locus-tag	class	description
BA893_00010	COG0592	DNA-directed DNA polymerase activity
BA893_00015	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
BA893_00020	COG0187	DNA topoisomerase II activity
BA893_00030	COG0071	Belongs to the small heat shock protein (HSP20) family
BA893_00035	COG3977	Valine--pyruvate aminotransferase
BA893_00040	COG0366	Alpha amylase catalytic
BA893_00045	COG0751	glycine-tRNA ligase activity
BA893_00055	COG2119	membrane
BA893_00065	COG0425	Belongs to the sulfur carrier protein TusA family
BA893_00080	COG0604	alcohol dehydrogenase
BA893_00085	COG0183	Belongs to the thiolase family
BA893_00090	COG1250	3-hydroxyacyl-CoA dehydrogenase
BA893_00090	COG1024	Enoyl-CoA hydratase
BA893_00095	COG1739	Uncharacterized protein family UPF0029
BA893_00100	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
BA893_00145	COG0583	DNA-binding transcription factor activity
BA893_00150	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
BA893_00155	COG2960	long-chain fatty acid transporting porin activity
BA893_00160	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BA893_00165	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BA893_00170	COG1309	transcriptional regulator
BA893_00215	COG4172	Belongs to the ABC transporter superfamily
BA893_00220	COG4166	transmembrane transport
BA893_00230	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BA893_00240	COG1609	Transcriptional regulator
BA893_00245	COG0129	dihydroxy-acid dehydratase activity
BA893_00250	COG3265	gluconokinase activity
BA893_00255	COG2610	gluconate transmembrane transporter activity
BA893_00260	COG0800	Aldolase
BA893_00265	COG3721	Heme iron utilization protein
BA893_00270	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BA893_00275	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
BA893_00285	COG1522	sequence-specific DNA binding
BA893_00290	COG0742	ribosomal rna small subunit methyltransferase
BA893_00300	COG0697	spore germination
BA893_00305	COG0589	response to stress
BA893_00310	COG1528	Iron-storage protein
BA893_00320	COG2081	HI0933 family
BA893_00345	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
BA893_00350	COG0732	type I restriction modification DNA specificity domain
BA893_00365	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
BA893_00410	COG0235	Class ii aldolase
BA893_00415	COG3395	kinase activity
BA893_00430	COG3181	Tripartite tricarboxylate transporter family receptor
BA893_00435	COG0473	3-isopropylmalate dehydrogenase activity
BA893_00450	COG2814	Major facilitator Superfamily
BA893_00455	COG0583	DNA-binding transcription factor activity
BA893_00460	COG1522	sequence-specific DNA binding
BA893_00465	COG2962	Rard protein
BA893_00475	COG1028	Short-chain dehydrogenase reductase Sdr
BA893_00485	COG0583	DNA-binding transcription factor activity
BA893_00510	COG0515	serine threonine protein kinase
BA893_00510	COG1262	PFAM Formylglycine-generating sulfatase enzyme
BA893_00575	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
BA893_00600	COG1028	Short-chain dehydrogenase reductase Sdr
BA893_00630	COG4964	Belongs to the GSP D family
BA893_00680	COG0748	coenzyme F420 binding
BA893_00690	COG4988	ABC transporter
BA893_00695	COG1132	(ABC) transporter
BA893_00715	COG1322	Protein conserved in bacteria
BA893_00720	COG2226	methyltransferase
BA893_00725	COG3165	ubiquinone biosynthetic process from chorismate
BA893_00730	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
BA893_00745	COG0805	protein transport
BA893_00750	COG3263	regulation of cellular component size
BA893_00755	COG0084	hydrolase, TatD family'
BA893_00775	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BA893_00775	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BA893_00780	COG0218	Necessary for normal cell division and for the maintenance of normal septation
BA893_00805	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BA893_00810	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
BA893_00820	COG2204	response regulator
BA893_00825	COG3852	Histidine kinase
BA893_00835	COG0174	glutamine synthetase
BA893_00855	COG1295	ribonuclease BN
BA893_00860	COG1490	D-aminoacyl-tRNA deacylase activity
BA893_00865	COG0456	acetyltransferase
BA893_00875	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
BA893_00880	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
BA893_00885	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
BA893_00890	COG3031	protein transport across the cell outer membrane
BA893_00900	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
BA893_00905	COG1459	type II secretion system
BA893_00910	COG2165	general secretion pathway protein
BA893_00915	COG2165	general secretion pathway protein
BA893_00920	COG2165	general secretion pathway protein
BA893_00925	COG4795	General secretion pathway protein
BA893_00930	COG3156	type II secretion system protein K
BA893_00935	COG3297	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
BA893_00940	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
BA893_00950	COG1218	3'(2'),5'-bisphosphate nucleotidase
BA893_00955	COG0494	nUDIX hydrolase
BA893_00965	COG1040	competence protein
BA893_00970	COG0596	Alpha beta hydrolase
BA893_00980	COG2183	response to ionizing radiation
BA893_00990	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BA893_01000	COG0745	RESPONSE REGULATOR receiver
BA893_01010	COG2233	PERMEase
BA893_01015	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
BA893_01020	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BA893_01025	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BA893_01030	COG1758	RNA polymerase activity
BA893_01035	COG0194	GDP metabolic process
BA893_01050	COG0848	biopolymer transport protein
BA893_01055	COG0811	peptide transport
BA893_01075	COG4174	ABC transporter (Permease)
BA893_01080	COG4239	(ABC) transporter, permease
BA893_01085	COG0747	negative chemotaxis
BA893_01120	COG1561	YicC-like family, N-terminal region
BA893_01125	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
BA893_01130	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
BA893_01135	COG1560	Kdo2-lipid A biosynthetic process
BA893_01140	COG1309	transcriptional regulator
BA893_01145	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BA893_01150	COG0840	transmembrane signaling receptor activity
BA893_01155	COG2003	Belongs to the UPF0758 family
BA893_01175	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
BA893_01190	COG0438	transferase activity, transferring glycosyl groups
BA893_01195	COG0463	Glycosyl transferase, family 2
BA893_01200	COG0859	PFAM glycosyl transferase family 9
BA893_01205	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
BA893_01210	COG3642	lipopolysaccharide core region biosynthetic process
BA893_01215	COG1086	Polysaccharide biosynthesis protein
BA893_01220	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
BA893_01225	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
BA893_01230	COG2089	acid synthase
BA893_01240	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
BA893_01245	COG1083	cytidylyl-transferase
BA893_01255	COG1519	Transferase
BA893_01260	COG0859	PFAM glycosyl transferase family 9
BA893_01265	COG1560	Kdo2-lipid A biosynthetic process
BA893_01275	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BA893_01345	COG0438	transferase activity, transferring glycosyl groups
BA893_01355	COG0110	maltose O-acetyltransferase activity
BA893_01360	COG0438	transferase activity, transferring glycosyl groups
BA893_01370	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BA893_01385	COG3206	protein involved in exopolysaccharide biosynthesis
BA893_01385	COG0489	protein tyrosine kinase activity
BA893_01425	COG0438	transferase activity, transferring glycosyl groups
BA893_01430	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
BA893_01440	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
BA893_01460	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
BA893_01465	COG0149	triose-phosphate isomerase activity
BA893_01475	COG3152	Membrane
BA893_01490	COG1494	fructose-1,6-bisphosphatase
BA893_01500	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
BA893_01505	COG1575	Belongs to the MenA family. Type 1 subfamily
BA893_01510	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
BA893_01525	COG1609	Transcriptional regulator
BA893_01530	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
BA893_01535	COG0254	rRNA binding
BA893_01545	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
BA893_01550	COG0088	Forms part of the polypeptide exit tunnel
BA893_01560	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
BA893_01565	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
BA893_01570	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
BA893_01575	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
BA893_01585	COG0255	Belongs to the universal ribosomal protein uL29 family
BA893_01590	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
BA893_01600	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
BA893_01605	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
BA893_01620	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
BA893_01635	COG1841	ribosomal large subunit assembly
BA893_01645	COG0201	protein transport
BA893_01655	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
BA893_01660	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
BA893_01675	COG0203	ribosomal protein L17
BA893_01685	COG0545	Peptidyl-prolyl cis-trans isomerase
BA893_01695	COG2153	protein acetylation
BA893_01700	COG0513	Belongs to the DEAD box helicase family
BA893_01710	COG0737	Belongs to the 5'-nucleotidase family
BA893_01715	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
BA893_01715	COG1648	precorrin-2 dehydrogenase activity
BA893_01720	COG0175	sulfate reduction
BA893_01725	COG2895	sulfate adenylyltransferase (ATP) activity
BA893_01735	COG3273	potassium ion transport
BA893_01735	COG0471	metal ion transport
BA893_01740	COG0529	Catalyzes the synthesis of activated sulfate
BA893_01760	COG1136	(ABC) transporter
BA893_01775	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
BA893_01785	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BA893_01795	COG2911	Protein conserved in bacteria
BA893_01800	COG2105	PFAM AIG2 family protein
BA893_01805	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
BA893_01810	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
BA893_01815	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
BA893_01820	COG0163	prenyltransferase activity
BA893_01825	COG4143	(ABC) transporter
BA893_01830	COG1178	ABC-type Fe3 transport system permease component
BA893_01835	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
BA893_01840	COG0589	response to stress
BA893_01860	COG0039	L-malate dehydrogenase activity
BA893_01870	COG0142	geranyltranstransferase activity
BA893_01875	COG0261	This protein binds to 23S rRNA in the presence of protein L20
BA893_01885	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
BA893_01890	COG2966	Psort location CytoplasmicMembrane, score
BA893_01900	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
BA893_01910	COG2967	ApaG domain
BA893_01915	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
BA893_01920	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
BA893_01925	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BA893_01930	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
BA893_01935	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
BA893_01945	COG0066	3-isopropylmalate dehydratase activity
BA893_01955	COG0473	3-isopropylmalate dehydrogenase activity
BA893_01960	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BA893_01970	COG0671	phosphoesterase, PA-phosphatase related
BA893_01980	COG0583	DNA-binding transcription factor activity
BA893_01985	COG1022	Amp-dependent synthetase and ligase
BA893_01990	COG0028	Belongs to the TPP enzyme family
BA893_01995	COG0440	acetolactate synthase activity
BA893_02000	COG0469	pyruvate kinase activity
BA893_02005	COG1349	DNA-binding transcription factor activity
BA893_02010	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
BA893_02020	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BA893_02020	COG1263	PTS System
BA893_02025	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
BA893_02030	COG3722	fumarate hydratase activity
BA893_02035	COG0246	Mannitol dehydrogenase
BA893_02040	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
BA893_02040	COG2213	PTS system mannitol-specific
BA893_02075	COG1464	Belongs to the NlpA lipoprotein family
BA893_02080	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BA893_02095	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BA893_02100	COG0358	DNA primase activity
BA893_02105	COG1610	YqeY-like protein
BA893_02110	COG0828	Belongs to the bacterial ribosomal protein bS21 family
BA893_02115	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
BA893_02120	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
BA893_02125	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
BA893_02130	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
BA893_02135	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
BA893_02140	COG1968	undecaprenyl-diphosphatase activity
BA893_02145	COG0617	tRNA 3'-terminal CCA addition
BA893_02150	COG3267	Type II secretory pathway component ExeA
BA893_02150	COG3409	Peptidoglycan-binding domain 1 protein
BA893_02160	COG4991	sh3 domain protein
BA893_02165	COG0306	phosphate transporter
BA893_02170	COG1392	Phosphate transport regulator
BA893_02175	COG3025	triphosphatase activity
BA893_02190	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
BA893_02200	COG1538	Outer membrane efflux protein
BA893_02205	COG0494	nUDIX hydrolase
BA893_02210	COG3151	Protein conserved in bacteria
BA893_02220	COG3150	esterase
BA893_02225	COG0187	DNA topoisomerase II activity
BA893_02230	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BA893_02235	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BA893_02245	COG3105	Protein conserved in bacteria
BA893_02250	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
BA893_02255	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
BA893_02260	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
BA893_02265	COG0723	plastoquinol--plastocyanin reductase activity
BA893_02270	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
BA893_02275	COG2857	Cytochrome c1
BA893_02280	COG0625	glutathione transferase activity
BA893_02285	COG2969	positive regulation of protein catabolic process
BA893_02290	COG2823	Periplasmic or secreted lipoprotein
BA893_02295	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
BA893_02310	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
BA893_02320	COG0275	rRNA processing
BA893_02325	COG3116	cell division
BA893_02330	COG0768	penicillin binding
BA893_02335	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
BA893_02340	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
BA893_02345	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BA893_02350	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
BA893_02355	COG0772	Belongs to the SEDS family
BA893_02360	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
BA893_02365	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
BA893_02370	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
BA893_02375	COG0849	cell division
BA893_02380	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
BA893_02385	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
BA893_02395	COG0653	protein targeting
BA893_02400	COG0494	nUDIX hydrolase
BA893_02410	COG0505	Belongs to the CarA family
BA893_02415	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
BA893_02420	COG0730	response to heat
BA893_02425	COG0583	DNA-binding transcription factor activity
BA893_02430	COG2860	membrane
BA893_02435	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BA893_02445	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
BA893_02455	COG0493	'glutamate synthase
BA893_02460	COG0070	glutamate synthase
BA893_02460	COG0067	glutamate synthase
BA893_02460	COG0069	glutamate synthase activity
BA893_02470	COG0067	glutamate synthase
BA893_02470	COG0070	glutamate synthase
BA893_02470	COG0069	glutamate synthase activity
BA893_02475	COG1242	4 iron, 4 sulfur cluster binding
BA893_02480	COG5002	protein histidine kinase activity
BA893_02480	COG2198	Histidine kinase
BA893_02480	COG0784	Response regulator, receiver
BA893_02490	COG0745	RESPONSE REGULATOR receiver
BA893_02500	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
BA893_02515	COG0083	homoserine kinase activity
BA893_02520	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
BA893_02525	COG3445	Acts as a radical domain for damaged PFL and possibly other radical proteins
BA893_02530	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
BA893_02535	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
BA893_02550	COG1115	amino acid carrier protein
BA893_02555	COG3022	response to hydroperoxide
BA893_02560	COG0513	Belongs to the DEAD box helicase family
BA893_02565	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
BA893_02575	COG0716	FMN binding
BA893_02585	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
BA893_02590	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
BA893_02595	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
BA893_02600	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
BA893_02605	COG3829	transcription factor binding
BA893_02605	COG3290	protein histidine kinase activity
BA893_02615	COG0667	Aldo Keto reductase
BA893_02625	COG3066	DNA modification
BA893_02640	COG0730	response to heat
BA893_02645	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
BA893_02650	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
BA893_02660	COG1283	sodium-dependent phosphate transmembrane transporter activity
