locus-tag class description BA894_00005 PF00308 Bacterial dnaA protein BA894_00005 PF11638 DnaA N-terminal domain BA894_00005 PF08299 Bacterial dnaA protein helix-turn-helix BA894_00010 PF02767 DNA polymerase III beta subunit, central domain BA894_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain BA894_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain BA894_00015 PF02463 RecF/RecN/SMC N terminal domain BA894_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA894_00020 PF01751 Toprim domain BA894_00020 PF00204 DNA gyrase B BA894_00020 PF00986 DNA gyrase B subunit, carboxyl terminus BA894_00020 PF18053 DNA gyrase B subunit insert domain BA894_00030 PF00011 Hsp20/alpha crystallin family BA894_00035 PF00155 Aminotransferase class I and II BA894_00040 PF00128 Alpha amylase, catalytic domain BA894_00045 PF05746 DALR anticodon binding domain BA894_00045 PF02092 Glycyl-tRNA synthetase beta subunit BA894_00050 PF02091 Glycyl-tRNA synthetase alpha subunit BA894_00055 PF01169 Uncharacterized protein family UPF0016 BA894_00065 PF01206 Sulfurtransferase TusA BA894_00075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_00075 PF03466 LysR substrate binding domain BA894_00080 PF00107 Zinc-binding dehydrogenase BA894_00080 PF08240 Alcohol dehydrogenase GroES-like domain BA894_00085 PF00108 Thiolase, N-terminal domain BA894_00085 PF02803 Thiolase, C-terminal domain BA894_00090 PF00378 Enoyl-CoA hydratase/isomerase BA894_00090 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BA894_00090 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BA894_00095 PF01205 Uncharacterized protein family UPF0029 BA894_00095 PF09186 Domain of unknown function (DUF1949) BA894_00100 PF02386 Cation transport protein BA894_00105 PF12724 Flavodoxin domain BA894_00140 PF00367 phosphotransferase system, EIIB BA894_00140 PF02378 Phosphotransferase system, EIIC BA894_00145 PF00512 His Kinase A (phospho-acceptor) domain BA894_00145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA894_00150 PF00486 Transcriptional regulatory protein, C terminal BA894_00150 PF00072 Response regulator receiver domain BA894_00155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_00155 PF03466 LysR substrate binding domain BA894_00160 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BA894_00160 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BA894_00165 PF04380 Membrane fusogenic activity BA894_00170 PF00873 AcrB/AcrD/AcrF family BA894_00175 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BA894_00180 PF00440 Bacterial regulatory proteins, tetR family BA894_00185 PF00580 UvrD/REP helicase N-terminal domain BA894_00185 PF13361 UvrD-like helicase C-terminal domain BA894_00190 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BA894_00225 PF00005 ABC transporter BA894_00225 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA894_00230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA894_00240 PF12911 N-terminal TM domain of oligopeptide transport permease C BA894_00240 PF00528 Binding-protein-dependent transport system inner membrane component BA894_00250 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BA894_00250 PF00356 Bacterial regulatory proteins, lacI family BA894_00255 PF00920 Dehydratase family BA894_00260 PF01202 Shikimate kinase BA894_00265 PF02447 GntP family permease BA894_00270 PF01081 KDPG and KHG aldolase BA894_00275 PF06228 Haem utilisation ChuX/HutX BA894_00280 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA894_00280 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BA894_00285 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ BA894_00290 PF01432 Peptidase family M3 BA894_00295 PF01037 Lrp/AsnC ligand binding domain BA894_00300 PF04445 Putative SAM-dependent methyltransferase BA894_00310 PF00892 EamA-like transporter family BA894_00315 PF00582 Universal stress protein family BA894_00320 PF00210 Ferritin-like domain BA894_00325 PF10625 Universal stress protein B (UspB) BA894_00335 PF08721 TnsA endonuclease C terminal BA894_00335 PF08722 TnsA endonuclease N terminal BA894_00345 PF00665 Integrase core domain BA894_00350 PF01527 Transposase BA894_00360 PF11426 Tn7 transposition regulator TnsC BA894_00360 PF13401 AAA domain BA894_00380 PF01381 Helix-turn-helix BA894_00395 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BA894_00410 PF00005 ABC transporter BA894_00415 PF01032 FecCD transport family BA894_00420 PF01032 FecCD transport family BA894_00425 PF01497 Periplasmic binding protein BA894_00430 PF07660 Secretin and TonB N terminus short domain BA894_00430 PF00593 TonB dependent receptor BA894_00430 PF07715 TonB-dependent Receptor Plug Domain BA894_00435 PF00593 TonB dependent receptor BA894_00435 PF07715 TonB-dependent Receptor Plug Domain BA894_00440 PF02655 ATP-grasp domain BA894_00440 PF00206 Lyase BA894_00445 PF04183 IucA / IucC family BA894_00445 PF06276 Ferric iron reductase FhuF-like transporter BA894_00450 PF07690 Major Facilitator Superfamily BA894_00455 PF04183 IucA / IucC family BA894_00455 PF06276 Ferric iron reductase FhuF-like transporter BA894_00460 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BA894_00460 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BA894_00495 PF00263 Bacterial type II and III secretion system protein BA894_00495 PF13629 Pilus formation protein N terminal region BA894_00495 PF04972 BON domain BA894_00510 PF00437 Type II/IV secretion system protein BA894_00545 PF01243 Pyridoxamine 5'-phosphate oxidase BA894_00555 PF00664 ABC transporter transmembrane region BA894_00555 PF00005 ABC transporter BA894_00560 PF00005 ABC transporter BA894_00560 PF00664 ABC transporter transmembrane region BA894_00570 PF00990 Diguanylate cyclase, GGDEF domain BA894_00570 PF00563 EAL domain BA894_00570 PF03707 Bacterial signalling protein N terminal repeat BA894_00580 PF02646 RmuC family BA894_00585 PF01209 ubiE/COQ5 methyltransferase family BA894_00590 PF02036 SCP-2 sterol transfer family BA894_00595 PF03109 ABC1 family BA894_00600 PF02416 mttA/Hcf106 family BA894_00605 PF02416 mttA/Hcf106 family BA894_00610 PF00902 Sec-independent protein translocase protein (TatC) BA894_00615 PF03471 Transporter associated domain BA894_00615 PF00999 Sodium/hydrogen exchanger family BA894_00615 PF02080 TrkA-C domain BA894_00620 PF01026 TatD related DNase BA894_00625 PF00490 Delta-aminolevulinic acid dehydratase BA894_00640 PF01612 3'-5' exonuclease BA894_00640 PF00476 DNA polymerase family A BA894_00640 PF01367 5'-3' exonuclease, C-terminal SAM fold BA894_00640 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BA894_00645 PF01926 50S ribosome-binding GTPase BA894_00650 PF00034 Cytochrome c BA894_00660 PF04220 Der GTPase activator (YihI) BA894_00665 PF10675 Protein of unknown function (DUF2489) BA894_00670 PF04055 Radical SAM superfamily BA894_00670 PF06969 HemN C-terminal domain BA894_00675 PF00962 Adenosine/AMP deaminase BA894_00680 PF03707 Bacterial signalling protein N terminal repeat BA894_00680 PF00563 EAL domain BA894_00680 PF00990 Diguanylate cyclase, GGDEF domain BA894_00685 PF00072 Response regulator receiver domain BA894_00685 PF00158 Sigma-54 interaction domain BA894_00685 PF02954 Bacterial regulatory protein, Fis family BA894_00690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA894_00690 PF00989 PAS fold BA894_00690 PF00512 His Kinase A (phospho-acceptor) domain BA894_00700 PF00120 Glutamine synthetase, catalytic domain BA894_00700 PF03951 Glutamine synthetase, beta-Grasp domain BA894_00720 PF03631 Virulence factor BrkB BA894_00725 PF02580 D-Tyr-tRNA(Tyr) deacylase BA894_00730 PF09500 Putative thioesterase (yiiD_Cterm) BA894_00730 PF00583 Acetyltransferase (GNAT) family BA894_00740 PF01293 Phosphoenolpyruvate carboxykinase BA894_00745 PF01430 Hsp33 protein BA894_00750 PF01479 S4 domain BA894_00755 PF11356 Type II secretion system protein C BA894_00760 PF03958 Bacterial type II/III secretion system short domain BA894_00760 PF00263 Bacterial type II and III secretion system protein BA894_00765 PF00437 Type II/IV secretion system protein BA894_00770 PF00482 Type II secretion system (T2SS), protein F BA894_00775 PF07963 Prokaryotic N-terminal methylation motif BA894_00775 PF08334 Type II secretion system (T2SS), protein G BA894_00780 PF12019 Type II transport protein GspH BA894_00785 PF02501 Type II secretion system (T2SS), protein I BA894_00785 PF07963 Prokaryotic N-terminal methylation motif BA894_00790 PF11612 Type II secretion system (T2SS), protein J BA894_00790 PF07963 Prokaryotic N-terminal methylation motif BA894_00795 PF03934 Type II secretion system (T2SS), protein K BA894_00800 PF05134 Type II secretion system (T2SS), protein L BA894_00800 PF12693 GspL periplasmic domain BA894_00805 PF04612 Type II secretion system (T2SS), protein M BA894_00810 PF01203 Type II secretion system (T2SS), protein N BA894_00815 PF00459 Inositol monophosphatase family BA894_00820 PF00293 NUDIX domain BA894_00825 PF01521 Iron-sulphur cluster biosynthesis BA894_00825 PF01106 NifU-like domain BA894_00830 PF00156 Phosphoribosyl transferase domain BA894_00835 PF00561 alpha/beta hydrolase fold BA894_00845 PF17674 HHH domain BA894_00845 PF09371 Tex-like protein N-terminal domain BA894_00845 PF00575 S1 RNA binding domain BA894_00845 PF16921 Tex protein YqgF-like domain BA894_00855 PF01272 Transcription elongation factor, GreA/GreB, C-term BA894_00855 PF03449 Transcription elongation factor, N-terminal BA894_00865 PF00486 Transcriptional regulatory protein, C terminal BA894_00865 PF00072 Response regulator receiver domain BA894_00870 PF00512 His Kinase A (phospho-acceptor) domain BA894_00870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA894_00870 PF00672 HAMP domain BA894_00875 PF00860 Permease family BA894_00880 PF17191 RecG wedge domain BA894_00880 PF00271 Helicase conserved C-terminal domain BA894_00880 PF00270 DEAD/DEAH box helicase BA894_00885 PF12105 SpoU, rRNA methylase, C-terminal BA894_00885 PF00588 SpoU rRNA Methylase family BA894_00890 PF02824 TGS domain BA894_00890 PF04607 Region found in RelA / SpoT proteins BA894_00890 PF13291 ACT domain BA894_00895 PF01192 RNA polymerase Rpb6 BA894_00900 PF00625 Guanylate kinase BA894_00915 PF02472 Biopolymer transport protein ExbD/TolR BA894_00920 PF01618 MotA/TolQ/ExbB proton channel family BA894_00935 PF07715 TonB-dependent Receptor Plug Domain BA894_00935 PF00593 TonB dependent receptor BA894_00940 PF00528 Binding-protein-dependent transport system inner membrane component BA894_00945 PF12911 N-terminal TM domain of oligopeptide transport permease C BA894_00945 PF00528 Binding-protein-dependent transport system inner membrane component BA894_00950 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA894_01015 PF01555 DNA methylase BA894_01080 PF12706 Beta-lactamase superfamily domain BA894_01095 PF07690 Major Facilitator Superfamily BA894_01100 PF03466 LysR substrate binding domain BA894_01100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_01105 PF00248 Aldo/keto reductase family BA894_01110 PF00248 Aldo/keto reductase family BA894_01120 PF07690 Major Facilitator Superfamily BA894_01135 PF03781 Sulfatase-modifying factor enzyme 1 BA894_01145 PF08240 Alcohol dehydrogenase GroES-like domain BA894_01145 PF00107 Zinc-binding dehydrogenase BA894_01165 PF02129 X-Pro dipeptidyl-peptidase (S15 family) BA894_01170 PF00486 Transcriptional regulatory protein, C terminal BA894_01170 PF00072 Response regulator receiver domain BA894_01175 PF00512 His Kinase A (phospho-acceptor) domain BA894_01175 PF00672 HAMP domain BA894_01175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA894_01190 PF00248 Aldo/keto reductase family BA894_01195 PF00486 Transcriptional regulatory protein, C terminal BA894_01205 PF00529 HlyD membrane-fusion protein of T1SS BA894_01205 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BA894_01210 PF00873 AcrB/AcrD/AcrF family BA894_01215 PF07690 Major Facilitator Superfamily BA894_01220 PF12833 Helix-turn-helix domain BA894_01220 PF07883 Cupin domain BA894_01230 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BA894_01240 PF00248 Aldo/keto reductase family BA894_01245 PF00135 Carboxylesterase family BA894_01250 PF03466 LysR substrate binding domain BA894_01250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_01255 PF12706 Beta-lactamase superfamily domain BA894_01285 PF01381 Helix-turn-helix BA894_01320 PF01527 Transposase BA894_01325 PF00665 Integrase core domain BA894_01360 PF08340 Domain of unknown function (DUF1732) BA894_01360 PF03755 YicC-like family, N-terminal region BA894_01365 PF01138 3' exoribonuclease family, domain 1 BA894_01365 PF03725 3' exoribonuclease family, domain 2 BA894_01370 PF00156 Phosphoribosyl transferase domain BA894_01375 PF03279 Bacterial lipid A biosynthesis acyltransferase BA894_01380 PF00440 Bacterial regulatory proteins, tetR family BA894_01385 PF02441 Flavoprotein BA894_01385 PF04127 DNA / pantothenate metabolism flavoprotein BA894_01390 PF00672 HAMP domain BA894_01390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA894_01390 PF17200 Single Cache domain 2 BA894_01395 PF04002 RadC-like JAB domain BA894_01400 PF00830 Ribosomal L28 family BA894_01405 PF00471 Ribosomal protein L33 BA894_01415 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BA894_01415 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BA894_01415 PF06827 Zinc finger found in FPG and IleRS BA894_01420 PF05686 Glycosyl transferase family 90 BA894_01425 PF01467 Cytidylyltransferase-like BA894_01430 PF13439 Glycosyltransferase Family 4 BA894_01430 PF00534 Glycosyl transferases group 1 BA894_01435 PF00535 Glycosyl transferase family 2 BA894_01440 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BA894_01445 PF01219 Prokaryotic diacylglycerol kinase BA894_01455 PF02719 Polysaccharide biosynthesis protein BA894_01460 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BA894_01465 PF02350 UDP-N-acetylglucosamine 2-epimerase BA894_01470 PF08666 SAF domain BA894_01470 PF03102 NeuB family BA894_01480 PF00483 Nucleotidyl transferase BA894_01485 PF02348 Cytidylyltransferase BA894_01495 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) BA894_01500 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BA894_01505 PF03279 Bacterial lipid A biosynthesis acyltransferase BA894_01510 PF01370 NAD dependent epimerase/dehydratase family BA894_01515 PF06082 Exopolysaccharide biosynthesis protein YbjH BA894_01550 PF16363 GDP-mannose 4,6 dehydratase BA894_01555 PF00483 Nucleotidyl transferase BA894_01560 PF04321 RmlD substrate binding domain BA894_01565 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BA894_01585 PF00534 Glycosyl transferases group 1 BA894_01585 PF13439 Glycosyltransferase Family 4 BA894_01595 PF00132 Bacterial transferase hexapeptide (six repeats) BA894_01600 PF13439 Glycosyltransferase Family 4 BA894_01600 PF00534 Glycosyl transferases group 1 BA894_01610 PF00953 Glycosyl transferase family 4 BA894_01615 PF18412 Outer-membrane lipoprotein Wza C-terminal domain BA894_01615 PF10531 SLBB domain BA894_01615 PF02563 Polysaccharide biosynthesis/export protein BA894_01620 PF01451 Low molecular weight phosphotyrosine protein phosphatase BA894_01625 PF13614 AAA domain BA894_01625 PF13807 G-rich domain on putative tyrosine kinase BA894_01625 PF02706 Chain length determinant protein BA894_01630 PF02350 UDP-N-acetylglucosamine 2-epimerase BA894_01635 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BA894_01635 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BA894_01635 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BA894_01640 PF00132 Bacterial transferase hexapeptide (six repeats) BA894_01640 PF12464 Maltose acetyltransferase BA894_01640 PF14602 Hexapeptide repeat of succinyl-transferase BA894_01665 PF08240 Alcohol dehydrogenase GroES-like domain BA894_01665 PF00107 Zinc-binding dehydrogenase BA894_01680 PF02397 Bacterial sugar transferase BA894_01690 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BA894_01695 PF02719 Polysaccharide biosynthesis protein BA894_01700 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BA894_01700 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BA894_01700 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BA894_01705 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BA894_01705 PF00753 Metallo-beta-lactamase superfamily BA894_01705 PF10996 Beta-Casp domain BA894_01710 PF00121 Triosephosphate isomerase BA894_01720 PF05656 Protein of unknown function (DUF805) BA894_01730 PF08220 DeoR-like helix-turn-helix domain BA894_01730 PF00455 DeoR C terminal sensor domain BA894_01735 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BA894_01740 PF06005 Cell division protein ZapB BA894_01745 PF03737 Aldolase/RraA BA894_01750 PF01040 UbiA prenyltransferase family BA894_01755 PF00004 ATPase family associated with various cellular activities (AAA) BA894_01755 PF07724 AAA domain (Cdc48 subfamily) BA894_01760 PF00227 Proteasome subunit BA894_01770 PF00356 Bacterial regulatory proteins, lacI family BA894_01775 PF17764 3′ DNA-binding domain (3′BD) BA894_01775 PF18074 Primosomal protein N C-terminal domain BA894_01775 PF00270 DEAD/DEAH box helicase BA894_01775 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BA894_01775 PF00271 Helicase conserved C-terminal domain BA894_01780 PF01197 Ribosomal protein L31 BA894_01785 PF00338 Ribosomal protein S10p/S20e BA894_01790 PF00297 Ribosomal protein L3 BA894_01795 PF00573 Ribosomal protein L4/L1 family BA894_01800 PF00276 Ribosomal protein L23 BA894_01805 PF03947 Ribosomal Proteins L2, C-terminal domain BA894_01805 PF00181 Ribosomal Proteins L2, RNA binding domain BA894_01810 PF00203 Ribosomal protein S19 BA894_01815 PF00237 Ribosomal protein L22p/L17e BA894_01820 PF00189 Ribosomal protein S3, C-terminal domain BA894_01820 PF07650 KH domain BA894_01825 PF00252 Ribosomal protein L16p/L10e BA894_01830 PF00831 Ribosomal L29 protein BA894_01835 PF00366 Ribosomal protein S17 BA894_01840 PF00238 Ribosomal protein L14p/L23e BA894_01845 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BA894_01845 PF00467 KOW motif BA894_01850 PF00281 Ribosomal protein L5 BA894_01850 PF00673 ribosomal L5P family C-terminus BA894_01855 PF00253 Ribosomal protein S14p/S29e BA894_01860 PF00410 Ribosomal protein S8 BA894_01865 PF00347 Ribosomal protein L6 BA894_01870 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BA894_01875 PF00333 Ribosomal protein S5, N-terminal domain BA894_01875 PF03719 Ribosomal protein S5, C-terminal domain BA894_01880 PF00327 Ribosomal protein L30p/L7e BA894_01890 PF00344 SecY translocase BA894_01895 PF00444 Ribosomal protein L36 BA894_01900 PF00416 Ribosomal protein S13/S18 BA894_01905 PF00411 Ribosomal protein S11 BA894_01910 PF01479 S4 domain BA894_01910 PF00163 Ribosomal protein S4/S9 N-terminal domain BA894_01915 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BA894_01915 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BA894_01915 PF01000 RNA polymerase Rpb3/RpoA insert domain BA894_01920 PF01196 Ribosomal protein L17 BA894_01930 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BA894_01930 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BA894_01940 PF13673 Acetyltransferase (GNAT) domain BA894_01945 PF00271 Helicase conserved C-terminal domain BA894_01945 PF00270 DEAD/DEAH box helicase BA894_01945 PF03880 DbpA RNA binding domain BA894_01955 PF02872 5'-nucleotidase, C-terminal domain BA894_01955 PF00149 Calcineurin-like phosphoesterase BA894_01960 PF14824 Sirohaem biosynthesis protein central BA894_01960 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BA894_01960 PF10414 Sirohaem synthase dimerisation region BA894_01965 PF01507 Phosphoadenosine phosphosulfate reductase family BA894_01970 PF00009 Elongation factor Tu GTP binding domain BA894_01975 PF02080 TrkA-C domain BA894_01975 PF03600 Citrate transporter BA894_02000 PF00005 ABC transporter BA894_02010 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) BA894_02015 PF06526 Protein of unknown function (DUF1107) BA894_02020 PF01625 Peptide methionine sulfoxide reductase BA894_02025 PF07244 Surface antigen variable number repeat BA894_02025 PF01103 Surface antigen BA894_02025 PF17243 POTRA domain TamA domain 1 BA894_02030 PF04357 TamB, inner membrane protein subunit of TAM complex BA894_02035 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like BA894_02040 PF00719 Inorganic pyrophosphatase BA894_02045 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain BA894_02050 PF01225 Mur ligase family, catalytic domain BA894_02050 PF02875 Mur ligase family, glutamate ligase domain BA894_02050 PF08245 Mur ligase middle domain BA894_02055 PF02441 Flavoprotein BA894_02065 PF00528 Binding-protein-dependent transport system inner membrane component BA894_02070 PF00005 ABC transporter BA894_02075 PF00582 Universal stress protein family BA894_02090 PF02863 Arginine repressor, C-terminal domain BA894_02090 PF01316 Arginine repressor, DNA binding domain BA894_02095 PF00056 lactate/malate dehydrogenase, NAD binding domain BA894_02095 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BA894_02105 PF00348 Polyprenyl synthetase BA894_02110 PF00829 Ribosomal prokaryotic L21 protein BA894_02115 PF01016 Ribosomal L27 protein BA894_02120 PF01926 50S ribosome-binding GTPase BA894_02120 PF01018 GTP1/OBG BA894_02125 PF06738 Putative threonine/serine exporter BA894_02130 PF12821 Threonine/Serine exporter, ThrE BA894_02135 PF00186 Dihydrofolate reductase BA894_02140 PF00149 Calcineurin-like phosphoesterase BA894_02145 PF04379 ApaG domain BA894_02150 PF00398 Ribosomal RNA adenine dimethylase BA894_02155 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BA894_02160 PF09312 SurA N-terminal domain BA894_02165 PF04453 LPS transport system D BA894_02165 PF03968 OstA-like protein BA894_02170 PF05099 Tellurite resistance protein TerB BA894_02170 PF00226 DnaJ domain BA894_02180 PF00694 Aconitase C-terminal domain BA894_02185 PF00330 Aconitase family (aconitate hydratase) BA894_02190 PF00180 Isocitrate/isopropylmalate dehydrogenase BA894_02195 PF08502 LeuA allosteric (dimerisation) domain BA894_02195 PF00682 HMGL-like BA894_02205 PF01569 PAP2 superfamily BA894_02215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_02215 PF03466 LysR substrate binding domain BA894_02220 PF00501 AMP-binding enzyme BA894_02225 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BA894_02225 PF00205 Thiamine pyrophosphate enzyme, central domain BA894_02225 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BA894_02230 PF10369 Small subunit of acetolactate synthase BA894_02235 PF00224 Pyruvate kinase, barrel domain BA894_02235 PF02887 Pyruvate kinase, alpha/beta domain BA894_02240 PF08220 DeoR-like helix-turn-helix domain BA894_02240 PF00455 DeoR C terminal sensor domain BA894_02245 PF01380 SIS domain BA894_02250 PF01418 Helix-turn-helix domain, rpiR family BA894_02250 PF01380 SIS domain BA894_02255 PF02378 Phosphotransferase system, EIIC BA894_02255 PF00367 phosphotransferase system, EIIB BA894_02260 PF13580 SIS domain BA894_02265 PF05068 Mannitol repressor BA894_02270 PF01232 Mannitol dehydrogenase Rossmann domain BA894_02270 PF08125 Mannitol dehydrogenase C-terminal domain BA894_02275 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BA894_02275 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BA894_02275 PF02378 Phosphotransferase system, EIIC BA894_02285 PF01979 Amidohydrolase family BA894_02310 PF03180 NLPA lipoprotein BA894_02315 PF00669 Bacterial flagellin N-terminal helical region BA894_02315 PF00700 Bacterial flagellin C-terminal helical region BA894_02315 PF07196 Flagellin hook IN motif BA894_02330 PF03979 Sigma-70 factor, region 1.1 BA894_02330 PF04546 Sigma-70, non-essential region BA894_02330 PF04542 Sigma-70 region 2 BA894_02330 PF04539 Sigma-70 region 3 BA894_02330 PF00140 Sigma-70 factor, region 1.2 BA894_02330 PF04545 Sigma-70, region 4 BA894_02335 PF08278 DNA primase DnaG DnaB-binding BA894_02335 PF10410 DnaB-helicase binding domain of primase BA894_02335 PF01807 CHC2 zinc finger BA894_02335 PF08275 DNA primase catalytic core, N-terminal domain BA894_02340 PF09424 Yqey-like protein BA894_02345 PF01165 Ribosomal protein S21 BA894_02350 PF00814 Glycoprotease family BA894_02355 PF00561 alpha/beta hydrolase fold BA894_02360 PF02660 Glycerol-3-phosphate acyltransferase BA894_02365 PF02152 Dihydroneopterin aldolase BA894_02370 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BA894_02375 PF02673 Bacitracin resistance protein BacA BA894_02380 PF01743 Poly A polymerase head domain BA894_02380 PF12627 Probable RNA and SrmB- binding site of polymerase A BA894_02380 PF01966 HD domain BA894_02385 PF13401 AAA domain BA894_02385 PF01471 Putative peptidoglycan binding domain BA894_02395 PF08239 Bacterial SH3 domain BA894_02400 PF01384 Phosphate transporter family BA894_02405 PF01865 Protein of unknown function DUF47 BA894_02410 PF01928 CYTH domain BA894_02420 PF02743 Cache domain BA894_02420 PF00672 HAMP domain BA894_02420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA894_02425 PF08335 GlnD PII-uridylyltransferase BA894_02425 PF03710 Glutamate-ammonia ligase adenylyltransferase BA894_02430 PF01467 Cytidylyltransferase-like BA894_02430 PF00294 pfkB family carbohydrate kinase BA894_02435 PF02321 Outer membrane efflux protein BA894_02440 PF00293 NUDIX domain BA894_02445 PF06853 Protein of unknown function (DUF1249) BA894_02450 PF00149 Calcineurin-like phosphoesterase BA894_02455 PF05728 Uncharacterised protein family (UPF0227) BA894_02460 PF00204 DNA gyrase B BA894_02460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA894_02460 PF00986 DNA gyrase B subunit, carboxyl terminus BA894_02460 PF01751 Toprim domain BA894_02465 PF03989 DNA gyrase C-terminal domain, beta-propeller BA894_02465 PF00521 DNA gyrase/topoisomerase IV, subunit A BA894_02470 PF13180 PDZ domain BA894_02475 PF00595 PDZ domain BA894_02480 PF06295 Protein of unknown function (DUF1043) BA894_02485 PF03969 AFG1-like ATPase BA894_02490 PF00572 Ribosomal protein L13 BA894_02495 PF00380 Ribosomal protein S9/S16 BA894_02500 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal BA894_02500 PF00355 Rieske [2Fe-2S] domain BA894_02505 PF00033 Cytochrome b/b6/petB BA894_02505 PF00032 Cytochrome b(C-terminal)/b6/petD BA894_02510 PF02167 Cytochrome C1 family BA894_02515 PF02798 Glutathione S-transferase, N-terminal domain BA894_02515 PF00043 Glutathione S-transferase, C-terminal domain BA894_02520 PF04386 Stringent starvation protein B BA894_02525 PF04972 BON domain BA894_02530 PF13580 SIS domain BA894_02535 PF02021 Uncharacterised protein family UPF0102 BA894_02540 PF04348 LppC putative lipoprotein BA894_02545 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BA894_02555 PF01795 MraW methylase family BA894_02560 PF04999 Cell division protein FtsL BA894_02565 PF00905 Penicillin binding protein transpeptidase domain BA894_02565 PF03717 Penicillin-binding Protein dimerisation domain BA894_02570 PF01225 Mur ligase family, catalytic domain BA894_02570 PF08245 Mur ligase middle domain BA894_02570 PF02875 Mur ligase family, glutamate ligase domain BA894_02575 PF08245 Mur ligase middle domain BA894_02575 PF02875 Mur ligase family, glutamate ligase domain BA894_02575 PF01225 Mur ligase family, catalytic domain BA894_02580 PF00953 Glycosyl transferase family 4 BA894_02580 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 BA894_02585 PF02875 Mur ligase family, glutamate ligase domain BA894_02585 PF08245 Mur ligase middle domain BA894_02590 PF01098 Cell cycle protein BA894_02595 PF03033 Glycosyltransferase family 28 N-terminal domain BA894_02595 PF04101 Glycosyltransferase family 28 C-terminal domain BA894_02600 PF01225 Mur ligase family, catalytic domain BA894_02600 PF08245 Mur ligase middle domain BA894_02600 PF02875 Mur ligase family, glutamate ligase domain BA894_02605 PF03799 Cell division protein FtsQ BA894_02605 PF08478 POTRA domain, FtsQ-type BA894_02610 PF02491 SHS2 domain inserted in FTSA BA894_02615 PF12327 FtsZ family, C-terminal domain BA894_02615 PF00091 Tubulin/FtsZ family, GTPase domain BA894_02620 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase BA894_02630 PF02810 SEC-C motif BA894_02630 PF07517 SecA DEAD-like domain BA894_02630 PF07516 SecA Wing and Scaffold domain BA894_02630 PF01043 SecA preprotein cross-linking domain BA894_02635 PF00293 NUDIX domain BA894_02640 PF05173 Dihydrodipicolinate reductase, C-terminus BA894_02640 PF01113 Dihydrodipicolinate reductase, N-terminus BA894_02645 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BA894_02645 PF00117 Glutamine amidotransferase class-I BA894_02650 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BA894_02650 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BA894_02650 PF02142 MGS-like domain BA894_02655 PF01925 Sulfite exporter TauE/SafE BA894_02660 PF03466 LysR substrate binding domain BA894_02660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_02665 PF03458 UPF0126 domain BA894_02670 PF01497 Periplasmic binding protein BA894_02675 PF03186 CobD/Cbib protein BA894_02680 PF01048 Phosphorylase superfamily BA894_02690 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA894_02690 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BA894_02695 PF00310 Glutamine amidotransferases class-II BA894_02695 PF04898 Glutamate synthase central domain BA894_02695 PF01645 Conserved region in glutamate synthase BA894_02695 PF01493 GXGXG motif BA894_02700 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA894_02700 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BA894_02705 PF04898 Glutamate synthase central domain BA894_02705 PF00310 Glutamine amidotransferases class-II BA894_02705 PF01645 Conserved region in glutamate synthase BA894_02705 PF01493 GXGXG motif BA894_02710 PF16199 Radical_SAM C-terminal domain BA894_02710 PF04055 Radical SAM superfamily BA894_02715 PF00072 Response regulator receiver domain BA894_02715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA894_02715 PF01627 Hpt domain BA894_02715 PF00512 His Kinase A (phospho-acceptor) domain BA894_02715 PF18415 Histidine kinase receptor ArcB trans-membrane domain BA894_02715 PF00989 PAS fold BA894_02725 PF00486 Transcriptional regulatory protein, C terminal BA894_02725 PF00072 Response regulator receiver domain BA894_02735 PF03737 Aldolase/RraA BA894_02745 PF03447 Homoserine dehydrogenase, NAD binding domain BA894_02745 PF00696 Amino acid kinase family BA894_02745 PF13840 ACT domain BA894_02745 PF01842 ACT domain BA894_02745 PF00742 Homoserine dehydrogenase BA894_02750 PF00288 GHMP kinases N terminal domain BA894_02750 PF08544 GHMP kinases C terminal BA894_02755 PF14821 Threonine synthase N terminus BA894_02755 PF00291 Pyridoxal-phosphate dependent enzyme BA894_02760 PF01228 Glycine radical BA894_02765 PF01261 Xylose isomerase-like TIM barrel BA894_02770 PF03167 Uracil DNA glycosylase superfamily BA894_02785 PF01235 Sodium:alanine symporter family BA894_02790 PF03883 Peroxide stress protein YaaA BA894_02795 PF00270 DEAD/DEAH box helicase BA894_02795 PF00271 Helicase conserved C-terminal domain BA894_02800 PF05175 Methyltransferase small domain BA894_02805 PF05525 Branched-chain amino acid transport protein BA894_02810 PF00258 Flavodoxin BA894_02815 PF02899 Phage integrase, N-terminal SAM-like domain BA894_02815 PF00589 Phage integrase family BA894_02820 PF13098 Thioredoxin-like domain BA894_02820 PF10411 Disulfide bond isomerase protein N-terminus BA894_02825 PF17768 RecJ OB domain BA894_02825 PF02272 DHHA1 domain BA894_02825 PF01368 DHH family BA894_02830 PF03462 PCRF domain BA894_02830 PF00472 RF-1 domain BA894_02835 PF00152 tRNA synthetases class II (D, K and N) BA894_02835 PF01336 OB-fold nucleic acid binding domain BA894_02840 PF00158 Sigma-54 interaction domain BA894_02840 PF00989 PAS fold BA894_02840 PF02954 Bacterial regulatory protein, Fis family BA894_02850 PF00248 Aldo/keto reductase family BA894_02860 PF02976 DNA mismatch repair enzyme MutH BA894_02865 PF00293 NUDIX domain BA894_02870 PF01590 GAF domain BA894_02870 PF02896 PEP-utilising enzyme, TIM barrel domain BA894_02870 PF05524 PEP-utilising enzyme, N-terminal BA894_02870 PF00391 PEP-utilising enzyme, mobile domain BA894_02875 PF01925 Sulfite exporter TauE/SafE BA894_02880 PF01790 Prolipoprotein diacylglyceryl transferase BA894_02885 