locus-tag	class	description
BA894_00010	COG0592	DNA-directed DNA polymerase activity
BA894_00015	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
BA894_00020	COG0187	DNA topoisomerase II activity
BA894_00030	COG0071	Belongs to the small heat shock protein (HSP20) family
BA894_00035	COG3977	Valine--pyruvate aminotransferase
BA894_00040	COG0366	Alpha amylase catalytic
BA894_00045	COG0751	glycine-tRNA ligase activity
BA894_00055	COG2119	membrane
BA894_00065	COG0425	Belongs to the sulfur carrier protein TusA family
BA894_00080	COG0604	alcohol dehydrogenase
BA894_00085	COG0183	Belongs to the thiolase family
BA894_00090	COG1024	Enoyl-CoA hydratase
BA894_00090	COG1250	3-hydroxyacyl-CoA dehydrogenase
BA894_00095	COG1739	Uncharacterized protein family UPF0029
BA894_00100	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
BA894_00140	COG1263	PTS System
BA894_00140	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BA894_00145	COG2205	protein histidine kinase activity
BA894_00155	COG0583	DNA-binding transcription factor activity
BA894_00160	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
BA894_00165	COG2960	long-chain fatty acid transporting porin activity
BA894_00170	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BA894_00175	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BA894_00180	COG1309	transcriptional regulator
BA894_00225	COG4172	Belongs to the ABC transporter superfamily
BA894_00230	COG4166	transmembrane transport
BA894_00240	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BA894_00250	COG1609	Transcriptional regulator
BA894_00255	COG0129	dihydroxy-acid dehydratase activity
BA894_00260	COG3265	gluconokinase activity
BA894_00265	COG2610	gluconate transmembrane transporter activity
BA894_00270	COG0800	Aldolase
BA894_00275	COG3721	Heme iron utilization protein
BA894_00280	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BA894_00285	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
BA894_00295	COG1522	sequence-specific DNA binding
BA894_00300	COG0742	ribosomal rna small subunit methyltransferase
BA894_00310	COG0697	spore germination
BA894_00315	COG0589	response to stress
BA894_00320	COG1528	Iron-storage protein
BA894_00330	COG2081	HI0933 family
BA894_00380	COG5499	transcription regulator containing HTH domain
BA894_00395	COG3344	reverse transcriptase
BA894_00410	COG1120	ATPase activity
BA894_00415	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BA894_00420	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BA894_00425	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
BA894_00430	COG4772	TonB-dependent receptor
BA894_00450	COG2814	Major facilitator Superfamily
BA894_00455	COG4264	IucA IucC family
BA894_00460	COG0019	diaminopimelate decarboxylase activity
BA894_00495	COG4964	Belongs to the GSP D family
BA894_00545	COG0748	coenzyme F420 binding
BA894_00555	COG4988	ABC transporter
BA894_00560	COG1132	(ABC) transporter
BA894_00580	COG1322	Protein conserved in bacteria
BA894_00585	COG2226	methyltransferase
BA894_00590	COG3165	ubiquinone biosynthetic process from chorismate
BA894_00595	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
BA894_00610	COG0805	protein transport
BA894_00615	COG3263	regulation of cellular component size
BA894_00620	COG0084	hydrolase, TatD family'
BA894_00640	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BA894_00640	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BA894_00645	COG0218	Necessary for normal cell division and for the maintenance of normal septation
BA894_00670	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BA894_00675	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
BA894_00685	COG2204	response regulator
BA894_00690	COG3852	Histidine kinase
BA894_00700	COG0174	glutamine synthetase
BA894_00720	COG1295	ribonuclease BN
BA894_00725	COG1490	D-aminoacyl-tRNA deacylase activity
BA894_00730	COG0456	acetyltransferase
BA894_00740	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
BA894_00745	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
BA894_00750	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
BA894_00755	COG3031	protein transport across the cell outer membrane
BA894_00765	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
BA894_00770	COG1459	type II secretion system
BA894_00775	COG2165	general secretion pathway protein
BA894_00780	COG2165	general secretion pathway protein
BA894_00785	COG2165	general secretion pathway protein
BA894_00790	COG4795	General secretion pathway protein
BA894_00795	COG3156	type II secretion system protein K
BA894_00800	COG3297	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
BA894_00805	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
BA894_00815	COG1218	3'(2'),5'-bisphosphate nucleotidase
BA894_00820	COG0494	nUDIX hydrolase
BA894_00830	COG1040	competence protein
BA894_00835	COG0596	Alpha beta hydrolase
BA894_00845	COG2183	response to ionizing radiation
BA894_00855	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BA894_00865	COG0745	RESPONSE REGULATOR receiver
BA894_00875	COG2233	PERMEase
BA894_00880	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
BA894_00885	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BA894_00890	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BA894_00895	COG1758	RNA polymerase activity
BA894_00900	COG0194	GDP metabolic process
BA894_00915	COG0848	biopolymer transport protein
BA894_00920	COG0811	peptide transport
BA894_00940	COG4174	ABC transporter (Permease)
BA894_00945	COG4239	(ABC) transporter, permease
BA894_00950	COG0747	negative chemotaxis
BA894_01020	COG1061	Type III restriction enzyme res subunit
BA894_01105	COG0667	Aldo Keto reductase
BA894_01110	COG0656	L-ascorbic acid biosynthetic process
BA894_01120	COG2814	Major facilitator Superfamily
BA894_01135	COG1262	PFAM Formylglycine-generating sulfatase enzyme
BA894_01145	COG1064	alcohol dehydrogenase
BA894_01160	COG1028	Short-chain dehydrogenase reductase Sdr
BA894_01190	COG0667	Aldo Keto reductase
BA894_01195	COG3710	Transcriptional regulator
BA894_01205	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BA894_01210	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BA894_01215	COG2814	Major facilitator Superfamily
BA894_01220	COG0662	Cupin 2, conserved barrel domain protein
BA894_01220	COG2207	Transcriptional regulator
BA894_01230	COG1902	pentaerythritol trinitrate reductase activity
BA894_01240	COG0667	Aldo Keto reductase
BA894_01245	COG2272	Belongs to the type-B carboxylesterase lipase family
BA894_01285	COG1396	sequence-specific DNA binding
BA894_01360	COG1561	YicC-like family, N-terminal region
BA894_01365	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
BA894_01370	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
BA894_01375	COG1560	Kdo2-lipid A biosynthetic process
BA894_01380	COG1309	transcriptional regulator
BA894_01385	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BA894_01390	COG0840	transmembrane signaling receptor activity
BA894_01395	COG2003	Belongs to the UPF0758 family
BA894_01415	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
BA894_01430	COG0438	transferase activity, transferring glycosyl groups
BA894_01435	COG0463	Glycosyl transferase, family 2
BA894_01440	COG0859	PFAM glycosyl transferase family 9
BA894_01445	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
BA894_01450	COG3642	lipopolysaccharide core region biosynthetic process
BA894_01455	COG1086	Polysaccharide biosynthesis protein
BA894_01460	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
BA894_01465	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
BA894_01470	COG2089	acid synthase
BA894_01480	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
BA894_01485	COG1083	cytidylyl-transferase
BA894_01495	COG1519	Transferase
BA894_01500	COG0859	PFAM glycosyl transferase family 9
BA894_01505	COG1560	Kdo2-lipid A biosynthetic process
BA894_01515	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BA894_01585	COG0438	transferase activity, transferring glycosyl groups
BA894_01595	COG0110	maltose O-acetyltransferase activity
BA894_01600	COG0438	transferase activity, transferring glycosyl groups
BA894_01610	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BA894_01625	COG3206	protein involved in exopolysaccharide biosynthesis
BA894_01625	COG0489	protein tyrosine kinase activity
BA894_01630	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
BA894_01635	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
BA894_01665	COG1063	alcohol dehydrogenase
BA894_01680	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
BA894_01690	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
BA894_01705	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
BA894_01710	COG0149	triose-phosphate isomerase activity
BA894_01720	COG3152	Membrane
BA894_01735	COG1494	fructose-1,6-bisphosphatase
BA894_01745	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
BA894_01750	COG1575	Belongs to the MenA family. Type 1 subfamily
BA894_01755	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
BA894_01770	COG1609	Transcriptional regulator
BA894_01775	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
BA894_01780	COG0254	rRNA binding
BA894_01790	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
BA894_01795	COG0088	Forms part of the polypeptide exit tunnel
BA894_01805	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
BA894_01810	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
BA894_01815	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
BA894_01820	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
BA894_01830	COG0255	Belongs to the universal ribosomal protein uL29 family
BA894_01835	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
BA894_01845	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
BA894_01850	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
BA894_01865	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
BA894_01880	COG1841	ribosomal large subunit assembly
BA894_01890	COG0201	protein transport
BA894_01900	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
BA894_01905	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
BA894_01920	COG0203	ribosomal protein L17
BA894_01930	COG0545	Peptidyl-prolyl cis-trans isomerase
BA894_01940	COG2153	protein acetylation
BA894_01945	COG0513	Belongs to the DEAD box helicase family
BA894_01955	COG0737	Belongs to the 5'-nucleotidase family
BA894_01960	COG1648	precorrin-2 dehydrogenase activity
BA894_01960	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
BA894_01965	COG0175	sulfate reduction
BA894_01970	COG2895	sulfate adenylyltransferase (ATP) activity
BA894_01975	COG3273	potassium ion transport
BA894_01975	COG0471	metal ion transport
BA894_01980	COG0529	Catalyzes the synthesis of activated sulfate
BA894_02000	COG1136	(ABC) transporter
BA894_02010	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
BA894_02020	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BA894_02030	COG2911	Protein conserved in bacteria
BA894_02035	COG2105	PFAM AIG2 family protein
BA894_02040	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
BA894_02045	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
BA894_02050	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
BA894_02055	COG0163	prenyltransferase activity
BA894_02060	COG4143	(ABC) transporter
BA894_02065	COG1178	ABC-type Fe3 transport system permease component
BA894_02070	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
BA894_02075	COG0589	response to stress
