecF GG Motif KSS82_16930 PF13721 SecD export protein N-terminal TM region KSS82_16930 PF07549 SecD/SecF GG Motif KSS82_16930 PF02355 Protein export membrane protein KSS82_16935 PF02699 Preprotein translocase subunit KSS82_16940 PF01702 Queuine tRNA-ribosyltransferase KSS82_16945 PF02547 Queuosine biosynthesis protein KSS82_16950 PF00571 CBS domain KSS82_16955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KSS82_16960 PF00463 Isocitrate lyase family KSS82_16965 PF01274 Malate synthase KSS82_16970 PF03466 LysR substrate binding domain KSS82_16970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSS82_16975 PF00578 AhpC/TSA family KSS82_16975 PF10417 C-terminal domain of 1-Cys peroxiredoxin KSS82_16980 PF03932 CutC family KSS82_16985 PF03976 Polyphosphate kinase 2 (PPK2) KSS82_16990 PF01895 PhoU domain KSS82_16995 PF00005 ABC transporter KSS82_17000 PF00528 Binding-protein-dependent transport system inner membrane component KSS82_17005 PF00528 Binding-protein-dependent transport system inner membrane component KSS82_17010 PF02503 Polyphosphate kinase middle domain KSS82_17010 PF13090 Polyphosphate kinase C-terminal domain 2 KSS82_17010 PF17941 Polyphosphate kinase C-terminal domain 1 KSS82_17010 PF13089 Polyphosphate kinase N-terminal domain KSS82_17015 PF02541 Ppx/GppA phosphatase family KSS82_17020 PF12849 PBP superfamily domain KSS82_17025 PF11808 Phosphate regulon sensor protein PhoR KSS82_17025 PF00512 His Kinase A (phospho-acceptor) domain KSS82_17025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSS82_17025 PF00989 PAS fold KSS82_17030 PF00072 Response regulator receiver domain KSS82_17030 PF00486 Transcriptional regulatory protein, C terminal KSS82_17035 PF04381 Putative exonuclease, RdgC KSS82_17040 PF01136 Peptidase family U32 KSS82_17040 PF16325 Peptidase family U32 C-terminal domain KSS82_17045 PF00037 4Fe-4S binding domain KSS82_17050 PF00881 Nitroreductase family KSS82_17090 PF10431 C-terminal, D2-small domain, of ClpB protein KSS82_17090 PF02861 Clp amino terminal domain, pathogenicity island component KSS82_17090 PF00004 ATPase family associated with various cellular activities (AAA) KSS82_17090 PF17871 AAA lid domain KSS82_17090 PF07724 AAA domain (Cdc48 subfamily) KSS82_17095 PF02578 Multi-copper polyphenol oxidoreductase laccase KSS82_17100 PF00849 RNA pseudouridylate synthase KSS82_17100 PF01479 S4 domain KSS82_17105 PF13525 Outer membrane lipoprotein KSS82_17110 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KSS82_17115 PF01817 Chorismate mutase type II KSS82_17115 PF00800 Prephenate dehydratase KSS82_17120 PF13416 Bacterial extracellular solute-binding protein KSS82_17125 PF00563 EAL domain KSS82_17125 PF00990 Diguanylate cyclase, GGDEF domain KSS82_17130 PF01931 Protein of unknown function DUF84 KSS82_17135 PF01371 Trp repressor protein KSS82_17140 PF14718 Soluble lytic murein transglycosylase L domain KSS82_17140 PF01464 Transglycosylase SLT domain KSS82_17145 PF00005 ABC transporter KSS82_17145 PF12848 ABC transporter KSS82_17150 PF07238 PilZ domain KSS82_17155 PF01817 Chorismate mutase type II KSS82_17155 PF02153 Prephenate dehydrogenase KSS82_17160 PF00793 DAHP synthetase I family KSS82_17165 PF07694 5TMR of 5TMR-LYT KSS82_17165 PF06580 Histidine kinase KSS82_17170 PF00072 Response regulator receiver domain KSS82_17170 PF04397 LytTr DNA-binding domain KSS82_17175 PF00933 Glycosyl hydrolase family 3 N terminal domain KSS82_17180 PF03702 Anhydro-N-acetylmuramic acid kinase KSS82_17185 PF13580 SIS domain KSS82_17200 PF02554 Carbon starvation protein CstA KSS82_17205 PF02401 LytB protein KSS82_17210 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KSS82_17215 PF01252 Signal peptidase (SPase) II KSS82_17220 PF06827 Zinc finger found in FPG and IleRS KSS82_17220 PF00133 tRNA synthetases class I (I, L, M and V) KSS82_17220 PF08264 Anticodon-binding domain of tRNA KSS82_17225 PF01687 Riboflavin kinase KSS82_17225 PF06574 FAD synthetase KSS82_17230 PF03023 Lipid II flippase MurJ KSS82_17235 PF01649 Ribosomal protein S20 KSS82_17240 PF01022 Bacterial regulatory protein, arsR family KSS82_17245 PF03466 LysR substrate binding domain KSS82_17245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSS82_17250 PF02690 Na+/Pi-cotransporter KSS82_17255 PF00303 Thymidylate synthase KSS82_17260 PF01790 Prolipoprotein diacylglyceryl transferase KSS82_17265 PF01925 Sulfite exporter TauE/SafE KSS82_17270 PF02896 PEP-utilising enzyme, TIM barrel domain KSS82_17270 PF01590 GAF domain KSS82_17270 PF05524 PEP-utilising enzyme, N-terminal KSS82_17270 PF00391 PEP-utilising enzyme, mobile domain KSS82_17275 PF00293 NUDIX domain KSS82_17280 PF02976 DNA mismatch repair enzyme MutH KSS82_17285 PF00248 Aldo/keto reductase family KSS82_17295 PF02954 Bacterial regulatory protein, Fis family KSS82_17295 PF00072 Response regulator receiver domain KSS82_17295 PF00158 Sigma-54 interaction domain KSS82_17300 PF00152 tRNA synthetases class II (D, K and