PF00303 Thymidylate synthase BA894_02895 PF02690 Na+/Pi-cotransporter BA894_02900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_02900 PF03466 LysR substrate binding domain BA894_02905 PF01022 Bacterial regulatory protein, arsR family BA894_02910 PF01649 Ribosomal protein S20 BA894_02915 PF03023 Lipid II flippase MurJ BA894_02920 PF06574 FAD synthetase BA894_02920 PF01687 Riboflavin kinase BA894_02925 PF08264 Anticodon-binding domain of tRNA BA894_02925 PF00133 tRNA synthetases class I (I, L, M and V) BA894_02925 PF06827 Zinc finger found in FPG and IleRS BA894_02930 PF01252 Signal peptidase (SPase) II BA894_02935 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BA894_02940 PF02401 LytB protein BA894_02945 PF04397 LytTr DNA-binding domain BA894_02945 PF00072 Response regulator receiver domain BA894_02950 PF07694 5TMR of 5TMR-LYT BA894_02950 PF06580 Histidine kinase BA894_02955 PF02554 Carbon starvation protein CstA BA894_02970 PF01380 SIS domain BA894_02975 PF03702 Anhydro-N-acetylmuramic acid kinase BA894_02980 PF00933 Glycosyl hydrolase family 3 N terminal domain BA894_02985 PF00793 DAHP synthetase I family BA894_02990 PF01817 Chorismate mutase type II BA894_02990 PF02153 Prephenate dehydrogenase BA894_02995 PF04225 Opacity-associated protein A LysM-like domain BA894_02995 PF01551 Peptidase family M23 BA894_03000 PF00005 ABC transporter BA894_03000 PF12848 ABC transporter BA894_03005 PF01464 Transglycosylase SLT domain BA894_03005 PF14718 Soluble lytic murein transglycosylase L domain BA894_03010 PF01371 Trp repressor protein BA894_03015 PF01931 Protein of unknown function DUF84 BA894_03020 PF00800 Prephenate dehydratase BA894_03020 PF01817 Chorismate mutase type II BA894_03025 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BA894_03030 PF00497 Bacterial extracellular solute-binding proteins, family 3 BA894_03030 PF01464 Transglycosylase SLT domain BA894_03035 PF13525 Outer membrane lipoprotein BA894_03040 PF01479 S4 domain BA894_03040 PF00849 RNA pseudouridylate synthase BA894_03050 PF10431 C-terminal, D2-small domain, of ClpB protein BA894_03050 PF02861 Clp amino terminal domain, pathogenicity island component BA894_03050 PF17871 AAA lid domain BA894_03050 PF07724 AAA domain (Cdc48 subfamily) BA894_03050 PF00004 ATPase family associated with various cellular activities (AAA) BA894_03065 PF00005 ABC transporter BA894_03075 PF01979 Amidohydrolase family BA894_03120 PF03411 Penicillin-insensitive murein endopeptidase BA894_03130 PF00037 4Fe-4S binding domain BA894_03140 PF04381 Putative exonuclease, RdgC BA894_03150 PF00072 Response regulator receiver domain BA894_03150 PF00486 Transcriptional regulatory protein, C terminal BA894_03155 PF00989 PAS fold BA894_03155 PF00512 His Kinase A (phospho-acceptor) domain BA894_03155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA894_03155 PF11808 Phosphate regulon sensor protein PhoR BA894_03160 PF12849 PBP superfamily domain BA894_03165 PF02541 Ppx/GppA phosphatase family BA894_03170 PF13089 Polyphosphate kinase N-terminal domain BA894_03170 PF17941 Polyphosphate kinase C-terminal domain 1 BA894_03170 PF13090 Polyphosphate kinase C-terminal domain 2 BA894_03170 PF02503 Polyphosphate kinase middle domain BA894_03175 PF00528 Binding-protein-dependent transport system inner membrane component BA894_03180 PF00528 Binding-protein-dependent transport system inner membrane component BA894_03185 PF00005 ABC transporter BA894_03190 PF01895 PhoU domain BA894_03195 PF03976 Polyphosphate kinase 2 (PPK2) BA894_03200 PF03932 CutC family BA894_03205 PF10417 C-terminal domain of 1-Cys peroxiredoxin BA894_03205 PF00578 AhpC/TSA family BA894_03210 PF03466 LysR substrate binding domain BA894_03210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_03215 PF01274 Malate synthase BA894_03220 PF00463 Isocitrate lyase family BA894_03225 PF00571 CBS domain BA894_03235 PF02547 Queuosine biosynthesis protein BA894_03240 PF01702 Queuine tRNA-ribosyltransferase BA894_03245 PF02699 Preprotein translocase subunit BA894_03250 PF13721 SecD export protein N-terminal TM region BA894_03250 PF07549 SecD/SecF GG Motif BA894_03250 PF02355 Protein export membrane protein BA894_03255 PF02355 Protein export membrane protein BA894_03255 PF07549 SecD/SecF GG Motif BA894_03260 PF00459 Inositol monophosphatase family BA894_03265 PF00588 SpoU rRNA Methylase family BA894_03270 PF02082 Transcriptional regulator BA894_03275 PF00266 Aminotransferase class-V BA894_03280 PF01592 NifU-like N terminal domain BA894_03285 PF01521 Iron-sulphur cluster biosynthesis BA894_03290 PF07743 HSCB C-terminal oligomerisation domain BA894_03290 PF00226 DnaJ domain BA894_03295 PF00012 Hsp70 protein BA894_03300 PF00111 2Fe-2S iron-sulfur cluster binding domain BA894_03305 PF04384 Iron-sulphur cluster assembly BA894_03310 PF00883 Cytosol aminopeptidase family, catalytic domain BA894_03310 PF12404 Peptidase BA894_03315 PF00334 Nucleoside diphosphate kinase BA894_03320 PF04055 Radical SAM superfamily BA894_03325 PF13464 Domain of unknown function (DUF4115) BA894_03330 PF04551 GcpE protein BA894_03335 PF13393 Histidyl-tRNA synthetase BA894_03335 PF03129 Anticodon binding domain BA894_03340 PF09976 Tetratricopeptide repeat-like domain BA894_03345 PF13360 PQQ-like domain BA894_03350 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BA894_03350 PF01926 50S ribosome-binding GTPase BA894_03365 PF13742 OB-fold nucleic acid binding domain BA894_03365 PF02601 Exonuclease VII, large subunit BA894_03370 PF00478 IMP dehydrogenase / GMP reductase domain BA894_03370 PF00571 CBS domain BA894_03375 PF00958 GMP synthase C terminal domain BA894_03375 PF00117 Glutamine amidotransferase class-I BA894_03375 PF02540 NAD synthase BA894_03380 PF03553 Na+/H+ antiporter family BA894_03385 PF01184 GPR1/FUN34/yaaH family BA894_03395 PF07690 Major Facilitator Superfamily BA894_03400 PF01546 Peptidase family M20/M25/M40 BA894_03400 PF07687 Peptidase dimerisation domain BA894_03405 PF03466 LysR substrate binding domain BA894_03405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_03410 PF01235 Sodium:alanine symporter family BA894_03415 PF01266 FAD dependent oxidoreductase BA894_03425 PF01053 Cys/Met metabolism PLP-dependent enzyme BA894_03430 PF00202 Aminotransferase class-III BA894_03450 PF00583 Acetyltransferase (GNAT) family BA894_03450 PF00795 Carbon-nitrogen hydrolase BA894_03455 PF03466 LysR substrate binding domain BA894_03455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_03460 PF00596 Class II Aldolase and Adducin N-terminal domain BA894_03465 PF06134 L-rhamnose isomerase (RhaA) BA894_03470 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BA894_03475 PF05336 L-rhamnose mutarotase BA894_03485 PF02311 AraC-like ligand binding domain BA894_03485 PF12833 Helix-turn-helix domain BA894_03505 PF05384 Sensor protein DegS BA894_03505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA894_03505 PF07730 Histidine kinase BA894_03510 PF00196 Bacterial regulatory proteins, luxR family BA894_03510 PF00072 Response regulator receiver domain BA894_03520 PF01668 SmpB protein BA894_03525 PF03364 Polyketide cyclase / dehydrase and lipid transport BA894_03530 PF03658 RnfH family Ubiquitin BA894_03535 PF04355 SmpA / OmlA family BA894_03540 PF02463 RecF/RecN/SMC N terminal domain BA894_03545 PF01513 ATP-NAD kinase BA894_03550 PF01025 GrpE BA894_03555 PF00375 Sodium:dicarboxylate symporter family BA894_03560 PF00012 Hsp70 protein BA894_03565 PF00684 DnaJ central domain BA894_03565 PF00226 DnaJ domain BA894_03565 PF01556 DnaJ C terminal domain BA894_03570 PF07963 Prokaryotic N-terminal methylation motif BA894_03570 PF00114 Pilin (bacterial filament) BA894_03600 PF14437 MafB19-like deaminase BA894_03605 PF00497 Bacterial extracellular solute-binding proteins, family 3 BA894_03605 PF01464 Transglycosylase SLT domain BA894_03610 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BA894_03610 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal BA894_03610 PF02769 AIR synthase related protein, C-terminal domain BA894_03635 PF07687 Peptidase dimerisation domain BA894_03635 PF01546 Peptidase family M20/M25/M40 BA894_03640 PF00860 Permease family BA894_03645 PF00156 Phosphoribosyl transferase domain BA894_03655 PF07417 Sigma factor-binding transcriptional regulator Crl BA894_03660 PF01472 PUA domain BA894_03660 PF00696 Amino acid kinase family BA894_03665 PF00171 Aldehyde dehydrogenase family BA894_03670 PF03477 ATP cone domain BA894_03675 PF01872 RibD C-terminal domain BA894_03675 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BA894_03680 PF00677 Lumazine binding domain BA894_03685 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BA894_03685 PF00925 GTP cyclohydrolase II BA894_03690 PF00885 6,7-dimethyl-8-ribityllumazine synthase BA894_03695 PF01029 NusB family BA894_03700 PF00586 AIR synthase related protein, N-terminal domain BA894_03700 PF02769 AIR synthase related protein, C-terminal domain BA894_03705 PF04608 Phosphatidylglycerophosphatase A BA894_03710 PF02780 Transketolase, C-terminal domain BA894_03710 PF02779 Transketolase, pyrimidine binding domain BA894_03710 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BA894_03715 PF00348 Polyprenyl synthetase BA894_03720 PF02609 Exonuclease VII small subunit BA894_03725 PF01618 MotA/TolQ/ExbB proton channel family BA894_03730 PF00691 OmpA family BA894_03735 PF02568 Thiamine biosynthesis protein (ThiI) BA894_03735 PF02926 THUMP domain BA894_03740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_03740 PF03466 LysR substrate binding domain BA894_03750 PF04241 Protein of unknown function (DUF423) BA894_03755 PF01728 FtsJ-like methyltransferase BA894_03755 PF18125 RlmM ferredoxin-like domain BA894_03760 PF01367 5'-3' exonuclease, C-terminal SAM fold BA894_03760 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BA894_03765 PF03641 Possible lysine decarboxylase BA894_03765 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases BA894_03765 PF11892 Domain of unknown function (DUF3412) BA894_03770 PF00990 Diguanylate cyclase, GGDEF domain BA894_03780 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term BA894_03780 PF14489 QueF-like protein BA894_03785 PF07348 Syd protein (SUKH-2) BA894_03790 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) BA894_03795 PF03180 NLPA lipoprotein BA894_03800 PF00528 Binding-protein-dependent transport system inner membrane component BA894_03805 PF00005 ABC transporter BA894_03805 PF09383 NIL domain BA894_03815 PF00356 Bacterial regulatory proteins, lacI family BA894_03820 PF02378 Phosphotransferase system, EIIC BA894_03820 PF00367 phosphotransferase system, EIIB BA894_03825 PF16657 Maltogenic Amylase, C-terminal domain BA894_03825 PF00128 Alpha amylase, catalytic domain BA894_03835 PF00464 Serine hydroxymethyltransferase BA894_03840 PF04055 Radical SAM superfamily BA894_03840 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BA894_03845 PF03099 Biotin/lipoate A/B protein ligase family BA894_03850 PF04359 Protein of unknown function (DUF493) BA894_03855 PF00768 D-alanyl-D-alanine carboxypeptidase BA894_03855 PF07943 Penicillin-binding protein 5, C-terminal domain BA894_03860 PF05036 Sporulation related domain BA894_03860 PF03330 Lytic transglycolase BA894_03865 PF01098 Cell cycle protein BA894_03870 PF03717 Penicillin-binding Protein dimerisation domain BA894_03870 PF00905 Penicillin binding protein transpeptidase domain BA894_03875 PF02590 Predicted SPOUT methyltransferase BA894_03885 PF06144 DNA polymerase III, delta subunit BA894_03885 PF14840 Processivity clamp loader gamma complex DNA pol III C-term BA894_03890 PF04390 Lipopolysaccharide-assembly BA894_03895 PF13603 Leucyl-tRNA synthetase, Domain 2 BA894_03895 PF08264 Anticodon-binding domain of tRNA BA894_03895 PF00133 tRNA synthetases class I (I, L, M and V) BA894_03900 PF07295 Zinc-ribbon containing domain BA894_03905 PF00795 Carbon-nitrogen hydrolase BA894_03910 PF03471 Transporter associated domain BA894_03910 PF00571 CBS domain BA894_03915 PF02130 Uncharacterized protein family UPF0054 BA894_03920 PF02562 PhoH-like protein BA894_03925 PF04055 Radical SAM superfamily BA894_03925 PF00919 Uncharacterized protein family UPF0004 BA894_03925 PF01938 TRAM domain BA894_03930 PF01494 FAD binding domain BA894_04040 PF06071 Protein of unknown function (DUF933) BA894_04040 PF01926 50S ribosome-binding GTPase BA894_04045 PF01195 Peptidyl-tRNA hydrolase BA894_04050 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BA894_04050 PF14572 Phosphoribosyl synthetase-associated domain BA894_04055 PF00288 GHMP kinases N terminal domain BA894_04055 PF08544 GHMP kinases C terminal BA894_04060 PF03550 Outer membrane lipoprotein LolB BA894_04065 PF01488 Shikimate / quinate 5-dehydrogenase BA894_04065 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BA894_04065 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BA894_04070 PF03462 PCRF domain BA894_04070 PF00472 RF-1 domain BA894_04075 PF17827 PrmC N-terminal domain BA894_04075 PF13847 Methyltransferase domain BA894_04080 PF04247 Invasion gene expression up-regulator, SirB BA894_04085 PF13369 Transglutaminase-like superfamily BA894_04090 PF00793 DAHP synthetase I family BA894_04095 PF00149 Calcineurin-like phosphoesterase BA894_04095 PF02872 5'-nucleotidase, C-terminal domain BA894_04100 PF04073 Aminoacyl-tRNA editing domain BA894_04105 PF01479 S4 domain BA894_04105 PF00849 RNA pseudouridylate synthase BA894_04110 PF01713 Smr domain BA894_04140 PF13276 HTH-like domain BA894_04140 PF00665 Integrase core domain BA894_04140 PF13333 Integrase core domain BA894_04150 PF00403 Heavy-metal-associated domain BA894_04155 PF00749 tRNA synthetases class I (E and Q), catalytic domain BA894_04160 PF01389 OmpA-like transmembrane domain BA894_04160 PF00691 OmpA family BA894_04205 PF01584 CheW-like domain BA894_04205 PF00072 Response regulator receiver domain BA894_04210 PF03705 CheR methyltransferase, all-alpha domain BA894_04210 PF01739 CheR methyltransferase, SAM binding domain BA894_04215 PF00460 Flagella basal body rod protein BA894_04220 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BA894_04220 PF00460 Flagella basal body rod protein BA894_04225 PF03963 Flagellar hook capping protein - N-terminal region BA894_04225 PF13860 FlgD Ig-like domain BA894_04225 PF13861 FlgD Tudor-like domain BA894_04230 PF07559 Flagellar basal body protein FlaE BA894_04230 PF00460 Flagella basal body rod protein BA894_04230 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BA894_04235 PF00460 Flagella basal body rod protein BA894_04235 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BA894_04240 PF00460 Flagella basal body rod protein BA894_04240 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BA894_04245 PF02107 Flagellar L-ring protein BA894_04250 PF02119 Flagellar P-ring protein BA894_04255 PF10135 Rod binding protein BA894_04255 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BA894_04260 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BA894_04260 PF07196 Flagellin hook IN motif BA894_04265 PF00669 Bacterial flagellin N-terminal helical region BA894_04270 PF07196 Flagellin hook IN motif BA894_04270 PF00669 Bacterial flagellin N-terminal helical region BA894_04270 PF00700 Bacterial flagellin C-terminal helical region BA894_04275 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BA894_04280 PF05524 PEP-utilising enzyme, N-terminal BA894_04280 PF02896 PEP-utilising enzyme, TIM barrel domain BA894_04280 PF00391 PEP-utilising enzyme, mobile domain BA894_04285 PF00381 PTS HPr component phosphorylation site BA894_04290 PF00291 Pyridoxal-phosphate dependent enzyme BA894_04300 PF04354 ZipA, C-terminal FtsZ-binding domain BA894_04310 PF03120 NAD-dependent DNA ligase OB-fold domain BA894_04310 PF00533 BRCA1 C Terminus (BRCT) domain BA894_04310 PF01653 NAD-dependent DNA ligase adenylation domain BA894_04365 PF00294 pfkB family carbohydrate kinase BA894_04370 PF01156 Inosine-uridine preferring nucleoside hydrolase BA894_04375 PF00962 Adenosine/AMP deaminase BA894_04405 PF03573 outer membrane porin, OprD family BA894_04420 PF01145 SPFH domain / Band 7 family BA894_04420 PF16200 C-terminal region of band_7 BA894_04425 PF00085 Thioredoxin BA894_04430 PF00106 short chain dehydrogenase BA894_04435 PF01370 NAD dependent epimerase/dehydratase family BA894_04435 PF08338 Domain of unknown function (DUF1731) BA894_04440 PF07556 Protein of unknown function (DUF1538) BA894_04445 PF07556 Protein of unknown function (DUF1538) BA894_04465 PF12850 Calcineurin-like phosphoesterase superfamily domain BA894_04480 PF17323 Trans-membrane regulatory protein ToxS BA894_04485 PF00486 Transcriptional regulatory protein, C terminal BA894_04490 PF00183 Hsp90 protein BA894_04490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA894_04495 PF05191 Adenylate kinase, active site lid BA894_04500 PF00762 Ferrochelatase BA894_04505 PF00854 POT family BA894_04510 PF02357 Transcription termination factor nusG BA894_04515 PF13537 Glutamine amidotransferase domain BA894_04515 PF00733 Asparagine synthase BA894_04520 PF00999 Sodium/hydrogen exchanger family BA894_04520 PF02254 TrkA-N domain BA894_04525 PF00480 ROK family BA894_04525 PF01047 MarR family BA894_04530 PF01979 Amidohydrolase family BA894_04535 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BA894_04535 PF00367 phosphotransferase system, EIIB BA894_04535 PF02378 Phosphotransferase system, EIIC BA894_04540 PF00749 tRNA synthetases class I (E and Q), catalytic domain BA894_04540 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain BA894_04550 PF00665 Integrase core domain BA894_04550 PF13276 HTH-like domain BA894_04550 PF13333 Integrase core domain BA894_04555 PF01475 Ferric uptake regulator family BA894_04560 PF01118 Semialdehyde dehydrogenase, NAD binding domain BA894_04560 PF02774 Semialdehyde dehydrogenase, dimerisation domain BA894_04565 PF00258 Flavodoxin BA894_04575 PF12697 Alpha/beta hydrolase family BA894_04585 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BA894_04585 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BA894_04585 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BA894_04585 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BA894_04595 PF01784 NIF3 (NGG1p interacting factor 3) BA894_04605 PF13333 Integrase core domain BA894_04605 PF00665 Integrase core domain BA894_04605 PF13276 HTH-like domain BA894_04610 PF00285 Citrate synthase, C-terminal domain BA894_04615 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BA894_04620 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BA894_04625 PF02910 Fumarate reductase flavoprotein C-term BA894_04625 PF00890 FAD binding domain BA894_04630 PF13085 2Fe-2S iron-sulfur cluster binding domain BA894_04635 PF02779 Transketolase, pyrimidine binding domain BA894_04635 PF16870 2-oxoglutarate dehydrogenase C-terminal BA894_04635 PF00676 Dehydrogenase E1 component BA894_04635 PF16078 2-oxoglutarate dehydrogenase N-terminus BA894_04640 PF02817 e3 binding domain BA894_04640 PF00364 Biotin-requiring enzyme BA894_04640 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BA894_04645 PF00549 CoA-ligase BA894_04645 PF08442 ATP-grasp domain BA894_04650 PF02629 CoA binding domain BA894_04650 PF00549 CoA-ligase BA894_04655 PF00950 ABC 3 transport family BA894_04660 PF00005 ABC transporter BA894_04665 PF01297 Zinc-uptake complex component A periplasmic BA894_04670 PF02311 AraC-like ligand binding domain BA894_04670 PF12833 Helix-turn-helix domain BA894_04675 PF04023 FeoA domain BA894_04680 PF07664 Ferrous iron transport protein B C terminus BA894_04680 PF17910 FeoB cytosolic helical domain BA894_04680 PF02421 Ferrous iron transport protein B BA894_04680 PF07670 Nucleoside recognition BA894_04695 PF03485 Arginyl tRNA synthetase N terminal domain BA894_04695 PF00750 tRNA synthetases class I (R) BA894_04695 PF05746 DALR anticodon binding domain BA894_04700 PF06185 YecM protein BA894_04710 PF00089 Trypsin BA894_04715 PF01842 ACT domain BA894_04715 PF00551 Formyl transferase BA894_04720 PF04851 Type III restriction enzyme, res subunit BA894_04720 PF13307 Helicase C-terminal domain BA894_04725 PF00814 Glycoprotease family BA894_04740 PF00561 alpha/beta hydrolase fold BA894_04745 PF00501 AMP-binding enzyme BA894_04745 PF13193 AMP-binding enzyme C-terminal domain BA894_04750 PF00570 HRDC domain BA894_04750 PF01612 3'-5' exonuclease BA894_04755 PF03776 Septum formation topological specificity factor MinE BA894_04760 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BA894_04765 PF05209 Septum formation inhibitor MinC, N-terminal domain BA894_04765 PF03775 Septum formation inhibitor MinC, C-terminal domain BA894_04770 PF05166 YcgL domain BA894_04775 PF13406 Transglycosylase SLT domain BA894_04780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_04780 PF03466 LysR substrate binding domain BA894_04785 PF07670 Nucleoside recognition BA894_04785 PF07662 Na+ dependent nucleoside transporter C-terminus BA894_04785 PF01773 Na+ dependent nucleoside transporter N-terminus BA894_04790 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BA894_04790 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BA894_04800 PF02384 N-6 DNA Methylase BA894_04835 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) BA894_04835 PF18766 SWI2/SNF2 ATPase BA894_04835 PF12008 Type I restriction and modification enzyme - subunit R C terminal BA894_04895 PF01527 Transposase BA894_04900 PF00665 Integrase core domain BA894_04900 PF13333 Integrase core domain BA894_04900 PF13276 HTH-like domain BA894_04910 PF00665 Integrase core domain BA894_04910 PF13333 Integrase core domain BA894_04910 PF13276 HTH-like domain BA894_04930 PF00425 chorismate binding enzyme BA894_04935 PF00501 AMP-binding enzyme BA894_04935 PF13193 AMP-binding enzyme C-terminal domain BA894_04940 PF00550 Phosphopantetheine attachment site BA894_04940 PF00857 Isochorismatase family BA894_04945 PF00501 AMP-binding enzyme BA894_04945 PF00975 Thioesterase domain BA894_04945 PF00975 Thioesterase domain BA894_04945 PF00668 Condensation domain BA894_04945 PF00668 Condensation domain BA894_04945 PF00550 Phosphopantetheine attachment site BA894_04945 PF13193 AMP-binding enzyme C-terminal domain BA894_04945 PF00501 AMP-binding enzyme BA894_04945 PF00550 Phosphopantetheine attachment site BA894_04945 PF13193 AMP-binding enzyme C-terminal domain BA894_04960 PF00593 TonB dependent receptor BA894_04960 PF07715 TonB-dependent Receptor Plug Domain BA894_04965 PF01595 Cyclin M transmembrane N-terminal domain BA894_04965 PF00571 CBS domain BA894_04965 PF03471 Transporter associated domain BA894_04970 PF00271 Helicase conserved C-terminal domain BA894_04970 PF00270 DEAD/DEAH box helicase BA894_04975 PF02254 TrkA-N domain BA894_04975 PF02080 TrkA-C domain BA894_04980 PF02386 Cation transport protein BA894_04990 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BA894_04995 PF00486 Transcriptional regulatory protein, C terminal BA894_04995 PF00072 Response regulator receiver domain BA894_05000 PF00672 HAMP domain BA894_05000 PF00512 His Kinase A (phospho-acceptor) domain BA894_05000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA894_05005 PF01547 Bacterial extracellular solute-binding protein BA894_05015 PF00528 Binding-protein-dependent transport system inner membrane component BA894_05020 PF03459 TOBE domain BA894_05020 PF17912 MalK OB fold domain BA894_05020 PF00005 ABC transporter BA894_05025 PF03480 Bacterial extracellular solute-binding protein, family 7 BA894_05030 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component BA894_05035 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BA894_05045 PF02954 Bacterial regulatory protein, Fis family BA894_05045 PF00072 Response regulator receiver domain BA894_05045 PF00158 Sigma-54 interaction domain BA894_05050 PF00512 His Kinase A (phospho-acceptor) domain BA894_05050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA894_05050 PF02743 Cache domain BA894_05060 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BA894_05060 PF05698 Bacterial trigger factor protein (TF) C-terminus BA894_05060 PF05697 Bacterial trigger factor protein (TF) BA894_05065 PF00574 Clp protease BA894_05070 PF06689 ClpX C4-type zinc finger BA894_05070 PF10431 C-terminal, D2-small domain, of ClpB protein BA894_05070 PF07724 AAA domain (Cdc48 subfamily) BA894_05075 PF02190 ATP-dependent protease La (LON) substrate-binding domain BA894_05075 PF00004 ATPase family associated with various cellular activities (AAA) BA894_05075 PF05362 Lon protease (S16) C-terminal proteolytic domain BA894_05080 PF00216 Bacterial DNA-binding protein BA894_05085 PF13145 PPIC-type PPIASE domain BA894_05105 PF01966 HD domain BA894_05105 PF13286 Phosphohydrolase-associated domain BA894_05195 PF00155 Aminotransferase class I and II BA894_05200 PF00425 chorismate binding enzyme BA894_05205 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BA894_05205 PF16582 Middle domain of thiamine pyrophosphate BA894_05205 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BA894_05210 PF12697 Alpha/beta hydrolase family BA894_05215 PF00378 Enoyl-CoA hydratase/isomerase BA894_05220 PF13378 Enolase C-terminal domain-like BA894_05225 PF00501 AMP-binding enzyme BA894_05225 PF13193 AMP-binding enzyme C-terminal domain BA894_05235 PF03601 Conserved hypothetical protein 698 BA894_05240 PF07690 Major Facilitator Superfamily BA894_05280 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BA894_05280 PF00529 HlyD membrane-fusion protein of T1SS BA894_05285 PF00873 AcrB/AcrD/AcrF family BA894_05295 PF00291 Pyridoxal-phosphate dependent enzyme BA894_05300 PF01037 Lrp/AsnC ligand binding domain BA894_05300 PF13404 AsnC-type helix-turn-helix domain BA894_05310 PF09619 Type III secretion system lipoprotein chaperone (YscW) BA894_05315 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BA894_05330 PF03466 LysR substrate binding domain BA894_05330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_05335 PF00232 Glycosyl hydrolase family 1 BA894_05340 PF01266 FAD dependent oxidoreductase BA894_05345 PF00120 Glutamine synthetase, catalytic domain BA894_05350 PF00120 Glutamine synthetase, catalytic domain BA894_05355 PF00202 Aminotransferase class-III BA894_05360 PF13416 Bacterial extracellular solute-binding protein BA894_05365 PF00005 ABC transporter BA894_05365 PF08402 TOBE domain BA894_05370 PF00528 Binding-protein-dependent transport system inner membrane component BA894_05375 PF00528 Binding-protein-dependent transport system inner membrane component BA894_05385 PF00171 Aldehyde dehydrogenase family BA894_05390 PF00958 GMP synthase C terminal domain BA894_05390 PF00117 Glutamine amidotransferase class-I BA894_05395 PF00588 SpoU rRNA Methylase family BA894_05395 PF08032 RNA 2'-O ribose methyltransferase substrate binding BA894_05400 PF00037 4Fe-4S binding domain BA894_05400 PF11953 Domain of unknown function (DUF3470) BA894_05410 PF00571 CBS domain BA894_05410 PF00478 IMP dehydrogenase / GMP reductase domain BA894_05415 PF00403 Heavy-metal-associated domain BA894_05420 PF01048 Phosphorylase superfamily BA894_05430 PF00672 HAMP domain BA894_05430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA894_05435 PF01230 HIT domain BA894_05450 PF08139 Prokaryotic membrane lipoprotein lipid attachment site BA894_05450 PF13036 Peptidoglycan-synthase activator LpoB BA894_05460 PF05728 Uncharacterised protein family (UPF0227) BA894_05465 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA894_05480 PF03461 TRCF domain BA894_05480 PF17757 UvrB interaction domain BA894_05480 PF02559 CarD-like/TRCF domain BA894_05480 PF00270 DEAD/DEAH box helicase BA894_05480 PF00271 Helicase conserved C-terminal domain BA894_05490 PF12704 MacB-like periplasmic core domain BA894_05490 PF02687 FtsX-like permease family BA894_05495 PF00005 ABC transporter BA894_05500 PF12704 MacB-like periplasmic core domain BA894_05500 PF02687 FtsX-like permease family BA894_05510 PF13567 Domain of unknown function (DUF4131) BA894_05510 PF03772 Competence protein BA894_05510 PF00753 Metallo-beta-lactamase superfamily BA894_05515 PF00664 ABC transporter transmembrane region BA894_05515 PF00005 ABC transporter BA894_05520 PF02606 Tetraacyldisaccharide-1-P 4'-kinase BA894_05525 PF03966 Trm112p-like protein BA894_05530 PF02348 Cytidylyltransferase BA894_05535 PF04293 SpoVR like protein BA894_05540 PF04285 Protein of unknown function (DUF444) BA894_05545 PF08298 PrkA AAA domain BA894_05545 PF06798 PrkA serine protein kinase C-terminal domain BA894_05550 PF03887 YfbU domain BA894_05560 PF04055 Radical SAM superfamily BA894_05570 PF02901 Pyruvate formate lyase-like BA894_05570 PF01228 Glycine radical BA894_05585 PF00005 ABC transporter BA894_05590 PF00497 Bacterial extracellular solute-binding proteins, family 3 BA894_05595 PF00528 Binding-protein-dependent transport system inner membrane component BA894_05600 PF00528 Binding-protein-dependent transport system inner membrane component BA894_05605 PF03372 Endonuclease/Exonuclease/phosphatase family BA894_05615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_05615 PF03466 LysR substrate binding domain BA894_05620 PF03788 LrgA family BA894_05625 PF04172 LrgB-like family BA894_05630 PF10689 Protein of unknown function (DUF2496) BA894_05635 PF07445 Primosomal replication protein priC BA894_05640 PF01925 Sulfite exporter TauE/SafE BA894_05645 PF13307 Helicase C-terminal domain BA894_05645 PF06733 DEAD_2 BA894_05655 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) BA894_05660 PF00849 RNA pseudouridylate synthase BA894_05665 PF03971 Monomeric isocitrate dehydrogenase BA894_05670 PF00313 'Cold-shock' DNA-binding domain BA894_05675 PF02617 ATP-dependent Clp protease adaptor protein ClpS BA894_05680 PF17871 AAA lid domain BA894_05680 PF00004 ATPase family associated with various cellular activities (AAA) BA894_05680 PF02861 Clp amino terminal domain, pathogenicity island component BA894_05680 PF10431 C-terminal, D2-small domain, of ClpB protein BA894_05680 PF07724 AAA domain (Cdc48 subfamily) BA894_05685 PF01176 Translation initiation factor 1A / IF-1 BA894_05690 PF04376 Arginine-tRNA-protein transferase, N terminus BA894_05690 PF04377 Arginine-tRNA-protein transferase, C terminus BA894_05695 PF03588 Leucyl/phenylalanyl-tRNA protein transferase BA894_05705 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BA894_05710 PF10692 Protein of unknown function (DUF2498) BA894_05715 PF08272 Topoisomerase I zinc-ribbon-like BA894_05715 PF01131 DNA topoisomerase BA894_05715 PF01751 Toprim domain BA894_05715 PF01396 Topoisomerase DNA binding C4 zinc finger BA894_05720 PF00483 Nucleotidyl transferase BA894_05725 PF08323 Starch synthase catalytic domain BA894_05725 PF00534 Glycosyl transferases group 1 BA894_05745 PF04994 TfoX C-terminal domain BA894_05745 PF04993 TfoX N-terminal domain BA894_05750 PF00356 Bacterial regulatory proteins, lacI family BA894_05755 PF02613 Nitrate reductase delta subunit BA894_05760 PF00072 Response regulator receiver domain BA894_05760 PF00486 Transcriptional regulatory protein, C terminal BA894_05765 PF02698 DUF218 domain BA894_05775 PF17192 MukF middle domain BA894_05775 PF17193 MukF C-terminal domain BA894_05775 PF03882 MukF winged-helix domain BA894_05780 PF04288 MukE-like family BA894_05785 PF16330 MukB hinge domain BA894_05785 PF04310 MukB N-terminal BA894_05790 PF12833 Helix-turn-helix domain BA894_05790 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term BA894_05795 PF00171 Aldehyde dehydrogenase family BA894_05800 PF00732 GMC oxidoreductase BA894_05800 PF05199 GMC oxidoreductase BA894_05805 PF18030 RimK PreATP-grasp domain BA894_05805 PF08443 RimK-like ATP-grasp domain BA894_05815 PF08443 RimK-like ATP-grasp domain BA894_05815 PF18030 RimK PreATP-grasp domain BA894_05820 PF08003 Protein of unknown function (DUF1698) BA894_05825 PF13649 Methyltransferase domain BA894_05830 PF01904 Protein of unknown function DUF72 BA894_05835 PF00152 tRNA synthetases class II (D, K and N) BA894_05835 PF02938 GAD domain BA894_05835 PF01336 OB-fold nucleic acid binding domain BA894_05840 PF02075 Crossover junction endodeoxyribonuclease RuvC BA894_05845 PF07499 RuvA, C-terminal domain BA894_05845 PF01330 RuvA N terminal domain BA894_05850 PF17864 RuvB AAA lid domain BA894_05850 PF05491 RuvB C-terminal winged