BA893_02665	COG0583	DNA-binding transcription factor activity
BA893_02670	COG0640	Transcriptional regulator
BA893_02675	COG0268	Binds directly to 16S ribosomal RNA
BA893_02680	COG0728	peptidoglycan biosynthetic process
BA893_02685	COG0196	riboflavin kinase activity
BA893_02690	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
BA893_02695	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
BA893_02700	COG1047	Peptidyl-prolyl cis-trans
BA893_02705	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
BA893_02710	COG3279	Response regulator of the LytR AlgR family
BA893_02715	COG3275	phosphorelay sensor kinase activity
BA893_02720	COG1966	Carbon starvation protein
BA893_02740	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
BA893_02745	COG1472	Belongs to the glycosyl hydrolase 3 family
BA893_02750	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
BA893_02755	COG1605	Chorismate mutase
BA893_02755	COG0287	Prephenate dehydrogenase
BA893_02760	COG0739	heme binding
BA893_02765	COG0488	(ABC) transporter
BA893_02775	COG2973	This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon (5'- ACTAGT-'3') and prevents the initiation of transcription. The complex also regulates trp repressor biosynthesis by binding to its regulatory region
BA893_02780	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
BA893_02785	COG0077	Prephenate dehydratase
BA893_02785	COG1605	Chorismate mutase
BA893_02790	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
BA893_02795	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
BA893_02800	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BA893_02805	COG0564	pseudouridine synthase activity
BA893_02815	COG0542	response to heat
BA893_02830	COG1116	anion transmembrane transporter activity
BA893_02895	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
BA893_02905	COG2974	May be involved in recombination
BA893_02915	COG0745	RESPONSE REGULATOR receiver
BA893_02920	COG5002	protein histidine kinase activity
BA893_02930	COG0248	Ppx GppA phosphatase
BA893_02935	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
BA893_02945	COG0581	inorganic phosphate transmembrane transporter activity
BA893_02950	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
BA893_02955	COG0704	Plays a role in the regulation of phosphate uptake
BA893_02965	COG3142	Participates in the control of copper homeostasis
BA893_02970	COG0450	alkyl hydroperoxide reductase
BA893_02975	COG0583	DNA-binding transcription factor activity
BA893_02980	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
BA893_02990	COG0517	IMP dehydrogenase activity
BA893_03000	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
BA893_03005	COG0343	queuine tRNA-ribosyltransferase activity
BA893_03010	COG1862	Preprotein translocase
BA893_03015	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BA893_03020	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BA893_03025	COG0483	inositol monophosphate 1-phosphatase activity
BA893_03030	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
BA893_03040	COG1104	cysteine desulfurase activity
BA893_03045	COG0822	iron-sulfur transferase activity
BA893_03060	COG0443	Heat shock 70 kDa protein
BA893_03065	COG0633	Ferredoxin
BA893_03070	COG2975	iron-sulfur cluster assembly
BA893_03075	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
BA893_03080	COG0105	UTP biosynthetic process
BA893_03095	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
BA893_03105	COG2976	Protein conserved in bacteria
BA893_03110	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BA893_03115	COG1160	GTP binding
BA893_03135	COG0517	IMP dehydrogenase activity
BA893_03135	COG0516	GMP reductase activity
BA893_03140	COG0518	GMP synthase (glutamine-hydrolyzing) activity
BA893_03140	COG0519	Catalyzes the synthesis of GMP from XMP
BA893_03155	COG1584	GPR1 FUN34 yaaH family protein
BA893_03170	COG1473	amidohydrolase
BA893_03180	COG1115	amino acid carrier protein
BA893_03185	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BA893_03195	COG2873	o-acetylhomoserine
BA893_03200	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BA893_03220	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BA893_03220	COG3153	acetyltransferase
BA893_03225	COG0583	DNA-binding transcription factor activity
BA893_03230	COG0235	Class ii aldolase
BA893_03235	COG4806	L-rhamnose isomerase
BA893_03240	COG1070	Carbohydrate kinase
BA893_03245	COG3254	rhamnose metabolic process
BA893_03275	COG1404	Belongs to the peptidase S8 family
BA893_03290	COG3850	Histidine kinase
BA893_03370	COG0582	viral genome integration into host DNA
BA893_03380	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
BA893_03385	COG2867	negative regulation of translational initiation
BA893_03390	COG2914	Belongs to the UPF0125 (RnfH) family
BA893_03395	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BA893_03400	COG0497	DNA recombination
BA893_03405	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
BA893_03410	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
BA893_03415	COG1301	dicarboxylic acid transport
BA893_03425	COG0484	heat shock protein binding
BA893_03455	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
BA893_03460	COG0590	tRNA wobble adenosine to inosine editing
BA893_03465	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
BA893_03470	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BA893_03470	COG0047	phosphoribosylformylglycinamidine synthase activity
BA893_03495	COG2195	Cleaves the N-terminal amino acid of tripeptides
BA893_03500	COG2252	PERMEase
BA893_03505	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
BA893_03520	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
BA893_03525	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
BA893_03530	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
BA893_03535	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BA893_03535	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BA893_03560	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
BA893_03565	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
BA893_03575	COG0142	geranyltranstransferase activity
BA893_03585	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
BA893_03590	COG2885	chlorophyll binding
BA893_03595	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BA893_03595	COG0301	tRNA thio-modification
BA893_03600	COG0583	DNA-binding transcription factor activity
BA893_03610	COG2363	Small membrane protein
BA893_03615	COG2933	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
BA893_03620	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BA893_03625	COG1611	Belongs to the LOG family
BA893_03630	COG3706	GGDEF domain
BA893_03630	COG0745	RESPONSE REGULATOR receiver
BA893_03640	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
BA893_03640	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
BA893_03650	COG5595	Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310)
BA893_03655	COG1464	Belongs to the NlpA lipoprotein family
BA893_03660	COG2011	ABC-type metal ion transport system permease component
BA893_03665	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
BA893_03670	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
BA893_03680	COG1263	PTS System
BA893_03680	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BA893_03685	COG0366	Alpha amylase catalytic
BA893_03695	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
BA893_03700	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
BA893_03705	COG0321	lipoyl(octanoyl) transferase activity
BA893_03715	COG1686	Belongs to the peptidase S11 family
BA893_03720	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
BA893_03725	COG0772	Belongs to the SEDS family
BA893_03730	COG0768	penicillin binding
BA893_03740	COG0799	negative regulation of ribosome biogenesis
BA893_03745	COG1466	dna polymerase III delta subunit
BA893_03750	COG2980	Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane
BA893_03755	COG0495	leucyl-tRNA aminoacylation
BA893_03760	COG2888	peptidyl-tyrosine sulfation
BA893_03765	COG0815	Transfers the fatty acyl group on membrane lipoproteins
BA893_03770	COG4535	Mg2 and Co2 transporter CorC
BA893_03780	COG1702	phosphate starvation-inducible protein PhoH
BA893_03785	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
BA893_03790	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BA893_03900	COG0012	GTP binding
BA893_03910	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BA893_03915	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
BA893_03920	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
BA893_03925	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
BA893_03935	COG2890	protein-(glutamine-N5) methyltransferase activity
BA893_03940	COG3094	Invasion gene expression up-regulator, SirB
BA893_03945	COG2912	Transglutaminase-like superfamily
BA893_03950	COG2877	3-deoxy-8-phosphooctulonate synthase activity
BA893_03955	COG0737	Belongs to the 5'-nucleotidase family
BA893_03960	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BA893_03965	COG1187	pseudouridine synthase activity
BA893_03970	COG2840	Smr protein MutS2
BA893_04000	COG2608	mercury ion transmembrane transporter activity
BA893_04000	COG2217	Heavy metal translocating P-type atpase
BA893_04055	COG0784	Response regulator, receiver
BA893_04055	COG0835	chemotaxis
BA893_04060	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
BA893_04065	COG1815	bacterial-type flagellum-dependent cell motility
BA893_04070	COG1558	bacterial-type flagellum-dependent cell motility
BA893_04075	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
BA893_04080	COG1749	Flagellar hook protein flgE
BA893_04085	COG4787	bacterial-type flagellum-dependent cell motility
BA893_04090	COG4786	Flagellar basal body rod
BA893_04095	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
BA893_04100	COG1706	bacterial-type flagellum-dependent cell motility
BA893_04105	COG3951	Flagellar rod assembly protein muramidase FlgJ
BA893_04105	COG1705	Flagellar rod assembly protein muramidase FlgJ
BA893_04115	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BA893_04120	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BA893_04125	COG2190	(PTS) system
BA893_04130	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BA893_04135	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BA893_04140	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
BA893_04145	COG2981	High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway
BA893_04150	COG3115	cell septum assembly
BA893_04155	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
BA893_04175	COG0330	HflC and HflK could
BA893_04180	COG3118	belongs to the thioredoxin family
BA893_04185	COG0300	oxidoreductase activity
BA893_04190	COG1090	epimerase
BA893_04220	COG0622	Phosphoesterase
BA893_04240	COG3710	Transcriptional regulator
BA893_04245	COG0326	Molecular chaperone. Has ATPase activity
BA893_04255	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
BA893_04260	COG3104	oligopeptide transport
BA893_04265	COG0250	Participates in transcription elongation, termination and antitermination
BA893_04270	COG0367	asparagine synthase
BA893_04280	COG1940	carbohydrate kinase activity
BA893_04280	COG1846	Transcriptional regulator
BA893_04285	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
BA893_04290	COG2190	(PTS) system
BA893_04290	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BA893_04290	COG1263	PTS System
BA893_04295	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
BA893_04300	COG0735	belongs to the Fur family
BA893_04310	COG0716	FMN binding
BA893_04320	COG0596	Alpha beta hydrolase
BA893_04330	COG0033	Phosphoglucomutase
BA893_04340	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
BA893_04350	COG2009	succinate dehydrogenase
BA893_04355	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
BA893_04360	COG1053	succinate dehydrogenase
BA893_04370	COG0567	Dehydrogenase, E1 component
BA893_04375	COG0508	dehydrogenase complex catalyzes the overall conversion of
BA893_04380	COG0045	succinate-CoA ligase (ADP-forming) activity
BA893_04390	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BA893_04395	COG1121	(ABC) transporter
BA893_04400	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
BA893_04405	COG4977	sequence-specific DNA binding
BA893_04410	COG2963	transposase activity
BA893_04415	COG2801	Transposase and inactivated derivatives
BA893_04420	COG1918	ferrous iron import across plasma membrane
BA893_04440	COG0018	arginyl-trna synthetase
BA893_04445	COG3102	Protein conserved in bacteria
BA893_04460	COG0788	formyltetrahydrofolate deformylase activity
BA893_04465	COG1199	ATP-dependent helicase activity
BA893_04470	COG1214	PFAM Peptidase M22, glycoprotease
BA893_04485	COG2267	carboxylic ester hydrolase activity
BA893_04490	COG0318	PFAM AMP-dependent synthetase and ligase
BA893_04495	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
BA893_04500	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
BA893_04505	COG2894	cell division
BA893_04520	COG2951	lytic endotransglycosylase activity
BA893_04525	COG0583	DNA-binding transcription factor activity
BA893_04530	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BA893_04535	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
BA893_04545	COG1028	Short-chain dehydrogenase reductase Sdr
BA893_04555	COG1169	isochorismate synthase
BA893_04560	COG1021	2,3-dihydroxybenzoate-AMP ligase
BA893_04565	COG3433	isochorismatase activity
BA893_04565	COG1535	isochorismatase
BA893_04570	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BA893_04585	COG4771	TonB-dependent receptor
BA893_04590	COG1253	flavin adenine dinucleotide binding
BA893_04595	COG0513	Belongs to the DEAD box helicase family
BA893_04600	COG0569	domain protein
BA893_04605	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
BA893_04615	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
BA893_04620	COG0745	RESPONSE REGULATOR receiver
BA893_04640	COG0395	ABC-type sugar transport system, permease component
BA893_04645	COG3842	ATPase activity
BA893_04650	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BA893_04655	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
BA893_04660	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
BA893_04670	COG2204	response regulator
BA893_04695	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
BA893_04700	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
BA893_04705	COG0776	regulation of translation
BA893_04710	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BA893_04715	COG1555	photosystem II stabilization
BA893_04730	COG0232	Belongs to the dGTPase family. Type 2 subfamily
BA893_04735	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
BA893_04740	COG0436	Aminotransferase
BA893_04745	COG1169	isochorismate synthase
BA893_04750	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
BA893_04755	COG0596	Alpha beta hydrolase
BA893_04760	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
BA893_04765	COG1441	menaquinone biosynthetic process
BA893_04780	COG2855	membrane
BA893_04785	COG0477	Major facilitator Superfamily
BA893_04825	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BA893_04830	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BA893_04845	COG1522	sequence-specific DNA binding
BA893_04850	COG1946	Acyl-CoA thioesterase
BA893_04855	COG3126	Type III secretion system lipoprotein chaperone (YscW)
BA893_04920	COG0110	maltose O-acetyltransferase activity
BA893_04925	COG1609	Transcriptional regulator
BA893_04930	COG0561	phosphatase activity
BA893_04935	COG1349	DNA-binding transcription factor activity
BA893_04965	COG1074	ATP-dependent DNA helicase activity
BA893_04980	COG1742	UPF0060 membrane protein
BA893_04985	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
BA893_04985	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
BA893_05010	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BA893_05025	COG0697	spore germination
BA893_05030	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BA893_05035	COG3344	reverse transcriptase
BA893_05045	COG3344	reverse transcriptase
BA893_05095	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BA893_05100	COG0519	Catalyzes the synthesis of GMP from XMP
BA893_05115	COG1279	arginine transmembrane transporter activity
BA893_05120	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BA893_05125	COG1280	lysine exporter protein (LysE YggA)
BA893_05130	COG2076	Multidrug Resistance protein
BA893_05135	COG0583	DNA-binding transcription factor activity
BA893_05145	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BA893_05150	COG0174	glutamine synthetase
BA893_05155	COG0174	glutamine synthetase
BA893_05165	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
BA893_05170	COG3842	ATPase activity
BA893_05175	COG1176	ABC-type spermidine putrescine transport system, permease component I
BA893_05180	COG1177	transmembrane transport
BA893_05190	COG1012	belongs to the aldehyde dehydrogenase family
BA893_05195	COG0519	Catalyzes the synthesis of GMP from XMP
BA893_05200	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BA893_05205	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
BA893_05210	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
BA893_05215	COG0517	IMP dehydrogenase activity
BA893_05215	COG0516	GMP reductase activity
BA893_05240	COG0537	adenosine 5'-monophosphoramidase activity
BA893_05265	COG3150	esterase
BA893_05270	COG1252	NADH dehydrogenase
BA893_05285	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
BA893_05295	COG4591	ABC-type transport system involved in lipoprotein release permease component
BA893_05300	COG1136	(ABC) transporter
BA893_05305	COG4591	ABC-type transport system involved in lipoprotein release permease component
BA893_05315	COG0658	competence protein
BA893_05315	COG2333	competence protein COMEC