N) KSS82_17300 PF01336 OB-fold nucleic acid binding domain KSS82_17310 PF05525 Branched-chain amino acid transport protein KSS82_17315 PF05175 Methyltransferase small domain KSS82_17320 PF00270 DEAD/DEAH box helicase KSS82_17320 PF00271 Helicase conserved C-terminal domain KSS82_17325 PF00009 Elongation factor Tu GTP binding domain KSS82_17325 PF03144 Elongation factor Tu domain 2 KSS82_17325 PF16658 Class II release factor RF3, C-terminal domain KSS82_17330 PF03707 Bacterial signalling protein N terminal repeat KSS82_17330 PF00990 Diguanylate cyclase, GGDEF domain KSS82_17330 PF00563 EAL domain KSS82_17345 PF13508 Acetyltransferase (GNAT) domain KSS82_17350 PF02036 SCP-2 sterol transfer family KSS82_17355 PF03707 Bacterial signalling protein N terminal repeat KSS82_17355 PF00990 Diguanylate cyclase, GGDEF domain KSS82_17355 PF00563 EAL domain KSS82_17360 PF01136 Peptidase family U32 KSS82_17365 PF01136 Peptidase family U32 KSS82_17375 PF01047 MarR family KSS82_17380 PF07719 Tetratricopeptide repeat KSS82_17380 PF13181 Tetratricopeptide repeat KSS82_17385 PF03725 3' exoribonuclease family, domain 2 KSS82_17385 PF00013 KH domain KSS82_17385 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KSS82_17385 PF01138 3' exoribonuclease family, domain 1 KSS82_17385 PF00575 S1 RNA binding domain KSS82_17390 PF00312 Ribosomal protein S15 KSS82_17395 PF01509 TruB family pseudouridylate synthase (N terminal domain) KSS82_17395 PF16198 tRNA pseudouridylate synthase B C-terminal domain KSS82_17395 PF09157 Pseudouridine synthase II TruB, C-terminal KSS82_17400 PF02033 Ribosome-binding factor A KSS82_17405 PF11987 Translation-initiation factor 2 KSS82_17405 PF00009 Elongation factor Tu GTP binding domain KSS82_17405 PF04760 Translation initiation factor IF-2, N-terminal region KSS82_17405 PF08364 Bacterial translation initiation factor IF-2 associated region KSS82_17410 PF13184 NusA-like KH domain KSS82_17410 PF08529 NusA N-terminal domain KSS82_17410 PF00575 S1 RNA binding domain KSS82_17415 PF02576 RimP N-terminal domain KSS82_17415 PF17384 RimP C-terminal SH3 domain KSS82_17430 PF03840 Preprotein translocase SecG subunit KSS82_17435 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KSS82_17435 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KSS82_17435 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KSS82_17435 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KSS82_17440 PF00809 Pterin binding enzyme KSS82_17445 PF01434 Peptidase family M41 KSS82_17445 PF06480 FtsH Extracellular KSS82_17445 PF17862 AAA+ lid domain KSS82_17445 PF00004 ATPase family associated with various cellular activities (AAA) KSS82_17450 PF01728 FtsJ-like methyltransferase KSS82_17455 PF01985 CRS1 / YhbY (CRM) domain KSS82_17460 PF03449 Transcription elongation factor, N-terminal KSS82_17460 PF01272 Transcription elongation factor, GreA/GreB, C-term KSS82_17465 PF13609 Gram-negative porin KSS82_17470 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family KSS82_17475 PF01479 S4 domain KSS82_17475 PF00579 tRNA synthetases class I (W and Y) KSS82_17480 PF04225 Opacity-associated protein A LysM-like domain KSS82_17480 PF01551 Peptidase family M23 KSS82_17485 PF00873 AcrB/AcrD/AcrF family KSS82_17495 PF01521 Iron-sulphur cluster biosynthesis KSS82_17500 PF00202 Aminotransferase class-III KSS82_17510 PF01594 AI-2E family transporter KSS82_17515 PF05175 Methyltransferase small domain KSS82_17515 PF08468 Methyltransferase small domain N-terminal KSS82_17520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSS82_17520 PF00512 His Kinase A (phospho-acceptor) domain KSS82_17520 PF01627 Hpt domain KSS82_17520 PF00072 Response regulator receiver domain KSS82_17520 PF00497 Bacterial extracellular solute-binding proteins, family 3 KSS82_17525 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KSS82_17530 PF00528 Binding-protein-dependent transport system inner membrane component KSS82_17535 PF00528 Binding-protein-dependent transport system inner membrane component KSS82_17535 PF12911 N-terminal TM domain of oligopeptide transport permease C KSS82_17540 PF00005 ABC transporter KSS82_17540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KSS82_17545 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KSS82_17545 PF00005 ABC transporter KSS82_17555 PF01869 BadF/BadG/BcrA/BcrD ATPase family KSS82_17560 PF00728 Glycosyl hydrolase family 20, catalytic domain KSS82_17560 PF02838 Glycosyl hydrolase family 20, domain 2 KSS82_17565 PF06165 Glycosyltransferase family 36 KSS82_17565 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain KSS82_17570 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KSS82_17570 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KSS82_17570 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KSS82_17570 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KSS82_17575 PF00005 ABC transporter KSS82_17575 PF08402 TOBE domain KSS82_17580 PF00528 Binding-protein-dependent