helix domain BA894_05850 PF05496 Holliday junction DNA helicase RuvB P-loop domain BA894_05855 PF01654 Cytochrome bd terminal oxidase subunit I BA894_05860 PF02322 Cytochrome bd terminal oxidase subunit II BA894_05865 PF08173 Membrane bound YbgT-like protein BA894_05875 PF03061 Thioesterase superfamily BA894_05880 PF01618 MotA/TolQ/ExbB proton channel family BA894_05885 PF02472 Biopolymer transport protein ExbD/TolR BA894_05895 PF07676 WD40-like Beta Propeller Repeat BA894_05895 PF04052 TolB amino-terminal domain BA894_05900 PF00691 OmpA family BA894_05905 PF16331 TolA binding protein trimerisation BA894_05905 PF13174 Tetratricopeptide repeat BA894_05910 PF02445 Quinolinate synthetase A protein BA894_05920 PF03994 Domain of Unknown Function (DUF350) BA894_05930 PF03738 Glutathionylspermidine synthase preATP-grasp BA894_05940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA894_05940 PF00512 His Kinase A (phospho-acceptor) domain BA894_05940 PF09308 LuxQ, periplasmic BA894_05940 PF00072 Response regulator receiver domain BA894_05945 PF06610 L-alanine exporter BA894_05965 PF02796 Helix-turn-helix domain of resolvase BA894_05965 PF00239 Resolvase, N terminal domain BA894_05980 PF13391 HNH endonuclease BA894_05985 PF00082 Subtilase family BA894_05990 PF03466 LysR substrate binding domain BA894_05990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_05995 PF16957 Malonate decarboxylase, alpha subunit, transporter BA894_06000 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase BA894_06015 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG BA894_06020 PF00698 Acyl transferase domain BA894_06025 PF07883 Cupin domain BA894_06025 PF01381 Helix-turn-helix BA894_06030 PF03594 Benzoate membrane transport protein BA894_06035 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BA894_06035 PF00529 HlyD membrane-fusion protein of T1SS BA894_06040 PF00873 AcrB/AcrD/AcrF family BA894_06055 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) BA894_06065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_06065 PF03466 LysR substrate binding domain BA894_06075 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BA894_06075 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BA894_06080 PF01037 Lrp/AsnC ligand binding domain BA894_06085 PF01580 FtsK/SpoIIIE family BA894_06085 PF09397 Ftsk gamma domain BA894_06085 PF17854 FtsK alpha domain BA894_06085 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BA894_06090 PF03548 Outer membrane lipoprotein carrier protein LolA BA894_06095 PF12002 MgsA AAA+ ATPase C terminal BA894_06095 PF00004 ATPase family associated with various cellular activities (AAA) BA894_06095 PF16193 AAA C-terminal domain BA894_06100 PF02403 Seryl-tRNA synthetase N-terminal domain BA894_06100 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BA894_06105 PF00202 Aminotransferase class-III BA894_06110 PF06968 Biotin and Thiamin Synthesis associated domain BA894_06110 PF04055 Radical SAM superfamily BA894_06115 PF00155 Aminotransferase class I and II BA894_06120 PF08241 Methyltransferase domain BA894_06130 PF01435 Peptidase family M48 BA894_06140 PF00106 short chain dehydrogenase BA894_06175 PF08328 Adenylosuccinate lyase C-terminal BA894_06175 PF00206 Lyase BA894_06180 PF04356 Protein of unknown function (DUF489) BA894_06195 PF00294 pfkB family carbohydrate kinase BA894_06200 PF00816 H-NS histone family BA894_06205 PF03553 Na+/H+ antiporter family BA894_06215 PF00158 Sigma-54 interaction domain BA894_06215 PF02954 Bacterial regulatory protein, Fis family BA894_06215 PF00072 Response regulator receiver domain BA894_06220 PF08029 HisG, C-terminal domain BA894_06220 PF01634 ATP phosphoribosyltransferase BA894_06225 PF00815 Histidinol dehydrogenase BA894_06230 PF00155 Aminotransferase class I and II BA894_06235 PF08645 Polynucleotide kinase 3 phosphatase BA894_06235 PF00475 Imidazoleglycerol-phosphate dehydratase BA894_06240 PF00117 Glutamine amidotransferase class-I BA894_06245 PF00977 Histidine biosynthesis protein BA894_06250 PF00977 Histidine biosynthesis protein BA894_06255 PF01502 Phosphoribosyl-AMP cyclohydrolase BA894_06255 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BA894_06260 PF02810 SEC-C motif BA894_06265 PF00563 EAL domain BA894_06265 PF08668 HDOD domain BA894_06270 PF00149 Calcineurin-like phosphoesterase BA894_06275 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BA894_06280 PF09190 DALR domain BA894_06280 PF01406 tRNA synthetases class I (C) catalytic domain BA894_06285 PF00265 Thymidine kinase BA894_06290 PF02698 DUF218 domain BA894_06305 PF01226 Formate/nitrite transporter BA894_06310 PF03649 Uncharacterised protein family (UPF0014) BA894_06315 PF06796 Periplasmic nitrate reductase protein NapE BA894_06320 PF03264 NapC/NirT cytochrome c family, N-terminal region BA894_06325 PF01568 Molydopterin dinucleotide binding domain BA894_06325 PF18364 Molybdopterin oxidoreductase N-terminal domain BA894_06325 PF00384 Molybdopterin oxidoreductase BA894_06330 PF16875 Glycosyl hydrolase family 36 N-terminal domain BA894_06330 PF16874 Glycosyl hydrolase family 36 C-terminal domain BA894_06340 PF02833 DHHA2 domain BA894_06340 PF01368 DHH family BA894_06350 PF00005 ABC transporter BA894_06355 PF00005 ABC transporter BA894_06355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA894_06360 PF12911 N-terminal TM domain of oligopeptide transport permease C BA894_06360 PF00528 Binding-protein-dependent transport system inner membrane component BA894_06365 PF00528 Binding-protein-dependent transport system inner membrane component BA894_06370 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA894_06375 PF02954 Bacterial regulatory protein, Fis family BA894_06375 PF00158 Sigma-54 interaction domain BA894_06380 PF04012 PspA/IM30 family BA894_06385 PF06667 Phage shock protein B BA894_06390 PF04024 PspC domain BA894_06395 PF13533 Biotin-lipoyl like BA894_06400 PF13533 Biotin-lipoyl like BA894_06405 PF00873 AcrB/AcrD/AcrF family BA894_06410 PF03352 Methyladenine glycosylase BA894_06415 PF01053 Cys/Met metabolism PLP-dependent enzyme BA894_06420 PF13091 PLD-like domain BA894_06420 PF13396 Phospholipase_D-nuclease N-terminal BA894_06425 PF00209 Sodium:neurotransmitter symporter family BA894_06430 PF00849 RNA pseudouridylate synthase BA894_06440 PF00970 Oxidoreductase FAD-binding domain BA894_06440 PF00111 2Fe-2S iron-sulfur cluster binding domain BA894_06440 PF00175 Oxidoreductase NAD-binding domain BA894_06445 PF03063 Prismane/CO dehydrogenase family BA894_06450 PF00158 Sigma-54 interaction domain BA894_06450 PF01590 GAF domain BA894_06460 PF01066 CDP-alcohol phosphatidyltransferase BA894_06465 PF00005 ABC transporter BA894_06470 PF00528 Binding-protein-dependent transport system inner membrane component BA894_06475 PF13416 Bacterial extracellular solute-binding protein BA894_06485 PF06945 Protein of unknown function (DUF1289) BA894_06495 PF02872 5'-nucleotidase, C-terminal domain BA894_06495 PF00149 Calcineurin-like phosphoesterase BA894_06500 PF01386 Ribosomal L25p family BA894_06505 PF00512 His Kinase A (phospho-acceptor) domain BA894_06505 PF00672 HAMP domain BA894_06505 PF13756 Stimulus-sensing domain BA894_06505 PF13755 Sensor N-terminal transmembrane domain BA894_06505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA894_06510 PF00486 Transcriptional regulatory protein, C terminal BA894_06510 PF00072 Response regulator receiver domain BA894_06520 PF00271 Helicase conserved C-terminal domain BA894_06520 PF04851 Type III restriction enzyme, res subunit BA894_06525 PF01479 S4 domain BA894_06525 PF00849 RNA pseudouridylate synthase BA894_06530 PF07690 Major Facilitator Superfamily BA894_06540 PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB BA894_06545 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) BA894_06560 PF03264 NapC/NirT cytochrome c family, N-terminal region BA894_06565 PF11066 Protein of unknown function (DUF2867) BA894_06565 PF13460 NAD(P)H-binding BA894_06570 PF01554 MatE BA894_06575 PF00005 ABC transporter BA894_06590 PF06965 Na+/H+ antiporter 1 BA894_06595 PF16295 Tetracyclin repressor-like, C-terminal domain BA894_06595 PF00440 Bacterial regulatory proteins, tetR family BA894_06600 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BA894_06600 PF09317 Domain of unknown function (DUF1974) BA894_06600 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BA894_06600 PF02770 Acyl-CoA dehydrogenase, middle domain BA894_06605 PF12241 Trans-2-enoyl-CoA reductase catalytic region BA894_06605 PF07055 Enoyl reductase FAD binding domain BA894_06605 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase BA894_06610 PF02080 TrkA-C domain BA894_06610 PF06826 Predicted Permease Membrane Region BA894_06615 PF00462 Glutaredoxin BA894_06620 PF00171 Aldehyde dehydrogenase family BA894_06620 PF00465 Iron-containing alcohol dehydrogenase BA894_06625 PF01418 Helix-turn-helix domain, rpiR family BA894_06625 PF01380 SIS domain BA894_06630 PF00282 Pyridoxal-dependent decarboxylase conserved domain BA894_06640 PF03956 Lysine exporter LysO BA894_06650 PF04994 TfoX C-terminal domain BA894_06650 PF04993 TfoX N-terminal domain BA894_06665 PF00512 His Kinase A (phospho-acceptor) domain BA894_06665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA894_06665 PF00497 Bacterial extracellular solute-binding proteins, family 3 BA894_06675 PF00266 Aminotransferase class-V BA894_06680 PF00291 Pyridoxal-phosphate dependent enzyme BA894_06685 PF00005 ABC transporter BA894_06685 PF00664 ABC transporter transmembrane region BA894_06690 PF00664 ABC transporter transmembrane region BA894_06690 PF00005 ABC transporter BA894_06695 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA894_06705 PF00266 Aminotransferase class-V BA894_06715 PF00939 Sodium:sulfate symporter transmembrane region BA894_06720 PF02698 DUF218 domain BA894_06725 PF03949 Malic enzyme, NAD binding domain BA894_06725 PF00390 Malic enzyme, N-terminal domain BA894_06730 PF04408 Helicase associated domain (HA2) BA894_06730 PF00270 DEAD/DEAH box helicase BA894_06730 PF00271 Helicase conserved C-terminal domain BA894_06730 PF08482 ATP-dependent helicase C-terminal BA894_06740 PF09423 PhoD-like phosphatase BA894_06740 PF16655 PhoD-like phosphatase, N-terminal domain BA894_06745 PF01259 SAICAR synthetase BA894_06765 PF00691 OmpA family BA894_06780 PF02913 FAD linked oxidases, C-terminal domain BA894_06780 PF01565 FAD binding domain BA894_06780 PF13183 4Fe-4S dicluster domain BA894_06790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_06790 PF03466 LysR substrate binding domain BA894_06795 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BA894_06800 PF13409 Glutathione S-transferase, N-terminal domain BA894_06810 PF00491 Arginase family BA894_06815 PF01979 Amidohydrolase family BA894_06820 PF00392 Bacterial regulatory proteins, gntR family BA894_06820 PF07702 UTRA domain BA894_06835 PF03129 Anticodon binding domain BA894_06835 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BA894_06835 PF02824 TGS domain BA894_06835 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BA894_06840 PF00707 Translation initiation factor IF-3, C-terminal domain BA894_06840 PF05198 Translation initiation factor IF-3, N-terminal domain BA894_06845 PF01632 Ribosomal protein L35 BA894_06850 PF00453 Ribosomal protein L20 BA894_06860 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BA894_06860 PF01409 tRNA synthetases class II core domain (F) BA894_06865 PF03484 tRNA synthetase B5 domain BA894_06865 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BA894_06865 PF01588 Putative tRNA binding domain BA894_06865 PF03147 Ferredoxin-fold anticodon binding domain BA894_06865 PF03483 B3/4 domain BA894_06870 PF00251 Glycosyl hydrolases family 32 N-terminal domain BA894_06870 PF08244 Glycosyl hydrolases family 32 C terminal BA894_06875 PF00294 pfkB family carbohydrate kinase BA894_06885 PF00356 Bacterial regulatory proteins, lacI family BA894_06885 PF13407 Periplasmic binding protein domain BA894_06895 PF00216 Bacterial DNA-binding protein BA894_06905 PF05724 Thiopurine S-methyltransferase (TPMT) BA894_06910 PF02222 ATP-grasp domain BA894_06915 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BA894_06915 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region BA894_06920 PF04172 LrgB-like family BA894_06925 PF03788 LrgA family BA894_06930 PF00929 Exonuclease BA894_06930 PF08411 Exonuclease C-terminal BA894_06945 PF08003 Protein of unknown function (DUF1698) BA894_06965 PF13460 NAD(P)H-binding BA894_06970 PF01613 Flavin reductase like domain BA894_06975 PF02277 Phosphoribosyltransferase BA894_06980 PF02654 Cobalamin-5-phosphate synthase BA894_06985 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase BA894_07000 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family BA894_07005 PF01032 FecCD transport family BA894_07010 PF00005 ABC transporter BA894_07030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_07030 PF03466 LysR substrate binding domain BA894_07040 PF01863 Protein of unknown function DUF45 BA894_07045 PF05971 RNA methyltransferase BA894_07105 PF00005 ABC transporter BA894_07110 PF01032 FecCD transport family BA894_07125 PF07687 Peptidase dimerisation domain BA894_07125 PF01546 Peptidase family M20/M25/M40 BA894_07130 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BA894_07135 PF04209 homogentisate 1,2-dioxygenase BA894_07145 PF14497 Glutathione S-transferase, C-terminal domain BA894_07145 PF02798 Glutathione S-transferase, N-terminal domain BA894_07170 PF00474 Sodium:solute symporter family BA894_07175 PF06196 Protein of unknown function (DUF997) BA894_07185 PF12833 Helix-turn-helix domain BA894_07190 PF01810 LysE type translocator BA894_07195 PF05036 Sporulation related domain BA894_07195 PF03330 Lytic transglycolase BA894_07200 PF07969 Amidohydrolase family BA894_07205 PF08220 DeoR-like helix-turn-helix domain BA894_07205 PF00455 DeoR C terminal sensor domain BA894_07215 PF13181 Tetratricopeptide repeat BA894_07215 PF07719 Tetratricopeptide repeat BA894_07225 PF06039 Malate:quinone oxidoreductase (Mqo) BA894_07235 PF17862 AAA+ lid domain BA894_07235 PF01434 Peptidase family M41 BA894_07235 PF00004 ATPase family associated with various cellular activities (AAA) BA894_07340 PF01177 Asp/Glu/Hydantoin racemase BA894_07350 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin BA894_07355 PF01425 Amidase BA894_07365 PF00266 Aminotransferase class-V BA894_07370 PF07687 Peptidase dimerisation domain BA894_07370 PF01546 Peptidase family M20/M25/M40 BA894_07380 PF02417 Chromate transporter BA894_07385 PF02417 Chromate transporter BA894_07390 PF01494 FAD binding domain BA894_07395 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BA894_07400 PF12697 Alpha/beta hydrolase family BA894_07405 PF01557 Fumarylacetoacetate (FAA) hydrolase family BA894_07410 PF01118 Semialdehyde dehydrogenase, NAD binding domain BA894_07410 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation BA894_07415 PF07836 DmpG-like communication domain BA894_07415 PF00682 HMGL-like BA894_07420 PF00083 Sugar (and other) transporter BA894_07425 PF09339 IclR helix-turn-helix domain BA894_07425 PF01614 Bacterial transcriptional regulator BA894_07430 PF02230 Phospholipase/Carboxylesterase BA894_07435 PF00486 Transcriptional regulatory protein, C terminal BA894_07435 PF00072 Response regulator receiver domain BA894_07440 PF01627 Hpt domain BA894_07440 PF18415 Histidine kinase receptor ArcB trans-membrane domain BA894_07440 PF00072 Response regulator receiver domain BA894_07440 PF00512 His Kinase A (phospho-acceptor) domain BA894_07440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA894_07440 PF00989 PAS fold BA894_07450 PF02653 Branched-chain amino acid transport system / permease component BA894_07460 PF12399 Branched-chain amino acid ATP-binding cassette transporter BA894_07460 PF00005 ABC transporter BA894_07465 PF00005 ABC transporter BA894_07470 PF01774 UreD urease accessory protein BA894_07475 PF00547 Urease, gamma subunit BA894_07480 PF00699 Urease beta subunit BA894_07485 PF00449 Urease alpha-subunit, N-terminal domain BA894_07485 PF01979 Amidohydrolase family BA894_07490 PF02814 UreE urease accessory protein, N-terminal domain BA894_07490 PF05194 UreE urease accessory protein, C-terminal domain BA894_07495 PF01730 UreF BA894_07500 PF02492 CobW/HypB/UreG, nucleotide-binding domain BA894_07510 PF00939 Sodium:sulfate symporter transmembrane region BA894_07515 PF00497 Bacterial extracellular solute-binding proteins, family 3 BA894_07515 PF00512 His Kinase A (phospho-acceptor) domain BA894_07515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA894_07535 PF03222 Tryptophan/tyrosine permease family BA894_07540 PF00072 Response regulator receiver domain BA894_07540 PF01966 HD domain BA894_07560 PF00664 ABC transporter transmembrane region BA894_07560 PF00005 ABC transporter BA894_07575 PF00012 Hsp70 protein BA894_07580 PF00012 Hsp70 protein BA894_07615 PF02525 Flavodoxin-like fold BA894_07620 PF11898 Domain of unknown function (DUF3418) BA894_07620 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold BA894_07620 PF00270 DEAD/DEAH box helicase BA894_07620 PF04408 Helicase associated domain (HA2) BA894_07620 PF00271 Helicase conserved C-terminal domain BA894_07635 PF02028 BCCT, betaine/carnitine/choline family transporter BA894_07645 PF14743 DNA ligase OB-like domain BA894_07645 PF01068 ATP dependent DNA ligase domain BA894_07655 PF01554 MatE BA894_07660 PF00677 Lumazine binding domain BA894_07675 PF00486 Transcriptional regulatory protein, C terminal BA894_07675 PF00072 Response regulator receiver domain BA894_07680 PF00990 Diguanylate cyclase, GGDEF domain BA894_07680 PF05230 MASE2 domain BA894_07690 PF00877 NlpC/P60 family BA894_07695 PF12729 Four helix bundle sensory module for signal transduction BA894_07695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA894_07695 PF00672 HAMP domain BA894_07715 PF00480 ROK family BA894_07730 PF03453 MoeA N-terminal region (domain I and II) BA894_07730 PF00994 Probable molybdopterin binding domain BA894_07730 PF03454 MoeA C-terminal region (domain IV) BA894_07735 PF12804 MobA-like NTP transferase domain BA894_07740 PF00005 ABC transporter BA894_07740 PF08402 TOBE domain BA894_07745 PF00528 Binding-protein-dependent transport system inner membrane component BA894_07750 PF12849 PBP superfamily domain BA894_07755 PF02954 Bacterial regulatory protein, Fis family BA894_07755 PF00158 Sigma-54 interaction domain BA894_07755 PF00072 Response regulator receiver domain BA894_07760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA894_07760 PF00512 His Kinase A (phospho-acceptor) domain BA894_07765 PF00005 ABC transporter BA894_07765 PF12848 ABC transporter BA894_07770 PF02634 FdhD/NarQ family BA894_07800 PF00384 Molybdopterin oxidoreductase BA894_07800 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BA894_07800 PF01568 Molydopterin dinucleotide binding domain BA894_07805 PF13247 4Fe-4S dicluster domain BA894_07820 PF12464 Maltose acetyltransferase BA894_07820 PF00132 Bacterial transferase hexapeptide (six repeats) BA894_07825 PF12833 Helix-turn-helix domain BA894_07830 PF01554 MatE BA894_07835 PF00909 Ammonium Transporter Family BA894_07840 PF02146 Sir2 family BA894_07845 PF13416 Bacterial extracellular solute-binding protein BA894_07850 PF13416 Bacterial extracellular solute-binding protein BA894_07855 PF00528 Binding-protein-dependent transport system inner membrane component BA894_07860 PF00528 Binding-protein-dependent transport system inner membrane component BA894_07865 PF08402 TOBE domain BA894_07865 PF00005 ABC transporter BA894_07880 PF01171 PP-loop family BA894_07885 PF00582 Universal stress protein family BA894_07890 PF13545 Crp-like helix-turn-helix domain BA894_07890 PF00027 Cyclic nucleotide-binding domain BA894_07905 PF00403 Heavy-metal-associated domain BA894_07915 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BA894_07915 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP BA894_07930 PF00115 Cytochrome C and Quinol oxidase polypeptide I BA894_07945 PF09308 LuxQ, periplasmic BA894_07945 PF00512 His Kinase A (phospho-acceptor) domain BA894_07945 PF00072 Response regulator receiver domain BA894_07945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA894_07970 PF08000 Bacterial PH domain BA894_08000 PF06303 MatP N-terminal domain BA894_08000 PF17414 MatP C-terminal ribbon-helix-helix domain BA894_08005 PF05362 Lon protease (S16) C-terminal proteolytic domain BA894_08005 PF13654 AAA domain BA894_08010 PF07977 FabA-like domain BA894_08015 PF04957 Ribosome modulation factor BA894_08035 PF01170 Putative RNA methylase family UPF0020 BA894_08035 PF02926 THUMP domain BA894_08035 PF10672 S-adenosylmethionine-dependent methyltransferase BA894_08040 PF07126 Cell-division protein ZapC BA894_08045 PF01180 Dihydroorotate dehydrogenase BA894_08050 PF05088 Bacterial NAD-glutamate dehydrogenase BA894_08055 PF17432 Domain of unknown function (DUF3458_C) ARM repeats BA894_08055 PF01433 Peptidase family M1 domain BA894_08055 PF11940 Domain of unknown function (DUF3458) Ig-like fold BA894_08065 PF11818 C-terminal domain of tail specific protease (DUF3340) BA894_08065 PF00595 PDZ domain BA894_08065 PF17804 Tail specific protease N-terminal domain BA894_08065 PF03572 Peptidase family S41 BA894_08070 PF17516 ProQ C-terminal domain BA894_08070 PF04352 ProQ/FINO family BA894_08075 PF13185 GAF domain BA894_08080 PF00664 ABC transporter transmembrane region BA894_08080 PF00005 ABC transporter BA894_08085 PF04403 Paraquat-inducible protein A BA894_08090 PF02470 MlaD protein BA894_08095 PF01189 16S rRNA methyltransferase RsmB/F BA894_08095 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF BA894_08095 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF BA894_08115 PF00793 DAHP synthetase I family BA894_08120 PF04461 Protein of unknown function (DUF520) BA894_08125 PF10414 Sirohaem synthase dimerisation region BA894_08125 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BA894_08125 PF14824 Sirohaem biosynthesis protein central BA894_08135 PF00497 Bacterial extracellular solute-binding proteins, family 3 BA894_08140 PF00528 Binding-protein-dependent transport system inner membrane component BA894_08145 PF00528 Binding-protein-dependent transport system inner membrane component BA894_08150 PF00005 ABC transporter BA894_08155 PF01027 Inhibitor of apoptosis-promoting Bax1 BA894_08165 PF04358 DsrC like protein BA894_08170 PF00708 Acylphosphatase BA894_08175 PF17785 PUA-like domain BA894_08175 PF10672 S-adenosylmethionine-dependent methyltransferase BA894_08190 PF00691 OmpA family BA894_08200 PF17158 Membrane-associated sensor, integral membrane domain BA894_08200 PF00990 Diguanylate cyclase, GGDEF domain BA894_08205 PF06508 Queuosine biosynthesis protein QueC BA894_08210 PF04055 Radical SAM superfamily BA894_08225 PF14602 Hexapeptide repeat of succinyl-transferase BA894_08225 PF12464 Maltose acetyltransferase BA894_08250 PF00563 EAL domain BA894_08250 PF03707 Bacterial signalling protein N terminal repeat BA894_08250 PF00990 Diguanylate cyclase, GGDEF domain BA894_08255 PF07687 Peptidase dimerisation domain BA894_08255 PF01546 Peptidase family M20/M25/M40 BA894_08265 PF00593 TonB dependent receptor BA894_08265 PF07715 TonB-dependent Receptor Plug Domain BA894_08270 PF00293 NUDIX domain BA894_08280 PF00501 AMP-binding enzyme BA894_08280 PF13193 AMP-binding enzyme C-terminal domain BA894_08280 PF16177 Acetyl-coenzyme A synthetase N-terminus BA894_08285 PF04303 PrpF protein BA894_08290 PF00330 Aconitase family (aconitate hydratase) BA894_08290 PF00694 Aconitase C-terminal domain BA894_08295 PF00285 Citrate synthase, C-terminal domain BA894_08320 PF01970 Tripartite tricarboxylate transporter TctA family BA894_08325 PF01925 Sulfite exporter TauE/SafE BA894_08330 PF16868 NMT1-like family BA894_08335 PF00171 Aldehyde dehydrogenase family BA894_08340 PF01590 GAF domain BA894_08340 PF00158 Sigma-54 interaction domain BA894_08340 PF02954 Bacterial regulatory protein, Fis family BA894_08350 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BA894_08350 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BA894_08355 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BA894_08360 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BA894_08360 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BA894_08365 PF12833 Helix-turn-helix domain BA894_08370 PF07715 TonB-dependent Receptor Plug Domain BA894_08370 PF00593 TonB dependent receptor BA894_08375 PF00072 Response regulator receiver domain BA894_08375 PF12431 Transcriptional regulator BA894_08380 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BA894_08380 PF17203 Single cache domain 3 BA894_08380 PF00989 PAS fold BA894_08380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA894_08395 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BA894_08410 PF13840 ACT domain BA894_08410 PF00696 Amino acid kinase family BA894_08415 PF06339 Ectoine synthase BA894_08420 PF00202 Aminotransferase class-III BA894_08425 PF00583 Acetyltransferase (GNAT) family BA894_08430 PF00571 CBS domain BA894_08430 PF00005 ABC transporter BA894_08435 PF00528 Binding-protein-dependent transport system inner membrane component BA894_08440 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BA894_08450 PF00501 AMP-binding enzyme BA894_08460 PF00106 short chain dehydrogenase BA894_08470 PF00072 Response regulator receiver domain BA894_08470 PF00486 Transcriptional regulatory protein, C terminal BA894_08475 PF00512 His Kinase A (phospho-acceptor) domain BA894_08475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA894_08475 PF08521 Two-component sensor kinase N-terminal BA894_08480 PF00884 Sulfatase BA894_08495 PF00082 Subtilase family BA894_08495 PF05922 Peptidase inhibitor I9 BA894_08500 PF03466 LysR substrate binding domain BA894_08500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_08505 PF00881 Nitroreductase family BA894_08515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_08515 PF03466 LysR substrate binding domain BA894_08520 PF01235 Sodium:alanine symporter family BA894_08535 PF00296 Luciferase-like monooxygenase BA894_08540 PF01810 LysE type translocator BA894_08545 PF02074 Carboxypeptidase Taq (M32) metallopeptidase BA894_08550 PF08546 Ketopantoate reductase PanE/ApbA C terminal BA894_08550 PF02558 Ketopantoate reductase PanE/ApbA BA894_08555 PF04632 Fusaric acid resistance protein family BA894_08560 PF13533 Biotin-lipoyl like BA894_08570 PF03279 Bacterial lipid A biosynthesis acyltransferase BA894_08580 PF04204 Homoserine O-succinyltransferase BA894_08590 PF01627 Hpt domain BA894_08590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA894_08590 PF00512 His Kinase A (phospho-acceptor) domain BA894_08590 PF00672 HAMP domain BA894_08590 PF00072 Response regulator receiver domain BA894_08590 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BA894_08615 PF04237 YjbR BA894_08620 PF01047 MarR family BA894_08625 PF00892 EamA-like transporter family BA894_08630 PF00202 Aminotransferase class-III BA894_08635 PF00171 Aldehyde dehydrogenase family BA894_08640 PF04371 Porphyromonas-type peptidyl-arginine deiminase BA894_08645 PF00795 Carbon-nitrogen hydrolase BA894_08650 PF01266 FAD dependent oxidoreductase BA894_08655 PF00171 Aldehyde dehydrogenase family BA894_08660 PF01381 Helix-turn-helix BA894_08660 PF07883 Cupin domain BA894_08665 PF07722 Peptidase C26 BA894_08670 PF00120 Glutamine synthetase, catalytic domain BA894_08675 PF03553 Na+/H+ antiporter family BA894_08690 PF07969 Amidohydrolase family BA894_08705 PF03831 PhnA domain BA894_08705 PF08274 PhnA Zinc-Ribbon BA894_08710 PF01411 tRNA synthetases class II (A) BA894_08710 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BA894_08740 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BA894_08770 PF01177 Asp/Glu/Hydantoin racemase BA894_08775 PF01965 DJ-1/PfpI family BA894_08785 PF00440 Bacterial regulatory proteins, tetR family BA894_08785 PF17754 MftR C-terminal domain BA894_08790 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) BA894_08815 PF00171 Aldehyde dehydrogenase family BA894_08820 PF00936 BMC domain BA894_08825 PF00936 BMC domain BA894_08835 PF13375 RnfC Barrel sandwich hybrid domain BA894_08835 PF13237 4Fe-4S dicluster domain BA894_08835 PF10531 SLBB domain BA894_08835 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BA894_08840 PF00871 Acetokinase family BA894_08845 PF03928 Haem-degrading BA894_08850 PF03319 Ethanolamine utilisation protein EutN/carboxysome BA894_08865 PF06130 Phosphate propanoyltransferase BA894_08870 PF00465 Iron-containing alcohol dehydrogenase BA894_08875 PF00230 Major intrinsic protein BA894_08880 PF00936 BMC domain BA894_08890 PF12833 Helix-turn-helix domain BA894_08895 PF06580 Histidine kinase BA894_08895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA894_08895 PF00672 HAMP domain BA894_08895 PF02743 Cache domain BA894_08905 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain BA894_08905 PF00728 Glycosyl hydrolase family 20, catalytic domain BA894_08905 PF03173 Putative carbohydrate binding domain BA894_08905 PF02838 Glycosyl hydrolase family 20, domain 2 BA894_08910 PF00486 Transcriptional regulatory protein, C terminal BA894_08910 PF00072 Response regulator receiver domain BA894_08915 PF00672 HAMP domain BA894_08915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA894_08915 PF00512 His Kinase A (phospho-acceptor) domain BA894_08930 PF00171 Aldehyde dehydrogenase family BA894_08940 PF00465 Iron-containing alcohol dehydrogenase BA894_08950 PF02142 MGS-like domain BA894_08955 PF04962 KduI/IolB family BA894_08965 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BA894_08965 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BA894_08970 PF00083 Sugar (and other) transporter BA894_08975 PF01261 Xylose isomerase-like TIM barrel BA894_08980 PF00356 Bacterial regulatory proteins, lacI family BA894_08985 PF01261 Xylose isomerase-like TIM barrel BA894_08990 PF00294 pfkB family carbohydrate kinase BA894_08995 PF00465 Iron-containing alcohol dehydrogenase BA894_08995 PF00171 Aldehyde dehydrogenase family BA894_09000 PF00205 Thiamine pyrophosphate enzyme, central domain BA894_09000 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BA894_09000 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BA894_09005 PF00294 pfkB family carbohydrate kinase BA894_09020 PF04399 Glutaredoxin 2, C terminal domain BA894_09020 PF13417 Glutathione S-transferase, N-terminal domain BA894_09035 PF01261 Xylose isomerase-like TIM barrel BA894_09040 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BA894_09040 PF00356 Bacterial regulatory proteins, lacI family BA894_09045 PF00083 Sugar (and other) transporter BA894_09050 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BA894_09050 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BA894_09055 PF01261 Xylose isomerase-like TIM barrel BA894_09070 PF01740 STAS domain BA894_09075 PF01389 OmpA-like transmembrane domain BA894_09075 PF00691 OmpA family BA894_09095 PF01627 Hpt domain BA894_09095 PF00672 HAMP domain BA894_09095 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BA894_09095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA894_09095 PF00512 His Kinase A (phospho-acceptor) domain BA894_09095 PF00072 Response regulator receiver domain BA894_09100 PF00158 Sigma-54 interaction domain BA894_09100 PF00072 Response regulator receiver domain BA894_09100 PF02954 Bacterial regulatory protein, Fis family BA894_09140 PF13614 AAA domain BA894_09140 PF13807 G-rich domain on putative tyrosine kinase BA894_09140 PF02706 Chain length determinant protein BA894_09145 PF00534 Glycosyl transferases group 1 BA894_09145 PF13439 Glycosyltransferase Family 4 BA894_09155 PF02397 Bacterial sugar transferase BA894_09160 PF01527 Transposase BA894_09170 PF04463 Protein of unknown function (DUF523) BA894_09175 PF02540 NAD synthase BA894_09175 PF00795 Carbon-nitrogen hydrolase BA894_09185 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain BA894_09185 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain BA894_09185 PF02278 Polysaccharide lyase family 8, super-sandwich domain BA894_09205 PF02371 Transposase IS116/IS110/IS902 family BA894_09205 PF01548 Transposase