BA894_02095	COG0039	L-malate dehydrogenase activity
BA894_02105	COG0142	geranyltranstransferase activity
BA894_02110	COG0261	This protein binds to 23S rRNA in the presence of protein L20
BA894_02120	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
BA894_02125	COG2966	Psort location CytoplasmicMembrane, score
BA894_02135	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
BA894_02145	COG2967	ApaG domain
BA894_02150	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
BA894_02155	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
BA894_02160	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BA894_02165	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
BA894_02170	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
BA894_02180	COG0066	3-isopropylmalate dehydratase activity
BA894_02190	COG0473	3-isopropylmalate dehydrogenase activity
BA894_02195	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BA894_02205	COG0671	phosphoesterase, PA-phosphatase related
BA894_02215	COG0583	DNA-binding transcription factor activity
BA894_02220	COG1022	Amp-dependent synthetase and ligase
BA894_02225	COG0028	Belongs to the TPP enzyme family
BA894_02230	COG0440	acetolactate synthase activity
BA894_02235	COG0469	pyruvate kinase activity
BA894_02240	COG1349	DNA-binding transcription factor activity
BA894_02245	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
BA894_02255	COG1263	PTS System
BA894_02255	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BA894_02260	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
BA894_02265	COG3722	fumarate hydratase activity
BA894_02270	COG0246	Mannitol dehydrogenase
BA894_02275	COG2213	PTS system mannitol-specific
BA894_02275	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
BA894_02310	COG1464	Belongs to the NlpA lipoprotein family
BA894_02315	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BA894_02330	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BA894_02335	COG0358	DNA primase activity
BA894_02340	COG1610	YqeY-like protein
BA894_02345	COG0828	Belongs to the bacterial ribosomal protein bS21 family
BA894_02350	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
BA894_02355	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
BA894_02360	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
BA894_02365	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
BA894_02370	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
BA894_02375	COG1968	undecaprenyl-diphosphatase activity
BA894_02380	COG0617	tRNA 3'-terminal CCA addition
BA894_02385	COG3409	Peptidoglycan-binding domain 1 protein
BA894_02385	COG3267	Type II secretory pathway component ExeA
BA894_02395	COG4991	sh3 domain protein
BA894_02400	COG0306	phosphate transporter
BA894_02405	COG1392	Phosphate transport regulator
BA894_02410	COG3025	triphosphatase activity
BA894_02425	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
BA894_02435	COG1538	Outer membrane efflux protein
BA894_02440	COG0494	nUDIX hydrolase
BA894_02445	COG3151	Protein conserved in bacteria
BA894_02455	COG3150	esterase
BA894_02460	COG0187	DNA topoisomerase II activity
BA894_02465	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BA894_02470	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BA894_02480	COG3105	Protein conserved in bacteria
BA894_02485	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
BA894_02490	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
BA894_02495	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
BA894_02500	COG0723	plastoquinol--plastocyanin reductase activity
BA894_02505	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
BA894_02510	COG2857	Cytochrome c1
BA894_02515	COG0625	glutathione transferase activity
BA894_02520	COG2969	positive regulation of protein catabolic process
BA894_02525	COG2823	Periplasmic or secreted lipoprotein
BA894_02530	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
BA894_02545	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
BA894_02555	COG0275	rRNA processing
BA894_02560	COG3116	cell division
BA894_02565	COG0768	penicillin binding
BA894_02570	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
BA894_02575	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
BA894_02580	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BA894_02585	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
BA894_02590	COG0772	Belongs to the SEDS family
BA894_02595	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
BA894_02600	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
BA894_02605	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
BA894_02610	COG0849	cell division
BA894_02615	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
BA894_02620	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
BA894_02630	COG0653	protein targeting
BA894_02635	COG0494	nUDIX hydrolase
BA894_02645	COG0505	Belongs to the CarA family
BA894_02650	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
BA894_02655	COG0730	response to heat
BA894_02660	COG0583	DNA-binding transcription factor activity
BA894_02665	COG2860	membrane
BA894_02670	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BA894_02675	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
BA894_02680	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
BA894_02690	COG0493	'glutamate synthase
BA894_02695	COG0067	glutamate synthase
BA894_02695	COG0069	glutamate synthase activity
BA894_02695	COG0070	glutamate synthase
BA894_02705	COG0070	glutamate synthase
BA894_02705	COG0067	glutamate synthase
BA894_02705	COG0069	glutamate synthase activity
BA894_02710	COG1242	4 iron, 4 sulfur cluster binding
BA894_02715	COG2198	Histidine kinase
BA894_02715	COG0784	Response regulator, receiver
BA894_02715	COG5002	protein histidine kinase activity
BA894_02725	COG0745	RESPONSE REGULATOR receiver
BA894_02735	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
BA894_02750	COG0083	homoserine kinase activity
BA894_02755	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
BA894_02760	COG3445	Acts as a radical domain for damaged PFL and possibly other radical proteins
BA894_02765	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
BA894_02770	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
BA894_02785	COG1115	amino acid carrier protein
BA894_02790	COG3022	response to hydroperoxide
BA894_02795	COG0513	Belongs to the DEAD box helicase family
BA894_02800	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
BA894_02810	COG0716	FMN binding
BA894_02820	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
BA894_02825	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
BA894_02830	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
BA894_02835	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
BA894_02840	COG3290	protein histidine kinase activity
BA894_02840	COG3829	transcription factor binding
BA894_02850	COG0667	Aldo Keto reductase
BA894_02860	COG3066	DNA modification
BA894_02875	COG0730	response to heat
BA894_02880	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
BA894_02885	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
BA894_02895	COG1283	sodium-dependent phosphate transmembrane transporter activity
BA894_02900	COG0583	DNA-binding transcription factor activity
BA894_02905	COG0640	Transcriptional regulator
BA894_02910	COG0268	Binds directly to 16S ribosomal RNA
BA894_02915	COG0728	peptidoglycan biosynthetic process
BA894_02920	COG0196	riboflavin kinase activity
BA894_02925	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
BA894_02930	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
BA894_02935	COG1047	Peptidyl-prolyl cis-trans
BA894_02940	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
BA894_02945	COG3279	Response regulator of the LytR AlgR family
BA894_02950	COG3275	phosphorelay sensor kinase activity
BA894_02955	COG1966	Carbon starvation protein
BA894_02975	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
BA894_02980	COG1472	Belongs to the glycosyl hydrolase 3 family
BA894_02985	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
BA894_02990	COG0287	Prephenate dehydrogenase
BA894_02990	COG1605	Chorismate mutase
BA894_02995	COG0739	heme binding
BA894_03000	COG0488	(ABC) transporter
BA894_03010	COG2973	This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon (5'- ACTAGT-'3') and prevents the initiation of transcription. The complex also regulates trp repressor biosynthesis by binding to its regulatory region
BA894_03015	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
BA894_03020	COG0077	Prephenate dehydratase
BA894_03020	COG1605	Chorismate mutase
BA894_03025	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
BA894_03030	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
BA894_03035	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BA894_03040	COG0564	pseudouridine synthase activity
BA894_03050	COG0542	response to heat
BA894_03065	COG1116	anion transmembrane transporter activity
BA894_03120	COG3770	Murein endopeptidase that cleaves the D-alanyl-meso-2,6- diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus
BA894_03130	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
BA894_03140	COG2974	May be involved in recombination
BA894_03150	COG0745	RESPONSE REGULATOR receiver
BA894_03155	COG5002	protein histidine kinase activity
BA894_03165	COG0248	Ppx GppA phosphatase
BA894_03170	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
BA894_03180	COG0581	inorganic phosphate transmembrane transporter activity
BA894_03185	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
BA894_03190	COG0704	Plays a role in the regulation of phosphate uptake
BA894_03200	COG3142	Participates in the control of copper homeostasis
BA894_03205	COG0450	alkyl hydroperoxide reductase
BA894_03210	COG0583	DNA-binding transcription factor activity
BA894_03215	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
BA894_03225	COG0517	IMP dehydrogenase activity
BA894_03235	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
BA894_03240	COG0343	queuine tRNA-ribosyltransferase activity
BA894_03245	COG1862	Preprotein translocase
BA894_03250	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BA894_03255	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BA894_03260	COG0483	inositol monophosphate 1-phosphatase activity
BA894_03265	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
BA894_03275	COG1104	cysteine desulfurase activity
BA894_03280	COG0822	iron-sulfur transferase activity
BA894_03295	COG0443	Heat shock 70 kDa protein
BA894_03300	COG0633	Ferredoxin
BA894_03305	COG2975	iron-sulfur cluster assembly
BA894_03310	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
BA894_03315	COG0105	UTP biosynthetic process
BA894_03330	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
BA894_03340	COG2976	Protein conserved in bacteria
BA894_03345	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BA894_03350	COG1160	GTP binding
BA894_03370	COG0517	IMP dehydrogenase activity
BA894_03370	COG0516	GMP reductase activity
BA894_03375	COG0518	GMP synthase (glutamine-hydrolyzing) activity
BA894_03375	COG0519	Catalyzes the synthesis of GMP from XMP
BA894_03380	COG1757	Na H antiporter
BA894_03385	COG1584	GPR1 FUN34 yaaH family protein
BA894_03400	COG1473	amidohydrolase
BA894_03410	COG1115	amino acid carrier protein
BA894_03415	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BA894_03425	COG2873	o-acetylhomoserine
BA894_03430	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BA894_03450	COG3153	acetyltransferase