transport system inner membrane component KSS82_17585 PF13416 Bacterial extracellular solute-binding protein KSS82_17590 PF00909 Ammonium Transporter Family KSS82_17595 PF00543 Nitrogen regulatory protein P-II KSS82_17600 PF06062 Uncharacterised protein family (UPF0231) KSS82_17605 PF00330 Aconitase family (aconitate hydratase) KSS82_17605 PF11791 Aconitate B N-terminal domain KSS82_17605 PF06434 Aconitate hydratase 2 N-terminus KSS82_17610 PF01734 Patatin-like phospholipase KSS82_17615 PF00905 Penicillin binding protein transpeptidase domain KSS82_17615 PF00912 Transglycosylase KSS82_17615 PF14814 Bifunctional transglycosylase second domain KSS82_17620 PF00271 Helicase conserved C-terminal domain KSS82_17620 PF08482 ATP-dependent helicase C-terminal KSS82_17620 PF00270 DEAD/DEAH box helicase KSS82_17620 PF04408 Helicase associated domain (HA2) KSS82_17630 PF03749 Sugar fermentation stimulation protein RE domain KSS82_17630 PF17746 SfsA N-terminal OB domain KSS82_17635 PF01258 Prokaryotic dksA/traR C4-type zinc finger KSS82_17640 PF00749 tRNA synthetases class I (E and Q), catalytic domain KSS82_17645 PF01743 Poly A polymerase head domain KSS82_17645 PF12626 Polymerase A arginine-rich C-terminus KSS82_17645 PF12627 Probable RNA and SrmB- binding site of polymerase A KSS82_17650 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KSS82_17655 PF02548 Ketopantoate hydroxymethyltransferase KSS82_17660 PF02569 Pantoate-beta-alanine ligase KSS82_17665 PF01061 ABC-2 type transporter KSS82_17670 PF00005 ABC transporter KSS82_17675 PF01740 STAS domain KSS82_17675 PF00916 Sulfate permease family KSS82_17680 PF00484 Carbonic anhydrase KSS82_17685 PF00156 Phosphoribosyl transferase domain KSS82_17690 PF00440 Bacterial regulatory proteins, tetR family KSS82_17695 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KSS82_17700 PF04348 LppC putative lipoprotein KSS82_17705 PF02021 Uncharacterised protein family UPF0102 KSS82_17710 PF13580 SIS domain KSS82_17715 PF04972 BON domain KSS82_17720 PF04386 Stringent starvation protein B KSS82_17725 PF00043 Glutathione S-transferase, C-terminal domain KSS82_17725 PF02798 Glutathione S-transferase, N-terminal domain KSS82_17730 PF02167 Cytochrome C1 family KSS82_17735 PF00033 Cytochrome b/b6/petB KSS82_17735 PF00032 Cytochrome b(C-terminal)/b6/petD KSS82_17740 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal KSS82_17740 PF00355 Rieske [2Fe-2S] domain KSS82_17745 PF00380 Ribosomal protein S9/S16 KSS82_17750 PF00572 Ribosomal protein L13 KSS82_17755 PF03969 AFG1-like ATPase KSS82_17765 PF00595 PDZ domain KSS82_17770 PF13180 PDZ domain KSS82_17775 PF01245 Ribosomal protein L19 KSS82_17780 PF01746 tRNA (Guanine-1)-methyltransferase KSS82_17785 PF01782 RimM N-terminal domain KSS82_17785 PF05239 PRC-barrel domain KSS82_17790 PF00886 Ribosomal protein S16 KSS82_17795 PF00448 SRP54-type protein, GTPase domain KSS82_17795 PF02881 SRP54-type protein, helical bundle domain KSS82_17795 PF02978 Signal peptide binding domain KSS82_17800 PF01578 Cytochrome C assembly protein KSS82_17805 PF03471 Transporter associated domain KSS82_17805 PF00571 CBS domain KSS82_17805 PF01595 Cyclin M transmembrane N-terminal domain KSS82_17810 PF02664 S-Ribosylhomocysteinase (LuxS) KSS82_17815 PF04262 Glutamate-cysteine ligase KSS82_17820 PF00675 Insulinase (Peptidase family M16) KSS82_17820 PF05193 Peptidase M16 inactive domain KSS82_17825 PF09335 SNARE associated Golgi protein KSS82_17830 PF08240 Alcohol dehydrogenase GroES-like domain KSS82_17830 PF00107 Zinc-binding dehydrogenase KSS82_17835 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit KSS82_17840 PF00364 Biotin-requiring enzyme KSS82_17840 PF00682 HMGL-like KSS82_17840 PF02436 Conserved carboxylase domain KSS82_17845 PF04277 Oxaloacetate decarboxylase, gamma chain KSS82_17890 PF02599 Global regulator protein family KSS82_17895 PF00696 Amino acid kinase family KSS82_17895 PF01842 ACT domain KSS82_17895 PF13840 ACT domain KSS82_17900 PF01411 tRNA synthetases class II (A) KSS82_17900 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KSS82_17900 PF02272 DHHA1 domain KSS82_17905 PF02631 RecX family KSS82_17910 PF00154 recA bacterial DNA recombination protein KSS82_17915 PF02464 Competence-damaged protein KSS82_17925 PF00005 ABC transporter KSS82_17925 PF12857 TOBE-like domain KSS82_17930 PF00528 Binding-protein-dependent transport system inner membrane component KSS82_17935 PF00528 Binding-protein-dependent transport system inner membrane component KSS82_17945 PF00291 Pyridoxal-phosphate dependent enzyme KSS82_17950 PF01624 MutS domain I KSS82_17950 PF05188 MutS domain II KSS82_17950 PF05192 MutS domain III KSS82_17950 PF05190 MutS family domain IV KSS82_17950 PF00488 MutS domain V KSS82_17955 PF04545 Sigma-70, region 4 KSS82_17955 PF00140 Sigma-70 factor, region 1.2 KSS82_17955 PF04542 Sigma-70 region 2 KSS82_17955 PF04539 Sigma-70 region 3 KSS82_17960 PF01476 LysM domain KSS82_17960 PF01551 