locus-tag class description NP431_00005 PF00308 Bacterial dnaA protein NP431_00005 PF08299 Bacterial dnaA protein helix-turn-helix NP431_00005 PF11638 DnaA N-terminal domain NP431_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain NP431_00010 PF02767 DNA polymerase III beta subunit, central domain NP431_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain NP431_00015 PF02463 RecF/RecN/SMC N terminal domain NP431_00020 PF01751 Toprim domain NP431_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP431_00020 PF00986 DNA gyrase B subunit, carboxyl terminus NP431_00020 PF00204 DNA gyrase B NP431_00020 PF18053 DNA gyrase B subunit insert domain NP431_00025 PF00011 Hsp20/alpha crystallin family NP431_00030 PF00155 Aminotransferase class I and II NP431_00035 PF00128 Alpha amylase, catalytic domain NP431_00040 PF02092 Glycyl-tRNA synthetase beta subunit NP431_00040 PF05746 DALR anticodon binding domain NP431_00045 PF02091 Glycyl-tRNA synthetase alpha subunit NP431_00050 PF01169 Uncharacterized protein family UPF0016 NP431_00060 PF01206 Sulfurtransferase TusA NP431_00070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_00070 PF03466 LysR substrate binding domain NP431_00075 PF08240 Alcohol dehydrogenase GroES-like domain NP431_00075 PF00107 Zinc-binding dehydrogenase NP431_00080 PF00108 Thiolase, N-terminal domain NP431_00080 PF02803 Thiolase, C-terminal domain NP431_00085 PF00378 Enoyl-CoA hydratase/isomerase NP431_00085 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NP431_00085 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NP431_00090 PF09186 Domain of unknown function (DUF1949) NP431_00090 PF01205 Uncharacterized protein family UPF0029 NP431_00095 PF02386 Cation transport protein NP431_00100 PF12724 Flavodoxin domain NP431_00135 PF02378 Phosphotransferase system, EIIC NP431_00135 PF00367 phosphotransferase system, EIIB NP431_00140 PF00512 His Kinase A (phospho-acceptor) domain NP431_00140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP431_00145 PF00072 Response regulator receiver domain NP431_00145 PF00486 Transcriptional regulatory protein, C terminal NP431_00150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_00150 PF03466 LysR substrate binding domain NP431_00155 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NP431_00155 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NP431_00160 PF04380 Membrane fusogenic activity NP431_00165 PF00873 AcrB/AcrD/AcrF family NP431_00170 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NP431_00175 PF00440 Bacterial regulatory proteins, tetR family NP431_00180 PF00580 UvrD/REP helicase N-terminal domain NP431_00180 PF13361 UvrD-like helicase C-terminal domain NP431_00185 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NP431_00220 PF00005 ABC transporter NP431_00220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NP431_00225 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NP431_00230 PF00528 Binding-protein-dependent transport system inner membrane component NP431_00235 PF12911 N-terminal TM domain of oligopeptide transport permease C NP431_00235 PF00528 Binding-protein-dependent transport system inner membrane component NP431_00245 PF00356 Bacterial regulatory proteins, lacI family NP431_00245 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NP431_00250 PF00920 Dehydratase family NP431_00255 PF01202 Shikimate kinase NP431_00260 PF02447 GntP family permease NP431_00265 PF01081 KDPG and KHG aldolase NP431_00270 PF06228 Haem utilisation ChuX/HutX NP431_00275 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NP431_00275 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP431_00280 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ NP431_00285 PF01432 Peptidase family M3 NP431_00290 PF01037 Lrp/AsnC ligand binding domain NP431_00295 PF04445 Putative SAM-dependent methyltransferase NP431_00305 PF00892 EamA-like transporter family NP431_00310 PF00582 Universal stress protein family NP431_00315 PF00210 Ferritin-like domain NP431_00320 PF10625 Universal stress protein B (UspB) NP431_00355 PF00263 Bacterial type II and III secretion system protein NP431_00355 PF04972 BON domain NP431_00355 PF13629 Pilus formation protein N terminal region NP431_00370 PF00437 Type II/IV secretion system protein NP431_00405 PF01243 Pyridoxamine 5'-phosphate oxidase NP431_00415 PF00664 ABC transporter transmembrane region NP431_00415 PF00005 ABC transporter NP431_00420 PF00664 ABC transporter transmembrane region NP431_00420 PF00005 ABC transporter NP431_00430 PF03707 Bacterial signalling protein N terminal repeat NP431_00430 PF00990 Diguanylate cyclase, GGDEF domain NP431_00430 PF00563 EAL domain NP431_00440 PF02646 RmuC family NP431_00445 PF01209 ubiE/COQ5 methyltransferase family NP431_00450 PF02036 SCP-2 sterol transfer family NP431_00455 PF03109 ABC1 family NP431_00460 PF02416 mttA/Hcf106 family NP431_00465 PF02416 mttA/Hcf106 family NP431_00470 PF00902 Sec-independent protein translocase protein (TatC) NP431_00475 PF03471 Transporter associated domain NP431_00475 PF00999 Sodium/hydrogen exchanger family NP431_00475 PF02080 TrkA-C domain NP431_00480 PF01026 TatD related DNase NP431_00485 PF00490 Delta-aminolevulinic acid dehydratase NP431_00495 PF01367 5'-3' exonuclease, C-terminal SAM fold NP431_00495 PF00476 DNA polymerase family A NP431_00495 PF01612 3'-5' exonuclease NP431_00495 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NP431_00500 PF01926 50S ribosome-binding GTPase NP431_00505 PF00034 Cytochrome c NP431_00520 PF04220 Der GTPase activator (YihI) NP431_00525 PF10675 Protein of unknown function (DUF2489) NP431_00530 PF06969 HemN C-terminal domain NP431_00530 PF04055 Radical SAM superfamily NP431_00535 PF00962 Adenosine/AMP deaminase NP431_00540 PF00563 EAL domain NP431_00540 PF00990 Diguanylate cyclase, GGDEF domain NP431_00540 PF03707 Bacterial signalling protein N terminal repeat NP431_00545 PF02954 Bacterial regulatory protein, Fis family NP431_00545 PF00072 Response regulator receiver domain NP431_00545 PF00158 Sigma-54 interaction domain NP431_00550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP431_00550 PF00989 PAS fold NP431_00550 PF00512 His Kinase A (phospho-acceptor) domain NP431_00560 PF00120 Glutamine synthetase, catalytic domain NP431_00560 PF03951 Glutamine synthetase, beta-Grasp domain NP431_00565 PF00009 Elongation factor Tu GTP binding domain NP431_00565 PF03144 Elongation factor Tu domain 2 NP431_00565 PF00679 Elongation factor G C-terminus NP431_00580 PF03631 Virulence factor BrkB NP431_00585 PF02580 D-Tyr-tRNA(Tyr) deacylase NP431_00590 PF00583 Acetyltransferase (GNAT) family NP431_00590 PF09500 Putative thioesterase (yiiD_Cterm) NP431_00600 PF01293 Phosphoenolpyruvate carboxykinase NP431_00605 PF01430 Hsp33 protein NP431_00610 PF01479 S4 domain NP431_00615 PF11356 Type II secretion system protein C NP431_00620 PF00263 Bacterial type II and III secretion system protein NP431_00620 PF03958 Bacterial type II/III secretion system short domain NP431_00625 PF00437 Type II/IV secretion system protein NP431_00630 PF00482 Type II secretion system (T2SS), protein F NP431_00635 PF07963 Prokaryotic N-terminal methylation motif NP431_00635 PF08334 Type II secretion system (T2SS), protein G NP431_00640 PF12019 Type II transport protein GspH NP431_00645 PF02501 Type II secretion system (T2SS), protein I NP431_00645 PF07963 Prokaryotic N-terminal methylation motif NP431_00650 PF11612 Type II secretion system (T2SS), protein J NP431_00650 PF07963 Prokaryotic N-terminal methylation motif NP431_00655 PF03934 Type II secretion system (T2SS), protein K NP431_00660 PF05134 Type II secretion system (T2SS), protein L NP431_00660 PF12693 GspL periplasmic domain NP431_00665 PF04612 Type II secretion system (T2SS), protein M NP431_00670 PF01203 Type II secretion system (T2SS), protein N NP431_00675 PF00459 Inositol monophosphatase family NP431_00680 PF00293 NUDIX domain NP431_00685 PF01521 Iron-sulphur cluster biosynthesis NP431_00685 PF01106 NifU-like domain NP431_00690 PF00156 Phosphoribosyl transferase domain NP431_00695 PF00561 alpha/beta hydrolase fold NP431_00705 PF17674 HHH domain NP431_00705 PF09371 Tex-like protein N-terminal domain NP431_00705 PF16921 Tex protein YqgF-like domain NP431_00705 PF00575 S1 RNA binding domain NP431_00715 PF01272 Transcription elongation factor, GreA/GreB, C-term NP431_00715 PF03449 Transcription elongation factor, N-terminal NP431_00725 PF00072 Response regulator receiver domain NP431_00725 PF00486 Transcriptional regulatory protein, C terminal NP431_00730 PF00672 HAMP domain NP431_00730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP431_00730 PF00512 His Kinase A (phospho-acceptor) domain NP431_00735 PF00860 Permease family NP431_00740 PF00271 Helicase conserved C-terminal domain NP431_00740 PF17191 RecG wedge domain NP431_00740 PF00270 DEAD/DEAH box helicase NP431_00745 PF12105 SpoU, rRNA methylase, C-terminal NP431_00745 PF00588 SpoU rRNA Methylase family NP431_00750 PF13291 ACT domain NP431_00750 PF04607 Region found in RelA / SpoT proteins NP431_00750 PF02824 TGS domain NP431_00755 PF01192 RNA polymerase Rpb6 NP431_00760 PF00625 Guanylate kinase NP431_00775 PF02472 Biopolymer transport protein ExbD/TolR NP431_00780 PF01618 MotA/TolQ/ExbB proton channel family NP431_00795 PF00593 TonB dependent receptor NP431_00795 PF07715 TonB-dependent Receptor Plug Domain NP431_00800 PF00528 Binding-protein-dependent transport system inner membrane component NP431_00805 PF00528 Binding-protein-dependent transport system inner membrane component NP431_00805 PF12911 N-terminal TM domain of oligopeptide transport permease C NP431_00810 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NP431_00815 PF00005 ABC transporter NP431_00815 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NP431_00820 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NP431_00820 PF00005 ABC transporter NP431_00845 PF08340 Domain of unknown function (DUF1732) NP431_00845 PF03755 YicC-like family, N-terminal region NP431_00850 PF01138 3' exoribonuclease family, domain 1 NP431_00850 PF03725 3' exoribonuclease family, domain 2 NP431_00855 PF00156 Phosphoribosyl transferase domain NP431_00860 PF03279 Bacterial lipid A biosynthesis acyltransferase NP431_00865 PF00440 Bacterial regulatory proteins, tetR family NP431_00870 PF02441 Flavoprotein NP431_00870 PF04127 DNA / pantothenate metabolism flavoprotein NP431_00875 PF04002 RadC-like JAB domain NP431_00880 PF00830 Ribosomal L28 family NP431_00885 PF00471 Ribosomal protein L33 NP431_00895 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NP431_00895 PF06827 Zinc finger found in FPG and IleRS NP431_00895 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NP431_00900 PF01467 Cytidylyltransferase-like NP431_00905 PF13439 Glycosyltransferase Family 4 NP431_00905 PF00534 Glycosyl transferases group 1 NP431_00910 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NP431_00920 PF13439 Glycosyltransferase Family 4 NP431_00920 PF00534 Glycosyl transferases group 1 NP431_00925 PF01219 Prokaryotic diacylglycerol kinase NP431_00935 PF03275 UDP-galactopyranose mutase NP431_00950 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) NP431_00955 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NP431_00960 PF03279 Bacterial lipid A biosynthesis acyltransferase NP431_00965 PF01370 NAD dependent epimerase/dehydratase family NP431_00970 PF06082 Exopolysaccharide biosynthesis protein YbjH NP431_00990 PF00953 Glycosyl transferase family 4 NP431_00995 PF00009 Elongation factor Tu GTP binding domain NP431_01010 PF01507 Phosphoadenosine phosphosulfate reductase family NP431_01015 PF03600 Citrate transporter NP431_01015 PF02080 TrkA-C domain NP431_01020 PF00005 ABC transporter NP431_01060 PF00483 Nucleotidyl transferase NP431_01085 PF16363 GDP-mannose 4,6 dehydratase NP431_01090 PF04321 RmlD substrate binding domain NP431_01105 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase NP431_01110 PF00483 Nucleotidyl transferase NP431_01120 PF01061 ABC-2 type transporter NP431_01125 PF02563 Polysaccharide biosynthesis/export protein NP431_01125 PF10531 SLBB domain NP431_01135 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NP431_01135 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NP431_01135 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NP431_01140 PF18412 Outer-membrane lipoprotein Wza C-terminal domain NP431_01140 PF02563 Polysaccharide biosynthesis/export protein NP431_01140 PF10531 SLBB domain NP431_01145 PF01451 Low molecular weight phosphotyrosine protein phosphatase NP431_01150 PF13807 G-rich domain on putative tyrosine kinase NP431_01150 PF13614 AAA domain NP431_01150 PF02706 Chain length determinant protein NP431_01155 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NP431_01155 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NP431_01155 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NP431_01165 PF01370 NAD dependent epimerase/dehydratase family NP431_01185 PF13439 Glycosyltransferase Family 4 NP431_01185 PF00534 Glycosyl transferases group 1 NP431_01190 PF00535 Glycosyl transferase family 2 NP431_01190 PF02709 N-terminal domain of galactosyltransferase NP431_01195 PF00534 Glycosyl transferases group 1 NP431_01195 PF13439 Glycosyltransferase Family 4 NP431_01205 PF02397 Bacterial sugar transferase NP431_01215 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NP431_01220 PF02719 Polysaccharide biosynthesis protein NP431_01225 PF10996 Beta-Casp domain NP431_01225 PF00753 Metallo-beta-lactamase superfamily NP431_01225 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain NP431_01235 PF00121 Triosephosphate isomerase NP431_01245 PF05686 Glycosyl transferase family 90 NP431_01250 PF05656 Protein of unknown function (DUF805) NP431_01260 PF08220 DeoR-like helix-turn-helix domain NP431_01260 PF00455 DeoR C terminal sensor domain NP431_01265 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded NP431_01270 PF06005 Cell division protein ZapB NP431_01275 PF03737 Aldolase/RraA NP431_01280 PF01040 UbiA prenyltransferase family NP431_01285 PF00004 ATPase family associated with various cellular activities (AAA) NP431_01285 PF07724 AAA domain (Cdc48 subfamily) NP431_01290 PF00227 Proteasome subunit NP431_01300 PF00356 Bacterial regulatory proteins, lacI family NP431_01305 PF00270 DEAD/DEAH box helicase NP431_01305 PF17764 3′ DNA-binding domain (3′BD) NP431_01305 PF18074 Primosomal protein N C-terminal domain NP431_01305 PF18319 PriA DNA helicase Cys-rich region (CRR) domain NP431_01305 PF00271 Helicase conserved C-terminal domain NP431_01310 PF01197 Ribosomal protein L31 NP431_01315 PF00338 Ribosomal protein S10p/S20e NP431_01320 PF00297 Ribosomal protein L3 NP431_01325 PF00573 Ribosomal protein L4/L1 family NP431_01330 PF00276 Ribosomal protein L23 NP431_01335 PF03947 Ribosomal Proteins L2, C-terminal domain NP431_01335 PF00181 Ribosomal Proteins L2, RNA binding domain NP431_01340 PF00203 Ribosomal protein S19 NP431_01345 PF00237 Ribosomal protein L22p/L17e NP431_01350 PF00189 Ribosomal protein S3, C-terminal domain NP431_01350 PF07650 KH domain NP431_01355 PF00252 Ribosomal protein L16p/L10e NP431_01360 PF00831 Ribosomal L29 protein NP431_01365 PF00366 Ribosomal protein S17 NP431_01370 PF00238 Ribosomal protein L14p/L23e NP431_01375 PF00467 KOW motif NP431_01375 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NP431_01380 PF00673 ribosomal L5P family C-terminus NP431_01380 PF00281 Ribosomal protein L5 NP431_01385 PF00253 Ribosomal protein S14p/S29e NP431_01390 PF00410 Ribosomal protein S8 NP431_01395 PF00347 Ribosomal protein L6 NP431_01400 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NP431_01405 PF00333 Ribosomal protein S5, N-terminal domain NP431_01405 PF03719 Ribosomal protein S5, C-terminal domain NP431_01410 PF00327 Ribosomal protein L30p/L7e NP431_01415 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NP431_01420 PF00344 SecY translocase NP431_01425 PF00444 Ribosomal protein L36 NP431_01430 PF00416 Ribosomal protein S13/S18 NP431_01435 PF00411 Ribosomal protein S11 NP431_01440 PF00163 Ribosomal protein S4/S9 N-terminal domain NP431_01440 PF01479 S4 domain NP431_01445 PF01000 RNA polymerase Rpb3/RpoA insert domain NP431_01445 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NP431_01445 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NP431_01450 PF01196 Ribosomal protein L17 NP431_01460 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NP431_01460 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NP431_01470 PF13673 Acetyltransferase (GNAT) domain NP431_01475 PF00271 Helicase conserved C-terminal domain NP431_01475 PF00270 DEAD/DEAH box helicase NP431_01475 PF03880 DbpA RNA binding domain NP431_01485 PF02872 5'-nucleotidase, C-terminal domain NP431_01485 PF00149 Calcineurin-like phosphoesterase NP431_01490 PF10414 Sirohaem synthase dimerisation region NP431_01490 PF14824 Sirohaem biosynthesis protein central NP431_01490 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NP431_01495 PF01507 Phosphoadenosine phosphosulfate reductase family NP431_01500 PF00009 Elongation factor Tu GTP binding domain NP431_01505 PF02080 TrkA-C domain NP431_01505 PF03600 Citrate transporter NP431_01530 PF00005 ABC transporter NP431_01540 PF10795 Protein of unknown function (DUF2607) NP431_01545 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) NP431_01550 PF06526 Protein of unknown function (DUF1107) NP431_01555 PF01625 Peptide methionine sulfoxide reductase NP431_01560 PF01103 Surface antigen NP431_01560 PF07244 Surface antigen variable number repeat NP431_01560 PF17243 POTRA domain TamA domain 1 NP431_01565 PF04357 TamB, inner membrane protein subunit of TAM complex NP431_01570 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like NP431_01575 PF00719 Inorganic pyrophosphatase NP431_01580 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain NP431_01585 PF01225 Mur ligase family, catalytic domain NP431_01585 PF02875 Mur ligase family, glutamate ligase domain NP431_01585 PF08245 Mur ligase middle domain NP431_01590 PF02441 Flavoprotein NP431_01600 PF00528 Binding-protein-dependent transport system inner membrane component NP431_01605 PF00005 ABC transporter NP431_01610 PF00582 Universal stress protein family NP431_01625 PF02863 Arginine repressor, C-terminal domain NP431_01625 PF01316 Arginine repressor, DNA binding domain NP431_01630 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NP431_01630 PF00056 lactate/malate dehydrogenase, NAD binding domain NP431_01640 PF00348 Polyprenyl synthetase NP431_01645 PF00829 Ribosomal prokaryotic L21 protein NP431_01650 PF01016 Ribosomal L27 protein NP431_01655 PF01018 GTP1/OBG NP431_01655 PF01926 50S ribosome-binding GTPase NP431_01660 PF06738 Putative threonine/serine exporter NP431_01665 PF12821 Threonine/Serine exporter, ThrE NP431_01670 PF00186 Dihydrofolate reductase NP431_01675 PF00149 Calcineurin-like phosphoesterase NP431_01680 PF04379 ApaG domain NP431_01685 PF00398 Ribosomal RNA adenine dimethylase NP431_01690 PF04166 Pyridoxal phosphate biosynthetic protein PdxA NP431_01695 PF09312 SurA N-terminal domain NP431_01700 PF04453 LPS transport system D NP431_01700 PF03968 OstA-like protein NP431_01705 PF05099 Tellurite resistance protein TerB NP431_01705 PF00226 DnaJ domain NP431_01715 PF00694 Aconitase C-terminal domain NP431_01720 PF00330 Aconitase family (aconitate hydratase) NP431_01725 PF00180 Isocitrate/isopropylmalate dehydrogenase NP431_01730 PF00682 HMGL-like NP431_01730 PF08502 LeuA allosteric (dimerisation) domain NP431_01740 PF01569 PAP2 superfamily NP431_01750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_01750 PF03466 LysR substrate binding domain NP431_01755 PF00501 AMP-binding enzyme NP431_01760 PF00205 Thiamine pyrophosphate enzyme, central domain NP431_01760 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NP431_01760 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NP431_01765 PF10369 Small subunit of acetolactate synthase NP431_01770 PF00224 Pyruvate kinase, barrel domain NP431_01770 PF02887 Pyruvate kinase, alpha/beta domain NP431_01775 PF00455 DeoR C terminal sensor domain NP431_01775 PF08220 DeoR-like helix-turn-helix domain NP431_01780 PF01380 SIS domain NP431_01785 PF01418 Helix-turn-helix domain, rpiR family NP431_01785 PF01380 SIS domain NP431_01790 PF00367 phosphotransferase system, EIIB NP431_01790 PF02378 Phosphotransferase system, EIIC NP431_01795 PF13580 SIS domain NP431_01800 PF05068 Mannitol repressor NP431_01805 PF08125 Mannitol dehydrogenase C-terminal domain NP431_01805 PF01232 Mannitol dehydrogenase Rossmann domain NP431_01810 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NP431_01810 PF02378 Phosphotransferase system, EIIC NP431_01810 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NP431_01820 PF01979 Amidohydrolase family NP431_01845 PF03180 NLPA lipoprotein NP431_01850 PF00669 Bacterial flagellin N-terminal helical region NP431_01850 PF00700 Bacterial flagellin C-terminal helical region NP431_01850 PF07196 Flagellin hook IN motif NP431_01860 PF04542 Sigma-70 region 2 NP431_01860 PF00140 Sigma-70 factor, region 1.2 NP431_01860 PF03979 Sigma-70 factor, region 1.1 NP431_01860 PF04539 Sigma-70 region 3 NP431_01860 PF04546 Sigma-70, non-essential region NP431_01860 PF04545 Sigma-70, region 4 NP431_01865 PF08278 DNA primase DnaG DnaB-binding NP431_01865 PF08275 DNA primase catalytic core, N-terminal domain NP431_01865 PF01807 CHC2 zinc finger NP431_01865 PF10410 DnaB-helicase binding domain of primase NP431_01870 PF09424 Yqey-like protein NP431_01875 PF01165 Ribosomal protein S21 NP431_01880 PF00814 Glycoprotease family NP431_01885 PF00561 alpha/beta hydrolase fold NP431_01890 PF02660 Glycerol-3-phosphate acyltransferase NP431_01895 PF02152 Dihydroneopterin aldolase NP431_01900 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NP431_01905 PF02673 Bacitracin resistance protein BacA NP431_01910 PF01966 HD domain NP431_01910 PF01743 Poly A polymerase head domain NP431_01910 PF12627 Probable RNA and SrmB- binding site of polymerase A NP431_01915 PF13401 AAA domain NP431_01915 PF01471 Putative peptidoglycan binding domain NP431_01925 PF08239 Bacterial SH3 domain NP431_01930 PF01384 Phosphate transporter family NP431_01935 PF01865 Protein of unknown function DUF47 NP431_01940 PF01928 CYTH domain NP431_01950 PF00672 HAMP domain NP431_01950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP431_01950 PF02743 Cache domain NP431_01955 PF08335 GlnD PII-uridylyltransferase NP431_01955 PF03710 Glutamate-ammonia ligase adenylyltransferase NP431_01960 PF01467 Cytidylyltransferase-like NP431_01960 PF00294 pfkB family carbohydrate kinase NP431_01965 PF02321 Outer membrane efflux protein NP431_01970 PF00293 NUDIX domain NP431_01975 PF06853 Protein of unknown function (DUF1249) NP431_01980 PF00149 Calcineurin-like phosphoesterase NP431_01985 PF05728 Uncharacterised protein family (UPF0227) NP431_01990 PF01751 Toprim domain NP431_01990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP431_01990 PF00986 DNA gyrase B subunit, carboxyl terminus NP431_01990 PF00204 DNA gyrase B NP431_01995 PF00521 DNA gyrase/topoisomerase IV, subunit A NP431_01995 PF03989 DNA gyrase C-terminal domain, beta-propeller NP431_02000 PF13180 PDZ domain NP431_02005 PF00595 PDZ domain NP431_02010 PF06295 Protein of unknown function (DUF1043) NP431_02015 PF03969 AFG1-like ATPase NP431_02020 PF00572 Ribosomal protein L13 NP431_02025 PF00380 Ribosomal protein S9/S16 NP431_02030 PF00355 Rieske [2Fe-2S] domain NP431_02030 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal NP431_02035 PF00033 Cytochrome b/b6/petB NP431_02035 PF00032 Cytochrome b(C-terminal)/b6/petD NP431_02040 PF02167 Cytochrome C1 family NP431_02045 PF02798 Glutathione S-transferase, N-terminal domain NP431_02045 PF00043 Glutathione S-transferase, C-terminal domain NP431_02050 PF04386 Stringent starvation protein B NP431_02055 PF04972 BON domain NP431_02060 PF13580 SIS domain NP431_02065 PF02021 Uncharacterised protein family UPF0102 NP431_02070 PF04348 LppC putative lipoprotein NP431_02075 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NP431_02085 PF01795 MraW methylase family NP431_02090 PF04999 Cell division protein FtsL NP431_02095 PF03717 Penicillin-binding Protein dimerisation domain NP431_02095 PF00905 Penicillin binding protein transpeptidase domain NP431_02100 PF08245 Mur ligase middle domain NP431_02100 PF02875 Mur ligase family, glutamate ligase domain NP431_02100 PF01225 Mur ligase family, catalytic domain NP431_02105 PF01225 Mur ligase family, catalytic domain NP431_02105 PF02875 Mur ligase family, glutamate ligase domain NP431_02105 PF08245 Mur ligase middle domain NP431_02110 PF00953 Glycosyl transferase family 4 NP431_02110 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 NP431_02115 PF02875 Mur ligase family, glutamate ligase domain NP431_02115 PF08245 Mur ligase middle domain NP431_02120 PF01098 Cell cycle protein NP431_02125 PF04101 Glycosyltransferase family 28 C-terminal domain NP431_02125 PF03033 Glycosyltransferase family 28 N-terminal domain NP431_02130 PF08245 Mur ligase middle domain NP431_02130 PF02875 Mur ligase family, glutamate ligase domain NP431_02130 PF01225 Mur ligase family, catalytic domain NP431_02135 PF03799 Cell division protein FtsQ NP431_02135 PF08478 POTRA domain, FtsQ-type NP431_02140 PF02491 SHS2 domain inserted in FTSA NP431_02145 PF00091 Tubulin/FtsZ family, GTPase domain NP431_02145 PF12327 FtsZ family, C-terminal domain NP431_02150 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase NP431_02160 PF02810 SEC-C motif NP431_02160 PF07517 SecA DEAD-like domain NP431_02160 PF01043 SecA preprotein cross-linking domain NP431_02160 PF07516 SecA Wing and Scaffold domain NP431_02165 PF00293 NUDIX domain NP431_02170 PF01113 Dihydrodipicolinate reductase, N-terminus NP431_02170 PF05173 Dihydrodipicolinate reductase, C-terminus NP431_02175 PF00117 Glutamine amidotransferase class-I NP431_02175 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NP431_02180 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NP431_02180 PF02142 MGS-like domain NP431_02180 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NP431_02185 PF01925 Sulfite exporter TauE/SafE NP431_02190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_02190 PF03466 LysR substrate binding domain NP431_02195 PF03458 UPF0126 domain NP431_02200 PF01497 Periplasmic binding protein NP431_02210 PF01048 Phosphorylase superfamily NP431_02220 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NP431_02220 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP431_02225 PF04898 Glutamate synthase central domain NP431_02225 PF01645 Conserved region in glutamate synthase NP431_02225 PF01493 GXGXG motif NP431_02225 PF00310 Glutamine amidotransferases class-II NP431_02230 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NP431_02230 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP431_02235 PF01493 GXGXG motif NP431_02235 PF01645 Conserved region in glutamate synthase NP431_02235 PF04898 Glutamate synthase central domain NP431_02235 PF00310 Glutamine amidotransferases class-II NP431_02240 PF16199 Radical_SAM C-terminal domain NP431_02240 PF04055 Radical SAM superfamily NP431_02245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP431_02245 PF18415 Histidine kinase receptor ArcB trans-membrane domain NP431_02245 PF01627 Hpt domain NP431_02245 PF00989 PAS fold NP431_02245 PF00072 Response regulator receiver domain NP431_02245 PF00512 His Kinase A (phospho-acceptor) domain NP431_02255 PF00072 Response regulator receiver domain NP431_02255 PF00486 Transcriptional regulatory protein, C terminal NP431_02265 PF03737 Aldolase/RraA NP431_02275 PF00696 Amino acid kinase family NP431_02275 PF01842 ACT domain NP431_02275 PF13840 ACT domain NP431_02275 PF00742 Homoserine dehydrogenase NP431_02275 PF03447 Homoserine dehydrogenase, NAD binding domain NP431_02280 PF08544 GHMP kinases C terminal NP431_02280 PF00288 GHMP kinases N terminal domain NP431_02285 PF14821 Threonine synthase N terminus NP431_02285 PF00291 Pyridoxal-phosphate dependent enzyme NP431_02290 PF01228 Glycine radical NP431_02295 PF01261 Xylose isomerase-like TIM barrel NP431_02300 PF03167 Uracil DNA glycosylase superfamily NP431_02315 PF01235 Sodium:alanine symporter family NP431_02320 PF03883 Peroxide stress protein YaaA NP431_02325 PF00270 DEAD/DEAH box helicase NP431_02325 PF00271 Helicase conserved C-terminal domain NP431_02330 PF05175 Methyltransferase small domain NP431_02335 PF05525 Branched-chain amino acid transport protein NP431_02340 PF00258 Flavodoxin NP431_02345 PF02899 Phage integrase, N-terminal SAM-like domain NP431_02345 PF00589 Phage integrase family NP431_02350 PF10411 Disulfide bond isomerase protein N-terminus NP431_02350 PF13098 Thioredoxin-like domain NP431_02355 PF02272 DHHA1 domain NP431_02355 PF17768 RecJ OB domain NP431_02355 PF01368 DHH family NP431_02365 PF00152 tRNA synthetases class II (D, K and N) NP431_02365 PF01336 OB-fold nucleic acid binding domain NP431_02370 PF00989 PAS fold NP431_02370 PF00158 Sigma-54 interaction domain NP431_02370 PF02954 Bacterial regulatory protein, Fis family NP431_02380 PF00248 Aldo/keto reductase family NP431_02390 PF02976 DNA mismatch repair enzyme MutH NP431_02395 PF00293 NUDIX domain NP431_02400 PF05524 PEP-utilising enzyme, N-terminal NP431_02400 PF00391 PEP-utilising enzyme, mobile domain NP431_02400 PF02896 PEP-utilising enzyme, TIM barrel domain NP431_02400 PF01590 GAF domain NP431_02405 PF01925 Sulfite exporter TauE/SafE NP431_02410 PF01790 Prolipoprotein diacylglyceryl transferase NP431_02415 PF00303 Thymidylate synthase NP431_02425 PF02690 Na+/Pi-cotransporter NP431_02430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_02430 PF03466 LysR substrate binding domain NP431_02435 PF01022 Bacterial regulatory protein, arsR family NP431_02440 PF01649 Ribosomal protein S20 NP431_02445 PF03023 Lipid II flippase MurJ NP431_02450 PF06574 FAD synthetase NP431_02450 PF01687 Riboflavin kinase NP431_02455 PF00133 tRNA synthetases class I (I, L, M and V) NP431_02455 PF08264 Anticodon-binding domain of tRNA NP431_02455 PF06827 Zinc finger found in FPG and IleRS NP431_02460 PF01252 Signal peptidase (SPase) II NP431_02465 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NP431_02470 PF02401 LytB protein NP431_02475 PF04397 LytTr DNA-binding domain NP431_02475 PF00072 Response regulator receiver domain NP431_02480 PF07694 5TMR of 5TMR-LYT NP431_02480 PF06580 Histidine kinase NP431_02485 PF02554 Carbon starvation protein CstA NP431_02500 PF01380 SIS domain NP431_02505 PF03702 Anhydro-N-acetylmuramic acid kinase NP431_02510 PF00933 Glycosyl hydrolase family 3 N terminal domain NP431_02515 PF00793 DAHP synthetase I family NP431_02520 PF01817 Chorismate mutase type II NP431_02520 PF02153 Prephenate dehydrogenase NP431_02525 PF04225 Opacity-associated protein A LysM-like domain NP431_02525 PF01551 Peptidase family M23 NP431_02530 PF12848 ABC transporter NP431_02530 PF00005 ABC transporter NP431_02535 PF14718 Soluble lytic murein transglycosylase L domain NP431_02535 PF01464 Transglycosylase SLT domain NP431_02540 PF01371 Trp repressor protein NP431_02545 PF01931 Protein of unknown function DUF84 NP431_02550 PF00800 Prephenate dehydratase NP431_02550 PF01817 Chorismate mutase type II NP431_02555 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NP431_02560 PF00497 Bacterial extracellular solute-binding proteins, family 3 NP431_02560 PF01464 Transglycosylase SLT domain NP431_02565 PF13525 Outer membrane lipoprotein NP431_02570 PF00849 RNA pseudouridylate synthase NP431_02570 PF01479 S4 domain NP431_02575 PF02578 Multi-copper polyphenol oxidoreductase laccase NP431_02580 PF02861 Clp amino terminal domain, pathogenicity island component NP431_02580 PF10431 C-terminal, D2-small domain, of