BA894_03450	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BA894_03455	COG0583	DNA-binding transcription factor activity
BA894_03460	COG0235	Class ii aldolase
BA894_03465	COG4806	L-rhamnose isomerase
BA894_03470	COG1070	Carbohydrate kinase
BA894_03475	COG3254	rhamnose metabolic process
BA894_03505	COG4585	Histidine kinase
BA894_03510	COG2197	response regulator
BA894_03520	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
BA894_03525	COG2867	negative regulation of translational initiation
BA894_03530	COG2914	Belongs to the UPF0125 (RnfH) family
BA894_03535	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BA894_03540	COG0497	DNA recombination
BA894_03545	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
BA894_03550	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
BA894_03555	COG1301	dicarboxylic acid transport
BA894_03565	COG0484	heat shock protein binding
BA894_03600	COG0590	tRNA wobble adenosine to inosine editing
BA894_03605	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
BA894_03610	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BA894_03610	COG0047	phosphoribosylformylglycinamidine synthase activity
BA894_03635	COG2195	Cleaves the N-terminal amino acid of tripeptides
BA894_03640	COG2252	PERMEase
BA894_03645	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
BA894_03660	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
BA894_03665	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
BA894_03670	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
BA894_03675	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BA894_03675	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BA894_03700	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
BA894_03705	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
BA894_03715	COG0142	geranyltranstransferase activity
BA894_03725	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
BA894_03730	COG2885	chlorophyll binding
BA894_03735	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BA894_03735	COG0301	tRNA thio-modification
BA894_03740	COG0583	DNA-binding transcription factor activity
BA894_03750	COG2363	Small membrane protein
BA894_03755	COG2933	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
BA894_03760	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BA894_03765	COG1611	Belongs to the LOG family
BA894_03770	COG3706	GGDEF domain
BA894_03780	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
BA894_03780	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
BA894_03790	COG5595	Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310)
BA894_03795	COG1464	Belongs to the NlpA lipoprotein family
BA894_03800	COG2011	ABC-type metal ion transport system permease component
BA894_03805	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
BA894_03810	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
BA894_03820	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BA894_03820	COG1263	PTS System
BA894_03825	COG0366	Alpha amylase catalytic
BA894_03835	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
BA894_03840	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
BA894_03845	COG0321	lipoyl(octanoyl) transferase activity
BA894_03855	COG1686	Belongs to the peptidase S11 family
BA894_03860	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
BA894_03865	COG0772	Belongs to the SEDS family
BA894_03870	COG0768	penicillin binding
BA894_03880	COG0799	negative regulation of ribosome biogenesis
BA894_03885	COG1466	dna polymerase III delta subunit
BA894_03890	COG2980	Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane
BA894_03895	COG0495	leucyl-tRNA aminoacylation
BA894_03900	COG2888	peptidyl-tyrosine sulfation
BA894_03905	COG0815	Transfers the fatty acyl group on membrane lipoproteins
BA894_03910	COG4535	Mg2 and Co2 transporter CorC
BA894_03920	COG1702	phosphate starvation-inducible protein PhoH
BA894_03925	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
BA894_03930	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BA894_04040	COG0012	GTP binding
BA894_04050	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BA894_04055	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
BA894_04060	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
BA894_04065	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
BA894_04075	COG2890	protein-(glutamine-N5) methyltransferase activity
BA894_04080	COG3094	Invasion gene expression up-regulator, SirB
BA894_04085	COG2912	Transglutaminase-like superfamily
BA894_04090	COG2877	3-deoxy-8-phosphooctulonate synthase activity
BA894_04095	COG0737	Belongs to the 5'-nucleotidase family
BA894_04100	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BA894_04105	COG1187	pseudouridine synthase activity
BA894_04110	COG2840	Smr protein MutS2
BA894_04150	COG2608	mercury ion transmembrane transporter activity
BA894_04150	COG2217	Heavy metal translocating P-type atpase
BA894_04205	COG0784	Response regulator, receiver
BA894_04205	COG0835	chemotaxis
BA894_04210	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
BA894_04215	COG1815	bacterial-type flagellum-dependent cell motility
BA894_04220	COG1558	bacterial-type flagellum-dependent cell motility
BA894_04225	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
BA894_04230	COG1749	Flagellar hook protein flgE
BA894_04235	COG4787	bacterial-type flagellum-dependent cell motility
BA894_04240	COG4786	Flagellar basal body rod
BA894_04245	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
BA894_04250	COG1706	bacterial-type flagellum-dependent cell motility
BA894_04255	COG1705	Flagellar rod assembly protein muramidase FlgJ
BA894_04255	COG3951	Flagellar rod assembly protein muramidase FlgJ
BA894_04265	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BA894_04270	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BA894_04275	COG2190	(PTS) system
BA894_04280	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BA894_04285	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BA894_04290	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
BA894_04295	COG2981	High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway
BA894_04300	COG3115	cell septum assembly
BA894_04365	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BA894_04420	COG0330	HflC and HflK could
BA894_04425	COG3118	belongs to the thioredoxin family
BA894_04430	COG0300	oxidoreductase activity
BA894_04435	COG1090	epimerase
BA894_04465	COG0622	Phosphoesterase
BA894_04485	COG3710	Transcriptional regulator
BA894_04490	COG0326	Molecular chaperone. Has ATPase activity
BA894_04500	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
BA894_04505	COG3104	oligopeptide transport
BA894_04510	COG0250	Participates in transcription elongation, termination and antitermination
BA894_04515	COG0367	asparagine synthase
BA894_04520	COG4651	solute:proton antiporter activity
BA894_04520	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
BA894_04525	COG1846	Transcriptional regulator
BA894_04525	COG1940	carbohydrate kinase activity
BA894_04530	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
BA894_04535	COG1263	PTS System
BA894_04535	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BA894_04535	COG2190	(PTS) system
BA894_04555	COG0735	belongs to the Fur family
BA894_04565	COG0716	FMN binding
BA894_04575	COG0596	Alpha beta hydrolase
BA894_04585	COG0033	Phosphoglucomutase
BA894_04595	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
BA894_04615	COG2009	succinate dehydrogenase
BA894_04620	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
BA894_04625	COG1053	succinate dehydrogenase
BA894_04635	COG0567	Dehydrogenase, E1 component
BA894_04640	COG0508	dehydrogenase complex catalyzes the overall conversion of
BA894_04645	COG0045	succinate-CoA ligase (ADP-forming) activity
BA894_04655	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BA894_04660	COG1121	(ABC) transporter
BA894_04665	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
BA894_04670	COG4977	sequence-specific DNA binding
BA894_04675	COG1918	ferrous iron import across plasma membrane
BA894_04695	COG0018	arginyl-trna synthetase
BA894_04700	COG3102	Protein conserved in bacteria
BA894_04715	COG0788	formyltetrahydrofolate deformylase activity
BA894_04720	COG1199	ATP-dependent helicase activity
BA894_04725	COG1214	PFAM Peptidase M22, glycoprotease
BA894_04740	COG2267	carboxylic ester hydrolase activity
BA894_04745	COG0318	PFAM AMP-dependent synthetase and ligase
BA894_04750	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
BA894_04755	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
BA894_04760	COG2894	cell division
BA894_04775	COG2951	lytic endotransglycosylase activity
BA894_04780	COG0583	DNA-binding transcription factor activity
BA894_04785	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BA894_04790	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
BA894_04800	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
BA894_04895	COG2963	transposase activity
BA894_04900	COG2801	Transposase and inactivated derivatives
BA894_04910	COG2801	Transposase and inactivated derivatives
BA894_04920	COG1028	Short-chain dehydrogenase reductase Sdr
BA894_04930	COG1169	isochorismate synthase
BA894_04935	COG1021	2,3-dihydroxybenzoate-AMP ligase
BA894_04940	COG3433	isochorismatase activity
BA894_04940	COG1535	isochorismatase
BA894_04945	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BA894_04945	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BA894_04960	COG4771	TonB-dependent receptor
BA894_04965	COG1253	flavin adenine dinucleotide binding
BA894_04970	COG0513	Belongs to the DEAD box helicase family
BA894_04975	COG0569	domain protein
BA894_04980	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
BA894_04990	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
BA894_04995	COG0745	RESPONSE REGULATOR receiver
BA894_05015	COG0395	ABC-type sugar transport system, permease component
BA894_05020	COG3842	ATPase activity
BA894_05025	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BA894_05030	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
BA894_05035	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
BA894_05045	COG2204	response regulator
BA894_05070	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
BA894_05075	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
BA894_05080	COG0776	regulation of translation
BA894_05085	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BA894_05090	COG1555	photosystem II stabilization
BA894_05105	COG0232	Belongs to the dGTPase family. Type 2 subfamily
BA894_05185	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
BA894_05195	COG0436	Aminotransferase
BA894_05200	COG1169	isochorismate synthase
BA894_05205	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
BA894_05210	COG0596	Alpha beta hydrolase
BA894_05215	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
BA894_05220	COG1441	menaquinone biosynthetic process
BA894_05235	COG2855	membrane
BA894_05240	COG0477	Major facilitator Superfamily
BA894_05280	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BA894_05285	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BA894_05300	COG1522	sequence-specific DNA binding
BA894_05305	COG1946	Acyl-CoA thioesterase
BA894_05310	COG3126	Type III secretion system lipoprotein chaperone (YscW)
BA894_05330	COG0583	DNA-binding transcription factor activity
BA894_05340	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BA894_05345	COG0174	glutamine synthetase
BA894_05350	COG0174	glutamine synthetase
BA894_05360	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