Peptidase family M23 KSS82_17970 PF01975 Survival protein SurE KSS82_17975 PF01142 tRNA pseudouridine synthase D (TruD) KSS82_17980 PF02542 YgbB family KSS82_17985 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KSS82_17990 PF04977 Septum formation initiator KSS82_17995 PF02673 Bacitracin resistance protein BacA KSS82_18000 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KSS82_18005 PF02152 Dihydroneopterin aldolase KSS82_18010 PF02660 Glycerol-3-phosphate acyltransferase KSS82_18015 PF00561 alpha/beta hydrolase fold KSS82_18020 PF00814 Glycoprotease family KSS82_18025 PF01165 Ribosomal protein S21 KSS82_18030 PF09424 Yqey-like protein KSS82_18035 PF10410 DnaB-helicase binding domain of primase KSS82_18035 PF08275 DNA primase catalytic core, N-terminal domain KSS82_18035 PF08278 DNA primase DnaG DnaB-binding KSS82_18035 PF01807 CHC2 zinc finger KSS82_18040 PF04546 Sigma-70, non-essential region KSS82_18040 PF03979 Sigma-70 factor, region 1.1 KSS82_18040 PF00140 Sigma-70 factor, region 1.2 KSS82_18040 PF04542 Sigma-70 region 2 KSS82_18040 PF04539 Sigma-70 region 3 KSS82_18040 PF04545 Sigma-70, region 4 KSS82_18050 PF13356 Arm DNA-binding domain KSS82_18050 PF00589 Phage integrase family KSS82_18080 PF04002 RadC-like JAB domain KSS82_18115 PF07510 Protein of unknown function (DUF1524) KSS82_18160 PF00075 RNase H KSS82_18200 PF03480 Bacterial extracellular solute-binding protein, family 7 KSS82_18205 PF01380 SIS domain KSS82_18210 PF08220 DeoR-like helix-turn-helix domain KSS82_18210 PF00455 DeoR C terminal sensor domain KSS82_18215 PF00224 Pyruvate kinase, barrel domain KSS82_18215 PF02887 Pyruvate kinase, alpha/beta domain KSS82_18225 PF04402 Protein of unknown function (DUF541) KSS82_18230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSS82_18230 PF03466 LysR substrate binding domain KSS82_18235 PF01810 LysE type translocator KSS82_18240 PF05552 Conserved TM helix KSS82_18240 PF00924 Mechanosensitive ion channel KSS82_18245 PF01116 Fructose-bisphosphate aldolase class-II KSS82_18250 PF00162 Phosphoglycerate kinase KSS82_18255 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KSS82_18255 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KSS82_18260 PF07715 TonB-dependent Receptor Plug Domain KSS82_18260 PF00593 TonB dependent receptor KSS82_18265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSS82_18265 PF03466 LysR substrate binding domain KSS82_18270 PF00456 Transketolase, thiamine diphosphate binding domain KSS82_18270 PF02780 Transketolase, C-terminal domain KSS82_18270 PF02779 Transketolase, pyrimidine binding domain KSS82_18275 PF00438 S-adenosylmethionine synthetase, N-terminal domain KSS82_18275 PF02773 S-adenosylmethionine synthetase, C-terminal domain KSS82_18275 PF02772 S-adenosylmethionine synthetase, central domain KSS82_18280 PF17283 SprT-like zinc ribbon domain KSS82_18280 PF10263 SprT-like family KSS82_18285 PF04231 Endonuclease I KSS82_18290 PF04452 RNA methyltransferase KSS82_18295 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain KSS82_18295 PF02951 Prokaryotic glutathione synthetase, N-terminal domain KSS82_18300 PF02622 Uncharacterized ACR, COG1678 KSS82_18305 PF03652 Holliday junction resolvase KSS82_18310 PF00579 tRNA synthetases class I (W and Y) KSS82_18310 PF01479 S4 domain KSS82_18320 PF00437 Type II/IV secretion system protein KSS82_18325 PF00437 Type II/IV secretion system protein KSS82_18330 PF01168 Alanine racemase, N-terminal domain KSS82_18335 PF03807 NADP oxidoreductase coenzyme F420-dependent KSS82_18335 PF14748 Pyrroline-5-carboxylate reductase dimerisation KSS82_18340 PF02325 YGGT family KSS82_18345 PF02594 Uncharacterised ACR, YggU family COG1872 KSS82_18355 PF01725 Ham1 family KSS82_18360 PF04055 Radical SAM superfamily KSS82_18360 PF06969 HemN C-terminal domain KSS82_18370 PF04960 Glutaminase KSS82_18375 PF02390 Putative methyltransferase KSS82_18380 PF00730 HhH-GPD superfamily base excision DNA repair protein KSS82_18380 PF10576 Iron-sulfur binding domain of endonuclease III KSS82_18380 PF14815 NUDIX domain KSS82_18380 PF00633 Helix-hairpin-helix motif KSS82_18385 PF04362 Bacterial Fe(2+) trafficking KSS82_18390 PF01464 Transglycosylase SLT domain KSS82_18390 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain KSS82_18445 PF05099 Tellurite resistance protein TerB KSS82_18445 PF00226 DnaJ domain KSS82_18450 PF03968 OstA-like protein KSS82_18450 PF04453 LPS transport system D KSS82_18455 PF09312 SurA N-terminal domain KSS82_18460 PF04166 Pyridoxal phosphate biosynthetic protein PdxA KSS82_18465 PF00398 Ribosomal RNA adenine dimethylase KSS82_18470 PF04379 ApaG domain KSS82_18475 PF00149 Calcineurin-like phosphoesterase KSS82_18480 PF00186 Dihydrofolate reductase KSS82_18485 PF12821 Threonine/Serine exporter, ThrE KSS82_18490 PF06738 Putative threonine/serine exporter KSS82_18495 PF01926 50S ribosome-binding GTPase KSS82_18495 PF01018 GTP1/OBG KSS82_18500 PF01016 Ribosomal L27 protein