ClpB protein NP431_02580 PF07724 AAA domain (Cdc48 subfamily) NP431_02580 PF00004 ATPase family associated with various cellular activities (AAA) NP431_02580 PF17871 AAA lid domain NP431_02595 PF00005 ABC transporter NP431_02605 PF01979 Amidohydrolase family NP431_02650 PF03411 Penicillin-insensitive murein endopeptidase NP431_02660 PF00037 4Fe-4S binding domain NP431_02665 PF01136 Peptidase family U32 NP431_02665 PF16325 Peptidase family U32 C-terminal domain NP431_02670 PF04381 Putative exonuclease, RdgC NP431_02675 PF00072 Response regulator receiver domain NP431_02675 PF00486 Transcriptional regulatory protein, C terminal NP431_02680 PF11808 Phosphate regulon sensor protein PhoR NP431_02680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP431_02680 PF00512 His Kinase A (phospho-acceptor) domain NP431_02680 PF00989 PAS fold NP431_02685 PF12849 PBP superfamily domain NP431_02690 PF02541 Ppx/GppA phosphatase family NP431_02695 PF02503 Polyphosphate kinase middle domain NP431_02695 PF13090 Polyphosphate kinase C-terminal domain 2 NP431_02695 PF17941 Polyphosphate kinase C-terminal domain 1 NP431_02695 PF13089 Polyphosphate kinase N-terminal domain NP431_02700 PF00528 Binding-protein-dependent transport system inner membrane component NP431_02705 PF00528 Binding-protein-dependent transport system inner membrane component NP431_02710 PF00005 ABC transporter NP431_02715 PF01895 PhoU domain NP431_02720 PF03976 Polyphosphate kinase 2 (PPK2) NP431_02725 PF03932 CutC family NP431_02730 PF10417 C-terminal domain of 1-Cys peroxiredoxin NP431_02730 PF00578 AhpC/TSA family NP431_02735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_02735 PF03466 LysR substrate binding domain NP431_02740 PF01274 Malate synthase NP431_02745 PF00463 Isocitrate lyase family NP431_02750 PF00571 CBS domain NP431_02760 PF02547 Queuosine biosynthesis protein NP431_02765 PF01702 Queuine tRNA-ribosyltransferase NP431_02770 PF02699 Preprotein translocase subunit NP431_02775 PF13721 SecD export protein N-terminal TM region NP431_02775 PF02355 Protein export membrane protein NP431_02775 PF07549 SecD/SecF GG Motif NP431_02780 PF07549 SecD/SecF GG Motif NP431_02780 PF02355 Protein export membrane protein NP431_02785 PF00459 Inositol monophosphatase family NP431_02790 PF00588 SpoU rRNA Methylase family NP431_02795 PF02082 Transcriptional regulator NP431_02800 PF00266 Aminotransferase class-V NP431_02805 PF01592 NifU-like N terminal domain NP431_02810 PF01521 Iron-sulphur cluster biosynthesis NP431_02815 PF07743 HSCB C-terminal oligomerisation domain NP431_02815 PF00226 DnaJ domain NP431_02820 PF00012 Hsp70 protein NP431_02825 PF00111 2Fe-2S iron-sulfur cluster binding domain NP431_02830 PF04384 Iron-sulphur cluster assembly NP431_02835 PF12404 Peptidase NP431_02835 PF00883 Cytosol aminopeptidase family, catalytic domain NP431_02840 PF00334 Nucleoside diphosphate kinase NP431_02845 PF04055 Radical SAM superfamily NP431_02850 PF13464 Domain of unknown function (DUF4115) NP431_02855 PF04551 GcpE protein NP431_02860 PF03129 Anticodon binding domain NP431_02860 PF13393 Histidyl-tRNA synthetase NP431_02865 PF09976 Tetratricopeptide repeat-like domain NP431_02870 PF13360 PQQ-like domain NP431_02875 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NP431_02875 PF01926 50S ribosome-binding GTPase NP431_02890 PF02601 Exonuclease VII, large subunit NP431_02890 PF13742 OB-fold nucleic acid binding domain NP431_02895 PF00571 CBS domain NP431_02895 PF00478 IMP dehydrogenase / GMP reductase domain NP431_02900 PF00117 Glutamine amidotransferase class-I NP431_02900 PF02540 NAD synthase NP431_02900 PF00958 GMP synthase C terminal domain NP431_02915 PF01184 GPR1/FUN34/yaaH family NP431_02925 PF07690 Major Facilitator Superfamily NP431_02930 PF01546 Peptidase family M20/M25/M40 NP431_02930 PF07687 Peptidase dimerisation domain NP431_02935 PF03466 LysR substrate binding domain NP431_02935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_02940 PF01235 Sodium:alanine symporter family NP431_02945 PF01266 FAD dependent oxidoreductase NP431_02955 PF01053 Cys/Met metabolism PLP-dependent enzyme NP431_02960 PF00202 Aminotransferase class-III NP431_02980 PF00583 Acetyltransferase (GNAT) family NP431_02980 PF00795 Carbon-nitrogen hydrolase NP431_02985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_02985 PF03466 LysR substrate binding domain NP431_02990 PF00596 Class II Aldolase and Adducin N-terminal domain NP431_02995 PF06134 L-rhamnose isomerase (RhaA) NP431_03000 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NP431_03005 PF05336 L-rhamnose mutarotase NP431_03015 PF02311 AraC-like ligand binding domain NP431_03015 PF12833 Helix-turn-helix domain NP431_03020 PF05922 Peptidase inhibitor I9 NP431_03020 PF00082 Subtilase family NP431_03020 PF05922 Peptidase inhibitor I9 NP431_03020 PF00082 Subtilase family NP431_03035 PF05384 Sensor protein DegS NP431_03035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP431_03035 PF07730 Histidine kinase NP431_03040 PF00072 Response regulator receiver domain NP431_03040 PF00196 Bacterial regulatory proteins, luxR family NP431_03050 PF01668 SmpB protein NP431_03055 PF03364 Polyketide cyclase / dehydrase and lipid transport NP431_03060 PF03658 RnfH family Ubiquitin NP431_03065 PF04355 SmpA / OmlA family NP431_03070 PF02463 RecF/RecN/SMC N terminal domain NP431_03075 PF01513 ATP-NAD kinase NP431_03080 PF01025 GrpE NP431_03085 PF00375 Sodium:dicarboxylate symporter family NP431_03090 PF00012 Hsp70 protein NP431_03095 PF00226 DnaJ domain NP431_03095 PF01556 DnaJ C terminal domain NP431_03095 PF00684 DnaJ central domain NP431_03100 PF07963 Prokaryotic N-terminal methylation motif NP431_03100 PF00114 Pilin (bacterial filament) NP431_03125 PF03806 AbgT putative transporter family NP431_03130 PF14437 MafB19-like deaminase NP431_03140 PF00497 Bacterial extracellular solute-binding proteins, family 3 NP431_03140 PF01464 Transglycosylase SLT domain NP431_03145 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal NP431_03145 PF02769 AIR synthase related protein, C-terminal domain NP431_03145 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain NP431_03180 PF01546 Peptidase family M20/M25/M40 NP431_03180 PF07687 Peptidase dimerisation domain NP431_03185 PF00860 Permease family NP431_03190 PF00156 Phosphoribosyl transferase domain NP431_03195 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) NP431_03200 PF07417 Sigma factor-binding transcriptional regulator Crl NP431_03205 PF01472 PUA domain NP431_03205 PF00696 Amino acid kinase family NP431_03210 PF00171 Aldehyde dehydrogenase family NP431_03215 PF03477 ATP cone domain NP431_03220 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NP431_03220 PF01872 RibD C-terminal domain NP431_03225 PF00677 Lumazine binding domain NP431_03230 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NP431_03230 PF00925 GTP cyclohydrolase II NP431_03235 PF00885 6,7-dimethyl-8-ribityllumazine synthase NP431_03240 PF01029 NusB family NP431_03245 PF00586 AIR synthase related protein, N-terminal domain NP431_03245 PF02769 AIR synthase related protein, C-terminal domain NP431_03250 PF04608 Phosphatidylglycerophosphatase A NP431_03255 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NP431_03255 PF02779 Transketolase, pyrimidine binding domain NP431_03255 PF02780 Transketolase, C-terminal domain NP431_03260 PF00348 Polyprenyl synthetase NP431_03265 PF02609 Exonuclease VII small subunit NP431_03270 PF01618 MotA/TolQ/ExbB proton channel family NP431_03275 PF00691 OmpA family NP431_03280 PF02568 Thiamine biosynthesis protein (ThiI) NP431_03280 PF02926 THUMP domain NP431_03285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_03285 PF03466 LysR substrate binding domain NP431_03295 PF04241 Protein of unknown function (DUF423) NP431_03300 PF18125 RlmM ferredoxin-like domain NP431_03300 PF01728 FtsJ-like methyltransferase NP431_03305 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NP431_03305 PF01367 5'-3' exonuclease, C-terminal SAM fold NP431_03310 PF03641 Possible lysine decarboxylase NP431_03310 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases NP431_03310 PF11892 Domain of unknown function (DUF3412) NP431_03315 PF00990 Diguanylate cyclase, GGDEF domain NP431_03325 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term NP431_03325 PF14489 QueF-like protein NP431_03330 PF07348 Syd protein (SUKH-2) NP431_03335 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) NP431_03340 PF03180 NLPA lipoprotein NP431_03345 PF00528 Binding-protein-dependent transport system inner membrane component NP431_03350 PF09383 NIL domain NP431_03350 PF00005 ABC transporter NP431_03360 PF00356 Bacterial regulatory proteins, lacI family NP431_03365 PF00367 phosphotransferase system, EIIB NP431_03365 PF02378 Phosphotransferase system, EIIC NP431_03370 PF00128 Alpha amylase, catalytic domain NP431_03370 PF16657 Maltogenic Amylase, C-terminal domain NP431_03380 PF00464 Serine hydroxymethyltransferase NP431_03385 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family NP431_03385 PF04055 Radical SAM superfamily NP431_03390 PF03099 Biotin/lipoate A/B protein ligase family NP431_03395 PF04359 Protein of unknown function (DUF493) NP431_03400 PF07943 Penicillin-binding protein 5, C-terminal domain NP431_03400 PF00768 D-alanyl-D-alanine carboxypeptidase NP431_03405 PF05036 Sporulation related domain NP431_03405 PF03330 Lytic transglycolase NP431_03410 PF01098 Cell cycle protein NP431_03415 PF03717 Penicillin-binding Protein dimerisation domain NP431_03415 PF00905 Penicillin binding protein transpeptidase domain NP431_03420 PF02590 Predicted SPOUT methyltransferase NP431_03430 PF06144 DNA polymerase III, delta subunit NP431_03430 PF14840 Processivity clamp loader gamma complex DNA pol III C-term NP431_03435 PF04390 Lipopolysaccharide-assembly NP431_03440 PF13603 Leucyl-tRNA synthetase, Domain 2 NP431_03440 PF00133 tRNA synthetases class I (I, L, M and V) NP431_03440 PF08264 Anticodon-binding domain of tRNA NP431_03445 PF07295 Zinc-ribbon containing domain NP431_03450 PF00795 Carbon-nitrogen hydrolase NP431_03455 PF00571 CBS domain NP431_03455 PF03471 Transporter associated domain NP431_03460 PF02130 Uncharacterized protein family UPF0054 NP431_03465 PF02562 PhoH-like protein NP431_03470 PF04055 Radical SAM superfamily NP431_03470 PF00919 Uncharacterized protein family UPF0004 NP431_03470 PF01938 TRAM domain NP431_03475 PF01494 FAD binding domain NP431_03585 PF01926 50S ribosome-binding GTPase NP431_03585 PF06071 Protein of unknown function (DUF933) NP431_03590 PF01195 Peptidyl-tRNA hydrolase NP431_03595 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NP431_03595 PF14572 Phosphoribosyl synthetase-associated domain NP431_03600 PF00288 GHMP kinases N terminal domain NP431_03600 PF08544 GHMP kinases C terminal NP431_03605 PF03550 Outer membrane lipoprotein LolB NP431_03610 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NP431_03610 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain NP431_03610 PF01488 Shikimate / quinate 5-dehydrogenase NP431_03615 PF03462 PCRF domain NP431_03615 PF00472 RF-1 domain NP431_03620 PF13847 Methyltransferase domain NP431_03620 PF17827 PrmC N-terminal domain NP431_03625 PF04247 Invasion gene expression up-regulator, SirB NP431_03630 PF13369 Transglutaminase-like superfamily NP431_03635 PF00793 DAHP synthetase I family NP431_03640 PF00149 Calcineurin-like phosphoesterase NP431_03640 PF02872 5'-nucleotidase, C-terminal domain NP431_03645 PF04073 Aminoacyl-tRNA editing domain NP431_03650 PF01479 S4 domain NP431_03650 PF00849 RNA pseudouridylate synthase NP431_03655 PF01713 Smr domain NP431_03685 PF00403 Heavy-metal-associated domain NP431_03690 PF00749 tRNA synthetases class I (E and Q), catalytic domain NP431_03695 PF00691 OmpA family NP431_03695 PF01389 OmpA-like transmembrane domain NP431_03740 PF01584 CheW-like domain NP431_03740 PF00072 Response regulator receiver domain NP431_03745 PF01739 CheR methyltransferase, SAM binding domain NP431_03745 PF03705 CheR methyltransferase, all-alpha domain NP431_03750 PF00460 Flagella basal body rod protein NP431_03755 PF00460 Flagella basal body rod protein NP431_03755 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NP431_03760 PF13860 FlgD Ig-like domain NP431_03760 PF03963 Flagellar hook capping protein - N-terminal region NP431_03760 PF13861 FlgD Tudor-like domain NP431_03765 PF07559 Flagellar basal body protein FlaE NP431_03765 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NP431_03765 PF00460 Flagella basal body rod protein NP431_03770 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NP431_03770 PF00460 Flagella basal body rod protein NP431_03775 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NP431_03775 PF00460 Flagella basal body rod protein NP431_03780 PF02107 Flagellar L-ring protein NP431_03785 PF02119 Flagellar P-ring protein NP431_03790 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase NP431_03790 PF10135 Rod binding protein NP431_03795 PF07196 Flagellin hook IN motif NP431_03795 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NP431_03800 PF00669 Bacterial flagellin N-terminal helical region NP431_03805 PF00700 Bacterial flagellin C-terminal helical region NP431_03805 PF07196 Flagellin hook IN motif NP431_03805 PF00669 Bacterial flagellin N-terminal helical region NP431_03810 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NP431_03815 PF05524 PEP-utilising enzyme, N-terminal NP431_03815 PF00391 PEP-utilising enzyme, mobile domain NP431_03815 PF02896 PEP-utilising enzyme, TIM barrel domain NP431_03820 PF00381 PTS HPr component phosphorylation site NP431_03825 PF00291 Pyridoxal-phosphate dependent enzyme NP431_03835 PF04354 ZipA, C-terminal FtsZ-binding domain NP431_03840 PF00533 BRCA1 C Terminus (BRCT) domain NP431_03840 PF03120 NAD-dependent DNA ligase OB-fold domain NP431_03840 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NP431_03840 PF12826 Helix-hairpin-helix motif NP431_03840 PF01653 NAD-dependent DNA ligase adenylation domain NP431_03845 PF03573 outer membrane porin, OprD family NP431_03865 PF16200 C-terminal region of band_7 NP431_03865 PF01145 SPFH domain / Band 7 family NP431_03870 PF00085 Thioredoxin NP431_03875 PF00106 short chain dehydrogenase NP431_03880 PF08338 Domain of unknown function (DUF1731) NP431_03880 PF01370 NAD dependent epimerase/dehydratase family NP431_03885 PF07556 Protein of unknown function (DUF1538) NP431_03890 PF07556 Protein of unknown function (DUF1538) NP431_03910 PF12850 Calcineurin-like phosphoesterase superfamily domain NP431_03925 PF17323 Trans-membrane regulatory protein ToxS NP431_03930 PF00486 Transcriptional regulatory protein, C terminal NP431_03935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP431_03935 PF00183 Hsp90 protein NP431_03940 PF05191 Adenylate kinase, active site lid NP431_03945 PF00762 Ferrochelatase NP431_03950 PF00854 POT family NP431_03955 PF02357 Transcription termination factor nusG NP431_03960 PF00733 Asparagine synthase NP431_03960 PF13537 Glutamine amidotransferase domain NP431_03965 PF02254 TrkA-N domain NP431_03965 PF00999 Sodium/hydrogen exchanger family NP431_03970 PF00480 ROK family NP431_03970 PF01047 MarR family NP431_03975 PF01979 Amidohydrolase family NP431_03980 PF02378 Phosphotransferase system, EIIC NP431_03980 PF00367 phosphotransferase system, EIIB NP431_03980 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NP431_03985 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain NP431_03985 PF00749 tRNA synthetases class I (E and Q), catalytic domain NP431_03990 PF01475 Ferric uptake regulator family NP431_03995 PF02774 Semialdehyde dehydrogenase, dimerisation domain NP431_03995 PF01118 Semialdehyde dehydrogenase, NAD binding domain NP431_04000 PF00258 Flavodoxin NP431_04010 PF12697 Alpha/beta hydrolase family NP431_04015 PF03925 SeqA protein C-terminal domain NP431_04015 PF17206 SeqA protein N-terminal domain NP431_04020 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NP431_04020 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NP431_04020 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NP431_04020 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NP431_04030 PF01784 NIF3 (NGG1p interacting factor 3) NP431_04035 PF00285 Citrate synthase, C-terminal domain NP431_04040 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NP431_04045 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NP431_04050 PF00890 FAD binding domain NP431_04050 PF02910 Fumarate reductase flavoprotein C-term NP431_04055 PF13085 2Fe-2S iron-sulfur cluster binding domain NP431_04060 PF16078 2-oxoglutarate dehydrogenase N-terminus NP431_04060 PF00676 Dehydrogenase E1 component NP431_04060 PF16870 2-oxoglutarate dehydrogenase C-terminal NP431_04060 PF02779 Transketolase, pyrimidine binding domain NP431_04065 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NP431_04065 PF00364 Biotin-requiring enzyme NP431_04065 PF02817 e3 binding domain NP431_04070 PF08442 ATP-grasp domain NP431_04070 PF00549 CoA-ligase NP431_04075 PF00549 CoA-ligase NP431_04075 PF02629 CoA binding domain NP431_04080 PF00950 ABC 3 transport family NP431_04085 PF00005 ABC transporter NP431_04090 PF01297 Zinc-uptake complex component A periplasmic NP431_04095 PF02311 AraC-like ligand binding domain NP431_04095 PF12833 Helix-turn-helix domain NP431_04100 PF04023 FeoA domain NP431_04105 PF07664 Ferrous iron transport protein B C terminus NP431_04105 PF17910 FeoB cytosolic helical domain NP431_04105 PF02421 Ferrous iron transport protein B NP431_04105 PF07670 Nucleoside recognition NP431_04120 PF05746 DALR anticodon binding domain NP431_04120 PF03485 Arginyl tRNA synthetase N terminal domain NP431_04120 PF00750 tRNA synthetases class I (R) NP431_04125 PF06185 YecM protein NP431_04135 PF00089 Trypsin NP431_04140 PF01842 ACT domain NP431_04140 PF00551 Formyl transferase NP431_04145 PF13307 Helicase C-terminal domain NP431_04145 PF04851 Type III restriction enzyme, res subunit NP431_04150 PF00814 Glycoprotease family NP431_04165 PF00561 alpha/beta hydrolase fold NP431_04170 PF00501 AMP-binding enzyme NP431_04170 PF13193 AMP-binding enzyme C-terminal domain NP431_04175 PF00570 HRDC domain NP431_04175 PF01612 3'-5' exonuclease NP431_04180 PF03776 Septum formation topological specificity factor MinE NP431_04185 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NP431_04190 PF03775 Septum formation inhibitor MinC, C-terminal domain NP431_04190 PF05209 Septum formation inhibitor MinC, N-terminal domain NP431_04195 PF05166 YcgL domain NP431_04200 PF13406 Transglycosylase SLT domain NP431_04205 PF03466 LysR substrate binding domain NP431_04205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_04210 PF07662 Na+ dependent nucleoside transporter C-terminus NP431_04210 PF07670 Nucleoside recognition NP431_04210 PF01773 Na+ dependent nucleoside transporter N-terminus NP431_04215 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NP431_04215 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NP431_04235 PF00425 chorismate binding enzyme NP431_04240 PF13193 AMP-binding enzyme C-terminal domain NP431_04240 PF00501 AMP-binding enzyme NP431_04245 PF00857 Isochorismatase family NP431_04245 PF00550 Phosphopantetheine attachment site NP431_04250 PF00550 Phosphopantetheine attachment site NP431_04250 PF00975 Thioesterase domain NP431_04250 PF00501 AMP-binding enzyme NP431_04250 PF13193 AMP-binding enzyme C-terminal domain NP431_04250 PF00668 Condensation domain NP431_04250 PF00550 Phosphopantetheine attachment site NP431_04250 PF00975 Thioesterase domain NP431_04250 PF13193 AMP-binding enzyme C-terminal domain NP431_04250 PF00668 Condensation domain NP431_04250 PF00501 AMP-binding enzyme NP431_04265 PF00593 TonB dependent receptor NP431_04265 PF07715 TonB-dependent Receptor Plug Domain NP431_04270 PF03471 Transporter associated domain NP431_04270 PF00571 CBS domain NP431_04270 PF01595 Cyclin M transmembrane N-terminal domain NP431_04275 PF00271 Helicase conserved C-terminal domain NP431_04275 PF00270 DEAD/DEAH box helicase NP431_04280 PF02254 TrkA-N domain NP431_04280 PF02080 TrkA-C domain NP431_04285 PF02386 Cation transport protein NP431_04295 PF02696 Uncharacterized ACR, YdiU/UPF0061 family NP431_04300 PF00072 Response regulator receiver domain NP431_04300 PF00486 Transcriptional regulatory protein, C terminal NP431_04305 PF00512 His Kinase A (phospho-acceptor) domain NP431_04305 PF00672 HAMP domain NP431_04305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP431_04310 PF01547 Bacterial extracellular solute-binding protein NP431_04315 PF00528 Binding-protein-dependent transport system inner membrane component NP431_04320 PF00528 Binding-protein-dependent transport system inner membrane component NP431_04325 PF03459 TOBE domain NP431_04325 PF00005 ABC transporter NP431_04325 PF17912 MalK OB fold domain NP431_04330 PF03480 Bacterial extracellular solute-binding protein, family 7 NP431_04335 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component NP431_04340 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NP431_04350 PF00072 Response regulator receiver domain NP431_04350 PF02954 Bacterial regulatory protein, Fis family NP431_04350 PF00158 Sigma-54 interaction domain NP431_04355 PF02743 Cache domain NP431_04355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP431_04355 PF00512 His Kinase A (phospho-acceptor) domain NP431_04360 PF05698 Bacterial trigger factor protein (TF) C-terminus NP431_04360 PF05697 Bacterial trigger factor protein (TF) NP431_04360 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NP431_04365 PF00574 Clp protease NP431_04370 PF07724 AAA domain (Cdc48 subfamily) NP431_04370 PF10431 C-terminal, D2-small domain, of ClpB protein NP431_04370 PF06689 ClpX C4-type zinc finger NP431_04375 PF00004 ATPase family associated with various cellular activities (AAA) NP431_04375 PF05362 Lon protease (S16) C-terminal proteolytic domain NP431_04375 PF02190 ATP-dependent protease La (LON) substrate-binding domain NP431_04380 PF00216 Bacterial DNA-binding protein NP431_04385 PF13145 PPIC-type PPIASE domain NP431_04405 PF01966 HD domain NP431_04405 PF13286 Phosphohydrolase-associated domain NP431_04415 PF00155 Aminotransferase class I and II NP431_04420 PF00425 chorismate binding enzyme NP431_04425 PF16582 Middle domain of thiamine pyrophosphate NP431_04425 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NP431_04425 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NP431_04430 PF12697 Alpha/beta hydrolase family NP431_04435 PF00378 Enoyl-CoA hydratase/isomerase NP431_04440 PF13378 Enolase C-terminal domain-like NP431_04445 PF00501 AMP-binding enzyme NP431_04445 PF13193 AMP-binding enzyme C-terminal domain NP431_04455 PF03601 Conserved hypothetical protein 698 NP431_04460 PF07690 Major Facilitator Superfamily NP431_04500 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NP431_04500 PF00529 HlyD membrane-fusion protein of T1SS NP431_04505 PF00873 AcrB/AcrD/AcrF family NP431_04515 PF00291 Pyridoxal-phosphate dependent enzyme NP431_04520 PF13404 AsnC-type helix-turn-helix domain NP431_04520 PF01037 Lrp/AsnC ligand binding domain NP431_04530 PF09619 Type III secretion system lipoprotein chaperone (YscW) NP431_04535 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NP431_04585 PF13676 TIR domain NP431_04610 PF07693 KAP family P-loop domain NP431_04645 PF03466 LysR substrate binding domain NP431_04645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_04650 PF00232 Glycosyl hydrolase family 1 NP431_04655 PF01266 FAD dependent oxidoreductase NP431_04660 PF00120 Glutamine synthetase, catalytic domain NP431_04665 PF00120 Glutamine synthetase, catalytic domain NP431_04670 PF00202 Aminotransferase class-III NP431_04675 PF13416 Bacterial extracellular solute-binding protein NP431_04680 PF00005 ABC transporter NP431_04680 PF08402 TOBE domain NP431_04685 PF00528 Binding-protein-dependent transport system inner membrane component NP431_04690 PF00528 Binding-protein-dependent transport system inner membrane component NP431_04700 PF00171 Aldehyde dehydrogenase family NP431_04705 PF00117 Glutamine amidotransferase class-I NP431_04705 PF00958 GMP synthase C terminal domain NP431_04710 PF00588 SpoU rRNA Methylase family NP431_04710 PF08032 RNA 2'-O ribose methyltransferase substrate binding NP431_04715 PF11953 Domain of unknown function (DUF3470) NP431_04715 PF00037 4Fe-4S binding domain NP431_04725 PF00571 CBS domain NP431_04725 PF00478 IMP dehydrogenase / GMP reductase domain NP431_04730 PF00403 Heavy-metal-associated domain NP431_04735 PF01048 Phosphorylase superfamily NP431_04745 PF00672 HAMP domain NP431_04745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP431_04750 PF01230 HIT domain NP431_04765 PF13036 Peptidoglycan-synthase activator LpoB NP431_04765 PF08139 Prokaryotic membrane lipoprotein lipid attachment site NP431_04775 PF05728 Uncharacterised protein family (UPF0227) NP431_04780 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP431_04795 PF00270 DEAD/DEAH box helicase NP431_04795 PF00271 Helicase conserved C-terminal domain NP431_04795 PF03461 TRCF domain NP431_04795 PF17757 UvrB interaction domain NP431_04795 PF02559 CarD-like/TRCF domain NP431_04805 PF02687 FtsX-like permease family NP431_04805 PF12704 MacB-like periplasmic core domain NP431_04810 PF00005 ABC transporter NP431_04815 PF12704 MacB-like periplasmic core domain NP431_04815 PF02687 FtsX-like permease family NP431_04825 PF00753 Metallo-beta-lactamase superfamily NP431_04825 PF03772 Competence protein NP431_04825 PF13567 Domain of unknown function (DUF4131) NP431_04830 PF00005 ABC transporter NP431_04830 PF00664 ABC transporter transmembrane region NP431_04835 PF02606 Tetraacyldisaccharide-1-P 4'-kinase NP431_04840 PF03966 Trm112p-like protein NP431_04845 PF02348 Cytidylyltransferase NP431_04850 PF04293 SpoVR like protein NP431_04855 PF04285 Protein of unknown function (DUF444) NP431_04860 PF08298 PrkA AAA domain NP431_04860 PF06798 PrkA serine protein kinase C-terminal domain NP431_04865 PF03887 YfbU domain NP431_04875 PF04055 Radical SAM superfamily NP431_04885 PF01228 Glycine radical NP431_04885 PF02901 Pyruvate formate lyase-like NP431_04900 PF00005 ABC transporter NP431_04905 PF00497 Bacterial extracellular solute-binding proteins, family 3 NP431_04910 PF00528 Binding-protein-dependent transport system inner membrane component NP431_04915 PF00528 Binding-protein-dependent transport system inner membrane component NP431_04920 PF03372 Endonuclease/Exonuclease/phosphatase family NP431_04925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_04925 PF03466 LysR substrate binding domain NP431_04930 PF03788 LrgA family NP431_04935 PF04172 LrgB-like family NP431_04940 PF10689 Protein of unknown function (DUF2496) NP431_04945 PF07445 Primosomal replication protein priC NP431_04950 PF01925 Sulfite exporter TauE/SafE NP431_04955 PF06733 DEAD_2 NP431_04955 PF13307 Helicase C-terminal domain NP431_04965 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) NP431_04970 PF00849 RNA pseudouridylate synthase NP431_04975 PF03971 Monomeric isocitrate dehydrogenase NP431_04980 PF00313 'Cold-shock' DNA-binding domain NP431_04985 PF02617 ATP-dependent Clp protease adaptor protein ClpS NP431_04990 PF07724 AAA domain (Cdc48 subfamily) NP431_04990 PF10431 C-terminal, D2-small domain, of ClpB protein NP431_04990 PF00004 ATPase family associated with various cellular activities (AAA) NP431_04990 PF17871 AAA lid domain NP431_04990 PF02861 Clp amino terminal domain, pathogenicity island component NP431_04995 PF01176 Translation initiation factor 1A / IF-1 NP431_05000 PF04377 Arginine-tRNA-protein transferase, C terminus NP431_05000 PF04376 Arginine-tRNA-protein transferase, N terminus NP431_05005 PF03588 Leucyl/phenylalanyl-tRNA protein transferase NP431_05015 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NP431_05020 PF10692 Protein of unknown function (DUF2498) NP431_05025 PF08272 Topoisomerase I zinc-ribbon-like NP431_05025 PF01131 DNA topoisomerase NP431_05025 PF01751 Toprim domain NP431_05025 PF01396 Topoisomerase DNA binding C4 zinc finger NP431_05030 PF00483 Nucleotidyl transferase NP431_05035 PF08323 Starch synthase catalytic domain NP431_05035 PF00534 Glycosyl transferases group 1 NP431_05055 PF04994 TfoX C-terminal domain NP431_05055 PF04993 TfoX N-terminal domain NP431_05060 PF00356 Bacterial regulatory proteins, lacI family NP431_05065 PF02613 Nitrate reductase delta subunit NP431_05070 PF00486 Transcriptional regulatory protein, C terminal NP431_05070 PF00072 Response regulator receiver domain NP431_05075 PF02698 DUF218 domain NP431_05080 PF13847 Methyltransferase domain NP431_05085 PF03882 MukF winged-helix domain NP431_05085 PF17193 MukF C-terminal domain NP431_05085 PF17192 MukF middle domain NP431_05090 PF04288 MukE-like family NP431_05095 PF16330 MukB hinge domain NP431_05095 PF04310 MukB N-terminal NP431_05100 PF12833 Helix-turn-helix domain NP431_05100 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term NP431_05105 PF00171 Aldehyde dehydrogenase family NP431_05110 PF05199 GMC oxidoreductase NP431_05110 PF00732 GMC oxidoreductase NP431_05120 PF08443 RimK-like ATP-grasp domain NP431_05120 PF18030 RimK PreATP-grasp domain NP431_05130 PF08443 RimK-like ATP-grasp domain NP431_05130 PF18030 RimK PreATP-grasp domain NP431_05135 PF08003 Protein of unknown function (DUF1698) NP431_05140 PF13649 Methyltransferase domain NP431_05145 PF01904 Protein of unknown function DUF72 NP431_05150 PF02938 GAD domain NP431_05150 PF00152 tRNA synthetases class II (D, K and N) NP431_05150 PF01336 OB-fold nucleic acid binding domain NP431_05155 PF02075 Crossover junction endodeoxyribonuclease RuvC NP431_05160 PF01330 RuvA N terminal domain NP431_05160 PF07499 RuvA, C-terminal domain NP431_05165 PF17864 RuvB AAA lid domain NP431_05165 PF05491 RuvB C-terminal winged helix domain NP431_05165 PF05496 Holliday junction DNA helicase RuvB P-loop domain NP431_05170 PF01654 Cytochrome bd terminal oxidase subunit I NP431_05175 PF02322 Cytochrome bd terminal oxidase subunit II NP431_05180 PF08173 Membrane bound YbgT-like protein NP431_05190 PF03061 Thioesterase superfamily NP431_05195 PF01618 MotA/TolQ/ExbB proton channel family NP431_05200 PF02472 Biopolymer transport protein ExbD/TolR NP431_05210 PF04052 TolB amino-terminal domain NP431_05210 PF07676 WD40-like Beta Propeller Repeat NP431_05215 PF00691 OmpA family NP431_05220 PF16331 TolA binding protein trimerisation NP431_05220 PF13174 Tetratricopeptide repeat NP431_05225 PF02445 Quinolinate synthetase A protein NP431_05235 PF03994 Domain of Unknown Function (DUF350) NP431_05245 PF03738 Glutathionylspermidine synthase preATP-grasp NP431_05260 PF03150 Di-haem cytochrome c peroxidase NP431_05280 PF00072 Response regulator receiver domain NP431_05280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP431_05280 PF00512 His Kinase A (phospho-acceptor) domain NP431_05280 PF09308 LuxQ, periplasmic NP431_05285 PF06610 L-alanine exporter NP431_05300 PF13391 HNH endonuclease NP431_05305 PF00082 Subtilase family NP431_05310 PF03466 LysR substrate binding domain NP431_05310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_05315 PF16957 Malonate decarboxylase, alpha subunit, transporter NP431_05320 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase NP431_05325 PF06857 Malonate decarboxylase delta subunit (MdcD) NP431_05335 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG NP431_05340 PF00698 Acyl transferase domain NP431_05345 PF07883 Cupin domain NP431_05345 PF01381 Helix-turn-helix NP431_05350 PF03594 Benzoate membrane transport protein NP431_05355 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NP431_05355 PF00529 HlyD membrane-fusion protein of T1SS NP431_05360 PF00873 AcrB/AcrD/AcrF family NP431_05375 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) NP431_05385 