BA893_05320	COG1132	(ABC) transporter
BA893_05335	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
BA893_05340	COG2719	SpoVR family
BA893_05345	COG2718	Belongs to the UPF0229 family
BA893_05350	COG2766	serine protein kinase
BA893_05355	COG3013	Belongs to the UPF0304 family
BA893_05365	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BA893_05375	COG1882	Formate acetyltransferase
BA893_05400	COG4215	(ABC) transporter
BA893_05410	COG0708	Exodeoxyribonuclease III
BA893_05420	COG0583	DNA-binding transcription factor activity
BA893_05430	COG1346	cytolysis
BA893_05445	COG0730	response to heat
BA893_05450	COG1199	ATP-dependent helicase activity
BA893_05460	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
BA893_05465	COG1187	pseudouridine synthase activity
BA893_05475	COG1278	Cold shock
BA893_05480	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
BA893_05485	COG0542	response to heat
BA893_05490	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
BA893_05495	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
BA893_05500	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
BA893_05510	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
BA893_05520	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BA893_05525	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
BA893_05530	COG0297	glycogen (starch) synthase activity
BA893_05550	COG3070	regulator of competence-specific genes
BA893_05555	COG1609	Transcriptional regulator
BA893_05560	COG3381	protein complex oligomerization
BA893_05565	COG0745	RESPONSE REGULATOR receiver
BA893_05570	COG1434	Gram-negative-bacterium-type cell wall biogenesis
BA893_05575	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
BA893_05580	COG3006	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Not required for mini-F plasmid partitioning. Probably acts via its interaction with MukB and MukE. Overexpression results in anucleate cells. It has a calcium binding activity
BA893_05585	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
BA893_05590	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
BA893_05620	COG0189	ligase activity
BA893_05620	COG4067	protein conserved in archaea
BA893_05625	COG0500	methyltransferase
BA893_05630	COG4106	trans-aconitate 2-methyltransferase activity
BA893_05635	COG1801	Protein of unknown function DUF72
BA893_05645	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
BA893_05650	COG0632	four-way junction helicase activity
BA893_05655	COG2255	four-way junction helicase activity
BA893_05660	COG1271	oxidase subunit
BA893_05665	COG1294	oxidase, subunit
BA893_05670	COG4890	Cyd operon protein YbgT
BA893_05680	COG0824	Thioesterase
BA893_05685	COG0811	peptide transport
BA893_05700	COG0823	Involved in the tonB-independent uptake of proteins
BA893_05705	COG2885	chlorophyll binding
BA893_05710	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
BA893_05715	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
BA893_05725	COG3766	membrane
BA893_05735	COG0754	glutathionylspermidine amidase activity
BA893_05750	COG1858	cytochrome C peroxidase
BA893_05770	COG0784	Response regulator, receiver
BA893_05770	COG5002	protein histidine kinase activity
BA893_05785	COG0582	viral genome integration into host DNA
BA893_05795	COG0582	viral genome integration into host DNA
BA893_05825	COG1479	Protein of unknown function DUF262
BA893_05830	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
BA893_05960	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
BA893_05965	COG1396	sequence-specific DNA binding
BA893_05970	COG3135	benzoate transporter
BA893_05975	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BA893_05980	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BA893_06015	COG0686	Belongs to the AlaDH PNT family
BA893_06025	COG1674	ftsk spoiiie
BA893_06030	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
BA893_06035	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
BA893_06045	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BA893_06050	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
BA893_06055	COG0156	8-amino-7-oxononanoate synthase activity
BA893_06065	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
BA893_06070	COG0501	Belongs to the peptidase M48B family
BA893_06080	COG4221	oxidoreductase activity
BA893_06095	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
BA893_06115	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
BA893_06125	COG0482	sulfurtransferase activity
BA893_06135	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BA893_06145	COG1757	Na H antiporter
BA893_06160	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
BA893_06165	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
BA893_06170	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
BA893_06175	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
BA893_06175	COG0131	Imidazoleglycerol-phosphate dehydratase
BA893_06180	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
BA893_06185	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
BA893_06190	COG0107	imidazoleglycerol-phosphate synthase activity
BA893_06195	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
BA893_06195	COG0140	phosphoribosyl-ATP diphosphatase activity
BA893_06200	COG3012	SEC-C Motif Domain Protein
BA893_06205	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
BA893_06210	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
BA893_06215	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
BA893_06220	COG0215	cysteine-tRNA ligase activity
BA893_06225	COG1435	thymidine kinase activity
BA893_06230	COG1434	Gram-negative-bacterium-type cell wall biogenesis
BA893_06245	COG2116	formate transmembrane transporter activity
BA893_06250	COG0390	transport system, permease component
BA893_06255	COG4459	periplasmic nitrate reductase
BA893_06260	COG3005	denitrification pathway
BA893_06265	COG0243	molybdopterin cofactor binding
BA893_06280	COG1227	inorganic diphosphatase activity
BA893_06290	COG4172	Belongs to the ABC transporter superfamily
BA893_06300	COG4171	peptide transport system, permease
BA893_06305	COG4168	peptide transport system, permease
BA893_06315	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
BA893_06320	COG1842	Phage shock protein A
BA893_06330	COG1983	PspC domain protein
BA893_06350	COG2818	Glycosylase
BA893_06355	COG0626	cystathionine gamma-synthase activity
BA893_06365	COG0733	neurotransmitter:sodium symporter activity
BA893_06370	COG0564	pseudouridine synthase activity
BA893_06380	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BA893_06385	COG1151	hydroxylamine reductase activity
BA893_06390	COG3604	Transcriptional regulator
BA893_06400	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
BA893_06405	COG4136	ATPase activity
BA893_06410	COG4135	transport system, permease component
BA893_06415	COG4134	Bacterial extracellular solute-binding protein
BA893_06425	COG3313	Fe-S protein
BA893_06440	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
BA893_06445	COG0642	Histidine kinase
BA893_06450	COG0745	RESPONSE REGULATOR receiver
BA893_06460	COG1061	Type III restriction enzyme res subunit
BA893_06465	COG1187	pseudouridine synthase activity
BA893_06470	COG2814	Major facilitator Superfamily
BA893_06500	COG3005	denitrification pathway
BA893_06505	COG0702	epimerase
BA893_06510	COG0534	Mate efflux family protein
BA893_06515	COG1136	(ABC) transporter
BA893_06530	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
BA893_06540	COG1960	acyl-CoA dehydrogenase activity
BA893_06545	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
BA893_06550	COG3273	potassium ion transport
BA893_06550	COG2985	domain, Protein
BA893_06555	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
BA893_06565	COG1737	Transcriptional regulator
BA893_06570	COG0076	glutamate decarboxylase activity
BA893_06580	COG2431	L-lysine efflux transmembrane transporter activity
BA893_06590	COG3070	regulator of competence-specific genes
BA893_06605	COG4191	Histidine kinase
BA893_06605	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BA893_06615	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
BA893_06625	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
BA893_06630	COG4988	ABC transporter
BA893_06635	COG0492	ferredoxin-NADP+ reductase activity
BA893_06655	COG0471	metal ion transport
BA893_06660	COG2949	membrane
BA893_06665	COG0281	malic enzyme
BA893_06670	COG1643	Atp-dependent helicase
BA893_06685	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
BA893_06720	COG0247	lactate metabolic process
BA893_06720	COG0277	FAD linked oxidase domain protein
BA893_06725	COG2020	methyltransferase activity
BA893_06730	COG0583	DNA-binding transcription factor activity
BA893_06735	COG3384	dioxygenase
BA893_06740	COG0435	Glutathione S-transferase
BA893_06750	COG0010	Belongs to the arginase family
BA893_06755	COG1228	amidohydrolase
BA893_06775	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
BA893_06785	COG0291	Belongs to the bacterial ribosomal protein bL35 family
BA893_06800	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
BA893_06805	COG0072	phenylalanine-tRNA ligase activity
BA893_06805	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BA893_06810	COG1621	beta-fructofuranosidase activity
BA893_06815	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BA893_06835	COG0776	regulation of translation
BA893_06845	COG0500	methyltransferase
BA893_06850	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
BA893_06855	COG0295	cytidine deaminase activity
BA893_06860	COG1346	cytolysis
BA893_06865	COG1380	Effector of murein hydrolase LrgA
BA893_06870	COG2925	Exonuclease
BA893_06935	COG1484	DNA-dependent DNA replication
BA893_07125	COG2226	methyltransferase
BA893_07130	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
BA893_07150	COG0702	epimerase
BA893_07155	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
BA893_07165	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
BA893_07185	COG2988	succinylglutamate desuccinylase activity
BA893_07190	COG4139	cobalamin transport
BA893_07215	COG0583	DNA-binding transcription factor activity
BA893_07225	COG1451	nucleotide metabolic process
BA893_07230	COG3129	Specifically methylates the adenine in position 1618 of 23S rRNA
BA893_07285	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
BA893_07290	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BA893_07305	COG2195	Cleaves the N-terminal amino acid of tripeptides
BA893_07315	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
BA893_07325	COG0625	glutathione transferase activity
BA893_07350	COG4145	pantothenate transmembrane transporter activity
BA893_07355	COG3924	membrane
BA893_07375	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
BA893_07385	COG1349	DNA-binding transcription factor activity
BA893_07390	COG0561	phosphatase activity
BA893_07405	COG0579	oxidoreductase
BA893_07435	COG4638	Rieske (2fe-2S)
BA893_07440	COG0583	DNA-binding transcription factor activity
BA893_07560	COG1953	Uracil, thiamine, allantoin
BA893_07575	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
BA893_07590	COG2059	Chromate
BA893_07595	COG2059	Chromate
BA893_07625	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BA893_07635	COG1414	Transcriptional regulator
BA893_07640	COG0400	carboxylic ester hydrolase activity
BA893_07650	COG0784	Response regulator, receiver
BA893_07650	COG5002	protein histidine kinase activity
BA893_07650	COG2198	Histidine kinase
BA893_07660	COG0559	Belongs to the binding-protein-dependent transport system permease family
BA893_07680	COG0829	nickel cation binding
BA893_07685	COG0831	urea catabolic process
BA893_07690	COG0832	Belongs to the urease beta subunit family
BA893_07695	COG0804	urea catabolic process
BA893_07705	COG0830	nickel cation binding
BA893_07710	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
BA893_07725	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BA893_07725	COG4191	Histidine kinase
BA893_07745	COG0814	amino acid
BA893_07765	COG1132	(ABC) transporter
BA893_07770	COG1132	(ABC) transporter
BA893_07785	COG0443	Heat shock 70 kDa protein
BA893_07790	COG0443	Heat shock 70 kDa protein
BA893_07825	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
BA893_07830	COG1643	Atp-dependent helicase
BA893_07845	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BA893_07855	COG1793	dna ligase
BA893_07865	COG0534	Mate efflux family protein
BA893_07870	COG0307	riboflavin synthase, alpha
BA893_07890	COG3706	GGDEF domain
BA893_07900	COG0791	NLP P60 protein
BA893_07905	COG0840	transmembrane signaling receptor activity
BA893_07925	COG1940	carbohydrate kinase activity
BA893_07940	COG0303	'Molybdopterin
BA893_07950	COG3842	ATPase activity
BA893_07965	COG2204	response regulator
BA893_07970	COG4191	Histidine kinase
BA893_07975	COG0488	(ABC) transporter
BA893_07980	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
BA893_08010	COG0243	molybdopterin cofactor binding
BA893_08010	COG3383	formate dehydrogenase (NAD+) activity
BA893_08015	COG0437	4 iron, 4 sulfur cluster binding
BA893_08030	COG0110	maltose O-acetyltransferase activity
BA893_08035	COG2207	Transcriptional regulator
BA893_08040	COG0534	Mate efflux family protein
BA893_08045	COG0004	ammonium transporteR
BA893_08050	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
BA893_08055	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
BA893_08060	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
BA893_08065	COG1177	transmembrane transport
BA893_08070	COG1176	ABC-type spermidine putrescine transport system, permease component I
BA893_08075	COG3842	ATPase activity
BA893_08090	COG0037	tRNA processing
BA893_08095	COG0589	response to stress
BA893_08100	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BA893_08115	COG2217	Heavy metal translocating P-type atpase
BA893_08125	COG2010	Cytochrome c
BA893_08140	COG3278	Belongs to the heme-copper respiratory oxidase family
BA893_08160	COG2801	Transposase and inactivated derivatives
BA893_08170	COG0544	peptidyl-prolyl cis-trans isomerase activity
BA893_08205	COG3120	sequence-specific DNA binding
BA893_08210	COG1067	ATP-dependent peptidase activity
BA893_08215	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
BA893_08240	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
BA893_08240	COG0116	Belongs to the methyltransferase superfamily
BA893_08250	COG0167	dihydroorotate dehydrogenase activity
BA893_08255	COG2902	Dehydrogenase
BA893_08260	COG0308	aminopeptidase N
BA893_08275	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
BA893_08280	COG1956	GAF domain-containing protein
BA893_08285	COG1132	(ABC) transporter
BA893_08290	COG2995	paraquat-inducible protein a
BA893_08295	COG3008	intermembrane lipid transfer
BA893_08300	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
BA893_08300	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
BA893_08320	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
BA893_08325	COG1666	GTP binding
BA893_08340	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BA893_08345	COG4597	amino acid ABC transporter
BA893_08350	COG0765	amino acid transport
BA893_08355	COG1126	abc transporter atp-binding protein
BA893_08360	COG0670	Belongs to the BI1 family
BA893_08370	COG2920	part of a sulfur-relay system
BA893_08375	COG1254	Belongs to the acylphosphatase family
BA893_08380	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
BA893_08395	COG2885	chlorophyll binding
BA893_08405	COG3706	GGDEF domain
BA893_08415	COG0602	queuosine metabolic process
BA893_08420	COG0561	phosphatase activity
BA893_08430	COG0110	maltose O-acetyltransferase activity
BA893_08470	COG1051	belongs to the nudix hydrolase family
BA893_08485	COG2828	Protein conserved in bacteria
BA893_08495	COG0372	Belongs to the citrate synthase family
BA893_08500	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
BA893_08530	COG0730	response to heat
BA893_08540	COG1012	belongs to the aldehyde dehydrogenase family
BA893_08545	COG3284	Transcriptional regulator
BA893_08555	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
BA893_08560	COG0363	glucosamine-6-phosphate deaminase activity
BA893_08565	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
BA893_08575	COG4774	siderophore transport
BA893_08580	COG4565	transcriptional regulatory protein
BA893_08585	COG3290	protein histidine kinase activity
BA893_08600	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BA893_08615	COG0527	aspartate kinase activity
BA893_08625	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
BA893_08630	COG0456	acetyltransferase
BA893_08640	COG4176	ABC-type proline glycine betaine transport system permease component
BA893_08645	COG2113	Glycine betaine
BA893_08665	COG4221	oxidoreductase activity
BA893_08675	COG0745	RESPONSE REGULATOR receiver
BA893_08680	COG0642	Histidine kinase
BA893_08685	COG1368	sulfuric ester hydrolase activity
BA893_08700	COG1404	Belongs to the peptidase S8 family
BA893_08720	COG1115	amino acid carrier protein
BA893_08735	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BA893_08740	COG1280	lysine exporter protein (LysE YggA)
BA893_08745	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
BA893_08750	COG3550	peptidyl-serine autophosphorylation
BA893_08765	COG2963	transposase activity
BA893_08775	COG2963	transposase activity
BA893_08800	COG3344	reverse transcriptase
BA893_08805	COG2801	Transposase and inactivated derivatives
BA893_08830	COG5001	Diguanylate cyclase
BA893_08830	COG3300	MHYT domain
BA893_08895	COG3706	GGDEF domain
BA893_08960	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BA893_08970	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BA893_08975	COG1742	UPF0060 membrane protein
BA893_08980	COG0668	transmembrane transport
BA893_09035	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