BA894_05365	COG3842	ATPase activity
BA894_05370	COG1176	ABC-type spermidine putrescine transport system, permease component I
BA894_05375	COG1177	transmembrane transport
BA894_05385	COG1012	belongs to the aldehyde dehydrogenase family
BA894_05390	COG0519	Catalyzes the synthesis of GMP from XMP
BA894_05395	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BA894_05400	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
BA894_05405	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
BA894_05410	COG0517	IMP dehydrogenase activity
BA894_05410	COG0516	GMP reductase activity
BA894_05435	COG0537	adenosine 5'-monophosphoramidase activity
BA894_05460	COG3150	esterase
BA894_05465	COG1252	NADH dehydrogenase
BA894_05480	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
BA894_05490	COG4591	ABC-type transport system involved in lipoprotein release permease component
BA894_05495	COG1136	(ABC) transporter
BA894_05500	COG4591	ABC-type transport system involved in lipoprotein release permease component
BA894_05510	COG0658	competence protein
BA894_05510	COG2333	competence protein COMEC
BA894_05515	COG1132	(ABC) transporter
BA894_05530	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
BA894_05535	COG2719	SpoVR family
BA894_05540	COG2718	Belongs to the UPF0229 family
BA894_05545	COG2766	serine protein kinase
BA894_05550	COG3013	Belongs to the UPF0304 family
BA894_05560	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BA894_05570	COG1882	Formate acetyltransferase
BA894_05595	COG4215	(ABC) transporter
BA894_05605	COG0708	Exodeoxyribonuclease III
BA894_05615	COG0583	DNA-binding transcription factor activity
BA894_05625	COG1346	cytolysis
BA894_05635	COG3923	Primosomal replication protein n
BA894_05640	COG0730	response to heat
BA894_05645	COG1199	ATP-dependent helicase activity
BA894_05655	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
BA894_05660	COG1187	pseudouridine synthase activity
BA894_05670	COG1278	Cold shock
BA894_05675	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
BA894_05680	COG0542	response to heat
BA894_05685	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
BA894_05690	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
BA894_05695	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
BA894_05705	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
BA894_05715	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BA894_05720	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
BA894_05725	COG0297	glycogen (starch) synthase activity
BA894_05745	COG3070	regulator of competence-specific genes
BA894_05750	COG1609	Transcriptional regulator
BA894_05755	COG3381	protein complex oligomerization
BA894_05760	COG0745	RESPONSE REGULATOR receiver
BA894_05765	COG1434	Gram-negative-bacterium-type cell wall biogenesis
BA894_05770	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
BA894_05775	COG3006	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Not required for mini-F plasmid partitioning. Probably acts via its interaction with MukB and MukE. Overexpression results in anucleate cells. It has a calcium binding activity
BA894_05780	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
BA894_05785	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
BA894_05815	COG4067	protein conserved in archaea
BA894_05815	COG0189	ligase activity
BA894_05820	COG0500	methyltransferase
BA894_05825	COG4106	trans-aconitate 2-methyltransferase activity
BA894_05830	COG1801	Protein of unknown function DUF72
BA894_05840	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
BA894_05845	COG0632	four-way junction helicase activity
BA894_05850	COG2255	four-way junction helicase activity
BA894_05855	COG1271	oxidase subunit
BA894_05860	COG1294	oxidase, subunit
BA894_05865	COG4890	Cyd operon protein YbgT
BA894_05875	COG0824	Thioesterase
BA894_05880	COG0811	peptide transport
BA894_05895	COG0823	Involved in the tonB-independent uptake of proteins
BA894_05900	COG2885	chlorophyll binding
BA894_05905	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
BA894_05910	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
BA894_05920	COG3766	membrane
BA894_05930	COG0754	glutathionylspermidine amidase activity
BA894_05940	COG0784	Response regulator, receiver
BA894_05940	COG5002	protein histidine kinase activity
BA894_06020	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
BA894_06025	COG1396	sequence-specific DNA binding
BA894_06030	COG3135	benzoate transporter
BA894_06035	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BA894_06040	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BA894_06075	COG0686	Belongs to the AlaDH PNT family
BA894_06085	COG1674	ftsk spoiiie
BA894_06090	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
BA894_06095	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
BA894_06105	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BA894_06110	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
BA894_06115	COG0156	8-amino-7-oxononanoate synthase activity
BA894_06125	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
BA894_06130	COG0501	Belongs to the peptidase M48B family
BA894_06140	COG4221	oxidoreductase activity
BA894_06155	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
BA894_06175	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
BA894_06185	COG0482	sulfurtransferase activity
BA894_06195	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BA894_06205	COG1757	Na H antiporter
BA894_06220	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
BA894_06225	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
BA894_06230	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
BA894_06235	COG0131	Imidazoleglycerol-phosphate dehydratase
BA894_06235	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
BA894_06240	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
BA894_06245	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
BA894_06250	COG0107	imidazoleglycerol-phosphate synthase activity
BA894_06255	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
BA894_06255	COG0140	phosphoribosyl-ATP diphosphatase activity
BA894_06260	COG3012	SEC-C Motif Domain Protein
BA894_06265	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
BA894_06270	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
BA894_06275	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
BA894_06280	COG0215	cysteine-tRNA ligase activity
BA894_06285	COG1435	thymidine kinase activity
BA894_06290	COG1434	Gram-negative-bacterium-type cell wall biogenesis
BA894_06305	COG2116	formate transmembrane transporter activity
BA894_06310	COG0390	transport system, permease component
BA894_06315	COG4459	periplasmic nitrate reductase
BA894_06320	COG3005	denitrification pathway
BA894_06325	COG0243	molybdopterin cofactor binding
BA894_06340	COG1227	inorganic diphosphatase activity
BA894_06350	COG4172	Belongs to the ABC transporter superfamily
BA894_06360	COG4171	peptide transport system, permease
BA894_06365	COG4168	peptide transport system, permease
BA894_06375	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
BA894_06380	COG1842	Phage shock protein A
BA894_06390	COG1983	PspC domain protein
BA894_06410	COG2818	Glycosylase
BA894_06415	COG0626	cystathionine gamma-synthase activity
BA894_06425	COG0733	neurotransmitter:sodium symporter activity
BA894_06430	COG0564	pseudouridine synthase activity
BA894_06440	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BA894_06445	COG1151	hydroxylamine reductase activity
BA894_06450	COG3604	Transcriptional regulator
BA894_06460	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
BA894_06465	COG4136	ATPase activity
BA894_06470	COG4135	transport system, permease component
BA894_06475	COG4134	Bacterial extracellular solute-binding protein
BA894_06485	COG3313	Fe-S protein
BA894_06500	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
BA894_06505	COG0642	Histidine kinase
BA894_06510	COG0745	RESPONSE REGULATOR receiver
BA894_06520	COG1061	Type III restriction enzyme res subunit
BA894_06525	COG1187	pseudouridine synthase activity
BA894_06530	COG2814	Major facilitator Superfamily
BA894_06560	COG3005	denitrification pathway
BA894_06565	COG0702	epimerase
BA894_06570	COG0534	Mate efflux family protein
BA894_06575	COG1136	(ABC) transporter
BA894_06590	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
BA894_06600	COG1960	acyl-CoA dehydrogenase activity
BA894_06605	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
BA894_06610	COG3273	potassium ion transport
BA894_06610	COG2985	domain, Protein
BA894_06615	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
BA894_06620	COG1454	alcohol dehydrogenase
BA894_06620	COG1012	belongs to the aldehyde dehydrogenase family
BA894_06625	COG1737	Transcriptional regulator
BA894_06630	COG0076	glutamate decarboxylase activity
BA894_06640	COG2431	L-lysine efflux transmembrane transporter activity
BA894_06650	COG3070	regulator of competence-specific genes
BA894_06665	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BA894_06665	COG4191	Histidine kinase
BA894_06675	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
BA894_06685	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
BA894_06690	COG4988	ABC transporter
BA894_06695	COG0492	ferredoxin-NADP+ reductase activity
BA894_06715	COG0471	metal ion transport
BA894_06720	COG2949	membrane
BA894_06725	COG0281	malic enzyme
BA894_06730	COG1643	Atp-dependent helicase
BA894_06745	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
BA894_06780	COG0277	FAD linked oxidase domain protein
BA894_06780	COG0247	lactate metabolic process
BA894_06785	COG2020	methyltransferase activity
BA894_06790	COG0583	DNA-binding transcription factor activity
BA894_06795	COG3384	dioxygenase
BA894_06800	COG0435	Glutathione S-transferase
BA894_06810	COG0010	Belongs to the arginase family
BA894_06815	COG1228	amidohydrolase
BA894_06835	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
BA894_06845	COG0291	Belongs to the bacterial ribosomal protein bL35 family
BA894_06860	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
BA894_06865	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BA894_06865	COG0072	phenylalanine-tRNA ligase activity
BA894_06870	COG1621	beta-fructofuranosidase activity
BA894_06875	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BA894_06895	COG0776	regulation of translation
BA894_06905	COG0500	methyltransferase
BA894_06910	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
BA894_06915	COG0295	cytidine deaminase activity
BA894_06920	COG1346	cytolysis
BA894_06925	COG1380	Effector of murein hydrolase LrgA
BA894_06930	COG2925	Exonuclease
BA894_06945	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
BA894_06965	COG0702	epimerase
BA894_06970	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
BA894_06980	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
BA894_07000	COG2988	succinylglutamate desuccinylase activity
BA894_07005	COG4139	cobalamin transport
BA894_07030	COG0583	DNA-binding transcription factor activity
BA894_07040	COG1451	nucleotide metabolic process
BA894_07045	COG3129	Specifically methylates the adenine in position 1618 of 23S rRNA
BA894_07105	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
BA894_07110	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BA894_07125	COG2195	Cleaves the N-terminal amino acid of tripeptides
BA894_07135	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
BA894_07145	COG0625	glutathione transferase activity
BA894_07170	COG4145	pantothenate transmembrane transporter activity