PF03466 LysR substrate binding domain NP431_05385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_05395 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NP431_05395 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NP431_05400 PF01037 Lrp/AsnC ligand binding domain NP431_05405 PF13491 4TM region of DNA translocase FtsK/SpoIIIE NP431_05405 PF17854 FtsK alpha domain NP431_05405 PF09397 Ftsk gamma domain NP431_05405 PF01580 FtsK/SpoIIIE family NP431_05410 PF03548 Outer membrane lipoprotein carrier protein LolA NP431_05415 PF16193 AAA C-terminal domain NP431_05415 PF00004 ATPase family associated with various cellular activities (AAA) NP431_05415 PF12002 MgsA AAA+ ATPase C terminal NP431_05420 PF02403 Seryl-tRNA synthetase N-terminal domain NP431_05420 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NP431_05425 PF00202 Aminotransferase class-III NP431_05430 PF04055 Radical SAM superfamily NP431_05430 PF06968 Biotin and Thiamin Synthesis associated domain NP431_05435 PF00155 Aminotransferase class I and II NP431_05440 PF08241 Methyltransferase domain NP431_05455 PF01435 Peptidase family M48 NP431_05465 PF00106 short chain dehydrogenase NP431_05500 PF08328 Adenylosuccinate lyase C-terminal NP431_05500 PF00206 Lyase NP431_05505 PF04356 Protein of unknown function (DUF489) NP431_05520 PF00294 pfkB family carbohydrate kinase NP431_05525 PF00816 H-NS histone family NP431_05530 PF03553 Na+/H+ antiporter family NP431_05540 PF02954 Bacterial regulatory protein, Fis family NP431_05540 PF00072 Response regulator receiver domain NP431_05540 PF00158 Sigma-54 interaction domain NP431_05545 PF08029 HisG, C-terminal domain NP431_05545 PF01634 ATP phosphoribosyltransferase NP431_05550 PF00815 Histidinol dehydrogenase NP431_05555 PF00155 Aminotransferase class I and II NP431_05560 PF00475 Imidazoleglycerol-phosphate dehydratase NP431_05560 PF08645 Polynucleotide kinase 3 phosphatase NP431_05565 PF00117 Glutamine amidotransferase class-I NP431_05570 PF00977 Histidine biosynthesis protein NP431_05575 PF00977 Histidine biosynthesis protein NP431_05580 PF01502 Phosphoribosyl-AMP cyclohydrolase NP431_05580 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase NP431_05585 PF02810 SEC-C motif NP431_05590 PF00563 EAL domain NP431_05590 PF08668 HDOD domain NP431_05595 PF00149 Calcineurin-like phosphoesterase NP431_05600 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NP431_05605 PF09190 DALR domain NP431_05605 PF01406 tRNA synthetases class I (C) catalytic domain NP431_05610 PF00265 Thymidine kinase NP431_05615 PF02698 DUF218 domain NP431_05630 PF01226 Formate/nitrite transporter NP431_05640 PF03649 Uncharacterised protein family (UPF0014) NP431_05645 PF06796 Periplasmic nitrate reductase protein NapE NP431_05650 PF03264 NapC/NirT cytochrome c family, N-terminal region NP431_05655 PF01568 Molydopterin dinucleotide binding domain NP431_05655 PF00384 Molybdopterin oxidoreductase NP431_05655 PF18364 Molybdopterin oxidoreductase N-terminal domain NP431_05660 PF16874 Glycosyl hydrolase family 36 C-terminal domain NP431_05660 PF16875 Glycosyl hydrolase family 36 N-terminal domain NP431_05670 PF01368 DHH family NP431_05670 PF02833 DHHA2 domain NP431_05680 PF00005 ABC transporter NP431_05685 PF00005 ABC transporter NP431_05685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NP431_05690 PF00528 Binding-protein-dependent transport system inner membrane component NP431_05690 PF12911 N-terminal TM domain of oligopeptide transport permease C NP431_05695 PF00528 Binding-protein-dependent transport system inner membrane component NP431_05700 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NP431_05705 PF02954 Bacterial regulatory protein, Fis family NP431_05705 PF00158 Sigma-54 interaction domain NP431_05710 PF04012 PspA/IM30 family NP431_05715 PF06667 Phage shock protein B NP431_05720 PF04024 PspC domain NP431_05725 PF13533 Biotin-lipoyl like NP431_05730 PF13533 Biotin-lipoyl like NP431_05735 PF00873 AcrB/AcrD/AcrF family NP431_05740 PF03352 Methyladenine glycosylase NP431_05745 PF01053 Cys/Met metabolism PLP-dependent enzyme NP431_05750 PF13396 Phospholipase_D-nuclease N-terminal NP431_05750 PF13091 PLD-like domain NP431_05755 PF00209 Sodium:neurotransmitter symporter family NP431_05760 PF00849 RNA pseudouridylate synthase NP431_05770 PF00970 Oxidoreductase FAD-binding domain NP431_05770 PF00111 2Fe-2S iron-sulfur cluster binding domain NP431_05770 PF00175 Oxidoreductase NAD-binding domain NP431_05775 PF03063 Prismane/CO dehydrogenase family NP431_05780 PF01590 GAF domain NP431_05780 PF00158 Sigma-54 interaction domain NP431_05790 PF01066 CDP-alcohol phosphatidyltransferase NP431_05795 PF00005 ABC transporter NP431_05800 PF00528 Binding-protein-dependent transport system inner membrane component NP431_05805 PF13416 Bacterial extracellular solute-binding protein NP431_05815 PF06945 Protein of unknown function (DUF1289) NP431_05825 PF00149 Calcineurin-like phosphoesterase NP431_05825 PF02872 5'-nucleotidase, C-terminal domain NP431_05830 PF01386 Ribosomal L25p family NP431_05835 PF13756 Stimulus-sensing domain NP431_05835 PF13755 Sensor N-terminal transmembrane domain NP431_05835 PF00512 His Kinase A (phospho-acceptor) domain NP431_05835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP431_05835 PF00672 HAMP domain NP431_05840 PF00486 Transcriptional regulatory protein, C terminal NP431_05840 PF00072 Response regulator receiver domain NP431_05850 PF00271 Helicase conserved C-terminal domain NP431_05850 PF04851 Type III restriction enzyme, res subunit NP431_05855 PF00849 RNA pseudouridylate synthase NP431_05855 PF01479 S4 domain NP431_05860 PF07690 Major Facilitator Superfamily NP431_05870 PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB NP431_05875 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) NP431_05890 PF03264 NapC/NirT cytochrome c family, N-terminal region NP431_05895 PF11066 Protein of unknown function (DUF2867) NP431_05895 PF13460 NAD(P)H-binding NP431_05900 PF01554 MatE NP431_05905 PF00005 ABC transporter NP431_05920 PF06965 Na+/H+ antiporter 1 NP431_05925 PF00440 Bacterial regulatory proteins, tetR family NP431_05925 PF16295 Tetracyclin repressor-like, C-terminal domain NP431_05930 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NP431_05930 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NP431_05930 PF09317 Domain of unknown function (DUF1974) NP431_05930 PF02770 Acyl-CoA dehydrogenase, middle domain NP431_05935 PF12241 Trans-2-enoyl-CoA reductase catalytic region NP431_05935 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase NP431_05935 PF07055 Enoyl reductase FAD binding domain NP431_05940 PF02080 TrkA-C domain NP431_05940 PF06826 Predicted Permease Membrane Region NP431_05945 PF00462 Glutaredoxin NP431_05950 PF00171 Aldehyde dehydrogenase family NP431_05950 PF00465 Iron-containing alcohol dehydrogenase NP431_05955 PF01418 Helix-turn-helix domain, rpiR family NP431_05955 PF01380 SIS domain NP431_05960 PF00282 Pyridoxal-dependent decarboxylase conserved domain NP431_05970 PF03956 Lysine exporter LysO NP431_05980 PF04994 TfoX C-terminal domain NP431_05980 PF04993 TfoX N-terminal domain NP431_05995 PF00512 His Kinase A (phospho-acceptor) domain NP431_05995 PF00497 Bacterial extracellular solute-binding proteins, family 3 NP431_05995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP431_06005 PF00266 Aminotransferase class-V NP431_06010 PF00291 Pyridoxal-phosphate dependent enzyme NP431_06015 PF00005 ABC transporter NP431_06015 PF00664 ABC transporter transmembrane region NP431_06020 PF00664 ABC transporter transmembrane region NP431_06020 PF00005 ABC transporter NP431_06025 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP431_06035 PF00266 Aminotransferase class-V NP431_06045 PF00939 Sodium:sulfate symporter transmembrane region NP431_06050 PF02698 DUF218 domain NP431_06055 PF03949 Malic enzyme, NAD binding domain NP431_06055 PF00390 Malic enzyme, N-terminal domain NP431_06060 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold NP431_06060 PF00271 Helicase conserved C-terminal domain NP431_06060 PF04408 Helicase associated domain (HA2) NP431_06060 PF11898 Domain of unknown function (DUF3418) NP431_06060 PF00270 DEAD/DEAH box helicase NP431_06070 PF16655 PhoD-like phosphatase, N-terminal domain NP431_06070 PF09423 PhoD-like phosphatase NP431_06075 PF01259 SAICAR synthetase NP431_06095 PF00691 OmpA family NP431_06110 PF13183 4Fe-4S dicluster domain NP431_06110 PF01565 FAD binding domain NP431_06110 PF02913 FAD linked oxidases, C-terminal domain NP431_06120 PF03466 LysR substrate binding domain NP431_06120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_06125 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NP431_06130 PF13409 Glutathione S-transferase, N-terminal domain NP431_06140 PF00491 Arginase family NP431_06145 PF01979 Amidohydrolase family NP431_06150 PF00392 Bacterial regulatory proteins, gntR family NP431_06150 PF07702 UTRA domain NP431_06165 PF03129 Anticodon binding domain NP431_06165 PF02824 TGS domain NP431_06165 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NP431_06165 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NP431_06170 PF05198 Translation initiation factor IF-3, N-terminal domain NP431_06170 PF00707 Translation initiation factor IF-3, C-terminal domain NP431_06175 PF01632 Ribosomal protein L35 NP431_06180 PF00453 Ribosomal protein L20 NP431_06190 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NP431_06190 PF01409 tRNA synthetases class II core domain (F) NP431_06195 PF01588 Putative tRNA binding domain NP431_06195 PF03147 Ferredoxin-fold anticodon binding domain NP431_06195 PF03484 tRNA synthetase B5 domain NP431_06195 PF03483 B3/4 domain NP431_06195 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain NP431_06200 PF08244 Glycosyl hydrolases family 32 C terminal NP431_06200 PF00251 Glycosyl hydrolases family 32 N-terminal domain NP431_06205 PF00294 pfkB family carbohydrate kinase NP431_06210 PF00356 Bacterial regulatory proteins, lacI family NP431_06210 PF13407 Periplasmic binding protein domain NP431_06220 PF00216 Bacterial DNA-binding protein NP431_06230 PF05724 Thiopurine S-methyltransferase (TPMT) NP431_06235 PF02222 ATP-grasp domain NP431_06240 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region NP431_06240 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NP431_06245 PF04172 LrgB-like family NP431_06250 PF03788 LrgA family NP431_06255 PF00929 Exonuclease NP431_06255 PF08411 Exonuclease C-terminal NP431_06315 PF01381 Helix-turn-helix NP431_06315 PF00717 Peptidase S24-like NP431_06340 PF01695 IstB-like ATP binding protein NP431_06500 PF08003 Protein of unknown function (DUF1698) NP431_06515 PF00375 Sodium:dicarboxylate symporter family NP431_06520 PF13460 NAD(P)H-binding NP431_06525 PF01613 Flavin reductase like domain NP431_06530 PF02277 Phosphoribosyltransferase NP431_06535 PF02654 Cobalamin-5-phosphate synthase NP431_06540 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase NP431_06555 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family NP431_06560 PF01032 FecCD transport family NP431_06565 PF00005 ABC transporter NP431_06585 PF03466 LysR substrate binding domain NP431_06585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_06595 PF01863 Protein of unknown function DUF45 NP431_06600 PF05971 RNA methyltransferase NP431_06660 PF00005 ABC transporter NP431_06665 PF01032 FecCD transport family NP431_06680 PF07687 Peptidase dimerisation domain NP431_06680 PF01546 Peptidase family M20/M25/M40 NP431_06685 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NP431_06690 PF04209 homogentisate 1,2-dioxygenase NP431_06700 PF02798 Glutathione S-transferase, N-terminal domain NP431_06700 PF14497 Glutathione S-transferase, C-terminal domain NP431_06730 PF13618 Gluconate 2-dehydrogenase subunit 3 NP431_06735 PF05199 GMC oxidoreductase NP431_06735 PF00732 GMC oxidoreductase NP431_06740 PF00034 Cytochrome c NP431_06740 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NP431_06750 PF07690 Major Facilitator Superfamily NP431_06785 PF12833 Helix-turn-helix domain NP431_06790 PF14525 AraC-binding-like domain NP431_06790 PF12833 Helix-turn-helix domain NP431_06810 PF00005 ABC transporter NP431_06815 PF02653 Branched-chain amino acid transport system / permease component NP431_06820 PF02653 Branched-chain amino acid transport system / permease component NP431_06830 PF02311 AraC-like ligand binding domain NP431_06830 PF12833 Helix-turn-helix domain NP431_06840 PF00356 Bacterial regulatory proteins, lacI family NP431_06845 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NP431_06845 PF00367 phosphotransferase system, EIIB NP431_06845 PF02378 Phosphotransferase system, EIIC NP431_06850 PF00232 Glycosyl hydrolase family 1 NP431_06855 PF02264 LamB porin NP431_06860 PF00474 Sodium:solute symporter family NP431_06865 PF06196 Protein of unknown function (DUF997) NP431_06875 PF12833 Helix-turn-helix domain NP431_06880 PF01810 LysE type translocator NP431_06885 PF03330 Lytic transglycolase NP431_06885 PF05036 Sporulation related domain NP431_06890 PF07969 Amidohydrolase family NP431_06895 PF00455 DeoR C terminal sensor domain NP431_06895 PF08220 DeoR-like helix-turn-helix domain NP431_06905 PF07719 Tetratricopeptide repeat NP431_06905 PF13181 Tetratricopeptide repeat NP431_06915 PF06039 Malate:quinone oxidoreductase (Mqo) NP431_06925 PF14759 Reductase C-terminal NP431_06925 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP431_06930 PF00106 short chain dehydrogenase NP431_06935 PF00355 Rieske [2Fe-2S] domain NP431_06940 PF00866 Ring hydroxylating beta subunit NP431_06945 PF00355 Rieske [2Fe-2S] domain NP431_06945 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NP431_06950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_06950 PF03466 LysR substrate binding domain NP431_06955 PF00004 ATPase family associated with various cellular activities (AAA) NP431_06955 PF17862 AAA+ lid domain NP431_06955 PF01434 Peptidase family M41 NP431_07005 PF04717 Type VI secretion system, phage-baseplate injector NP431_07060 PF01177 Asp/Glu/Hydantoin racemase NP431_07070 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NP431_07075 PF01425 Amidase NP431_07085 PF00266 Aminotransferase class-V NP431_07090 PF07687 Peptidase dimerisation domain NP431_07090 PF01546 Peptidase family M20/M25/M40 NP431_07100 PF02417 Chromate transporter NP431_07105 PF02417 Chromate transporter NP431_07110 PF01494 FAD binding domain NP431_07115 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NP431_07120 PF12697 Alpha/beta hydrolase family NP431_07125 PF01557 Fumarylacetoacetate (FAA) hydrolase family NP431_07130 PF01118 Semialdehyde dehydrogenase, NAD binding domain NP431_07130 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation NP431_07135 PF07836 DmpG-like communication domain NP431_07135 PF00682 HMGL-like NP431_07140 PF00083 Sugar (and other) transporter NP431_07145 PF09339 IclR helix-turn-helix domain NP431_07145 PF01614 Bacterial transcriptional regulator NP431_07155 PF02230 Phospholipase/Carboxylesterase NP431_07160 PF00072 Response regulator receiver domain NP431_07160 PF00486 Transcriptional regulatory protein, C terminal NP431_07165 PF18415 Histidine kinase receptor ArcB trans-membrane domain NP431_07165 PF01627 Hpt domain NP431_07165 PF00989 PAS fold NP431_07165 PF00072 Response regulator receiver domain NP431_07165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP431_07165 PF00512 His Kinase A (phospho-acceptor) domain NP431_07175 PF02653 Branched-chain amino acid transport system / permease component NP431_07185 PF12399 Branched-chain amino acid ATP-binding cassette transporter NP431_07185 PF00005 ABC transporter NP431_07190 PF00005 ABC transporter NP431_07195 PF01774 UreD urease accessory protein NP431_07200 PF00547 Urease, gamma subunit NP431_07205 PF00699 Urease beta subunit NP431_07210 PF01979 Amidohydrolase family NP431_07210 PF00449 Urease alpha-subunit, N-terminal domain NP431_07215 PF05194 UreE urease accessory protein, C-terminal domain NP431_07215 PF02814 UreE urease accessory protein, N-terminal domain NP431_07220 PF01730 UreF NP431_07225 PF02492 CobW/HypB/UreG, nucleotide-binding domain NP431_07235 PF00939 Sodium:sulfate symporter transmembrane region NP431_07240 PF00497 Bacterial extracellular solute-binding proteins, family 3 NP431_07240 PF00512 His Kinase A (phospho-acceptor) domain NP431_07240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP431_07260 PF03222 Tryptophan/tyrosine permease family NP431_07265 PF01966 HD domain NP431_07265 PF00072 Response regulator receiver domain NP431_07280 PF00664 ABC transporter transmembrane region NP431_07280 PF00005 ABC transporter NP431_07285 PF00005 ABC transporter NP431_07285 PF00664 ABC transporter transmembrane region NP431_07300 PF00012 Hsp70 protein NP431_07305 PF00012 Hsp70 protein NP431_07340 PF02525 Flavodoxin-like fold NP431_07345 PF00270 DEAD/DEAH box helicase NP431_07345 PF00271 Helicase conserved C-terminal domain NP431_07345 PF04408 Helicase associated domain (HA2) NP431_07345 PF11898 Domain of unknown function (DUF3418) NP431_07345 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold NP431_07360 PF02028 BCCT, betaine/carnitine/choline family transporter NP431_07370 PF01068 ATP dependent DNA ligase domain NP431_07370 PF14743 DNA ligase OB-like domain NP431_07380 PF01554 MatE NP431_07385 PF00677 Lumazine binding domain NP431_07395 PF03881 Fructosamine kinase NP431_07400 PF00072 Response regulator receiver domain NP431_07400 PF00486 Transcriptional regulatory protein, C terminal NP431_07405 PF00990 Diguanylate cyclase, GGDEF domain NP431_07405 PF05230 MASE2 domain NP431_07415 PF00877 NlpC/P60 family NP431_07420 PF12729 Four helix bundle sensory module for signal transduction NP431_07420 PF00672 HAMP domain NP431_07420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP431_07435 PF03942 DTW domain NP431_07440 PF00480 ROK family NP431_07455 PF00994 Probable molybdopterin binding domain NP431_07455 PF03453 MoeA N-terminal region (domain I and II) NP431_07455 PF03454 MoeA C-terminal region (domain IV) NP431_07460 PF12804 MobA-like NTP transferase domain NP431_07465 PF08402 TOBE domain NP431_07465 PF00005 ABC transporter NP431_07470 PF00528 Binding-protein-dependent transport system inner membrane component NP431_07475 PF12849 PBP superfamily domain NP431_07480 PF02954 Bacterial regulatory protein, Fis family NP431_07480 PF00072 Response regulator receiver domain NP431_07480 PF00158 Sigma-54 interaction domain NP431_07485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP431_07485 PF00512 His Kinase A (phospho-acceptor) domain NP431_07490 PF00005 ABC transporter NP431_07490 PF12848 ABC transporter NP431_07495 PF02634 FdhD/NarQ family NP431_07525 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NP431_07525 PF00384 Molybdopterin oxidoreductase NP431_07525 PF01568 Molydopterin dinucleotide binding domain NP431_07530 PF13247 4Fe-4S dicluster domain NP431_07545 PF00132 Bacterial transferase hexapeptide (six repeats) NP431_07545 PF12464 Maltose acetyltransferase NP431_07550 PF12833 Helix-turn-helix domain NP431_07555 PF01554 MatE NP431_07560 PF00909 Ammonium Transporter Family NP431_07570 PF02146 Sir2 family NP431_07575 PF13416 Bacterial extracellular solute-binding protein NP431_07580 PF13416 Bacterial extracellular solute-binding protein NP431_07585 PF00528 Binding-protein-dependent transport system inner membrane component NP431_07590 PF00528 Binding-protein-dependent transport system inner membrane component NP431_07595 PF00005 ABC transporter NP431_07595 PF08402 TOBE domain NP431_07610 PF01171 PP-loop family NP431_07615 PF00582 Universal stress protein family NP431_07620 PF00027 Cyclic nucleotide-binding domain NP431_07620 PF13545 Crp-like helix-turn-helix domain NP431_07635 PF00403 Heavy-metal-associated domain NP431_07645 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP NP431_07645 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NP431_07660 PF00115 Cytochrome C and Quinol oxidase polypeptide I NP431_07675 PF00072 Response regulator receiver domain NP431_07675 PF09308 LuxQ, periplasmic NP431_07675 PF00512 His Kinase A (phospho-acceptor) domain NP431_07675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP431_07700 PF08000 Bacterial PH domain NP431_07730 PF06303 MatP N-terminal domain NP431_07730 PF17414 MatP C-terminal ribbon-helix-helix domain NP431_07735 PF05362 Lon protease (S16) C-terminal proteolytic domain NP431_07735 PF13654 AAA domain NP431_07740 PF07977 FabA-like domain NP431_07745 PF04957 Ribosome modulation factor NP431_07755 PF12848 ABC transporter NP431_07755 PF00005 ABC transporter NP431_07755 PF16326 ABC transporter C-terminal domain NP431_07765 PF02926 THUMP domain NP431_07765 PF10672 S-adenosylmethionine-dependent methyltransferase NP431_07765 PF01170 Putative RNA methylase family UPF0020 NP431_07770 PF07126 Cell-division protein ZapC NP431_07775 PF01180 Dihydroorotate dehydrogenase NP431_07780 PF05088 Bacterial NAD-glutamate dehydrogenase NP431_07790 PF01433 Peptidase family M1 domain NP431_07790 PF11940 Domain of unknown function (DUF3458) Ig-like fold NP431_07790 PF17432 Domain of unknown function (DUF3458_C) ARM repeats NP431_07800 PF03572 Peptidase family S41 NP431_07800 PF00595 PDZ domain NP431_07800 PF11818 C-terminal domain of tail specific protease (DUF3340) NP431_07800 PF17804 Tail specific protease N-terminal domain NP431_07805 PF04352 ProQ/FINO family NP431_07805 PF17516 ProQ C-terminal domain NP431_07810 PF13185 GAF domain NP431_07815 PF00005 ABC transporter NP431_07815 PF00664 ABC transporter transmembrane region NP431_07820 PF04403 Paraquat-inducible protein A NP431_07825 PF02470 MlaD protein NP431_07830 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF NP431_07830 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF NP431_07830 PF01189 16S rRNA methyltransferase RsmB/F NP431_07850 PF00793 DAHP synthetase I family NP431_07855 PF04461 Protein of unknown function (DUF520) NP431_07860 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NP431_07860 PF14824 Sirohaem biosynthesis protein central NP431_07860 PF10414 Sirohaem synthase dimerisation region NP431_07865 PF00497 Bacterial extracellular solute-binding proteins, family 3 NP431_07875 PF00528 Binding-protein-dependent transport system inner membrane component NP431_07880 PF00528 Binding-protein-dependent transport system inner membrane component NP431_07885 PF00005 ABC transporter NP431_07890 PF01027 Inhibitor of apoptosis-promoting Bax1 NP431_07900 PF04358 DsrC like protein NP431_07905 PF00708 Acylphosphatase NP431_07910 PF10672 S-adenosylmethionine-dependent methyltransferase NP431_07910 PF17785 PUA-like domain NP431_07925 PF00691 OmpA family NP431_07935 PF17158 Membrane-associated sensor, integral membrane domain NP431_07935 PF00990 Diguanylate cyclase, GGDEF domain NP431_07940 PF06508 Queuosine biosynthesis protein QueC NP431_07945 PF04055 Radical SAM superfamily NP431_07960 PF14602 Hexapeptide repeat of succinyl-transferase NP431_07960 PF12464 Maltose acetyltransferase NP431_07980 PF13426 PAS domain NP431_07980 PF00563 EAL domain NP431_07980 PF00990 Diguanylate cyclase, GGDEF domain NP431_07985 PF01546 Peptidase family M20/M25/M40 NP431_07985 PF07687 Peptidase dimerisation domain NP431_07995 PF07715 TonB-dependent Receptor Plug Domain NP431_07995 PF00593 TonB dependent receptor NP431_08000 PF00293 NUDIX domain NP431_08010 PF16177 Acetyl-coenzyme A synthetase N-terminus NP431_08010 PF00501 AMP-binding enzyme NP431_08010 PF13193 AMP-binding enzyme C-terminal domain NP431_08015 PF04303 PrpF protein NP431_08020 PF00694 Aconitase C-terminal domain NP431_08020 PF00330 Aconitase family (aconitate hydratase) NP431_08025 PF00285 Citrate synthase, C-terminal domain NP431_08055 PF01970 Tripartite tricarboxylate transporter TctA family NP431_08060 PF01925 Sulfite exporter TauE/SafE NP431_08065 PF16868 NMT1-like family NP431_08070 PF00171 Aldehyde dehydrogenase family NP431_08075 PF01590 GAF domain NP431_08075 PF00158 Sigma-54 interaction domain NP431_08075 PF02954 Bacterial regulatory protein, Fis family NP431_08090 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain NP431_08090 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NP431_08095 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NP431_08100 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain NP431_08100 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain NP431_08105 PF12833 Helix-turn-helix domain NP431_08110 PF00593 TonB dependent receptor NP431_08110 PF07715 TonB-dependent Receptor Plug Domain NP431_08115 PF00072 Response regulator receiver domain NP431_08115 PF12431 Transcriptional regulator NP431_08120 PF00989 PAS fold NP431_08120 PF17203 Single cache domain 3 NP431_08120 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain NP431_08120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP431_08135 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NP431_08150 PF00696 Amino acid kinase family NP431_08150 PF13840 ACT domain NP431_08155 PF06339 Ectoine synthase NP431_08160 PF00202 Aminotransferase class-III NP431_08165 PF00583 Acetyltransferase (GNAT) family NP431_08170 PF00005 ABC transporter NP431_08170 PF00571 CBS domain NP431_08175 PF00528 Binding-protein-dependent transport system inner membrane component NP431_08180 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NP431_08190 PF00501 AMP-binding enzyme NP431_08200 PF00106 short chain dehydrogenase NP431_08210 PF00072 Response regulator receiver domain NP431_08210 PF00486 Transcriptional regulatory protein, C terminal NP431_08215 PF08521 Two-component sensor kinase N-terminal NP431_08215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP431_08215 PF00512 His Kinase A (phospho-acceptor) domain NP431_08220 PF00884 Sulfatase NP431_08240 PF05922 Peptidase inhibitor I9 NP431_08240 PF00082 Subtilase family NP431_08245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_08245 PF03466 LysR substrate binding domain NP431_08250 PF00881 Nitroreductase family NP431_08255 PF01235 Sodium:alanine symporter family NP431_08270 PF00296 Luciferase-like monooxygenase NP431_08275 PF01810 LysE type translocator NP431_08280 PF02074 Carboxypeptidase Taq (M32) metallopeptidase NP431_08285 PF08546 Ketopantoate reductase PanE/ApbA C terminal NP431_08285 PF02558 Ketopantoate reductase PanE/ApbA NP431_08295 PF13533 Biotin-lipoyl like NP431_08305 PF03279 Bacterial lipid A biosynthesis acyltransferase NP431_08315 PF04204 Homoserine O-succinyltransferase NP431_08325 PF00512 His Kinase A (phospho-acceptor) domain NP431_08325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP431_08325 PF01627 Hpt domain NP431_08325 PF00672 HAMP domain NP431_08325 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NP431_08325 PF00072 Response regulator receiver domain NP431_08350 PF04237 YjbR NP431_08355 PF01047 MarR family NP431_08365 PF00202 Aminotransferase class-III NP431_08370 PF00171 Aldehyde dehydrogenase family NP431_08375 PF04371 Porphyromonas-type peptidyl-arginine deiminase NP431_08380 PF00795 Carbon-nitrogen hydrolase NP431_08385 PF01266 FAD dependent oxidoreductase NP431_08390 PF00171 Aldehyde dehydrogenase family NP431_08395 PF01381 Helix-turn-helix NP431_08395 PF07883 Cupin domain NP431_08405 PF00120 Glutamine synthetase, catalytic domain NP431_08410 PF03553 Na+/H+ antiporter family NP431_08420 PF07969 Amidohydrolase family NP431_08430 PF01112 Asparaginase NP431_08435 PF00005 ABC transporter NP431_08440 PF00528 Binding-protein-dependent transport system inner membrane component NP431_08445 PF00528 Binding-protein-dependent transport system inner membrane component NP431_08450 PF00497 Bacterial extracellular solute-binding proteins, family 3 NP431_08465 PF08274 PhnA Zinc-Ribbon NP431_08465 PF03831 PhnA domain NP431_08470 PF01411 tRNA synthetases class II (A) NP431_08470 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NP431_08500 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NP431_08535 PF01965 DJ-1/PfpI family NP431_08535 PF12833 Helix-turn-helix domain NP431_08545 PF17754 MftR C-terminal domain NP431_08545 PF00440 Bacterial regulatory proteins, tetR family NP431_08555 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) NP431_08570 PF03173 Putative carbohydrate binding domain NP431_08570 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain NP431_08570 PF00728 Glycosyl hydrolase family 20, catalytic domain NP431_08570 PF02838 Glycosyl hydrolase family 20, domain 2 NP431_08575 PF00072 Response regulator receiver domain NP431_08575 PF00486 Transcriptional regulatory protein, C terminal NP431_08580 PF00512 His Kinase A (phospho-acceptor) domain NP431_08580 PF00672 HAMP domain NP431_08580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP431_08590 PF00171 Aldehyde dehydrogenase family NP431_08610 PF00465 Iron-containing alcohol dehydrogenase NP431_08620 PF02142 MGS-like domain NP431_08625 PF04962 KduI/IolB family NP431_08630 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NP431_08630 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NP431_08635 PF00083 Sugar (and other) transporter NP431_08640 PF01261 Xylose isomerase-like TIM barrel NP431_08645 PF00356 Bacterial regulatory proteins, lacI family NP431_08650 PF01261 Xylose isomerase-like TIM barrel NP431_08655 PF00294 pfkB family carbohydrate kinase NP431_08660 PF00171 Aldehyde dehydrogenase family NP431_08660 PF00465 Iron-containing alcohol dehydrogenase NP431_08665 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NP431_08665 PF00205 Thiamine pyrophosphate enzyme, central domain NP431_08665 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NP431_08670 PF00294 pfkB family carbohydrate kinase NP431_08685 PF04399 Glutaredoxin 2, C terminal domain NP431_08685 PF13417 Glutathione S-transferase, N-terminal domain NP431_08700 PF01740 STAS domain NP431_08705 PF00691 OmpA family NP431_08705 PF01389 OmpA-like transmembrane domain NP431_08725 PF00512 His Kinase A (phospho-acceptor) domain NP431_08725 PF01627 Hpt domain NP431_08725 PF00072 Response regulator receiver domain NP431_08725 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NP431_08725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP431_08725 PF00672 HAMP domain NP431_08730 PF02954 Bacterial regulatory protein, Fis family NP431_08730 PF00072 Response regulator receiver domain NP431_08730 PF00158 Sigma-54 interaction domain NP431_08770 PF13614 AAA domain NP431_08770 PF13807 G-rich domain on putative tyrosine kinase NP431_08770 PF02706 Chain length determinant protein NP431_08775 PF13439 Glycosyltransferase Family 4 NP431_08775 PF00534 Glycosyl transferases group 1 NP431_08785 PF02397 Bacterial sugar transferase NP431_08800 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain NP431_08800 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain NP431_08800 PF02278 Polysaccharide lyase family 8, super-sandwich domain NP431_08840 PF01337 Barstar (barnase inhibitor) NP431_08850 PF13649 Methyltransferase domain NP431_08870 PF13495 Phage integrase, N-terminal SAM-like domain NP431_08870 PF00589 Phage integrase family NP431_08950 PF02413 Caudovirales tail fibre assembly protein, lambda gpK NP431_08955 PF07471 Phage DNA packaging protein Nu1 NP431_09000 PF06147 Protein of unknown function (DUF968) NP431_09050 PF00717 Peptidase S24-like NP431_09050 PF01381 Helix-turn-helix NP431_09075 PF10065 Uncharacterized conserved protein (DUF2303) NP431_09105 PF12167 Arm DNA-binding domain NP431_09105 PF00589 Phage integrase family NP431_09130 PF13302 Acetyltransferase (GNAT) domain NP431_09135 PF00158 Sigma-54 interaction domain NP431_09135 PF18024 Helix-turn-helix domain NP431_09140 PF05128 Domain of unknown function (DUF697) NP431_09145 PF04317 YcjX-like family, DUF463 NP431_09160 PF04715 Anthranilate