BA894_09215 PF00665 Integrase core domain BA894_09220 PF01527 Transposase BA894_09240 PF05840 Bacteriophage replication gene A protein (GPA) BA894_09260 PF00589 Phage integrase family BA894_09265 PF01810 LysE type translocator BA894_09285 PF00589 Phage integrase family BA894_09285 PF13495 Phage integrase, N-terminal SAM-like domain BA894_09300 PF13302 Acetyltransferase (GNAT) domain BA894_09305 PF18024 Helix-turn-helix domain BA894_09305 PF00158 Sigma-54 interaction domain BA894_09310 PF05128 Domain of unknown function (DUF697) BA894_09315 PF04317 YcjX-like family, DUF463 BA894_09330 PF04715 Anthranilate synthase component I, N terminal region BA894_09330 PF00425 chorismate binding enzyme BA894_09335 PF00293 NUDIX domain BA894_09340 PF03222 Tryptophan/tyrosine permease family BA894_09345 PF03315 Serine dehydratase beta chain BA894_09345 PF03313 Serine dehydratase alpha chain BA894_09350 PF01242 6-pyruvoyl tetrahydropterin synthase BA894_09355 PF01336 OB-fold nucleic acid binding domain BA894_09355 PF00152 tRNA synthetases class II (D, K and N) BA894_09365 PF00155 Aminotransferase class I and II BA894_09365 PF00392 Bacterial regulatory proteins, gntR family BA894_09375 PF00155 Aminotransferase class I and II BA894_09390 PF07733 Bacterial DNA polymerase III alpha NTPase domain BA894_09390 PF00929 Exonuclease BA894_09390 PF02811 PHP domain BA894_09390 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BA894_09390 PF14579 Helix-hairpin-helix motif BA894_09395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA894_09395 PF00672 HAMP domain BA894_09400 PF02028 BCCT, betaine/carnitine/choline family transporter BA894_09405 PF01047 MarR family BA894_09410 PF00072 Response regulator receiver domain BA894_09410 PF00196 Bacterial regulatory proteins, luxR family BA894_09415 PF17200 Single Cache domain 2 BA894_09415 PF07730 Histidine kinase BA894_09420 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BA894_09430 PF03480 Bacterial extracellular solute-binding protein, family 7 BA894_09445 PF00753 Metallo-beta-lactamase superfamily BA894_09450 PF05951 Bacterial protein of unknown function (DUF882) BA894_09455 PF01471 Putative peptidoglycan binding domain BA894_09455 PF03734 L,D-transpeptidase catalytic domain BA894_09480 PF00925 GTP cyclohydrolase II BA894_09485 PF03989 DNA gyrase C-terminal domain, beta-propeller BA894_09485 PF00521 DNA gyrase/topoisomerase IV, subunit A BA894_09495 PF03477 ATP cone domain BA894_09495 PF02867 Ribonucleotide reductase, barrel domain BA894_09495 PF00317 Ribonucleotide reductase, all-alpha domain BA894_09500 PF00268 Ribonucleotide reductase, small chain BA894_09505 PF00970 Oxidoreductase FAD-binding domain BA894_09505 PF00111 2Fe-2S iron-sulfur cluster binding domain BA894_09505 PF00175 Oxidoreductase NAD-binding domain BA894_09510 PF16363 GDP-mannose 4,6 dehydratase BA894_09515 PF12706 Beta-lactamase superfamily domain BA894_09525 PF00994 Probable molybdopterin binding domain BA894_09540 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BA894_09545 PF16653 Saccharopine dehydrogenase C-terminal domain BA894_09545 PF03435 Saccharopine dehydrogenase NADP binding domain BA894_09550 PF00202 Aminotransferase class-III BA894_09575 PF01066 CDP-alcohol phosphatidyltransferase BA894_09580 PF08459 UvrC Helix-hairpin-helix N-terminal BA894_09580 PF02151 UvrB/uvrC motif BA894_09580 PF01541 GIY-YIG catalytic domain BA894_09585 PF00072 Response regulator receiver domain BA894_09585 PF00196 Bacterial regulatory proteins, luxR family BA894_09590 PF00136 DNA polymerase family B BA894_09590 PF03104 DNA polymerase family B, exonuclease domain BA894_09600 PF08207 Elongation factor P (EF-P) KOW-like domain BA894_09600 PF01132 Elongation factor P (EF-P) OB domain BA894_09600 PF09285 Elongation factor P, C-terminal BA894_09605 PF04269 Protein of unknown function, DUF440 BA894_09610 PF01479 S4 domain BA894_09610 PF00849 RNA pseudouridylate synthase BA894_09620 PF01300 Telomere recombination BA894_09625 PF02811 PHP domain BA894_09630 PF08056 Tryptophan operon leader peptide BA894_09635 PF00425 chorismate binding enzyme BA894_09635 PF04715 Anthranilate synthase component I, N terminal region BA894_09640 PF00117 Glutamine amidotransferase class-I BA894_09645 PF00591 Glycosyl transferase family, a/b domain BA894_09645 PF02885 Glycosyl transferase family, helical bundle domain BA894_09650 PF00218 Indole-3-glycerol phosphate synthase BA894_09650 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BA894_09655 PF00291 Pyridoxal-phosphate dependent enzyme BA894_09660 PF00290 Tryptophan synthase alpha chain BA894_09665 PF13545 Crp-like helix-turn-helix domain BA894_09665 PF00027 Cyclic nucleotide-binding domain BA894_09670 PF13193 AMP-binding enzyme C-terminal domain BA894_09670 PF00501 AMP-binding enzyme BA894_09675 PF00375 Sodium:dicarboxylate symporter family BA894_09685 PF00072 Response regulator receiver domain BA894_09685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA894_09695 PF04279 Intracellular septation protein A BA894_09700 PF03061 Thioesterase superfamily BA894_09705 PF03795 YCII-related domain BA894_09715 PF01717 Cobalamin-independent synthase, Catalytic domain BA894_09715 PF08267 Cobalamin-independent synthase, N-terminal domain BA894_09720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_09720 PF03466 LysR substrate binding domain BA894_09735 PF08448 PAS fold BA894_09735 PF08447 PAS fold BA894_09735 PF00990 Diguanylate cyclase, GGDEF domain BA894_09735 PF00563 EAL domain BA894_09740 PF11842 Domain of unknown function (DUF3362) BA894_09740 PF04055 Radical SAM superfamily BA894_09740 PF08497 Radical SAM N-terminal BA894_09745 PF00072 Response regulator receiver domain BA894_09745 PF00486 Transcriptional regulatory protein, C terminal BA894_09750 PF00672 HAMP domain BA894_09750 PF00512 His Kinase A (phospho-acceptor) domain BA894_09750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA894_09765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_09765 PF03466 LysR substrate binding domain BA894_09770 PF00529 HlyD membrane-fusion protein of T1SS BA894_09770 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BA894_09785 PF00085 Thioredoxin BA894_09790 PF02683 Cytochrome C biogenesis protein transmembrane region BA894_09790 PF11412 Disulphide bond corrector protein DsbC BA894_09800 PF18030 RimK PreATP-grasp domain BA894_09800 PF08443 RimK-like ATP-grasp domain BA894_09805 PF00753 Metallo-beta-lactamase superfamily BA894_09805 PF00301 Rubredoxin BA894_09805 PF00258 Flavodoxin BA894_09810 PF00990 Diguanylate cyclase, GGDEF domain BA894_09810 PF00072 Response regulator receiver domain BA894_09815 PF14403 Circularly permuted ATP-grasp type 2 BA894_09830 PF14403 Circularly permuted ATP-grasp type 2 BA894_09830 PF04168 A predicted alpha-helical domain with a conserved ER motif. BA894_09835 PF08379 Bacterial transglutaminase-like N-terminal region BA894_09835 PF01841 Transglutaminase-like superfamily BA894_09840 PF00072 Response regulator receiver domain BA894_09840 PF00196 Bacterial regulatory proteins, luxR family BA894_09845 PF00512 His Kinase A (phospho-acceptor) domain BA894_09845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA894_09850 PF13247 4Fe-4S dicluster domain BA894_09855 PF03916 Polysulphide reductase, NrfD BA894_09860 PF00384 Molybdopterin oxidoreductase BA894_09860 PF01568 Molydopterin dinucleotide binding domain BA894_09860 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BA894_09865 PF00034 Cytochrome c BA894_09870 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BA894_09875 PF04403 Paraquat-inducible protein A BA894_09880 PF02470 MlaD protein BA894_09885 PF03886 ABC-type transport auxiliary lipoprotein component BA894_09890 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase BA894_09900 PF00535 Glycosyl transferase family 2 BA894_09905 PF01370 NAD dependent epimerase/dehydratase family BA894_09915 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA894_09920 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BA894_09925 PF18073 Rubredoxin metal binding domain BA894_09930 PF06305 Lipopolysaccharide assembly protein A domain BA894_09935 PF00216 Bacterial DNA-binding protein BA894_09940 PF00575 S1 RNA binding domain BA894_09945 PF02224 Cytidylate kinase BA894_09950 PF01343 Peptidase family S49 BA894_09950 PF08496 Peptidase family S49 N-terminal BA894_09955 PF00106 short chain dehydrogenase BA894_09970 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BA894_09970 PF07733 Bacterial DNA polymerase III alpha NTPase domain BA894_09970 PF02811 PHP domain BA894_09970 PF01336 OB-fold nucleic acid binding domain BA894_09970 PF14579 Helix-hairpin-helix motif BA894_09975 PF00480 ROK family BA894_09980 PF02887 Pyruvate kinase, alpha/beta domain BA894_09980 PF00224 Pyruvate kinase, barrel domain BA894_09985 PF01734 Patatin-like phospholipase BA894_09995 PF00209 Sodium:neurotransmitter symporter family BA894_10005 PF02378 Phosphotransferase system, EIIC BA894_10005 PF00367 phosphotransferase system, EIIB BA894_10015 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BA894_10015 PF02378 Phosphotransferase system, EIIC BA894_10015 PF00367 phosphotransferase system, EIIB BA894_10020 PF01026 TatD related DNase BA894_10025 PF12169 DNA polymerase III subunits gamma and tau domain III BA894_10030 PF02223 Thymidylate kinase BA894_10035 PF02618 YceG-like family BA894_10040 PF01063 Amino-transferase class IV BA894_10045 PF00109 Beta-ketoacyl synthase, N-terminal domain BA894_10045 PF02801 Beta-ketoacyl synthase, C-terminal domain BA894_10050 PF00550 Phosphopantetheine attachment site BA894_10060 PF00698 Acyl transferase domain BA894_10065 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BA894_10065 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BA894_10070 PF02504 Fatty acid synthesis protein BA894_10075 PF01783 Ribosomal L32p protein family BA894_10080 PF02620 Large ribosomal RNA subunit accumulation protein YceD BA894_10085 PF02545 Maf-like protein BA894_10090 PF00849 RNA pseudouridylate synthase BA894_10090 PF01479 S4 domain BA894_10095 PF12111 Polyribonucleotide phosphorylase C terminal BA894_10095 PF10150 Ribonuclease E/G family BA894_10095 PF00575 S1 RNA binding domain BA894_10100 PF00916 Sulfate permease family BA894_10100 PF01740 STAS domain BA894_10105 PF01451 Low molecular weight phosphotyrosine protein phosphatase BA894_10110 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP BA894_10110 PF12557 Cob(I)alamin adenosyltransferase N terminal BA894_10120 PF00485 Phosphoribulokinase / Uridine kinase family BA894_10125 PF10609 NUBPL iron-transfer P-loop NTPase BA894_10130 PF01588 Putative tRNA binding domain BA894_10130 PF09334 tRNA synthetases class I (M) BA894_10140 PF00392 Bacterial regulatory proteins, gntR family BA894_10140 PF07840 FadR C-terminal domain BA894_10145 PF06450 Bacterial Na+/H+ antiporter B (NhaB) BA894_10150 PF02600 Disulfide bond formation protein DsbB BA894_10155 PF07516 SecA Wing and Scaffold domain BA894_10155 PF07517 SecA DEAD-like domain BA894_10155 PF02810 SEC-C motif BA894_10155 PF01043 SecA preprotein cross-linking domain BA894_10160 PF01207 Dihydrouridine synthase (Dus) BA894_10165 PF00990 Diguanylate cyclase, GGDEF domain BA894_10170 PF00128 Alpha amylase, catalytic domain BA894_10170 PF02903 Alpha amylase, N-terminal ig-like domain BA894_10175 PF00005 ABC transporter BA894_10180 PF02653 Branched-chain amino acid transport system / permease component BA894_10190 PF04217 Protein of unknown function, DUF412 BA894_10195 PF00871 Acetokinase family BA894_10200 PF07085 DRTGG domain BA894_10200 PF01515 Phosphate acetyl/butaryl transferase BA894_10205 PF13194 Domain of unknown function (DUF4010) BA894_10210 PF13409 Glutathione S-transferase, N-terminal domain BA894_10215 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA894_10215 PF00005 ABC transporter BA894_10220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA894_10220 PF00005 ABC transporter BA894_10225 PF12911 N-terminal TM domain of oligopeptide transport permease C BA894_10225 PF00528 Binding-protein-dependent transport system inner membrane component BA894_10230 PF00528 Binding-protein-dependent transport system inner membrane component BA894_10235 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA894_10240 PF02391 MoaE protein BA894_10245 PF02597 ThiS family BA894_10250 PF01967 MoaC family BA894_10255 PF00994 Probable molybdopterin binding domain BA894_10260 PF06463 Molybdenum Cofactor Synthesis C BA894_10260 PF04055 Radical SAM superfamily BA894_10265 PF01933 Uncharacterised protein family UPF0052 BA894_10270 PF01627 Hpt domain BA894_10275 PF00072 Response regulator receiver domain BA894_10275 PF02954 Bacterial regulatory protein, Fis family BA894_10275 PF00158 Sigma-54 interaction domain BA894_10280 PF04851 Type III restriction enzyme, res subunit BA894_10280 PF00271 Helicase conserved C-terminal domain BA894_10280 PF17757 UvrB interaction domain BA894_10280 PF02151 UvrB/uvrC motif BA894_10280 PF12344 Ultra-violet resistance protein B BA894_10335 PF07030 Protein of unknown function (DUF1320) BA894_10340 PF17891 Mu-like prophage FluMu N-terminal domain BA894_10340 PF12949 HeH/LEM domain BA894_10345 PF10124 Mu-like prophage major head subunit gpT BA894_10355 PF10123 Mu-like prophage I protein BA894_10385 PF06074 Protein of unknown function (DUF935) BA894_10390 PF03237 Terminase-like family BA894_10400 PF08461 Ribonuclease R winged-helix domain BA894_10425 PF08765 Mor transcription activator family BA894_10445 PF06252 Protein of unknown function (DUF1018) BA894_10520 PF02508 Rnf-Nqr subunit, membrane protein BA894_10525 PF04060 Putative Fe-S cluster BA894_10530 PF12838 4Fe-4S dicluster domain BA894_10530 PF13375 RnfC Barrel sandwich hybrid domain BA894_10530 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BA894_10530 PF10531 SLBB domain BA894_10535 PF03116 NQR2, RnfD, RnfE family BA894_10540 PF04205 FMN-binding domain BA894_10545 PF02508 Rnf-Nqr subunit, membrane protein BA894_10550 PF00633 Helix-hairpin-helix motif BA894_10550 PF00730 HhH-GPD superfamily base excision DNA repair protein BA894_10550 PF10576 Iron-sulfur binding domain of endonuclease III BA894_10555 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BA894_10560 PF10952 Protein of unknown function (DUF2753) BA894_10565 PF00691 OmpA family BA894_10565 PF18393 MotY N-terminal domain BA894_10570 PF00929 Exonuclease BA894_10575 PF13726 Na+-H+ antiporter family BA894_10575 PF03553 Na+/H+ antiporter family BA894_10585 PF00462 Glutaredoxin BA894_10590 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BA894_10590 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BA894_10605 PF00171 Aldehyde dehydrogenase family BA894_10605 PF00465 Iron-containing alcohol dehydrogenase BA894_10610 PF01914 MarC family integral membrane protein BA894_10615 PF00520 Ion transport protein BA894_10615 PF00027 Cyclic nucleotide-binding domain BA894_10620 PF01118 Semialdehyde dehydrogenase, NAD binding domain BA894_10620 PF02774 Semialdehyde dehydrogenase, dimerisation domain BA894_10625 PF03553 Na+/H+ antiporter family BA894_10670 PF04955 HupE / UreJ protein BA894_10680 PF14490 Helix-hairpin-helix containing domain BA894_10680 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain BA894_10680 PF13538 UvrD-like helicase C-terminal domain BA894_10705 PF04245 37-kD nucleoid-associated bacterial protein BA894_10710 PF07208 Protein of unknown function (DUF1414) BA894_10715 PF00884 Sulfatase BA894_10715 PF11893 Domain of unknown function (DUF3413) BA894_10725 PF01497 Periplasmic binding protein BA894_10730 PF00593 TonB dependent receptor BA894_10730 PF07715 TonB-dependent Receptor Plug Domain BA894_10735 PF01032 FecCD transport family BA894_10740 PF01032 FecCD transport family BA894_10745 PF00005 ABC transporter BA894_10750 PF01037 Lrp/AsnC ligand binding domain BA894_10755 PF01053 Cys/Met metabolism PLP-dependent enzyme BA894_10760 PF00497 Bacterial extracellular solute-binding proteins, family 3 BA894_10765 PF00528 Binding-protein-dependent transport system inner membrane component BA894_10770 PF00005 ABC transporter BA894_10775 PF00850 Histone deacetylase domain BA894_10780 PF00106 short chain dehydrogenase BA894_10785 PF01751 Toprim domain BA894_10785 PF01131 DNA topoisomerase BA894_10790 PF00881 Nitroreductase family BA894_10795 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BA894_10795 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA894_10800 PF01343 Peptidase family S49 BA894_10805 PF00710 Asparaginase, N-terminal BA894_10805 PF17763 Glutaminase/Asparaginase C-terminal domain BA894_10810 PF07023 Protein of unknown function (DUF1315) BA894_10820 PF01641 SelR domain BA894_10825 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BA894_10825 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BA894_10830 PF01263 Aldose 1-epimerase BA894_10835 PF13847 Methyltransferase domain BA894_10850 PF00245 Alkaline phosphatase BA894_10855 PF05552 Conserved TM helix BA894_10855 PF00924 Mechanosensitive ion channel BA894_10860 PF03692 Putative zinc- or iron-chelating domain BA894_10865 PF04226 Transglycosylase associated protein BA894_10870 PF03692 Putative zinc- or iron-chelating domain BA894_10875 PF00230 Major intrinsic protein BA894_10880 PF02132 RecR protein BA894_10880 PF13662 Toprim domain BA894_10885 PF02575 YbaB/EbfC DNA-binding family BA894_10890 PF12169 DNA polymerase III subunits gamma and tau domain III BA894_10890 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding BA894_10890 PF12170 DNA polymerase III tau subunit V interacting with alpha BA894_10895 PF00156 Phosphoribosyl transferase domain BA894_10900 PF04304 Protein of unknown function (DUF454) BA894_10905 PF00072 Response regulator receiver domain BA894_10910 PF03466 LysR substrate binding domain BA894_10910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_10915 PF02278 Polysaccharide lyase family 8, super-sandwich domain BA894_10915 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain BA894_10915 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain BA894_10920 PF00156 Phosphoribosyl transferase domain BA894_10925 PF02674 Colicin V production protein BA894_10930 PF05036 Sporulation related domain BA894_10935 PF02875 Mur ligase family, glutamate ligase domain BA894_10935 PF08245 Mur ligase middle domain BA894_10940 PF01039 Carboxyl transferase domain BA894_10940 PF17848 Acetyl-coA carboxylase zinc finger domain BA894_10945 PF01416 tRNA pseudouridine synthase BA894_10955 PF01118 Semialdehyde dehydrogenase, NAD binding domain BA894_10955 PF02774 Semialdehyde dehydrogenase, dimerisation domain BA894_10960 PF11890 Domain of unknown function (DUF3410) BA894_10960 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BA894_10960 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BA894_10965 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA894_10970 PF08220 DeoR-like helix-turn-helix domain BA894_10970 PF00455 DeoR C terminal sensor domain BA894_10980 PF00109 Beta-ketoacyl synthase, N-terminal domain BA894_10980 PF02801 Beta-ketoacyl synthase, C-terminal domain BA894_10985 PF01266 FAD dependent oxidoreductase BA894_10985 PF05430 S-adenosyl-L-methionine-dependent methyltransferase BA894_10990 PF03358 NADPH-dependent FMN reductase BA894_10995 PF08891 YfcL protein BA894_11000 PF04315 Elongation factor P hydroxylase BA894_11005 PF03458 UPF0126 domain BA894_11010 PF01264 Chorismate synthase BA894_11015 PF05175 Methyltransferase small domain BA894_11020 PF01713 Smr domain BA894_11025 PF00300 Histidine phosphatase superfamily (branch 1) BA894_11030 PF00675 Insulinase (Peptidase family M16) BA894_11030 PF16187 Middle or third domain of peptidase_M16 BA894_11030 PF05193 Peptidase M16 inactive domain BA894_11040 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BA894_11040 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BA894_11040 PF00378 Enoyl-CoA hydratase/isomerase BA894_11045 PF00108 Thiolase, N-terminal domain BA894_11045 PF02803 Thiolase, C-terminal domain BA894_11050 PF04542 Sigma-70 region 2 BA894_11050 PF08281 Sigma-70, region 4 BA894_11060 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) BA894_11065 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) BA894_11070 PF04333 MlaA lipoprotein BA894_11080 PF03918 Cytochrome C biogenesis protein BA894_11085 PF08534 Redoxin BA894_11090 PF01578 Cytochrome C assembly protein BA894_11090 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal BA894_11095 PF03100 CcmE BA894_11100 PF04995 Heme exporter protein D (CcmD) BA894_11105 PF01578 Cytochrome C assembly protein BA894_11110 PF03379 CcmB protein BA894_11115 PF00005 ABC transporter BA894_11125 PF01584 CheW-like domain BA894_11135 PF13614 AAA domain BA894_11140 PF00072 Response regulator receiver domain BA894_11140 PF01339 CheB methylesterase BA894_11145 PF01584 CheW-like domain BA894_11145 PF07194 P2 response regulator binding domain BA894_11145 PF02895 Signal transducing histidine kinase, homodimeric domain BA894_11145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA894_11145 PF01627 Hpt domain BA894_11150 PF04344 Chemotaxis phosphatase, CheZ BA894_11155 PF00072 Response regulator receiver domain BA894_11160 PF04542 Sigma-70 region 2 BA894_11160 PF04545 Sigma-70, region 4 BA894_11160 PF04539 Sigma-70 region 3 BA894_11165 PF10609 NUBPL iron-transfer P-loop NTPase BA894_11170 PF00448 SRP54-type protein, GTPase domain BA894_11180 PF01312 FlhB HrpN YscU SpaS Family BA894_11185 PF01311 Bacterial export proteins, family 1 BA894_11190 PF01313 Bacterial export proteins, family 3 BA894_11195 PF00813 FliP family BA894_11200 PF04347 Flagellar biosynthesis protein, FliO BA894_11205 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BA894_11210 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BA894_11210 PF02154 Flagellar motor switch protein FliM BA894_11230 PF18269 T3SS EscN ATPase C-terminal domain BA894_11230 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BA894_11240 PF01706 FliG C-terminal domain BA894_11240 PF14841 FliG middle domain BA894_11240 PF14842 FliG N-terminal domain BA894_11245 PF01514 Secretory protein of YscJ/FliF family BA894_11245 PF08345 Flagellar M-ring protein C-terminal BA894_11250 PF02049 Flagellar hook-basal body complex protein FliE BA894_11255 PF00072 Response regulator receiver domain BA894_11255 PF02954 Bacterial regulatory protein, Fis family BA894_11255 PF00158 Sigma-54 interaction domain BA894_11260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA894_11260 PF00512 His Kinase A (phospho-acceptor) domain BA894_11265 PF01590 GAF domain BA894_11265 PF02954 Bacterial regulatory protein, Fis family BA894_11265 PF00158 Sigma-54 interaction domain BA894_11275 PF02561 Flagellar protein FliS BA894_11285 PF07195 Flagellar hook-associated protein 2 C-terminus BA894_11285 PF02465 Flagellar hook-associated protein 2 N-terminus BA894_11285 PF07196 Flagellin hook IN motif BA894_11290 PF03646 FlaG protein BA894_11295 PF00700 Bacterial flagellin C-terminal helical region BA894_11295 PF07196 Flagellin hook IN motif BA894_11295 PF00669 Bacterial flagellin N-terminal helical region BA894_11300 PF07196 Flagellin hook IN motif BA894_11300 PF00700 Bacterial flagellin C-terminal helical region BA894_11300 PF00669 Bacterial flagellin N-terminal helical region BA894_11305 PF00669 Bacterial flagellin N-terminal helical region BA894_11305 PF00700 Bacterial flagellin C-terminal helical region BA894_11305 PF07196 Flagellin hook IN motif BA894_11310 PF04261 Dyp-type peroxidase family BA894_11315 PF11143 Protein of unknown function (DUF2919) BA894_11325 PF13698 Domain of unknown function (DUF4156) BA894_11335 PF03960 ArsC family BA894_11340 PF01546 Peptidase family M20/M25/M40 BA894_11340 PF07687 Peptidase dimerisation domain BA894_11355 PF06804 NlpB/DapX lipoprotein BA894_11360 PF00701 Dihydrodipicolinate synthetase family BA894_11365 PF01842 ACT domain BA894_11395 PF00578 AhpC/TSA family BA894_11455 PF02798 Glutathione S-transferase, N-terminal domain BA894_11460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_11460 PF03466 LysR substrate binding domain BA894_11495 PF13411 MerR HTH family regulatory protein BA894_11500 PF02627 Carboxymuconolactone decarboxylase family BA894_11510 PF08502 LeuA allosteric (dimerisation) domain BA894_11510 PF00682 HMGL-like BA894_11520 PF01594 AI-2E family transporter BA894_11530 PF01435 Peptidase family M48 BA894_11530 PF13181 Tetratricopeptide repeat BA894_11535 PF03960 ArsC family BA894_11540 PF03358 NADPH-dependent FMN reductase BA894_11555 PF00860 Permease family BA894_11565 PF00586 AIR synthase related protein, N-terminal domain BA894_11565 PF02769 AIR synthase related protein, C-terminal domain BA894_11570 PF00551 Formyl transferase BA894_11575 PF13230 Glutamine amidotransferases class-II BA894_11580 PF13580 SIS domain BA894_11585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BA894_11585 PF09317 Domain of unknown function (DUF1974) BA894_11585 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BA894_11585 PF02770 Acyl-CoA dehydrogenase, middle domain BA894_11590 PF00916 Sulfate permease family BA894_11590 PF01740 STAS domain BA894_11600 PF00929 Exonuclease BA894_11605 PF00075 RNase H BA894_11610 PF08241 Methyltransferase domain BA894_11615 PF00753 Metallo-beta-lactamase superfamily BA894_11615 PF16123 Hydroxyacylglutathione hydrolase C-terminus BA894_11620 PF01464 Transglycosylase SLT domain BA894_11620 PF01476 LysM domain BA894_11630 PF03372 Endonuclease/Exonuclease/phosphatase family BA894_11635 PF00543 Nitrogen regulatory protein P-II BA894_11640 PF00034 Cytochrome c BA894_11645 PF01171 PP-loop family BA894_11645 PF11734 TilS substrate C-terminal domain BA894_11645 PF09179 TilS substrate binding domain BA894_11650 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BA894_11655 PF01336 OB-fold nucleic acid binding domain BA894_11655 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BA894_11655 PF02811 PHP domain BA894_11655 PF14579 Helix-hairpin-helix motif BA894_11655 PF07733 Bacterial DNA polymerase III alpha NTPase domain BA894_11660 PF01351 Ribonuclease HII BA894_11665 PF02684 Lipid-A-disaccharide synthetase BA894_11670 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 BA894_11670 PF00132 Bacterial transferase hexapeptide (six repeats) BA894_11675 PF07977 FabA-like domain BA894_11680 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD BA894_11680 PF00132 Bacterial transferase hexapeptide (six repeats) BA894_11685 PF03938 Outer membrane protein (OmpH-like) BA894_11690 PF07244 Surface antigen variable number repeat BA894_11690 PF01103 Surface antigen BA894_11695 PF02163 Peptidase family M50 BA894_11695 PF17820 PDZ domain BA894_11700 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BA894_11700 PF13288 DXP reductoisomerase C-terminal domain BA894_11700 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BA894_11710 PF01255 Putative undecaprenyl diphosphate synthase BA894_11715 PF01765 Ribosome recycling factor BA894_11720 PF00696 Amino acid kinase family BA894_11725 PF00889 Elongation factor TS BA894_11730 PF00318 Ribosomal protein S2 BA894_11735 PF00557 Metallopeptidase family M24 BA894_11740 PF01842 ACT domain BA894_11740 PF08335 GlnD PII-uridylyltransferase BA894_11740 PF01909 Nucleotidyltransferase domain BA894_11740 PF01966 HD domain BA894_11745 PF11944 Protein of unknown function (DUF3461) BA894_11750 PF00849 RNA pseudouridylate synthase BA894_11780 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BA894_11785 PF03806 AbgT putative transporter family BA894_11790 PF00444 Ribosomal protein L36 BA894_11795 PF01197 Ribosomal protein L31 BA894_11800 PF01980 tRNA-methyltransferase O BA894_11800 PF18389 TrmO C-terminal domain BA894_11805 PF03129 Anticodon binding domain BA894_11805 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BA894_11805 PF04073 Aminoacyl-tRNA editing domain BA894_11810 PF06786 Uncharacterised protein family (UPF0253) BA894_11820 PF00209 Sodium:neurotransmitter symporter family BA894_11830 PF03449 Transcription elongation factor, N-terminal BA894_11830 PF01272 Transcription elongation factor, GreA/GreB, C-term BA894_11835 PF00271 Helicase conserved C-terminal domain BA894_11835 PF00570 HRDC domain BA894_11835 PF09382 RQC domain BA894_11835 PF16124 RecQ zinc-binding BA894_11835 PF00270 DEAD/DEAH box helicase BA894_11840 PF11799 impB/mucB/samB family C-terminal domain BA894_11840 PF11798 IMS family HHH motif BA894_11840 PF00817 impB/mucB/samB family BA894_11850 PF04400 (Na+)-NQR maturation NqrM BA894_11855 PF02424 ApbE family BA894_11860 PF00175 Oxidoreductase NAD-binding domain BA894_11860 PF00111 2Fe-2S iron-sulfur cluster binding domain BA894_11860 PF00970 Oxidoreductase FAD-binding domain BA894_11865 PF02508 Rnf-Nqr subunit, membrane protein BA894_11870 PF02508 Rnf-Nqr subunit, membrane protein BA894_11875 PF04205 FMN-binding domain BA894_11880 PF03116 NQR2, RnfD, RnfE family BA894_11885 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) BA894_11885 PF11973 NQRA C-terminal domain BA894_11890 PF01722 BolA-like protein BA894_11895 PF05175 Methyltransferase small domain BA894_11905 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BA894_11910 PF07690 Major Facilitator Superfamily BA894_11920 PF04545 Sigma-70, region 4 BA894_11920 PF04542 Sigma-70 region 2 BA894_11935 PF03502 Nucleoside-specific channel-forming protein, Tsx BA894_11940 PF02558 Ketopantoate reductase PanE/ApbA BA894_11940 PF08546 Ketopantoate reductase PanE/ApbA C terminal BA894_11945 PF01965 DJ-1/PfpI family BA894_11950 PF00266 Aminotransferase class-V BA894_11955 PF07694 5TMR of 5TMR-LYT BA894_11955 PF00990 Diguanylate cyclase, GGDEF domain BA894_11960 PF02657 Fe-S metabolism associated domain BA894_11965 PF00899 ThiF family BA894_11970 PF03562 MltA specific insert domain BA894_11970 PF06725 3D domain BA894_11980 PF00583 Acetyltransferase (GNAT) family BA894_11980 PF00696 Amino acid kinase family BA894_11985 PF13538 UvrD-like helicase C-terminal domain BA894_11990 PF00580 UvrD/REP helicase N-terminal domain BA894_11990 PF12705 PD-(D/E)XK nuclease superfamily BA894_11990 PF13361 UvrD-like helicase C-terminal domain BA894_12000 PF17946 RecC C-terminal domain BA894_12005 PF00884 Sulfatase BA894_12005 PF11893 Domain of unknown function (DUF3413) BA894_12015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_12015 PF03466 LysR substrate binding domain BA894_12020 PF07130 YebG protein BA894_12030 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle BA894_12030 PF14602 Hexapeptide repeat of succinyl-transferase BA894_12035 PF03009 Glycerophosphoryl diester phosphodiesterase family BA894_12040 PF07690 Major Facilitator Superfamily BA894_12045 PF00230 Major intrinsic protein BA894_12050 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BA894_12050 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BA894_12055 PF08220 DeoR-like helix-turn-helix domain BA894_12055 PF00455 DeoR C terminal sensor domain BA894_12060 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BA894_12060 PF01266 FAD dependent oxidoreductase BA894_12065 PF01544 CorA-like Mg2+ transporter protein BA894_12085 PF00356 Bacterial regulatory proteins, lacI family BA894_12090 PF00356 Bacterial regulatory proteins, lacI family BA894_12095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_12095 PF03466 LysR substrate binding domain BA894_12130 PF00437 Type II/IV secretion system protein BA894_12160 PF00263 Bacterial type II and III secretion system protein BA894_12160 PF04972 BON domain BA894_12160 PF13629 Pilus formation protein N terminal region BA894_12190 PF12833 Helix-turn-helix domain BA894_12190 PF02805 Metal binding domain of Ada BA894_12195 PF00501 AMP-binding enzyme BA894_12200 PF03466 LysR substrate binding domain BA894_12200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_12205 PF00009 Elongation factor Tu GTP binding domain BA894_12205 PF00679 Elongation factor G C-terminus BA894_12205 PF14492 Elongation Factor G, domain II BA894_12205 PF03144 Elongation factor Tu domain 2 BA894_12205 PF03764 Elongation factor G, domain IV BA894_12210 PF18073 Rubredoxin metal binding domain BA894_12220 PF18429 Domain of unknown function (DUF5609) BA894_12230 PF01048 Phosphorylase superfamily BA894_12235 PF01676 Metalloenzyme superfamily