BA894_07175	COG3924	membrane
BA894_07195	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
BA894_07205	COG1349	DNA-binding transcription factor activity
BA894_07210	COG0561	phosphatase activity
BA894_07215	COG4785	May be involved in cell division
BA894_07225	COG0579	oxidoreductase
BA894_07235	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
BA894_07350	COG1953	Uracil, thiamine, allantoin
BA894_07365	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
BA894_07380	COG2059	Chromate
BA894_07385	COG2059	Chromate
BA894_07415	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BA894_07425	COG1414	Transcriptional regulator
BA894_07430	COG0400	carboxylic ester hydrolase activity
BA894_07440	COG5002	protein histidine kinase activity
BA894_07440	COG0784	Response regulator, receiver
BA894_07440	COG2198	Histidine kinase
BA894_07450	COG0559	Belongs to the binding-protein-dependent transport system permease family
BA894_07470	COG0829	nickel cation binding
BA894_07475	COG0831	urea catabolic process
BA894_07480	COG0832	Belongs to the urease beta subunit family
BA894_07485	COG0804	urea catabolic process
BA894_07495	COG0830	nickel cation binding
BA894_07500	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
BA894_07510	COG0471	metal ion transport
BA894_07515	COG4191	Histidine kinase
BA894_07515	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BA894_07535	COG0814	amino acid
BA894_07560	COG1132	(ABC) transporter
BA894_07575	COG0443	Heat shock 70 kDa protein
BA894_07580	COG0443	Heat shock 70 kDa protein
BA894_07615	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
BA894_07620	COG1643	Atp-dependent helicase
BA894_07635	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BA894_07645	COG1793	dna ligase
BA894_07655	COG0534	Mate efflux family protein
BA894_07660	COG0307	riboflavin synthase, alpha
BA894_07680	COG3706	GGDEF domain
BA894_07690	COG0791	NLP P60 protein
BA894_07695	COG0840	transmembrane signaling receptor activity
BA894_07715	COG1940	carbohydrate kinase activity
BA894_07730	COG0303	'Molybdopterin
BA894_07740	COG3842	ATPase activity
BA894_07755	COG2204	response regulator
BA894_07760	COG4191	Histidine kinase
BA894_07765	COG0488	(ABC) transporter
BA894_07770	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
BA894_07800	COG0243	molybdopterin cofactor binding
BA894_07800	COG3383	formate dehydrogenase (NAD+) activity
BA894_07805	COG0437	4 iron, 4 sulfur cluster binding
BA894_07820	COG0110	maltose O-acetyltransferase activity
BA894_07825	COG2207	Transcriptional regulator
BA894_07830	COG0534	Mate efflux family protein
BA894_07835	COG0004	ammonium transporteR
BA894_07840	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
BA894_07845	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
BA894_07850	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
BA894_07855	COG1177	transmembrane transport
BA894_07860	COG1176	ABC-type spermidine putrescine transport system, permease component I
BA894_07865	COG3842	ATPase activity
BA894_07880	COG0037	tRNA processing
BA894_07885	COG0589	response to stress
BA894_07890	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BA894_07905	COG2217	Heavy metal translocating P-type atpase
BA894_07915	COG2010	Cytochrome c
BA894_07930	COG3278	Belongs to the heme-copper respiratory oxidase family
BA894_08000	COG3120	sequence-specific DNA binding
BA894_08005	COG1067	ATP-dependent peptidase activity
BA894_08010	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
BA894_08035	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
BA894_08035	COG0116	Belongs to the methyltransferase superfamily
BA894_08045	COG0167	dihydroorotate dehydrogenase activity
BA894_08050	COG2902	Dehydrogenase
BA894_08055	COG0308	aminopeptidase N
BA894_08070	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
BA894_08075	COG1956	GAF domain-containing protein
BA894_08080	COG1132	(ABC) transporter
BA894_08085	COG2995	paraquat-inducible protein a
BA894_08090	COG3008	intermembrane lipid transfer
BA894_08095	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
BA894_08095	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
BA894_08115	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
BA894_08120	COG1666	GTP binding
BA894_08135	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BA894_08140	COG4597	amino acid ABC transporter
BA894_08145	COG0765	amino acid transport
BA894_08150	COG1126	abc transporter atp-binding protein
BA894_08155	COG0670	Belongs to the BI1 family
BA894_08165	COG2920	part of a sulfur-relay system
BA894_08170	COG1254	Belongs to the acylphosphatase family
BA894_08175	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
BA894_08190	COG2885	chlorophyll binding
BA894_08200	COG3706	GGDEF domain
BA894_08210	COG0602	queuosine metabolic process
BA894_08215	COG0561	phosphatase activity
BA894_08225	COG0110	maltose O-acetyltransferase activity
BA894_08270	COG1051	belongs to the nudix hydrolase family
BA894_08285	COG2828	Protein conserved in bacteria
BA894_08295	COG0372	Belongs to the citrate synthase family
BA894_08300	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
BA894_08325	COG0730	response to heat
BA894_08335	COG1012	belongs to the aldehyde dehydrogenase family
BA894_08340	COG3284	Transcriptional regulator
BA894_08350	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
BA894_08355	COG0363	glucosamine-6-phosphate deaminase activity
BA894_08360	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
BA894_08370	COG4774	siderophore transport
BA894_08375	COG4565	transcriptional regulatory protein
BA894_08380	COG3290	protein histidine kinase activity
BA894_08395	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BA894_08410	COG0527	aspartate kinase activity
BA894_08420	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
BA894_08425	COG0456	acetyltransferase
BA894_08435	COG4176	ABC-type proline glycine betaine transport system permease component
BA894_08440	COG2113	Glycine betaine
BA894_08450	COG1022	Amp-dependent synthetase and ligase
BA894_08460	COG4221	oxidoreductase activity
BA894_08470	COG0745	RESPONSE REGULATOR receiver
BA894_08475	COG0642	Histidine kinase
BA894_08480	COG1368	sulfuric ester hydrolase activity
BA894_08495	COG1404	Belongs to the peptidase S8 family
BA894_08515	COG0583	DNA-binding transcription factor activity
BA894_08520	COG1115	amino acid carrier protein
BA894_08535	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BA894_08540	COG1280	lysine exporter protein (LysE YggA)
BA894_08545	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
BA894_08550	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
BA894_08555	COG1289	transmembrane transporter activity
BA894_08570	COG1560	Kdo2-lipid A biosynthetic process
BA894_08580	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
BA894_08585	COG3063	Type IV pilus biogenesis stability protein PilW
BA894_08615	COG2315	Protein conserved in bacteria
BA894_08620	COG1846	Transcriptional regulator
BA894_08625	COG0697	spore germination
BA894_08630	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
BA894_08635	COG1012	belongs to the aldehyde dehydrogenase family
BA894_08640	COG2957	Belongs to the agmatine deiminase family
BA894_08650	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BA894_08655	COG1012	belongs to the aldehyde dehydrogenase family
BA894_08660	COG1917	Cupin 2, conserved barrel domain protein
BA894_08660	COG1396	sequence-specific DNA binding
BA894_08665	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
BA894_08670	COG0174	glutamine synthetase
BA894_08675	COG1757	Na H antiporter
BA894_08705	COG2824	Alkylphosphonate utilization operon protein PhnA
BA894_08710	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
BA894_08740	COG0346	lactoylglutathione lyase activity
BA894_08770	COG1794	racemase activity, acting on amino acids and derivatives
BA894_08790	COG0724	RNA recognition motif
BA894_08825	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
BA894_08835	COG4656	Part of a membrane complex involved in electron transport
BA894_08840	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BA894_08860	COG4820	ethanolamine utilization protein (EutJ)
BA894_08865	COG4869	propanediol catabolic process
BA894_08880	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
BA894_08890	COG2207	Transcriptional regulator
BA894_08895	COG2972	Histidine kinase
BA894_08910	COG0745	RESPONSE REGULATOR receiver
BA894_08915	COG5002	protein histidine kinase activity
BA894_08915	COG5000	phosphorelay sensor kinase activity
BA894_08940	COG1454	alcohol dehydrogenase
BA894_08945	COG2610	gluconate transmembrane transporter activity
BA894_08955	COG3718	enzyme involved in inositol metabolism
BA894_08965	COG0673	inositol 2-dehydrogenase activity
BA894_08970	COG2814	Major facilitator Superfamily
BA894_08970	COG0477	Major facilitator Superfamily
BA894_08975	COG1082	Xylose isomerase domain protein TIM barrel
BA894_08985	COG1082	Xylose isomerase domain protein TIM barrel
BA894_08995	COG1454	alcohol dehydrogenase
BA894_08995	COG1012	belongs to the aldehyde dehydrogenase family
BA894_09000	COG3962	Belongs to the TPP enzyme family
BA894_09005	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BA894_09020	COG2999	glutathione oxidoreductase activity
BA894_09045	COG0477	Major facilitator Superfamily
BA894_09045	COG2814	Major facilitator Superfamily
BA894_09050	COG0673	inositol 2-dehydrogenase activity
BA894_09055	COG1082	Xylose isomerase domain protein TIM barrel
BA894_09075	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
BA894_09075	COG2885	chlorophyll binding
BA894_09095	COG4999	Histidine kinase
BA894_09095	COG2205	protein histidine kinase activity
BA894_09095	COG3850	Histidine kinase
BA894_09095	COG3437	response regulator, receiver
BA894_09100	COG2204	response regulator
BA894_09140	COG3206	protein involved in exopolysaccharide biosynthesis
BA894_09140	COG0489	protein tyrosine kinase activity
BA894_09145	COG0297	glycogen (starch) synthase activity
BA894_09155	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
BA894_09170	COG1683	Conserved Protein
BA894_09175	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BA894_09175	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
BA894_09185	COG5492	domain, Protein
BA894_09260	COG0582	viral genome integration into host DNA
BA894_09265	COG1280	lysine exporter protein (LysE YggA)
BA894_09300	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BA894_09310	COG3768	UPF0283 membrane protein
BA894_09315	COG3106	COG3106 Predicted ATPase
BA894_09330	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
BA894_09340	COG0814	amino acid
BA894_09345	COG1760	l-serine dehydratase
BA894_09350	COG0720	synthase
BA894_09355	COG0017	Asparaginyl-tRNA synthetase
BA894_09365	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BA894_09375	COG1448	Aminotransferase
BA894_09390	COG2176	DNA-directed DNA polymerase activity
BA894_09395	COG0840	transmembrane signaling receptor activity
BA894_09400	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BA894_09405	COG1846	Transcriptional regulator
BA894_09430	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
BA894_09445	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BA894_09450	COG3108	Peptidase M15
BA894_09455	COG2989	Protein conserved in bacteria
BA894_09480	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
BA894_09490	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