synthase component I, N terminal region NP431_09160 PF00425 chorismate binding enzyme NP431_09165 PF00293 NUDIX domain NP431_09170 PF03222 Tryptophan/tyrosine permease family NP431_09175 PF03315 Serine dehydratase beta chain NP431_09175 PF03313 Serine dehydratase alpha chain NP431_09180 PF01242 6-pyruvoyl tetrahydropterin synthase NP431_09185 PF01336 OB-fold nucleic acid binding domain NP431_09185 PF00152 tRNA synthetases class II (D, K and N) NP431_09195 PF00392 Bacterial regulatory proteins, gntR family NP431_09195 PF00155 Aminotransferase class I and II NP431_09205 PF00155 Aminotransferase class I and II NP431_09220 PF14579 Helix-hairpin-helix motif NP431_09220 PF02811 PHP domain NP431_09220 PF00929 Exonuclease NP431_09220 PF07733 Bacterial DNA polymerase III alpha NTPase domain NP431_09220 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NP431_09225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP431_09225 PF00672 HAMP domain NP431_09225 PF02743 Cache domain NP431_09230 PF02028 BCCT, betaine/carnitine/choline family transporter NP431_09235 PF01047 MarR family NP431_09240 PF00072 Response regulator receiver domain NP431_09240 PF00196 Bacterial regulatory proteins, luxR family NP431_09245 PF07730 Histidine kinase NP431_09245 PF17200 Single Cache domain 2 NP431_09250 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NP431_09260 PF03480 Bacterial extracellular solute-binding protein, family 7 NP431_09275 PF00753 Metallo-beta-lactamase superfamily NP431_09280 PF05951 Bacterial protein of unknown function (DUF882) NP431_09285 PF01471 Putative peptidoglycan binding domain NP431_09285 PF03734 L,D-transpeptidase catalytic domain NP431_09310 PF00925 GTP cyclohydrolase II NP431_09320 PF03989 DNA gyrase C-terminal domain, beta-propeller NP431_09320 PF00521 DNA gyrase/topoisomerase IV, subunit A NP431_09330 PF03477 ATP cone domain NP431_09330 PF00317 Ribonucleotide reductase, all-alpha domain NP431_09330 PF02867 Ribonucleotide reductase, barrel domain NP431_09335 PF00268 Ribonucleotide reductase, small chain NP431_09340 PF00175 Oxidoreductase NAD-binding domain NP431_09340 PF00970 Oxidoreductase FAD-binding domain NP431_09340 PF00111 2Fe-2S iron-sulfur cluster binding domain NP431_09345 PF16363 GDP-mannose 4,6 dehydratase NP431_09350 PF12706 Beta-lactamase superfamily domain NP431_09360 PF00994 Probable molybdopterin binding domain NP431_09375 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NP431_09380 PF03435 Saccharopine dehydrogenase NADP binding domain NP431_09380 PF16653 Saccharopine dehydrogenase C-terminal domain NP431_09385 PF00202 Aminotransferase class-III NP431_09410 PF01066 CDP-alcohol phosphatidyltransferase NP431_09415 PF01541 GIY-YIG catalytic domain NP431_09415 PF08459 UvrC Helix-hairpin-helix N-terminal NP431_09415 PF02151 UvrB/uvrC motif NP431_09420 PF00196 Bacterial regulatory proteins, luxR family NP431_09420 PF00072 Response regulator receiver domain NP431_09425 PF03104 DNA polymerase family B, exonuclease domain NP431_09425 PF00136 DNA polymerase family B NP431_09435 PF08207 Elongation factor P (EF-P) KOW-like domain NP431_09435 PF01132 Elongation factor P (EF-P) OB domain NP431_09435 PF09285 Elongation factor P, C-terminal NP431_09440 PF04269 Protein of unknown function, DUF440 NP431_09445 PF00849 RNA pseudouridylate synthase NP431_09445 PF01479 S4 domain NP431_09455 PF01300 Telomere recombination NP431_09460 PF02811 PHP domain NP431_09465 PF08056 Tryptophan operon leader peptide NP431_09470 PF00425 chorismate binding enzyme NP431_09470 PF04715 Anthranilate synthase component I, N terminal region NP431_09475 PF00117 Glutamine amidotransferase class-I NP431_09480 PF02885 Glycosyl transferase family, helical bundle domain NP431_09480 PF00591 Glycosyl transferase family, a/b domain NP431_09485 PF00218 Indole-3-glycerol phosphate synthase NP431_09485 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase NP431_09490 PF00291 Pyridoxal-phosphate dependent enzyme NP431_09495 PF00290 Tryptophan synthase alpha chain NP431_09500 PF00027 Cyclic nucleotide-binding domain NP431_09500 PF13545 Crp-like helix-turn-helix domain NP431_09505 PF00501 AMP-binding enzyme NP431_09505 PF13193 AMP-binding enzyme C-terminal domain NP431_09510 PF00375 Sodium:dicarboxylate symporter family NP431_09515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP431_09515 PF00072 Response regulator receiver domain NP431_09525 PF04279 Intracellular septation protein A NP431_09530 PF03061 Thioesterase superfamily NP431_09535 PF03795 YCII-related domain NP431_09545 PF08267 Cobalamin-independent synthase, N-terminal domain NP431_09545 PF01717 Cobalamin-independent synthase, Catalytic domain NP431_09550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_09550 PF03466 LysR substrate binding domain NP431_09565 PF00563 EAL domain NP431_09565 PF00990 Diguanylate cyclase, GGDEF domain NP431_09565 PF08447 PAS fold NP431_09565 PF08448 PAS fold NP431_09570 PF11842 Domain of unknown function (DUF3362) NP431_09570 PF04055 Radical SAM superfamily NP431_09570 PF08497 Radical SAM N-terminal NP431_09575 PF00486 Transcriptional regulatory protein, C terminal NP431_09575 PF00072 Response regulator receiver domain NP431_09580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP431_09580 PF00512 His Kinase A (phospho-acceptor) domain NP431_09580 PF00672 HAMP domain NP431_09595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_09595 PF03466 LysR substrate binding domain NP431_09600 PF00529 HlyD membrane-fusion protein of T1SS NP431_09600 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NP431_09615 PF00085 Thioredoxin NP431_09620 PF11412 Disulphide bond corrector protein DsbC NP431_09620 PF02683 Cytochrome C biogenesis protein transmembrane region NP431_09625 PF08443 RimK-like ATP-grasp domain NP431_09625 PF18030 RimK PreATP-grasp domain NP431_09630 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain NP431_09630 PF12706 Beta-lactamase superfamily domain NP431_09630 PF17770 Ribonuclease J C-terminal domain NP431_09635 PF00990 Diguanylate cyclase, GGDEF domain NP431_09635 PF00072 Response regulator receiver domain NP431_09640 PF14403 Circularly permuted ATP-grasp type 2 NP431_09655 PF04168 A predicted alpha-helical domain with a conserved ER motif. NP431_09655 PF14403 Circularly permuted ATP-grasp type 2 NP431_09660 PF01841 Transglutaminase-like superfamily NP431_09660 PF08379 Bacterial transglutaminase-like N-terminal region NP431_09665 PF00072 Response regulator receiver domain NP431_09665 PF00196 Bacterial regulatory proteins, luxR family NP431_09670 PF00512 His Kinase A (phospho-acceptor) domain NP431_09670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP431_09675 PF13247 4Fe-4S dicluster domain NP431_09680 PF03916 Polysulphide reductase, NrfD NP431_09685 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NP431_09685 PF00384 Molybdopterin oxidoreductase NP431_09685 PF01568 Molydopterin dinucleotide binding domain NP431_09690 PF00034 Cytochrome c NP431_09695 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NP431_09700 PF04403 Paraquat-inducible protein A NP431_09705 PF02470 MlaD protein NP431_09710 PF03886 ABC-type transport auxiliary lipoprotein component NP431_09715 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase NP431_09725 PF00535 Glycosyl transferase family 2 NP431_09730 PF01370 NAD dependent epimerase/dehydratase family NP431_09740 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NP431_09745 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NP431_09750 PF18073 Rubredoxin metal binding domain NP431_09755 PF06305 Lipopolysaccharide assembly protein A domain NP431_09760 PF00216 Bacterial DNA-binding protein NP431_09765 PF00575 S1 RNA binding domain NP431_09770 PF02224 Cytidylate kinase NP431_09775 PF08496 Peptidase family S49 N-terminal NP431_09775 PF01343 Peptidase family S49 NP431_09780 PF00106 short chain dehydrogenase NP431_09795 PF01336 OB-fold nucleic acid binding domain NP431_09795 PF14579 Helix-hairpin-helix motif NP431_09795 PF07733 Bacterial DNA polymerase III alpha NTPase domain NP431_09795 PF02811 PHP domain NP431_09795 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NP431_09800 PF00480 ROK family NP431_09805 PF00224 Pyruvate kinase, barrel domain NP431_09805 PF02887 Pyruvate kinase, alpha/beta domain NP431_09810 PF01734 Patatin-like phospholipase NP431_09825 PF00209 Sodium:neurotransmitter symporter family NP431_09840 PF00367 phosphotransferase system, EIIB NP431_09840 PF02378 Phosphotransferase system, EIIC NP431_09850 PF02378 Phosphotransferase system, EIIC NP431_09850 PF00367 phosphotransferase system, EIIB NP431_09850 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NP431_09855 PF01026 TatD related DNase NP431_09860 PF12169 DNA polymerase III subunits gamma and tau domain III NP431_09865 PF02223 Thymidylate kinase NP431_09870 PF02618 YceG-like family NP431_09875 PF01063 Amino-transferase class IV NP431_09880 PF02801 Beta-ketoacyl synthase, C-terminal domain NP431_09880 PF00109 Beta-ketoacyl synthase, N-terminal domain NP431_09885 PF00550 Phosphopantetheine attachment site NP431_09895 PF00698 Acyl transferase domain NP431_09900 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NP431_09900 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NP431_09905 PF02504 Fatty acid synthesis protein NP431_09910 PF01783 Ribosomal L32p protein family NP431_09915 PF02620 Large ribosomal RNA subunit accumulation protein YceD NP431_09920 PF02545 Maf-like protein NP431_09925 PF01479 S4 domain NP431_09925 PF00849 RNA pseudouridylate synthase NP431_09930 PF12111 Polyribonucleotide phosphorylase C terminal NP431_09930 PF10150 Ribonuclease E/G family NP431_09930 PF00575 S1 RNA binding domain NP431_09935 PF01740 STAS domain NP431_09935 PF00916 Sulfate permease family NP431_09940 PF01451 Low molecular weight phosphotyrosine protein phosphatase NP431_09945 PF12557 Cob(I)alamin adenosyltransferase N terminal NP431_09945 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP NP431_09955 PF00485 Phosphoribulokinase / Uridine kinase family NP431_09960 PF10609 NUBPL iron-transfer P-loop NTPase NP431_09965 PF01588 Putative tRNA binding domain NP431_09965 PF09334 tRNA synthetases class I (M) NP431_09975 PF00392 Bacterial regulatory proteins, gntR family NP431_09975 PF07840 FadR C-terminal domain NP431_09980 PF06450 Bacterial Na+/H+ antiporter B (NhaB) NP431_09985 PF02600 Disulfide bond formation protein DsbB NP431_09990 PF02810 SEC-C motif NP431_09990 PF07517 SecA DEAD-like domain NP431_09990 PF01043 SecA preprotein cross-linking domain NP431_09990 PF07516 SecA Wing and Scaffold domain NP431_09995 PF01207 Dihydrouridine synthase (Dus) NP431_10000 PF08448 PAS fold NP431_10000 PF00990 Diguanylate cyclase, GGDEF domain NP431_10005 PF02903 Alpha amylase, N-terminal ig-like domain NP431_10005 PF00128 Alpha amylase, catalytic domain NP431_10010 PF00005 ABC transporter NP431_10015 PF02653 Branched-chain amino acid transport system / permease component NP431_10025 PF04217 Protein of unknown function, DUF412 NP431_10030 PF00871 Acetokinase family NP431_10035 PF07085 DRTGG domain NP431_10035 PF01515 Phosphate acetyl/butaryl transferase NP431_10040 PF13194 Domain of unknown function (DUF4010) NP431_10045 PF13409 Glutathione S-transferase, N-terminal domain NP431_10050 PF00005 ABC transporter NP431_10050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NP431_10055 PF00005 ABC transporter NP431_10055 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NP431_10060 PF00528 Binding-protein-dependent transport system inner membrane component NP431_10060 PF12911 N-terminal TM domain of oligopeptide transport permease C NP431_10065 PF00528 Binding-protein-dependent transport system inner membrane component NP431_10070 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NP431_10075 PF02391 MoaE protein NP431_10080 PF02597 ThiS family NP431_10085 PF01967 MoaC family NP431_10090 PF00994 Probable molybdopterin binding domain NP431_10095 PF06463 Molybdenum Cofactor Synthesis C NP431_10095 PF04055 Radical SAM superfamily NP431_10100 PF01933 Uncharacterised protein family UPF0052 NP431_10105 PF01627 Hpt domain NP431_10110 PF00158 Sigma-54 interaction domain NP431_10110 PF00072 Response regulator receiver domain NP431_10110 PF02954 Bacterial regulatory protein, Fis family NP431_10115 PF04851 Type III restriction enzyme, res subunit NP431_10115 PF00271 Helicase conserved C-terminal domain NP431_10115 PF12344 Ultra-violet resistance protein B NP431_10115 PF17757 UvrB interaction domain NP431_10115 PF02151 UvrB/uvrC motif NP431_10125 PF02508 Rnf-Nqr subunit, membrane protein NP431_10130 PF04060 Putative Fe-S cluster NP431_10135 PF12838 4Fe-4S dicluster domain NP431_10135 PF13375 RnfC Barrel sandwich hybrid domain NP431_10135 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NP431_10135 PF10531 SLBB domain NP431_10140 PF03116 NQR2, RnfD, RnfE family NP431_10145 PF04205 FMN-binding domain NP431_10150 PF02508 Rnf-Nqr subunit, membrane protein NP431_10155 PF10576 Iron-sulfur binding domain of endonuclease III NP431_10155 PF00633 Helix-hairpin-helix motif NP431_10155 PF00730 HhH-GPD superfamily base excision DNA repair protein NP431_10160 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NP431_10165 PF10952 Protein of unknown function (DUF2753) NP431_10170 PF18393 MotY N-terminal domain NP431_10170 PF00691 OmpA family NP431_10175 PF00929 Exonuclease NP431_10180 PF03553 Na+/H+ antiporter family NP431_10180 PF13726 Na+-H+ antiporter family NP431_10190 PF00462 Glutaredoxin NP431_10195 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NP431_10195 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NP431_10210 PF00171 Aldehyde dehydrogenase family NP431_10210 PF00465 Iron-containing alcohol dehydrogenase NP431_10215 PF01914 MarC family integral membrane protein NP431_10220 PF00027 Cyclic nucleotide-binding domain NP431_10220 PF00520 Ion transport protein NP431_10225 PF02774 Semialdehyde dehydrogenase, dimerisation domain NP431_10225 PF01118 Semialdehyde dehydrogenase, NAD binding domain NP431_10230 PF03553 Na+/H+ antiporter family NP431_10245 PF04245 37-kD nucleoid-associated bacterial protein NP431_10250 PF07208 Protein of unknown function (DUF1414) NP431_10255 PF00884 Sulfatase NP431_10255 PF11893 Domain of unknown function (DUF3413) NP431_10265 PF01497 Periplasmic binding protein NP431_10270 PF00593 TonB dependent receptor NP431_10270 PF07715 TonB-dependent Receptor Plug Domain NP431_10275 PF01032 FecCD transport family NP431_10280 PF01032 FecCD transport family NP431_10285 PF00005 ABC transporter NP431_10290 PF01037 Lrp/AsnC ligand binding domain NP431_10295 PF01053 Cys/Met metabolism PLP-dependent enzyme NP431_10300 PF00497 Bacterial extracellular solute-binding proteins, family 3 NP431_10305 PF00528 Binding-protein-dependent transport system inner membrane component NP431_10310 PF00005 ABC transporter NP431_10315 PF00850 Histone deacetylase domain NP431_10320 PF00106 short chain dehydrogenase NP431_10325 PF01131 DNA topoisomerase NP431_10325 PF01751 Toprim domain NP431_10330 PF00881 Nitroreductase family NP431_10335 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP431_10335 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NP431_10340 PF01343 Peptidase family S49 NP431_10345 PF00710 Asparaginase, N-terminal NP431_10345 PF17763 Glutaminase/Asparaginase C-terminal domain NP431_10350 PF07023 Protein of unknown function (DUF1315) NP431_10360 PF01641 SelR domain NP431_10365 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NP431_10365 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NP431_10370 PF01263 Aldose 1-epimerase NP431_10375 PF13847 Methyltransferase domain NP431_10390 PF00245 Alkaline phosphatase NP431_10395 PF05552 Conserved TM helix NP431_10395 PF00924 Mechanosensitive ion channel NP431_10400 PF03692 Putative zinc- or iron-chelating domain NP431_10405 PF04226 Transglycosylase associated protein NP431_10410 PF03692 Putative zinc- or iron-chelating domain NP431_10415 PF00230 Major intrinsic protein NP431_10420 PF02132 RecR protein NP431_10420 PF13662 Toprim domain NP431_10425 PF02575 YbaB/EbfC DNA-binding family NP431_10430 PF12169 DNA polymerase III subunits gamma and tau domain III NP431_10430 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding NP431_10430 PF12170 DNA polymerase III tau subunit V interacting with alpha NP431_10435 PF00156 Phosphoribosyl transferase domain NP431_10440 PF04304 Protein of unknown function (DUF454) NP431_10450 PF00072 Response regulator receiver domain NP431_10455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_10455 PF03466 LysR substrate binding domain NP431_10460 PF00156 Phosphoribosyl transferase domain NP431_10465 PF02674 Colicin V production protein NP431_10470 PF05036 Sporulation related domain NP431_10475 PF08245 Mur ligase middle domain NP431_10475 PF02875 Mur ligase family, glutamate ligase domain NP431_10480 PF01039 Carboxyl transferase domain NP431_10480 PF17848 Acetyl-coA carboxylase zinc finger domain NP431_10485 PF01416 tRNA pseudouridine synthase NP431_10495 PF02774 Semialdehyde dehydrogenase, dimerisation domain NP431_10495 PF01118 Semialdehyde dehydrogenase, NAD binding domain NP431_10500 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NP431_10500 PF11890 Domain of unknown function (DUF3410) NP431_10500 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NP431_10505 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NP431_10515 PF00455 DeoR C terminal sensor domain NP431_10515 PF08220 DeoR-like helix-turn-helix domain NP431_10530 PF00109 Beta-ketoacyl synthase, N-terminal domain NP431_10530 PF02801 Beta-ketoacyl synthase, C-terminal domain NP431_10535 PF01266 FAD dependent oxidoreductase NP431_10535 PF05430 S-adenosyl-L-methionine-dependent methyltransferase NP431_10540 PF03358 NADPH-dependent FMN reductase NP431_10545 PF08891 YfcL protein NP431_10550 PF04315 Elongation factor P hydroxylase NP431_10555 PF03458 UPF0126 domain NP431_10560 PF01264 Chorismate synthase NP431_10565 PF05175 Methyltransferase small domain NP431_10570 PF01713 Smr domain NP431_10575 PF00300 Histidine phosphatase superfamily (branch 1) NP431_10580 PF00675 Insulinase (Peptidase family M16) NP431_10580 PF05193 Peptidase M16 inactive domain NP431_10580 PF16187 Middle or third domain of peptidase_M16 NP431_10590 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NP431_10590 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NP431_10590 PF00378 Enoyl-CoA hydratase/isomerase NP431_10595 PF02803 Thiolase, C-terminal domain NP431_10595 PF00108 Thiolase, N-terminal domain NP431_10600 PF04542 Sigma-70 region 2 NP431_10600 PF08281 Sigma-70, region 4 NP431_10610 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) NP431_10615 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) NP431_10620 PF04333 MlaA lipoprotein NP431_10630 PF03918 Cytochrome C biogenesis protein NP431_10635 PF08534 Redoxin NP431_10640 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal NP431_10640 PF01578 Cytochrome C assembly protein NP431_10645 PF03100 CcmE NP431_10650 PF04995 Heme exporter protein D (CcmD) NP431_10655 PF01578 Cytochrome C assembly protein NP431_10660 PF03379 CcmB protein NP431_10665 PF00005 ABC transporter NP431_10675 PF01584 CheW-like domain NP431_10685 PF13614 AAA domain NP431_10690 PF00072 Response regulator receiver domain NP431_10690 PF01339 CheB methylesterase NP431_10695 PF00072 Response regulator receiver domain NP431_10695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP431_10695 PF01627 Hpt domain NP431_10695 PF01584 CheW-like domain NP431_10695 PF02895 Signal transducing histidine kinase, homodimeric domain NP431_10700 PF04344 Chemotaxis phosphatase, CheZ NP431_10705 PF00072 Response regulator receiver domain NP431_10710 PF04539 Sigma-70 region 3 NP431_10710 PF04542 Sigma-70 region 2 NP431_10710 PF04545 Sigma-70, region 4 NP431_10715 PF10609 NUBPL iron-transfer P-loop NTPase NP431_10720 PF00448 SRP54-type protein, GTPase domain NP431_10725 PF00771 FHIPEP family NP431_10730 PF01312 FlhB HrpN YscU SpaS Family NP431_10735 PF01311 Bacterial export proteins, family 1 NP431_10740 PF01313 Bacterial export proteins, family 3 NP431_10745 PF00813 FliP family NP431_10750 PF04347 Flagellar biosynthesis protein, FliO NP431_10755 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NP431_10760 PF02154 Flagellar motor switch protein FliM NP431_10760 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NP431_10780 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NP431_10780 PF18269 T3SS EscN ATPase C-terminal domain NP431_10790 PF01706 FliG C-terminal domain NP431_10790 PF14841 FliG middle domain NP431_10790 PF14842 FliG N-terminal domain NP431_10795 PF01514 Secretory protein of YscJ/FliF family NP431_10795 PF08345 Flagellar M-ring protein C-terminal NP431_10800 PF02049 Flagellar hook-basal body complex protein FliE NP431_10805 PF02954 Bacterial regulatory protein, Fis family NP431_10805 PF00072 Response regulator receiver domain NP431_10805 PF00158 Sigma-54 interaction domain NP431_10810 PF00512 His Kinase A (phospho-acceptor) domain NP431_10810 PF13188 PAS domain NP431_10810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP431_10815 PF06490 Flagellar regulatory protein FleQ NP431_10815 PF00158 Sigma-54 interaction domain NP431_10815 PF02954 Bacterial regulatory protein, Fis family NP431_10820 PF02561 Flagellar protein FliS NP431_10830 PF07196 Flagellin hook IN motif NP431_10830 PF07195 Flagellar hook-associated protein 2 C-terminus NP431_10830 PF02465 Flagellar hook-associated protein 2 N-terminus NP431_10835 PF03646 FlaG protein NP431_10840 PF00700 Bacterial flagellin C-terminal helical region NP431_10840 PF07196 Flagellin hook IN motif NP431_10840 PF00669 Bacterial flagellin N-terminal helical region NP431_10845 PF00669 Bacterial flagellin N-terminal helical region NP431_10845 PF07196 Flagellin hook IN motif NP431_10845 PF00700 Bacterial flagellin C-terminal helical region NP431_10850 PF00700 Bacterial flagellin C-terminal helical region NP431_10850 PF07196 Flagellin hook IN motif NP431_10850 PF00669 Bacterial flagellin N-terminal helical region NP431_10855 PF04261 Dyp-type peroxidase family NP431_10860 PF11143 Protein of unknown function (DUF2919) NP431_10870 PF13698 Domain of unknown function (DUF4156) NP431_10880 PF03960 ArsC family NP431_10885 PF07687 Peptidase dimerisation domain NP431_10885 PF01546 Peptidase family M20/M25/M40 NP431_10900 PF06804 NlpB/DapX lipoprotein NP431_10905 PF00701 Dihydrodipicolinate synthetase family NP431_10910 PF01842 ACT domain NP431_10915 PF00578 AhpC/TSA family NP431_10920 PF01594 AI-2E family transporter NP431_10930 PF13181 Tetratricopeptide repeat NP431_10930 PF01435 Peptidase family M48 NP431_10935 PF03960 ArsC family NP431_10940 PF03358 NADPH-dependent FMN reductase NP431_10955 PF00860 Permease family NP431_10965 PF00586 AIR synthase related protein, N-terminal domain NP431_10965 PF02769 AIR synthase related protein, C-terminal domain NP431_10970 PF00551 Formyl transferase NP431_10975 PF13230 Glutamine amidotransferases class-II NP431_10980 PF13580 SIS domain NP431_10985 PF02770 Acyl-CoA dehydrogenase, middle domain NP431_10985 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NP431_10985 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NP431_10985 PF09317 Domain of unknown function (DUF1974) NP431_10990 PF00916 Sulfate permease family NP431_10990 PF01740 STAS domain NP431_11000 PF00929 Exonuclease NP431_11005 PF00075 RNase H NP431_11010 PF08241 Methyltransferase domain NP431_11015 PF00753 Metallo-beta-lactamase superfamily NP431_11015 PF16123 Hydroxyacylglutathione hydrolase C-terminus NP431_11020 PF01476 LysM domain NP431_11020 PF01464 Transglycosylase SLT domain NP431_11030 PF03372 Endonuclease/Exonuclease/phosphatase family NP431_11035 PF00543 Nitrogen regulatory protein P-II NP431_11040 PF00034 Cytochrome c NP431_11045 PF01171 PP-loop family NP431_11045 PF09179 TilS substrate binding domain NP431_11045 PF11734 TilS substrate C-terminal domain NP431_11050 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit NP431_11055 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NP431_11055 PF07733 Bacterial DNA polymerase III alpha NTPase domain NP431_11055 PF14579 Helix-hairpin-helix motif NP431_11055 PF02811 PHP domain NP431_11055 PF01336 OB-fold nucleic acid binding domain NP431_11060 PF01351 Ribonuclease HII NP431_11065 PF02684 Lipid-A-disaccharide synthetase NP431_11070 PF00132 Bacterial transferase hexapeptide (six repeats) NP431_11070 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 NP431_11075 PF07977 FabA-like domain NP431_11080 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD NP431_11080 PF00132 Bacterial transferase hexapeptide (six repeats) NP431_11085 PF03938 Outer membrane protein (OmpH-like) NP431_11090 PF01103 Surface antigen NP431_11090 PF07244 Surface antigen variable number repeat NP431_11095 PF02163 Peptidase family M50 NP431_11095 PF17820 PDZ domain NP431_11100 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain NP431_11100 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase NP431_11100 PF13288 DXP reductoisomerase C-terminal domain NP431_11110 PF01255 Putative undecaprenyl diphosphate synthase NP431_11115 PF01765 Ribosome recycling factor NP431_11120 PF00696 Amino acid kinase family NP431_11125 PF00889 Elongation factor TS NP431_11130 PF00318 Ribosomal protein S2 NP431_11135 PF00557 Metallopeptidase family M24 NP431_11140 PF08335 GlnD PII-uridylyltransferase NP431_11140 PF01966 HD domain NP431_11140 PF01909 Nucleotidyltransferase domain NP431_11140 PF01842 ACT domain NP431_11145 PF11944 Protein of unknown function (DUF3461) NP431_11150 PF00849 RNA pseudouridylate synthase NP431_11180 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 NP431_11185 PF03806 AbgT putative transporter family NP431_11190 PF00444 Ribosomal protein L36 NP431_11195 PF01197 Ribosomal protein L31 NP431_11200 PF18389 TrmO C-terminal domain NP431_11200 PF01980 tRNA-methyltransferase O NP431_11205 PF03129 Anticodon binding domain NP431_11205 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NP431_11205 PF04073 Aminoacyl-tRNA editing domain NP431_11210 PF06786 Uncharacterised protein family (UPF0253) NP431_11220 PF00209 Sodium:neurotransmitter symporter family NP431_11230 PF01272 Transcription elongation factor, GreA/GreB, C-term NP431_11230 PF03449 Transcription elongation factor, N-terminal NP431_11235 PF00271 Helicase conserved C-terminal domain NP431_11235 PF00570 HRDC domain NP431_11235 PF16124 RecQ zinc-binding NP431_11235 PF09382 RQC domain NP431_11235 PF00270 DEAD/DEAH box helicase NP431_11240 PF11799 impB/mucB/samB family C-terminal domain NP431_11240 PF00817 impB/mucB/samB family NP431_11240 PF11798 IMS family HHH motif NP431_11250 PF04400 (Na+)-NQR maturation NqrM NP431_11255 PF02424 ApbE family NP431_11260 PF00970 Oxidoreductase FAD-binding domain NP431_11260 PF00175 Oxidoreductase NAD-binding domain NP431_11260 PF00111 2Fe-2S iron-sulfur cluster binding domain NP431_11265 PF02508 Rnf-Nqr subunit, membrane protein NP431_11270 PF02508 Rnf-Nqr subunit, membrane protein NP431_11275 PF04205 FMN-binding domain NP431_11280 PF03116 NQR2, RnfD, RnfE family NP431_11285 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) NP431_11285 PF11973 NQRA C-terminal domain NP431_11290 PF01722 BolA-like protein NP431_11295 PF05175 Methyltransferase small domain NP431_11305 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NP431_11310 PF07690 Major Facilitator Superfamily NP431_11320 PF04545 Sigma-70, region 4 NP431_11320 PF04542 Sigma-70 region 2 NP431_11335 PF03502 Nucleoside-specific channel-forming protein, Tsx NP431_11340 PF02558 Ketopantoate reductase PanE/ApbA NP431_11340 PF08546 Ketopantoate reductase PanE/ApbA C terminal NP431_11345 PF01965 DJ-1/PfpI family NP431_11350 PF00266 Aminotransferase class-V NP431_11355 PF17151 Periplasmic sensor domain NP431_11355 PF00990 Diguanylate cyclase, GGDEF domain NP431_11360 PF02657 Fe-S metabolism associated domain NP431_11365 PF00899 ThiF family NP431_11370 PF06725 3D domain NP431_11370 PF03562 MltA specific insert domain NP431_11380 PF00696 Amino acid kinase family NP431_11380 PF00583 Acetyltransferase (GNAT) family NP431_11385 PF13538 UvrD-like helicase C-terminal domain NP431_11390 PF12705 PD-(D/E)XK nuclease superfamily NP431_11390 PF00580 UvrD/REP helicase N-terminal domain NP431_11390 PF13361 UvrD-like helicase C-terminal domain NP431_11395 PF17946 RecC C-terminal domain NP431_11400 PF00884 Sulfatase NP431_11400 PF11893 Domain of unknown function (DUF3413) NP431_11410 PF03466 LysR substrate binding domain NP431_11410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_11415 PF07130 YebG protein NP431_11425 PF14602 Hexapeptide repeat of succinyl-transferase NP431_11425 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle NP431_11430 PF03009 Glycerophosphoryl diester phosphodiesterase family NP431_11435 PF07690 Major Facilitator Superfamily NP431_11440 PF00230 Major intrinsic protein NP431_11445 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NP431_11445 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NP431_11450 PF00455 DeoR C terminal sensor domain NP431_11450 PF08220 DeoR-like helix-turn-helix domain NP431_11455 PF01266 FAD dependent oxidoreductase NP431_11455 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NP431_11460 PF01544 CorA-like Mg2+ transporter protein NP431_11480 PF00356 Bacterial regulatory proteins, lacI family NP431_11485 PF00356 Bacterial regulatory proteins, lacI family NP431_11490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_11490 PF03466 LysR substrate binding domain NP431_11520 PF00535 Glycosyl transferase family 2 NP431_11540 PF00437 Type II/IV secretion system protein NP431_11570 PF13629 Pilus formation protein N terminal region NP431_11570 PF00263 Bacterial type II and III secretion system protein NP431_11570 PF04972 BON domain NP431_11595 PF12833 Helix-turn-helix domain NP431_11595 PF02805 Metal binding domain of Ada NP431_11600 PF00501 AMP-binding enzyme NP431_11610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_11610 PF03466 LysR substrate binding domain NP431_11615 PF00009 Elongation factor Tu GTP binding domain NP431_11615 PF03764 Elongation factor G, domain IV NP431_11615 PF00679 Elongation factor G C-terminus NP431_11615 PF14492 Elongation Factor G, domain II NP431_11615 PF03144 Elongation factor Tu domain 2 NP431_11620 PF18073 Rubredoxin metal binding domain NP431_11630 PF18429 Domain of unknown function (DUF5609) NP431_11640 PF01048 Phosphorylase superfamily NP431_11645 PF01676 Metalloenzyme superfamily NP431_11650 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain NP431_11650 PF00591 Glycosyl transferase family, a/b domain NP431_11650 PF02885 Glycosyl transferase family, helical bundle domain NP431_11655 PF01791 DeoC/LacD family aldolase NP431_11660 PF07662 Na+ dependent nucleoside transporter C-terminus NP431_11660 PF07670 Nucleoside recognition NP431_11660 PF01773 Na+ dependent nucleoside transporter N-terminus NP431_11665 PF01026 TatD related DNase NP431_11675 PF16658 Class II release factor RF3, C-terminal domain NP431_11675 PF03144 Elongation factor Tu domain 2 NP431_11675 PF00009 Elongation factor Tu GTP binding domain NP431_11690 PF13508 Acetyltransferase (GNAT) domain NP431_11695 PF02036 SCP-2 sterol transfer family NP431_11700 PF03707 Bacterial signalling protein N terminal repeat NP431_11700 PF00990 Diguanylate cyclase, GGDEF domain NP431_11700 PF00563 EAL domain NP431_11705 PF01136 Peptidase family U32 NP431_11710 PF01136 Peptidase family U32 NP431_11715 PF01554 MatE NP431_11720 PF13181 Tetratricopeptide repeat NP431_11720 PF07719 Tetratricopeptide repeat NP431_11725 PF03725 3' exoribonuclease family, domain 2 NP431_11725 PF00575 S1 RNA binding domain NP431_11725 PF00013 KH domain