BA894_12240 PF00591 Glycosyl transferase family, a/b domain BA894_12240 PF02885 Glycosyl transferase family, helical bundle domain BA894_12240 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BA894_12245 PF01791 DeoC/LacD family aldolase BA894_12250 PF07670 Nucleoside recognition BA894_12250 PF07662 Na+ dependent nucleoside transporter C-terminus BA894_12250 PF01773 Na+ dependent nucleoside transporter N-terminus BA894_12255 PF01026 TatD related DNase BA894_12265 PF00009 Elongation factor Tu GTP binding domain BA894_12265 PF03144 Elongation factor Tu domain 2 BA894_12265 PF16658 Class II release factor RF3, C-terminal domain BA894_12280 PF13508 Acetyltransferase (GNAT) domain BA894_12290 PF00563 EAL domain BA894_12290 PF03707 Bacterial signalling protein N terminal repeat BA894_12290 PF00990 Diguanylate cyclase, GGDEF domain BA894_12305 PF01554 MatE BA894_12310 PF13181 Tetratricopeptide repeat BA894_12310 PF07719 Tetratricopeptide repeat BA894_12315 PF01138 3' exoribonuclease family, domain 1 BA894_12315 PF03725 3' exoribonuclease family, domain 2 BA894_12315 PF00575 S1 RNA binding domain BA894_12315 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BA894_12315 PF00013 KH domain BA894_12320 PF00312 Ribosomal protein S15 BA894_12325 PF16198 tRNA pseudouridylate synthase B C-terminal domain BA894_12325 PF01509 TruB family pseudouridylate synthase (N terminal domain) BA894_12325 PF09157 Pseudouridine synthase II TruB, C-terminal BA894_12330 PF02033 Ribosome-binding factor A BA894_12335 PF00009 Elongation factor Tu GTP binding domain BA894_12335 PF11987 Translation-initiation factor 2 BA894_12335 PF04760 Translation initiation factor IF-2, N-terminal region BA894_12335 PF08364 Bacterial translation initiation factor IF-2 associated region BA894_12340 PF08529 NusA N-terminal domain BA894_12340 PF13184 NusA-like KH domain BA894_12340 PF00575 S1 RNA binding domain BA894_12345 PF17384 RimP C-terminal SH3 domain BA894_12345 PF02576 RimP N-terminal domain BA894_12360 PF03840 Preprotein translocase SecG subunit BA894_12365 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BA894_12365 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BA894_12365 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BA894_12365 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BA894_12370 PF00809 Pterin binding enzyme BA894_12375 PF01434 Peptidase family M41 BA894_12375 PF17862 AAA+ lid domain BA894_12375 PF00004 ATPase family associated with various cellular activities (AAA) BA894_12375 PF06480 FtsH Extracellular BA894_12380 PF01728 FtsJ-like methyltransferase BA894_12385 PF01985 CRS1 / YhbY (CRM) domain BA894_12390 PF01272 Transcription elongation factor, GreA/GreB, C-term BA894_12390 PF03449 Transcription elongation factor, N-terminal BA894_12395 PF13609 Gram-negative porin BA894_12400 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family BA894_12415 PF13276 HTH-like domain BA894_12415 PF00665 Integrase core domain BA894_12415 PF13333 Integrase core domain BA894_12420 PF00579 tRNA synthetases class I (W and Y) BA894_12425 PF01551 Peptidase family M23 BA894_12425 PF01476 LysM domain BA894_12425 PF08525 Opacity-associated protein A N-terminal motif BA894_12430 PF00873 AcrB/AcrD/AcrF family BA894_12435 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BA894_12440 PF01521 Iron-sulphur cluster biosynthesis BA894_12445 PF00202 Aminotransferase class-III BA894_12450 PF01594 AI-2E family transporter BA894_12455 PF08468 Methyltransferase small domain N-terminal BA894_12455 PF05175 Methyltransferase small domain BA894_12460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA894_12460 PF00512 His Kinase A (phospho-acceptor) domain BA894_12460 PF00072 Response regulator receiver domain BA894_12460 PF09308 LuxQ, periplasmic BA894_12465 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA894_12470 PF00528 Binding-protein-dependent transport system inner membrane component BA894_12475 PF00528 Binding-protein-dependent transport system inner membrane component BA894_12475 PF12911 N-terminal TM domain of oligopeptide transport permease C BA894_12480 PF00005 ABC transporter BA894_12480 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA894_12485 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA894_12485 PF00005 ABC transporter BA894_12495 PF01869 BadF/BadG/BcrA/BcrD ATPase family BA894_12500 PF02838 Glycosyl hydrolase family 20, domain 2 BA894_12500 PF00728 Glycosyl hydrolase family 20, catalytic domain BA894_12505 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain BA894_12505 PF06165 Glycosyltransferase family 36 BA894_12510 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BA894_12510 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BA894_12510 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BA894_12510 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BA894_12525 PF13416 Bacterial extracellular solute-binding protein BA894_12530 PF00909 Ammonium Transporter Family BA894_12535 PF00543 Nitrogen regulatory protein P-II BA894_12540 PF06062 Uncharacterised protein family (UPF0231) BA894_12545 PF13556 PucR C-terminal helix-turn-helix domain BA894_12545 PF17853 GGDEF-like domain BA894_12545 PF05651 Putative sugar diacid recognition BA894_12550 PF02447 GntP family permease BA894_12555 PF02595 Glycerate kinase family BA894_12560 PF00330 Aconitase family (aconitate hydratase) BA894_12560 PF11791 Aconitate B N-terminal domain BA894_12560 PF06434 Aconitate hydratase 2 N-terminus BA894_12565 PF01734 Patatin-like phospholipase BA894_12570 PF14814 Bifunctional transglycosylase second domain BA894_12570 PF00905 Penicillin binding protein transpeptidase domain BA894_12570 PF00912 Transglycosylase BA894_12575 PF00271 Helicase conserved C-terminal domain BA894_12575 PF00270 DEAD/DEAH box helicase BA894_12575 PF04408 Helicase associated domain (HA2) BA894_12575 PF08482 ATP-dependent helicase C-terminal BA894_12585 PF01258 Prokaryotic dksA/traR C4-type zinc finger BA894_12590 PF00749 tRNA synthetases class I (E and Q), catalytic domain BA894_12595 PF12626 Polymerase A arginine-rich C-terminus BA894_12595 PF12627 Probable RNA and SrmB- binding site of polymerase A BA894_12595 PF01743 Poly A polymerase head domain BA894_12600 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BA894_12605 PF02548 Ketopantoate hydroxymethyltransferase BA894_12610 PF02569 Pantoate-beta-alanine ligase BA894_12615 PF01061 ABC-2 type transporter BA894_12620 PF00005 ABC transporter BA894_12625 PF00916 Sulfate permease family BA894_12625 PF01740 STAS domain BA894_12630 PF00484 Carbonic anhydrase BA894_12635 PF00156 Phosphoribosyl transferase domain BA894_12640 PF00440 Bacterial regulatory proteins, tetR family BA894_12645 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BA894_12645 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA894_12650 PF02817 e3 binding domain BA894_12650 PF00364 Biotin-requiring enzyme BA894_12650 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BA894_12655 PF00456 Transketolase, thiamine diphosphate binding domain BA894_12655 PF17831 Pyruvate dehydrogenase E1 component middle domain BA894_12660 PF00392 Bacterial regulatory proteins, gntR family BA894_12660 PF07729 FCD domain BA894_12665 PF01510 N-acetylmuramoyl-L-alanine amidase BA894_12670 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BA894_12670 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BA894_12680 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BA894_12680 PF00437 Type II/IV secretion system protein BA894_12685 PF00482 Type II secretion system (T2SS), protein F BA894_12690 PF01478 Type IV leader peptidase family BA894_12690 PF06750 Bacterial Peptidase A24 N-terminal domain BA894_12695 PF01121 Dephospho-CoA kinase BA894_12700 PF07072 Cell division protein BA894_12705 PF03884 DNA gyrase inhibitor YacG BA894_12710 PF01245 Ribosomal protein L19 BA894_12715 PF01746 tRNA (Guanine-1)-methyltransferase BA894_12720 PF01782 RimM N-terminal domain BA894_12720 PF05239 PRC-barrel domain BA894_12725 PF00886 Ribosomal protein S16 BA894_12730 PF00448 SRP54-type protein, GTPase domain BA894_12730 PF02978 Signal peptide binding domain BA894_12730 PF02881 SRP54-type protein, helical bundle domain BA894_12735 PF01578 Cytochrome C assembly protein BA894_12740 PF03471 Transporter associated domain BA894_12740 PF01595 Cyclin M transmembrane N-terminal domain BA894_12740 PF00571 CBS domain BA894_12745 PF02664 S-Ribosylhomocysteinase (LuxS) BA894_12755 PF04262 Glutamate-cysteine ligase BA894_12760 PF00675 Insulinase (Peptidase family M16) BA894_12760 PF05193 Peptidase M16 inactive domain BA894_12765 PF09335 SNARE associated Golgi protein BA894_12770 PF00107 Zinc-binding dehydrogenase BA894_12770 PF08240 Alcohol dehydrogenase GroES-like domain BA894_12775 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit BA894_12780 PF00364 Biotin-requiring enzyme BA894_12780 PF02436 Conserved carboxylase domain BA894_12780 PF00682 HMGL-like BA894_12785 PF04277 Oxaloacetate decarboxylase, gamma chain BA894_12840 PF02599 Global regulator protein family BA894_12845 PF00696 Amino acid kinase family BA894_12845 PF01842 ACT domain BA894_12845 PF13840 ACT domain BA894_12850 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BA894_12850 PF01411 tRNA synthetases class II (A) BA894_12850 PF02272 DHHA1 domain BA894_12855 PF02631 RecX family BA894_12860 PF00154 recA bacterial DNA recombination protein BA894_12865 PF02464 Competence-damaged protein BA894_12870 PF05190 MutS family domain IV BA894_12870 PF01624 MutS domain I BA894_12870 PF05188 MutS domain II BA894_12870 PF00488 MutS domain V BA894_12870 PF05192 MutS domain III BA894_12880 PF01551 Peptidase family M23 BA894_12880 PF01476 LysM domain BA894_12890 PF01975 Survival protein SurE BA894_12895 PF01142 tRNA pseudouridine synthase D (TruD) BA894_12900 PF02542 YgbB family BA894_12905 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BA894_12910 PF04977 Septum formation initiator BA894_12915 PF00113 Enolase, C-terminal TIM barrel domain BA894_12915 PF03952 Enolase, N-terminal domain BA894_12920 PF06418 CTP synthase N-terminus BA894_12920 PF00117 Glutamine amidotransferase class-I BA894_12930 PF03819 MazG nucleotide pyrophosphohydrolase domain BA894_12935 PF13291 ACT domain BA894_12935 PF04607 Region found in RelA / SpoT proteins BA894_12935 PF02824 TGS domain BA894_12940 PF01938 TRAM domain BA894_12940 PF05958 tRNA (Uracil-5-)-methyltransferase BA894_12945 PF01627 Hpt domain BA894_12945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA894_12945 PF00672 HAMP domain BA894_12945 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BA894_12945 PF00072 Response regulator receiver domain BA894_12945 PF00512 His Kinase A (phospho-acceptor) domain BA894_12950 PF01648 4'-phosphopantetheinyl transferase superfamily BA894_12955 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ BA894_12960 PF02565 Recombination protein O C terminal BA894_12960 PF11967 Recombination protein O N terminal BA894_12965 PF01926 50S ribosome-binding GTPase BA894_12965 PF07650 KH domain BA894_12970 PF14622 Ribonuclease-III-like BA894_12970 PF00035 Double-stranded RNA binding motif BA894_12975 PF10502 Signal peptidase, peptidase S26 BA894_12980 PF06421 GTP-binding protein LepA C-terminus BA894_12980 PF03144 Elongation factor Tu domain 2 BA894_12980 PF00009 Elongation factor Tu GTP binding domain BA894_12980 PF00679 Elongation factor G C-terminus BA894_12990 PF03888 MucB/RseB N-terminal domain BA894_12990 PF17188 MucB/RseB C-terminal domain BA894_12995 PF03873 Anti sigma-E protein RseA, C-terminal domain BA894_12995 PF03872 Anti sigma-E protein RseA, N-terminal domain BA894_13000 PF04542 Sigma-70 region 2 BA894_13000 PF08281 Sigma-70, region 4 BA894_13005 PF00890 FAD binding domain BA894_13005 PF02910 Fumarate reductase flavoprotein C-term BA894_13015 PF03937 Flavinator of succinate dehydrogenase BA894_13020 PF01571 Aminomethyltransferase folate-binding domain BA894_13035 PF01494 FAD binding domain BA894_13040 PF01494 FAD binding domain BA894_13045 PF03695 Uncharacterised protein family (UPF0149) BA894_13050 PF05164 Cell division protein ZapA BA894_13060 PF01812 5-formyltetrahydrofolate cyclo-ligase family BA894_13065 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BA894_13070 PF01842 ACT domain BA894_13070 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BA894_13070 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BA894_13075 PF04402 Protein of unknown function (DUF541) BA894_13080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_13080 PF03466 LysR substrate binding domain BA894_13085 PF01810 LysE type translocator BA894_13090 PF00924 Mechanosensitive ion channel BA894_13090 PF05552 Conserved TM helix BA894_13095 PF01116 Fructose-bisphosphate aldolase class-II BA894_13100 PF00162 Phosphoglycerate kinase BA894_13105 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BA894_13105 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BA894_13110 PF02780 Transketolase, C-terminal domain BA894_13110 PF02779 Transketolase, pyrimidine binding domain BA894_13110 PF00456 Transketolase, thiamine diphosphate binding domain BA894_13120 PF02773 S-adenosylmethionine synthetase, C-terminal domain BA894_13120 PF02772 S-adenosylmethionine synthetase, central domain BA894_13120 PF00438 S-adenosylmethionine synthetase, N-terminal domain BA894_13130 PF17283 SprT-like zinc ribbon domain BA894_13130 PF10263 SprT-like family BA894_13135 PF04231 Endonuclease I BA894_13140 PF04452 RNA methyltransferase BA894_13145 PF02951 Prokaryotic glutathione synthetase, N-terminal domain BA894_13145 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain BA894_13150 PF02622 Uncharacterized ACR, COG1678 BA894_13155 PF03652 Holliday junction resolvase BA894_13160 PF00437 Type II/IV secretion system protein BA894_13165 PF00437 Type II/IV secretion system protein BA894_13170 PF01168 Alanine racemase, N-terminal domain BA894_13175 PF03807 NADP oxidoreductase coenzyme F420-dependent BA894_13175 PF14748 Pyrroline-5-carboxylate reductase dimerisation BA894_13180 PF02325 YGGT family BA894_13185 PF02594 Uncharacterised ACR, YggU family COG1872 BA894_13195 PF01725 Ham1 family BA894_13200 PF06969 HemN C-terminal domain BA894_13200 PF04055 Radical SAM superfamily BA894_13205 PF04960 Glutaminase BA894_13210 PF02086 D12 class N6 adenine-specific DNA methyltransferase BA894_13215 PF02390 Putative methyltransferase BA894_13220 PF00730 HhH-GPD superfamily base excision DNA repair protein BA894_13220 PF00633 Helix-hairpin-helix motif BA894_13220 PF14815 NUDIX domain BA894_13225 PF04362 Bacterial Fe(2+) trafficking BA894_13230 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain BA894_13230 PF01464 Transglycosylase SLT domain BA894_13270 PF00672 HAMP domain BA894_13270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA894_13270 PF17200 Single Cache domain 2 BA894_13345 PF00106 short chain dehydrogenase BA894_13350 PF01758 Sodium Bile acid symporter family BA894_13360 PF00106 short chain dehydrogenase BA894_13365 PF10011 Predicted membrane protein (DUF2254) BA894_13375 PF03739 Lipopolysaccharide export system permease LptF/LptG BA894_13380 PF03739 Lipopolysaccharide export system permease LptF/LptG BA894_13385 PF02789 Cytosol aminopeptidase family, N-terminal domain BA894_13385 PF00883 Cytosol aminopeptidase family, catalytic domain BA894_13390 PF04364 DNA polymerase III chi subunit, HolC BA894_13395 PF10458 Valyl tRNA synthetase tRNA binding arm BA894_13395 PF08264 Anticodon-binding domain of tRNA BA894_13395 PF00133 tRNA synthetases class I (I, L, M and V) BA894_13405 PF00583 Acetyltransferase (GNAT) family BA894_13415 PF06877 Regulator of ribonuclease activity B BA894_13425 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BA894_13425 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BA894_13430 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BA894_13430 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BA894_13435 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain BA894_13435 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain BA894_13440 PF01042 Endoribonuclease L-PSP BA894_13445 PF01553 Acyltransferase BA894_13450 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BA894_13455 PF01722 BolA-like protein BA894_13465 PF05494 MlaC protein BA894_13470 PF02470 MlaD protein BA894_13475 PF02405 Permease MlaE BA894_13480 PF00005 ABC transporter BA894_13485 PF01699 Sodium/calcium exchanger protein BA894_13490 PF01380 SIS domain BA894_13490 PF00571 CBS domain BA894_13500 PF03968 OstA-like protein BA894_13505 PF00005 ABC transporter BA894_13505 PF12399 Branched-chain amino acid ATP-binding cassette transporter BA894_13510 PF04552 Sigma-54, DNA binding domain BA894_13510 PF04963 Sigma-54 factor, core binding domain BA894_13510 PF00309 Sigma-54 factor, Activator interacting domain (AID) BA894_13515 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BA894_13520 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BA894_13525 PF03668 P-loop ATPase protein family BA894_13530 PF00381 PTS HPr component phosphorylation site BA894_13535 PF03448 MgtE intracellular N domain BA894_13535 PF01769 Divalent cation transporter BA894_13535 PF00571 CBS domain BA894_13540 PF01523 Putative modulator of DNA gyrase BA894_13545 PF04751 Protein of unknown function (DUF615) BA894_13550 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BA894_13550 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BA894_13555 PF00849 RNA pseudouridylate synthase BA894_13565 PF12137 RNA polymerase recycling family C-terminal BA894_13565 PF00271 Helicase conserved C-terminal domain BA894_13565 PF00176 SNF2 family N-terminal domain BA894_13565 PF18339 RapA N-terminal Tudor like domain 1 BA894_13565 PF18337 RapA N-terminal Tudor like domain BA894_13570 PF13638 PIN domain BA894_13570 PF02562 PhoH-like protein BA894_13575 PF01523 Putative modulator of DNA gyrase BA894_13580 PF00795 Carbon-nitrogen hydrolase BA894_13585 PF13116 Protein of unknown function BA894_13585 PF13502 AsmA-like C-terminal region BA894_13590 PF10150 Ribonuclease E/G family BA894_13590 PF00575 S1 RNA binding domain BA894_13595 PF02545 Maf-like protein BA894_13600 PF04093 rod shape-determining protein MreD BA894_13605 PF04085 rod shape-determining protein MreC BA894_13645 PF07963 Prokaryotic N-terminal methylation motif BA894_13645 PF00114 Pilin (bacterial filament) BA894_13655 PF00482 Type II secretion system (T2SS), protein F BA894_13660 PF00437 Type II/IV secretion system protein BA894_13660 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BA894_13670 PF13401 AAA domain BA894_13670 PF01471 Putative peptidoglycan binding domain BA894_13675 PF00263 Bacterial type II and III secretion system protein BA894_13675 PF07660 Secretin and TonB N terminus short domain BA894_13675 PF11741 AMIN domain BA894_13675 PF03958 Bacterial type II/III secretion system short domain BA894_13695 PF00563 EAL domain BA894_13695 PF17157 Gammaproteobacterial periplasmic sensor domain BA894_13695 PF00990 Diguanylate cyclase, GGDEF domain BA894_13700 PF00436 Single-strand binding protein family BA894_13705 PF00196 Bacterial regulatory proteins, luxR family BA894_13710 PF00483 Nucleotidyl transferase BA894_13715 PF17755 UvrA DNA-binding domain BA894_13715 PF00005 ABC transporter BA894_13715 PF17760 UvrA interaction domain BA894_13725 PF00266 Aminotransferase class-V BA894_13730 PF01842 ACT domain BA894_13730 PF00696 Amino acid kinase family BA894_13735 PF02574 Homocysteine S-methyltransferase BA894_13735 PF02310 B12 binding domain BA894_13735 PF00809 Pterin binding enzyme BA894_13735 PF02965 Vitamin B12 dependent methionine synthase, activation domain BA894_13735 PF02607 B12 binding domain BA894_13740 PF00999 Sodium/hydrogen exchanger family BA894_13795 PF01507 Phosphoadenosine phosphosulfate reductase family BA894_13800 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BA894_13800 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BA894_13805 PF00667 FAD binding domain BA894_13805 PF00175 Oxidoreductase NAD-binding domain BA894_13805 PF00258 Flavodoxin BA894_13825 PF01207 Dihydrouridine synthase (Dus) BA894_13830 PF01475 Ferric uptake regulator family BA894_13840 PF00342 Phosphoglucose isomerase BA894_13845 PF01894 Uncharacterised protein family UPF0047 BA894_13850 PF00842 Alanine racemase, C-terminal domain BA894_13850 PF01168 Alanine racemase, N-terminal domain BA894_13855 PF03796 DnaB-like helicase C terminal domain BA894_13855 PF00772 DnaB-like helicase N terminal domain BA894_13865 PF01281 Ribosomal protein L9, N-terminal domain BA894_13865 PF03948 Ribosomal protein L9, C-terminal domain BA894_13870 PF01084 Ribosomal protein S18 BA894_13875 PF00436 Single-strand binding protein family BA894_13880 PF01250 Ribosomal protein S6 BA894_13885 PF00834 Ribulose-phosphate 3 epimerase family BA894_13890 PF02086 D12 class N6 adenine-specific DNA methyltransferase BA894_13900 PF01761 3-dehydroquinate synthase BA894_13905 PF01202 Shikimate kinase BA894_13910 PF03958 Bacterial type II/III secretion system short domain BA894_13910 PF11741 AMIN domain BA894_13910 PF07660 Secretin and TonB N terminus short domain BA894_13910 PF00263 Bacterial type II and III secretion system protein BA894_13935 PF00905 Penicillin binding protein transpeptidase domain BA894_13935 PF00912 Transglycosylase BA894_13935 PF17092 Penicillin-binding protein OB-like domain BA894_13940 PF03466 LysR substrate binding domain BA894_13940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_13945 PF08534 Redoxin BA894_13945 PF00462 Glutaredoxin BA894_13950 PF00583 Acetyltransferase (GNAT) family BA894_13950 PF14698 Argininosuccinate lyase C-terminal BA894_13950 PF00206 Lyase BA894_13955 PF00764 Arginosuccinate synthase BA894_13960 PF00696 Amino acid kinase family BA894_13965 PF01118 Semialdehyde dehydrogenase, NAD binding domain BA894_13965 PF02774 Semialdehyde dehydrogenase, dimerisation domain BA894_13970 PF07687 Peptidase dimerisation domain BA894_13970 PF01546 Peptidase family M20/M25/M40 BA894_13975 PF00311 Phosphoenolpyruvate carboxylase BA894_13985 PF02219 Methylenetetrahydrofolate reductase BA894_13990 PF00696 Amino acid kinase family BA894_13990 PF03447 Homoserine dehydrogenase, NAD binding domain BA894_13990 PF00742 Homoserine dehydrogenase BA894_13995 PF01053 Cys/Met metabolism PLP-dependent enzyme BA894_14000 PF01340 Met Apo-repressor, MetJ BA894_14005 PF03949 Malic enzyme, NAD binding domain BA894_14005 PF00390 Malic enzyme, N-terminal domain BA894_14010 PF00210 Ferritin-like domain BA894_14015 PF03143 Elongation factor Tu C-terminal domain BA894_14015 PF03144 Elongation factor Tu domain 2 BA894_14015 PF00009 Elongation factor Tu GTP binding domain BA894_14020 PF14492 Elongation Factor G, domain II BA894_14020 PF03144 Elongation factor Tu domain 2 BA894_14020 PF00009 Elongation factor Tu GTP binding domain BA894_14020 PF03764 Elongation factor G, domain IV BA894_14020 PF00679 Elongation factor G C-terminus BA894_14025 PF00177 Ribosomal protein S7p/S5e BA894_14030 PF00164 Ribosomal protein S12/S23 BA894_14035 PF04077 DsrH like protein BA894_14040 PF02635 DsrE/DsrF-like family BA894_14045 PF02635 DsrE/DsrF-like family BA894_14050 PF13309 HTH domain BA894_14050 PF08348 YheO-like PAS domain BA894_14055 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BA894_14055 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BA894_14065 PF04102 SlyX BA894_14070 PF01112 Asparaginase BA894_14075 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BA894_14085 PF02254 TrkA-N domain BA894_14085 PF00999 Sodium/hydrogen exchanger family BA894_14090 PF02525 Flavodoxin-like fold BA894_14095 PF00005 ABC transporter BA894_14095 PF12848 ABC transporter BA894_14105 PF00561 alpha/beta hydrolase fold BA894_14110 PF06794 Uncharacterised protein family (UPF0270) BA894_14115 PF00485 Phosphoribulokinase / Uridine kinase family BA894_14120 PF13545 Crp-like helix-turn-helix domain BA894_14120 PF00027 Cyclic nucleotide-binding domain BA894_14130 PF00171 Aldehyde dehydrogenase family BA894_14135 PF04958 Arginine N-succinyltransferase beta subunit BA894_14140 PF00202 Aminotransferase class-III BA894_14145 PF00117 Glutamine amidotransferase class-I BA894_14150 PF00579 tRNA synthetases class I (W and Y) BA894_14155 PF13419 Haloacid dehalogenase-like hydrolase BA894_14160 PF00588 SpoU rRNA Methylase family BA894_14160 PF08032 RNA 2'-O ribose methyltransferase substrate binding BA894_14165 PF17876 Cold shock domain BA894_14165 PF08461 Ribonuclease R winged-helix domain BA894_14165 PF08206 Ribonuclease B OB domain BA894_14165 PF00773 RNB domain BA894_14165 PF00575 S1 RNA binding domain BA894_14170 PF02082 Transcriptional regulator BA894_14175 PF00970 Oxidoreductase FAD-binding domain BA894_14175 PF00175 Oxidoreductase NAD-binding domain BA894_14175 PF00042 Globin BA894_14180 PF08238 Sel1 repeat BA894_14190 PF00709 Adenylosuccinate synthetase BA894_14195 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) BA894_14200 PF01145 SPFH domain / Band 7 family BA894_14205 PF01145 SPFH domain / Band 7 family BA894_14205 PF12221 Bacterial membrane protein N terminal BA894_14210 PF01926 50S ribosome-binding GTPase BA894_14210 PF13167 GTP-binding GTPase N-terminal BA894_14210 PF16360 GTP-binding GTPase Middle Region BA894_14215 PF17209 Hfq protein BA894_14225 PF01119 DNA mismatch repair protein, C-terminal domain BA894_14225 PF08676 MutL C terminal dimerisation domain BA894_14230 PF01520 N-acetylmuramoyl-L-alanine amidase BA894_14235 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BA894_14240 PF08331 Domain of unknown function (DUF1730) BA894_14305 PF00929 Exonuclease BA894_14310 PF03193 RsgA GTPase BA894_14315 PF02666 Phosphatidylserine decarboxylase BA894_14320 PF00939 Sodium:sulfate symporter transmembrane region BA894_14330 PF01676 Metalloenzyme superfamily BA894_14330 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BA894_14335 PF00581 Rhodanese-like domain BA894_14340 PF02556 Preprotein translocase subunit SecB BA894_14345 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BA894_14345 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BA894_14350 PF00132 Bacterial transferase hexapeptide (six repeats) BA894_14350 PF06426 Serine acetyltransferase, N-terminal BA894_14355 PF01551 Peptidase family M23 BA894_14365 PF08360 QacR-like protein, C-terminal region BA894_14365 PF00440 Bacterial regulatory proteins, tetR family BA894_14375 PF00152 tRNA synthetases class II (D, K and N) BA894_14380 PF02910 Fumarate reductase flavoprotein C-term BA894_14380 PF00890 FAD binding domain BA894_14385 PF13085 2Fe-2S iron-sulfur cluster binding domain BA894_14385 PF13183 4Fe-4S dicluster domain BA894_14390 PF02300 Fumarate reductase subunit C BA894_14395 PF02313 Fumarate reductase subunit D BA894_14405 PF01132 Elongation factor P (EF-P) OB domain BA894_14405 PF09285 Elongation factor P, C-terminal BA894_14405 PF08207 Elongation factor P (EF-P) KOW-like domain BA894_14410 PF04055 Radical SAM superfamily BA894_14415 PF02308 MgtC family BA894_14430 PF02796 Helix-turn-helix domain of resolvase BA894_14430 PF00239 Resolvase, N terminal domain BA894_14440 PF00118 TCP-1/cpn60 chaperonin family BA894_14445 PF00166 Chaperonin 10 Kd subunit BA894_14450 PF01554 MatE BA894_14455 PF00365 Phosphofructokinase BA894_14460 PF01545 Cation efflux family BA894_14460 PF16916 Dimerisation domain of Zinc Transporter BA894_14465 PF07813 LTXXQ motif family protein BA894_14470 PF00072 Response regulator receiver domain BA894_14470 PF00486 Transcriptional regulatory protein, C terminal BA894_14475 PF16527 Two-component sensor protein CpxA, periplasmic domain BA894_14475 PF00512 His Kinase A (phospho-acceptor) domain BA894_14475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA894_14475 PF00672 HAMP domain BA894_14480 PF00588 SpoU rRNA Methylase family BA894_14485 PF04186 FxsA cytoplasmic membrane protein BA894_14490 PF10415 Fumarase C C-terminus BA894_14490 PF00206 Lyase BA894_14495 PF03605 Anaerobic c4-dicarboxylate membrane transporter BA894_14500 PF11412 Disulphide bond corrector protein DsbC BA894_14500 PF02683 Cytochrome C biogenesis protein transmembrane region BA894_14505 PF00072 Response regulator receiver domain BA894_14505 PF00196 Bacterial regulatory proteins, luxR family BA894_14510 PF00999 Sodium/hydrogen exchanger family BA894_14510 PF03471 Transporter associated domain BA894_14510 PF02080 TrkA-C domain BA894_14520 PF00474 Sodium:solute symporter family BA894_14530 PF10415 Fumarase C C-terminus BA894_14530 PF00206 Lyase BA894_14535 PF00072 Response regulator receiver domain BA894_14535 PF00512 His Kinase A (phospho-acceptor) domain BA894_14535 PF01627 Hpt domain BA894_14535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA894_14535 PF00672 HAMP domain BA894_14540 PF12832 MFS_1 like family BA894_14555 PF00501 AMP-binding enzyme BA894_14555 PF13193 AMP-binding enzyme C-terminal domain BA894_14555 PF16177 Acetyl-coenzyme A synthetase N-terminus BA894_14560 PF01220 Dehydroquinase class II BA894_14565 PF00364 Biotin-requiring enzyme BA894_14570 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BA894_14570 PF00289 Biotin carboxylase, N-terminal domain BA894_14570 PF02785 Biotin carboxylase C-terminal domain BA894_14580 PF01207 Dihydrouridine synthase (Dus) BA894_14585 PF02954 Bacterial regulatory protein, Fis family BA894_14620 PF13358 DDE superfamily endonuclease BA894_14670 PF00486 Transcriptional regulatory protein, C terminal BA894_14670 PF18500 CadC C-terminal domain 1 BA894_14675 PF13411 MerR HTH family regulatory protein BA894_14685 PF02142 MGS-like domain BA894_14685 PF01808 AICARFT/IMPCHase bienzyme BA894_14690 PF02844 Phosphoribosylglycinamide synthetase, N domain BA894_14690 PF02843 Phosphoribosylglycinamide synthetase, C domain BA894_14690 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BA894_14700 PF00216 Bacterial DNA-binding protein BA894_14705 PF01595 Cyclin M transmembrane N-terminal domain BA894_14705 PF00571 CBS domain BA894_14710 PF04222 Protein of unknown function (DUF416) BA894_14715 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BA894_14720 PF03167 Uracil DNA glycosylase superfamily BA894_14725 PF01208 Uroporphyrinogen decarboxylase (URO-D) BA894_14730 PF00293 NUDIX domain BA894_14730 PF09297 NADH pyrophosphatase zinc ribbon domain BA894_14735 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ BA894_14740 PF04983 RNA polymerase Rpb1, domain 3 BA894_14740 PF00623 RNA polymerase Rpb1, domain 2 BA894_14740 PF05000 RNA polymerase Rpb1, domain 4 BA894_14740 PF04997 RNA polymerase Rpb1, domain 1 BA894_14740 PF04998 RNA polymerase Rpb1, domain 5 BA894_14745 PF00562 RNA polymerase Rpb2, domain 6 BA894_14745 PF04561 RNA polymerase Rpb2, domain 2 BA894_14745 PF10385 RNA polymerase beta subunit external 1 domain BA894_14745 PF04565 RNA polymerase Rpb2, domain 3 BA894_14745 PF04560 RNA polymerase Rpb2, domain 7 BA894_14745 PF04563 RNA polymerase beta subunit BA894_14750 PF00542 Ribosomal protein L7/L12 C-terminal domain BA894_14750 PF16320 Ribosomal protein L7/L12 dimerisation domain BA894_14755 PF00466 Ribosomal protein L10 BA894_14760 PF00687 Ribosomal protein L1p/L10e family BA894_14765 PF03946 Ribosomal protein L11, N-terminal domain BA894_14765 PF00298 Ribosomal protein L11, RNA binding domain BA894_14770 PF00467 KOW motif BA894_14770 PF02357 Transcription termination factor nusG BA894_14775 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BA894_14780 PF00009 Elongation factor Tu GTP binding domain BA894_14780 PF03144 Elongation factor Tu domain 2 BA894_14780 PF03143 Elongation factor Tu C-terminal domain BA894_14805 PF00485 Phosphoribulokinase / Uridine kinase family BA894_14810 PF08279 HTH domain BA894_14810 PF03099 Biotin/lipoate A/B protein ligase family BA894_14810 PF02237 Biotin protein ligase C terminal domain BA894_14815 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BA894_14815 PF01565 FAD binding domain BA894_14825 PF13091 PLD-like domain BA894_14835 PF13358 DDE superfamily endonuclease BA894_14905 PF01177 Asp/Glu/Hydantoin racemase BA894_14915 PF07715 TonB-dependent Receptor Plug Domain BA894_14915 PF00593 TonB dependent receptor BA894_14920 PF05958 tRNA (Uracil-5-)-methyltransferase BA894_14930 PF00440 Bacterial regulatory proteins, tetR family