KSS82_18505 PF00829 Ribosomal prokaryotic L21 protein KSS82_18510 PF00348 Polyprenyl synthetase KSS82_18515 PF13520 Amino acid permease KSS82_18520 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KSS82_18520 PF00056 lactate/malate dehydrogenase, NAD binding domain KSS82_18525 PF02863 Arginine repressor, C-terminal domain KSS82_18525 PF01316 Arginine repressor, DNA binding domain KSS82_18540 PF00582 Universal stress protein family KSS82_18555 PF06877 Regulator of ribonuclease activity B KSS82_18565 PF00111 2Fe-2S iron-sulfur cluster binding domain KSS82_18565 PF00970 Oxidoreductase FAD-binding domain KSS82_18565 PF00175 Oxidoreductase NAD-binding domain KSS82_18570 PF03063 Prismane/CO dehydrogenase family KSS82_18575 PF01523 Putative modulator of DNA gyrase KSS82_18580 PF00795 Carbon-nitrogen hydrolase KSS82_18585 PF13116 Protein of unknown function KSS82_18585 PF13502 AsmA-like C-terminal region KSS82_18590 PF10150 Ribonuclease E/G family KSS82_18590 PF00575 S1 RNA binding domain KSS82_18595 PF02545 Maf-like protein KSS82_18600 PF04093 rod shape-determining protein MreD KSS82_18605 PF04085 rod shape-determining protein MreC KSS82_18640 PF07963 Prokaryotic N-terminal methylation motif KSS82_18645 PF07963 Prokaryotic N-terminal methylation motif KSS82_18655 PF00482 Type II secretion system (T2SS), protein F KSS82_18660 PF00437 Type II/IV secretion system protein KSS82_18660 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KSS82_18670 PF13401 AAA domain KSS82_18670 PF01471 Putative peptidoglycan binding domain KSS82_18675 PF00263 Bacterial type II and III secretion system protein KSS82_18675 PF03958 Bacterial type II/III secretion system short domain KSS82_18675 PF07660 Secretin and TonB N terminus short domain KSS82_18675 PF11741 AMIN domain KSS82_18675 PF00263 Bacterial type II and III secretion system protein KSS82_18675 PF03958 Bacterial type II/III secretion system short domain KSS82_18675 PF07660 Secretin and TonB N terminus short domain KSS82_18675 PF11741 AMIN domain KSS82_18695 PF00563 EAL domain KSS82_18695 PF17157 Gammaproteobacterial periplasmic sensor domain KSS82_18695 PF00990 Diguanylate cyclase, GGDEF domain KSS82_18700 PF00436 Single-strand binding protein family KSS82_18705 PF00196 Bacterial regulatory proteins, luxR family KSS82_18710 PF00483 Nucleotidyl transferase KSS82_18715 PF00005 ABC transporter KSS82_18715 PF17755 UvrA DNA-binding domain KSS82_18715 PF17760 UvrA interaction domain KSS82_18725 PF00266 Aminotransferase class-V KSS82_18730 PF00696 Amino acid kinase family KSS82_18730 PF01842 ACT domain KSS82_18735 PF02310 B12 binding domain KSS82_18735 PF02607 B12 binding domain KSS82_18735 PF02965 Vitamin B12 dependent methionine synthase, activation domain KSS82_18735 PF00809 Pterin binding enzyme KSS82_18735 PF02574 Homocysteine S-methyltransferase KSS82_18740 PF00999 Sodium/hydrogen exchanger family KSS82_18785 PF01507 Phosphoadenosine phosphosulfate reductase family KSS82_18790 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KSS82_18790 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KSS82_18795 PF00667 FAD binding domain KSS82_18795 PF00258 Flavodoxin KSS82_18795 PF00175 Oxidoreductase NAD-binding domain KSS82_18810 PF09583 Phage shock protein G (Phageshock_PspG) KSS82_18815 PF01207 Dihydrouridine synthase (Dus) KSS82_18835 PF00004 ATPase family associated with various cellular activities (AAA) KSS82_18835 PF17862 AAA+ lid domain KSS82_18835 PF01434 Peptidase family M41 KSS82_18840 PF02796 Helix-turn-helix domain of resolvase KSS82_18840 PF00239 Resolvase, N terminal domain KSS82_18880 PF06122 Conjugative relaxosome accessory transposon protein KSS82_18930 PF01475 Ferric uptake regulator family KSS82_18940 PF00342 Phosphoglucose isomerase KSS82_18945 PF01894 Uncharacterised protein family UPF0047 KSS82_18950 PF00842 Alanine racemase, C-terminal domain KSS82_18950 PF01168 Alanine racemase, N-terminal domain KSS82_18955 PF00772 DnaB-like helicase N terminal domain KSS82_18955 PF03796 DnaB-like helicase C terminal domain KSS82_18965 PF03948 Ribosomal protein L9, C-terminal domain KSS82_18965 PF01281 Ribosomal protein L9, N-terminal domain KSS82_18970 PF01084 Ribosomal protein S18 KSS82_18975 PF00436 Single-strand binding protein family KSS82_18980 PF01250 Ribosomal protein S6 KSS82_18985 PF00210 Ferritin-like domain KSS82_18990 PF04324 BFD-like [2Fe-2S] binding domain KSS82_18995 PF00009 Elongation factor Tu GTP binding domain KSS82_18995 PF03144 Elongation factor Tu domain 2 KSS82_18995 PF03143 Elongation factor Tu C-terminal domain KSS82_19000 PF14492 Elongation Factor G, domain II KSS82_19000 PF03764 Elongation factor G, domain IV KSS82_19000 PF00009 Elongation factor Tu GTP binding domain KSS82_19000 PF03144 Elongation factor Tu domain 2 KSS82_19000 PF00679 Elongation factor G C-terminus KSS82_19005 PF00177 Ribosomal protein S7p/S5e KSS82_19010 PF00164 Ribosomal protein S12/S23 KSS82_19020 PF02635 DsrE/DsrF-like family