BA894_09495	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BA894_09500	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BA894_09510	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BA894_09540	COG0019	diaminopimelate decarboxylase activity
BA894_09580	COG0322	excinuclease ABC activity
BA894_09585	COG2197	response regulator
BA894_09590	COG0417	DNA replication proofreading
BA894_09600	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
BA894_09605	COG3099	Belongs to the UPF0263 family
BA894_09610	COG1187	pseudouridine synthase activity
BA894_09620	COG0009	L-threonylcarbamoyladenylate synthase
BA894_09625	COG0613	PHP domain protein
BA894_09635	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
BA894_09640	COG0512	Glutamine amidotransferase of anthranilate synthase
BA894_09645	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
BA894_09650	COG0134	indole-3-glycerol-phosphate synthase activity
BA894_09650	COG0135	phosphoribosylanthranilate isomerase activity
BA894_09655	COG0133	tryptophan synthase activity
BA894_09660	COG0159	tryptophan synthase activity
BA894_09665	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BA894_09670	COG0318	PFAM AMP-dependent synthetase and ligase
BA894_09675	COG1301	dicarboxylic acid transport
BA894_09700	COG1607	acyl-coa hydrolase
BA894_09705	COG2350	Protein conserved in bacteria
BA894_09715	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
BA894_09720	COG0583	DNA-binding transcription factor activity
BA894_09735	COG5001	Diguanylate cyclase
BA894_09740	COG1032	radical SAM domain protein
BA894_09745	COG0745	RESPONSE REGULATOR receiver
BA894_09750	COG3850	Histidine kinase
BA894_09750	COG5002	protein histidine kinase activity
BA894_09785	COG3118	belongs to the thioredoxin family
BA894_09790	COG4232	protein-disulfide reductase activity
BA894_09800	COG0189	ligase activity
BA894_09805	COG1773	rubredoxin
BA894_09805	COG0426	domain, Protein
BA894_09810	COG3706	GGDEF domain
BA894_09810	COG0745	RESPONSE REGULATOR receiver
BA894_09815	COG2308	Evidence 4 Homologs of previously reported genes of
BA894_09830	COG2308	Evidence 4 Homologs of previously reported genes of
BA894_09830	COG2307	Protein conserved in bacteria
BA894_09865	COG2863	cytochrome
BA894_09870	COG3258	Cytochrome c
BA894_09875	COG2995	paraquat-inducible protein a
BA894_09880	COG3008	intermembrane lipid transfer
BA894_09880	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
BA894_09885	COG3009	Protein conserved in bacteria
BA894_09890	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
BA894_09915	COG4166	transmembrane transport
BA894_09925	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
BA894_09930	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
BA894_09940	COG0539	negative regulation of cytoplasmic translation
BA894_09945	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
BA894_09950	COG0616	signal peptide processing
BA894_09955	COG1028	Short-chain dehydrogenase reductase Sdr
BA894_09970	COG0587	DNA-directed DNA polymerase activity
BA894_09975	COG1940	carbohydrate kinase activity
BA894_09980	COG0469	pyruvate kinase activity
BA894_09985	COG4667	esterase of the alpha-beta hydrolase superfamily
BA894_09995	COG0733	neurotransmitter:sodium symporter activity
BA894_10005	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BA894_10005	COG1263	PTS System
BA894_10015	COG2190	(PTS) system
BA894_10015	COG1263	PTS System
BA894_10015	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BA894_10020	COG0084	hydrolase, TatD family'
BA894_10025	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
BA894_10030	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
BA894_10035	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
BA894_10065	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BA894_10070	COG0416	fatty acid biosynthetic process
BA894_10080	COG1399	metal-binding, possibly nucleic acid-binding protein
BA894_10085	COG0424	maF-like protein
BA894_10090	COG0564	pseudouridine synthase activity
BA894_10095	COG1530	ribonuclease E activity
BA894_10100	COG0659	secondary active sulfate transmembrane transporter activity
BA894_10105	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BA894_10110	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
BA894_10120	COG0572	uridine kinase
BA894_10125	COG0489	protein tyrosine kinase activity
BA894_10130	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BA894_10130	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BA894_10140	COG2186	Transcriptional regulator
BA894_10145	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
BA894_10150	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
BA894_10155	COG0653	protein targeting
BA894_10160	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BA894_10165	COG2203	Gaf domain
BA894_10165	COG2199	diguanylate cyclase activity
BA894_10170	COG0366	Alpha amylase catalytic
BA894_10175	COG1122	ATPase activity
BA894_10180	COG4120	Belongs to the binding-protein-dependent transport system permease family
BA894_10190	COG3092	negative regulation of chromosome organization
BA894_10195	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BA894_10200	COG0280	phosphate acetyltransferase
BA894_10200	COG0857	belongs to the CobB CobQ family
BA894_10205	COG3174	membrane
BA894_10210	COG0435	Glutathione S-transferase
BA894_10220	COG0444	Belongs to the ABC transporter superfamily
BA894_10225	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BA894_10230	COG0601	transmembrane transport
BA894_10240	COG0314	molybdopterin synthase activity
BA894_10245	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
BA894_10250	COG0315	cyclic pyranopterin monophosphate synthase activity
BA894_10255	COG0521	Mo-molybdopterin cofactor biosynthetic process
BA894_10260	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
BA894_10265	COG0391	Required for morphogenesis under gluconeogenic growth conditions
BA894_10270	COG2198	Histidine kinase
BA894_10275	COG2204	response regulator
BA894_10280	COG0556	nucleotide-excision repair
BA894_10335	COG4387	Mu-like prophage protein GP36
BA894_10345	COG4397	Mu-like prophage major head subunit gpT
BA894_10355	COG4388	Caudovirus prohead serine protease
BA894_10385	COG4383	Mu-like prophage protein gp29
BA894_10390	COG4373	Mu-like prophage FluMu protein gp28
BA894_10400	COG0640	Transcriptional regulator
BA894_10425	COG5566	PFAM Mor transcription activator
BA894_10445	COG4382	Mu-like prophage protein Gp16
BA894_10520	COG4657	Part of a membrane complex involved in electron transport
BA894_10525	COG2878	Part of a membrane complex involved in electron transport
BA894_10530	COG4656	Part of a membrane complex involved in electron transport
BA894_10535	COG4658	electron transport chain
BA894_10540	COG4659	FMN binding
BA894_10545	COG4660	Part of a membrane complex involved in electron transport
BA894_10550	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
BA894_10555	COG0346	lactoylglutathione lyase activity
BA894_10565	COG2885	chlorophyll binding
BA894_10570	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BA894_10575	COG2056	Na+-H+ antiporter family
BA894_10585	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
BA894_10600	COG1028	Short-chain dehydrogenase reductase Sdr
BA894_10605	COG1454	alcohol dehydrogenase
BA894_10605	COG1012	belongs to the aldehyde dehydrogenase family
BA894_10610	COG2095	MarC family integral membrane protein
BA894_10615	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BA894_10620	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BA894_10625	COG1757	Na H antiporter
BA894_10660	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BA894_10680	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
BA894_10705	COG3081	Nucleoid-associated protein
BA894_10710	COG3082	Protein of unknown function (DUF1414)
BA894_10725	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
BA894_10735	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BA894_10740	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BA894_10745	COG1120	ATPase activity
BA894_10750	COG1522	sequence-specific DNA binding
BA894_10755	COG0626	cystathionine gamma-synthase activity
BA894_10760	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BA894_10765	COG0765	amino acid transport
BA894_10775	COG0123	including yeast histone deacetylase and acetoin utilization protein
BA894_10785	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BA894_10790	COG0778	Nitroreductase
BA894_10795	COG0446	pyridine nucleotide-disulphide oxidoreductase
BA894_10795	COG1902	pentaerythritol trinitrate reductase activity
BA894_10800	COG0616	signal peptide processing
BA894_10805	COG0252	asparaginase activity
BA894_10810	COG3139	Protein of unknown function (DUF1315)
BA894_10820	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BA894_10825	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
BA894_10835	COG2226	methyltransferase
BA894_10850	COG1785	Belongs to the alkaline phosphatase family
BA894_10855	COG0668	transmembrane transport
BA894_10865	COG2261	transglycosylase associated protein
BA894_10875	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
BA894_10880	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
BA894_10885	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
BA894_10895	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
BA894_10900	COG2832	Protein of unknown function (DUF454)
BA894_10905	COG0745	RESPONSE REGULATOR receiver
BA894_10910	COG0583	DNA-binding transcription factor activity
BA894_10915	COG5492	domain, Protein
BA894_10920	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
BA894_10925	COG1286	toxin biosynthetic process
BA894_10930	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
BA894_10935	COG0285	dihydrofolate synthase activity
BA894_10940	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
BA894_10945	COG0101	tRNA pseudouridine synthase activity
BA894_10955	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BA894_10960	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BA894_10965	COG0747	negative chemotaxis
BA894_10970	COG1349	DNA-binding transcription factor activity
BA894_10980	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BA894_10985	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BA894_10985	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
BA894_10990	COG0431	NADPH-dependent FMN reductase
BA894_11000	COG3101	peptidyl-lysine hydroxylation
BA894_11005	COG2860	membrane
BA894_11010	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
BA894_11015	COG2890	protein-(glutamine-N5) methyltransferase activity
BA894_11020	COG2840	Smr protein MutS2
BA894_11025	COG2062	phosphohistidine phosphatase, SixA
BA894_11040	COG1024	Enoyl-CoA hydratase
BA894_11040	COG1250	3-hydroxyacyl-CoA dehydrogenase
BA894_11045	COG0183	Belongs to the thiolase family
BA894_11065	COG2067	long-chain fatty acid transport protein
BA894_11085	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BA894_11090	COG1138	Cytochrome C-type biogenesis protein
BA894_11095	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
BA894_11100	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BA894_11105	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BA894_11110	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BA894_11115	COG4133	protoheme IX ABC transporter activity
BA894_11125	COG0835	chemotaxis
BA894_11135	COG1192	Involved in chromosome partitioning
BA894_11140	COG2201	protein-glutamate methylesterase activity
BA894_11145	COG2198	Histidine kinase
BA894_11145	COG0643	Histidine kinase
BA894_11150	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