NP431_11725 PF01138 3' exoribonuclease family, domain 1 NP431_11725 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NP431_11730 PF00312 Ribosomal protein S15 NP431_11735 PF01509 TruB family pseudouridylate synthase (N terminal domain) NP431_11735 PF09157 Pseudouridine synthase II TruB, C-terminal NP431_11735 PF16198 tRNA pseudouridylate synthase B C-terminal domain NP431_11740 PF02033 Ribosome-binding factor A NP431_11745 PF00009 Elongation factor Tu GTP binding domain NP431_11745 PF11987 Translation-initiation factor 2 NP431_11745 PF08364 Bacterial translation initiation factor IF-2 associated region NP431_11745 PF04760 Translation initiation factor IF-2, N-terminal region NP431_11750 PF13184 NusA-like KH domain NP431_11750 PF08529 NusA N-terminal domain NP431_11750 PF00575 S1 RNA binding domain NP431_11755 PF02576 RimP N-terminal domain NP431_11755 PF17384 RimP C-terminal SH3 domain NP431_11770 PF03840 Preprotein translocase SecG subunit NP431_11775 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NP431_11775 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NP431_11775 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NP431_11775 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NP431_11780 PF00809 Pterin binding enzyme NP431_11785 PF00004 ATPase family associated with various cellular activities (AAA) NP431_11785 PF01434 Peptidase family M41 NP431_11785 PF06480 FtsH Extracellular NP431_11785 PF17862 AAA+ lid domain NP431_11790 PF01728 FtsJ-like methyltransferase NP431_11795 PF01985 CRS1 / YhbY (CRM) domain NP431_11800 PF03449 Transcription elongation factor, N-terminal NP431_11800 PF01272 Transcription elongation factor, GreA/GreB, C-term NP431_11805 PF13609 Gram-negative porin NP431_11810 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family NP431_11820 PF00579 tRNA synthetases class I (W and Y) NP431_11825 PF08525 Opacity-associated protein A N-terminal motif NP431_11825 PF01476 LysM domain NP431_11825 PF01551 Peptidase family M23 NP431_11830 PF00873 AcrB/AcrD/AcrF family NP431_11835 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NP431_11840 PF01521 Iron-sulphur cluster biosynthesis NP431_11845 PF00202 Aminotransferase class-III NP431_11850 PF01594 AI-2E family transporter NP431_11855 PF08468 Methyltransferase small domain N-terminal NP431_11855 PF05175 Methyltransferase small domain NP431_11865 PF00072 Response regulator receiver domain NP431_11865 PF00512 His Kinase A (phospho-acceptor) domain NP431_11865 PF09308 LuxQ, periplasmic NP431_11865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP431_11870 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NP431_11875 PF00528 Binding-protein-dependent transport system inner membrane component NP431_11880 PF00528 Binding-protein-dependent transport system inner membrane component NP431_11880 PF12911 N-terminal TM domain of oligopeptide transport permease C NP431_11885 PF00005 ABC transporter NP431_11885 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NP431_11890 PF00005 ABC transporter NP431_11890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NP431_11900 PF01869 BadF/BadG/BcrA/BcrD ATPase family NP431_11905 PF00728 Glycosyl hydrolase family 20, catalytic domain NP431_11905 PF02838 Glycosyl hydrolase family 20, domain 2 NP431_11910 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain NP431_11910 PF06165 Glycosyltransferase family 36 NP431_11915 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NP431_11915 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NP431_11915 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NP431_11915 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NP431_11920 PF08402 TOBE domain NP431_11920 PF00005 ABC transporter NP431_11930 PF13416 Bacterial extracellular solute-binding protein NP431_11935 PF00909 Ammonium Transporter Family NP431_11940 PF00543 Nitrogen regulatory protein P-II NP431_11945 PF06062 Uncharacterised protein family (UPF0231) NP431_11950 PF05651 Putative sugar diacid recognition NP431_11950 PF17853 GGDEF-like domain NP431_11950 PF13556 PucR C-terminal helix-turn-helix domain NP431_11955 PF02447 GntP family permease NP431_11960 PF02595 Glycerate kinase family NP431_11965 PF00330 Aconitase family (aconitate hydratase) NP431_11965 PF06434 Aconitate hydratase 2 N-terminus NP431_11965 PF11791 Aconitate B N-terminal domain NP431_11970 PF01734 Patatin-like phospholipase NP431_11975 PF14814 Bifunctional transglycosylase second domain NP431_11975 PF00912 Transglycosylase NP431_11975 PF00905 Penicillin binding protein transpeptidase domain NP431_11980 PF08482 ATP-dependent helicase C-terminal NP431_11980 PF00270 DEAD/DEAH box helicase NP431_11980 PF04408 Helicase associated domain (HA2) NP431_11980 PF00271 Helicase conserved C-terminal domain NP431_11985 PF17746 SfsA N-terminal OB domain NP431_11985 PF03749 Sugar fermentation stimulation protein RE domain NP431_11990 PF01258 Prokaryotic dksA/traR C4-type zinc finger NP431_11995 PF00749 tRNA synthetases class I (E and Q), catalytic domain NP431_12000 PF01743 Poly A polymerase head domain NP431_12000 PF12626 Polymerase A arginine-rich C-terminus NP431_12000 PF12627 Probable RNA and SrmB- binding site of polymerase A NP431_12005 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NP431_12010 PF02548 Ketopantoate hydroxymethyltransferase NP431_12015 PF02569 Pantoate-beta-alanine ligase NP431_12020 PF01061 ABC-2 type transporter NP431_12025 PF00005 ABC transporter NP431_12030 PF01740 STAS domain NP431_12030 PF00916 Sulfate permease family NP431_12035 PF00484 Carbonic anhydrase NP431_12040 PF00156 Phosphoribosyl transferase domain NP431_12045 PF00440 Bacterial regulatory proteins, tetR family NP431_12050 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP431_12050 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NP431_12055 PF02817 e3 binding domain NP431_12055 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NP431_12055 PF00364 Biotin-requiring enzyme NP431_12060 PF17831 Pyruvate dehydrogenase E1 component middle domain NP431_12060 PF00456 Transketolase, thiamine diphosphate binding domain NP431_12065 PF07729 FCD domain NP431_12065 PF00392 Bacterial regulatory proteins, gntR family NP431_12070 PF01510 N-acetylmuramoyl-L-alanine amidase NP431_12075 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NP431_12075 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain NP431_12080 PF07963 Prokaryotic N-terminal methylation motif NP431_12080 PF00114 Pilin (bacterial filament) NP431_12085 PF00437 Type II/IV secretion system protein NP431_12085 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NP431_12090 PF00482 Type II secretion system (T2SS), protein F NP431_12095 PF01478 Type IV leader peptidase family NP431_12095 PF06750 Bacterial Peptidase A24 N-terminal domain NP431_12100 PF01121 Dephospho-CoA kinase NP431_12105 PF07072 Cell division protein NP431_12110 PF03884 DNA gyrase inhibitor YacG NP431_12115 PF01245 Ribosomal protein L19 NP431_12120 PF01746 tRNA (Guanine-1)-methyltransferase NP431_12125 PF05239 PRC-barrel domain NP431_12125 PF01782 RimM N-terminal domain NP431_12130 PF00886 Ribosomal protein S16 NP431_12135 PF00448 SRP54-type protein, GTPase domain NP431_12135 PF02881 SRP54-type protein, helical bundle domain NP431_12135 PF02978 Signal peptide binding domain NP431_12140 PF01578 Cytochrome C assembly protein NP431_12145 PF01595 Cyclin M transmembrane N-terminal domain NP431_12145 PF03471 Transporter associated domain NP431_12145 PF00571 CBS domain NP431_12150 PF02664 S-Ribosylhomocysteinase (LuxS) NP431_12160 PF04262 Glutamate-cysteine ligase NP431_12165 PF00675 Insulinase (Peptidase family M16) NP431_12165 PF05193 Peptidase M16 inactive domain NP431_12170 PF09335 SNARE associated Golgi protein NP431_12175 PF08240 Alcohol dehydrogenase GroES-like domain NP431_12175 PF00107 Zinc-binding dehydrogenase NP431_12180 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit NP431_12185 PF00364 Biotin-requiring enzyme NP431_12185 PF02436 Conserved carboxylase domain NP431_12185 PF00682 HMGL-like NP431_12190 PF04277 Oxaloacetate decarboxylase, gamma chain NP431_12245 PF02599 Global regulator protein family NP431_12250 PF00696 Amino acid kinase family NP431_12250 PF13840 ACT domain NP431_12250 PF01842 ACT domain NP431_12255 PF02272 DHHA1 domain NP431_12255 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NP431_12255 PF01411 tRNA synthetases class II (A) NP431_12260 PF02631 RecX family NP431_12265 PF00154 recA bacterial DNA recombination protein NP431_12270 PF02464 Competence-damaged protein NP431_12275 PF00488 MutS domain V NP431_12275 PF05190 MutS family domain IV NP431_12275 PF01624 MutS domain I NP431_12275 PF05192 MutS domain III NP431_12275 PF05188 MutS domain II NP431_12285 PF01551 Peptidase family M23 NP431_12285 PF01476 LysM domain NP431_12295 PF01975 Survival protein SurE NP431_12300 PF01142 tRNA pseudouridine synthase D (TruD) NP431_12305 PF02542 YgbB family NP431_12310 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NP431_12315 PF04977 Septum formation initiator NP431_12320 PF03952 Enolase, N-terminal domain NP431_12320 PF00113 Enolase, C-terminal TIM barrel domain NP431_12325 PF06418 CTP synthase N-terminus NP431_12325 PF00117 Glutamine amidotransferase class-I NP431_12330 PF03819 MazG nucleotide pyrophosphohydrolase domain NP431_12335 PF04607 Region found in RelA / SpoT proteins NP431_12335 PF13291 ACT domain NP431_12335 PF02824 TGS domain NP431_12340 PF01938 TRAM domain NP431_12340 PF05958 tRNA (Uracil-5-)-methyltransferase NP431_12345 PF00672 HAMP domain NP431_12345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP431_12345 PF00512 His Kinase A (phospho-acceptor) domain NP431_12345 PF00072 Response regulator receiver domain NP431_12345 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NP431_12345 PF01627 Hpt domain NP431_12350 PF01648 4'-phosphopantetheinyl transferase superfamily NP431_12355 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ NP431_12360 PF02565 Recombination protein O C terminal NP431_12360 PF11967 Recombination protein O N terminal NP431_12365 PF07650 KH domain NP431_12365 PF01926 50S ribosome-binding GTPase NP431_12370 PF14622 Ribonuclease-III-like NP431_12370 PF00035 Double-stranded RNA binding motif NP431_12375 PF10502 Signal peptidase, peptidase S26 NP431_12380 PF00679 Elongation factor G C-terminus NP431_12380 PF00009 Elongation factor Tu GTP binding domain NP431_12380 PF03144 Elongation factor Tu domain 2 NP431_12380 PF06421 GTP-binding protein LepA C-terminus NP431_12390 PF03888 MucB/RseB N-terminal domain NP431_12390 PF17188 MucB/RseB C-terminal domain NP431_12395 PF03872 Anti sigma-E protein RseA, N-terminal domain NP431_12395 PF03873 Anti sigma-E protein RseA, C-terminal domain NP431_12400 PF04542 Sigma-70 region 2 NP431_12400 PF08281 Sigma-70, region 4 NP431_12405 PF00890 FAD binding domain NP431_12405 PF02910 Fumarate reductase flavoprotein C-term NP431_12415 PF03937 Flavinator of succinate dehydrogenase NP431_12420 PF01571 Aminomethyltransferase folate-binding domain NP431_12435 PF01494 FAD binding domain NP431_12440 PF01494 FAD binding domain NP431_12445 PF03695 Uncharacterised protein family (UPF0149) NP431_12450 PF05164 Cell division protein ZapA NP431_12460 PF01812 5-formyltetrahydrofolate cyclo-ligase family NP431_12465 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) NP431_12470 PF01842 ACT domain NP431_12470 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NP431_12470 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NP431_12475 PF04402 Protein of unknown function (DUF541) NP431_12480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_12480 PF03466 LysR substrate binding domain NP431_12485 PF01810 LysE type translocator NP431_12490 PF00924 Mechanosensitive ion channel NP431_12490 PF05552 Conserved TM helix NP431_12495 PF01116 Fructose-bisphosphate aldolase class-II NP431_12500 PF00162 Phosphoglycerate kinase NP431_12505 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NP431_12505 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NP431_12510 PF02779 Transketolase, pyrimidine binding domain NP431_12510 PF02780 Transketolase, C-terminal domain NP431_12510 PF00456 Transketolase, thiamine diphosphate binding domain NP431_12515 PF02773 S-adenosylmethionine synthetase, C-terminal domain NP431_12515 PF02772 S-adenosylmethionine synthetase, central domain NP431_12515 PF00438 S-adenosylmethionine synthetase, N-terminal domain NP431_12525 PF10263 SprT-like family NP431_12525 PF17283 SprT-like zinc ribbon domain NP431_12530 PF04231 Endonuclease I NP431_12535 PF04452 RNA methyltransferase NP431_12540 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain NP431_12540 PF02951 Prokaryotic glutathione synthetase, N-terminal domain NP431_12545 PF02622 Uncharacterized ACR, COG1678 NP431_12550 PF03652 Holliday junction resolvase NP431_12555 PF00437 Type II/IV secretion system protein NP431_12560 PF00437 Type II/IV secretion system protein NP431_12565 PF01168 Alanine racemase, N-terminal domain NP431_12570 PF03807 NADP oxidoreductase coenzyme F420-dependent NP431_12570 PF14748 Pyrroline-5-carboxylate reductase dimerisation NP431_12575 PF02325 YGGT family NP431_12580 PF02594 Uncharacterised ACR, YggU family COG1872 NP431_12590 PF01725 Ham1 family NP431_12595 PF06969 HemN C-terminal domain NP431_12595 PF04055 Radical SAM superfamily NP431_12600 PF04960 Glutaminase NP431_12605 PF02086 D12 class N6 adenine-specific DNA methyltransferase NP431_12610 PF02390 Putative methyltransferase NP431_12615 PF00633 Helix-hairpin-helix motif NP431_12615 PF00730 HhH-GPD superfamily base excision DNA repair protein NP431_12615 PF14815 NUDIX domain NP431_12620 PF04362 Bacterial Fe(2+) trafficking NP431_12625 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain NP431_12625 PF01464 Transglycosylase SLT domain NP431_12665 PF00672 HAMP domain NP431_12665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP431_12665 PF17200 Single Cache domain 2 NP431_12740 PF00106 short chain dehydrogenase NP431_12745 PF01758 Sodium Bile acid symporter family NP431_12755 PF00106 short chain dehydrogenase NP431_12760 PF10011 Predicted membrane protein (DUF2254) NP431_12770 PF03739 Lipopolysaccharide export system permease LptF/LptG NP431_12775 PF03739 Lipopolysaccharide export system permease LptF/LptG NP431_12780 PF02789 Cytosol aminopeptidase family, N-terminal domain NP431_12780 PF00883 Cytosol aminopeptidase family, catalytic domain NP431_12785 PF04364 DNA polymerase III chi subunit, HolC NP431_12790 PF10458 Valyl tRNA synthetase tRNA binding arm NP431_12790 PF00133 tRNA synthetases class I (I, L, M and V) NP431_12790 PF08264 Anticodon-binding domain of tRNA NP431_12800 PF00583 Acetyltransferase (GNAT) family NP431_12810 PF06877 Regulator of ribonuclease activity B NP431_12820 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NP431_12820 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NP431_12825 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NP431_12825 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NP431_12830 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain NP431_12830 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain NP431_12835 PF01042 Endoribonuclease L-PSP NP431_12840 PF01553 Acyltransferase NP431_12845 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NP431_12850 PF01722 BolA-like protein NP431_12860 PF05494 MlaC protein NP431_12865 PF02470 MlaD protein NP431_12870 PF02405 Permease MlaE NP431_12875 PF00005 ABC transporter NP431_12880 PF01699 Sodium/calcium exchanger protein NP431_12885 PF01380 SIS domain NP431_12885 PF00571 CBS domain NP431_12895 PF03968 OstA-like protein NP431_12900 PF12399 Branched-chain amino acid ATP-binding cassette transporter NP431_12900 PF00005 ABC transporter NP431_12905 PF00309 Sigma-54 factor, Activator interacting domain (AID) NP431_12905 PF04552 Sigma-54, DNA binding domain NP431_12905 PF04963 Sigma-54 factor, core binding domain NP431_12910 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NP431_12915 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NP431_12920 PF03668 P-loop ATPase protein family NP431_12925 PF00381 PTS HPr component phosphorylation site NP431_12930 PF01769 Divalent cation transporter NP431_12930 PF00571 CBS domain NP431_12930 PF03448 MgtE intracellular N domain NP431_12935 PF01523 Putative modulator of DNA gyrase NP431_12940 PF04751 Protein of unknown function (DUF615) NP431_12945 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NP431_12945 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NP431_12950 PF00849 RNA pseudouridylate synthase NP431_12960 PF18339 RapA N-terminal Tudor like domain 1 NP431_12960 PF00271 Helicase conserved C-terminal domain NP431_12960 PF12137 RNA polymerase recycling family C-terminal NP431_12960 PF00176 SNF2 family N-terminal domain NP431_12960 PF18337 RapA N-terminal Tudor like domain NP431_12965 PF13638 PIN domain NP431_12965 PF02562 PhoH-like protein NP431_12970 PF01523 Putative modulator of DNA gyrase NP431_12975 PF00795 Carbon-nitrogen hydrolase NP431_12980 PF13502 AsmA-like C-terminal region NP431_12980 PF13116 Protein of unknown function NP431_12985 PF10150 Ribonuclease E/G family NP431_12985 PF00575 S1 RNA binding domain NP431_12990 PF02545 Maf-like protein NP431_12995 PF04093 rod shape-determining protein MreD NP431_13000 PF04085 rod shape-determining protein MreC NP431_13040 PF07963 Prokaryotic N-terminal methylation motif NP431_13050 PF00482 Type II secretion system (T2SS), protein F NP431_13055 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NP431_13055 PF00437 Type II/IV secretion system protein NP431_13065 PF13401 AAA domain NP431_13065 PF01471 Putative peptidoglycan binding domain NP431_13070 PF11741 AMIN domain NP431_13070 PF00263 Bacterial type II and III secretion system protein NP431_13070 PF03958 Bacterial type II/III secretion system short domain NP431_13070 PF07660 Secretin and TonB N terminus short domain NP431_13090 PF00563 EAL domain NP431_13090 PF17157 Gammaproteobacterial periplasmic sensor domain NP431_13090 PF00990 Diguanylate cyclase, GGDEF domain NP431_13095 PF00436 Single-strand binding protein family NP431_13100 PF00196 Bacterial regulatory proteins, luxR family NP431_13105 PF00483 Nucleotidyl transferase NP431_13110 PF00005 ABC transporter NP431_13110 PF17755 UvrA DNA-binding domain NP431_13110 PF17760 UvrA interaction domain NP431_13120 PF00266 Aminotransferase class-V NP431_13125 PF00696 Amino acid kinase family NP431_13125 PF01842 ACT domain NP431_13130 PF00809 Pterin binding enzyme NP431_13130 PF02965 Vitamin B12 dependent methionine synthase, activation domain NP431_13130 PF02574 Homocysteine S-methyltransferase NP431_13130 PF02310 B12 binding domain NP431_13130 PF02607 B12 binding domain NP431_13135 PF00999 Sodium/hydrogen exchanger family NP431_13190 PF01507 Phosphoadenosine phosphosulfate reductase family NP431_13195 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NP431_13195 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NP431_13200 PF00667 FAD binding domain NP431_13200 PF00258 Flavodoxin NP431_13200 PF00175 Oxidoreductase NAD-binding domain NP431_13220 PF01207 Dihydrouridine synthase (Dus) NP431_13225 PF01475 Ferric uptake regulator family NP431_13235 PF00342 Phosphoglucose isomerase NP431_13240 PF01894 Uncharacterised protein family UPF0047 NP431_13245 PF00842 Alanine racemase, C-terminal domain NP431_13245 PF01168 Alanine racemase, N-terminal domain NP431_13250 PF00772 DnaB-like helicase N terminal domain NP431_13250 PF03796 DnaB-like helicase C terminal domain NP431_13260 PF03948 Ribosomal protein L9, C-terminal domain NP431_13260 PF01281 Ribosomal protein L9, N-terminal domain NP431_13265 PF01084 Ribosomal protein S18 NP431_13270 PF00436 Single-strand binding protein family NP431_13275 PF01250 Ribosomal protein S6 NP431_13280 PF00834 Ribulose-phosphate 3 epimerase family NP431_13285 PF02086 D12 class N6 adenine-specific DNA methyltransferase NP431_13295 PF01761 3-dehydroquinate synthase NP431_13300 PF01202 Shikimate kinase NP431_13305 PF07660 Secretin and TonB N terminus short domain NP431_13305 PF03958 Bacterial type II/III secretion system short domain NP431_13305 PF00263 Bacterial type II and III secretion system protein NP431_13305 PF11741 AMIN domain NP431_13320 PF05137 Fimbrial assembly protein (PilN) NP431_13330 PF17092 Penicillin-binding protein OB-like domain NP431_13330 PF00912 Transglycosylase NP431_13330 PF00905 Penicillin binding protein transpeptidase domain NP431_13335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_13335 PF03466 LysR substrate binding domain NP431_13340 PF08534 Redoxin NP431_13340 PF00462 Glutaredoxin NP431_13345 PF00206 Lyase NP431_13345 PF00583 Acetyltransferase (GNAT) family NP431_13345 PF14698 Argininosuccinate lyase C-terminal NP431_13350 PF00764 Arginosuccinate synthase NP431_13355 PF00696 Amino acid kinase family NP431_13360 PF01118 Semialdehyde dehydrogenase, NAD binding domain NP431_13360 PF02774 Semialdehyde dehydrogenase, dimerisation domain NP431_13365 PF07687 Peptidase dimerisation domain NP431_13365 PF01546 Peptidase family M20/M25/M40 NP431_13370 PF00311 Phosphoenolpyruvate carboxylase NP431_13380 PF02219 Methylenetetrahydrofolate reductase NP431_13385 PF00696 Amino acid kinase family NP431_13385 PF00742 Homoserine dehydrogenase NP431_13385 PF03447 Homoserine dehydrogenase, NAD binding domain NP431_13390 PF01053 Cys/Met metabolism PLP-dependent enzyme NP431_13395 PF01340 Met Apo-repressor, MetJ NP431_13400 PF00390 Malic enzyme, N-terminal domain NP431_13400 PF03949 Malic enzyme, NAD binding domain NP431_13405 PF00210 Ferritin-like domain NP431_13410 PF04324 BFD-like [2Fe-2S] binding domain NP431_13415 PF03144 Elongation factor Tu domain 2 NP431_13415 PF03143 Elongation factor Tu C-terminal domain NP431_13415 PF00009 Elongation factor Tu GTP binding domain NP431_13420 PF00679 Elongation factor G C-terminus NP431_13420 PF14492 Elongation Factor G, domain II NP431_13420 PF03764 Elongation factor G, domain IV NP431_13420 PF00009 Elongation factor Tu GTP binding domain NP431_13420 PF03144 Elongation factor Tu domain 2 NP431_13425 PF00177 Ribosomal protein S7p/S5e NP431_13430 PF00164 Ribosomal protein S12/S23 NP431_13435 PF04077 DsrH like protein NP431_13440 PF02635 DsrE/DsrF-like family NP431_13445 PF02635 DsrE/DsrF-like family NP431_13450 PF13309 HTH domain NP431_13450 PF08348 YheO-like PAS domain NP431_13455 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NP431_13455 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NP431_13465 PF04102 SlyX NP431_13470 PF01112 Asparaginase NP431_13475 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NP431_13485 PF00999 Sodium/hydrogen exchanger family NP431_13485 PF02254 TrkA-N domain NP431_13490 PF02525 Flavodoxin-like fold NP431_13495 PF00005 ABC transporter NP431_13495 PF12848 ABC transporter NP431_13505 PF00561 alpha/beta hydrolase fold NP431_13510 PF06794 Uncharacterised protein family (UPF0270) NP431_13515 PF00485 Phosphoribulokinase / Uridine kinase family NP431_13520 PF00027 Cyclic nucleotide-binding domain NP431_13520 PF13545 Crp-like helix-turn-helix domain NP431_13530 PF00171 Aldehyde dehydrogenase family NP431_13535 PF04958 Arginine N-succinyltransferase beta subunit NP431_13540 PF00202 Aminotransferase class-III NP431_13545 PF00117 Glutamine amidotransferase class-I NP431_13550 PF00579 tRNA synthetases class I (W and Y) NP431_13555 PF13419 Haloacid dehalogenase-like hydrolase NP431_13560 PF00588 SpoU rRNA Methylase family NP431_13560 PF08032 RNA 2'-O ribose methyltransferase substrate binding NP431_13565 PF17876 Cold shock domain NP431_13565 PF08461 Ribonuclease R winged-helix domain NP431_13565 PF08206 Ribonuclease B OB domain NP431_13565 PF00773 RNB domain NP431_13565 PF00575 S1 RNA binding domain NP431_13570 PF02082 Transcriptional regulator NP431_13575 PF00970 Oxidoreductase FAD-binding domain NP431_13575 PF00042 Globin NP431_13575 PF00175 Oxidoreductase NAD-binding domain NP431_13580 PF08238 Sel1 repeat NP431_13585 PF00709 Adenylosuccinate synthetase NP431_13590 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) NP431_13595 PF01145 SPFH domain / Band 7 family NP431_13600 PF01145 SPFH domain / Band 7 family NP431_13600 PF12221 Bacterial membrane protein N terminal NP431_13605 PF16360 GTP-binding GTPase Middle Region NP431_13605 PF13167 GTP-binding GTPase N-terminal NP431_13605 PF01926 50S ribosome-binding GTPase NP431_13610 PF17209 Hfq protein NP431_13620 PF01119 DNA mismatch repair protein, C-terminal domain NP431_13620 PF08676 MutL C terminal dimerisation domain NP431_13625 PF01520 N-acetylmuramoyl-L-alanine amidase NP431_13630 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NP431_13635 PF08331 Domain of unknown function (DUF1730) NP431_13700 PF00929 Exonuclease NP431_13705 PF03193 RsgA GTPase NP431_13710 PF02666 Phosphatidylserine decarboxylase NP431_13715 PF00939 Sodium:sulfate symporter transmembrane region NP431_13725 PF01676 Metalloenzyme superfamily NP431_13725 PF06415 BPG-independent PGAM N-terminus (iPGM_N) NP431_13730 PF00581 Rhodanese-like domain NP431_13735 PF02556 Preprotein translocase subunit SecB NP431_13740 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NP431_13740 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NP431_13745 PF00132 Bacterial transferase hexapeptide (six repeats) NP431_13745 PF06426 Serine acetyltransferase, N-terminal NP431_13750 PF01551 Peptidase family M23 NP431_13760 PF08360 QacR-like protein, C-terminal region NP431_13760 PF00440 Bacterial regulatory proteins, tetR family NP431_13770 PF00152 tRNA synthetases class II (D, K and N) NP431_13775 PF00890 FAD binding domain NP431_13775 PF02910 Fumarate reductase flavoprotein C-term NP431_13780 PF13085 2Fe-2S iron-sulfur cluster binding domain NP431_13780 PF13183 4Fe-4S dicluster domain NP431_13785 PF02300 Fumarate reductase subunit C NP431_13790 PF02313 Fumarate reductase subunit D NP431_13800 PF09285 Elongation factor P, C-terminal NP431_13800 PF08207 Elongation factor P (EF-P) KOW-like domain NP431_13800 PF01132 Elongation factor P (EF-P) OB domain NP431_13805 PF04055 Radical SAM superfamily NP431_13810 PF02308 MgtC family NP431_13825 PF00239 Resolvase, N terminal domain NP431_13825 PF02796 Helix-turn-helix domain of resolvase NP431_13835 PF00118 TCP-1/cpn60 chaperonin family NP431_13840 PF00166 Chaperonin 10 Kd subunit NP431_13845 PF01554 MatE NP431_13850 PF00365 Phosphofructokinase NP431_13855 PF01545 Cation efflux family NP431_13855 PF16916 Dimerisation domain of Zinc Transporter NP431_13860 PF07813 LTXXQ motif family protein NP431_13865 PF00072 Response regulator receiver domain NP431_13865 PF00486 Transcriptional regulatory protein, C terminal NP431_13870 PF16527 Two-component sensor protein CpxA, periplasmic domain NP431_13870 PF00512 His Kinase A (phospho-acceptor) domain NP431_13870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP431_13870 PF00672 HAMP domain NP431_13875 PF00588 SpoU rRNA Methylase family NP431_13880 PF04186 FxsA cytoplasmic membrane protein NP431_13885 PF00206 Lyase NP431_13885 PF10415 Fumarase C C-terminus NP431_13890 PF03605 Anaerobic c4-dicarboxylate membrane transporter NP431_13895 PF11412 Disulphide bond corrector protein DsbC NP431_13895 PF02683 Cytochrome C biogenesis protein transmembrane region NP431_13900 PF00196 Bacterial regulatory proteins, luxR family NP431_13900 PF00072 Response regulator receiver domain NP431_13905 PF03471 Transporter associated domain NP431_13905 PF02080 TrkA-C domain NP431_13905 PF00999 Sodium/hydrogen exchanger family NP431_13915 PF00474 Sodium:solute symporter family NP431_13925 PF10415 Fumarase C C-terminus NP431_13925 PF00206 Lyase NP431_13930 PF00672 HAMP domain NP431_13930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP431_13930 PF00512 His Kinase A (phospho-acceptor) domain NP431_13930 PF01627 Hpt domain NP431_13930 PF00072 Response regulator receiver domain NP431_13935 PF12832 MFS_1 like family NP431_13950 PF16177 Acetyl-coenzyme A synthetase N-terminus NP431_13950 PF13193 AMP-binding enzyme C-terminal domain NP431_13950 PF00501 AMP-binding enzyme NP431_13955 PF01220 Dehydroquinase class II NP431_13960 PF00364 Biotin-requiring enzyme NP431_13965 PF00289 Biotin carboxylase, N-terminal domain NP431_13965 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NP431_13965 PF02785 Biotin carboxylase C-terminal domain NP431_13975 PF01207 Dihydrouridine synthase (Dus) NP431_13980 PF02954 Bacterial regulatory protein, Fis family NP431_14060 PF00486 Transcriptional regulatory protein, C terminal NP431_14060 PF18500 CadC C-terminal domain 1 NP431_14065 PF13411 MerR HTH family regulatory protein NP431_14070 PF02142 MGS-like domain NP431_14070 PF01808 AICARFT/IMPCHase bienzyme NP431_14075 PF02844 Phosphoribosylglycinamide synthetase, N domain NP431_14075 PF02843 Phosphoribosylglycinamide synthetase, C domain NP431_14075 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NP431_14085 PF00216 Bacterial DNA-binding protein NP431_14090 PF00571 CBS domain NP431_14090 PF01595 Cyclin M transmembrane N-terminal domain NP431_14095 PF04222 Protein of unknown function (DUF416) NP431_14100 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NP431_14105 PF03167 Uracil DNA glycosylase superfamily NP431_14110 PF01208 Uroporphyrinogen decarboxylase (URO-D) NP431_14115 PF00293 NUDIX domain NP431_14115 PF09297 NADH pyrophosphatase zinc ribbon domain NP431_14120 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ NP431_14125 PF04998 RNA polymerase Rpb1, domain 5 NP431_14125 PF05000 RNA polymerase Rpb1, domain 4 NP431_14125 PF04983 RNA polymerase Rpb1, domain 3 NP431_14125 PF04997 RNA polymerase Rpb1, domain 1 NP431_14125 PF00623 RNA polymerase Rpb1, domain 2 NP431_14130 PF04563 RNA polymerase beta subunit NP431_14130 PF04561 RNA polymerase Rpb2, domain 2 NP431_14130 PF04565 RNA polymerase Rpb2, domain 3 NP431_14130 PF10385 RNA polymerase beta subunit external 1 domain NP431_14130 PF00562 RNA polymerase Rpb2, domain 6 NP431_14130 PF04560 RNA polymerase Rpb2, domain 7 NP431_14135 PF00542 Ribosomal protein L7/L12 C-terminal domain NP431_14135 PF16320 Ribosomal protein L7/L12 dimerisation domain NP431_14140 PF00466 Ribosomal protein L10 NP431_14145 PF00687 Ribosomal protein L1p/L10e family NP431_14150 PF03946 Ribosomal protein L11, N-terminal domain NP431_14150 PF00298 Ribosomal protein L11, RNA binding domain NP431_14155 PF02357 Transcription termination factor nusG NP431_14155 PF00467 KOW motif NP431_14160 PF00584 SecE/Sec61-gamma subunits of protein translocation complex NP431_14165 PF00009 Elongation factor Tu GTP binding domain NP431_14165 PF03144 Elongation factor Tu domain 2 NP431_14165 PF03143 Elongation factor Tu C-terminal domain NP431_14190 PF00485 Phosphoribulokinase / Uridine kinase family NP431_14195 PF02237 Biotin protein ligase C terminal domain NP431_14195 PF03099 Biotin/lipoate A/B protein ligase family NP431_14195 PF08279 HTH domain NP431_14200 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NP431_14200 PF01565 FAD binding domain NP431_14210 PF13091 PLD-like domain NP431_14275 PF01177 Asp/Glu/Hydantoin racemase NP431_14285 PF07715 TonB-dependent Receptor Plug Domain NP431_14285 PF00593 TonB dependent receptor NP431_14290 PF05958 tRNA (Uracil-5-)-methyltransferase NP431_14300 PF00440 Bacterial regulatory proteins, tetR family NP431_14305 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP431_14305 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NP431_14310 PF01554 MatE NP431_14315 PF04072 Leucine carboxyl methyltransferase NP431_14320 PF01726 LexA DNA binding domain NP431_14320 PF00717 Peptidase S24-like NP431_14325 PF01553 Acyltransferase NP431_14330 PF01040 UbiA prenyltransferase family NP431_14335 PF04345 Chorismate lyase NP431_14340 PF03748 Flagellar basal body-associated protein FliL NP431_14345 PF01694 