BA893_09040	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
BA893_09045	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
BA893_09050	COG1289	transmembrane transporter activity
BA893_09065	COG1560	Kdo2-lipid A biosynthetic process
BA893_09075	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
BA893_09080	COG3063	Type IV pilus biogenesis stability protein PilW
BA893_09110	COG2315	Protein conserved in bacteria
BA893_09115	COG1846	Transcriptional regulator
BA893_09120	COG0697	spore germination
BA893_09125	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
BA893_09130	COG1012	belongs to the aldehyde dehydrogenase family
BA893_09135	COG2957	Belongs to the agmatine deiminase family
BA893_09145	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BA893_09150	COG1012	belongs to the aldehyde dehydrogenase family
BA893_09155	COG1396	sequence-specific DNA binding
BA893_09155	COG1917	Cupin 2, conserved barrel domain protein
BA893_09160	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
BA893_09165	COG0174	glutamine synthetase
BA893_09170	COG1757	Na H antiporter
BA893_09200	COG1126	abc transporter atp-binding protein
BA893_09205	COG0765	amino acid transport
BA893_09210	COG4597	amino acid ABC transporter
BA893_09215	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BA893_09220	COG0583	DNA-binding transcription factor activity
BA893_09230	COG2824	Alkylphosphonate utilization operon protein PhnA
BA893_09235	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
BA893_09270	COG0346	lactoylglutathione lyase activity
BA893_09295	COG1794	racemase activity, acting on amino acids and derivatives
BA893_09300	COG4977	sequence-specific DNA binding
BA893_09315	COG0724	RNA recognition motif
BA893_09340	COG0745	RESPONSE REGULATOR receiver
BA893_09345	COG5000	phosphorelay sensor kinase activity
BA893_09345	COG5002	protein histidine kinase activity
BA893_09370	COG1454	alcohol dehydrogenase
BA893_09375	COG2610	gluconate transmembrane transporter activity
BA893_09385	COG3718	enzyme involved in inositol metabolism
BA893_09390	COG0673	inositol 2-dehydrogenase activity
BA893_09395	COG2814	Major facilitator Superfamily
BA893_09395	COG0477	Major facilitator Superfamily
BA893_09400	COG1082	Xylose isomerase domain protein TIM barrel
BA893_09410	COG1082	Xylose isomerase domain protein TIM barrel
BA893_09420	COG1012	belongs to the aldehyde dehydrogenase family
BA893_09420	COG1454	alcohol dehydrogenase
BA893_09425	COG3962	Belongs to the TPP enzyme family
BA893_09430	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BA893_09445	COG2999	glutathione oxidoreductase activity
BA893_09470	COG2814	Major facilitator Superfamily
BA893_09470	COG0477	Major facilitator Superfamily
BA893_09475	COG0673	inositol 2-dehydrogenase activity
BA893_09480	COG1082	Xylose isomerase domain protein TIM barrel
BA893_09500	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
BA893_09500	COG2885	chlorophyll binding
BA893_09540	COG0438	transferase activity, transferring glycosyl groups
BA893_09565	COG3206	protein involved in exopolysaccharide biosynthesis
BA893_09565	COG0489	protein tyrosine kinase activity
BA893_09570	COG0438	transferase activity, transferring glycosyl groups
BA893_09580	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
BA893_09595	COG5492	domain, Protein
BA893_09640	COG0456	acetyltransferase
BA893_09645	COG2226	methyltransferase
BA893_09715	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BA893_09725	COG3768	UPF0283 membrane protein
BA893_09730	COG3106	COG3106 Predicted ATPase
BA893_09755	COG0814	amino acid
BA893_09760	COG1760	l-serine dehydratase
BA893_09765	COG0720	synthase
BA893_09770	COG0017	Asparaginyl-tRNA synthetase
BA893_09780	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BA893_09795	COG1448	Aminotransferase
BA893_09810	COG2176	DNA-directed DNA polymerase activity
BA893_09820	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BA893_09825	COG1846	Transcriptional regulator
BA893_09850	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
BA893_09865	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BA893_09870	COG3108	Peptidase M15
BA893_09875	COG2989	Protein conserved in bacteria
BA893_09900	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
BA893_09910	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
BA893_09915	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BA893_09920	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BA893_09930	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BA893_09960	COG0019	diaminopimelate decarboxylase activity
BA893_10000	COG0322	excinuclease ABC activity
BA893_10005	COG2197	response regulator
BA893_10010	COG0417	DNA replication proofreading
BA893_10020	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
BA893_10025	COG3099	Belongs to the UPF0263 family
BA893_10030	COG1187	pseudouridine synthase activity
BA893_10040	COG0009	L-threonylcarbamoyladenylate synthase
BA893_10045	COG0613	PHP domain protein
BA893_10055	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
BA893_10060	COG0512	Glutamine amidotransferase of anthranilate synthase
BA893_10065	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
BA893_10070	COG0135	phosphoribosylanthranilate isomerase activity
BA893_10070	COG0134	indole-3-glycerol-phosphate synthase activity
BA893_10075	COG0133	tryptophan synthase activity
BA893_10080	COG0159	tryptophan synthase activity
BA893_10085	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BA893_10090	COG0318	PFAM AMP-dependent synthetase and ligase
BA893_10095	COG1301	dicarboxylic acid transport
BA893_10120	COG1607	acyl-coa hydrolase
BA893_10125	COG2350	Protein conserved in bacteria
BA893_10135	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
BA893_10140	COG0583	DNA-binding transcription factor activity
BA893_10155	COG5001	Diguanylate cyclase
BA893_10160	COG1032	radical SAM domain protein
BA893_10165	COG0745	RESPONSE REGULATOR receiver
BA893_10170	COG3850	Histidine kinase
BA893_10170	COG5002	protein histidine kinase activity
BA893_10205	COG3118	belongs to the thioredoxin family
BA893_10210	COG4232	protein-disulfide reductase activity
BA893_10220	COG0189	ligase activity
BA893_10225	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BA893_10230	COG3706	GGDEF domain
BA893_10230	COG0745	RESPONSE REGULATOR receiver
BA893_10235	COG2308	Evidence 4 Homologs of previously reported genes of
BA893_10250	COG2307	Protein conserved in bacteria
BA893_10250	COG2308	Evidence 4 Homologs of previously reported genes of
BA893_10285	COG2863	cytochrome
BA893_10290	COG3258	Cytochrome c
BA893_10295	COG2995	paraquat-inducible protein a
BA893_10300	COG3008	intermembrane lipid transfer
BA893_10300	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
BA893_10305	COG3009	Protein conserved in bacteria
BA893_10310	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
BA893_10335	COG4166	transmembrane transport
BA893_10345	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
BA893_10350	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
BA893_10360	COG0539	negative regulation of cytoplasmic translation
BA893_10365	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
BA893_10370	COG0616	signal peptide processing
BA893_10375	COG1028	Short-chain dehydrogenase reductase Sdr
BA893_10390	COG0587	DNA-directed DNA polymerase activity
BA893_10395	COG1940	carbohydrate kinase activity
BA893_10400	COG0469	pyruvate kinase activity
BA893_10405	COG4667	esterase of the alpha-beta hydrolase superfamily
BA893_10420	COG0733	neurotransmitter:sodium symporter activity
BA893_10430	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BA893_10430	COG1263	PTS System
BA893_10440	COG1263	PTS System
BA893_10440	COG2190	(PTS) system
BA893_10440	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BA893_10445	COG0084	hydrolase, TatD family'
BA893_10450	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
BA893_10455	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
BA893_10460	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
BA893_10490	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BA893_10495	COG0416	fatty acid biosynthetic process
BA893_10505	COG1399	metal-binding, possibly nucleic acid-binding protein
BA893_10510	COG0424	maF-like protein
BA893_10515	COG0564	pseudouridine synthase activity
BA893_10520	COG1530	ribonuclease E activity
BA893_10525	COG0659	secondary active sulfate transmembrane transporter activity
BA893_10530	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BA893_10535	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
BA893_10545	COG0572	uridine kinase
BA893_10550	COG0489	protein tyrosine kinase activity
BA893_10555	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BA893_10555	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BA893_10565	COG2186	Transcriptional regulator
BA893_10570	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
BA893_10575	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
BA893_10580	COG0653	protein targeting
BA893_10585	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BA893_10590	COG2199	diguanylate cyclase activity
BA893_10590	COG2203	Gaf domain
BA893_10595	COG0366	Alpha amylase catalytic
BA893_10600	COG1122	ATPase activity
BA893_10605	COG4120	Belongs to the binding-protein-dependent transport system permease family
BA893_10615	COG3092	negative regulation of chromosome organization
BA893_10620	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BA893_10625	COG0857	belongs to the CobB CobQ family
BA893_10625	COG0280	phosphate acetyltransferase
BA893_10630	COG3174	membrane
BA893_10635	COG0435	Glutathione S-transferase
BA893_10645	COG0444	Belongs to the ABC transporter superfamily
BA893_10650	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BA893_10655	COG0601	transmembrane transport
BA893_10665	COG0314	molybdopterin synthase activity
BA893_10670	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
BA893_10675	COG0315	cyclic pyranopterin monophosphate synthase activity
BA893_10680	COG0521	Mo-molybdopterin cofactor biosynthetic process
BA893_10685	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
BA893_10690	COG0391	Required for morphogenesis under gluconeogenic growth conditions
BA893_10695	COG2198	Histidine kinase
BA893_10700	COG2204	response regulator
BA893_10705	COG0556	nucleotide-excision repair
BA893_10715	COG4657	Part of a membrane complex involved in electron transport
BA893_10720	COG2878	Part of a membrane complex involved in electron transport
BA893_10725	COG4656	Part of a membrane complex involved in electron transport
BA893_10730	COG4658	electron transport chain
BA893_10735	COG4659	FMN binding
BA893_10740	COG4660	Part of a membrane complex involved in electron transport
BA893_10745	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
BA893_10750	COG0346	lactoylglutathione lyase activity
BA893_10760	COG2885	chlorophyll binding
BA893_10765	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BA893_10770	COG2056	Na+-H+ antiporter family
BA893_10850	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
BA893_10900	COG4695	Portal protein
BA893_10970	COG4974	Belongs to the 'phage' integrase family
BA893_10975	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
BA893_10990	COG1028	Short-chain dehydrogenase reductase Sdr
BA893_10995	COG1454	alcohol dehydrogenase
BA893_10995	COG1012	belongs to the aldehyde dehydrogenase family
BA893_11000	COG2095	MarC family integral membrane protein
BA893_11005	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BA893_11010	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BA893_11015	COG1757	Na H antiporter
BA893_11030	COG3081	Nucleoid-associated protein
BA893_11035	COG3082	Protein of unknown function (DUF1414)
BA893_11050	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
BA893_11060	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BA893_11065	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BA893_11070	COG1120	ATPase activity
BA893_11075	COG1522	sequence-specific DNA binding
BA893_11080	COG0626	cystathionine gamma-synthase activity
BA893_11085	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BA893_11090	COG0765	amino acid transport
BA893_11100	COG0123	including yeast histone deacetylase and acetoin utilization protein
BA893_11110	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BA893_11115	COG0778	Nitroreductase
BA893_11120	COG0446	pyridine nucleotide-disulphide oxidoreductase
BA893_11120	COG1902	pentaerythritol trinitrate reductase activity
BA893_11125	COG0616	signal peptide processing
BA893_11130	COG0252	asparaginase activity
BA893_11135	COG3139	Protein of unknown function (DUF1315)
BA893_11145	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BA893_11150	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
BA893_11160	COG2226	methyltransferase
BA893_11175	COG1785	Belongs to the alkaline phosphatase family
BA893_11180	COG0668	transmembrane transport
BA893_11190	COG2261	transglycosylase associated protein
BA893_11200	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
BA893_11205	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
BA893_11210	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
BA893_11220	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
BA893_11225	COG2832	Protein of unknown function (DUF454)
BA893_11230	COG0745	RESPONSE REGULATOR receiver
BA893_11235	COG0583	DNA-binding transcription factor activity
BA893_11240	COG5492	domain, Protein
BA893_11245	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
BA893_11250	COG1286	toxin biosynthetic process
BA893_11255	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
BA893_11260	COG0285	dihydrofolate synthase activity
BA893_11265	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
BA893_11270	COG0101	tRNA pseudouridine synthase activity
BA893_11280	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BA893_11285	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BA893_11290	COG0747	negative chemotaxis
BA893_11295	COG1349	DNA-binding transcription factor activity
BA893_11305	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BA893_11315	COG0431	NADPH-dependent FMN reductase
BA893_11325	COG3101	peptidyl-lysine hydroxylation
BA893_11330	COG2860	membrane
BA893_11335	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
BA893_11340	COG2890	protein-(glutamine-N5) methyltransferase activity
BA893_11345	COG2840	Smr protein MutS2
BA893_11350	COG2062	phosphohistidine phosphatase, SixA
BA893_11365	COG1024	Enoyl-CoA hydratase
BA893_11365	COG1250	3-hydroxyacyl-CoA dehydrogenase
BA893_11370	COG0183	Belongs to the thiolase family
BA893_11410	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BA893_11415	COG1138	Cytochrome C-type biogenesis protein
BA893_11420	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
BA893_11425	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BA893_11430	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BA893_11435	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BA893_11440	COG4133	protoheme IX ABC transporter activity
BA893_11450	COG0835	chemotaxis
BA893_11460	COG1192	Involved in chromosome partitioning
BA893_11465	COG2201	protein-glutamate methylesterase activity
BA893_11470	COG0643	Histidine kinase
BA893_11470	COG2198	Histidine kinase
BA893_11475	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
BA893_11490	COG0455	bacterial-type flagellum organization
BA893_11515	COG1987	bacterial-type flagellum assembly
BA893_11565	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BA893_11575	COG1677	Flagellar hook-basal body complex protein FliE
BA893_11580	COG2204	response regulator
BA893_11585	COG4191	Histidine kinase
BA893_11600	COG1516	flagellar protein fliS
BA893_11610	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
BA893_11615	COG1334	flagellar protein FlaG
BA893_11620	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BA893_11625	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BA893_11630	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BA893_11635	COG2837	iron assimilation
BA893_11660	COG1393	Belongs to the ArsC family
BA893_11665	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BA893_11680	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
BA893_11685	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BA893_11690	COG2716	regulation of RNA biosynthetic process
BA893_11695	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
BA893_11710	COG4783	chaperone-mediated protein folding
BA893_11715	COG1393	Belongs to the ArsC family
BA893_11735	COG2233	PERMEase
BA893_11740	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
BA893_11745	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
BA893_11750	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
BA893_11755	COG0121	glutamine amidotransferase
BA893_11760	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
BA893_11765	COG1960	acyl-CoA dehydrogenase activity
BA893_11780	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BA893_11785	COG0328	RNA-DNA hybrid ribonuclease activity
BA893_11790	COG2226	methyltransferase
BA893_11795	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BA893_11800	COG1388	LysM domain
BA893_11800	COG0741	lytic transglycosylase activity
BA893_11810	COG3021	interspecies interaction between organisms
BA893_11815	COG0347	Belongs to the P(II) protein family
BA893_11825	COG0037	tRNA processing
BA893_11830	COG0825	malonyl-CoA metabolic process
BA893_11835	COG0587	DNA-directed DNA polymerase activity
BA893_11845	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
BA893_11850	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
BA893_11860	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
BA893_11865	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
BA893_11875	COG0750	zinc metalloprotease
BA893_11880	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