BA894_14935 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA894_14935 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BA894_14940 PF01554 MatE BA894_14945 PF04072 Leucine carboxyl methyltransferase BA894_14950 PF00717 Peptidase S24-like BA894_14950 PF01726 LexA DNA binding domain BA894_14955 PF01553 Acyltransferase BA894_14960 PF01040 UbiA prenyltransferase family BA894_14965 PF04345 Chorismate lyase BA894_14970 PF03748 Flagellar basal body-associated protein FliL BA894_14975 PF01694 Rhomboid family BA894_14975 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease BA894_14980 PF00581 Rhodanese-like domain BA894_14985 PF00140 Sigma-70 factor, region 1.2 BA894_14985 PF04542 Sigma-70 region 2 BA894_14985 PF04545 Sigma-70, region 4 BA894_14990 PF18075 FtsX extracellular domain BA894_14995 PF00005 ABC transporter BA894_15000 PF00448 SRP54-type protein, GTPase domain BA894_15000 PF02881 SRP54-type protein, helical bundle domain BA894_15050 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BA894_15050 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BA894_15055 PF01022 Bacterial regulatory protein, arsR family BA894_15060 PF08668 HDOD domain BA894_15060 PF00563 EAL domain BA894_15065 PF01810 LysE type translocator BA894_15070 PF12146 Serine aminopeptidase, S33 BA894_15095 PF13419 Haloacid dehalogenase-like hydrolase BA894_15100 PF02899 Phage integrase, N-terminal SAM-like domain BA894_15100 PF00589 Phage integrase family BA894_15110 PF01678 Diaminopimelate epimerase BA894_15115 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BA894_15115 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BA894_15120 PF01491 Frataxin-like domain BA894_15125 PF01295 Adenylate cyclase, class-I BA894_15125 PF12633 Adenylate cyclase NT domain BA894_15130 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BA894_15130 PF03900 Porphobilinogen deaminase, C-terminal domain BA894_15135 PF02602 Uroporphyrinogen-III synthase HemD BA894_15140 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase BA894_15145 PF07219 HemY protein N-terminus BA894_15180 PF00175 Oxidoreductase NAD-binding domain BA894_15190 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase BA894_15200 PF07498 Rho termination factor, N-terminal domain BA894_15200 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BA894_15200 PF07497 Rho termination factor, RNA-binding domain BA894_15205 PF00085 Thioredoxin BA894_15210 PF00270 DEAD/DEAH box helicase BA894_15210 PF00271 Helicase conserved C-terminal domain BA894_15215 PF02541 Ppx/GppA phosphatase family BA894_15225 PF13333 Integrase core domain BA894_15225 PF00665 Integrase core domain BA894_15225 PF13276 HTH-like domain BA894_15230 PF02592 Putative vitamin uptake transporter BA894_15240 PF09382 RQC domain BA894_15240 PF00570 HRDC domain BA894_15240 PF00271 Helicase conserved C-terminal domain BA894_15240 PF00270 DEAD/DEAH box helicase BA894_15240 PF16124 RecQ zinc-binding BA894_15245 PF00892 EamA-like transporter family BA894_15255 PF01810 LysE type translocator BA894_15265 PF13361 UvrD-like helicase C-terminal domain BA894_15265 PF00580 UvrD/REP helicase N-terminal domain BA894_15275 PF05114 Protein of unknown function (DUF692) BA894_15295 PF07690 Major Facilitator Superfamily BA894_15300 PF03466 LysR substrate binding domain BA894_15300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_15305 PF01321 Creatinase/Prolidase N-terminal domain BA894_15305 PF00557 Metallopeptidase family M24 BA894_15305 PF01321 Creatinase/Prolidase N-terminal domain BA894_15305 PF00557 Metallopeptidase family M24 BA894_15310 PF06968 Biotin and Thiamin Synthesis associated domain BA894_15310 PF04055 Radical SAM superfamily BA894_15315 PF05690 Thiazole biosynthesis protein ThiG BA894_15320 PF02597 ThiS family BA894_15325 PF00899 ThiF family BA894_15330 PF02581 Thiamine monophosphate synthase BA894_15335 PF13667 ThiC-associated domain BA894_15335 PF01964 Radical SAM ThiC family BA894_15340 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BA894_15345 PF07732 Multicopper oxidase BA894_15345 PF07731 Multicopper oxidase BA894_15345 PF00394 Multicopper oxidase BA894_15395 PF00132 Bacterial transferase hexapeptide (six repeats) BA894_15405 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BA894_15405 PF01488 Shikimate / quinate 5-dehydrogenase BA894_15405 PF08501 Shikimate dehydrogenase substrate binding domain BA894_15410 PF01218 Coproporphyrinogen III oxidase BA894_15415 PF01300 Telomere recombination BA894_15420 PF00731 AIR carboxylase BA894_15425 PF02222 ATP-grasp domain BA894_15425 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BA894_15430 PF01396 Topoisomerase DNA binding C4 zinc finger BA894_15435 PF04361 Protein of unknown function (DUF494) BA894_15440 PF17782 DprA winged helix domain BA894_15440 PF02481 DNA recombination-mediator protein A BA894_15450 PF01327 Polypeptide deformylase BA894_15455 PF02911 Formyl transferase, C-terminal domain BA894_15455 PF00551 Formyl transferase BA894_15460 PF01189 16S rRNA methyltransferase RsmB/F BA894_15460 PF01029 NusB family BA894_15465 PF02080 TrkA-C domain BA894_15465 PF02254 TrkA-N domain BA894_15470 PF02386 Cation transport protein BA894_15480 PF03006 Haemolysin-III related BA894_15485 PF07070 SpoOM protein BA894_15490 PF06288 Protein of unknown function (DUF1040) BA894_15495 PF12801 4Fe-4S binding domain BA894_15495 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase BA894_15495 PF13746 4Fe-4S dicluster domain BA894_15500 PF01636 Phosphotransferase enzyme family BA894_15505 PF01323 DSBA-like thioredoxin domain BA894_15530 PF00892 EamA-like transporter family BA894_15535 PF09278 MerR, DNA binding BA894_15535 PF00376 MerR family regulatory protein BA894_15540 PF13411 MerR HTH family regulatory protein BA894_15545 PF02627 Carboxymuconolactone decarboxylase family BA894_15560 PF03781 Sulfatase-modifying factor enzyme 1 BA894_15580 PF00884 Sulfatase BA894_15585 PF02899 Phage integrase, N-terminal SAM-like domain BA894_15585 PF00589 Phage integrase family BA894_15595 PF01037 Lrp/AsnC ligand binding domain BA894_15600 PF03466 LysR substrate binding domain BA894_15600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_15620 PF00180 Isocitrate/isopropylmalate dehydrogenase BA894_15625 PF03401 Tripartite tricarboxylate transporter family receptor BA894_15635 PF01970 Tripartite tricarboxylate transporter TctA family BA894_15640 PF07005 Sugar-binding N-terminal domain BA894_15640 PF17042 Nucleotide-binding C-terminal domain BA894_15645 PF00596 Class II Aldolase and Adducin N-terminal domain BA894_15680 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BA894_15680 PF00205 Thiamine pyrophosphate enzyme, central domain BA894_15680 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BA894_15690 PF00920 Dehydratase family BA894_15695 PF00585 C-terminal regulatory domain of Threonine dehydratase BA894_15695 PF00291 Pyridoxal-phosphate dependent enzyme BA894_15700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_15700 PF03466 LysR substrate binding domain BA894_15705 PF07690 Major Facilitator Superfamily BA894_15710 PF00497 Bacterial extracellular solute-binding proteins, family 3 BA894_15715 PF00528 Binding-protein-dependent transport system inner membrane component BA894_15720 PF00132 Bacterial transferase hexapeptide (six repeats) BA894_15720 PF12804 MobA-like NTP transferase domain BA894_15725 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BA894_15725 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain BA894_15730 PF02874 ATP synthase alpha/beta family, beta-barrel domain BA894_15730 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BA894_15735 PF00231 ATP synthase BA894_15740 PF02874 ATP synthase alpha/beta family, beta-barrel domain BA894_15740 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BA894_15740 PF00306 ATP synthase alpha/beta chain, C terminal domain BA894_15745 PF00213 ATP synthase delta (OSCP) subunit BA894_15750 PF00430 ATP synthase B/B' CF(0) BA894_15755 PF00137 ATP synthase subunit C BA894_15760 PF00119 ATP synthase A chain BA894_15765 PF03899 ATP synthase I chain BA894_15770 PF17762 HTH domain found in ParB protein BA894_15770 PF02195 ParB-like nuclease domain BA894_15775 PF13614 AAA domain BA894_15780 PF02527 rRNA small subunit methyltransferase G BA894_15785 PF01134 Glucose inhibited division protein A BA894_15785 PF13932 GidA associated domain BA894_15795 PF00258 Flavodoxin BA894_15800 PF10396 GTP-binding protein TrmE N-terminus BA894_15800 PF12631 MnmE helical domain BA894_15800 PF01926 50S ribosome-binding GTPase BA894_15805 PF02096 60Kd inner membrane protein BA894_15805 PF14849 YidC periplasmic domain BA894_15810 PF00825 Ribonuclease P BA894_15815 PF00468 Ribosomal protein L34 BA894_15820 PF00005 ABC transporter BA894_15825 PF00528 Binding-protein-dependent transport system inner membrane component BA894_15830 PF00497 Bacterial extracellular solute-binding proteins, family 3 BA894_15835 PF01494 FAD binding domain BA894_15840 PF02056 Family 4 glycosyl hydrolase BA894_15840 PF11975 Family 4 glycosyl hydrolase C-terminal domain BA894_15845 PF07702 UTRA domain BA894_15845 PF00392 Bacterial regulatory proteins, gntR family BA894_15850 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BA894_15860 PF04909 Amidohydrolase BA894_15865 PF04303 PrpF protein BA894_15870 PF03737 Aldolase/RraA BA894_15875 PF04909 Amidohydrolase BA894_15880 PF08501 Shikimate dehydrogenase substrate binding domain BA894_15880 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BA894_15885 PF01220 Dehydroquinase class II BA894_15890 PF01261 Xylose isomerase-like TIM barrel BA894_15900 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BA894_15910 PF03480 Bacterial extracellular solute-binding protein, family 7 BA894_15915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_15915 PF03466 LysR substrate binding domain BA894_15925 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BA894_15930 PF00248 Aldo/keto reductase family BA894_15935 PF00912 Transglycosylase BA894_15935 PF00905 Penicillin binding protein transpeptidase domain BA894_15935 PF14814 Bifunctional transglycosylase second domain BA894_15945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_15945 PF03466 LysR substrate binding domain BA894_15960 PF08943 CsiD BA894_15965 PF01266 FAD dependent oxidoreductase BA894_15970 PF03466 LysR substrate binding domain BA894_15970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_15985 PF10114 Sensory domain found in PocR BA894_15985 PF12833 Helix-turn-helix domain BA894_15990 PF07722 Peptidase C26 BA894_16005 PF02423 Ornithine cyclodeaminase/mu-crystallin family BA894_16015 PF03606 C4-dicarboxylate anaerobic carrier BA894_16020 PF01546 Peptidase family M20/M25/M40 BA894_16020 PF07687 Peptidase dimerisation domain BA894_16025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_16025 PF03466 LysR substrate binding domain BA894_16030 PF07690 Major Facilitator Superfamily BA894_16035 PF00106 short chain dehydrogenase BA894_16040 PF00175 Oxidoreductase NAD-binding domain BA894_16040 PF00970 Oxidoreductase FAD-binding domain BA894_16040 PF00111 2Fe-2S iron-sulfur cluster binding domain BA894_16045 PF00866 Ring hydroxylating beta subunit BA894_16050 PF00355 Rieske [2Fe-2S] domain BA894_16050 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BA894_16055 PF00775 Dioxygenase BA894_16055 PF04444 Catechol dioxygenase N terminus BA894_16060 PF02426 Muconolactone delta-isomerase BA894_16065 PF13378 Enolase C-terminal domain-like BA894_16065 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BA894_16070 PF03466 LysR substrate binding domain BA894_16070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_16075 PF01144 Coenzyme A transferase BA894_16080 PF01144 Coenzyme A transferase BA894_16085 PF02803 Thiolase, C-terminal domain BA894_16085 PF00108 Thiolase, N-terminal domain BA894_16090 PF12146 Serine aminopeptidase, S33 BA894_16095 PF09339 IclR helix-turn-helix domain BA894_16095 PF01614 Bacterial transcriptional regulator BA894_16100 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain BA894_16110 PF07969 Amidohydrolase family BA894_16120 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BA894_16120 PF02837 Glycosyl hydrolases family 2, sugar binding domain BA894_16120 PF00703 Glycosyl hydrolases family 2 BA894_16125 PF03786 D-mannonate dehydratase (UxuA) BA894_16130 PF00392 Bacterial regulatory proteins, gntR family BA894_16130 PF07729 FCD domain BA894_16135 PF03480 Bacterial extracellular solute-binding protein, family 7 BA894_16140 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component BA894_16145 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BA894_16150 PF08125 Mannitol dehydrogenase C-terminal domain BA894_16150 PF01232 Mannitol dehydrogenase Rossmann domain BA894_16155 PF02614 Glucuronate isomerase BA894_16160 PF00294 pfkB family carbohydrate kinase BA894_16165 PF01081 KDPG and KHG aldolase BA894_16170 PF10688 Bacterial inner membrane protein BA894_16175 PF00933 Glycosyl hydrolase family 3 N terminal domain BA894_16180 PF04074 YhcH/YjgK/YiaL BA894_16195 PF00478 IMP dehydrogenase / GMP reductase domain BA894_16200 PF03853 YjeF-related protein N-terminus BA894_16200 PF01256 Carbohydrate kinase BA894_16205 PF00248 Aldo/keto reductase family BA894_16220 PF00654 Voltage gated chloride channel BA894_16230 PF01227 GTP cyclohydrolase I BA894_16235 PF00994 Probable molybdopterin binding domain BA894_16235 PF03454 MoeA C-terminal region (domain IV) BA894_16235 PF03453 MoeA N-terminal region (domain I and II) BA894_16240 PF00899 ThiF family BA894_16250 PF00581 Rhodanese-like domain BA894_16260 PF16868 NMT1-like family BA894_16270 PF00923 Transaldolase/Fructose-6-phosphate aldolase BA894_16275 PF02779 Transketolase, pyrimidine binding domain BA894_16275 PF00456 Transketolase, thiamine diphosphate binding domain BA894_16275 PF02780 Transketolase, C-terminal domain BA894_16280 PF08447 PAS fold BA894_16280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA894_16285 PF00793 DAHP synthetase I family BA894_16290 PF00691 OmpA family BA894_16290 PF01389 OmpA-like transmembrane domain BA894_16295 PF13419 Haloacid dehalogenase-like hydrolase BA894_16300 PF00472 RF-1 domain BA894_16305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA894_16305 PF12729 Four helix bundle sensory module for signal transduction BA894_16305 PF00672 HAMP domain BA894_16310 PF00873 AcrB/AcrD/AcrF family BA894_16315 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BA894_16320 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BA894_16325 PF01546 Peptidase family M20/M25/M40 BA894_16325 PF07687 Peptidase dimerisation domain BA894_16340 PF00072 Response regulator receiver domain BA894_16340 PF00196 Bacterial regulatory proteins, luxR family BA894_16345 PF00672 HAMP domain BA894_16345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA894_16345 PF07730 Histidine kinase BA894_16345 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term BA894_16350 PF12838 4Fe-4S dicluster domain BA894_16350 PF13187 4Fe-4S dicluster domain BA894_16360 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BA894_16360 PF00384 Molybdopterin oxidoreductase BA894_16360 PF01568 Molydopterin dinucleotide binding domain BA894_16365 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) BA894_16370 PF03264 NapC/NirT cytochrome c family, N-terminal region BA894_16380 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus BA894_16380 PF00561 alpha/beta hydrolase fold BA894_16390 PF02803 Thiolase, C-terminal domain BA894_16390 PF00108 Thiolase, N-terminal domain BA894_16395 PF00106 short chain dehydrogenase BA894_16400 PF01810 LysE type translocator BA894_16405 PF07549 SecD/SecF GG Motif BA894_16405 PF02355 Protein export membrane protein BA894_16410 PF07549 SecD/SecF GG Motif BA894_16410 PF02355 Protein export membrane protein BA894_16410 PF13721 SecD export protein N-terminal TM region BA894_16430 PF01037 Lrp/AsnC ligand binding domain BA894_16450 PF00529 HlyD membrane-fusion protein of T1SS BA894_16450 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BA894_16460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA894_16460 PF00072 Response regulator receiver domain BA894_16460 PF00512 His Kinase A (phospho-acceptor) domain BA894_16460 PF09308 LuxQ, periplasmic BA894_16465 PF13407 Periplasmic binding protein domain BA894_16470 PF01541 GIY-YIG catalytic domain BA894_16475 PF04337 Protein of unknown function, DUF480 BA894_16485 PF04363 Protein of unknown function (DUF496) BA894_16490 PF01554 MatE BA894_16495 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BA894_16500 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BA894_16500 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BA894_16515 PF03466 LysR substrate binding domain BA894_16515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_16520 PF01037 Lrp/AsnC ligand binding domain BA894_16520 PF13404 AsnC-type helix-turn-helix domain BA894_16525 PF13520 Amino acid permease BA894_16530 PF00392 Bacterial regulatory proteins, gntR family BA894_16530 PF00155 Aminotransferase class I and II BA894_16540 PF03109 ABC1 family BA894_16545 PF00571 CBS domain BA894_16545 PF01769 Divalent cation transporter BA894_16545 PF03448 MgtE intracellular N domain BA894_16550 PF01966 HD domain BA894_16570 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BA894_16575 PF00255 Glutathione peroxidase BA894_16585 PF01323 DSBA-like thioredoxin domain BA894_16600 PF01219 Prokaryotic diacylglycerol kinase BA894_16605 PF08019 Phosphoethanolamine transferase EptA/EptB BA894_16605 PF00884 Sulfatase BA894_16610 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BA894_16615 PF03733 Inner membrane component domain BA894_16620 PF01047 MarR family BA894_16630 PF01734 Patatin-like phospholipase BA894_16635 PF05726 Pirin C-terminal cupin domain BA894_16635 PF02678 Pirin BA894_16640 PF00313 'Cold-shock' DNA-binding domain BA894_16655 PF00962 Adenosine/AMP deaminase BA894_16660 PF00462 Glutaredoxin BA894_16660 PF08534 Redoxin BA894_16670 PF02798 Glutathione S-transferase, N-terminal domain BA894_16700 PF03099 Biotin/lipoate A/B protein ligase family BA894_16710 PF00271 Helicase conserved C-terminal domain BA894_16710 PF00270 DEAD/DEAH box helicase BA894_16720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_16720 PF03466 LysR substrate binding domain BA894_16725 PF08240 Alcohol dehydrogenase GroES-like domain BA894_16725 PF00107 Zinc-binding dehydrogenase BA894_16745 PF00232 Glycosyl hydrolase family 1 BA894_16750 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BA894_16750 PF02378 Phosphotransferase system, EIIC BA894_16750 PF00367 phosphotransferase system, EIIB BA894_16755 PF00232 Glycosyl hydrolase family 1 BA894_16760 PF13419 Haloacid dehalogenase-like hydrolase BA894_16765 PF00356 Bacterial regulatory proteins, lacI family BA894_16770 PF00557 Metallopeptidase family M24 BA894_16770 PF01321 Creatinase/Prolidase N-terminal domain BA894_16775 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family BA894_16780 PF01037 Lrp/AsnC ligand binding domain BA894_16785 PF00171 Aldehyde dehydrogenase family BA894_16790 PF00202 Aminotransferase class-III BA894_16795 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) BA894_16800 PF17392 Urocanase C-terminal domain BA894_16800 PF17391 Urocanase N-terminal domain BA894_16800 PF01175 Urocanase Rossmann-like domain BA894_16805 PF00221 Aromatic amino acid lyase BA894_16810 PF03466 LysR substrate binding domain BA894_16810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_16835 PF00486 Transcriptional regulatory protein, C terminal BA894_16835 PF00072 Response regulator receiver domain BA894_16840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA894_16840 PF00512 His Kinase A (phospho-acceptor) domain BA894_16840 PF00672 HAMP domain BA894_16845 PF03358 NADPH-dependent FMN reductase BA894_16850 PF00440 Bacterial regulatory proteins, tetR family BA894_16850 PF08362 YcdC-like protein, C-terminal region BA894_16855 PF01799 [2Fe-2S] binding domain BA894_16855 PF00111 2Fe-2S iron-sulfur cluster binding domain BA894_16875 PF00576 HIUase/Transthyretin family BA894_16885 PF00860 Permease family BA894_16895 PF00497 Bacterial extracellular solute-binding proteins, family 3 BA894_16900 PF00155 Aminotransferase class I and II BA894_16905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_16905 PF03466 LysR substrate binding domain BA894_16915 PF00313 'Cold-shock' DNA-binding domain BA894_16920 PF08206 Ribonuclease B OB domain BA894_16920 PF00773 RNB domain BA894_16920 PF00575 S1 RNA binding domain BA894_16920 PF17876 Cold shock domain BA894_16920 PF08461 Ribonuclease R winged-helix domain BA894_16925 PF02056 Family 4 glycosyl hydrolase BA894_16925 PF11975 Family 4 glycosyl hydrolase C-terminal domain BA894_16930 PF00367 phosphotransferase system, EIIB BA894_16930 PF02378 Phosphotransferase system, EIIC BA894_16935 PF07702 UTRA domain BA894_16935 PF00392 Bacterial regulatory proteins, gntR family BA894_16945 PF00892 EamA-like transporter family BA894_16955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_16955 PF03466 LysR substrate binding domain BA894_16960 PF07690 Major Facilitator Superfamily BA894_16965 PF00072 Response regulator receiver domain BA894_16965 PF00196 Bacterial regulatory proteins, luxR family BA894_16970 PF00989 PAS fold BA894_16970 PF00512 His Kinase A (phospho-acceptor) domain BA894_16970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA894_16975 PF13193 AMP-binding enzyme C-terminal domain BA894_16975 PF00501 AMP-binding enzyme BA894_16985 PF03466 LysR substrate binding domain BA894_16985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_16995 PF03618 Kinase/pyrophosphorylase BA894_17000 PF02896 PEP-utilising enzyme, TIM barrel domain BA894_17000 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BA894_17000 PF00391 PEP-utilising enzyme, mobile domain BA894_17010 PF00196 Bacterial regulatory proteins, luxR family BA894_17015 PF00579 tRNA synthetases class I (W and Y) BA894_17020 PF13416 Bacterial extracellular solute-binding protein BA894_17025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_17025 PF03466 LysR substrate binding domain BA894_17035 PF00873 AcrB/AcrD/AcrF family BA894_17050 PF02028 BCCT, betaine/carnitine/choline family transporter BA894_17055 PF07702 UTRA domain BA894_17055 PF00392 Bacterial regulatory proteins, gntR family BA894_17080 PF08402 TOBE domain BA894_17080 PF00005 ABC transporter BA894_17095 PF00873 AcrB/AcrD/AcrF family BA894_17100 PF00529 HlyD membrane-fusion protein of T1SS BA894_17100 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BA894_17105 PF13091 PLD-like domain BA894_17125 PF09278 MerR, DNA binding BA894_17125 PF00376 MerR family regulatory protein BA894_17135 PF11471 Maltoporin periplasmic N-terminal extension BA894_17135 PF02264 LamB porin BA894_17140 PF03764 Elongation factor G, domain IV BA894_17140 PF00009 Elongation factor Tu GTP binding domain BA894_17140 PF03144 Elongation factor Tu domain 2 BA894_17140 PF14492 Elongation Factor G, domain II BA894_17140 PF00679 Elongation factor G C-terminus BA894_17160 PF02001 Protein of unknown function DUF134 BA894_17165 PF04170 NlpE N-terminal domain BA894_17165 PF17185 NlpE C-terminal OB domain BA894_17170 PF03466 LysR substrate binding domain BA894_17170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_17175 PF00892 EamA-like transporter family BA894_17190 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BA894_17190 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BA894_17200 PF00857 Isochorismatase family BA894_17210 PF01641 SelR domain BA894_17210 PF01625 Peptide methionine sulfoxide reductase BA894_17215 PF13520 Amino acid permease BA894_17220 PF05985 Ethanolamine ammonia-lyase light chain (EutC) BA894_17225 PF06751 Ethanolamine ammonia lyase large subunit (EutB) BA894_17230 PF12833 Helix-turn-helix domain BA894_17240 PF03466 LysR substrate binding domain BA894_17240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_17245 PF01810 LysE type translocator BA894_17250 PF00118 TCP-1/cpn60 chaperonin family BA894_17255 PF00166 Chaperonin 10 Kd subunit BA894_17260 PF00581 Rhodanese-like domain BA894_17285 PF01070 FMN-dependent dehydrogenase BA894_17305 PF00133 tRNA synthetases class I (I, L, M and V) BA894_17305 PF08264 Anticodon-binding domain of tRNA BA894_17325 PF03313 Serine dehydratase alpha chain BA894_17325 PF03315 Serine dehydratase beta chain BA894_17330 PF03466 LysR substrate binding domain BA894_17330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_17335 PF01389 OmpA-like transmembrane domain BA894_17335 PF00691 OmpA family BA894_17340 PF00246 Zinc carboxypeptidase BA894_17340 PF18027 Cytosolic carboxypeptidase N-terminal domain BA894_17345 PF01266 FAD dependent oxidoreductase BA894_17355 PF07702 UTRA domain BA894_17355 PF00392 Bacterial regulatory proteins, gntR family BA894_17360 PF00528 Binding-protein-dependent transport system inner membrane component BA894_17365 PF00005 ABC transporter BA894_17380 PF00266 Aminotransferase class-V BA894_17390 PF13419 Haloacid dehalogenase-like hydrolase BA894_17405 PF00657 GDSL-like Lipase/Acylhydrolase BA894_17410 PF02321 Outer membrane efflux protein BA894_17415 PF02687 FtsX-like permease family BA894_17415 PF12704 MacB-like periplasmic core domain BA894_17415 PF00005 ABC transporter BA894_17420 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BA894_17435 PF13419 Haloacid dehalogenase-like hydrolase BA894_17440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_17440 PF03466 LysR substrate binding domain BA894_17455 PF05656 Protein of unknown function (DUF805) BA894_17460 PF14602 Hexapeptide repeat of succinyl-transferase BA894_17460 PF12464 Maltose acetyltransferase BA894_17465 PF02566 OsmC-like protein BA894_17470 PF01625 Peptide methionine sulfoxide reductase BA894_17470 PF01641 SelR domain BA894_17480 PF04244 Deoxyribodipyrimidine photo-lyase-related protein BA894_17485 PF00990 Diguanylate cyclase, GGDEF domain BA894_17500 PF00990 Diguanylate cyclase, GGDEF domain BA894_17500 PF00563 EAL domain BA894_17500 PF03707 Bacterial signalling protein N terminal repeat BA894_17515 PF07662 Na+ dependent nucleoside transporter C-terminus BA894_17515 PF01773 Na+ dependent nucleoside transporter N-terminus BA894_17515 PF07670 Nucleoside recognition BA894_17530 PF01266 FAD dependent oxidoreductase BA894_17535 PF05525 Branched-chain amino acid transport protein BA894_17540 PF00990 Diguanylate cyclase, GGDEF domain BA894_17560 PF18030 RimK PreATP-grasp domain BA894_17560 PF08443 RimK-like ATP-grasp domain BA894_17565 PF08443 RimK-like ATP-grasp domain BA894_17565 PF18030 RimK PreATP-grasp domain BA894_17570 PF00753 Metallo-beta-lactamase superfamily BA894_17575 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BA894_17575 PF17944 Arginine decarboxylase C-terminal helical extension BA894_17575 PF17810 Arginine decarboxylase helical bundle domain BA894_17580 PF00491 Arginase family BA894_17585 PF07690 Major Facilitator Superfamily BA894_17590 PF00326 Prolyl oligopeptidase family BA894_17590 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BA894_17610 PF02472 Biopolymer transport protein ExbD/TolR BA894_17615 PF01618 MotA/TolQ/ExbB proton channel family BA894_17620 PF01618 MotA/TolQ/ExbB proton channel family BA894_17630 PF00593 TonB dependent receptor BA894_17630 PF07715 TonB-dependent Receptor Plug Domain BA894_17635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA894_17635 PF00672 HAMP domain BA894_17635 PF16750 Sensor domain of 2-component histidine kinase BA894_17635 PF00512 His Kinase A (phospho-acceptor) domain BA894_17640 PF00072 Response regulator receiver domain BA894_17640 PF00486 Transcriptional regulatory protein, C terminal BA894_17650 PF03009 Glycerophosphoryl diester phosphodiesterase family BA894_17660 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BA894_17660 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BA894_17665 PF10928 Protein of unknown function (DUF2810) BA894_17725 PF04013 Putative SAM-dependent RNA methyltransferase BA894_17730 PF01523 Putative modulator of DNA gyrase BA894_17735 PF01523 Putative modulator of DNA gyrase BA894_17740 PF08543 Phosphomethylpyrimidine kinase BA894_17745 PF00005 ABC transporter BA894_17750 PF00528 Binding-protein-dependent transport system inner membrane component BA894_17755 PF09084 NMT1/THI5 like BA894_17760 PF03070 TENA/THI-4/PQQC family BA894_17765 PF02110 Hydroxyethylthiazole kinase family BA894_17770 PF02581 Thiamine monophosphate synthase BA894_17780 PF01568 Molydopterin dinucleotide binding domain BA894_17780 PF00384 Molybdopterin oxidoreductase BA894_17780 PF18364 Molybdopterin oxidoreductase N-terminal domain BA894_17785 PF03264 NapC/NirT cytochrome c family, N-terminal region BA894_17800 PF02595 Glycerate kinase family BA894_17805 PF02447 GntP family permease BA894_17810 PF13556 PucR C-terminal helix-turn-helix domain BA894_17810 PF05651 Putative sugar diacid recognition BA894_17810 PF17853 GGDEF-like domain BA894_17835 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BA894_17840 PF01661 Macro domain BA894_17845 PF12706 Beta-lactamase superfamily domain BA894_17855 PF03922 OmpW family BA894_17870 PF01037 Lrp/AsnC ligand binding domain BA894_17875 PF01810 LysE type translocator BA894_17880 PF08021 Siderophore-interacting FAD-binding domain BA894_17880 PF04954 Siderophore-interacting protein BA894_17885 PF01081 KDPG and KHG aldolase BA894_17890 PF00294 pfkB family carbohydrate kinase BA894_17900 PF10688 Bacterial inner membrane protein BA894_17910 PF01614 Bacterial transcriptional regulator BA894_17910 PF09339 IclR helix-turn-helix domain BA894_17915 PF03466 LysR substrate binding domain BA894_17915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_17925 PF00596 Class II Aldolase and Adducin N-terminal domain BA894_17930 PF08240 Alcohol dehydrogenase GroES-like domain BA894_17930 PF00107 Zinc-binding dehydrogenase BA894_17935 PF00756 Putative esterase BA894_17945 PF17152 Periplasmic sensor domain BA894_17945 PF00990 Diguanylate cyclase, GGDEF domain BA894_17955 PF00849 RNA pseudouridylate synthase BA894_17960 PF01554 MatE BA894_17965 PF00990 Diguanylate cyclase, GGDEF domain BA894_17965 PF00563 EAL domain BA894_17975 PF06865 Pyrimidine/purine nucleoside phosphorylase BA894_17980 PF08329 Chitinase A, N-terminal domain BA894_17980 PF00704 Glycosyl hydrolases family 18 BA894_18000 PF03600 Citrate transporter BA894_18015 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BA894_18020 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BA894_18020 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BA894_18025 PF06029 AlkA N-terminal domain BA894_18025 PF00730 HhH-GPD superfamily base excision DNA repair protein BA894_18035 PF07681 DoxX BA894_18040 PF02678 Pirin BA894_18040 PF17954 Quercetinase C-terminal cupin domain BA894_18045 PF03466 LysR substrate binding domain BA894_18045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_18060 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BA894_18075 PF00005 ABC transporter BA894_18085 PF03616 Sodium/glutamate symporter BA894_18095 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BA894_18100 PF04397 LytTr DNA-binding domain BA894_18100 PF00072 Response regulator receiver domain BA894_18105 PF13492 GAF domain BA894_18105 PF07694 5TMR of 5TMR-LYT BA894_18105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA894_18105 PF06580 Histidine kinase BA894_18120 PF02687 FtsX-like permease family BA894_18120 PF12704 MacB-like periplasmic core domain BA894_18125 PF00005 ABC transporter BA894_18135 PF01709 Transcriptional regulator BA894_18150 PF00005 ABC transporter BA894_18150 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA894_18155 PF00005 ABC transporter BA894_18155 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA894_18175 PF08775 ParB family BA894_18175 PF02195 ParB-like nuclease domain BA894_18180 PF13718 GNAT acetyltransferase 2 BA894_18180 PF05127 Helicase BA894_18190 PF00246 Zinc carboxypeptidase BA894_18195 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA894_18205 PF03412 Peptidase C39 family BA894_18205 PF00005 ABC transporter BA894_18205 PF00664 ABC transporter transmembrane region BA894_18220 PF00529 HlyD