Rhomboid family NP431_14345 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease NP431_14350 PF00581 Rhodanese-like domain NP431_14355 PF00140 Sigma-70 factor, region 1.2 NP431_14355 PF04542 Sigma-70 region 2 NP431_14355 PF04545 Sigma-70, region 4 NP431_14360 PF18075 FtsX extracellular domain NP431_14365 PF00005 ABC transporter NP431_14370 PF00448 SRP54-type protein, GTPase domain NP431_14370 PF02881 SRP54-type protein, helical bundle domain NP431_14420 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NP431_14420 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NP431_14425 PF01022 Bacterial regulatory protein, arsR family NP431_14430 PF08668 HDOD domain NP431_14430 PF00563 EAL domain NP431_14435 PF01810 LysE type translocator NP431_14440 PF12146 Serine aminopeptidase, S33 NP431_14460 PF03942 DTW domain NP431_14465 PF13419 Haloacid dehalogenase-like hydrolase NP431_14470 PF02899 Phage integrase, N-terminal SAM-like domain NP431_14470 PF00589 Phage integrase family NP431_14480 PF01678 Diaminopimelate epimerase NP431_14485 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NP431_14485 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NP431_14495 PF01491 Frataxin-like domain NP431_14500 PF01295 Adenylate cyclase, class-I NP431_14500 PF12633 Adenylate cyclase NT domain NP431_14505 PF03900 Porphobilinogen deaminase, C-terminal domain NP431_14505 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NP431_14510 PF02602 Uroporphyrinogen-III synthase HemD NP431_14515 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase NP431_14520 PF07219 HemY protein N-terminus NP431_14560 PF00175 Oxidoreductase NAD-binding domain NP431_14570 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase NP431_14580 PF07498 Rho termination factor, N-terminal domain NP431_14580 PF07497 Rho termination factor, RNA-binding domain NP431_14580 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NP431_14585 PF00085 Thioredoxin NP431_14590 PF00270 DEAD/DEAH box helicase NP431_14590 PF00271 Helicase conserved C-terminal domain NP431_14595 PF02541 Ppx/GppA phosphatase family NP431_14600 PF02592 Putative vitamin uptake transporter NP431_14610 PF09382 RQC domain NP431_14610 PF00270 DEAD/DEAH box helicase NP431_14610 PF00271 Helicase conserved C-terminal domain NP431_14610 PF00570 HRDC domain NP431_14610 PF16124 RecQ zinc-binding NP431_14615 PF00892 EamA-like transporter family NP431_14625 PF01810 LysE type translocator NP431_14635 PF13361 UvrD-like helicase C-terminal domain NP431_14635 PF00580 UvrD/REP helicase N-terminal domain NP431_14645 PF05114 Protein of unknown function (DUF692) NP431_14665 PF07690 Major Facilitator Superfamily NP431_14670 PF03466 LysR substrate binding domain NP431_14670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_14675 PF00557 Metallopeptidase family M24 NP431_14675 PF01321 Creatinase/Prolidase N-terminal domain NP431_14675 PF01321 Creatinase/Prolidase N-terminal domain NP431_14675 PF00557 Metallopeptidase family M24 NP431_14680 PF06968 Biotin and Thiamin Synthesis associated domain NP431_14680 PF04055 Radical SAM superfamily NP431_14685 PF05690 Thiazole biosynthesis protein ThiG NP431_14690 PF02597 ThiS family NP431_14695 PF00899 ThiF family NP431_14700 PF02581 Thiamine monophosphate synthase NP431_14705 PF01964 Radical SAM ThiC family NP431_14705 PF13667 ThiC-associated domain NP431_14710 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NP431_14715 PF07732 Multicopper oxidase NP431_14715 PF00394 Multicopper oxidase NP431_14715 PF07731 Multicopper oxidase NP431_14765 PF00132 Bacterial transferase hexapeptide (six repeats) NP431_14775 PF01488 Shikimate / quinate 5-dehydrogenase NP431_14775 PF08501 Shikimate dehydrogenase substrate binding domain NP431_14775 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NP431_14780 PF01218 Coproporphyrinogen III oxidase NP431_14785 PF01300 Telomere recombination NP431_14790 PF00731 AIR carboxylase NP431_14795 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain NP431_14795 PF02222 ATP-grasp domain NP431_14800 PF01396 Topoisomerase DNA binding C4 zinc finger NP431_14805 PF04361 Protein of unknown function (DUF494) NP431_14810 PF02481 DNA recombination-mediator protein A NP431_14810 PF17782 DprA winged helix domain NP431_14820 PF01327 Polypeptide deformylase NP431_14825 PF02911 Formyl transferase, C-terminal domain NP431_14825 PF00551 Formyl transferase NP431_14830 PF01189 16S rRNA methyltransferase RsmB/F NP431_14830 PF01029 NusB family NP431_14835 PF02254 TrkA-N domain NP431_14835 PF02080 TrkA-C domain NP431_14840 PF02386 Cation transport protein NP431_14850 PF03006 Haemolysin-III related NP431_14855 PF07070 SpoOM protein NP431_14865 PF06288 Protein of unknown function (DUF1040) NP431_14870 PF13746 4Fe-4S dicluster domain NP431_14870 PF12801 4Fe-4S binding domain NP431_14870 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase NP431_14875 PF01636 Phosphotransferase enzyme family NP431_14880 PF01323 DSBA-like thioredoxin domain NP431_14885 PF01553 Acyltransferase NP431_14895 PF01078 Magnesium chelatase, subunit ChlI NP431_14895 PF13335 Magnesium chelatase, subunit ChlI C-terminal NP431_14900 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NP431_14900 PF00205 Thiamine pyrophosphate enzyme, central domain NP431_14900 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NP431_14910 PF00920 Dehydratase family NP431_14915 PF00291 Pyridoxal-phosphate dependent enzyme NP431_14915 PF00585 C-terminal regulatory domain of Threonine dehydratase NP431_14920 PF03466 LysR substrate binding domain NP431_14920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_14925 PF07690 Major Facilitator Superfamily NP431_14930 PF00497 Bacterial extracellular solute-binding proteins, family 3 NP431_14935 PF00528 Binding-protein-dependent transport system inner membrane component NP431_14940 PF00132 Bacterial transferase hexapeptide (six repeats) NP431_14940 PF12804 MobA-like NTP transferase domain NP431_14945 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain NP431_14945 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NP431_14950 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NP431_14950 PF02874 ATP synthase alpha/beta family, beta-barrel domain NP431_14955 PF00231 ATP synthase NP431_14960 PF02874 ATP synthase alpha/beta family, beta-barrel domain NP431_14960 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NP431_14960 PF00306 ATP synthase alpha/beta chain, C terminal domain NP431_14965 PF00213 ATP synthase delta (OSCP) subunit NP431_14970 PF00430 ATP synthase B/B' CF(0) NP431_14975 PF00137 ATP synthase subunit C NP431_14980 PF00119 ATP synthase A chain NP431_14985 PF03899 ATP synthase I chain NP431_14990 PF02195 ParB-like nuclease domain NP431_14990 PF17762 HTH domain found in ParB protein NP431_14995 PF13614 AAA domain NP431_15000 PF02527 rRNA small subunit methyltransferase G NP431_15005 PF01134 Glucose inhibited division protein A NP431_15005 PF13932 GidA associated domain NP431_15010 PF00258 Flavodoxin NP431_15015 PF12631 MnmE helical domain NP431_15015 PF10396 GTP-binding protein TrmE N-terminus NP431_15015 PF01926 50S ribosome-binding GTPase NP431_15020 PF14849 YidC periplasmic domain NP431_15020 PF02096 60Kd inner membrane protein NP431_15025 PF01809 Putative membrane protein insertion efficiency factor NP431_15030 PF00825 Ribonuclease P NP431_15035 PF00468 Ribosomal protein L34 NP431_15040 PF00005 ABC transporter NP431_15045 PF00528 Binding-protein-dependent transport system inner membrane component NP431_15050 PF00497 Bacterial extracellular solute-binding proteins, family 3 NP431_15055 PF00313 'Cold-shock' DNA-binding domain NP431_15060 PF02678 Pirin NP431_15060 PF05726 Pirin C-terminal cupin domain NP431_15065 PF01734 Patatin-like phospholipase NP431_15075 PF01047 MarR family NP431_15080 PF03733 Inner membrane component domain NP431_15085 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NP431_15090 PF08019 Phosphoethanolamine transferase EptA/EptB NP431_15090 PF00884 Sulfatase NP431_15095 PF01219 Prokaryotic diacylglycerol kinase NP431_15110 PF01323 DSBA-like thioredoxin domain NP431_15120 PF00255 Glutathione peroxidase NP431_15125 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NP431_15145 PF01966 HD domain NP431_15150 PF00571 CBS domain NP431_15150 PF01769 Divalent cation transporter NP431_15150 PF03448 MgtE intracellular N domain NP431_15155 PF03109 ABC1 family NP431_15165 PF00392 Bacterial regulatory proteins, gntR family NP431_15165 PF00155 Aminotransferase class I and II NP431_15170 PF13520 Amino acid permease NP431_15175 PF13404 AsnC-type helix-turn-helix domain NP431_15175 PF01037 Lrp/AsnC ligand binding domain NP431_15180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_15180 PF03466 LysR substrate binding domain NP431_15195 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NP431_15195 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NP431_15200 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NP431_15205 PF01554 MatE NP431_15210 PF04363 Protein of unknown function (DUF496) NP431_15220 PF04337 Protein of unknown function, DUF480 NP431_15225 PF01541 GIY-YIG catalytic domain NP431_15235 PF00072 Response regulator receiver domain NP431_15235 PF00512 His Kinase A (phospho-acceptor) domain NP431_15235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP431_15235 PF09308 LuxQ, periplasmic NP431_15245 PF00529 HlyD membrane-fusion protein of T1SS NP431_15245 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NP431_15265 PF01037 Lrp/AsnC ligand binding domain NP431_15285 PF13721 SecD export protein N-terminal TM region NP431_15285 PF02355 Protein export membrane protein NP431_15285 PF07549 SecD/SecF GG Motif NP431_15290 PF02355 Protein export membrane protein NP431_15290 PF07549 SecD/SecF GG Motif NP431_15295 PF01810 LysE type translocator NP431_15300 PF00106 short chain dehydrogenase NP431_15305 PF00108 Thiolase, N-terminal domain NP431_15305 PF02803 Thiolase, C-terminal domain NP431_15315 PF00561 alpha/beta hydrolase fold NP431_15315 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus NP431_15325 PF03264 NapC/NirT cytochrome c family, N-terminal region NP431_15330 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) NP431_15335 PF01568 Molydopterin dinucleotide binding domain NP431_15335 PF00384 Molybdopterin oxidoreductase NP431_15335 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NP431_15345 PF12838 4Fe-4S dicluster domain NP431_15345 PF13187 4Fe-4S dicluster domain NP431_15350 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term NP431_15350 PF07730 Histidine kinase NP431_15350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP431_15350 PF00672 HAMP domain NP431_15355 PF00196 Bacterial regulatory proteins, luxR family NP431_15355 PF00072 Response regulator receiver domain NP431_15370 PF07687 Peptidase dimerisation domain NP431_15370 PF01546 Peptidase family M20/M25/M40 NP431_15375 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NP431_15380 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NP431_15385 PF00873 AcrB/AcrD/AcrF family NP431_15390 PF00672 HAMP domain NP431_15390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP431_15390 PF12729 Four helix bundle sensory module for signal transduction NP431_15395 PF00472 RF-1 domain NP431_15400 PF13419 Haloacid dehalogenase-like hydrolase NP431_15405 PF00691 OmpA family NP431_15405 PF01389 OmpA-like transmembrane domain NP431_15410 PF00793 DAHP synthetase I family NP431_15415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP431_15415 PF08447 PAS fold NP431_15420 PF02780 Transketolase, C-terminal domain NP431_15420 PF02779 Transketolase, pyrimidine binding domain NP431_15420 PF00456 Transketolase, thiamine diphosphate binding domain NP431_15425 PF00923 Transaldolase/Fructose-6-phosphate aldolase NP431_15435 PF16868 NMT1-like family NP431_15445 PF00581 Rhodanese-like domain NP431_15455 PF00899 ThiF family NP431_15460 PF00994 Probable molybdopterin binding domain NP431_15460 PF03453 MoeA N-terminal region (domain I and II) NP431_15460 PF03454 MoeA C-terminal region (domain IV) NP431_15465 PF01227 GTP cyclohydrolase I NP431_15475 PF00654 Voltage gated chloride channel NP431_15490 PF00248 Aldo/keto reductase family NP431_15495 PF03853 YjeF-related protein N-terminus NP431_15495 PF01256 Carbohydrate kinase NP431_15500 PF00478 IMP dehydrogenase / GMP reductase domain NP431_15510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_15510 PF03466 LysR substrate binding domain NP431_15515 PF12146 Serine aminopeptidase, S33 NP431_15535 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NP431_15540 PF06772 Bacterial low temperature requirement A protein (LtrA) NP431_15545 PF12146 Serine aminopeptidase, S33 NP431_15550 PF12146 Serine aminopeptidase, S33 NP431_15560 PF06719 AraC-type transcriptional regulator N-terminus NP431_15560 PF12833 Helix-turn-helix domain NP431_15565 PF09339 IclR helix-turn-helix domain NP431_15565 PF01614 Bacterial transcriptional regulator NP431_15570 PF12146 Serine aminopeptidase, S33 NP431_15575 PF02803 Thiolase, C-terminal domain NP431_15575 PF00108 Thiolase, N-terminal domain NP431_15580 PF01144 Coenzyme A transferase NP431_15585 PF01144 Coenzyme A transferase NP431_15590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_15590 PF03466 LysR substrate binding domain NP431_15595 PF13378 Enolase C-terminal domain-like NP431_15595 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NP431_15600 PF02426 Muconolactone delta-isomerase NP431_15605 PF00775 Dioxygenase NP431_15605 PF04444 Catechol dioxygenase N terminus NP431_15610 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NP431_15610 PF00355 Rieske [2Fe-2S] domain NP431_15615 PF00866 Ring hydroxylating beta subunit NP431_15620 PF00175 Oxidoreductase NAD-binding domain NP431_15620 PF00111 2Fe-2S iron-sulfur cluster binding domain NP431_15620 PF00970 Oxidoreductase FAD-binding domain NP431_15625 PF00106 short chain dehydrogenase NP431_15630 PF07690 Major Facilitator Superfamily NP431_15635 PF03466 LysR substrate binding domain NP431_15635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_15640 PF01546 Peptidase family M20/M25/M40 NP431_15640 PF07687 Peptidase dimerisation domain NP431_15645 PF03606 C4-dicarboxylate anaerobic carrier NP431_15655 PF02423 Ornithine cyclodeaminase/mu-crystallin family NP431_15660 PF03553 Na+/H+ antiporter family NP431_15670 PF07722 Peptidase C26 NP431_15675 PF12833 Helix-turn-helix domain NP431_15675 PF10114 Sensory domain found in PocR NP431_15685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_15685 PF03466 LysR substrate binding domain NP431_15690 PF01266 FAD dependent oxidoreductase NP431_15695 PF08943 CsiD NP431_15710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_15710 PF03466 LysR substrate binding domain NP431_15720 PF00912 Transglycosylase NP431_15720 PF00905 Penicillin binding protein transpeptidase domain NP431_15720 PF14814 Bifunctional transglycosylase second domain NP431_15725 PF00248 Aldo/keto reductase family NP431_15730 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NP431_15740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_15740 PF03466 LysR substrate binding domain NP431_15745 PF03480 Bacterial extracellular solute-binding protein, family 7 NP431_15755 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NP431_15765 PF01261 Xylose isomerase-like TIM barrel NP431_15765 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NP431_15770 PF01220 Dehydroquinase class II NP431_15775 PF08501 Shikimate dehydrogenase substrate binding domain NP431_15775 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NP431_15780 PF04909 Amidohydrolase NP431_15785 PF03737 Aldolase/RraA NP431_15790 PF04303 PrpF protein NP431_15795 PF04909 Amidohydrolase NP431_15805 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NP431_15815 PF07715 TonB-dependent Receptor Plug Domain NP431_15815 PF00593 TonB dependent receptor NP431_15820 PF03466 LysR substrate binding domain NP431_15820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_15830 PF00196 Bacterial regulatory proteins, luxR family NP431_15830 PF00072 Response regulator receiver domain NP431_15835 PF01494 FAD binding domain NP431_15845 PF12706 Beta-lactamase superfamily domain NP431_15850 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NP431_15860 PF03480 Bacterial extracellular solute-binding protein, family 7 NP431_15870 PF00664 ABC transporter transmembrane region NP431_15870 PF00005 ABC transporter NP431_15880 PF00664 ABC transporter transmembrane region NP431_15880 PF00005 ABC transporter NP431_15885 PF13533 Biotin-lipoyl like NP431_15895 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NP431_15905 PF03480 Bacterial extracellular solute-binding protein, family 7 NP431_15910 PF00171 Aldehyde dehydrogenase family NP431_15910 PF01575 MaoC like domain NP431_15915 PF05138 Phenylacetic acid catabolic protein NP431_15920 PF06243 Phenylacetic acid degradation B NP431_15925 PF05138 Phenylacetic acid catabolic protein NP431_15930 PF01883 Iron-sulfur cluster assembly protein NP431_15935 PF00970 Oxidoreductase FAD-binding domain NP431_15935 PF00111 2Fe-2S iron-sulfur cluster binding domain NP431_15935 PF00175 Oxidoreductase NAD-binding domain NP431_15940 PF00378 Enoyl-CoA hydratase/isomerase NP431_15945 PF00378 Enoyl-CoA hydratase/isomerase NP431_15950 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NP431_15950 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NP431_15950 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain NP431_15955 PF03061 Thioesterase superfamily NP431_15960 PF02803 Thiolase, C-terminal domain NP431_15960 PF00108 Thiolase, N-terminal domain NP431_15965 PF00501 AMP-binding enzyme NP431_15965 PF14535 AMP-binding enzyme C-terminal domain NP431_15970 PF07848 PaaX-like protein NP431_15970 PF08223 PaaX-like protein C-terminal domain NP431_15975 PF00132 Bacterial transferase hexapeptide (six repeats) NP431_16005 PF00132 Bacterial transferase hexapeptide (six repeats) NP431_16030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_16030 PF03466 LysR substrate binding domain NP431_16035 PF00795 Carbon-nitrogen hydrolase NP431_16040 PF01979 Amidohydrolase family NP431_16045 PF00248 Aldo/keto reductase family NP431_16050 PF08220 DeoR-like helix-turn-helix domain NP431_16050 PF00455 DeoR C terminal sensor domain NP431_16055 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NP431_16055 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NP431_16060 PF17042 Nucleotide-binding C-terminal domain NP431_16060 PF07005 Sugar-binding N-terminal domain NP431_16065 PF00596 Class II Aldolase and Adducin N-terminal domain NP431_16070 PF01261 Xylose isomerase-like TIM barrel NP431_16075 PF02447 GntP family permease NP431_16080 PF00795 Carbon-nitrogen hydrolase NP431_16080 PF02540 NAD synthase NP431_16105 PF01875 Memo-like protein NP431_16120 PF00149 Calcineurin-like phosphoesterase NP431_16125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_16125 PF03466 LysR substrate binding domain NP431_16130 PF07690 Major Facilitator Superfamily NP431_16135 PF00892 EamA-like transporter family NP431_16145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP431_16145 PF00072 Response regulator receiver domain NP431_16145 PF00989 PAS fold NP431_16145 PF00497 Bacterial extracellular solute-binding proteins, family 3 NP431_16145 PF00512 His Kinase A (phospho-acceptor) domain NP431_16145 PF01627 Hpt domain NP431_16150 PF01012 Electron transfer flavoprotein domain NP431_16150 PF00766 Electron transfer flavoprotein FAD-binding domain NP431_16155 PF01012 Electron transfer flavoprotein domain NP431_16165 PF12399 Branched-chain amino acid ATP-binding cassette transporter NP431_16165 PF00005 ABC transporter NP431_16190 PF00005 ABC transporter NP431_16195 PF14535 AMP-binding enzyme C-terminal domain NP431_16195 PF00501 AMP-binding enzyme NP431_16210 PF00034 Cytochrome c NP431_16220 PF12795 Mechanosensitive ion channel porin domain NP431_16220 PF12794 Mechanosensitive ion channel inner membrane domain 1 NP431_16220 PF00924 Mechanosensitive ion channel NP431_16225 PF03060 Nitronate monooxygenase NP431_16230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_16230 PF03466 LysR substrate binding domain NP431_16235 PF00497 Bacterial extracellular solute-binding proteins, family 3 NP431_16240 PF00528 Binding-protein-dependent transport system inner membrane component NP431_16245 PF00528 Binding-protein-dependent transport system inner membrane component NP431_16255 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NP431_16255 PF13378 Enolase C-terminal domain-like NP431_16265 PF08267 Cobalamin-independent synthase, N-terminal domain NP431_16265 PF01717 Cobalamin-independent synthase, Catalytic domain NP431_16275 PF01047 MarR family NP431_16285 PF00682 HMGL-like NP431_16290 PF18140 Propionyl-coenzyme A carboxylase BT domain NP431_16290 PF00364 Biotin-requiring enzyme NP431_16290 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NP431_16290 PF02785 Biotin carboxylase C-terminal domain NP431_16290 PF00289 Biotin carboxylase, N-terminal domain NP431_16295 PF00378 Enoyl-CoA hydratase/isomerase NP431_16300 PF01039 Carboxyl transferase domain NP431_16305 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NP431_16305 PF02770 Acyl-CoA dehydrogenase, middle domain NP431_16305 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NP431_16310 PF09278 MerR, DNA binding NP431_16310 PF00376 MerR family regulatory protein NP431_16315 PF00108 Thiolase, N-terminal domain NP431_16315 PF02803 Thiolase, C-terminal domain NP431_16320 PF00171 Aldehyde dehydrogenase family NP431_16325 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NP431_16325 PF02770 Acyl-CoA dehydrogenase, middle domain NP431_16325 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NP431_16330 PF00378 Enoyl-CoA hydratase/isomerase NP431_16340 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NP431_16340 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NP431_16350 PF00440 Bacterial regulatory proteins, tetR family NP431_16350 PF13977 BetI-type transcriptional repressor, C-terminal NP431_16355 PF00171 Aldehyde dehydrogenase family NP431_16360 PF00732 GMC oxidoreductase NP431_16360 PF05199 GMC oxidoreductase NP431_16365 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NP431_16370 PF00528 Binding-protein-dependent transport system inner membrane component NP431_16375 PF00571 CBS domain NP431_16375 PF00005 ABC transporter NP431_16380 PF16200 C-terminal region of band_7 NP431_16380 PF01145 SPFH domain / Band 7 family NP431_16390 PF13188 PAS domain NP431_16390 PF03707 Bacterial signalling protein N terminal repeat NP431_16390 PF00563 EAL domain NP431_16390 PF00990 Diguanylate cyclase, GGDEF domain NP431_16410 PF04116 Fatty acid hydroxylase superfamily NP431_16415 PF00196 Bacterial regulatory proteins, luxR family NP431_16415 PF00072 Response regulator receiver domain NP431_16420 PF03793 PASTA domain NP431_16420 PF00069 Protein kinase domain NP431_16425 PF07690 Major Facilitator Superfamily NP431_16435 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NP431_16435 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP431_16435 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NP431_16435 PF18267 Rubredoxin NAD+ reductase C-terminal domain NP431_16435 PF04324 BFD-like [2Fe-2S] binding domain NP431_16440 PF10414 Sirohaem synthase dimerisation region NP431_16440 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NP431_16440 PF14824 Sirohaem biosynthesis protein central NP431_16445 PF00384 Molybdopterin oxidoreductase NP431_16445 PF04324 BFD-like [2Fe-2S] binding domain NP431_16445 PF01568 Molydopterin dinucleotide binding domain NP431_16445 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NP431_16450 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family NP431_16455 PF00148 Nitrogenase component 1 type Oxidoreductase NP431_16460 PF00148 Nitrogenase component 1 type Oxidoreductase NP431_16460 PF11844 Domain of unknown function (DUF3364) NP431_16470 PF02579 Dinitrogenase iron-molybdenum cofactor NP431_16470 PF16844 Dinitrogenase iron-molybdenum cofactor, N-terminal NP431_16480 PF00148 Nitrogenase component 1 type Oxidoreductase NP431_16485 PF00148 Nitrogenase component 1 type Oxidoreductase NP431_16490 PF02579 Dinitrogenase iron-molybdenum cofactor NP431_16495 PF12838 4Fe-4S dicluster domain NP431_16500 PF04324 BFD-like [2Fe-2S] binding domain NP431_16500 PF01106 NifU-like domain NP431_16500 PF01592 NifU-like N terminal domain NP431_16505 PF00266 Aminotransferase class-V NP431_16510 PF00682 HMGL-like NP431_16520 PF04319 NifZ domain NP431_16525 PF00639 PPIC-type PPIASE domain NP431_16535 PF00528 Binding-protein-dependent transport system inner membrane component NP431_16540 PF03459 TOBE domain NP431_16540 PF00005 ABC transporter NP431_16550 PF00892 EamA-like transporter family NP431_16560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_16560 PF03466 LysR substrate binding domain NP431_16570 PF01202 Shikimate kinase NP431_16575 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NP431_16585 PF03480 Bacterial extracellular solute-binding protein, family 7 NP431_16590 PF01810 LysE type translocator NP431_16600 PF09905 DNA-binding protein VF530 NP431_16605 PF00313 'Cold-shock' DNA-binding domain NP431_16610 PF04891 NifQ NP431_16615 PF04055 Radical SAM superfamily NP431_16615 PF02579 Dinitrogenase iron-molybdenum cofactor NP431_16620 PF00158 Sigma-54 interaction domain NP431_16620 PF02954 Bacterial regulatory protein, Fis family NP431_16620 PF13185 GAF domain NP431_16625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP431_16625 PF13426 PAS domain NP431_16625 PF00072 Response regulator receiver domain NP431_16630 PF02508 Rnf-Nqr subunit, membrane protein NP431_16635 PF04060 Putative Fe-S cluster NP431_16640 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NP431_16640 PF10531 SLBB domain NP431_16640 PF13375 RnfC Barrel sandwich hybrid domain NP431_16640 PF13237 4Fe-4S dicluster domain NP431_16645 PF03116 NQR2, RnfD, RnfE family NP431_16650 PF04205 FMN-binding domain NP431_16655 PF02508 Rnf-Nqr subunit, membrane protein NP431_16660 PF03658 RnfH family Ubiquitin NP431_16665 PF00258 Flavodoxin NP431_16680 PF02321 Outer membrane efflux protein NP431_16685 PF00873 AcrB/AcrD/AcrF family NP431_16690 PF00529 HlyD membrane-fusion protein of T1SS NP431_16690 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NP431_16695 PF07690 Major Facilitator Superfamily NP431_16700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_16700 PF03466 LysR substrate binding domain NP431_16705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_16705 PF03466 LysR substrate binding domain NP431_16715 PF03123 CAT RNA binding domain NP431_16715 PF00874 PRD domain NP431_16720 PF02378 Phosphotransferase system, EIIC NP431_16720 PF00367 phosphotransferase system, EIIB NP431_16720 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NP431_16725 PF00232 Glycosyl hydrolase family 1 NP431_16730 PF06039 Malate:quinone oxidoreductase (Mqo) NP431_16735 PF00206 Lyase NP431_16735 PF10415 Fumarase C C-terminus NP431_16740 PF00474 Sodium:solute symporter family NP431_16750 PF18327 Proline utilization A proline dehydrogenase N-terminal domain NP431_16750 PF14850 DNA-binding domain of Proline dehydrogenase NP431_16750 PF01619 Proline dehydrogenase NP431_16750 PF00171 Aldehyde dehydrogenase family NP431_16755 PF12833 Helix-turn-helix domain NP431_16770 PF13350 Tyrosine phosphatase family NP431_16780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_16780 PF03466 LysR substrate binding domain NP431_16785 PF00171 Aldehyde dehydrogenase family NP431_16795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP431_16795 PF17149 Periplasmic sensor domain found in signal transduction proteins NP431_16795 PF00672 HAMP domain NP431_16795 PF00512 His Kinase A (phospho-acceptor) domain NP431_16795 PF00072 Response regulator receiver domain NP431_16795 PF01627 Hpt domain NP431_16805 PF00072 Response regulator receiver domain NP431_16805 PF00486 Transcriptional regulatory protein, C terminal NP431_16810 PF01266 FAD dependent oxidoreductase NP431_16815 PF03553 Na+/H+ antiporter family NP431_16825 PF07729 FCD domain NP431_16825 PF00392 Bacterial regulatory proteins, gntR family NP431_16830 PF05544 Proline racemase NP431_16835 PF01266 FAD dependent oxidoreductase NP431_16835 PF01266 FAD dependent oxidoreductase NP431_16840 PF03553 Na+/H+ antiporter family NP431_16845 PF00701 Dihydrodipicolinate synthetase family NP431_16850 PF00171 Aldehyde dehydrogenase family NP431_16855 PF07690 Major Facilitator Superfamily NP431_16860 PF00892 EamA-like transporter family NP431_16865 PF12833 Helix-turn-helix domain NP431_16865 PF02311 AraC-like ligand binding domain NP431_16870 PF01037 Lrp/AsnC ligand binding domain NP431_16875 PF00682 HMGL-like NP431_16875 PF08502 LeuA allosteric (dimerisation) domain NP431_16890 PF00892 EamA-like transporter family NP431_16895 PF09278 MerR, DNA binding NP431_16895 PF00376 MerR family regulatory protein NP431_16905 PF00589 Phage integrase family NP431_16905 PF14659 Phage integrase, N-terminal SAM-like domain NP431_16905 PF13356 Arm DNA-binding domain NP431_16945 PF00563 EAL domain NP431_16945 PF00990 Diguanylate cyclase, GGDEF domain NP431_16950 PF05025 RbsD / FucU transport protein family NP431_16955 PF00005 ABC transporter NP431_16960 PF02653 Branched-chain amino acid transport system / permease component NP431_16965 PF13407 Periplasmic binding protein domain NP431_16970 PF00294 pfkB family carbohydrate kinase NP431_16975 PF00356 Bacterial regulatory proteins, lacI family NP431_16980 PF13411 MerR HTH family regulatory protein NP431_16995 PF12805 FUSC-like inner membrane protein yccS NP431_17000 PF13361 UvrD-like helicase C-terminal domain NP431_17000 PF00580 UvrD/REP helicase N-terminal domain NP431_17000 PF12462 DNA helicase IV / RNA helicase N terminal NP431_17005 PF02142 MGS-like domain NP431_17010 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NP431_17015 PF00072 Response regulator receiver domain NP431_17015 PF01627 Hpt domain NP431_17015 PF00672 HAMP domain NP431_17015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP431_17015 PF00512 His Kinase A (phospho-acceptor) domain NP431_17030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_17030 PF03466 LysR substrate binding domain NP431_17035 PF16385 Domain of unknown function NP431_17035 PF00884 Sulfatase NP431_17040 PF04055 Radical SAM superfamily NP431_17040 PF13186 Iron-sulfur cluster-binding domain NP431_17045 PF17863 AAA lid domain NP431_17045 PF07726 ATPase family associated with various cellular activities (AAA) NP431_17060 PF00092 von Willebrand factor type A domain NP431_17075 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NP431_17075 PF01872 RibD C-terminal domain NP431_17080 PF00781 Diacylglycerol kinase catalytic domain NP431_17085 PF18081 Fanconi anemia-associated nuclease SAP domain NP431_17085 PF08774 VRR-NUC domain NP431_17090 PF07690 Major Facilitator Superfamily NP431_17100 PF01435 Peptidase family M48 NP431_17105 PF04011 LemA family NP431_17110 PF03606 C4-dicarboxylate anaerobic carrier NP431_17120 PF00583 Acetyltransferase (GNAT) family NP431_17120 PF00814 Glycoprotease family NP431_17125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP431_17125 PF00072 Response regulator receiver domain NP431_17130 PF01926 50S ribosome-binding GTPase NP431_17135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP431_17135 PF00512 His Kinase A (phospho-acceptor) domain NP431_17135 PF00072 Response regulator receiver domain NP431_17135 PF09456 RcsC Alpha-Beta-Loop (ABL) NP431_17140 PF13188 PAS domain NP431_17140 PF03707 Bacterial signalling protein N terminal repeat NP431_17140 PF00990 Diguanylate cyclase, GGDEF domain NP431_17140 PF00563 EAL domain NP431_17145 PF00196 