KSS82_19025 PF02635 DsrE/DsrF-like family KSS82_19030 PF08348 YheO-like PAS domain KSS82_19030 PF13309 HTH domain KSS82_19035 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KSS82_19035 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KSS82_19045 PF04102 SlyX KSS82_19050 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) KSS82_19055 PF01145 SPFH domain / Band 7 family KSS82_19060 PF01145 SPFH domain / Band 7 family KSS82_19060 PF12221 Bacterial membrane protein N terminal KSS82_19065 PF16360 GTP-binding GTPase Middle Region KSS82_19065 PF01926 50S ribosome-binding GTPase KSS82_19065 PF13167 GTP-binding GTPase N-terminal KSS82_19070 PF17209 Hfq protein KSS82_19080 PF08676 MutL C terminal dimerisation domain KSS82_19080 PF01119 DNA mismatch repair protein, C-terminal domain KSS82_19085 PF01520 N-acetylmuramoyl-L-alanine amidase KSS82_19090 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KSS82_19095 PF08331 Domain of unknown function (DUF1730) KSS82_19140 PF00929 Exonuclease KSS82_19145 PF03193 RsgA GTPase KSS82_19150 PF02666 Phosphatidylserine decarboxylase KSS82_19155 PF00939 Sodium:sulfate symporter transmembrane region KSS82_19165 PF01676 Metalloenzyme superfamily KSS82_19165 PF06415 BPG-independent PGAM N-terminus (iPGM_N) KSS82_19170 PF01551 Peptidase family M23 KSS82_19180 PF08360 QacR-like protein, C-terminal region KSS82_19180 PF00440 Bacterial regulatory proteins, tetR family KSS82_19185 PF01208 Uroporphyrinogen decarboxylase (URO-D) KSS82_19190 PF00293 NUDIX domain KSS82_19190 PF09297 NADH pyrophosphatase zinc ribbon domain KSS82_19195 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ KSS82_19200 PF04997 RNA polymerase Rpb1, domain 1 KSS82_19200 PF04998 RNA polymerase Rpb1, domain 5 KSS82_19200 PF05000 RNA polymerase Rpb1, domain 4 KSS82_19200 PF04983 RNA polymerase Rpb1, domain 3 KSS82_19200 PF00623 RNA polymerase Rpb1, domain 2 KSS82_19205 PF04560 RNA polymerase Rpb2, domain 7 KSS82_19205 PF00562 RNA polymerase Rpb2, domain 6 KSS82_19205 PF04563 RNA polymerase beta subunit KSS82_19205 PF04561 RNA polymerase Rpb2, domain 2 KSS82_19205 PF04565 RNA polymerase Rpb2, domain 3 KSS82_19205 PF10385 RNA polymerase beta subunit external 1 domain KSS82_19210 PF00542 Ribosomal protein L7/L12 C-terminal domain KSS82_19210 PF16320 Ribosomal protein L7/L12 dimerisation domain KSS82_19215 PF00466 Ribosomal protein L10 KSS82_19220 PF00687 Ribosomal protein L1p/L10e family KSS82_19225 PF03946 Ribosomal protein L11, N-terminal domain KSS82_19225 PF00298 Ribosomal protein L11, RNA binding domain KSS82_19230 PF00467 KOW motif KSS82_19230 PF02357 Transcription termination factor nusG KSS82_19235 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KSS82_19240 PF00009 Elongation factor Tu GTP binding domain KSS82_19240 PF03143 Elongation factor Tu C-terminal domain KSS82_19240 PF03144 Elongation factor Tu domain 2 KSS82_19265 PF00485 Phosphoribulokinase / Uridine kinase family KSS82_19270 PF02237 Biotin protein ligase C terminal domain KSS82_19270 PF03099 Biotin/lipoate A/B protein ligase family KSS82_19270 PF08279 HTH domain KSS82_19275 PF01565 FAD binding domain KSS82_19275 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KSS82_19285 PF13091 PLD-like domain KSS82_19320 PF00175 Oxidoreductase NAD-binding domain KSS82_19325 PF00111 2Fe-2S iron-sulfur cluster binding domain KSS82_19325 PF00175 Oxidoreductase NAD-binding domain KSS82_19325 PF00970 Oxidoreductase FAD-binding domain KSS82_19330 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase KSS82_19340 PF07498 Rho termination factor, N-terminal domain KSS82_19340 PF07497 Rho termination factor, RNA-binding domain KSS82_19340 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KSS82_19345 PF00085 Thioredoxin KSS82_19350 PF00270 DEAD/DEAH box helicase KSS82_19350 PF00271 Helicase conserved C-terminal domain KSS82_19355 PF02541 Ppx/GppA phosphatase family KSS82_19360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSS82_19360 PF00512 His Kinase A (phospho-acceptor) domain KSS82_19360 PF00989 PAS fold KSS82_19365 PF12832 MFS_1 like family KSS82_19380 PF13193 AMP-binding enzyme C-terminal domain KSS82_19380 PF00501 AMP-binding enzyme KSS82_19380 PF16177 Acetyl-coenzyme A synthetase N-terminus KSS82_19385 PF01220 Dehydroquinase class II KSS82_19390 PF00364 Biotin-requiring enzyme KSS82_19395 PF02785 Biotin carboxylase C-terminal domain KSS82_19395 PF00289 Biotin carboxylase, N-terminal domain KSS82_19395 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KSS82_19405 PF01207 Dihydrouridine synthase (Dus) KSS82_19410 PF02954 Bacterial regulatory protein, Fis family KSS82_19415 PF00356 Bacterial regulatory proteins, lacI family KSS82_19415 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KSS82_19420 PF11647 Membrane Localization Domain KSS82_19425 PF00920 Dehydratase family KSS82_19430 PF01202 Shikimate kinase KSS82_19435 PF02447 GntP family permease KSS82_19440 PF01081 KDPG and KHG aldolase