BA893_11885	COG0575	Belongs to the CDS family
BA893_11890	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
BA893_11895	COG0233	cytoplasmic translational termination
BA893_11900	COG0528	UMP kinase activity
BA893_11905	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
BA893_11910	COG0052	Belongs to the universal ribosomal protein uS2 family
BA893_11915	COG0024	Methionine aminopeptidase
BA893_11920	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
BA893_11930	COG0564	pseudouridine synthase activity
BA893_11960	COG1671	Belongs to the UPF0178 family
BA893_11965	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
BA893_11975	COG0254	rRNA binding
BA893_11980	COG1720	tRNA m6t6A37 methyltransferase activity
BA893_12000	COG0733	neurotransmitter:sodium symporter activity
BA893_12010	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BA893_12015	COG0514	ATP-dependent DNA helicase (RecQ)
BA893_12020	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BA893_12045	COG0813	purine-nucleoside phosphorylase activity
BA893_12085	COG5002	protein histidine kinase activity
BA893_12105	COG2217	Heavy metal translocating P-type atpase
BA893_12190	COG3344	reverse transcriptase
BA893_12220	COG2991	Protein conserved in bacteria
BA893_12225	COG1477	protein flavinylation
BA893_12230	COG2871	sodium ion transport
BA893_12235	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
BA893_12240	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
BA893_12250	COG1805	sodium ion transport
BA893_12255	COG1726	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
BA893_12260	COG0271	Belongs to the BolA IbaG family
BA893_12265	COG2813	Specifically methylates the guanine in position
BA893_12290	COG1595	DNA-templated transcription, initiation
BA893_12310	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
BA893_12315	COG0693	protein deglycase activity
BA893_12320	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
BA893_12325	COG3706	GGDEF domain
BA893_12330	COG2166	iron-sulfur cluster assembly
BA893_12335	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
BA893_12340	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
BA893_12350	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
BA893_12350	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
BA893_12355	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
BA893_12360	COG1074	ATP-dependent DNA helicase activity
BA893_12365	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
BA893_12385	COG3141	response to X-ray
BA893_12395	COG2171	N-acyltransferase activity
BA893_12400	COG0584	glycerophosphoryl diester phosphodiesterase
BA893_12405	COG2271	Major facilitator Superfamily
BA893_12410	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
BA893_12415	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
BA893_12420	COG1349	DNA-binding transcription factor activity
BA893_12425	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
BA893_12450	COG1609	Transcriptional regulator
BA893_12455	COG1609	Transcriptional regulator
BA893_12460	COG0583	DNA-binding transcription factor activity
BA893_12535	COG4964	Belongs to the GSP D family
BA893_12565	COG2169	Transcriptional regulator
BA893_12570	COG1022	Amp-dependent synthetase and ligase
BA893_12575	COG0583	DNA-binding transcription factor activity
BA893_12580	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
BA893_12585	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
BA893_12595	COG0560	Phosphoserine phosphatase
BA893_12605	COG0813	purine-nucleoside phosphorylase activity
BA893_12610	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
BA893_12615	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
BA893_12620	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
BA893_12625	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BA893_12630	COG0084	hydrolase, TatD family'
BA893_12640	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
BA893_12655	COG3153	acetyltransferase
BA893_12680	COG0534	Mate efflux family protein
BA893_12685	COG4785	May be involved in cell division
BA893_12690	COG1185	polyribonucleotide nucleotidyltransferase activity
BA893_12695	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
BA893_12700	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
BA893_12705	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
BA893_12710	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
BA893_12715	COG0195	Participates in both transcription termination and antitermination
BA893_12720	COG0779	Required for maturation of 30S ribosomal subunits
BA893_12735	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BA893_12745	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
BA893_12750	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
BA893_12755	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
BA893_12760	COG1534	Rna-binding protein
BA893_12765	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BA893_12770	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
BA893_12775	COG2027	D-alanyl-D-alanine carboxypeptidase
BA893_12785	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
BA893_12790	COG0739	heme binding
BA893_12800	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BA893_12805	COG0316	Belongs to the HesB IscA family
BA893_12810	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
BA893_12815	COG0628	permease
BA893_12820	COG2813	Specifically methylates the guanine in position
BA893_12830	COG0747	negative chemotaxis
BA893_12840	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BA893_12845	COG0444	Belongs to the ABC transporter superfamily
BA893_12850	COG4608	Belongs to the ABC transporter superfamily
BA893_12860	COG2971	BadF BadG BcrA BcrD
BA893_12875	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BA893_12880	COG3842	ATPase activity
BA893_12890	COG1840	ABC-type Fe3 transport system, periplasmic component
BA893_12895	COG0004	ammonium transporteR
BA893_12910	COG3835	regulator
BA893_12915	COG2610	gluconate transmembrane transporter activity
BA893_12920	COG1929	Belongs to the glycerate kinase type-1 family
BA893_12925	COG1049	propionate catabolic process, 2-methylcitrate cycle
BA893_12930	COG1752	Esterase of the alpha-beta hydrolase superfamily
BA893_12940	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BA893_12945	COG1643	Atp-dependent helicase
BA893_12950	COG1489	DNA binding
BA893_12955	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
BA893_12960	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
BA893_12970	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
BA893_12975	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
BA893_12980	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
BA893_12985	COG0842	Transport permease protein
BA893_12990	COG1131	(ABC) transporter
BA893_12995	COG0659	secondary active sulfate transmembrane transporter activity
BA893_13000	COG0288	reversible hydration of carbon dioxide
BA893_13015	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BA893_13020	COG0508	dehydrogenase complex catalyzes the overall conversion of
BA893_13025	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
BA893_13030	COG2186	Transcriptional regulator
BA893_13040	COG0157	Belongs to the NadC ModD family
BA893_13050	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
BA893_13055	COG1459	type II secretion system
BA893_13065	COG0237	dephospho-CoA kinase activity
BA893_13070	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
BA893_13075	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
BA893_13090	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
BA893_13095	COG0228	four-way junction DNA binding
BA893_13100	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
BA893_13105	COG4137	Cytochrome C assembly protein
BA893_13110	COG4536	flavin adenine dinucleotide binding
BA893_13115	COG1854	S-ribosylhomocysteine lyase activity
BA893_13125	COG2918	glutathione biosynthetic process
BA893_13130	COG0612	Peptidase, M16
BA893_13135	COG1238	metal cluster binding
BA893_13145	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
BA893_13150	COG0511	ligase activity, forming carbon-carbon bonds
BA893_13150	COG5016	pyruvate
BA893_13210	COG0527	aspartate kinase activity
BA893_13215	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
BA893_13230	COG1546	Belongs to the CinA family
BA893_13240	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BA893_13250	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
BA893_13255	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
BA893_13270	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
BA893_13275	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
BA893_13280	COG0148	phosphopyruvate hydratase activity
BA893_13285	COG0504	CTP synthase activity
BA893_13295	COG3956	TIGRFAM MazG family protein
BA893_13300	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BA893_13305	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BA893_13320	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
BA893_13325	COG1381	Involved in DNA repair and RecF pathway recombination
BA893_13330	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
BA893_13340	COG0681	Belongs to the peptidase S26 family
BA893_13345	COG0481	GTPase activity
BA893_13350	COG3086	response to oxidative stress
BA893_13365	COG1595	DNA-templated transcription, initiation
BA893_13370	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
BA893_13380	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
BA893_13385	COG0354	folic acid binding
BA893_13400	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BA893_13405	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BA893_13410	COG3079	Belongs to the UPF0149 family
BA893_13415	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
BA893_13425	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
BA893_13430	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
BA893_13435	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BA893_13445	COG0583	DNA-binding transcription factor activity
BA893_13450	COG1279	arginine transmembrane transporter activity
BA893_13455	COG0668	transmembrane transport
BA893_13460	COG0191	fructose-bisphosphate aldolase activity
BA893_13465	COG0126	phosphoglycerate kinase activity
BA893_13470	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
BA893_13475	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
BA893_13485	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
BA893_13500	COG2356	endonuclease I
BA893_13505	COG1385	rRNA (uridine-N3-)-methyltransferase activity
BA893_13510	COG0189	ligase activity
BA893_13515	COG1678	Uncharacterized ACR, COG1678
BA893_13520	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
BA893_13535	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
BA893_13540	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BA893_13545	COG0762	integral membrane protein
BA893_13560	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
BA893_13565	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BA893_13570	COG2066	Belongs to the glutaminase family
BA893_13590	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
BA893_13595	COG0741	lytic transglycosylase activity
BA893_13705	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
BA893_13710	COG0300	oxidoreductase activity
BA893_13725	COG1028	Short-chain dehydrogenase reductase Sdr
BA893_13730	COG4325	translation initiation factor activity
BA893_13740	COG0795	lipopolysaccharide-transporting ATPase activity
BA893_13745	COG0795	lipopolysaccharide-transporting ATPase activity
BA893_13750	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
BA893_13755	COG2927	DNA polymerase III (CHI subunit)
BA893_13760	COG0525	valine-tRNA ligase activity
BA893_13840	COG2235	arginine
BA893_13850	COG0540	Belongs to the ATCase OTCase family
BA893_13855	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
BA893_13860	COG0251	oxidation-reduction process
BA893_13865	COG0204	Acyl-transferase
BA893_13870	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
BA893_13875	COG5007	Belongs to the BolA IbaG family
BA893_13885	COG2854	intermembrane phospholipid transfer
BA893_13890	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
BA893_13895	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
BA893_13900	COG1127	ABC transporter
BA893_13910	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
BA893_13910	COG0517	IMP dehydrogenase activity
BA893_13920	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
BA893_13925	COG1137	ATPase activity
BA893_13935	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
BA893_13940	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BA893_13945	COG1660	Displays ATPase and GTPase activities
BA893_13950	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BA893_13955	COG2239	Acts as a magnesium transporter
BA893_13960	COG0312	modulator of DNA gyrase
BA893_13965	COG3028	Belongs to the UPF0307 family
BA893_13970	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BA893_13975	COG0564	pseudouridine synthase activity
BA893_13985	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
BA893_13990	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
BA893_13995	COG0312	modulator of DNA gyrase
BA893_14000	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BA893_14005	COG3164	Protein of unknown function
BA893_14010	COG1530	ribonuclease E activity
BA893_14015	COG0424	maF-like protein
BA893_14020	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
BA893_14025	COG1792	Involved in formation and maintenance of cell shape
BA893_14030	COG1077	Cell shape determining protein MreB Mrl
BA893_14080	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
BA893_14090	COG3409	Peptidoglycan-binding domain 1 protein
BA893_14090	COG3267	Type II secretory pathway component ExeA
BA893_14115	COG2199	diguanylate cyclase activity
BA893_14115	COG2200	EAL domain
BA893_14120	COG0629	single-stranded DNA binding
BA893_14135	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
BA893_14145	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
BA893_14150	COG0527	aspartate kinase activity
BA893_14155	COG1410	methionine synthase
BA893_14155	COG0646	methionine synthase
BA893_14170	COG3335	DDE superfamily endonuclease
BA893_14220	COG0175	sulfate reduction
BA893_14225	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BA893_14230	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
BA893_14250	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BA893_14255	COG0735	belongs to the Fur family
BA893_14265	COG0166	Belongs to the GPI family
BA893_14270	COG0432	Pfam Uncharacterised protein family UPF0047
BA893_14275	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BA893_14280	COG0305	Participates in initiation and elongation during chromosome replication
BA893_14310	COG2965	DNA replication, synthesis of RNA primer
BA893_14315	COG0360	Binds together with S18 to 16S ribosomal RNA
BA893_14320	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
BA893_14325	COG0338	D12 class N6 adenine-specific DNA methyltransferase
BA893_14335	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
BA893_14340	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
BA893_14370	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
BA893_14380	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
BA893_14380	COG0678	peroxiredoxin activity
BA893_14385	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
BA893_14385	COG0165	Argininosuccinate lyase
BA893_14390	COG0137	argininosuccinate synthase activity
BA893_14395	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
BA893_14400	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
BA893_14410	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
BA893_14420	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
BA893_14425	COG0460	homoserine dehydrogenase
BA893_14425	COG0527	aspartate kinase activity
BA893_14430	COG0626	cystathionine gamma-synthase activity
BA893_14440	COG0281	malic enzyme
BA893_14455	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
BA893_14475	COG2923	Belongs to the DsrF TusC family
BA893_14480	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
BA893_14485	COG2964	Protein conserved in bacteria
BA893_14490	COG0545	Peptidyl-prolyl cis-trans isomerase
BA893_14500	COG2900	Belongs to the SlyX family
BA893_14510	COG1047	Peptidyl-prolyl cis-trans
BA893_14525	COG2249	NAD(P)H dehydrogenase (quinone) activity
BA893_14530	COG0488	(ABC) transporter
BA893_14540	COG0429	hydrolase of the alpha beta-hydrolase fold
BA893_14545	COG3089	Belongs to the UPF0270 family
BA893_14550	COG3954	Phosphoribulokinase
BA893_14555	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BA893_14565	COG1012	belongs to the aldehyde dehydrogenase family
BA893_14575	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
BA893_14580	COG0512	Glutamine amidotransferase of anthranilate synthase
BA893_14585	COG0180	Tryptophanyl-tRNA synthetase
BA893_14590	COG0546	phosphoglycolate phosphatase activity
BA893_14595	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BA893_14600	COG0557	exoribonuclease II activity
BA893_14605	COG1959	2 iron, 2 sulfur cluster binding
BA893_14610	COG1017	nitric oxide dioxygenase activity
BA893_14610	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BA893_14615	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
BA893_14620	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
BA893_14625	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
BA893_14630	COG0330	HflC and HflK could
BA893_14635	COG0330	HflC and HflK could
BA893_14640	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
BA893_14650	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
BA893_14655	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
BA893_14660	COG0860	N-Acetylmuramoyl-L-alanine amidase