membrane-fusion protein of T1SS BA894_18225 PF00158 Sigma-54 interaction domain BA894_18225 PF00072 Response regulator receiver domain BA894_18225 PF02954 Bacterial regulatory protein, Fis family BA894_18230 PF00512 His Kinase A (phospho-acceptor) domain BA894_18230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA894_18230 PF02743 Cache domain BA894_18235 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region BA894_18235 PF01243 Pyridoxamine 5'-phosphate oxidase BA894_18250 PF12833 Helix-turn-helix domain BA894_18255 PF00171 Aldehyde dehydrogenase family BA894_18255 PF14850 DNA-binding domain of Proline dehydrogenase BA894_18255 PF18327 Proline utilization A proline dehydrogenase N-terminal domain BA894_18255 PF01619 Proline dehydrogenase BA894_18265 PF00474 Sodium:solute symporter family BA894_18275 PF01037 Lrp/AsnC ligand binding domain BA894_18295 PF00884 Sulfatase BA894_18295 PF16385 Domain of unknown function BA894_18300 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA894_18300 PF13192 Thioredoxin domain BA894_18305 PF00578 AhpC/TSA family BA894_18305 PF10417 C-terminal domain of 1-Cys peroxiredoxin BA894_18310 PF01047 MarR family BA894_18315 PF02566 OsmC-like protein BA894_18335 PF00005 ABC transporter BA894_18340 PF00106 short chain dehydrogenase BA894_18350 PF00155 Aminotransferase class I and II BA894_18350 PF00392 Bacterial regulatory proteins, gntR family BA894_18355 PF00202 Aminotransferase class-III BA894_18360 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BA894_18365 PF00005 ABC transporter BA894_18370 PF00528 Binding-protein-dependent transport system inner membrane component BA894_18385 PF04616 Glycosyl hydrolases family 43 BA894_18385 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain BA894_18390 PF01263 Aldose 1-epimerase BA894_18395 PF12833 Helix-turn-helix domain BA894_18395 PF02311 AraC-like ligand binding domain BA894_18400 PF11762 L-arabinose isomerase C-terminal domain BA894_18400 PF02610 L-arabinose isomerase BA894_18405 PF00596 Class II Aldolase and Adducin N-terminal domain BA894_18410 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BA894_18410 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BA894_18415 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BA894_18420 PF00005 ABC transporter BA894_18425 PF02653 Branched-chain amino acid transport system / permease component BA894_18435 PF07660 Secretin and TonB N terminus short domain BA894_18435 PF00593 TonB dependent receptor BA894_18435 PF07715 TonB-dependent Receptor Plug Domain BA894_18440 PF01497 Periplasmic binding protein BA894_18445 PF00884 Sulfatase BA894_18445 PF16385 Domain of unknown function BA894_18450 PF00884 Sulfatase BA894_18455 PF04055 Radical SAM superfamily BA894_18455 PF13186 Iron-sulfur cluster-binding domain BA894_18465 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA894_18470 PF00528 Binding-protein-dependent transport system inner membrane component BA894_18475 PF12911 N-terminal TM domain of oligopeptide transport permease C BA894_18475 PF00528 Binding-protein-dependent transport system inner membrane component BA894_18480 PF00005 ABC transporter BA894_18480 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA894_18485 PF12729 Four helix bundle sensory module for signal transduction BA894_18485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA894_18485 PF00672 HAMP domain BA894_18490 PF00480 ROK family BA894_18495 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BA894_18495 PF16353 Domain of unknown function(DUF4981) BA894_18495 PF00703 Glycosyl hydrolases family 2 BA894_18495 PF02837 Glycosyl hydrolases family 2, sugar binding domain BA894_18495 PF02929 Beta galactosidase small chain BA894_18500 PF01740 STAS domain BA894_18500 PF00916 Sulfate permease family BA894_18505 PF01370 NAD dependent epimerase/dehydratase family BA894_18510 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain BA894_18510 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain BA894_18515 PF07470 Glycosyl Hydrolase Family 88 BA894_18520 PF17386 Lacto-N-biose phosphorylase C-terminal domain BA894_18520 PF09508 Lacto-N-biose phosphorylase N-terminal TIM barrel domain BA894_18520 PF17385 Lacto-N-biose phosphorylase central domain BA894_18525 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain BA894_18525 PF02278 Polysaccharide lyase family 8, super-sandwich domain BA894_18525 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain BA894_18530 PF05193 Peptidase M16 inactive domain BA894_18530 PF00675 Insulinase (Peptidase family M16) BA894_18540 PF00141 Peroxidase BA894_18545 PF02435 Levansucrase/Invertase BA894_18550 PF08244 Glycosyl hydrolases family 32 C terminal BA894_18550 PF00251 Glycosyl hydrolases family 32 N-terminal domain BA894_18580 PF02311 AraC-like ligand binding domain BA894_18580 PF12833 Helix-turn-helix domain BA894_18585 PF02423 Ornithine cyclodeaminase/mu-crystallin family BA894_18590 PF01042 Endoribonuclease L-PSP BA894_18595 PF01266 FAD dependent oxidoreductase BA894_18610 PF00474 Sodium:solute symporter family BA894_18615 PF06339 Ectoine synthase BA894_18620 PF03466 LysR substrate binding domain BA894_18620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_18625 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BA894_18625 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BA894_18630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_18630 PF03466 LysR substrate binding domain BA894_18635 PF00202 Aminotransferase class-III BA894_18640 PF00171 Aldehyde dehydrogenase family BA894_18650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_18650 PF03466 LysR substrate binding domain BA894_18655 PF00893 Small Multidrug Resistance protein BA894_18670 PF04320 Protein with unknown function (DUF469) BA894_18685 PF03222 Tryptophan/tyrosine permease family BA894_18690 PF01212 Beta-eliminating lyase BA894_18695 PF13533 Biotin-lipoyl like BA894_18705 PF08360 QacR-like protein, C-terminal region BA894_18705 PF00440 Bacterial regulatory proteins, tetR family BA894_18710 PF00005 ABC transporter BA894_18715 PF01032 FecCD transport family BA894_18720 PF01032 FecCD transport family BA894_18725 PF01497 Periplasmic binding protein BA894_18730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_18730 PF03466 LysR substrate binding domain BA894_18735 PF00593 TonB dependent receptor BA894_18735 PF07715 TonB-dependent Receptor Plug Domain BA894_18740 PF07690 Major Facilitator Superfamily BA894_18750 PF00367 phosphotransferase system, EIIB BA894_18750 PF02378 Phosphotransferase system, EIIC BA894_18755 PF00356 Bacterial regulatory proteins, lacI family BA894_18760 PF00128 Alpha amylase, catalytic domain BA894_18760 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BA894_18765 PF02264 LamB porin BA894_18770 PF07148 Maltose operon periplasmic protein precursor (MalM) BA894_18780 PF00128 Alpha amylase, catalytic domain BA894_18780 PF02903 Alpha amylase, N-terminal ig-like domain BA894_18785 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BA894_18785 PF11852 Domain of unknown function (DUF3372) BA894_18785 PF03714 Bacterial pullanase-associated domain BA894_18785 PF18494 Pullulanase Ins domain BA894_18785 PF17967 Pullulanase N2 domain BA894_18795 PF08543 Phosphomethylpyrimidine kinase BA894_18800 PF00375 Sodium:dicarboxylate symporter family BA894_18805 PF03193 RsgA GTPase BA894_18810 PF02378 Phosphotransferase system, EIIC BA894_18810 PF00367 phosphotransferase system, EIIB BA894_18815 PF02630 SCO1/SenC BA894_18830 PF17874 MalT-like TPR region BA894_18830 PF00196 Bacterial regulatory proteins, luxR family BA894_18835 PF00343 Carbohydrate phosphorylase BA894_18840 PF02446 4-alpha-glucanotransferase BA894_18845 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BA894_18845 PF02806 Alpha amylase, C-terminal all-beta domain BA894_18845 PF00128 Alpha amylase, catalytic domain BA894_18850 PF00912 Transglycosylase BA894_18855 PF00128 Alpha amylase, catalytic domain BA894_18860 PF07670 Nucleoside recognition BA894_18865 PF07670 Nucleoside recognition BA894_18870 PF01546 Peptidase family M20/M25/M40 BA894_18870 PF07687 Peptidase dimerisation domain BA894_18875 PF06803 Protein of unknown function (DUF1232) BA894_18880 PF00375 Sodium:dicarboxylate symporter family BA894_18890 PF00881 Nitroreductase family BA894_18895 PF01914 MarC family integral membrane protein BA894_18900 PF01734 Patatin-like phospholipase BA894_18915 PF00561 alpha/beta hydrolase fold BA894_18920 PF07943 Penicillin-binding protein 5, C-terminal domain BA894_18920 PF00768 D-alanyl-D-alanine carboxypeptidase BA894_18925 PF09905 DNA-binding protein VF530 BA894_18935 PF00970 Oxidoreductase FAD-binding domain BA894_18935 PF00175 Oxidoreductase NAD-binding domain BA894_18940 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) BA894_18945 PF01594 AI-2E family transporter BA894_18955 PF13533 Biotin-lipoyl like BA894_18965 PF02321 Outer membrane efflux protein BA894_18975 PF00892 EamA-like transporter family BA894_19000 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BA894_19005 PF03466 LysR substrate binding domain BA894_19005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_19020 PF00072 Response regulator receiver domain BA894_19020 PF00486 Transcriptional regulatory protein, C terminal BA894_19025 PF00512 His Kinase A (phospho-acceptor) domain BA894_19025 PF08448 PAS fold BA894_19025 PF13426 PAS domain BA894_19025 PF00072 Response regulator receiver domain BA894_19025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA894_19030 PF00080 Copper/zinc superoxide dismutase (SODC) BA894_19045 PF13188 PAS domain BA894_19045 PF03707 Bacterial signalling protein N terminal repeat BA894_19045 PF00990 Diguanylate cyclase, GGDEF domain BA894_19045 PF00563 EAL domain BA894_19050 PF00155 Aminotransferase class I and II BA894_19055 PF08240 Alcohol dehydrogenase GroES-like domain BA894_19055 PF00107 Zinc-binding dehydrogenase BA894_19065 PF00313 'Cold-shock' DNA-binding domain BA894_19075 PF00194 Eukaryotic-type carbonic anhydrase BA894_19080 PF00924 Mechanosensitive ion channel BA894_19090 PF01070 FMN-dependent dehydrogenase BA894_19095 PF02652 L-lactate permease BA894_19100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_19100 PF03466 LysR substrate binding domain BA894_19105 PF00326 Prolyl oligopeptidase family BA894_19105 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BA894_19115 PF13654 AAA domain BA894_19115 PF05362 Lon protease (S16) C-terminal proteolytic domain BA894_19120 PF12945 Flagellar protein YcgR BA894_19120 PF07238 PilZ domain BA894_19135 PF00583 Acetyltransferase (GNAT) family BA894_19140 PF12838 4Fe-4S dicluster domain BA894_19140 PF12800 4Fe-4S binding domain BA894_19145 PF12801 4Fe-4S binding domain BA894_19145 PF12837 4Fe-4S binding domain BA894_19155 PF07155 ECF-type riboflavin transporter, S component BA894_19160 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BA894_19160 PF00529 HlyD membrane-fusion protein of T1SS BA894_19165 PF11742 Protein of unknown function (DUF3302) BA894_19170 PF00990 Diguanylate cyclase, GGDEF domain BA894_19185 PF01048 Phosphorylase superfamily BA894_19190 PF08349 Protein of unknown function (DUF1722) BA894_19195 PF13411 MerR HTH family regulatory protein BA894_19200 PF00875 DNA photolyase BA894_19200 PF03441 FAD binding domain of DNA photolyase BA894_19205 PF01476 LysM domain BA894_19205 PF17969 L,D-transpeptidase C-terminal domain BA894_19205 PF03734 L,D-transpeptidase catalytic domain BA894_19215 PF00271 Helicase conserved C-terminal domain BA894_19215 PF00270 DEAD/DEAH box helicase BA894_19220 PF17200 Single Cache domain 2 BA894_19220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA894_19220 PF00672 HAMP domain BA894_19225 PF12849 PBP superfamily domain BA894_19230 PF00528 Binding-protein-dependent transport system inner membrane component BA894_19235 PF00528 Binding-protein-dependent transport system inner membrane component BA894_19240 PF00005 ABC transporter BA894_19250 PF13519 von Willebrand factor type A domain BA894_19265 PF01882 Protein of unknown function DUF58 BA894_19270 PF07726 ATPase family associated with various cellular activities (AAA) BA894_19270 PF17863 AAA lid domain BA894_19280 PF00196 Bacterial regulatory proteins, luxR family BA894_19285 PF00196 Bacterial regulatory proteins, luxR family BA894_19295 PF00005 ABC transporter BA894_19295 PF00664 ABC transporter transmembrane region BA894_19300 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BA894_19300 PF00529 HlyD membrane-fusion protein of T1SS BA894_19310 PF01032 FecCD transport family BA894_19315 PF01497 Periplasmic binding protein BA894_19320 PF00005 ABC transporter BA894_19325 PF00593 TonB dependent receptor BA894_19325 PF07715 TonB-dependent Receptor Plug Domain BA894_19330 PF00664 ABC transporter transmembrane region BA894_19330 PF00005 ABC transporter BA894_19335 PF03466 LysR substrate binding domain BA894_19335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_19340 PF02028 BCCT, betaine/carnitine/choline family transporter BA894_19345 PF00355 Rieske [2Fe-2S] domain BA894_19345 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BA894_19355 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA894_19355 PF18113 Rubredoxin binding C-terminal domain BA894_19360 PF01266 FAD dependent oxidoreductase BA894_19370 PF00127 Copper binding proteins, plastocyanin/azurin family BA894_19375 PF13419 Haloacid dehalogenase-like hydrolase BA894_19380 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BA894_19380 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BA894_19385 PF13417 Glutathione S-transferase, N-terminal domain BA894_19390 PF00107 Zinc-binding dehydrogenase BA894_19390 PF16884 N-terminal domain of oxidoreductase BA894_19395 PF00440 Bacterial regulatory proteins, tetR family BA894_19395 PF16925 Tetracyclin repressor-like, C-terminal domain BA894_19415 PF00534 Glycosyl transferases group 1 BA894_19415 PF13439 Glycosyltransferase Family 4 BA894_19430 PF13439 Glycosyltransferase Family 4 BA894_19430 PF00534 Glycosyl transferases group 1 BA894_19440 PF13614 AAA domain BA894_19440 PF13807 G-rich domain on putative tyrosine kinase BA894_19440 PF02706 Chain length determinant protein BA894_19455 PF02397 Bacterial sugar transferase BA894_19460 PF08402 TOBE domain BA894_19460 PF00005 ABC transporter BA894_19465 PF01547 Bacterial extracellular solute-binding protein BA894_19470 PF14785 Maltose transport system permease protein MalF P2 domain BA894_19470 PF00528 Binding-protein-dependent transport system inner membrane component BA894_19475 PF00528 Binding-protein-dependent transport system inner membrane component BA894_19495 PF00665 Integrase core domain BA894_19495 PF09299 Mu transposase, C-terminal BA894_19500 PF11426 Tn7 transposition regulator TnsC BA894_19500 PF13401 AAA domain BA894_19545 PF00990 Diguanylate cyclase, GGDEF domain BA894_19565 PF03707 Bacterial signalling protein N terminal repeat BA894_19565 PF00990 Diguanylate cyclase, GGDEF domain BA894_19565 PF00563 EAL domain BA894_19570 PF01389 OmpA-like transmembrane domain BA894_19570 PF00691 OmpA family BA894_19585 PF00664 ABC transporter transmembrane region BA894_19585 PF00005 ABC transporter BA894_19585 PF03412 Peptidase C39 family BA894_19590 PF00529 HlyD membrane-fusion protein of T1SS BA894_19590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BA894_19610 PF17676 LD-carboxypeptidase C-terminal domain BA894_19610 PF02016 LD-carboxypeptidase N-terminal domain BA894_19620 PF02371 Transposase IS116/IS110/IS902 family BA894_19620 PF01548 Transposase BA894_19625 PF13649 Methyltransferase domain BA894_19645 PF00902 Sec-independent protein translocase protein (TatC) BA894_19650 PF02416 mttA/Hcf106 family BA894_19655 PF02416 mttA/Hcf106 family BA894_19670 PF01266 FAD dependent oxidoreductase BA894_19700 PF00437 Type II/IV secretion system protein BA894_19705 PF04972 BON domain BA894_19705 PF00263 Bacterial type II and III secretion system protein BA894_19705 PF13629 Pilus formation protein N terminal region BA894_19730 PF08447 PAS fold BA894_19730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA894_19745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA894_19745 PF00512 His Kinase A (phospho-acceptor) domain BA894_19745 PF01627 Hpt domain BA894_19745 PF00072 Response regulator receiver domain BA894_19745 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BA894_19745 PF00672 HAMP domain BA894_19750 PF00072 Response regulator receiver domain BA894_19755 PF02028 BCCT, betaine/carnitine/choline family transporter BA894_19790 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain BA894_19790 PF01464 Transglycosylase SLT domain BA894_19800 PF01037 Lrp/AsnC ligand binding domain BA894_19810 PF00155 Aminotransferase class I and II BA894_19820 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term BA894_19820 PF12833 Helix-turn-helix domain BA894_19825 PF00743 Flavin-binding monooxygenase-like BA894_19835 PF00011 Hsp20/alpha crystallin family BA894_19850 PF03466 LysR substrate binding domain BA894_19850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_19855 PF12146 Serine aminopeptidase, S33 BA894_19860 PF12146 Serine aminopeptidase, S33 BA894_19870 PF00005 ABC transporter BA894_19870 PF00664 ABC transporter transmembrane region BA894_19885 PF14579 Helix-hairpin-helix motif BA894_19885 PF00929 Exonuclease BA894_19885 PF02811 PHP domain BA894_19885 PF11490 DNA polymerase III polC-type N-terminus II BA894_19885 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BA894_19885 PF07733 Bacterial DNA polymerase III alpha NTPase domain BA894_19895 PF05661 Protein of unknown function (DUF808) BA894_19900 PF01979 Amidohydrolase family BA894_19910 PF03476 MOSC N-terminal beta barrel domain BA894_19910 PF03473 MOSC domain BA894_19910 PF00111 2Fe-2S iron-sulfur cluster binding domain BA894_19910 PF03476 MOSC N-terminal beta barrel domain BA894_19910 PF03473 MOSC domain BA894_19910 PF00111 2Fe-2S iron-sulfur cluster binding domain BA894_19915 PF02540 NAD synthase BA894_19920 PF01467 Cytidylyltransferase-like BA894_19955 PF01243 Pyridoxamine 5'-phosphate oxidase BA894_19960 PF01584 CheW-like domain BA894_19960 PF00072 Response regulator receiver domain BA894_19970 PF01844 HNH endonuclease BA894_19985 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase BA894_19995 PF03466 LysR substrate binding domain BA894_19995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_20000 PF00107 Zinc-binding dehydrogenase BA894_20000 PF08240 Alcohol dehydrogenase GroES-like domain BA894_20005 PF03466 LysR substrate binding domain BA894_20005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_20010 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BA894_20025 PF01063 Amino-transferase class IV BA894_20030 PF13378 Enolase C-terminal domain-like BA894_20030 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BA894_20040 PF01168 Alanine racemase, N-terminal domain BA894_20040 PF00842 Alanine racemase, C-terminal domain BA894_20045 PF00999 Sodium/hydrogen exchanger family BA894_20065 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BA894_20075 PF03480 Bacterial extracellular solute-binding protein, family 7 BA894_20080 PF00171 Aldehyde dehydrogenase family BA894_20085 PF00202 Aminotransferase class-III BA894_20095 PF01717 Cobalamin-independent synthase, Catalytic domain BA894_20100 PF01266 FAD dependent oxidoreductase BA894_20105 PF00465 Iron-containing alcohol dehydrogenase BA894_20110 PF00128 Alpha amylase, catalytic domain BA894_20130 PF02254 TrkA-N domain BA894_20130 PF00999 Sodium/hydrogen exchanger family BA894_20135 PF02525 Flavodoxin-like fold BA894_20140 PF00455 DeoR C terminal sensor domain BA894_20140 PF08220 DeoR-like helix-turn-helix domain BA894_20145 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BA894_20150 PF17042 Nucleotide-binding C-terminal domain BA894_20150 PF07005 Sugar-binding N-terminal domain BA894_20155 PF00465 Iron-containing alcohol dehydrogenase BA894_20160 PF00701 Dihydrodipicolinate synthetase family BA894_20165 PF16868 NMT1-like family BA894_20180 PF04074 YhcH/YjgK/YiaL BA894_20190 PF00582 Universal stress protein family BA894_20195 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) BA894_20200 PF13302 Acetyltransferase (GNAT) domain BA894_20205 PF00990 Diguanylate cyclase, GGDEF domain BA894_20205 PF17158 Membrane-associated sensor, integral membrane domain BA894_20215 PF00175 Oxidoreductase NAD-binding domain BA894_20215 PF00111 2Fe-2S iron-sulfur cluster binding domain BA894_20215 PF00970 Oxidoreductase FAD-binding domain BA894_20225 PF00873 AcrB/AcrD/AcrF family BA894_20240 PF12838 4Fe-4S dicluster domain BA894_20240 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BA894_20240 PF00384 Molybdopterin oxidoreductase BA894_20240 PF01568 Molydopterin dinucleotide binding domain BA894_20240 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BA894_20250 PF00665 Integrase core domain BA894_20250 PF13276 HTH-like domain BA894_20250 PF13333 Integrase core domain BA894_20265 PF00005 ABC transporter BA894_20275 PF02567 Phenazine biosynthesis-like protein BA894_20280 PF01758 Sodium Bile acid symporter family BA894_20290 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA894_20310 PF03222 Tryptophan/tyrosine permease family BA894_20320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA894_20320 PF00672 HAMP domain BA894_20320 PF02743 Cache domain BA894_20345 PF01476 LysM domain BA894_20345 PF08525 Opacity-associated protein A N-terminal motif BA894_20345 PF01551 Peptidase family M23 BA894_20350 PF00990 Diguanylate cyclase, GGDEF domain BA894_20350 PF08447 PAS fold BA894_20350 PF00563 EAL domain BA894_20350 PF08448 PAS fold BA894_20355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_20355 PF03466 LysR substrate binding domain BA894_20375 PF01557 Fumarylacetoacetate (FAA) hydrolase family BA894_20395 PF01810 LysE type translocator BA894_20400 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BA894_20400 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BA894_20400 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BA894_20400 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BA894_20405 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BA894_20405 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BA894_20410 PF00115 Cytochrome C and Quinol oxidase polypeptide I BA894_20415 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 BA894_20420 PF00510 Cytochrome c oxidase subunit III BA894_20440 PF02628 Cytochrome oxidase assembly protein BA894_20445 PF01040 UbiA prenyltransferase family BA894_20450 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BA894_20450 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BA894_20460 PF05736 OprF membrane domain BA894_20460 PF00691 OmpA family BA894_20480 PF00313 'Cold-shock' DNA-binding domain BA894_20500 PF02687 FtsX-like permease family BA894_20500 PF00005 ABC transporter BA894_20500 PF12704 MacB-like periplasmic core domain BA894_20505 PF12704 MacB-like periplasmic core domain BA894_20505 PF02687 FtsX-like permease family BA894_20505 PF00005 ABC transporter BA894_20515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA894_20515 PF17200 Single Cache domain 2 BA894_20515 PF00672 HAMP domain BA894_20520 PF00210 Ferritin-like domain BA894_20530 PF07995 Glucose / Sorbosone dehydrogenase BA894_20535 PF00465 Iron-containing alcohol dehydrogenase BA894_20545 PF00892 EamA-like transporter family BA894_20555 PF03466 LysR substrate binding domain BA894_20555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_20565 PF13193 AMP-binding enzyme C-terminal domain BA894_20565 PF00501 AMP-binding enzyme BA894_20570 PF00351 Biopterin-dependent aromatic amino acid hydroxylase BA894_20575 PF01329 Pterin 4 alpha carbinolamine dehydratase BA894_20595 PF12843 Putative quorum-sensing-regulated virulence factor BA894_20600 PF00291 Pyridoxal-phosphate dependent enzyme BA894_20610 PF01470 Pyroglutamyl peptidase BA894_20615 PF02492 CobW/HypB/UreG, nucleotide-binding domain BA894_20615 PF07683 Cobalamin synthesis protein cobW C-terminal domain BA894_20620 PF00270 DEAD/DEAH box helicase BA894_20620 PF00271 Helicase conserved C-terminal domain BA894_20635 PF12792 CSS motif domain associated with EAL BA894_20635 PF00563 EAL domain BA894_20640 PF00005 ABC transporter BA894_20650 PF00296 Luciferase-like monooxygenase BA894_20660 PF03466 LysR substrate binding domain BA894_20660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_20665 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BA894_20665 PF00367 phosphotransferase system, EIIB BA894_20665 PF02378 Phosphotransferase system, EIIC BA894_20670 PF00232 Glycosyl hydrolase family 1 BA894_20675 PF11471 Maltoporin periplasmic N-terminal extension BA894_20675 PF02264 LamB porin BA894_20680 PF00356 Bacterial regulatory proteins, lacI family BA894_20685 PF12706 Beta-lactamase superfamily domain BA894_20690 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BA894_20690 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA894_20710 PF03825 Nucleoside H+ symporter BA894_20715 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BA894_20715 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BA894_20720 PF00356 Bacterial regulatory proteins, lacI family BA894_20725 PF02685 Glucokinase BA894_20730 PF01047 MarR family BA894_20740 PF07690 Major Facilitator Superfamily BA894_20745 PF02378 Phosphotransferase system, EIIC BA894_20770 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BA894_20780 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BA894_20785 PF00232 Glycosyl hydrolase family 1 BA894_20790 PF12833 Helix-turn-helix domain BA894_20790 PF02311 AraC-like ligand binding domain BA894_20800 PF00465 Iron-containing alcohol dehydrogenase BA894_20805 PF02129 X-Pro dipeptidyl-peptidase (S15 family) BA894_20810 PF01965 DJ-1/PfpI family BA894_20810 PF12833 Helix-turn-helix domain BA894_20825 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BA894_20830 PF13183 4Fe-4S dicluster domain BA894_20830 PF02754 Cysteine-rich domain BA894_20835 PF00766 Electron transfer flavoprotein FAD-binding domain BA894_20835 PF01012 Electron transfer flavoprotein domain BA894_20845 PF02028 BCCT, betaine/carnitine/choline family transporter BA894_20855 PF00248 Aldo/keto reductase family BA894_20860 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BA894_20860 PF02874 ATP synthase alpha/beta family, beta-barrel domain BA894_20875 PF00119 ATP synthase A chain BA894_20880 PF00137 ATP synthase subunit C BA894_20885 PF00430 ATP synthase B/B' CF(0) BA894_20885 PF00213 ATP synthase delta (OSCP) subunit BA894_20890 PF00306 ATP synthase alpha/beta chain, C terminal domain BA894_20890 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BA894_20915 PF13411 MerR HTH family regulatory protein BA894_20920 PF02627 Carboxymuconolactone decarboxylase family BA894_20935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_20935 PF03466 LysR substrate binding domain BA894_20940 PF00171 Aldehyde dehydrogenase family BA894_20945 PF03480 Bacterial extracellular solute-binding protein, family 7 BA894_20955 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BA894_20965 PF00202 Aminotransferase class-III BA894_20970 PF00355 Rieske [2Fe-2S] domain BA894_20970 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BA894_20975 PF00970 Oxidoreductase FAD-binding domain BA894_20975 PF00111 2Fe-2S iron-sulfur cluster binding domain BA894_20975 PF00175 Oxidoreductase NAD-binding domain BA894_20980 PF00464 Serine hydroxymethyltransferase BA894_20985 PF01266 FAD dependent oxidoreductase BA894_20990 PF04267 Sarcosine oxidase, delta subunit family BA894_20995 PF01571 Aminomethyltransferase folate-binding domain BA894_20995 PF08669 Glycine cleavage T-protein C-terminal barrel domain BA894_20995 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA894_20995 PF17806 Sarcosine oxidase A3 domain BA894_21005 PF00551 Formyl transferase BA894_21010 PF03315 Serine dehydratase beta chain BA894_21010 PF03313 Serine dehydratase alpha chain BA894_21015 PF12833 Helix-turn-helix domain BA894_21020 PF00107 Zinc-binding dehydrogenase BA894_21020 PF08240 Alcohol dehydrogenase GroES-like domain BA894_21025 PF00465 Iron-containing alcohol dehydrogenase BA894_21030 PF16363 GDP-mannose 4,6 dehydratase BA894_21035 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain BA894_21035 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain BA894_21040 PF10509 Galactokinase galactose-binding signature BA894_21040 PF00288 GHMP kinases N terminal domain BA894_21040 PF08544 GHMP kinases C terminal BA894_21045 PF12833 Helix-turn-helix domain BA894_21045 PF02311 AraC-like ligand binding domain BA894_21050 PF16875 Glycosyl hydrolase family 36 N-terminal domain BA894_21050 PF16874 Glycosyl hydrolase family 36 C-terminal domain BA894_21065 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA894_21070 PF00528 Binding-protein-dependent transport system inner membrane component BA894_21080 PF00005 ABC transporter BA894_21080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA894_21085 PF08244 Glycosyl hydrolases family 32 C terminal BA894_21085 PF00251 Glycosyl hydrolases family 32 N-terminal domain BA894_21090 PF06719 AraC-type transcriptional regulator N-terminus BA894_21090 PF12833 Helix-turn-helix domain BA894_21105 PF00155 Aminotransferase class I and II BA894_21130 PF04198 Putative sugar-binding domain BA894_21135 PF08125 Mannitol dehydrogenase C-terminal domain BA894_21135 PF01232 Mannitol dehydrogenase Rossmann domain BA894_21140 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BA894_21140 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BA894_21145 PF07690 Major Facilitator Superfamily BA894_21150 PF13419 Haloacid dehalogenase-like hydrolase BA894_21155 PF11775 Cobalamin biosynthesis protein CobT VWA domain BA894_21155 PF06213 Cobalamin biosynthesis protein CobT BA894_21160 PF08406 CbbQ/NirQ/NorQ C-terminal BA894_21160 PF07728 AAA domain (dynein-related subfamily) BA894_21160 PF12556 Cobaltochelatase CobS subunit N terminal BA894_21165 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BA894_21165 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BA894_21165 PF00205 Thiamine pyrophosphate enzyme, central domain BA894_21170 PF03601 Conserved hypothetical protein 698 BA894_21185 PF01266 FAD dependent oxidoreductase BA894_21190 PF03480 Bacterial extracellular solute-binding protein, family 7 BA894_21195 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component BA894_21200 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BA894_21210 PF09339 IclR helix-turn-helix domain BA894_21210 PF01614 Bacterial transcriptional regulator BA894_21215 PF01515 Phosphate acetyl/butaryl transferase BA894_21220 PF01925 Sulfite exporter TauE/SafE BA894_21225 PF00990 Diguanylate cyclase, GGDEF domain BA894_21225 PF00072 Response regulator receiver domain BA894_21240 PF12849 PBP superfamily domain BA894_21250 PF13276 HTH-like domain BA894_21250 PF13333 Integrase core domain BA894_21250 PF00665 Integrase core domain BA894_21260 PF08206 Ribonuclease B OB domain BA894_21260 PF00575 S1 RNA binding domain BA894_21260 PF00773 RNB domain BA894_21265 PF00582 Universal stress protein family BA894_21275 PF13244 Domain of unknown function (DUF4040) BA894_21275 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BA894_21275 PF00361 Proton-conducting membrane transporter BA894_21275 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter BA894_21295 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) BA894_21300 PF03334 Na+/H+ antiporter subunit BA894_21305 PF00455 DeoR C terminal sensor domain BA894_21305 PF08220 DeoR-like helix-turn-helix domain BA894_21310 PF07881 L-fucose isomerase, first N-terminal domain BA894_21310 PF07882 L-fucose isomerase, second N-terminal domain BA894_21310 PF02952 L-fucose isomerase, C-terminal domain BA894_21315 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BA894_21315 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BA894_21320 PF00596 Class II Aldolase and Adducin N-terminal domain BA894_21325 PF00465 Iron-containing alcohol dehydrogenase BA894_21330 PF03880 DbpA RNA binding domain BA894_21330 PF00271 Helicase conserved C-terminal domain BA894_21330 PF00270 DEAD/DEAH