KSS82_19445 PF00593 TonB dependent receptor KSS82_19445 PF07715 TonB-dependent Receptor Plug Domain KSS82_19455 PF17200 Single Cache domain 2 KSS82_19455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KSS82_19455 PF00672 HAMP domain KSS82_19460 PF01276 Orn/Lys/Arg decarboxylase, major domain KSS82_19460 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain KSS82_19460 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain KSS82_19465 PF13520 Amino acid permease KSS82_19470 PF00486 Transcriptional regulatory protein, C terminal KSS82_19470 PF18500 CadC C-terminal domain 1 KSS82_19475 PF13411 MerR HTH family regulatory protein KSS82_19485 PF02142 MGS-like domain KSS82_19485 PF01808 AICARFT/IMPCHase bienzyme KSS82_19490 PF02844 Phosphoribosylglycinamide synthetase, N domain KSS82_19490 PF02843 Phosphoribosylglycinamide synthetase, C domain KSS82_19490 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KSS82_19500 PF00216 Bacterial DNA-binding protein KSS82_19505 PF00571 CBS domain KSS82_19505 PF01595 Cyclin M transmembrane N-terminal domain KSS82_19510 PF04222 Protein of unknown function (DUF416) KSS82_19515 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KSS82_19520 PF03167 Uracil DNA glycosylase superfamily KSS82_19525 PF00924 Mechanosensitive ion channel KSS82_19530 PF10996 Beta-Casp domain KSS82_19530 PF00753 Metallo-beta-lactamase superfamily KSS82_19530 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KSS82_19535 PF02719 Polysaccharide biosynthesis protein KSS82_19540 PF02397 Bacterial sugar transferase KSS82_19545 PF01370 NAD dependent epimerase/dehydratase family KSS82_19555 PF02350 UDP-N-acetylglucosamine 2-epimerase KSS82_19560 PF01370 NAD dependent epimerase/dehydratase family KSS82_19565 PF08485 Polysaccharide biosynthesis protein C-terminal KSS82_19565 PF02719 Polysaccharide biosynthesis protein KSS82_19570 PF00977 Histidine biosynthesis protein KSS82_19575 PF00117 Glutamine amidotransferase class-I KSS82_19580 PF02540 NAD synthase KSS82_19580 PF00795 Carbon-nitrogen hydrolase KSS82_19610 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KSS82_19615 PF00551 Formyl transferase KSS82_19615 PF02911 Formyl transferase, C-terminal domain KSS82_19620 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 KSS82_19625 PF00483 Nucleotidyl transferase KSS82_19630 PF16363 GDP-mannose 4,6 dehydratase KSS82_19635 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KSS82_19640 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD KSS82_19640 PF00132 Bacterial transferase hexapeptide (six repeats) KSS82_19645 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KSS82_19645 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KSS82_19645 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KSS82_19650 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KSS82_19650 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KSS82_19655 PF02706 Chain length determinant protein KSS82_19660 PF01370 NAD dependent epimerase/dehydratase family KSS82_19665 PF00457 Glycosyl hydrolases family 11 KSS82_19665 PF01522 Polysaccharide deacetylase KSS82_19680 PF01075 Glycosyltransferase family 9 (heptosyltransferase) KSS82_19690 PF04488 Glycosyltransferase sugar-binding region containing DXD motif KSS82_19695 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) KSS82_19720 PF00132 Bacterial transferase hexapeptide (six repeats) KSS82_19730 PF01075 Glycosyltransferase family 9 (heptosyltransferase) KSS82_19735 PF00535 Glycosyl transferase family 2 KSS82_19740 PF01075 Glycosyltransferase family 9 (heptosyltransferase) KSS82_19745 PF01467 Cytidylyltransferase-like KSS82_19750 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KSS82_19750 PF06827 Zinc finger found in FPG and IleRS KSS82_19750 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KSS82_19760 PF00471 Ribosomal protein L33 KSS82_19765 PF00830 Ribosomal L28 family KSS82_19770 PF04002 RadC-like JAB domain KSS82_19775 PF00672 HAMP domain KSS82_19775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KSS82_19775 PF17200 Single Cache domain 2 KSS82_19780 PF02441 Flavoprotein KSS82_19780 PF04127 DNA / pantothenate metabolism flavoprotein KSS82_19790 PF00440 Bacterial regulatory proteins, tetR family KSS82_19795 PF03279 Bacterial lipid A biosynthesis acyltransferase KSS82_19800 PF03279 Bacterial lipid A biosynthesis acyltransferase KSS82_19805 PF00156 Phosphoribosyl transferase domain KSS82_19810 PF03725 3' exoribonuclease family, domain 2 KSS82_19810 PF01138 3' exoribonuclease family, domain 1 KSS82_19815 PF03755 YicC-like family, N-terminal region KSS82_19815 PF08340 Domain of unknown function (DUF1732) KSS82_19820 PF03350 Uncharacterized protein family, UPF0114 KSS82_19825 PF00267 Gram-negative porin KSS82_19830 PF00367 phosphotransferase system, EIIB KSS82_19830 PF02378 Phosphotransferase system, EIIC KSS82_19835 PF13580 SIS domain KSS82_19840 PF01418 Helix-turn-helix domain, rpiR family KSS82_19840 