BA893_14665	COG0802	atpase or kinase
BA893_14670	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
BA893_14735	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
BA893_14740	COG1162	GTPase activity
BA893_14750	COG0471	metal ion transport
BA893_14760	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
BA893_14765	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BA893_14775	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
BA893_14780	COG1045	serine acetyltransferase
BA893_14785	COG4942	peptidase
BA893_14805	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
BA893_14810	COG1053	succinate dehydrogenase
BA893_14815	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
BA893_14835	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
BA893_14840	COG1509	lysine 2,3-aminomutase activity
BA893_14845	COG1285	pathogenesis
BA893_14860	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
BA893_14865	COG0534	Mate efflux family protein
BA893_14870	COG0205	6-phosphofructokinase activity
BA893_14880	COG3678	ATP-independent chaperone mediated protein folding
BA893_14885	COG0745	RESPONSE REGULATOR receiver
BA893_14890	COG2205	protein histidine kinase activity
BA893_14895	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
BA893_14900	COG3030	protein affecting phage T7 exclusion by the F plasmid
BA893_14905	COG1027	Aspartate ammonia-lyase
BA893_14910	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
BA893_14915	COG4232	protein-disulfide reductase activity
BA893_14925	COG3263	regulation of cellular component size
BA893_14935	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BA893_14950	COG0784	Response regulator, receiver
BA893_14950	COG2198	Histidine kinase
BA893_14950	COG2205	protein histidine kinase activity
BA893_14955	COG2814	Major facilitator Superfamily
BA893_14970	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BA893_14975	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
BA893_14980	COG0511	ligase activity, forming carbon-carbon bonds
BA893_14985	COG0439	Biotin carboxylase
BA893_14990	COG2264	protein methyltransferase activity
BA893_14995	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BA893_15000	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
BA893_15030	COG3335	DDE superfamily endonuclease
BA893_15080	COG3710	Transcriptional regulator
BA893_15095	COG0138	bifunctional purine biosynthesis protein purh
BA893_15100	COG0151	Belongs to the GarS family
BA893_15115	COG1253	flavin adenine dinucleotide binding
BA893_15120	COG3068	Protein conserved in bacteria
BA893_15130	COG1573	uracil-dna glycosylase
BA893_15135	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
BA893_15140	COG2816	NAD+ diphosphatase activity
BA893_15145	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
BA893_15150	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BA893_15155	COG0085	RNA polymerase activity
BA893_15160	COG0222	ribosome binding
BA893_15165	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
BA893_15180	COG0250	Participates in transcription elongation, termination and antitermination
BA893_15185	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BA893_15225	COG0812	UDP-N-acetylmuramate dehydrogenase activity
BA893_15235	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BA893_15320	COG4206	TonB-dependent receptor
BA893_15340	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BA893_15345	COG0534	Mate efflux family protein
BA893_15350	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
BA893_15355	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
BA893_15360	COG2937	Belongs to the GPAT DAPAT family
BA893_15365	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
BA893_15370	COG3161	chorismate lyase activity
BA893_15375	COG1580	Controls the rotational direction of flagella during chemotaxis
BA893_15380	COG0705	Rhomboid family
BA893_15395	COG2177	Part of the ABC transporter FtsEX involved in
BA893_15400	COG2884	Cell division ATP-binding protein ftsE
BA893_15405	COG0552	protein localization to endoplasmic reticulum
BA893_15410	COG0742	ribosomal rna small subunit methyltransferase
BA893_15455	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
BA893_15460	COG0640	Transcriptional regulator
BA893_15465	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
BA893_15470	COG1280	lysine exporter protein (LysE YggA)
BA893_15475	COG2267	carboxylic ester hydrolase activity
BA893_15480	COG0561	phosphatase activity
BA893_15500	COG1011	Hydrolase
BA893_15515	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
BA893_15520	COG0019	diaminopimelate decarboxylase activity
BA893_15525	COG1965	Belongs to the frataxin family
BA893_15530	COG3072	Adenylate cyclase
BA893_15535	COG0181	hydroxymethylbilane synthase activity
BA893_15540	COG1587	Uroporphyrinogen-III synthase
BA893_15545	COG2959	enzyme of heme biosynthesis
BA893_15550	COG3071	HemY protein
BA893_15595	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
BA893_15605	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
BA893_15610	COG3118	belongs to the thioredoxin family
BA893_15615	COG0513	Belongs to the DEAD box helicase family
BA893_15620	COG0248	Ppx GppA phosphatase
BA893_15625	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
BA893_15635	COG0514	ATP-dependent DNA helicase (RecQ)
BA893_15640	COG2962	Rard protein
BA893_15650	COG1280	lysine exporter protein (LysE YggA)
BA893_15655	COG0405	Gamma-glutamyltransferase
BA893_15660	COG0210	DNA helicase
BA893_15670	COG3220	belongs to the UPF0276 family
BA893_15700	COG0006	proline dipeptidase activity
BA893_15700	COG0006	proline dipeptidase activity
BA893_15710	COG2022	thiamine diphosphate biosynthetic process
BA893_15715	COG2104	thiamine diphosphate biosynthetic process
BA893_15720	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BA893_15730	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
BA893_15735	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BA893_15740	COG2132	Multicopper oxidase
BA893_15790	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
BA893_15800	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
BA893_15805	COG0408	coproporphyrinogen oxidase activity
BA893_15810	COG0009	L-threonylcarbamoyladenylate synthase
BA893_15815	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
BA893_15820	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
BA893_15825	COG0551	DNA topoisomerase type I activity
BA893_15830	COG2922	Belongs to the Smg family
BA893_15835	COG0758	DNA mediated transformation
BA893_15855	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
BA893_15855	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
BA893_15860	COG0569	domain protein
BA893_15865	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
BA893_15875	COG1272	protein, Hemolysin III
BA893_15880	COG4326	sporulation control protein
BA893_15885	COG3084	Protein conserved in bacteria
BA893_15895	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
BA893_15900	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
BA893_15905	COG0204	Acyl-transferase
BA893_15915	COG0606	chelatase, subunit chli
BA893_15925	COG3978	acetolactate synthase activity
BA893_15930	COG0129	dihydroxy-acid dehydratase activity
BA893_15940	COG0583	DNA-binding transcription factor activity
BA893_15945	COG2814	Major facilitator Superfamily
BA893_15950	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BA893_15955	COG0765	amino acid transport
BA893_15965	COG0355	proton-transporting ATP synthase activity, rotational mechanism
BA893_15970	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
BA893_15975	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
BA893_15980	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
BA893_15985	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
BA893_16000	COG0356	it plays a direct role in the translocation of protons across the membrane
BA893_16010	COG1475	DNA binding
BA893_16015	COG1192	Involved in chromosome partitioning
BA893_16025	COG0445	tRNA wobble uridine modification
BA893_16030	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
BA893_16040	COG0706	membrane insertase activity
BA893_16045	COG0594	ribonuclease P activity
BA893_16055	COG1126	abc transporter atp-binding protein
BA893_16085	COG1403	HNH endonuclease
BA893_16100	COG4626	Terminase
BA893_16100	COG1802	Transcriptional regulator
BA893_16145	COG5532	Uncharacterized conserved protein (DUF2303)
BA893_16165	COG0629	single-stranded DNA binding
BA893_16175	COG0582	viral genome integration into host DNA
BA893_16185	COG1063	alcohol dehydrogenase
BA893_16190	COG0156	8-amino-7-oxononanoate synthase activity
BA893_16195	COG5001	Diguanylate cyclase
BA893_16195	COG3300	MHYT domain
BA893_16220	COG0745	RESPONSE REGULATOR receiver
BA893_16240	COG0346	lactoylglutathione lyase activity
BA893_16250	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
BA893_16290	COG1566	PFAM secretion protein HlyD family protein
BA893_16300	COG0628	permease
BA893_16305	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
BA893_16310	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BA893_16320	COG4628	conserved protein (DUF2132)
BA893_16325	COG1686	Belongs to the peptidase S11 family
BA893_16345	COG4667	esterase of the alpha-beta hydrolase superfamily
BA893_16350	COG2095	MarC family integral membrane protein
BA893_16365	COG1301	dicarboxylic acid transport
BA893_16370	COG3339	Conserved Protein
BA893_16375	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BA893_16380	COG0700	Nucleoside recognition
BA893_16385	COG3366	ferrous iron transmembrane transporter activity
BA893_16390	COG0366	Alpha amylase catalytic
BA893_16395	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BA893_16400	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
BA893_16405	COG1640	4-alpha-glucanotransferase
BA893_16410	COG0058	SHG alpha-glucan phosphorylase activity
BA893_16415	COG2909	trisaccharide binding
BA893_16430	COG1999	signal sequence binding
BA893_16435	COG1263	PTS System
BA893_16435	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BA893_16440	COG1162	GTPase activity
BA893_16445	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
BA893_16450	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
BA893_16465	COG0366	Alpha amylase catalytic
BA893_16495	COG1263	PTS System
BA893_16495	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BA893_16505	COG2814	Major facilitator Superfamily
BA893_16510	COG4771	TonB-dependent receptor
BA893_16515	COG0583	DNA-binding transcription factor activity
BA893_16520	COG4607	ABC-type enterochelin transport system periplasmic component
BA893_16525	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BA893_16530	COG4605	iron ion homeostasis
BA893_16535	COG4604	ABC transporter, ATP-binding protein
BA893_16555	COG3033	Beta-eliminating lyase
BA893_16560	COG0814	amino acid
BA893_16575	COG3171	Protein conserved in bacteria
BA893_16590	COG2076	Multidrug Resistance protein
BA893_16595	COG0583	DNA-binding transcription factor activity
BA893_16625	COG0583	DNA-binding transcription factor activity
BA893_16630	COG0662	Cupin 2, conserved barrel domain protein
BA893_16650	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BA893_16655	COG0251	oxidation-reduction process
BA893_16665	COG2207	Transcriptional regulator
BA893_16705	COG1621	beta-fructofuranosidase activity
BA893_16715	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
BA893_16725	COG0612	Peptidase, M16
BA893_16730	COG5492	domain, Protein
BA893_16735	COG5426	von Willebrand factor, type A
BA893_16745	COG1085	galactose-1-phosphate uridylyltransferase
BA893_16750	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
BA893_16755	COG0659	secondary active sulfate transmembrane transporter activity
BA893_16765	COG1940	carbohydrate kinase activity
BA893_16780	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BA893_16790	COG0747	negative chemotaxis
BA893_16800	COG0641	radical SAM
BA893_16805	COG3119	arylsulfatase activity
BA893_16810	COG3119	arylsulfatase activity
BA893_16815	COG1653	transport
BA893_16825	COG0745	RESPONSE REGULATOR receiver
BA893_16835	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
BA893_16840	COG4772	TonB-dependent receptor
BA893_16850	COG1172	Belongs to the binding-protein-dependent transport system permease family
BA893_16855	COG1129	ABC transporter
BA893_16860	COG1879	ABC-type sugar transport system periplasmic component
BA893_16865	COG1069	ribulokinase activity
BA893_16875	COG2160	L-arabinose isomerase activity
BA893_16885	COG2017	converts alpha-aldose to the beta-anomer
BA893_16890	COG3940	Belongs to the glycosyl hydrolase 43 family
BA893_16895	COG2211	Major facilitator Superfamily
BA893_16905	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BA893_16910	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
BA893_16915	COG4521	taurine ABC transporter
BA893_16920	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BA893_16925	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BA893_16935	COG4221	oxidoreductase activity
BA893_16940	COG1136	(ABC) transporter
BA893_16960	COG1764	response to oxidative stress
BA893_16965	COG1846	Transcriptional regulator
BA893_16970	COG0450	alkyl hydroperoxide reductase
BA893_16975	COG3634	alkyl hydroperoxide reductase activity
BA893_16980	COG3119	arylsulfatase activity
BA893_17005	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BA893_17035	COG0259	pyridoxamine-phosphate oxidase activity
BA893_17090	COG1444	tRNA N-acetyltransferase activity
BA893_17115	COG4608	Belongs to the ABC transporter superfamily
BA893_17120	COG0444	Belongs to the ABC transporter superfamily
BA893_17145	COG1136	(ABC) transporter
BA893_17150	COG4591	ABC-type transport system involved in lipoprotein release permease component
BA893_17165	COG3275	phosphorelay sensor kinase activity
BA893_17170	COG3279	Response regulator of the LytR AlgR family
BA893_17175	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
BA893_17185	COG0786	glutamate:sodium symporter activity
BA893_17195	COG1131	(ABC) transporter
BA893_17210	COG0363	glucosamine-6-phosphate deaminase activity
BA893_17230	COG1741	Belongs to the pirin family
BA893_17235	COG2259	Doxx family
BA893_17245	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
BA893_17250	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BA893_17255	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BA893_17295	COG3123	guanosine phosphorylase activity
BA893_17305	COG5001	Diguanylate cyclase
BA893_17310	COG0534	Mate efflux family protein
BA893_17315	COG0564	pseudouridine synthase activity
BA893_17325	COG0583	DNA-binding transcription factor activity
BA893_17330	COG0561	phosphatase activity
BA893_17335	COG2199	diguanylate cyclase activity
BA893_17350	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
BA893_17365	COG0583	DNA-binding transcription factor activity
BA893_17375	COG1028	Short-chain dehydrogenase reductase Sdr
BA893_17390	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BA893_17395	COG0800	Aldolase
BA893_17400	COG2375	cellular response to nickel ion
BA893_17425	COG3047	cAMP biosynthetic process
BA893_17440	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
BA893_17470	COG3835	regulator
BA893_17480	COG1929	Belongs to the glycerate kinase type-1 family
BA893_17495	COG3005	denitrification pathway
BA893_17500	COG0243	molybdopterin cofactor binding
BA893_17520	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
BA893_17525	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BA893_17530	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BA893_17535	COG1116	anion transmembrane transporter activity
BA893_17540	COG0351	phosphomethylpyrimidine kinase
BA893_17545	COG0312	modulator of DNA gyrase
BA893_17550	COG0312	modulator of DNA gyrase
BA893_17555	COG1901	pseudouridine methyltransferase
BA893_17625	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BA893_17635	COG0584	glycerophosphoryl diester phosphodiesterase
BA893_17645	COG0745	RESPONSE REGULATOR receiver
BA893_17650	COG2205	protein histidine kinase activity
BA893_17665	COG0811	peptide transport
BA893_17670	COG0811	peptide transport
BA893_17675	COG0848	biopolymer transport protein
BA893_17695	COG1770	oligopeptidase
BA893_17700	COG2814	Major facilitator Superfamily
BA893_17705	COG0010	Belongs to the arginase family
BA893_17710	COG1166	arginine decarboxylase activity
BA893_17720	COG4067	protein conserved in archaea
BA893_17720	COG0189	ligase activity
BA893_17725	COG0189	ligase activity
BA893_17745	COG3706	GGDEF domain
BA893_17755	COG0579	oxidoreductase
BA893_17770	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BA893_17800	COG3706	GGDEF domain
BA893_17805	COG3046	protein related to deoxyribodipyrimidine photolyase
BA893_17815	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BA893_17815	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BA893_17820	COG1765	OsmC-like protein
BA893_17830	COG3152	Membrane
BA893_17850	COG1011	Hydrolase
BA893_17865	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BA893_17870	COG0577	efflux transmembrane transporter activity
BA893_17870	COG1136	(ABC) transporter
BA893_17875	COG1538	Outer membrane efflux protein
BA893_17880	COG3240	lipase activity
BA893_17910	COG1840	ABC-type Fe3 transport system, periplasmic component
BA893_17920	COG3842	ATPase activity
BA893_17940	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BA893_17945	COG2866	Carboxypeptidase
BA893_17960	COG1760	l-serine dehydratase
BA893_17980	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
BA893_17995	COG1304	FMN binding
BA893_18020	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BA893_18025	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
BA893_18030	COG0459	protein refolding
BA893_18035	COG1280	lysine exporter protein (LysE YggA)
BA893_18050	COG2207	Transcriptional regulator