Bacterial regulatory proteins, luxR family NP431_17145 PF00072 Response regulator receiver domain NP431_17150 PF00990 Diguanylate cyclase, GGDEF domain NP431_17160 PF00196 Bacterial regulatory proteins, luxR family NP431_17160 PF00072 Response regulator receiver domain NP431_17190 PF00892 EamA-like transporter family NP431_17205 PF00939 Sodium:sulfate symporter transmembrane region NP431_17215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP431_17215 PF00989 PAS fold NP431_17215 PF17203 Single cache domain 3 NP431_17215 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain NP431_17220 PF12431 Transcriptional regulator NP431_17220 PF00072 Response regulator receiver domain NP431_17230 PF01645 Conserved region in glutamate synthase NP431_17235 PF00141 Peroxidase NP431_17260 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NP431_17270 PF03480 Bacterial extracellular solute-binding protein, family 7 NP431_17275 PF07730 Histidine kinase NP431_17275 PF17200 Single Cache domain 2 NP431_17280 PF00072 Response regulator receiver domain NP431_17280 PF00196 Bacterial regulatory proteins, luxR family NP431_17285 PF03466 LysR substrate binding domain NP431_17285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_17290 PF01144 Coenzyme A transferase NP431_17300 PF01418 Helix-turn-helix domain, rpiR family NP431_17300 PF01380 SIS domain NP431_17310 PF00528 Binding-protein-dependent transport system inner membrane component NP431_17315 PF00528 Binding-protein-dependent transport system inner membrane component NP431_17320 PF00005 ABC transporter NP431_17325 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NP431_17330 PF00528 Binding-protein-dependent transport system inner membrane component NP431_17335 PF00528 Binding-protein-dependent transport system inner membrane component NP431_17335 PF12911 N-terminal TM domain of oligopeptide transport permease C NP431_17340 PF00005 ABC transporter NP431_17340 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NP431_17345 PF01804 Penicillin amidase NP431_17360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP431_17360 PF00672 HAMP domain NP431_17360 PF00512 His Kinase A (phospho-acceptor) domain NP431_17365 PF00072 Response regulator receiver domain NP431_17365 PF00486 Transcriptional regulatory protein, C terminal NP431_17375 PF01047 MarR family NP431_17380 PF00107 Zinc-binding dehydrogenase NP431_17380 PF16884 N-terminal domain of oxidoreductase NP431_17385 PF00149 Calcineurin-like phosphoesterase NP431_17385 PF12320 Type 5 capsule protein repressor C-terminal domain NP431_17390 PF13476 AAA domain NP431_17410 PF01638 HxlR-like helix-turn-helix NP431_17420 PF03466 LysR substrate binding domain NP431_17420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_17430 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NP431_17435 PF03480 Bacterial extracellular solute-binding protein, family 7 NP431_17440 PF01266 FAD dependent oxidoreductase NP431_17450 PF04324 BFD-like [2Fe-2S] binding domain NP431_17450 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP431_17455 PF01042 Endoribonuclease L-PSP NP431_17465 PF08212 Lipocalin-like domain NP431_17480 PF01212 Beta-eliminating lyase NP431_17485 PF00293 NUDIX domain NP431_17490 PF12592 Protein of unknown function (DUF3763) NP431_17490 PF17868 AAA lid domain NP431_17490 PF07728 AAA domain (dynein-related subfamily) NP431_17495 PF05762 VWA domain containing CoxE-like protein NP431_17505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_17505 PF03466 LysR substrate binding domain NP431_17510 PF09330 D-lactate dehydrogenase, membrane binding NP431_17510 PF01565 FAD binding domain NP431_17550 PF00072 Response regulator receiver domain NP431_17550 PF00990 Diguanylate cyclase, GGDEF domain NP431_17555 PF13462 Thioredoxin NP431_17555 PF06965 Na+/H+ antiporter 1 NP431_17575 PF13426 PAS domain NP431_17575 PF00990 Diguanylate cyclase, GGDEF domain NP431_17575 PF00563 EAL domain NP431_17580 PF01272 Transcription elongation factor, GreA/GreB, C-term NP431_17580 PF14760 Rnk N-terminus NP431_17585 PF04324 BFD-like [2Fe-2S] binding domain NP431_17585 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NP431_17585 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NP431_17585 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP431_17585 PF18267 Rubredoxin NAD+ reductase C-terminal domain NP431_17590 PF13806 Rieske-like [2Fe-2S] domain NP431_17595 PF01226 Formate/nitrite transporter NP431_17600 PF14824 Sirohaem biosynthesis protein central NP431_17600 PF10414 Sirohaem synthase dimerisation region NP431_17600 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NP431_17615 PF03605 Anaerobic c4-dicarboxylate membrane transporter NP431_17630 PF11756 Nitrous oxide-stimulated promoter NP431_17635 PF07690 Major Facilitator Superfamily NP431_17640 PF00085 Thioredoxin NP431_17645 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NP431_17645 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NP431_17665 PF02634 FdhD/NarQ family NP431_17670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_17670 PF03466 LysR substrate binding domain NP431_17675 PF00384 Molybdopterin oxidoreductase NP431_17675 PF01568 Molydopterin dinucleotide binding domain NP431_17680 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP431_17680 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NP431_17695 PF04143 Sulphur transport NP431_17705 PF00873 AcrB/AcrD/AcrF family NP431_17710 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NP431_17720 PF13597 Anaerobic ribonucleoside-triphosphate reductase NP431_17720 PF03477 ATP cone domain NP431_17730 PF01554 MatE NP431_17735 PF12833 Helix-turn-helix domain NP431_17735 PF12852 Cupin NP431_17740 PF00155 Aminotransferase class I and II NP431_17745 PF08443 RimK-like ATP-grasp domain NP431_17745 PF18030 RimK PreATP-grasp domain NP431_17755 PF07685 CobB/CobQ-like glutamine amidotransferase domain NP431_17765 PF00528 Binding-protein-dependent transport system inner membrane component NP431_17770 PF00005 ABC transporter NP431_17770 PF03459 TOBE domain NP431_17780 PF01590 GAF domain NP431_17780 PF00563 EAL domain NP431_17780 PF00990 Diguanylate cyclase, GGDEF domain NP431_17780 PF00360 Phytochrome region NP431_17785 PF05230 MASE2 domain NP431_17785 PF00990 Diguanylate cyclase, GGDEF domain NP431_17800 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch NP431_17800 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NP431_17800 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NP431_17805 PF02233 NAD(P) transhydrogenase beta subunit NP431_17815 PF00072 Response regulator receiver domain NP431_17815 PF00486 Transcriptional regulatory protein, C terminal NP431_17830 PF03701 Uncharacterised protein family (UPF0181) NP431_17835 PF00582 Universal stress protein family NP431_17855 PF01253 Translation initiation factor SUI1 NP431_17865 PF07478 D-ala D-ala ligase C-terminus NP431_17865 PF01820 D-ala D-ala ligase N-terminus NP431_17870 PF05036 Sporulation related domain NP431_17875 PF00583 Acetyltransferase (GNAT) family NP431_17875 PF13380 CoA binding domain NP431_17875 PF13607 Succinyl-CoA ligase like flavodoxin domain NP431_17880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_17880 PF03466 LysR substrate binding domain NP431_17885 PF16363 GDP-mannose 4,6 dehydratase NP431_17890 PF00990 Diguanylate cyclase, GGDEF domain NP431_17890 PF00563 EAL domain NP431_17890 PF13426 PAS domain NP431_17890 PF05231 MASE1 NP431_17890 PF08447 PAS fold NP431_17890 PF08448 PAS fold NP431_17895 PF03746 LamB/YcsF family NP431_17900 PF02682 Carboxyltransferase domain, subdomain C and D NP431_17905 PF02626 Carboxyltransferase domain, subdomain A and B NP431_17910 PF01593 Flavin containing amine oxidoreductase NP431_17920 PF00005 ABC transporter NP431_17925 PF13472 GDSL-like Lipase/Acylhydrolase family NP431_17930 PF07055 Enoyl reductase FAD binding domain NP431_17930 PF12241 Trans-2-enoyl-CoA reductase catalytic region NP431_17930 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase NP431_17935 PF13188 PAS domain NP431_17935 PF03707 Bacterial signalling protein N terminal repeat NP431_17935 PF00990 Diguanylate cyclase, GGDEF domain NP431_17935 PF00563 EAL domain NP431_17945 PF00226 DnaJ domain NP431_17945 PF01556 DnaJ C terminal domain NP431_17945 PF00684 DnaJ central domain NP431_17960 PF03091 CutA1 divalent ion tolerance protein NP431_17970 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NP431_17970 PF12793 Sugar transport-related sRNA regulator N-term NP431_17980 PF03061 Thioesterase superfamily NP431_17995 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) NP431_18000 PF12262 Bacterial virulence factor lipase N-terminal NP431_18015 PF03741 Integral membrane protein TerC family NP431_18020 PF00149 Calcineurin-like phosphoesterase NP431_18020 PF02872 5'-nucleotidase, C-terminal domain NP431_18025 PF11398 Protein of unknown function (DUF2813) NP431_18030 PF06496 Protein of unknown function (DUF1097) NP431_18035 PF03466 LysR substrate binding domain NP431_18035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_18040 PF01226 Formate/nitrite transporter NP431_18045 PF04264 YceI-like domain NP431_18050 PF01292 Prokaryotic cytochrome b561 NP431_18065 PF00563 EAL domain NP431_18065 PF12792 CSS motif domain associated with EAL NP431_18070 PF00270 DEAD/DEAH box helicase NP431_18070 PF00271 Helicase conserved C-terminal domain NP431_18075 PF04336 Acyl carrier protein phosphodiesterase NP431_18080 PF12729 Four helix bundle sensory module for signal transduction NP431_18080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP431_18080 PF00672 HAMP domain NP431_18090 PF13419 Haloacid dehalogenase-like hydrolase NP431_18105 PF00294 pfkB family carbohydrate kinase NP431_18110 PF01268 Formate--tetrahydrofolate ligase NP431_18115 PF00483 Nucleotidyl transferase NP431_18120 PF06483 Chitinase C NP431_18120 PF00704 Glycosyl hydrolases family 18 NP431_18125 PF06719 AraC-type transcriptional regulator N-terminus NP431_18125 PF12833 Helix-turn-helix domain NP431_18130 PF00465 Iron-containing alcohol dehydrogenase NP431_18140 PF00005 ABC transporter NP431_18145 PF00528 Binding-protein-dependent transport system inner membrane component NP431_18150 PF00497 Bacterial extracellular solute-binding proteins, family 3 NP431_18155 PF00528 Binding-protein-dependent transport system inner membrane component NP431_18170 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NP431_18170 PF00356 Bacterial regulatory proteins, lacI family NP431_18175 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NP431_18175 PF00381 PTS HPr component phosphorylation site NP431_18180 PF00294 pfkB family carbohydrate kinase NP431_18185 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NP431_18185 PF02378 Phosphotransferase system, EIIC NP431_18190 PF00873 AcrB/AcrD/AcrF family NP431_18200 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NP431_18210 PF01571 Aminomethyltransferase folate-binding domain NP431_18210 PF08669 Glycine cleavage T-protein C-terminal barrel domain NP431_18220 PF00464 Serine hydroxymethyltransferase NP431_18225 PF01597 Glycine cleavage H-protein NP431_18230 PF02347 Glycine cleavage system P-protein NP431_18280 PF01063 Amino-transferase class IV NP431_18285 PF00497 Bacterial extracellular solute-binding proteins, family 3 NP431_18290 PF02885 Glycosyl transferase family, helical bundle domain NP431_18290 PF00591 Glycosyl transferase family, a/b domain NP431_18295 PF03222 Tryptophan/tyrosine permease family NP431_18325 PF00012 Hsp70 protein NP431_18340 PF00676 Dehydrogenase E1 component NP431_18345 PF02780 Transketolase, C-terminal domain NP431_18345 PF02779 Transketolase, pyrimidine binding domain NP431_18350 PF02817 e3 binding domain NP431_18350 PF00364 Biotin-requiring enzyme NP431_18350 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NP431_18360 PF00668 Condensation domain NP431_18360 PF16197 Ketoacyl-synthetase C-terminal extension NP431_18360 PF00109 Beta-ketoacyl synthase, N-terminal domain NP431_18360 PF02801 Beta-ketoacyl synthase, C-terminal domain NP431_18360 PF00202 Aminotransferase class-III NP431_18360 PF00501 AMP-binding enzyme NP431_18360 PF13193 AMP-binding enzyme C-terminal domain NP431_18360 PF00550 Phosphopantetheine attachment site NP431_18365 PF08220 DeoR-like helix-turn-helix domain NP431_18365 PF00455 DeoR C terminal sensor domain NP431_18370 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NP431_18370 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NP431_18375 PF03928 Haem-degrading NP431_18390 PF13193 AMP-binding enzyme C-terminal domain NP431_18390 PF00501 AMP-binding enzyme NP431_18395 PF00364 Biotin-requiring enzyme NP431_18395 PF02779 Transketolase, pyrimidine binding domain NP431_18395 PF02780 Transketolase, C-terminal domain NP431_18400 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NP431_18400 PF00364 Biotin-requiring enzyme NP431_18400 PF02817 e3 binding domain NP431_18410 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NP431_18410 PF02896 PEP-utilising enzyme, TIM barrel domain NP431_18410 PF00391 PEP-utilising enzyme, mobile domain NP431_18415 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B NP431_18425 PF00384 Molybdopterin oxidoreductase NP431_18425 PF01568 Molydopterin dinucleotide binding domain NP431_18425 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NP431_18430 PF00689 Cation transporting ATPase, C-terminus NP431_18430 PF00690 Cation transporter/ATPase, N-terminus NP431_18440 PF00082 Subtilase family NP431_18440 PF05922 Peptidase inhibitor I9 NP431_18450 PF01590 GAF domain NP431_18450 PF00158 Sigma-54 interaction domain NP431_18455 PF10605 3HB-oligomer hydrolase (3HBOH) NP431_18460 PF00474 Sodium:solute symporter family NP431_18465 PF16875 Glycosyl hydrolase family 36 N-terminal domain NP431_18465 PF16874 Glycosyl hydrolase family 36 C-terminal domain NP431_18470 PF00356 Bacterial regulatory proteins, lacI family NP431_18475 PF00589 Phage integrase family NP431_18475 PF02899 Phage integrase, N-terminal SAM-like domain NP431_18495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_18495 PF03466 LysR substrate binding domain NP431_18500 PF07859 alpha/beta hydrolase fold NP431_18500 PF00934 PE family NP431_18505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_18505 PF03466 LysR substrate binding domain NP431_18510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_18510 PF03466 LysR substrate binding domain NP431_18530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_18530 PF03466 LysR substrate binding domain NP431_18540 PF00082 Subtilase family NP431_18540 PF04151 Bacterial pre-peptidase C-terminal domain NP431_18545 PF05995 Cysteine dioxygenase type I NP431_18555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_18555 PF03466 LysR substrate binding domain NP431_18565 PF01235 Sodium:alanine symporter family NP431_18570 PF00528 Binding-protein-dependent transport system inner membrane component NP431_18575 PF00528 Binding-protein-dependent transport system inner membrane component NP431_18580 PF00497 Bacterial extracellular solute-binding proteins, family 3 NP431_18585 PF00005 ABC transporter NP431_18590 PF08031 Berberine and berberine like NP431_18590 PF01565 FAD binding domain NP431_18595 PF00141 Peroxidase NP431_18605 PF01975 Survival protein SurE NP431_18620 PF02574 Homocysteine S-methyltransferase NP431_18625 PF13520 Amino acid permease NP431_18635 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NP431_18650 PF02028 BCCT, betaine/carnitine/choline family transporter NP431_18660 PF00171 Aldehyde dehydrogenase family NP431_18675 PF01040 UbiA prenyltransferase family NP431_18685 PF00510 Cytochrome c oxidase subunit III NP431_18690 PF00115 Cytochrome C and Quinol oxidase polypeptide I NP431_18695 PF06481 COX Aromatic Rich Motif NP431_18695 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NP431_18705 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NP431_18705 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NP431_18710 PF00378 Enoyl-CoA hydratase/isomerase NP431_18715 PF00378 Enoyl-CoA hydratase/isomerase NP431_18720 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NP431_18720 PF02770 Acyl-CoA dehydrogenase, middle domain NP431_18720 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NP431_18725 PF00171 Aldehyde dehydrogenase family NP431_18730 PF00108 Thiolase, N-terminal domain NP431_18730 PF02803 Thiolase, C-terminal domain NP431_18735 PF00376 MerR family regulatory protein NP431_18735 PF09278 MerR, DNA binding NP431_18740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NP431_18740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NP431_18740 PF02770 Acyl-CoA dehydrogenase, middle domain NP431_18745 PF01039 Carboxyl transferase domain NP431_18755 PF00682 HMGL-like NP431_18760 PF10063 Uncharacterized integral membrane protein (DUF2301) NP431_18770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP431_18770 PF08447 PAS fold NP431_18770 PF13426 PAS domain NP431_18775 PF00871 Acetokinase family NP431_18780 PF00990 Diguanylate cyclase, GGDEF domain NP431_18780 PF00563 EAL domain NP431_18780 PF03707 Bacterial signalling protein N terminal repeat NP431_18785 PF03880 DbpA RNA binding domain NP431_18785 PF00270 DEAD/DEAH box helicase NP431_18785 PF00271 Helicase conserved C-terminal domain NP431_18790 PF00465 Iron-containing alcohol dehydrogenase NP431_18795 PF00596 Class II Aldolase and Adducin N-terminal domain NP431_18800 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NP431_18800 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NP431_18805 PF02952 L-fucose isomerase, C-terminal domain NP431_18805 PF07881 L-fucose isomerase, first N-terminal domain NP431_18805 PF07882 L-fucose isomerase, second N-terminal domain NP431_18810 PF00455 DeoR C terminal sensor domain NP431_18810 PF08220 DeoR-like helix-turn-helix domain NP431_18815 PF03334 Na+/H+ antiporter subunit NP431_18820 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) NP431_18825 PF01899 Na+/H+ ion antiporter subunit NP431_18830 PF00361 Proton-conducting membrane transporter NP431_18835 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NP431_18840 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter NP431_18840 PF00361 Proton-conducting membrane transporter NP431_18840 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NP431_18840 PF13244 Domain of unknown function (DUF4040) NP431_18845 PF00582 Universal stress protein family NP431_18850 PF08206 Ribonuclease B OB domain NP431_18850 PF00773 RNB domain NP431_18850 PF00575 S1 RNA binding domain NP431_18860 PF12849 PBP superfamily domain NP431_18865 PF01575 MaoC like domain NP431_18875 PF00589 Phage integrase family NP431_18875 PF18644 Phage integrase SAM-like domain NP431_18880 PF00589 Phage integrase family NP431_18880 PF14659 Phage integrase, N-terminal SAM-like domain NP431_18925 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NP431_18925 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain NP431_18930 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain NP431_18930 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain NP431_18935 PF00175 Oxidoreductase NAD-binding domain NP431_18935 PF00667 FAD binding domain NP431_18935 PF00258 Flavodoxin NP431_18940 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP431_18945 PF00202 Aminotransferase class-III NP431_18950 PF00067 Cytochrome P450 NP431_18955 PF13520 Amino acid permease NP431_18980 PF08240 Alcohol dehydrogenase GroES-like domain NP431_18980 PF00107 Zinc-binding dehydrogenase NP431_18995 PF00067 Cytochrome P450 NP431_19005 PF00561 alpha/beta hydrolase fold NP431_19010 PF05721 Phytanoyl-CoA dioxygenase (PhyH) NP431_19015 PF01261 Xylose isomerase-like TIM barrel NP431_19025 PF00440 Bacterial regulatory proteins, tetR family NP431_19030 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP431_19035 PF00085 Thioredoxin NP431_19040 PF00085 Thioredoxin NP431_19050 PF07690 Major Facilitator Superfamily NP431_19055 PF01022 Bacterial regulatory protein, arsR family NP431_19060 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP431_19060 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NP431_19065 PF00581 Rhodanese-like domain NP431_19075 PF00696 Amino acid kinase family NP431_19080 PF06545 Protein of unknown function (DUF1116) NP431_19085 PF00549 CoA-ligase NP431_19085 PF02629 CoA binding domain NP431_19100 PF07690 Major Facilitator Superfamily NP431_19105 PF03466 LysR substrate binding domain NP431_19105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_19115 PF03928 Haem-degrading NP431_19120 PF00486 Transcriptional regulatory protein, C terminal NP431_19120 PF00072 Response regulator receiver domain NP431_19125 PF00512 His Kinase A (phospho-acceptor) domain NP431_19125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP431_19125 PF00989 PAS fold NP431_19125 PF16736 Single Cache-like NP431_19130 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NP431_19135 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NP431_19155 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NP431_19170 PF01594 AI-2E family transporter NP431_19175 PF01527 Transposase NP431_19185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_19185 PF03466 LysR substrate binding domain NP431_19190 PF08543 Phosphomethylpyrimidine kinase NP431_19200 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NP431_19200 PF00529 HlyD membrane-fusion protein of T1SS NP431_19205 PF12794 Mechanosensitive ion channel inner membrane domain 1 NP431_19205 PF00924 Mechanosensitive ion channel NP431_19205 PF12795 Mechanosensitive ion channel porin domain NP431_19220 PF00005 ABC transporter NP431_19225 PF02405 Permease MlaE NP431_19235 PF13533 Biotin-lipoyl like NP431_19260 PF00990 Diguanylate cyclase, GGDEF domain NP431_19260 PF00072 Response regulator receiver domain NP431_19265 PF01925 Sulfite exporter TauE/SafE NP431_19275 PF09339 IclR helix-turn-helix domain NP431_19275 PF01614 Bacterial transcriptional regulator NP431_19285 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component NP431_19285 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NP431_19290 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component NP431_19295 PF03480 Bacterial extracellular solute-binding protein, family 7 NP431_19300 PF01266 FAD dependent oxidoreductase NP431_19315 PF03601 Conserved hypothetical protein 698 NP431_19320 PF00205 Thiamine pyrophosphate enzyme, central domain NP431_19320 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NP431_19320 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NP431_19325 PF08406 CbbQ/NirQ/NorQ C-terminal NP431_19325 PF07728 AAA domain (dynein-related subfamily) NP431_19325 PF12556 Cobaltochelatase CobS subunit N terminal NP431_19330 PF11775 Cobalamin biosynthesis protein CobT VWA domain NP431_19330 PF06213 Cobalamin biosynthesis protein CobT NP431_19335 PF13419 Haloacid dehalogenase-like hydrolase NP431_19340 PF07690 Major Facilitator Superfamily NP431_19345 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NP431_19345 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NP431_19350 PF08125 Mannitol dehydrogenase C-terminal domain NP431_19350 PF01232 Mannitol dehydrogenase Rossmann domain NP431_19355 PF04198 Putative sugar-binding domain NP431_19380 PF00155 Aminotransferase class I and II NP431_19395 PF12833 Helix-turn-helix domain NP431_19395 PF06719 AraC-type transcriptional regulator N-terminus NP431_19400 PF10509 Galactokinase galactose-binding signature NP431_19400 PF00288 GHMP kinases N terminal domain NP431_19400 PF08544 GHMP kinases C terminal NP431_19405 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain NP431_19405 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain NP431_19410 PF16363 GDP-mannose 4,6 dehydratase NP431_19415 PF08240 Alcohol dehydrogenase GroES-like domain NP431_19415 PF00107 Zinc-binding dehydrogenase NP431_19420 PF12833 Helix-turn-helix domain NP431_19425 PF03313 Serine dehydratase alpha chain NP431_19425 PF03315 Serine dehydratase beta chain NP431_19430 PF00551 Formyl transferase NP431_19440 PF17806 Sarcosine oxidase A3 domain NP431_19440 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP431_19440 PF08669 Glycine cleavage T-protein C-terminal barrel domain NP431_19440 PF01571 Aminomethyltransferase folate-binding domain NP431_19445 PF04267 Sarcosine oxidase, delta subunit family NP431_19450 PF01266 FAD dependent oxidoreductase NP431_19455 PF00464 Serine hydroxymethyltransferase NP431_19460 PF00970 Oxidoreductase FAD-binding domain NP431_19460 PF00175 Oxidoreductase NAD-binding domain NP431_19460 PF00111 2Fe-2S iron-sulfur cluster binding domain NP431_19465 PF00355 Rieske [2Fe-2S] domain NP431_19465 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NP431_19470 PF00202 Aminotransferase class-III NP431_19480 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NP431_19490 PF03480 Bacterial extracellular solute-binding protein, family 7 NP431_19495 PF00171 Aldehyde dehydrogenase family NP431_19500 PF03466 LysR substrate binding domain NP431_19500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_19575 PF00306 ATP synthase alpha/beta chain, C terminal domain NP431_19575 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NP431_19580 PF00430 ATP synthase B/B' CF(0) NP431_19580 PF00213 ATP synthase delta (OSCP) subunit NP431_19585 PF00137 ATP synthase subunit C NP431_19590 PF00119 ATP synthase A chain NP431_19605 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NP431_19605 PF02874 ATP synthase alpha/beta family, beta-barrel domain NP431_19610 PF00248 Aldo/keto reductase family NP431_19620 PF02028 BCCT, betaine/carnitine/choline family transporter NP431_19630 PF01012 Electron transfer flavoprotein domain NP431_19630 PF00766 Electron transfer flavoprotein FAD-binding domain NP431_19635 PF02754 Cysteine-rich domain NP431_19635 PF13183 4Fe-4S dicluster domain NP431_19640 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NP431_19655 PF01965 DJ-1/PfpI family NP431_19655 PF12833 Helix-turn-helix domain NP431_19660 PF02129 X-Pro dipeptidyl-peptidase (S15 family) NP431_19665 PF00465 Iron-containing alcohol dehydrogenase NP431_19670 PF02685 Glucokinase NP431_19675 PF12706 Beta-lactamase superfamily domain NP431_19685 PF00005 ABC transporter NP431_19690 PF12792 CSS motif domain associated with EAL NP431_19690 PF00563 EAL domain NP431_19705 PF00271 Helicase conserved C-terminal domain NP431_19705 PF00270 DEAD/DEAH box helicase NP431_19710 PF02492 CobW/HypB/UreG, nucleotide-binding domain NP431_19710 PF07683 Cobalamin synthesis protein cobW C-terminal domain NP431_19715 PF01470 Pyroglutamyl peptidase NP431_19725 PF00291 Pyridoxal-phosphate dependent enzyme NP431_19730 PF12843 Putative quorum-sensing-regulated virulence factor NP431_19750 PF01329 Pterin 4 alpha carbinolamine dehydratase NP431_19755 PF00351 Biopterin-dependent aromatic amino acid hydroxylase NP431_19760 PF13193 AMP-binding enzyme C-terminal domain NP431_19760 PF00501 AMP-binding enzyme NP431_19770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_19770 PF03466 LysR substrate binding domain NP431_19780 PF00892 EamA-like transporter family NP431_19790 PF00465 Iron-containing alcohol dehydrogenase NP431_19795 PF07995 Glucose / Sorbosone dehydrogenase NP431_19805 PF00210 Ferritin-like domain NP431_19810 PF00672 HAMP domain NP431_19810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP431_19820 PF02687 FtsX-like permease family NP431_19820 PF12704 MacB-like periplasmic core domain NP431_19820 PF00005 ABC transporter NP431_19825 PF00005 ABC transporter NP431_19825 PF02687 FtsX-like permease family NP431_19825 PF12704 MacB-like periplasmic core domain NP431_19845 PF00313 'Cold-shock' DNA-binding domain NP431_19865 PF05736 OprF membrane domain NP431_19865 PF00691 OmpA family NP431_19875 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NP431_19875 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NP431_19880 PF01040 UbiA prenyltransferase family NP431_19885 PF02628 Cytochrome oxidase assembly protein NP431_19905 PF00510 Cytochrome c oxidase subunit III NP431_19910 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 NP431_19915 PF00115 Cytochrome C and Quinol oxidase polypeptide I NP431_19920 PF02790 Cytochrome C oxidase subunit II, transmembrane domain NP431_19920 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NP431_19925 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NP431_19925 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NP431_19925 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NP431_19925 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NP431_19930 PF01810 LysE type translocator NP431_19950 PF01557 Fumarylacetoacetate (FAA) hydrolase family NP431_19975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_19975 PF03466 LysR substrate binding domain NP431_19980 PF00990 Diguanylate cyclase, GGDEF domain NP431_19980 PF08448 PAS fold NP431_19980 PF08447 PAS fold NP431_19980 PF00563 EAL domain NP431_19985 PF01476 LysM domain NP431_19985 PF01551 Peptidase family M23 NP431_19985 PF08525 Opacity-associated protein A N-terminal motif NP431_20005 PF07670 Nucleoside recognition NP431_20010 PF02743 Cache domain NP431_20010 PF00672 HAMP domain NP431_20010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP431_20020 PF03222 Tryptophan/tyrosine permease family NP431_20040 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NP431_20055 PF01758 Sodium Bile acid symporter family NP431_20060 PF02567 Phenazine biosynthesis-like protein NP431_20070 PF00005 ABC transporter NP431_20085 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NP431_20085 PF12838 4Fe-4S dicluster domain NP431_20085 PF00384 Molybdopterin oxidoreductase NP431_20085 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NP431_20085 PF01568 Molydopterin dinucleotide binding domain NP431_20105 PF00873 AcrB/AcrD/AcrF family NP431_20115 PF00111 2Fe-2S iron-sulfur cluster binding domain NP431_20115 PF00970 Oxidoreductase FAD-binding domain NP431_20115 PF00175 Oxidoreductase NAD-binding domain NP431_20125 PF00990 Diguanylate cyclase, GGDEF domain NP431_20135 PF13302 Acetyltransferase (GNAT) domain NP431_20140 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) NP431_20145 PF00582 Universal stress protein family NP431_20150 PF02525 Flavodoxin-like fold NP431_20155 PF02254 TrkA-N domain NP431_20155 PF00999 Sodium/hydrogen exchanger family NP431_20165 PF01915 Glycosyl hydrolase family 3 C-terminal domain NP431_20165 PF14310 Fibronectin type III-like domain NP431_20165 PF00933 Glycosyl hydrolase family 3 N terminal domain NP431_20175 PF00128 Alpha amylase, catalytic domain NP431_20180 PF00465 Iron-containing alcohol dehydrogenase NP431_20185 PF01266 FAD dependent oxidoreductase NP431_20195 PF00202 Aminotransferase class-III NP431_20200 PF00171 Aldehyde dehydrogenase family NP431_20205 PF03480 Bacterial extracellular solute-binding protein, family 7 NP431_20215 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NP431_20235 PF00999 Sodium/hydrogen exchanger family NP431_20240 PF01168 Alanine racemase, N-terminal domain NP431_20240 PF00842 Alanine racemase, C-terminal domain NP431_20250 PF13378 Enolase C-terminal domain-like NP431_20250 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NP431_20255 PF01063 Amino-transferase class IV NP431_20270 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NP431_20275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_20275 PF03466 LysR substrate binding domain NP431_20280 PF08240 Alcohol dehydrogenase GroES-like domain NP431_20280 PF00107 Zinc-binding dehydrogenase NP431_20285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_20285 PF03466 LysR substrate binding domain NP431_20295 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase NP431_20310 PF01844 HNH endonuclease NP431_20320 PF01584 CheW-like domain