BA894_11165	COG0455	bacterial-type flagellum organization
BA894_11190	COG1987	bacterial-type flagellum assembly
BA894_11240	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BA894_11250	COG1677	Flagellar hook-basal body complex protein FliE
BA894_11255	COG2204	response regulator
BA894_11260	COG4191	Histidine kinase
BA894_11275	COG1516	flagellar protein fliS
BA894_11285	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
BA894_11290	COG1334	flagellar protein FlaG
BA894_11295	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BA894_11300	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BA894_11305	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BA894_11310	COG2837	iron assimilation
BA894_11335	COG1393	Belongs to the ArsC family
BA894_11340	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BA894_11355	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
BA894_11360	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BA894_11365	COG2716	regulation of RNA biosynthetic process
BA894_11395	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
BA894_11455	COG0625	glutathione transferase activity
BA894_11495	COG0789	Transcriptional regulator
BA894_11500	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BA894_11510	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BA894_11530	COG4783	chaperone-mediated protein folding
BA894_11535	COG1393	Belongs to the ArsC family
BA894_11555	COG2233	PERMEase
BA894_11560	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
BA894_11565	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
BA894_11570	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
BA894_11575	COG0121	glutamine amidotransferase
BA894_11580	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
BA894_11585	COG1960	acyl-CoA dehydrogenase activity
BA894_11600	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BA894_11605	COG0328	RNA-DNA hybrid ribonuclease activity
BA894_11610	COG2226	methyltransferase
BA894_11615	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BA894_11620	COG0741	lytic transglycosylase activity
BA894_11620	COG1388	LysM domain
BA894_11630	COG3021	interspecies interaction between organisms
BA894_11635	COG0347	Belongs to the P(II) protein family
BA894_11645	COG0037	tRNA processing
BA894_11650	COG0825	malonyl-CoA metabolic process
BA894_11655	COG0587	DNA-directed DNA polymerase activity
BA894_11665	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
BA894_11670	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
BA894_11680	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
BA894_11685	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
BA894_11695	COG0750	zinc metalloprotease
BA894_11700	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
BA894_11705	COG0575	Belongs to the CDS family
BA894_11710	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
BA894_11715	COG0233	cytoplasmic translational termination
BA894_11720	COG0528	UMP kinase activity
BA894_11725	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
BA894_11730	COG0052	Belongs to the universal ribosomal protein uS2 family
BA894_11735	COG0024	Methionine aminopeptidase
BA894_11740	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
BA894_11750	COG0564	pseudouridine synthase activity
BA894_11780	COG1671	Belongs to the UPF0178 family
BA894_11785	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
BA894_11795	COG0254	rRNA binding
BA894_11800	COG1720	tRNA m6t6A37 methyltransferase activity
BA894_11820	COG0733	neurotransmitter:sodium symporter activity
BA894_11830	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BA894_11835	COG0514	ATP-dependent DNA helicase (RecQ)
BA894_11840	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BA894_11850	COG2991	Protein conserved in bacteria
BA894_11855	COG1477	protein flavinylation
BA894_11860	COG2871	sodium ion transport
BA894_11865	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
BA894_11870	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
BA894_11880	COG1805	sodium ion transport
BA894_11885	COG1726	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
BA894_11890	COG0271	Belongs to the BolA IbaG family
BA894_11895	COG2813	Specifically methylates the guanine in position
BA894_11920	COG1595	DNA-templated transcription, initiation
BA894_11935	COG3248	Nucleoside-binding outer membrane protein
BA894_11940	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
BA894_11945	COG0693	protein deglycase activity
BA894_11950	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
BA894_11955	COG3706	GGDEF domain
BA894_11960	COG2166	iron-sulfur cluster assembly
BA894_11965	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
BA894_11970	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
BA894_11980	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
BA894_11980	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
BA894_11985	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
BA894_11990	COG1074	ATP-dependent DNA helicase activity
BA894_12000	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
BA894_12020	COG3141	response to X-ray
BA894_12030	COG2171	N-acyltransferase activity
BA894_12035	COG0584	glycerophosphoryl diester phosphodiesterase
BA894_12040	COG2271	Major facilitator Superfamily
BA894_12045	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
BA894_12050	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
BA894_12055	COG1349	DNA-binding transcription factor activity
BA894_12060	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
BA894_12085	COG1609	Transcriptional regulator
BA894_12090	COG1609	Transcriptional regulator
BA894_12095	COG0583	DNA-binding transcription factor activity
BA894_12160	COG4964	Belongs to the GSP D family
BA894_12190	COG2169	Transcriptional regulator
BA894_12195	COG1022	Amp-dependent synthetase and ligase
BA894_12200	COG0583	DNA-binding transcription factor activity
BA894_12205	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
BA894_12210	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
BA894_12220	COG0560	Phosphoserine phosphatase
BA894_12230	COG0813	purine-nucleoside phosphorylase activity
BA894_12235	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
BA894_12240	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
BA894_12245	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
BA894_12250	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BA894_12255	COG0084	hydrolase, TatD family'
BA894_12265	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
BA894_12280	COG3153	acetyltransferase
BA894_12305	COG0534	Mate efflux family protein
BA894_12310	COG4785	May be involved in cell division
BA894_12315	COG1185	polyribonucleotide nucleotidyltransferase activity
BA894_12320	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
BA894_12325	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
BA894_12330	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
BA894_12335	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
BA894_12340	COG0195	Participates in both transcription termination and antitermination
BA894_12345	COG0779	Required for maturation of 30S ribosomal subunits
BA894_12360	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BA894_12370	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
BA894_12375	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
BA894_12380	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
BA894_12385	COG1534	Rna-binding protein
BA894_12390	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BA894_12395	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
BA894_12400	COG2027	D-alanyl-D-alanine carboxypeptidase
BA894_12420	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
BA894_12425	COG0739	heme binding
BA894_12435	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BA894_12440	COG0316	Belongs to the HesB IscA family
BA894_12445	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
BA894_12450	COG0628	permease
BA894_12455	COG2813	Specifically methylates the guanine in position
BA894_12465	COG0747	negative chemotaxis
BA894_12475	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BA894_12480	COG0444	Belongs to the ABC transporter superfamily
BA894_12485	COG4608	Belongs to the ABC transporter superfamily
BA894_12495	COG2971	BadF BadG BcrA BcrD
BA894_12510	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BA894_12525	COG1840	ABC-type Fe3 transport system, periplasmic component
BA894_12530	COG0004	ammonium transporteR
BA894_12545	COG3835	regulator
BA894_12550	COG2610	gluconate transmembrane transporter activity
BA894_12555	COG1929	Belongs to the glycerate kinase type-1 family
BA894_12560	COG1049	propionate catabolic process, 2-methylcitrate cycle
BA894_12565	COG1752	Esterase of the alpha-beta hydrolase superfamily
BA894_12570	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BA894_12575	COG1643	Atp-dependent helicase
BA894_12585	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
BA894_12590	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
BA894_12600	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
BA894_12605	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
BA894_12610	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
BA894_12615	COG0842	Transport permease protein
BA894_12620	COG1131	(ABC) transporter
BA894_12625	COG0659	secondary active sulfate transmembrane transporter activity
BA894_12630	COG0288	reversible hydration of carbon dioxide
BA894_12645	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BA894_12650	COG0508	dehydrogenase complex catalyzes the overall conversion of
BA894_12655	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
BA894_12660	COG2186	Transcriptional regulator
BA894_12670	COG0157	Belongs to the NadC ModD family
BA894_12680	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
BA894_12685	COG1459	type II secretion system
BA894_12695	COG0237	dephospho-CoA kinase activity
BA894_12700	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
BA894_12705	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
BA894_12720	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
BA894_12725	COG0228	four-way junction DNA binding
BA894_12730	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
BA894_12735	COG4137	Cytochrome C assembly protein
BA894_12740	COG4536	flavin adenine dinucleotide binding
BA894_12745	COG1854	S-ribosylhomocysteine lyase activity
BA894_12755	COG2918	glutathione biosynthetic process
BA894_12760	COG0612	Peptidase, M16
BA894_12765	COG1238	metal cluster binding
BA894_12775	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
BA894_12780	COG0511	ligase activity, forming carbon-carbon bonds
BA894_12780	COG5016	pyruvate
BA894_12845	COG0527	aspartate kinase activity
BA894_12850	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
BA894_12865	COG1546	Belongs to the CinA family
BA894_12870	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
BA894_12880	COG4942	peptidase
BA894_12880	COG1388	LysM domain
BA894_12885	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
BA894_12890	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
BA894_12905	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
BA894_12910	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
BA894_12915	COG0148	phosphopyruvate hydratase activity
BA894_12920	COG0504	CTP synthase activity
BA894_12930	COG3956	TIGRFAM MazG family protein
BA894_12935	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BA894_12940	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BA894_12950	COG0736	holo-[acyl-carrier-protein] synthase activity