BA893_18055	COG4303	Ethanolamine ammonia lyase large subunit
BA893_18060	COG4302	ethanolamine ammonia-lyase activity
BA893_18065	COG0531	amino acid
BA893_18080	COG1335	isochorismatase
BA893_18090	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
BA893_18105	COG0697	spore germination
BA893_18110	COG0583	DNA-binding transcription factor activity
BA893_18115	COG3015	lipoprotein NlpE involved in copper resistance
BA893_18120	COG1342	Belongs to the UPF0251 family
BA893_18140	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
BA893_18175	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BA893_18180	COG1566	PFAM secretion protein HlyD family protein
BA893_18200	COG3842	ATPase activity
BA893_18230	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BA893_18260	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
BA893_18265	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
BA893_18280	COG0574	Belongs to the PEP-utilizing enzyme family
BA893_18280	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BA893_18285	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
BA893_18295	COG0583	DNA-binding transcription factor activity
BA893_18300	COG0659	secondary active sulfate transmembrane transporter activity
BA893_18305	COG0318	PFAM AMP-dependent synthetase and ligase
BA893_18310	COG4191	Histidine kinase
BA893_18315	COG4566	intracellular signal transduction
BA893_18320	COG2814	Major facilitator Superfamily
BA893_18325	COG0583	DNA-binding transcription factor activity
BA893_18335	COG0697	spore germination
BA893_18345	COG2188	Transcriptional regulator
BA893_18360	COG0557	exoribonuclease II activity
BA893_18365	COG1278	Cold shock
BA893_18385	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BA893_18395	COG2233	PERMEase
BA893_18430	COG1309	transcriptional regulator
BA893_18440	COG2205	protein histidine kinase activity
BA893_18445	COG0745	RESPONSE REGULATOR receiver
BA893_18480	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
BA893_18485	COG3122	Protein conserved in bacteria
BA893_18490	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BA893_18495	COG1012	belongs to the aldehyde dehydrogenase family
BA893_18500	COG1522	sequence-specific DNA binding
BA893_18505	COG3608	succinylglutamate desuccinylase aspartoacylase
BA893_18510	COG0006	proline dipeptidase activity
BA893_18515	COG1609	Transcriptional regulator
BA893_18520	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BA893_18525	COG2723	6-phospho-beta-galactosidase activity
BA893_18530	COG1263	PTS System
BA893_18530	COG2190	(PTS) system
BA893_18530	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BA893_18535	COG2723	6-phospho-beta-galactosidase activity
BA893_18545	COG1028	Short-chain dehydrogenase reductase Sdr
BA893_18560	COG0583	DNA-binding transcription factor activity
BA893_18570	COG0513	Belongs to the DEAD box helicase family
BA893_18605	COG1028	Short-chain dehydrogenase reductase Sdr
BA893_18610	COG0625	glutathione transferase activity
BA893_18625	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
BA893_18640	COG1278	Cold shock
BA893_18645	COG1741	Belongs to the pirin family
BA893_18650	COG4667	esterase of the alpha-beta hydrolase superfamily
BA893_18660	COG1846	Transcriptional regulator
BA893_18665	COG3304	Inner membrane component domain
BA893_18670	COG0673	inositol 2-dehydrogenase activity
BA893_18675	COG2194	sulfuric ester hydrolase activity
BA893_18680	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
BA893_18695	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
BA893_18710	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
BA893_18730	COG1418	mRNA catabolic process
BA893_18735	COG2239	Acts as a magnesium transporter
BA893_18740	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
BA893_18755	COG0531	amino acid
BA893_18760	COG1522	sequence-specific DNA binding
BA893_18785	COG0673	inositol 2-dehydrogenase activity
BA893_18805	COG3132	Protein of unknown function, DUF480
BA893_18815	COG1879	ABC-type sugar transport system periplasmic component
BA893_18820	COG2205	protein histidine kinase activity
BA893_18820	COG0784	Response regulator, receiver
BA893_18850	COG1522	sequence-specific DNA binding
BA893_18870	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BA893_18875	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BA893_18880	COG1280	lysine exporter protein (LysE YggA)
BA893_18890	COG0183	Belongs to the thiolase family
BA893_18920	COG0243	molybdopterin cofactor binding
BA893_18930	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
BA893_18935	COG3850	Histidine kinase
BA893_18940	COG2197	response regulator
BA893_18955	COG2195	Cleaves the N-terminal amino acid of tripeptides
BA893_18975	COG0840	transmembrane signaling receptor activity
BA893_18985	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BA893_18995	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
BA893_19000	COG0840	transmembrane signaling receptor activity
BA893_19005	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
BA893_19010	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
BA893_19030	COG2897	thiosulfate sulfurtransferase activity
BA893_19040	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BA893_19060	COG0038	chloride channel
BA893_19075	COG4989	oxidoreductase activity
BA893_19080	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
BA893_19080	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
BA893_19085	COG0516	GMP reductase activity
BA893_19105	COG2003	Belongs to the UPF0758 family
BA893_19145	COG2807	transmembrane transport
BA893_19150	COG1082	Xylose isomerase domain protein TIM barrel
BA893_19155	COG1609	Transcriptional regulator
BA893_19170	COG0477	Major facilitator Superfamily
BA893_19170	COG2814	Major facilitator Superfamily
BA893_19180	COG0673	inositol 2-dehydrogenase activity
BA893_19195	COG0641	radical SAM
BA893_19205	COG2723	6-phospho-beta-galactosidase activity
BA893_19210	COG1917	Cupin 2, conserved barrel domain protein
BA893_19210	COG4977	sequence-specific DNA binding
BA893_19225	COG2207	Transcriptional regulator
BA893_19235	COG0833	amino acid
BA893_19250	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BA893_19310	COG2084	Dehydrogenase
BA893_19345	COG0477	Major facilitator Superfamily
BA893_19350	COG1902	pentaerythritol trinitrate reductase activity
BA893_19365	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
BA893_19370	COG2207	Transcriptional regulator
BA893_19375	COG0673	inositol 2-dehydrogenase activity
BA893_19380	COG4702	Belongs to the UPF0303 family
BA893_19400	COG1082	Xylose isomerase domain protein TIM barrel
BA893_19405	COG0673	inositol 2-dehydrogenase activity
BA893_19410	COG2814	Major facilitator Superfamily
BA893_19410	COG0477	Major facilitator Superfamily
BA893_19430	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BA893_19435	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BA893_19440	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
BA893_19445	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BA893_19450	COG0800	Aldolase
BA893_19465	COG0583	DNA-binding transcription factor activity
BA893_19470	COG4771	TonB-dependent receptor
BA893_19475	COG4607	ABC-type enterochelin transport system periplasmic component
BA893_19500	COG3504	Conjugal transfer protein
BA893_19570	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
BA893_19575	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BA893_19585	COG0848	biopolymer transport protein
BA893_19590	COG0811	peptide transport
BA893_19595	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
BA893_19600	COG3721	Heme iron utilization protein
BA893_19605	COG0748	coenzyme F420 binding
BA893_19610	COG4771	TonB-dependent receptor
BA893_19610	COG1629	transport
BA893_19610	COG1629	transport
BA893_19610	COG4771	TonB-dependent receptor
BA893_19615	COG0516	GMP reductase activity
BA893_19620	COG4974	Belongs to the 'phage' integrase family
BA893_19630	COG1073	alpha beta
BA893_19650	COG1902	pentaerythritol trinitrate reductase activity
BA893_19660	COG1073	alpha beta
BA893_19665	COG1073	alpha beta
BA893_19675	COG2207	Transcriptional regulator
BA893_19680	COG1414	Transcriptional regulator
BA893_19685	COG2267	carboxylic ester hydrolase activity
BA893_19690	COG0183	Belongs to the thiolase family
BA893_19695	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
BA893_19700	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
BA893_19710	COG4948	Mandelate Racemase Muconate Lactonizing
BA893_19745	COG2814	Major facilitator Superfamily
BA893_19750	COG0583	DNA-binding transcription factor activity
BA893_19755	COG1473	amidohydrolase
BA893_19760	COG1288	antiporter activity
BA893_19785	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
BA893_19810	COG0579	oxidoreductase
BA893_19830	COG0583	DNA-binding transcription factor activity
BA893_19840	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BA893_19845	COG0667	Aldo Keto reductase
BA893_19860	COG0583	DNA-binding transcription factor activity
BA893_19865	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BA893_19875	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
BA893_19890	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
BA893_19895	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
BA893_19900	COG2159	amidohydrolase
BA893_19905	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
BA893_19935	COG4771	TonB-dependent receptor
BA893_19940	COG0583	DNA-binding transcription factor activity
BA893_19950	COG2197	response regulator
BA893_19995	COG1132	(ABC) transporter
BA893_20000	COG1132	(ABC) transporter
BA893_20005	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BA893_20065	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BA893_20070	COG0402	S-adenosylhomocysteine deaminase activity
BA893_20075	COG0656	L-ascorbic acid biosynthetic process
BA893_20080	COG1349	DNA-binding transcription factor activity
BA893_20085	COG2084	Dehydrogenase
BA893_20090	COG3395	kinase activity
BA893_20095	COG0235	Class ii aldolase
BA893_20100	COG3622	Belongs to the hyi family
BA893_20105	COG2610	gluconate transmembrane transporter activity
BA893_20110	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
BA893_20110	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BA893_20135	COG1355	regulation of microtubule-based process
BA893_20150	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
BA893_20160	COG2814	Major facilitator Superfamily
BA893_20170	COG0840	transmembrane signaling receptor activity
BA893_20180	COG0110	maltose O-acetyltransferase activity
BA893_20190	COG0583	DNA-binding transcription factor activity
BA893_20200	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BA893_20200	COG2205	protein histidine kinase activity
BA893_20265	COG3474	cytochrome
BA893_20275	COG3264	Mechanosensitive ion channel
BA893_20275	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
BA893_20285	COG0583	DNA-binding transcription factor activity
BA893_20310	COG4948	Mandelate Racemase Muconate Lactonizing
BA893_20320	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
BA893_20355	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
BA893_20360	COG1960	acyl-CoA dehydrogenase activity
BA893_20370	COG0183	Belongs to the thiolase family
BA893_20380	COG1960	acyl-CoA dehydrogenase activity
BA893_20385	COG1024	Enoyl-CoA hydratase
BA893_20400	COG1028	Short-chain dehydrogenase reductase Sdr
BA893_20405	COG1309	transcriptional regulator
BA893_20410	COG1012	belongs to the aldehyde dehydrogenase family
BA893_20425	COG4176	ABC-type proline glycine betaine transport system permease component
BA893_20430	COG4175	Glycine betaine
BA893_20430	COG0517	IMP dehydrogenase activity
BA893_20435	COG0330	HflC and HflK could
BA893_20445	COG3300	MHYT domain
BA893_20445	COG5001	Diguanylate cyclase
BA893_20470	COG2207	Transcriptional regulator
BA893_20475	COG2197	response regulator
BA893_20480	COG0515	serine threonine protein kinase
BA893_20480	COG2815	serine threonine protein kinase
BA893_20485	COG2223	nitrite transmembrane transporter activity
BA893_20495	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BA893_20505	COG0243	molybdopterin cofactor binding
BA893_20625	COG3265	gluconokinase activity
BA893_20640	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
BA893_20645	COG1280	lysine exporter protein (LysE YggA)
BA893_20655	COG4628	conserved protein (DUF2132)
BA893_20660	COG1278	Cold shock
BA893_20680	COG0784	Response regulator, receiver
BA893_20680	COG4191	Histidine kinase
BA893_20685	COG4657	Part of a membrane complex involved in electron transport
BA893_20690	COG2878	Part of a membrane complex involved in electron transport
BA893_20700	COG4658	electron transport chain
BA893_20755	COG5001	Diguanylate cyclase
BA893_20760	COG1869	D-ribose catabolic process
BA893_20765	COG1129	ABC transporter
BA893_20770	COG1172	Belongs to the binding-protein-dependent transport system permease family
BA893_20775	COG1879	ABC-type sugar transport system periplasmic component
BA893_20780	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BA893_20785	COG1609	Transcriptional regulator
BA893_20795	COG0789	Transcriptional regulator
BA893_20805	COG1289	transmembrane transporter activity
BA893_20810	COG0210	DNA helicase
BA893_20815	COG1803	Methylglyoxal synthase
BA893_20820	COG1879	ABC-type sugar transport system periplasmic component
BA893_20825	COG2198	Histidine kinase
BA893_20825	COG0784	Response regulator, receiver
BA893_20825	COG2205	protein histidine kinase activity
BA893_20845	COG3119	arylsulfatase activity
BA893_20850	COG0641	radical SAM
BA893_20855	COG0714	Associated with various cellular activities
BA893_20890	COG1597	lipid kinase activity
BA893_20900	COG2223	nitrite transmembrane transporter activity
BA893_20910	COG0501	Belongs to the peptidase M48B family
BA893_20915	COG1704	LemA family
BA893_20920	COG3069	C4-dicarboxylate transmembrane transporter activity
BA893_20930	COG1214	PFAM Peptidase M22, glycoprotease
BA893_20930	COG0456	acetyltransferase
BA893_20940	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
BA893_20950	COG3300	MHYT domain
BA893_20950	COG5001	Diguanylate cyclase
BA893_20960	COG3706	GGDEF domain
BA893_20995	COG3788	relative of glutathione S-transferase, MAPEG superfamily
BA893_21015	COG0471	metal ion transport
BA893_21025	COG3290	protein histidine kinase activity
BA893_21040	COG0069	glutamate synthase activity
BA893_21045	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
BA893_21075	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
BA893_21095	COG4670	ketone body catabolic process
BA893_21100	COG1028	Short-chain dehydrogenase reductase Sdr
BA893_21105	COG1737	Transcriptional regulator
BA893_21115	COG0765	amino acid transport
BA893_21120	COG0765	amino acid transport
BA893_21130	COG4166	transmembrane transport
BA893_21135	COG0601	transmembrane transport
BA893_21140	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BA893_21145	COG4172	Belongs to the ABC transporter superfamily
BA893_21160	COG2205	protein histidine kinase activity
BA893_21165	COG0745	RESPONSE REGULATOR receiver
BA893_21175	COG1846	Transcriptional regulator
BA893_21180	COG2130	NADP-dependent
BA893_21185	COG0420	3'-5' exonuclease activity
BA893_21190	COG0419	ATPase involved in DNA repair
BA893_21210	COG1733	regulation of RNA biosynthetic process
BA893_21215	COG0702	epimerase
BA893_21225	COG3040	lipid binding
BA893_21240	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
BA893_21255	COG2425	protein containing a von Willebrand factor type A (vWA) domain
BA893_21265	COG0583	DNA-binding transcription factor activity
BA893_21270	COG0277	FAD linked oxidase domain protein
BA893_21310	COG3706	GGDEF domain
BA893_21310	COG0745	RESPONSE REGULATOR receiver
BA893_21320	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
BA893_21320	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
BA893_21360	COG5001	Diguanylate cyclase
BA893_21365	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BA893_21370	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BA893_21375	COG2146	nitrite reductase [NAD(P)H] activity
BA893_21380	COG2116	formate transmembrane transporter activity
BA893_21400	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
BA893_21420	COG0477	Major facilitator Superfamily
BA893_21425	COG3118	belongs to the thioredoxin family
BA893_21430	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BA893_21450	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
BA893_21455	COG0583	DNA-binding transcription factor activity
BA893_21505	COG1328	CTP reductase activity
BA893_21510	COG0602	queuosine metabolic process
BA893_21515	COG0534	Mate efflux family protein
BA893_21520	COG2207	Transcriptional regulator
BA893_21530	COG4067	protein conserved in archaea
BA893_21530	COG0189	ligase activity
BA893_21540	COG1492	cobalamin metabolic process
BA893_21545	COG0725	ABC transporter, periplasmic molybdate-binding protein
BA893_21550	COG4149	molybdate abc transporter
BA893_21555	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
BA893_21565	COG5001	Diguanylate cyclase
BA893_21565	COG3706	GGDEF domain
BA893_21565	COG2203	Gaf domain
BA893_21565	COG4251	negative regulation of phosphorylation
BA893_21570	COG3706	GGDEF domain
BA893_21585	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
BA893_21590	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
BA893_21600	COG0745	RESPONSE REGULATOR receiver
BA893_21645	COG2801	Transposase and inactivated derivatives
BA893_21650	COG0023	Translation Initiation Factor
BA893_21660	COG1181	Belongs to the D-alanine--D-alanine ligase family
BA893_21670	COG0045	succinate-CoA ligase (ADP-forming) activity
BA893_21670	COG1042	CoA-binding domain protein
BA893_21670	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BA893_21675	COG0583	DNA-binding transcription factor activity
BA893_21685	COG3447	MASE1 domain protein