NP431_20320 PF00072 Response regulator receiver domain NP431_20325 PF01243 Pyridoxamine 5'-phosphate oxidase NP431_20360 PF01467 Cytidylyltransferase-like NP431_20365 PF02540 NAD synthase NP431_20370 PF03476 MOSC N-terminal beta barrel domain NP431_20370 PF00111 2Fe-2S iron-sulfur cluster binding domain NP431_20370 PF03473 MOSC domain NP431_20370 PF03476 MOSC N-terminal beta barrel domain NP431_20370 PF00111 2Fe-2S iron-sulfur cluster binding domain NP431_20370 PF03473 MOSC domain NP431_20380 PF01979 Amidohydrolase family NP431_20385 PF05661 Protein of unknown function (DUF808) NP431_20395 PF00929 Exonuclease NP431_20395 PF14579 Helix-hairpin-helix motif NP431_20395 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NP431_20395 PF11490 DNA polymerase III polC-type N-terminus II NP431_20395 PF07733 Bacterial DNA polymerase III alpha NTPase domain NP431_20395 PF02811 PHP domain NP431_20410 PF00664 ABC transporter transmembrane region NP431_20410 PF00005 ABC transporter NP431_20420 PF12146 Serine aminopeptidase, S33 NP431_20425 PF12146 Serine aminopeptidase, S33 NP431_20430 PF03466 LysR substrate binding domain NP431_20430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_20450 PF00990 Diguanylate cyclase, GGDEF domain NP431_20450 PF08448 PAS fold NP431_20455 PF00011 Hsp20/alpha crystallin family NP431_20465 PF00743 Flavin-binding monooxygenase-like NP431_20470 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term NP431_20470 PF12833 Helix-turn-helix domain NP431_20475 PF02626 Carboxyltransferase domain, subdomain A and B NP431_20480 PF02682 Carboxyltransferase domain, subdomain C and D NP431_20485 PF03746 LamB/YcsF family NP431_20500 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NP431_20515 PF00155 Aminotransferase class I and II NP431_20525 PF01037 Lrp/AsnC ligand binding domain NP431_20530 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NP431_20530 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NP431_20545 PF07634 RtxA repeat NP431_20545 PF16671 Actin cross-linking domain NP431_20545 PF11713 Peptidase C80 family NP431_20545 PF12146 Serine aminopeptidase, S33 NP431_20545 PF11647 Membrane Localization Domain NP431_20555 PF01464 Transglycosylase SLT domain NP431_20555 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain NP431_20590 PF02028 BCCT, betaine/carnitine/choline family transporter NP431_20595 PF00072 Response regulator receiver domain NP431_20600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP431_20600 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NP431_20600 PF00672 HAMP domain NP431_20600 PF00512 His Kinase A (phospho-acceptor) domain NP431_20600 PF01627 Hpt domain NP431_20600 PF00072 Response regulator receiver domain NP431_20615 PF00528 Binding-protein-dependent transport system inner membrane component NP431_20620 PF00528 Binding-protein-dependent transport system inner membrane component NP431_20620 PF14785 Maltose transport system permease protein MalF P2 domain NP431_20625 PF01547 Bacterial extracellular solute-binding protein NP431_20630 PF00005 ABC transporter NP431_20630 PF08402 TOBE domain NP431_20635 PF02397 Bacterial sugar transferase NP431_20650 PF13614 AAA domain NP431_20650 PF13807 G-rich domain on putative tyrosine kinase NP431_20650 PF02706 Chain length determinant protein NP431_20660 PF13439 Glycosyltransferase Family 4 NP431_20660 PF00534 Glycosyl transferases group 1 NP431_20675 PF00534 Glycosyl transferases group 1 NP431_20675 PF13439 Glycosyltransferase Family 4 NP431_20690 PF04266 ASCH domain NP431_20695 PF16925 Tetracyclin repressor-like, C-terminal domain NP431_20695 PF00440 Bacterial regulatory proteins, tetR family NP431_20700 PF16884 N-terminal domain of oxidoreductase NP431_20700 PF00107 Zinc-binding dehydrogenase NP431_20705 PF13417 Glutathione S-transferase, N-terminal domain NP431_20710 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NP431_20710 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NP431_20715 PF13419 Haloacid dehalogenase-like hydrolase NP431_20720 PF00127 Copper binding proteins, plastocyanin/azurin family NP431_20730 PF01266 FAD dependent oxidoreductase NP431_20735 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP431_20735 PF18113 Rubredoxin binding C-terminal domain NP431_20745 PF00171 Aldehyde dehydrogenase family NP431_20750 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NP431_20750 PF00355 Rieske [2Fe-2S] domain NP431_20755 PF02028 BCCT, betaine/carnitine/choline family transporter NP431_20760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_20760 PF03466 LysR substrate binding domain NP431_20765 PF00664 ABC transporter transmembrane region NP431_20765 PF00005 ABC transporter NP431_20770 PF07715 TonB-dependent Receptor Plug Domain NP431_20770 PF00593 TonB dependent receptor NP431_20775 PF00005 ABC transporter NP431_20780 PF01497 Periplasmic binding protein NP431_20785 PF01032 FecCD transport family NP431_20795 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NP431_20795 PF00529 HlyD membrane-fusion protein of T1SS NP431_20800 PF00664 ABC transporter transmembrane region NP431_20800 PF00005 ABC transporter NP431_20810 PF00196 Bacterial regulatory proteins, luxR family NP431_20815 PF00196 Bacterial regulatory proteins, luxR family NP431_20825 PF07726 ATPase family associated with various cellular activities (AAA) NP431_20825 PF17863 AAA lid domain NP431_20830 PF01882 Protein of unknown function DUF58 NP431_20845 PF13519 von Willebrand factor type A domain NP431_20855 PF00005 ABC transporter NP431_20860 PF00528 Binding-protein-dependent transport system inner membrane component NP431_20865 PF00528 Binding-protein-dependent transport system inner membrane component NP431_20870 PF12849 PBP superfamily domain NP431_20875 PF00672 HAMP domain NP431_20875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP431_20875 PF17200 Single Cache domain 2 NP431_20880 PF00271 Helicase conserved C-terminal domain NP431_20880 PF00270 DEAD/DEAH box helicase NP431_20890 PF17969 L,D-transpeptidase C-terminal domain NP431_20890 PF01476 LysM domain NP431_20890 PF03734 L,D-transpeptidase catalytic domain NP431_20895 PF00875 DNA photolyase NP431_20895 PF03441 FAD binding domain of DNA photolyase NP431_20900 PF13411 MerR HTH family regulatory protein NP431_20905 PF08349 Protein of unknown function (DUF1722) NP431_20910 PF01048 Phosphorylase superfamily NP431_20925 PF00990 Diguanylate cyclase, GGDEF domain NP431_20930 PF11742 Protein of unknown function (DUF3302) NP431_20935 PF00529 HlyD membrane-fusion protein of T1SS NP431_20935 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NP431_20940 PF07155 ECF-type riboflavin transporter, S component NP431_20950 PF12837 4Fe-4S binding domain NP431_20950 PF12801 4Fe-4S binding domain NP431_20955 PF12838 4Fe-4S dicluster domain NP431_20955 PF12800 4Fe-4S binding domain NP431_20960 PF00583 Acetyltransferase (GNAT) family NP431_20975 PF07238 PilZ domain NP431_20975 PF12945 Flagellar protein YcgR NP431_20980 PF13654 AAA domain NP431_20980 PF05362 Lon protease (S16) C-terminal proteolytic domain NP431_20990 PF00326 Prolyl oligopeptidase family NP431_20990 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NP431_20995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_20995 PF03466 LysR substrate binding domain NP431_21000 PF02652 L-lactate permease NP431_21005 PF01070 FMN-dependent dehydrogenase NP431_21015 PF00924 Mechanosensitive ion channel NP431_21020 PF00194 Eukaryotic-type carbonic anhydrase NP431_21030 PF00313 'Cold-shock' DNA-binding domain NP431_21040 PF00107 Zinc-binding dehydrogenase NP431_21040 PF08240 Alcohol dehydrogenase GroES-like domain NP431_21045 PF00155 Aminotransferase class I and II NP431_21050 PF13188 PAS domain NP431_21050 PF00563 EAL domain NP431_21050 PF03707 Bacterial signalling protein N terminal repeat NP431_21050 PF00990 Diguanylate cyclase, GGDEF domain NP431_21065 PF00080 Copper/zinc superoxide dismutase (SODC) NP431_21070 PF13426 PAS domain NP431_21070 PF00072 Response regulator receiver domain NP431_21070 PF08448 PAS fold NP431_21070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP431_21070 PF00512 His Kinase A (phospho-acceptor) domain NP431_21075 PF00072 Response regulator receiver domain NP431_21075 PF00486 Transcriptional regulatory protein, C terminal NP431_21090 PF03466 LysR substrate binding domain NP431_21090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_21095 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NP431_21125 PF00892 EamA-like transporter family NP431_21135 PF02321 Outer membrane efflux protein NP431_21145 PF13533 Biotin-lipoyl like NP431_21155 PF01594 AI-2E family transporter NP431_21160 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) NP431_21165 PF00970 Oxidoreductase FAD-binding domain NP431_21165 PF00175 Oxidoreductase NAD-binding domain NP431_21175 PF09905 DNA-binding protein VF530 NP431_21180 PF07943 Penicillin-binding protein 5, C-terminal domain NP431_21180 PF00768 D-alanyl-D-alanine carboxypeptidase NP431_21185 PF00561 alpha/beta hydrolase fold NP431_21195 PF00581 Rhodanese-like domain NP431_21195 PF17773 UPF0176 acylphosphatase like domain NP431_21200 PF01734 Patatin-like phospholipase NP431_21205 PF01914 MarC family integral membrane protein NP431_21210 PF00881 Nitroreductase family NP431_21220 PF00375 Sodium:dicarboxylate symporter family NP431_21225 PF06803 Protein of unknown function (DUF1232) NP431_21235 PF07670 Nucleoside recognition NP431_21240 PF07670 Nucleoside recognition NP431_21245 PF00128 Alpha amylase, catalytic domain NP431_21250 PF00912 Transglycosylase NP431_21255 PF00128 Alpha amylase, catalytic domain NP431_21255 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NP431_21255 PF02806 Alpha amylase, C-terminal all-beta domain NP431_21260 PF02446 4-alpha-glucanotransferase NP431_21265 PF00343 Carbohydrate phosphorylase NP431_21270 PF17874 MalT-like TPR region NP431_21270 PF00196 Bacterial regulatory proteins, luxR family NP431_21285 PF02630 SCO1/SenC NP431_21290 PF00367 phosphotransferase system, EIIB NP431_21290 PF02378 Phosphotransferase system, EIIC NP431_21295 PF03193 RsgA GTPase NP431_21300 PF00375 Sodium:dicarboxylate symporter family NP431_21305 PF08543 Phosphomethylpyrimidine kinase NP431_21315 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NP431_21315 PF11852 Domain of unknown function (DUF3372) NP431_21315 PF17967 Pullulanase N2 domain NP431_21315 PF18494 Pullulanase Ins domain NP431_21315 PF03714 Bacterial pullanase-associated domain NP431_21320 PF02903 Alpha amylase, N-terminal ig-like domain NP431_21320 PF00128 Alpha amylase, catalytic domain NP431_21330 PF07148 Maltose operon periplasmic protein precursor (MalM) NP431_21335 PF02264 LamB porin NP431_21340 PF00128 Alpha amylase, catalytic domain NP431_21340 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NP431_21345 PF00356 Bacterial regulatory proteins, lacI family NP431_21350 PF00367 phosphotransferase system, EIIB NP431_21350 PF02378 Phosphotransferase system, EIIC NP431_21360 PF07690 Major Facilitator Superfamily NP431_21365 PF00593 TonB dependent receptor NP431_21365 PF07715 TonB-dependent Receptor Plug Domain NP431_21370 PF03466 LysR substrate binding domain NP431_21370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_21375 PF01497 Periplasmic binding protein NP431_21380 PF01032 FecCD transport family NP431_21385 PF01032 FecCD transport family NP431_21390 PF00005 ABC transporter NP431_21395 PF00440 Bacterial regulatory proteins, tetR family NP431_21395 PF08360 QacR-like protein, C-terminal region NP431_21405 PF13533 Biotin-lipoyl like NP431_21410 PF01212 Beta-eliminating lyase NP431_21415 PF03222 Tryptophan/tyrosine permease family NP431_21430 PF04320 Protein with unknown function (DUF469) NP431_21445 PF00893 Small Multidrug Resistance protein NP431_21450 PF03466 LysR substrate binding domain NP431_21450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_21460 PF00171 Aldehyde dehydrogenase family NP431_21465 PF00202 Aminotransferase class-III NP431_21470 PF03466 LysR substrate binding domain NP431_21470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_21475 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NP431_21475 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NP431_21480 PF03466 LysR substrate binding domain NP431_21480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_21485 PF06339 Ectoine synthase NP431_21490 PF00474 Sodium:solute symporter family NP431_21505 PF01266 FAD dependent oxidoreductase NP431_21510 PF01042 Endoribonuclease L-PSP NP431_21515 PF02423 Ornithine cyclodeaminase/mu-crystallin family NP431_21520 PF02311 AraC-like ligand binding domain NP431_21520 PF12833 Helix-turn-helix domain NP431_21550 PF00251 Glycosyl hydrolases family 32 N-terminal domain NP431_21550 PF08244 Glycosyl hydrolases family 32 C terminal NP431_21555 PF02435 Levansucrase/Invertase NP431_21560 PF00141 Peroxidase NP431_21570 PF00675 Insulinase (Peptidase family M16) NP431_21570 PF05193 Peptidase M16 inactive domain NP431_21575 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain NP431_21575 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain NP431_21575 PF02278 Polysaccharide lyase family 8, super-sandwich domain NP431_21580 PF09508 Lacto-N-biose phosphorylase N-terminal TIM barrel domain NP431_21580 PF17386 Lacto-N-biose phosphorylase C-terminal domain NP431_21580 PF17385 Lacto-N-biose phosphorylase central domain NP431_21585 PF07470 Glycosyl Hydrolase Family 88 NP431_21590 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain NP431_21590 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain NP431_21595 PF01370 NAD dependent epimerase/dehydratase family NP431_21600 PF01740 STAS domain NP431_21600 PF00916 Sulfate permease family NP431_21605 PF02837 Glycosyl hydrolases family 2, sugar binding domain NP431_21605 PF00703 Glycosyl hydrolases family 2 NP431_21605 PF02836 Glycosyl hydrolases family 2, TIM barrel domain NP431_21605 PF02929 Beta galactosidase small chain NP431_21605 PF16353 Domain of unknown function(DUF4981) NP431_21610 PF00480 ROK family NP431_21615 PF12729 Four helix bundle sensory module for signal transduction NP431_21615 PF00672 HAMP domain NP431_21615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP431_21620 PF00005 ABC transporter NP431_21620 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NP431_21625 PF12911 N-terminal TM domain of oligopeptide transport permease C NP431_21625 PF00528 Binding-protein-dependent transport system inner membrane component NP431_21630 PF00528 Binding-protein-dependent transport system inner membrane component NP431_21635 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NP431_21645 PF13186 Iron-sulfur cluster-binding domain NP431_21645 PF04055 Radical SAM superfamily NP431_21650 PF00884 Sulfatase NP431_21655 PF00884 Sulfatase NP431_21655 PF16385 Domain of unknown function NP431_21660 PF01497 Periplasmic binding protein NP431_21665 PF07715 TonB-dependent Receptor Plug Domain NP431_21665 PF07660 Secretin and TonB N terminus short domain NP431_21665 PF00593 TonB dependent receptor NP431_21675 PF02653 Branched-chain amino acid transport system / permease component NP431_21680 PF00005 ABC transporter NP431_21685 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NP431_21690 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NP431_21690 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NP431_21695 PF00596 Class II Aldolase and Adducin N-terminal domain NP431_21700 PF11762 L-arabinose isomerase C-terminal domain NP431_21700 PF02610 L-arabinose isomerase NP431_21705 PF02311 AraC-like ligand binding domain NP431_21705 PF12833 Helix-turn-helix domain NP431_21710 PF01263 Aldose 1-epimerase NP431_21715 PF04616 Glycosyl hydrolases family 43 NP431_21715 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain NP431_21730 PF00528 Binding-protein-dependent transport system inner membrane component NP431_21735 PF00005 ABC transporter NP431_21740 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NP431_21745 PF00202 Aminotransferase class-III NP431_21750 PF00155 Aminotransferase class I and II NP431_21750 PF00392 Bacterial regulatory proteins, gntR family NP431_21760 PF00106 short chain dehydrogenase NP431_21765 PF00005 ABC transporter NP431_21770 PF02687 FtsX-like permease family NP431_21770 PF12704 MacB-like periplasmic core domain NP431_21785 PF02566 OsmC-like protein NP431_21790 PF01047 MarR family NP431_21795 PF10417 C-terminal domain of 1-Cys peroxiredoxin NP431_21795 PF00578 AhpC/TSA family NP431_21800 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP431_21800 PF13192 Thioredoxin domain NP431_21805 PF00884 Sulfatase NP431_21825 PF01037 Lrp/AsnC ligand binding domain NP431_21835 PF00474 Sodium:solute symporter family NP431_21845 PF00171 Aldehyde dehydrogenase family NP431_21845 PF14850 DNA-binding domain of Proline dehydrogenase NP431_21845 PF18327 Proline utilization A proline dehydrogenase N-terminal domain NP431_21845 PF01619 Proline dehydrogenase NP431_21850 PF12833 Helix-turn-helix domain NP431_21860 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region NP431_21860 PF01243 Pyridoxamine 5'-phosphate oxidase NP431_21865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP431_21865 PF02743 Cache domain NP431_21865 PF00512 His Kinase A (phospho-acceptor) domain NP431_21870 PF00158 Sigma-54 interaction domain NP431_21870 PF00072 Response regulator receiver domain NP431_21870 PF02954 Bacterial regulatory protein, Fis family NP431_21875 PF00529 HlyD membrane-fusion protein of T1SS NP431_21890 PF00005 ABC transporter NP431_21890 PF03412 Peptidase C39 family NP431_21890 PF00664 ABC transporter transmembrane region NP431_21900 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NP431_21905 PF00246 Zinc carboxypeptidase NP431_21915 PF13718 GNAT acetyltransferase 2 NP431_21915 PF05127 Helicase NP431_21920 PF08775 ParB family NP431_21920 PF02195 ParB-like nuclease domain NP431_21925 PF18607 ParA helix turn helix domain NP431_21925 PF13614 AAA domain NP431_21940 PF00005 ABC transporter NP431_21940 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NP431_21945 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NP431_21945 PF00005 ABC transporter NP431_21960 PF01709 Transcriptional regulator NP431_21970 PF00005 ABC transporter NP431_21975 PF02687 FtsX-like permease family NP431_21975 PF12704 MacB-like periplasmic core domain NP431_21990 PF07694 5TMR of 5TMR-LYT NP431_21990 PF13492 GAF domain NP431_21990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP431_21990 PF06580 Histidine kinase NP431_21995 PF04397 LytTr DNA-binding domain NP431_21995 PF00072 Response regulator receiver domain NP431_22000 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NP431_22010 PF03616 Sodium/glutamate symporter NP431_22020 PF00005 ABC transporter NP431_22035 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NP431_22050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_22050 PF03466 LysR substrate binding domain NP431_22055 PF17954 Quercetinase C-terminal cupin domain NP431_22055 PF02678 Pirin NP431_22060 PF07681 DoxX NP431_22070 PF00730 HhH-GPD superfamily base excision DNA repair protein NP431_22070 PF06029 AlkA N-terminal domain NP431_22075 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NP431_22075 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NP431_22080 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 NP431_22090 PF03600 Citrate transporter NP431_22110 PF00704 Glycosyl hydrolases family 18 NP431_22110 PF08329 Chitinase A, N-terminal domain NP431_22115 PF06865 Pyrimidine/purine nucleoside phosphorylase NP431_22125 PF00990 Diguanylate cyclase, GGDEF domain NP431_22125 PF00563 EAL domain NP431_22130 PF01554 MatE NP431_22135 PF03793 PASTA domain NP431_22135 PF00069 Protein kinase domain NP431_22140 PF00849 RNA pseudouridylate synthase NP431_22150 PF17152 Periplasmic sensor domain NP431_22150 PF00990 Diguanylate cyclase, GGDEF domain NP431_22160 PF00756 Putative esterase NP431_22165 PF08240 Alcohol dehydrogenase GroES-like domain NP431_22165 PF00107 Zinc-binding dehydrogenase NP431_22170 PF00596 Class II Aldolase and Adducin N-terminal domain NP431_22180 PF03466 LysR substrate binding domain NP431_22180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_22185 PF01614 Bacterial transcriptional regulator NP431_22185 PF09339 IclR helix-turn-helix domain NP431_22195 PF10688 Bacterial inner membrane protein NP431_22205 PF00294 pfkB family carbohydrate kinase NP431_22210 PF01081 KDPG and KHG aldolase NP431_22215 PF08021 Siderophore-interacting FAD-binding domain NP431_22215 PF04954 Siderophore-interacting protein NP431_22220 PF01810 LysE type translocator NP431_22225 PF01037 Lrp/AsnC ligand binding domain NP431_22240 PF03922 OmpW family NP431_22250 PF12706 Beta-lactamase superfamily domain NP431_22255 PF01661 Macro domain NP431_22260 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NP431_22290 PF05651 Putative sugar diacid recognition NP431_22290 PF13556 PucR C-terminal helix-turn-helix domain NP431_22290 PF17853 GGDEF-like domain NP431_22295 PF02447 GntP family permease NP431_22300 PF02595 Glycerate kinase family NP431_22315 PF03264 NapC/NirT cytochrome c family, N-terminal region NP431_22320 PF00384 Molybdopterin oxidoreductase NP431_22320 PF18364 Molybdopterin oxidoreductase N-terminal domain NP431_22320 PF01568 Molydopterin dinucleotide binding domain NP431_22330 PF02581 Thiamine monophosphate synthase NP431_22335 PF02110 Hydroxyethylthiazole kinase family NP431_22340 PF03070 TENA/THI-4/PQQC family NP431_22345 PF09084 NMT1/THI5 like NP431_22350 PF00528 Binding-protein-dependent transport system inner membrane component NP431_22355 PF00005 ABC transporter NP431_22360 PF08543 Phosphomethylpyrimidine kinase NP431_22365 PF01523 Putative modulator of DNA gyrase NP431_22370 PF01523 Putative modulator of DNA gyrase NP431_22375 PF04013 Putative SAM-dependent RNA methyltransferase NP431_22435 PF10928 Protein of unknown function (DUF2810) NP431_22440 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NP431_22440 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NP431_22450 PF03009 Glycerophosphoryl diester phosphodiesterase family NP431_22455 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NP431_22455 PF00056 lactate/malate dehydrogenase, NAD binding domain NP431_22460 PF00072 Response regulator receiver domain NP431_22460 PF00486 Transcriptional regulatory protein, C terminal NP431_22465 PF00672 HAMP domain NP431_22465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP431_22465 PF00512 His Kinase A (phospho-acceptor) domain NP431_22470 PF00593 TonB dependent receptor NP431_22470 PF07715 TonB-dependent Receptor Plug Domain NP431_22480 PF01618 MotA/TolQ/ExbB proton channel family NP431_22485 PF01618 MotA/TolQ/ExbB proton channel family NP431_22490 PF02472 Biopolymer transport protein ExbD/TolR NP431_22510 PF00326 Prolyl oligopeptidase family NP431_22510 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NP431_22515 PF07690 Major Facilitator Superfamily NP431_22520 PF00491 Arginase family NP431_22525 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NP431_22525 PF17944 Arginine decarboxylase C-terminal helical extension NP431_22525 PF17810 Arginine decarboxylase helical bundle domain NP431_22530 PF00753 Metallo-beta-lactamase superfamily NP431_22535 PF18030 RimK PreATP-grasp domain NP431_22535 PF08443 RimK-like ATP-grasp domain NP431_22540 PF18030 RimK PreATP-grasp domain NP431_22540 PF08443 RimK-like ATP-grasp domain NP431_22555 PF00990 Diguanylate cyclase, GGDEF domain NP431_22560 PF05525 Branched-chain amino acid transport protein NP431_22570 PF01266 FAD dependent oxidoreductase NP431_22585 PF07670 Nucleoside recognition NP431_22585 PF07662 Na+ dependent nucleoside transporter C-terminus NP431_22585 PF01773 Na+ dependent nucleoside transporter N-terminus NP431_22600 PF00563 EAL domain NP431_22600 PF00990 Diguanylate cyclase, GGDEF domain NP431_22600 PF03707 Bacterial signalling protein N terminal repeat NP431_22615 PF00990 Diguanylate cyclase, GGDEF domain NP431_22620 PF04244 Deoxyribodipyrimidine photo-lyase-related protein NP431_22635 PF01641 SelR domain NP431_22635 PF01625 Peptide methionine sulfoxide reductase NP431_22640 PF02566 OsmC-like protein NP431_22645 PF12464 Maltose acetyltransferase NP431_22645 PF14602 Hexapeptide repeat of succinyl-transferase NP431_22650 PF05656 Protein of unknown function (DUF805) NP431_22670 PF00005 ABC transporter NP431_22675 PF01979 Amidohydrolase family NP431_22685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_22685 PF03466 LysR substrate binding domain NP431_22690 PF13419 Haloacid dehalogenase-like hydrolase NP431_22705 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NP431_22710 PF00005 ABC transporter NP431_22710 PF02687 FtsX-like permease family NP431_22710 PF12704 MacB-like periplasmic core domain NP431_22715 PF02321 Outer membrane efflux protein NP431_22720 PF00657 GDSL-like Lipase/Acylhydrolase NP431_22725 PF05922 Peptidase inhibitor I9 NP431_22725 PF00082 Subtilase family NP431_22735 PF13419 Haloacid dehalogenase-like hydrolase NP431_22740 PF00202 Aminotransferase class-III NP431_22745 PF00266 Aminotransferase class-V NP431_22755 PF00583 Acetyltransferase (GNAT) family NP431_22755 PF01047 MarR family NP431_22760 PF00005 ABC transporter NP431_22765 PF00528 Binding-protein-dependent transport system inner membrane component NP431_22770 PF07702 UTRA domain NP431_22770 PF00392 Bacterial regulatory proteins, gntR family NP431_22780 PF01266 FAD dependent oxidoreductase NP431_22785 PF00246 Zinc carboxypeptidase NP431_22785 PF18027 Cytosolic carboxypeptidase N-terminal domain NP431_22790 PF01389 OmpA-like transmembrane domain NP431_22790 PF00691 OmpA family NP431_22795 PF03466 LysR substrate binding domain NP431_22795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_22800 PF03313 Serine dehydratase alpha chain NP431_22800 PF03315 Serine dehydratase beta chain NP431_22820 PF08264 Anticodon-binding domain of tRNA NP431_22820 PF00133 tRNA synthetases class I (I, L, M and V) NP431_22835 PF01070 FMN-dependent dehydrogenase NP431_22860 PF00581 Rhodanese-like domain NP431_22865 PF00166 Chaperonin 10 Kd subunit NP431_22870 PF00118 TCP-1/cpn60 chaperonin family NP431_22875 PF01810 LysE type translocator NP431_22880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_22880 PF03466 LysR substrate binding domain NP431_22890 PF12833 Helix-turn-helix domain NP431_22895 PF06751 Ethanolamine ammonia lyase large subunit (EutB) NP431_22900 PF05985 Ethanolamine ammonia-lyase light chain (EutC) NP431_22905 PF13520 Amino acid permease NP431_22910 PF01641 SelR domain NP431_22910 PF01625 Peptide methionine sulfoxide reductase NP431_22920 PF00857 Isochorismatase family NP431_22930 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain NP431_22930 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family NP431_22945 PF00892 EamA-like transporter family NP431_22950 PF03466 LysR substrate binding domain NP431_22950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_22955 PF17185 NlpE C-terminal OB domain NP431_22955 PF04170 NlpE N-terminal domain NP431_22960 PF02001 Protein of unknown function DUF134 NP431_22980 PF03144 Elongation factor Tu domain 2 NP431_22980 PF00679 Elongation factor G C-terminus NP431_22980 PF14492 Elongation Factor G, domain II NP431_22980 PF03764 Elongation factor G, domain IV NP431_22980 PF00009 Elongation factor Tu GTP binding domain NP431_22985 PF11471 Maltoporin periplasmic N-terminal extension NP431_22985 PF02264 LamB porin NP431_22995 PF00376 MerR family regulatory protein NP431_22995 PF09278 MerR, DNA binding NP431_23015 PF13091 PLD-like domain NP431_23020 PF00529 HlyD membrane-fusion protein of T1SS NP431_23020 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NP431_23025 PF00873 AcrB/AcrD/AcrF family NP431_23040 PF00005 ABC transporter NP431_23040 PF08402 TOBE domain NP431_23065 PF07702 UTRA domain NP431_23065 PF00392 Bacterial regulatory proteins, gntR family NP431_23070 PF02028 BCCT, betaine/carnitine/choline family transporter NP431_23085 PF00873 AcrB/AcrD/AcrF family NP431_23095 PF03466 LysR substrate binding domain NP431_23095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_23100 PF13416 Bacterial extracellular solute-binding protein NP431_23105 PF00579 tRNA synthetases class I (W and Y) NP431_23110 PF00196 Bacterial regulatory proteins, luxR family NP431_23120 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NP431_23120 PF02896 PEP-utilising enzyme, TIM barrel domain NP431_23120 PF00391 PEP-utilising enzyme, mobile domain NP431_23125 PF03618 Kinase/pyrophosphorylase NP431_23130 PF00709 Adenylosuccinate synthetase NP431_23135 PF03466 LysR substrate binding domain NP431_23135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_23145 PF00501 AMP-binding enzyme NP431_23145 PF13193 AMP-binding enzyme C-terminal domain NP431_23150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP431_23150 PF00512 His Kinase A (phospho-acceptor) domain NP431_23150 PF00989 PAS fold NP431_23155 PF00196 Bacterial regulatory proteins, luxR family NP431_23155 PF00072 Response regulator receiver domain NP431_23160 PF07690 Major Facilitator Superfamily NP431_23165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_23165 PF03466 LysR substrate binding domain NP431_23175 PF00892 EamA-like transporter family NP431_23190 PF17876 Cold shock domain NP431_23190 PF08461 Ribonuclease R winged-helix domain NP431_23190 PF00773 RNB domain NP431_23190 PF00575 S1 RNA binding domain NP431_23190 PF08206 Ribonuclease B OB domain NP431_23195 PF00313 'Cold-shock' DNA-binding domain NP431_23205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_23205 PF03466 LysR substrate binding domain NP431_23210 PF00155 Aminotransferase class I and II NP431_23215 PF00497 Bacterial extracellular solute-binding proteins, family 3 NP431_23225 PF00860 Permease family NP431_23235 PF00576 HIUase/Transthyretin family NP431_23255 PF00111 2Fe-2S iron-sulfur cluster binding domain NP431_23255 PF01799 [2Fe-2S] binding domain NP431_23260 PF08362 YcdC-like protein, C-terminal region NP431_23260 PF00440 Bacterial regulatory proteins, tetR family NP431_23265 PF03358 NADPH-dependent FMN reductase NP431_23285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_23285 PF03466 LysR substrate binding domain NP431_23290 PF00221 Aromatic amino acid lyase NP431_23295 PF17391 Urocanase N-terminal domain NP431_23295 PF17392 Urocanase C-terminal domain NP431_23295 PF01175 Urocanase Rossmann-like domain NP431_23300 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) NP431_23305 PF00202 Aminotransferase class-III NP431_23310 PF00171 Aldehyde dehydrogenase family NP431_23315 PF01037 Lrp/AsnC ligand binding domain NP431_23320 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family NP431_23325 PF01321 Creatinase/Prolidase N-terminal domain NP431_23325 PF00557 Metallopeptidase family M24 NP431_23330 PF00356 Bacterial regulatory proteins, lacI family NP431_23335 PF13419 Haloacid dehalogenase-like hydrolase NP431_23340 PF00232 Glycosyl hydrolase family 1 NP431_23345 PF00367 phosphotransferase system, EIIB NP431_23345 PF02378 Phosphotransferase system, EIIC NP431_23345 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NP431_23350 PF00232 Glycosyl hydrolase family 1 NP431_23370 PF08240 Alcohol dehydrogenase GroES-like domain NP431_23370 PF00107 Zinc-binding dehydrogenase NP431_23375 PF03466 LysR substrate binding domain NP431_23375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP431_23385 PF00270 DEAD/DEAH box helicase NP431_23385 PF00271 Helicase conserved C-terminal domain NP431_23395 PF03099 Biotin/lipoate A/B protein ligase family NP431_23425 PF02798 Glutathione S-transferase, N-terminal domain NP431_23435 PF00462 Glutaredoxin NP431_23435 PF08534 Redoxin NP431_23440 PF00962 Adenosine/AMP deaminase