box helicase BA894_21335 PF00990 Diguanylate cyclase, GGDEF domain BA894_21335 PF03707 Bacterial signalling protein N terminal repeat BA894_21335 PF00563 EAL domain BA894_21340 PF00871 Acetokinase family BA894_21375 PF01965 DJ-1/PfpI family BA894_21380 PF12706 Beta-lactamase superfamily domain BA894_21390 PF00294 pfkB family carbohydrate kinase BA894_21400 PF01773 Na+ dependent nucleoside transporter N-terminus BA894_21400 PF07662 Na+ dependent nucleoside transporter C-terminus BA894_21405 PF03502 Nucleoside-specific channel-forming protein, Tsx BA894_21410 PF00158 Sigma-54 interaction domain BA894_21410 PF01590 GAF domain BA894_21415 PF00258 Flavodoxin BA894_21415 PF00301 Rubredoxin BA894_21415 PF00753 Metallo-beta-lactamase superfamily BA894_21420 PF18113 Rubredoxin binding C-terminal domain BA894_21420 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA894_21435 PF01814 Hemerythrin HHE cation binding domain BA894_21435 PF04405 Domain of Unknown function (DUF542) BA894_21440 PF00072 Response regulator receiver domain BA894_21440 PF00196 Bacterial regulatory proteins, luxR family BA894_21445 PF07730 Histidine kinase BA894_21445 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term BA894_21445 PF00672 HAMP domain BA894_21445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA894_21450 PF07690 Major Facilitator Superfamily BA894_21455 PF14710 Respiratory nitrate reductase alpha N-terminal BA894_21455 PF01568 Molydopterin dinucleotide binding domain BA894_21455 PF00384 Molybdopterin oxidoreductase BA894_21460 PF13247 4Fe-4S dicluster domain BA894_21460 PF14711 Respiratory nitrate reductase beta C-terminal BA894_21465 PF02613 Nitrate reductase delta subunit BA894_21470 PF02665 Nitrate reductase gamma subunit BA894_21510 PF00990 Diguanylate cyclase, GGDEF domain BA894_21535 PF00069 Protein kinase domain BA894_21535 PF03793 PASTA domain BA894_21570 PF02371 Transposase IS116/IS110/IS902 family BA894_21570 PF01548 Transposase BA894_21575 PF08378 Nuclease-related domain BA894_21600 PF00563 EAL domain BA894_21600 PF00990 Diguanylate cyclase, GGDEF domain BA894_21600 PF03707 Bacterial signalling protein N terminal repeat BA894_21645 PF00672 HAMP domain BA894_21645 PF02743 Cache domain BA894_21645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA894_21675 PF01938 TRAM domain BA894_21675 PF05958 tRNA (Uracil-5-)-methyltransferase BA894_21685 PF00583 Acetyltransferase (GNAT) family BA894_21705 PF13657 HipA N-terminal domain BA894_21705 PF07804 HipA-like C-terminal domain BA894_21720 PF13426 PAS domain BA894_21720 PF08447 PAS fold BA894_21720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA894_21730 PF10063 Uncharacterized integral membrane protein (DUF2301) BA894_21735 PF00682 HMGL-like BA894_21745 PF01039 Carboxyl transferase domain BA894_21750 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BA894_21750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BA894_21750 PF02770 Acyl-CoA dehydrogenase, middle domain BA894_21755 PF00376 MerR family regulatory protein BA894_21755 PF09278 MerR, DNA binding BA894_21760 PF00108 Thiolase, N-terminal domain BA894_21760 PF02803 Thiolase, C-terminal domain BA894_21765 PF00171 Aldehyde dehydrogenase family BA894_21770 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BA894_21770 PF02770 Acyl-CoA dehydrogenase, middle domain BA894_21770 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BA894_21775 PF00378 Enoyl-CoA hydratase/isomerase BA894_21780 PF00378 Enoyl-CoA hydratase/isomerase BA894_21785 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BA894_21785 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BA894_21795 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BA894_21795 PF06481 COX Aromatic Rich Motif BA894_21800 PF00115 Cytochrome C and Quinol oxidase polypeptide I BA894_21805 PF00510 Cytochrome c oxidase subunit III BA894_21815 PF01040 UbiA prenyltransferase family BA894_21820 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BA894_21830 PF13520 Amino acid permease BA894_21835 PF02574 Homocysteine S-methyltransferase BA894_21860 PF00141 Peroxidase BA894_21870 PF08031 Berberine and berberine like BA894_21870 PF01565 FAD binding domain BA894_21875 PF00005 ABC transporter BA894_21880 PF00497 Bacterial extracellular solute-binding proteins, family 3 BA894_21885 PF00528 Binding-protein-dependent transport system inner membrane component BA894_21890 PF00528 Binding-protein-dependent transport system inner membrane component BA894_21895 PF01235 Sodium:alanine symporter family BA894_21905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_21905 PF03466 LysR substrate binding domain BA894_21915 PF05995 Cysteine dioxygenase type I BA894_21920 PF00082 Subtilase family BA894_21930 PF10605 3HB-oligomer hydrolase (3HBOH) BA894_21935 PF00158 Sigma-54 interaction domain BA894_21935 PF01590 GAF domain BA894_21955 PF00689 Cation transporting ATPase, C-terminus BA894_21955 PF00690 Cation transporter/ATPase, N-terminus BA894_21960 PF00384 Molybdopterin oxidoreductase BA894_21960 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BA894_21960 PF01568 Molydopterin dinucleotide binding domain BA894_21970 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B BA894_21975 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BA894_21975 PF02896 PEP-utilising enzyme, TIM barrel domain BA894_21975 PF00391 PEP-utilising enzyme, mobile domain BA894_21985 PF02817 e3 binding domain BA894_21985 PF00364 Biotin-requiring enzyme BA894_21985 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BA894_21990 PF02780 Transketolase, C-terminal domain BA894_21990 PF02779 Transketolase, pyrimidine binding domain BA894_21990 PF00364 Biotin-requiring enzyme BA894_21995 PF00501 AMP-binding enzyme BA894_21995 PF13193 AMP-binding enzyme C-terminal domain BA894_22010 PF03928 Haem-degrading BA894_22015 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BA894_22015 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BA894_22020 PF08220 DeoR-like helix-turn-helix domain BA894_22020 PF00455 DeoR C terminal sensor domain BA894_22025 PF16197 Ketoacyl-synthetase C-terminal extension BA894_22025 PF00202 Aminotransferase class-III BA894_22025 PF00501 AMP-binding enzyme BA894_22025 PF00550 Phosphopantetheine attachment site BA894_22025 PF02801 Beta-ketoacyl synthase, C-terminal domain BA894_22025 PF00109 Beta-ketoacyl synthase, N-terminal domain BA894_22025 PF13193 AMP-binding enzyme C-terminal domain BA894_22025 PF00668 Condensation domain BA894_22035 PF02817 e3 binding domain BA894_22035 PF00364 Biotin-requiring enzyme BA894_22035 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BA894_22040 PF02780 Transketolase, C-terminal domain BA894_22040 PF02779 Transketolase, pyrimidine binding domain BA894_22045 PF00676 Dehydrogenase E1 component BA894_22060 PF00012 Hsp70 protein BA894_22090 PF03222 Tryptophan/tyrosine permease family BA894_22095 PF02885 Glycosyl transferase family, helical bundle domain BA894_22095 PF00591 Glycosyl transferase family, a/b domain BA894_22100 PF01063 Amino-transferase class IV BA894_22150 PF02347 Glycine cleavage system P-protein BA894_22155 PF01597 Glycine cleavage H-protein BA894_22160 PF00464 Serine hydroxymethyltransferase BA894_22170 PF01571 Aminomethyltransferase folate-binding domain BA894_22170 PF08669 Glycine cleavage T-protein C-terminal barrel domain BA894_22180 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BA894_22190 PF00873 AcrB/AcrD/AcrF family BA894_22195 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BA894_22195 PF02378 Phosphotransferase system, EIIC BA894_22200 PF00294 pfkB family carbohydrate kinase BA894_22205 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BA894_22205 PF00381 PTS HPr component phosphorylation site BA894_22210 PF00356 Bacterial regulatory proteins, lacI family BA894_22210 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BA894_22225 PF00528 Binding-protein-dependent transport system inner membrane component BA894_22230 PF00497 Bacterial extracellular solute-binding proteins, family 3 BA894_22235 PF00528 Binding-protein-dependent transport system inner membrane component BA894_22240 PF00005 ABC transporter BA894_22250 PF00465 Iron-containing alcohol dehydrogenase BA894_22255 PF06719 AraC-type transcriptional regulator N-terminus BA894_22255 PF12833 Helix-turn-helix domain BA894_22260 PF00704 Glycosyl hydrolases family 18 BA894_22260 PF06483 Chitinase C BA894_22265 PF00483 Nucleotidyl transferase BA894_22270 PF01268 Formate--tetrahydrofolate ligase BA894_22275 PF00294 pfkB family carbohydrate kinase BA894_22290 PF13419 Haloacid dehalogenase-like hydrolase BA894_22295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA894_22295 PF00672 HAMP domain BA894_22295 PF02743 Cache domain BA894_22300 PF04336 Acyl carrier protein phosphodiesterase BA894_22305 PF00270 DEAD/DEAH box helicase BA894_22305 PF00271 Helicase conserved C-terminal domain BA894_22310 PF12792 CSS motif domain associated with EAL BA894_22310 PF00563 EAL domain BA894_22325 PF01292 Prokaryotic cytochrome b561 BA894_22330 PF04264 YceI-like domain BA894_22335 PF01226 Formate/nitrite transporter BA894_22340 PF03466 LysR substrate binding domain BA894_22340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_22345 PF06496 Protein of unknown function (DUF1097) BA894_22350 PF11398 Protein of unknown function (DUF2813) BA894_22355 PF02872 5'-nucleotidase, C-terminal domain BA894_22355 PF00149 Calcineurin-like phosphoesterase BA894_22360 PF03741 Integral membrane protein TerC family BA894_22375 PF12262 Bacterial virulence factor lipase N-terminal BA894_22380 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) BA894_22390 PF01435 Peptidase family M48 BA894_22395 PF03061 Thioesterase superfamily BA894_22405 PF12793 Sugar transport-related sRNA regulator N-term BA894_22405 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA894_22415 PF03091 CutA1 divalent ion tolerance protein BA894_22430 PF01556 DnaJ C terminal domain BA894_22430 PF00684 DnaJ central domain BA894_22430 PF00226 DnaJ domain BA894_22440 PF00990 Diguanylate cyclase, GGDEF domain BA894_22440 PF03707 Bacterial signalling protein N terminal repeat BA894_22440 PF13188 PAS domain BA894_22440 PF00563 EAL domain BA894_22445 PF12241 Trans-2-enoyl-CoA reductase catalytic region BA894_22445 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase BA894_22445 PF07055 Enoyl reductase FAD binding domain BA894_22450 PF13472 GDSL-like Lipase/Acylhydrolase family BA894_22455 PF00005 ABC transporter BA894_22465 PF01593 Flavin containing amine oxidoreductase BA894_22470 PF02626 Carboxyltransferase domain, subdomain A and B BA894_22475 PF02682 Carboxyltransferase domain, subdomain C and D BA894_22480 PF03746 LamB/YcsF family BA894_22485 PF08448 PAS fold BA894_22485 PF00990 Diguanylate cyclase, GGDEF domain BA894_22485 PF13426 PAS domain BA894_22485 PF05231 MASE1 BA894_22485 PF00563 EAL domain BA894_22485 PF08447 PAS fold BA894_22490 PF16363 GDP-mannose 4,6 dehydratase BA894_22495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_22495 PF03466 LysR substrate binding domain BA894_22500 PF13380 CoA binding domain BA894_22500 PF00583 Acetyltransferase (GNAT) family BA894_22500 PF13607 Succinyl-CoA ligase like flavodoxin domain BA894_22505 PF05036 Sporulation related domain BA894_22510 PF07478 D-ala D-ala ligase C-terminus BA894_22510 PF01820 D-ala D-ala ligase N-terminus BA894_22520 PF01253 Translation initiation factor SUI1 BA894_22545 PF00582 Universal stress protein family BA894_22560 PF00486 Transcriptional regulatory protein, C terminal BA894_22560 PF00072 Response regulator receiver domain BA894_22570 PF02233 NAD(P) transhydrogenase beta subunit BA894_22575 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BA894_22575 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BA894_22575 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BA894_22590 PF00990 Diguanylate cyclase, GGDEF domain BA894_22590 PF05230 MASE2 domain BA894_22595 PF00990 Diguanylate cyclase, GGDEF domain BA894_22595 PF01590 GAF domain BA894_22595 PF00563 EAL domain BA894_22595 PF00360 Phytochrome region BA894_22605 PF00005 ABC transporter BA894_22605 PF03459 TOBE domain BA894_22610 PF00528 Binding-protein-dependent transport system inner membrane component BA894_22620 PF07685 CobB/CobQ-like glutamine amidotransferase domain BA894_22630 PF08443 RimK-like ATP-grasp domain BA894_22630 PF18030 RimK PreATP-grasp domain BA894_22635 PF00155 Aminotransferase class I and II BA894_22640 PF12852 Cupin BA894_22640 PF12833 Helix-turn-helix domain BA894_22645 PF01554 MatE BA894_22655 PF13597 Anaerobic ribonucleoside-triphosphate reductase BA894_22655 PF03477 ATP cone domain BA894_22665 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BA894_22670 PF00873 AcrB/AcrD/AcrF family BA894_22680 PF04143 Sulphur transport BA894_22700 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BA894_22700 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA894_22705 PF13657 HipA N-terminal domain BA894_22705 PF07804 HipA-like C-terminal domain BA894_22735 PF02743 Cache domain BA894_22735 PF00672 HAMP domain BA894_22735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA894_22780 PF03707 Bacterial signalling protein N terminal repeat BA894_22780 PF00990 Diguanylate cyclase, GGDEF domain BA894_22780 PF00563 EAL domain BA894_22840 PF12833 Helix-turn-helix domain BA894_22860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA894_22870 PF01389 OmpA-like transmembrane domain BA894_22870 PF00691 OmpA family BA894_22885 PF13953 PapC C-terminal domain BA894_22885 PF13954 PapC N-terminal domain BA894_22885 PF00577 Outer membrane usher protein BA894_22890 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BA894_22890 PF02753 Pili assembly chaperone PapD, C-terminal domain BA894_22895 PF00419 Fimbrial protein BA894_22905 PF00990 Diguanylate cyclase, GGDEF domain BA894_22910 PF00072 Response regulator receiver domain BA894_22910 PF00196 Bacterial regulatory proteins, luxR family BA894_22915 PF03707 Bacterial signalling protein N terminal repeat BA894_22915 PF13188 PAS domain BA894_22915 PF00563 EAL domain BA894_22915 PF00990 Diguanylate cyclase, GGDEF domain BA894_22930 PF01810 LysE type translocator BA894_22945 PF01546 Peptidase family M20/M25/M40 BA894_22945 PF07687 Peptidase dimerisation domain BA894_22950 PF00291 Pyridoxal-phosphate dependent enzyme BA894_22955 PF01546 Peptidase family M20/M25/M40 BA894_22955 PF07687 Peptidase dimerisation domain BA894_22960 PF01037 Lrp/AsnC ligand binding domain BA894_22975 PF13737 Transposase DDE domain BA894_22985 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA894_22985 PF18113 Rubredoxin binding C-terminal domain BA894_22990 PF00301 Rubredoxin BA894_22990 PF00258 Flavodoxin BA894_22990 PF00753 Metallo-beta-lactamase superfamily BA894_22995 PF01590 GAF domain BA894_22995 PF00158 Sigma-54 interaction domain BA894_23005 PF13737 Transposase DDE domain BA894_23010 PF03466 LysR substrate binding domain BA894_23010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_23015 PF00107 Zinc-binding dehydrogenase BA894_23015 PF08240 Alcohol dehydrogenase GroES-like domain BA894_23045 PF00239 Resolvase, N terminal domain BA894_23045 PF07508 Recombinase BA894_23045 PF13408 Recombinase zinc beta ribbon domain BA894_23050 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BA894_23050 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA894_23055 PF00384 Molybdopterin oxidoreductase BA894_23055 PF01568 Molydopterin dinucleotide binding domain BA894_23060 PF03466 LysR substrate binding domain BA894_23060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_23065 PF02634 FdhD/NarQ family BA894_23085 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BA894_23085 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BA894_23090 PF00085 Thioredoxin BA894_23095 PF07690 Major Facilitator Superfamily BA894_23100 PF11756 Nitrous oxide-stimulated promoter BA894_23115 PF03605 Anaerobic c4-dicarboxylate membrane transporter BA894_23130 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BA894_23130 PF14824 Sirohaem biosynthesis protein central BA894_23130 PF10414 Sirohaem synthase dimerisation region BA894_23135 PF01226 Formate/nitrite transporter BA894_23140 PF13806 Rieske-like [2Fe-2S] domain BA894_23145 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BA894_23145 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BA894_23145 PF04324 BFD-like [2Fe-2S] binding domain BA894_23145 PF18267 Rubredoxin NAD+ reductase C-terminal domain BA894_23145 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA894_23150 PF01272 Transcription elongation factor, GreA/GreB, C-term BA894_23150 PF14760 Rnk N-terminus BA894_23155 PF00563 EAL domain BA894_23155 PF00990 Diguanylate cyclase, GGDEF domain BA894_23155 PF13426 PAS domain BA894_23180 PF13462 Thioredoxin BA894_23180 PF06965 Na+/H+ antiporter 1 BA894_23190 PF00990 Diguanylate cyclase, GGDEF domain BA894_23190 PF00072 Response regulator receiver domain BA894_23235 PF09330 D-lactate dehydrogenase, membrane binding BA894_23235 PF01565 FAD binding domain BA894_23240 PF03466 LysR substrate binding domain BA894_23240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_23250 PF05762 VWA domain containing CoxE-like protein BA894_23255 PF17868 AAA lid domain BA894_23255 PF07728 AAA domain (dynein-related subfamily) BA894_23255 PF12592 Protein of unknown function (DUF3763) BA894_23265 PF01212 Beta-eliminating lyase BA894_23280 PF08212 Lipocalin-like domain BA894_23290 PF05368 NmrA-like family BA894_23295 PF01638 HxlR-like helix-turn-helix BA894_23315 PF13476 AAA domain BA894_23320 PF12320 Type 5 capsule protein repressor C-terminal domain BA894_23320 PF00149 Calcineurin-like phosphoesterase BA894_23325 PF00107 Zinc-binding dehydrogenase BA894_23325 PF16884 N-terminal domain of oxidoreductase BA894_23330 PF01047 MarR family BA894_23340 PF00486 Transcriptional regulatory protein, C terminal BA894_23340 PF00072 Response regulator receiver domain BA894_23345 PF00672 HAMP domain BA894_23345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA894_23345 PF00512 His Kinase A (phospho-acceptor) domain BA894_23360 PF01804 Penicillin amidase BA894_23365 PF00005 ABC transporter BA894_23365 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA894_23370 PF00528 Binding-protein-dependent transport system inner membrane component BA894_23370 PF12911 N-terminal TM domain of oligopeptide transport permease C BA894_23375 PF00528 Binding-protein-dependent transport system inner membrane component BA894_23380 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA894_23385 PF01554 MatE BA894_23390 PF00005 ABC transporter BA894_23395 PF00528 Binding-protein-dependent transport system inner membrane component BA894_23400 PF00528 Binding-protein-dependent transport system inner membrane component BA894_23410 PF01418 Helix-turn-helix domain, rpiR family BA894_23410 PF01380 SIS domain BA894_23420 PF01144 Coenzyme A transferase BA894_23425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_23425 PF03466 LysR substrate binding domain BA894_23430 PF00196 Bacterial regulatory proteins, luxR family BA894_23430 PF00072 Response regulator receiver domain BA894_23435 PF07730 Histidine kinase BA894_23435 PF17200 Single Cache domain 2 BA894_23440 PF03480 Bacterial extracellular solute-binding protein, family 7 BA894_23450 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BA894_23470 PF00141 Peroxidase BA894_23520 PF03466 LysR substrate binding domain BA894_23520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_23525 PF02678 Pirin BA894_23525 PF05726 Pirin C-terminal cupin domain BA894_23540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_23540 PF03466 LysR substrate binding domain BA894_23545 PF07681 DoxX BA894_23550 PF00857 Isochorismatase family BA894_23570 PF05726 Pirin C-terminal cupin domain BA894_23570 PF02678 Pirin BA894_23580 PF03358 NADPH-dependent FMN reductase BA894_23605 PF13333 Integrase core domain BA894_23605 PF00665 Integrase core domain BA894_23605 PF13276 HTH-like domain BA894_23610 PF01527 Transposase BA894_23625 PF00072 Response regulator receiver domain BA894_23625 PF12431 Transcriptional regulator BA894_23630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA894_23630 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BA894_23630 PF00989 PAS fold BA894_23630 PF17203 Single cache domain 3 BA894_23640 PF00939 Sodium:sulfate symporter transmembrane region BA894_23655 PF00892 EamA-like transporter family BA894_23685 PF00072 Response regulator receiver domain BA894_23685 PF00196 Bacterial regulatory proteins, luxR family BA894_23695 PF00990 Diguanylate cyclase, GGDEF domain BA894_23700 PF00196 Bacterial regulatory proteins, luxR family BA894_23700 PF00072 Response regulator receiver domain BA894_23705 PF00990 Diguanylate cyclase, GGDEF domain BA894_23705 PF03707 Bacterial signalling protein N terminal repeat BA894_23705 PF00563 EAL domain BA894_23705 PF13188 PAS domain BA894_23710 PF09456 RcsC Alpha-Beta-Loop (ABL) BA894_23710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA894_23710 PF00072 Response regulator receiver domain BA894_23710 PF00512 His Kinase A (phospho-acceptor) domain BA894_23715 PF01926 50S ribosome-binding GTPase BA894_23720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA894_23720 PF00072 Response regulator receiver domain BA894_23725 PF00583 Acetyltransferase (GNAT) family BA894_23725 PF00814 Glycoprotease family BA894_23735 PF03606 C4-dicarboxylate anaerobic carrier BA894_23740 PF04011 LemA family BA894_23745 PF01435 Peptidase family M48 BA894_23755 PF07690 Major Facilitator Superfamily BA894_23760 PF18081 Fanconi anemia-associated nuclease SAP domain BA894_23760 PF08774 VRR-NUC domain BA894_23765 PF00781 Diacylglycerol kinase catalytic domain BA894_23770 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BA894_23770 PF01872 RibD C-terminal domain BA894_23785 PF00092 von Willebrand factor type A domain BA894_23800 PF17863 AAA lid domain BA894_23800 PF07726 ATPase family associated with various cellular activities (AAA) BA894_23805 PF04055 Radical SAM superfamily BA894_23805 PF13186 Iron-sulfur cluster-binding domain BA894_23810 PF00884 Sulfatase BA894_23815 PF03466 LysR substrate binding domain BA894_23815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_23830 PF00672 HAMP domain BA894_23830 PF00072 Response regulator receiver domain BA894_23830 PF01627 Hpt domain BA894_23830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA894_23830 PF00512 His Kinase A (phospho-acceptor) domain BA894_23835 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BA894_23840 PF02142 MGS-like domain BA894_23845 PF00580 UvrD/REP helicase N-terminal domain BA894_23845 PF13361 UvrD-like helicase C-terminal domain BA894_23845 PF12462 DNA helicase IV / RNA helicase N terminal BA894_23850 PF12805 FUSC-like inner membrane protein yccS BA894_23860 PF13411 MerR HTH family regulatory protein BA894_23865 PF00356 Bacterial regulatory proteins, lacI family BA894_23870 PF00294 pfkB family carbohydrate kinase BA894_23875 PF13407 Periplasmic binding protein domain BA894_23880 PF02653 Branched-chain amino acid transport system / permease component BA894_23885 PF00005 ABC transporter BA894_23890 PF05025 RbsD / FucU transport protein family BA894_23895 PF00990 Diguanylate cyclase, GGDEF domain BA894_23895 PF00563 EAL domain BA894_23930 PF00258 Flavodoxin BA894_23935 PF03658 RnfH family Ubiquitin BA894_23940 PF02508 Rnf-Nqr subunit, membrane protein BA894_23945 PF04205 FMN-binding domain BA894_23950 PF03116 NQR2, RnfD, RnfE family BA894_23955 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BA894_23955 PF13237 4Fe-4S dicluster domain BA894_23955 PF13375 RnfC Barrel sandwich hybrid domain BA894_23955 PF10531 SLBB domain BA894_23960 PF04060 Putative Fe-S cluster BA894_23965 PF02508 Rnf-Nqr subunit, membrane protein BA894_23970 PF00072 Response regulator receiver domain BA894_23970 PF13426 PAS domain BA894_23970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA894_23975 PF13185 GAF domain BA894_23975 PF00158 Sigma-54 interaction domain BA894_23975 PF02954 Bacterial regulatory protein, Fis family BA894_23980 PF04055 Radical SAM superfamily BA894_23980 PF02579 Dinitrogenase iron-molybdenum cofactor BA894_23985 PF04891 NifQ BA894_23990 PF00313 'Cold-shock' DNA-binding domain BA894_23995 PF09905 DNA-binding protein VF530 BA894_24005 PF01810 LysE type translocator BA894_24010 PF03480 Bacterial extracellular solute-binding protein, family 7 BA894_24020 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BA894_24025 PF01202 Shikimate kinase BA894_24035 PF03466 LysR substrate binding domain BA894_24035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_24045 PF00892 EamA-like transporter family BA894_24050 PF03459 TOBE domain BA894_24050 PF00005 ABC transporter BA894_24055 PF00528 Binding-protein-dependent transport system inner membrane component BA894_24065 PF00639 PPIC-type PPIASE domain BA894_24070 PF04319 NifZ domain BA894_24080 PF00682 HMGL-like BA894_24085 PF00266 Aminotransferase class-V BA894_24090 PF01592 NifU-like N terminal domain BA894_24090 PF01106 NifU-like domain BA894_24090 PF04324 BFD-like [2Fe-2S] binding domain BA894_24100 PF02579 Dinitrogenase iron-molybdenum cofactor BA894_24105 PF00148 Nitrogenase component 1 type Oxidoreductase BA894_24110 PF00148 Nitrogenase component 1 type Oxidoreductase BA894_24120 PF02579 Dinitrogenase iron-molybdenum cofactor BA894_24120 PF16844 Dinitrogenase iron-molybdenum cofactor, N-terminal BA894_24130 PF11844 Domain of unknown function (DUF3364) BA894_24130 PF00148 Nitrogenase component 1 type Oxidoreductase BA894_24135 PF00148 Nitrogenase component 1 type Oxidoreductase BA894_24140 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family BA894_24145 PF04324 BFD-like [2Fe-2S] binding domain BA894_24145 PF00384 Molybdopterin oxidoreductase BA894_24145 PF01568 Molydopterin dinucleotide binding domain BA894_24145 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BA894_24155 PF04324 BFD-like [2Fe-2S] binding domain BA894_24155 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BA894_24155 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BA894_24155 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA894_24155 PF18267 Rubredoxin NAD+ reductase C-terminal domain BA894_24165 PF07690 Major Facilitator Superfamily BA894_24170 PF00069 Protein kinase domain BA894_24170 PF03793 PASTA domain BA894_24175 PF00072 Response regulator receiver domain BA894_24175 PF00196 Bacterial regulatory proteins, luxR family BA894_24180 PF12833 Helix-turn-helix domain BA894_24185 PF00933 Glycosyl hydrolase family 3 N terminal domain BA894_24185 PF14310 Fibronectin type III-like domain BA894_24185 PF01915 Glycosyl hydrolase family 3 C-terminal domain BA894_24190 PF04116 Fatty acid hydroxylase superfamily BA894_24205 PF13188 PAS domain BA894_24205 PF00563 EAL domain BA894_24205 PF03707 Bacterial signalling protein N terminal repeat BA894_24205 PF00990 Diguanylate cyclase, GGDEF domain BA894_24215 PF16200 C-terminal region of band_7 BA894_24215 PF01145 SPFH domain / Band 7 family BA894_24220 PF00005 ABC transporter BA894_24220 PF00571 CBS domain BA894_24225 PF00528 Binding-protein-dependent transport system inner membrane component BA894_24230 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BA894_24235 PF00732 GMC oxidoreductase BA894_24235 PF05199 GMC oxidoreductase BA894_24240 PF00171 Aldehyde dehydrogenase family BA894_24245 PF00440 Bacterial regulatory proteins, tetR family BA894_24245 PF13977 BetI-type transcriptional repressor, C-terminal BA894_24255 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BA894_24255 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BA894_24265 PF00378 Enoyl-CoA hydratase/isomerase BA894_24270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BA894_24270 PF02770 Acyl-CoA dehydrogenase, middle domain BA894_24270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BA894_24275 PF00171 Aldehyde dehydrogenase family BA894_24280 PF00108 Thiolase, N-terminal domain BA894_24280 PF02803 Thiolase, C-terminal domain BA894_24285 PF00376 MerR family regulatory protein BA894_24285 PF09278 MerR, DNA binding BA894_24290 PF02770 Acyl-CoA dehydrogenase, middle domain BA894_24290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BA894_24290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BA894_24295 PF01039 Carboxyl transferase domain BA894_24300 PF00378 Enoyl-CoA hydratase/isomerase BA894_24305 PF02785 Biotin carboxylase C-terminal domain BA894_24305 PF00289 Biotin carboxylase, N-terminal domain BA894_24305 PF00364 Biotin-requiring enzyme BA894_24305 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BA894_24310 PF00682 HMGL-like BA894_24330 PF08267 Cobalamin-independent synthase, N-terminal domain BA894_24330 PF01717 Cobalamin-independent synthase, Catalytic domain BA894_24340 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BA894_24340 PF13378 Enolase C-terminal domain-like BA894_24350 PF00528 Binding-protein-dependent transport system inner membrane component BA894_24355 PF00528 Binding-protein-dependent transport system inner membrane component BA894_24360 PF00497 Bacterial extracellular solute-binding proteins, family 3 BA894_24365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_24365 PF03466 LysR substrate binding domain BA894_24370 PF03060 Nitronate monooxygenase BA894_24375 PF12794 Mechanosensitive ion channel inner membrane domain 1 BA894_24375 PF12795 Mechanosensitive ion channel porin domain BA894_24375 PF00924 Mechanosensitive ion channel BA894_24385 PF00034 Cytochrome c BA894_24400 PF00501 AMP-binding enzyme BA894_24400 PF14535 AMP-binding enzyme C-terminal domain BA894_24405 PF00005 ABC transporter BA894_24430 PF12399 Branched-chain amino acid ATP-binding cassette transporter BA894_24430 PF00005 ABC transporter BA894_24440 PF01012 Electron transfer flavoprotein domain BA894_24445 PF00766 Electron transfer flavoprotein FAD-binding domain BA894_24445 PF01012 Electron transfer flavoprotein domain BA894_24450 PF00497 Bacterial extracellular solute-binding proteins, family 3 BA894_24450 PF00072 Response regulator receiver domain BA894_24450 PF01627 Hpt domain BA894_24450 PF00512 His Kinase A (phospho-acceptor) domain BA894_24450 PF00989 PAS fold BA894_24450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA894_24460 PF03466 LysR substrate binding domain BA894_24460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_24470 PF12464 Maltose acetyltransferase BA894_24470 PF14602 Hexapeptide repeat of succinyl-transferase BA894_24475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA894_24480 PF00892 EamA-like transporter family BA894_24485 PF07690 Major Facilitator Superfamily BA894_24490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_24490 PF03466 LysR substrate binding domain BA894_24495 PF00149 Calcineurin-like phosphoesterase BA894_24510 PF01875 Memo-like protein BA894_24535 PF00795 Carbon-nitrogen hydrolase BA894_24535 PF02540 NAD synthase BA894_24540 PF02447 GntP family permease BA894_24545 PF01261 Xylose isomerase-like TIM barrel BA894_24550 PF00596 Class II Aldolase and Adducin N-terminal domain BA894_24555 PF07005 Sugar-binding N-terminal domain BA894_24555 PF17042 Nucleotide-binding C-terminal domain BA894_24560 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BA894_24560 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BA894_24565 PF08220 DeoR-like helix-turn-helix domain BA894_24565 PF00455 DeoR C terminal sensor domain BA894_24570 PF00248 Aldo/keto reductase family BA894_24575 PF01979 Amidohydrolase family BA894_24580 PF00795 Carbon-nitrogen hydrolase BA894_24585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA894_24585 PF03466 LysR substrate binding domain BA894_24605 PF00132 Bacterial transferase hexapeptide (six repeats) BA894_24640 PF13533 Biotin-lipoyl like BA894_24645 PF00005 ABC transporter BA894_24645 PF00664 ABC transporter transmembrane region BA894_24650 PF00664 ABC transporter transmembrane region BA894_24650 PF00005 ABC transporter BA894_24665 PF03480 Bacterial extracellular solute-binding protein, family 7 BA894_24675 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BA894_24680 PF12706 Beta-lactamase superfamily domain