BA893_21685	COG5001	Diguanylate cyclase
BA893_21685	COG5002	protein histidine kinase activity
BA893_21690	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
BA893_21695	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
BA893_21700	COG1984	allophanate hydrolase subunit 2
BA893_21710	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
BA893_21715	COG4181	ATPase activity
BA893_21725	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
BA893_21730	COG3300	MHYT domain
BA893_21730	COG5001	Diguanylate cyclase
BA893_21755	COG1324	tolerance protein
BA893_21775	COG2050	protein possibly involved in aromatic compounds catabolism
BA893_21780	COG0501	Belongs to the peptidase M48B family
BA893_21790	COG2067	long-chain fatty acid transport protein
BA893_21795	COG2267	carboxylic ester hydrolase activity
BA893_21815	COG0737	Belongs to the 5'-nucleotidase family
BA893_21820	COG3593	DNA synthesis involved in DNA repair
BA893_21830	COG0583	DNA-binding transcription factor activity
BA893_21835	COG2116	formate transmembrane transporter activity
BA893_21840	COG2353	YceI-like domain
BA893_21845	COG3038	cytochrome b561
BA893_21860	COG4943	cyclic-guanylate-specific phosphodiesterase activity
BA893_21865	COG0513	Belongs to the DEAD box helicase family
BA893_21870	COG3124	Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP
BA893_21875	COG0840	transmembrane signaling receptor activity
BA893_21880	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BA893_21895	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BA893_21900	COG2759	Belongs to the formate--tetrahydrofolate ligase family
BA893_21905	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
BA893_21915	COG2207	Transcriptional regulator
BA893_21920	COG1979	alcohol dehydrogenase
BA893_21930	COG1126	abc transporter atp-binding protein
BA893_21935	COG0765	amino acid transport
BA893_21940	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BA893_21945	COG0765	amino acid transport
BA893_21960	COG1609	Transcriptional regulator
BA893_21965	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BA893_21965	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
BA893_21970	COG1105	Belongs to the carbohydrate kinase PfkB family
BA893_21975	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
BA893_21975	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BA893_21975	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BA893_21990	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BA893_22000	COG0404	The glycine cleavage system catalyzes the degradation of glycine
BA893_22010	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
BA893_22015	COG0509	glycine decarboxylation via glycine cleavage system
BA893_22080	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BA893_22090	COG0814	amino acid
BA893_22120	COG0443	Heat shock 70 kDa protein
BA893_22160	COG1349	DNA-binding transcription factor activity
BA893_22165	COG0673	inositol 2-dehydrogenase activity
BA893_22170	COG4702	Belongs to the UPF0303 family
BA893_22185	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BA893_22190	COG0022	dehydrogenase e1 component
BA893_22190	COG0508	dehydrogenase complex catalyzes the overall conversion of
BA893_22205	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BA893_22205	COG0574	Belongs to the PEP-utilizing enzyme family
BA893_22210	COG0543	2 iron, 2 sulfur cluster binding
BA893_22220	COG3383	formate dehydrogenase (NAD+) activity
BA893_22250	COG3604	Transcriptional regulator
BA893_22260	COG3949	Membrane
BA893_22265	COG1404	Belongs to the peptidase S8 family
BA893_22280	COG0583	DNA-binding transcription factor activity
BA893_22290	COG1115	amino acid carrier protein
BA893_22295	COG4160	amino acid transport
BA893_22300	COG4215	(ABC) transporter
BA893_22305	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BA893_22310	COG1126	abc transporter atp-binding protein
BA893_22320	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
BA893_22345	COG2040	homocysteine
BA893_22350	COG0531	amino acid
BA893_22360	COG1902	pentaerythritol trinitrate reductase activity
BA893_22365	COG0109	protoheme IX farnesyltransferase activity
BA893_22370	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
BA893_22375	COG1845	cytochrome c oxidase, subunit III
BA893_22380	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
BA893_22385	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
BA893_22390	COG1028	Short-chain dehydrogenase reductase Sdr
BA893_22405	COG1024	Enoyl-CoA hydratase
BA893_22410	COG1960	acyl-CoA dehydrogenase activity
BA893_22420	COG0183	Belongs to the thiolase family
BA893_22430	COG1960	acyl-CoA dehydrogenase activity
BA893_22435	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
BA893_22450	COG5413	integral membrane protein
BA893_22465	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BA893_22475	COG0513	Belongs to the DEAD box helicase family
BA893_22480	COG3437	response regulator, receiver
BA893_22485	COG3850	Histidine kinase
BA893_22485	COG3437	response regulator, receiver
BA893_22485	COG4999	Histidine kinase
BA893_22485	COG2205	protein histidine kinase activity
BA893_22490	COG1454	alcohol dehydrogenase
BA893_22495	COG0235	Class ii aldolase
BA893_22500	COG1070	Carbohydrate kinase
BA893_22510	COG1349	DNA-binding transcription factor activity
BA893_22515	COG1320	monovalent cation:proton antiporter activity
BA893_22520	COG2212	antiporter activity
BA893_22540	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
BA893_22540	COG2111	Na H antiporter
BA893_22545	COG0589	response to stress
BA893_22550	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
BA893_22560	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
BA893_22595	COG0549	Belongs to the carbamate kinase family
BA893_22600	COG1304	FMN binding
BA893_22605	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
BA893_22620	COG2807	transmembrane transport
BA893_22625	COG0583	DNA-binding transcription factor activity
BA893_22645	COG5002	protein histidine kinase activity
BA893_22650	COG0590	tRNA wobble adenosine to inosine editing
BA893_22655	COG1953	Uracil, thiamine, allantoin
BA893_22665	COG0745	RESPONSE REGULATOR receiver
BA893_22665	COG3706	GGDEF domain
BA893_22670	COG0730	response to heat
BA893_22680	COG1414	Transcriptional regulator
BA893_22695	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
BA893_22700	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BA893_22705	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BA893_22720	COG2855	membrane
BA893_22740	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BA893_22750	COG1070	Carbohydrate kinase
BA893_22785	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
BA893_22800	COG2207	Transcriptional regulator
BA893_22815	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
BA893_22820	COG1064	alcohol dehydrogenase
BA893_22830	COG1760	l-serine dehydratase
BA893_22845	COG0404	The glycine cleavage system catalyzes the degradation of glycine
BA893_22845	COG0446	pyridine nucleotide-disulphide oxidoreductase
BA893_22860	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
BA893_22865	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BA893_22875	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
BA893_22895	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BA893_22900	COG1012	belongs to the aldehyde dehydrogenase family
BA893_22915	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BA893_22920	COG0789	Transcriptional regulator
BA893_22930	COG0697	spore germination
BA893_22955	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
BA893_22970	COG0356	it plays a direct role in the translocation of protons across the membrane
BA893_22985	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
BA893_22990	COG0656	L-ascorbic acid biosynthetic process
BA893_23000	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BA893_23010	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
BA893_23015	COG2181	nitrate reductase activity
BA893_23015	COG0247	lactate metabolic process
BA893_23020	COG0446	pyridine nucleotide-disulphide oxidoreductase
BA893_23020	COG1902	pentaerythritol trinitrate reductase activity
BA893_23045	COG1454	alcohol dehydrogenase
BA893_23050	COG0837	glucose binding
BA893_23065	COG1119	ATPase activity
BA893_23070	COG2200	EAL domain
BA893_23085	COG0513	Belongs to the DEAD box helicase family
BA893_23090	COG0523	cobalamin synthesis protein
BA893_23095	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
BA893_23105	COG0133	tryptophan synthase activity
BA893_23115	COG3530	Putative quorum-sensing-regulated virulence factor
BA893_23140	COG3186	Phenylalanine-4-hydroxylase
BA893_23145	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BA893_23150	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
BA893_23170	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
BA893_23175	COG1454	alcohol dehydrogenase
BA893_23180	COG2133	pyrroloquinoline quinone binding
BA893_23190	COG0783	Belongs to the Dps family
BA893_23205	COG1136	(ABC) transporter
BA893_23205	COG0577	efflux transmembrane transporter activity
BA893_23230	COG1278	Cold shock
BA893_23260	COG0545	Peptidyl-prolyl cis-trans isomerase
BA893_23265	COG0109	protoheme IX farnesyltransferase activity
BA893_23270	COG1612	heme a metabolic process
BA893_23295	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
BA893_23310	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BA893_23315	COG1280	lysine exporter protein (LysE YggA)
BA893_23335	COG0179	Fumarylacetoacetate (FAA) hydrolase
BA893_23355	COG0583	DNA-binding transcription factor activity
BA893_23360	COG5001	Diguanylate cyclase
BA893_23365	COG0739	heme binding
BA893_23400	COG0814	amino acid
BA893_23420	COG0747	negative chemotaxis
BA893_23430	COG0798	PFAM Bile acid sodium symporter
BA893_23445	COG1131	(ABC) transporter
BA893_23450	COG0842	Transport permease protein
BA893_23460	COG3383	formate dehydrogenase (NAD+) activity
BA893_23480	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BA893_23490	COG2871	sodium ion transport
BA893_23500	COG3706	GGDEF domain
BA893_23505	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BA893_23510	COG2067	long-chain fatty acid transport protein
BA893_23515	COG0589	response to stress
BA893_23520	COG2249	NAD(P)H dehydrogenase (quinone) activity
BA893_23545	COG0366	Alpha amylase catalytic
BA893_23550	COG1979	alcohol dehydrogenase
BA893_23565	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
BA893_23575	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BA893_23585	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
BA893_23610	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BA893_23620	COG4948	Mandelate Racemase Muconate Lactonizing
BA893_23625	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BA893_23640	COG1902	pentaerythritol trinitrate reductase activity
BA893_23645	COG0583	DNA-binding transcription factor activity
BA893_23650	COG1063	alcohol dehydrogenase
BA893_23665	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
BA893_23675	COG1403	HNH endonuclease
BA893_23680	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BA893_23685	COG0784	Response regulator, receiver
BA893_23685	COG0835	chemotaxis
BA893_23690	COG0748	coenzyme F420 binding
BA893_23725	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
BA893_23730	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
BA893_23735	COG0633	Ferredoxin
BA893_23735	COG3217	Mosc domain protein beta barrel domain protein
BA893_23735	COG0633	Ferredoxin
BA893_23735	COG3217	Mosc domain protein beta barrel domain protein
BA893_23745	COG0418	dihydroorotase activity
BA893_23750	COG2354	Protein conserved in bacteria
BA893_23760	COG2176	DNA-directed DNA polymerase activity
BA893_23795	COG0583	DNA-binding transcription factor activity
BA893_23800	COG4974	Belongs to the 'phage' integrase family
BA893_23805	COG0583	DNA-binding transcription factor activity
BA893_23810	COG1115	amino acid carrier protein
BA893_23820	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BA893_23825	COG1012	belongs to the aldehyde dehydrogenase family
BA893_23830	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BA893_23840	COG0110	maltose O-acetyltransferase activity
BA893_23845	COG1609	Transcriptional regulator
BA893_23850	COG0561	phosphatase activity
BA893_23855	COG1349	DNA-binding transcription factor activity
BA893_23860	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BA893_23870	COG4580	involved in the transport of maltose and maltodextrins
BA893_23875	COG1874	Beta-galactosidase
BA893_23885	COG3833	ABC-type maltose transport systems, permease component
BA893_23890	COG1175	transmembrane transport
BA893_23895	COG2182	Extracellular solute-binding protein
BA893_23930	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BA893_23935	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BA893_23945	COG2207	Transcriptional regulator
BA893_23950	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BA893_23950	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BA893_23950	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BA893_23955	COG1482	cell wall glycoprotein biosynthetic process
BA893_23960	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BA893_23990	COG0840	transmembrane signaling receptor activity
BA893_23995	COG4580	involved in the transport of maltose and maltodextrins
BA893_24000	COG2152	Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man- Glc) to mannose 1-phosphate (Man1P) and glucose
BA893_24005	COG2152	Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man- Glc) to mannose 1-phosphate (Man1P) and glucose
BA893_24015	COG1609	Transcriptional regulator
BA893_24020	COG3842	ATPase activity
BA893_24035	COG0395	ABC-type sugar transport system, permease component
BA893_24040	COG1175	transmembrane transport
BA893_24065	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BA893_24085	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BA893_24095	COG0589	response to stress
BA893_24100	COG4221	oxidoreductase activity
BA893_24105	COG1028	Short-chain dehydrogenase reductase Sdr
BA893_24110	COG0579	oxidoreductase
BA893_24115	COG1027	Aspartate ammonia-lyase
BA893_24125	COG1126	abc transporter atp-binding protein
BA893_24140	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BA893_24160	COG0028	Belongs to the TPP enzyme family
BA893_24165	COG1028	Short-chain dehydrogenase reductase Sdr
BA893_24180	COG1012	belongs to the aldehyde dehydrogenase family
BA893_24195	COG0765	amino acid transport
BA893_24200	COG4597	amino acid ABC transporter
BA893_24205	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BA893_24210	COG0583	DNA-binding transcription factor activity
BA893_24225	COG3344	reverse transcriptase
BA893_24305	COG0071	Belongs to the small heat shock protein (HSP20) family
BA893_24325	COG1984	allophanate hydrolase subunit 2
BA893_24330	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
BA893_24335	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
BA893_24365	COG1448	Aminotransferase
BA893_24375	COG1522	sequence-specific DNA binding
BA893_24405	COG0741	lytic transglycosylase activity
BA893_24440	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BA893_24450	COG3437	response regulator, receiver
BA893_24450	COG3850	Histidine kinase
BA893_24450	COG2205	protein histidine kinase activity
BA893_24450	COG4999	Histidine kinase
BA893_24465	COG3833	ABC-type maltose transport systems, permease component
BA893_24470	COG1175	transmembrane transport
BA893_24480	COG3842	ATPase activity
BA893_24485	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
BA893_24510	COG0438	transferase activity, transferring glycosyl groups
BA893_24545	COG1309	transcriptional regulator
BA893_24550	COG2130	NADP-dependent
BA893_24560	COG2084	Dehydrogenase
BA893_24565	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BA893_24570	COG3241	Transfers electrons from cytochrome c551 to cytochrome oxidase
BA893_24580	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BA893_24605	COG0583	DNA-binding transcription factor activity
BA893_24610	COG1132	(ABC) transporter
BA893_24615	COG4774	siderophore transport
BA893_24620	COG1120	ATPase activity
BA893_24625	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
BA893_24640	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BA893_24660	COG2197	response regulator
BA893_24670	COG0714	Associated with various cellular activities
BA893_24690	COG2304	oxidoreductase activity
BA893_24700	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
BA893_24705	COG0581	inorganic phosphate transmembrane transporter activity
BA893_24710	COG0573	inorganic phosphate transmembrane transporter activity
BA893_24715	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
BA893_24720	COG0840	transmembrane signaling receptor activity
BA893_24725	COG0513	Belongs to the DEAD box helicase family
BA893_24735	COG1376	ErfK ybiS ycfS ynhG family protein
BA893_24735	COG1388	LysM domain
BA893_24740	COG0415	Belongs to the DNA photolyase family
BA893_24745	COG0789	Transcriptional regulator
BA893_24750	COG3272	Protein of unknown function (DUF1722)
BA893_24755	COG0813	purine-nucleoside phosphorylase activity
BA893_24770	COG3706	GGDEF domain
BA893_24780	COG1566	PFAM secretion protein HlyD family protein
BA893_24785	COG4720	Psort location CytoplasmicMembrane, score
BA893_24795	COG0348	domain, Protein
BA893_24800	COG0437	4 iron, 4 sulfur cluster binding
BA893_24805	COG1247	-acetyltransferase
BA893_24825	COG1067	ATP-dependent peptidase activity
BA893_24835	COG1505	serine-type exopeptidase activity
BA893_24840	COG0583	DNA-binding transcription factor activity
BA893_24845	COG1620	l-lactate permease
BA893_24850	COG1304	FMN binding
BA893_24860	COG0668	transmembrane transport
BA893_24875	COG1278	Cold shock
BA893_24965	COG4220	transposase activity
BA893_24980	COG3772	lysozyme