PF01380 SIS domain KSS82_19845 PF01032 FecCD transport family KSS82_19850 PF01497 Periplasmic binding protein KSS82_19855 PF00005 ABC transporter KSS82_19860 PF07715 TonB-dependent Receptor Plug Domain KSS82_19860 PF00593 TonB dependent receptor KSS82_19865 PF00664 ABC transporter transmembrane region KSS82_19865 PF00005 ABC transporter KSS82_19875 PF16124 RecQ zinc-binding KSS82_19875 PF00271 Helicase conserved C-terminal domain KSS82_19875 PF09382 RQC domain KSS82_19875 PF00570 HRDC domain KSS82_19875 PF00270 DEAD/DEAH box helicase KSS82_19880 PF00892 EamA-like transporter family KSS82_19890 PF00672 HAMP domain KSS82_19890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KSS82_19890 PF12729 Four helix bundle sensory module for signal transduction KSS82_19895 PF00580 UvrD/REP helicase N-terminal domain KSS82_19895 PF13361 UvrD-like helicase C-terminal domain KSS82_19905 PF05114 Protein of unknown function (DUF692) KSS82_19920 PF01432 Peptidase family M3 KSS82_19925 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ KSS82_19930 PF07992 Pyridine nucleotide-disulphide oxidoreductase KSS82_19930 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KSS82_19970 PF01734 Patatin-like phospholipase KSS82_19995 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KSS82_20005 PF00528 Binding-protein-dependent transport system inner membrane component KSS82_20005 PF12911 N-terminal TM domain of oligopeptide transport permease C KSS82_20010 PF00528 Binding-protein-dependent transport system inner membrane component KSS82_20015 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KSS82_20020 PF00005 ABC transporter KSS82_20020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KSS82_20050 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KSS82_20090 PF00437 Type II/IV secretion system protein KSS82_20105 PF00263 Bacterial type II and III secretion system protein KSS82_20105 PF13629 Pilus formation protein N terminal region KSS82_20105 PF04972 BON domain KSS82_20135 PF00580 UvrD/REP helicase N-terminal domain KSS82_20135 PF13361 UvrD-like helicase C-terminal domain KSS82_20140 PF00440 Bacterial regulatory proteins, tetR family KSS82_20145 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KSS82_20150 PF00873 AcrB/AcrD/AcrF family KSS82_20155 PF04380 Membrane fusogenic activity KSS82_20160 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KSS82_20160 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KSS82_20165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSS82_20165 PF03466 LysR substrate binding domain KSS82_20230 PF12724 Flavodoxin domain KSS82_20235 PF02386 Cation transport protein KSS82_20240 PF09186 Domain of unknown function (DUF1949) KSS82_20240 PF01205 Uncharacterized protein family UPF0029 KSS82_20245 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KSS82_20245 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KSS82_20245 PF00378 Enoyl-CoA hydratase/isomerase KSS82_20250 PF02803 Thiolase, C-terminal domain KSS82_20250 PF00108 Thiolase, N-terminal domain KSS82_20255 PF03466 LysR substrate binding domain KSS82_20255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSS82_20260 PF07690 Major Facilitator Superfamily KSS82_20265 PF00132 Bacterial transferase hexapeptide (six repeats) KSS82_20265 PF12804 MobA-like NTP transferase domain KSS82_20270 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain KSS82_20270 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KSS82_20275 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KSS82_20275 PF02874 ATP synthase alpha/beta family, beta-barrel domain KSS82_20280 PF00231 ATP synthase KSS82_20285 PF02874 ATP synthase alpha/beta family, beta-barrel domain KSS82_20285 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KSS82_20285 PF00306 ATP synthase alpha/beta chain, C terminal domain KSS82_20290 PF00213 ATP synthase delta (OSCP) subunit KSS82_20295 PF00430 ATP synthase B/B' CF(0) KSS82_20300 PF00137 ATP synthase subunit C KSS82_20305 PF00119 ATP synthase A chain KSS82_20310 PF03899 ATP synthase I chain KSS82_20315 PF02195 ParB-like nuclease domain KSS82_20315 PF17762 HTH domain found in ParB protein KSS82_20320 PF13614 AAA domain KSS82_20325 PF02527 rRNA small subunit methyltransferase G KSS82_20330 PF01134 Glucose inhibited division protein A KSS82_20330 PF13932 GidA associated domain KSS82_20335 PF00258 Flavodoxin KSS82_20340 PF01926 50S ribosome-binding GTPase KSS82_20340 PF12631 MnmE helical domain KSS82_20340 PF10396 GTP-binding protein TrmE N-terminus KSS82_20345 PF02096 60Kd inner membrane protein KSS82_20345 PF14849 YidC periplasmic domain KSS82_20350 PF01809 Putative membrane protein insertion efficiency factor KSS82_20355 PF00825 Ribonuclease P KSS82_20360 PF00468 Ribosomal protein L34 KSS82_20365 PF00005 ABC transporter KSS82_20370 PF00528 Binding-protein-dependent transport system inner membrane component KSS82_20375 PF00497 Bacterial extracellular solute-binding proteins, family 3