BA894_12955	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
BA894_12960	COG1381	Involved in DNA repair and RecF pathway recombination
BA894_12965	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
BA894_12975	COG0681	Belongs to the peptidase S26 family
BA894_12980	COG0481	GTPase activity
BA894_12985	COG3086	response to oxidative stress
BA894_13000	COG1595	DNA-templated transcription, initiation
BA894_13005	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
BA894_13015	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
BA894_13020	COG0354	folic acid binding
BA894_13035	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BA894_13040	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BA894_13045	COG3079	Belongs to the UPF0149 family
BA894_13050	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
BA894_13060	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
BA894_13065	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
BA894_13070	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BA894_13080	COG0583	DNA-binding transcription factor activity
BA894_13085	COG1279	arginine transmembrane transporter activity
BA894_13090	COG0668	transmembrane transport
BA894_13095	COG0191	fructose-bisphosphate aldolase activity
BA894_13100	COG0126	phosphoglycerate kinase activity
BA894_13105	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
BA894_13110	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
BA894_13120	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
BA894_13135	COG2356	endonuclease I
BA894_13140	COG1385	rRNA (uridine-N3-)-methyltransferase activity
BA894_13145	COG0189	ligase activity
BA894_13150	COG1678	Uncharacterized ACR, COG1678
BA894_13155	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
BA894_13170	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
BA894_13175	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BA894_13180	COG0762	integral membrane protein
BA894_13195	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
BA894_13200	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BA894_13205	COG2066	Belongs to the glutaminase family
BA894_13225	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
BA894_13230	COG0741	lytic transglycosylase activity
BA894_13340	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
BA894_13345	COG0300	oxidoreductase activity
BA894_13360	COG1028	Short-chain dehydrogenase reductase Sdr
BA894_13365	COG4325	translation initiation factor activity
BA894_13375	COG0795	lipopolysaccharide-transporting ATPase activity
BA894_13380	COG0795	lipopolysaccharide-transporting ATPase activity
BA894_13385	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
BA894_13390	COG2927	DNA polymerase III (CHI subunit)
BA894_13395	COG0525	valine-tRNA ligase activity
BA894_13420	COG2235	arginine
BA894_13430	COG0540	Belongs to the ATCase OTCase family
BA894_13435	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
BA894_13440	COG0251	oxidation-reduction process
BA894_13445	COG0204	Acyl-transferase
BA894_13450	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
BA894_13455	COG5007	Belongs to the BolA IbaG family
BA894_13465	COG2854	intermembrane phospholipid transfer
BA894_13470	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
BA894_13475	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
BA894_13480	COG1127	ABC transporter
BA894_13490	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
BA894_13490	COG0517	IMP dehydrogenase activity
BA894_13500	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
BA894_13505	COG1137	ATPase activity
BA894_13515	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
BA894_13520	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BA894_13525	COG1660	Displays ATPase and GTPase activities
BA894_13530	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BA894_13535	COG2239	Acts as a magnesium transporter
BA894_13540	COG0312	modulator of DNA gyrase
BA894_13545	COG3028	Belongs to the UPF0307 family
BA894_13550	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BA894_13555	COG0564	pseudouridine synthase activity
BA894_13565	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
BA894_13570	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
BA894_13575	COG0312	modulator of DNA gyrase
BA894_13580	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BA894_13585	COG3164	Protein of unknown function
BA894_13590	COG1530	ribonuclease E activity
BA894_13595	COG0424	maF-like protein
BA894_13600	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
BA894_13605	COG1792	Involved in formation and maintenance of cell shape
BA894_13610	COG1077	Cell shape determining protein MreB Mrl
BA894_13660	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
BA894_13670	COG3267	Type II secretory pathway component ExeA
BA894_13670	COG3409	Peptidoglycan-binding domain 1 protein
BA894_13695	COG2199	diguanylate cyclase activity
BA894_13695	COG2200	EAL domain
BA894_13700	COG0629	single-stranded DNA binding
BA894_13715	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
BA894_13725	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
BA894_13730	COG0527	aspartate kinase activity
BA894_13735	COG0646	methionine synthase
BA894_13735	COG1410	methionine synthase
BA894_13795	COG0175	sulfate reduction
BA894_13800	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BA894_13805	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
BA894_13825	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BA894_13830	COG0735	belongs to the Fur family
BA894_13840	COG0166	Belongs to the GPI family
BA894_13845	COG0432	Pfam Uncharacterised protein family UPF0047
BA894_13850	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BA894_13855	COG0305	Participates in initiation and elongation during chromosome replication
BA894_13875	COG2965	DNA replication, synthesis of RNA primer
BA894_13880	COG0360	Binds together with S18 to 16S ribosomal RNA
BA894_13885	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
BA894_13890	COG0338	D12 class N6 adenine-specific DNA methyltransferase
BA894_13900	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
BA894_13905	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
BA894_13935	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
BA894_13945	COG0678	peroxiredoxin activity
BA894_13945	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
BA894_13950	COG0165	Argininosuccinate lyase
BA894_13950	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
BA894_13955	COG0137	argininosuccinate synthase activity
BA894_13960	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
BA894_13965	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
BA894_13975	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
BA894_13985	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
BA894_13990	COG0527	aspartate kinase activity
BA894_13990	COG0460	homoserine dehydrogenase
BA894_13995	COG0626	cystathionine gamma-synthase activity
BA894_14005	COG0281	malic enzyme
BA894_14020	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
BA894_14040	COG2923	Belongs to the DsrF TusC family
BA894_14045	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
BA894_14050	COG2964	Protein conserved in bacteria
BA894_14055	COG0545	Peptidyl-prolyl cis-trans isomerase
BA894_14065	COG2900	Belongs to the SlyX family
BA894_14075	COG1047	Peptidyl-prolyl cis-trans
BA894_14090	COG2249	NAD(P)H dehydrogenase (quinone) activity
BA894_14095	COG0488	(ABC) transporter
BA894_14105	COG0429	hydrolase of the alpha beta-hydrolase fold
BA894_14110	COG3089	Belongs to the UPF0270 family
BA894_14115	COG3954	Phosphoribulokinase
BA894_14120	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BA894_14130	COG1012	belongs to the aldehyde dehydrogenase family
BA894_14140	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
BA894_14145	COG0512	Glutamine amidotransferase of anthranilate synthase
BA894_14150	COG0180	Tryptophanyl-tRNA synthetase
BA894_14155	COG0546	phosphoglycolate phosphatase activity
BA894_14160	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BA894_14165	COG0557	exoribonuclease II activity
BA894_14170	COG1959	2 iron, 2 sulfur cluster binding
BA894_14175	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BA894_14175	COG1017	nitric oxide dioxygenase activity
BA894_14180	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
BA894_14190	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
BA894_14195	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
BA894_14200	COG0330	HflC and HflK could
BA894_14205	COG0330	HflC and HflK could
BA894_14210	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
BA894_14220	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
BA894_14225	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
BA894_14230	COG0860	N-Acetylmuramoyl-L-alanine amidase
BA894_14235	COG0802	atpase or kinase
BA894_14240	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
BA894_14305	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
BA894_14310	COG1162	GTPase activity
BA894_14320	COG0471	metal ion transport
BA894_14330	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
BA894_14335	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BA894_14345	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
BA894_14350	COG1045	serine acetyltransferase
BA894_14355	COG4942	peptidase
BA894_14375	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
BA894_14380	COG1053	succinate dehydrogenase
BA894_14385	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
BA894_14405	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
BA894_14410	COG1509	lysine 2,3-aminomutase activity
BA894_14415	COG1285	pathogenesis
BA894_14445	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
BA894_14450	COG0534	Mate efflux family protein
BA894_14455	COG0205	6-phosphofructokinase activity
BA894_14465	COG3678	ATP-independent chaperone mediated protein folding
BA894_14470	COG0745	RESPONSE REGULATOR receiver
BA894_14475	COG2205	protein histidine kinase activity
BA894_14480	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
BA894_14485	COG3030	protein affecting phage T7 exclusion by the F plasmid
BA894_14490	COG1027	Aspartate ammonia-lyase
BA894_14495	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
BA894_14500	COG4232	protein-disulfide reductase activity
BA894_14510	COG3263	regulation of cellular component size
BA894_14520	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BA894_14535	COG0784	Response regulator, receiver
BA894_14535	COG2198	Histidine kinase
BA894_14535	COG2205	protein histidine kinase activity
BA894_14540	COG2814	Major facilitator Superfamily
BA894_14555	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BA894_14560	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
BA894_14565	COG0511	ligase activity, forming carbon-carbon bonds
BA894_14570	COG0439	Biotin carboxylase
BA894_14575	COG2264	protein methyltransferase activity
BA894_14580	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BA894_14585	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
BA894_14620	COG3335	DDE superfamily endonuclease
BA894_14670	COG3710	Transcriptional regulator
BA894_14685	COG0138	bifunctional purine biosynthesis protein purh
BA894_14690	COG0151	Belongs to the GarS family
BA894_14705	COG1253	flavin adenine dinucleotide binding
BA894_14710	COG3068	Protein conserved in bacteria
BA894_14720	COG1573	uracil-dna glycosylase
BA894_14725	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
BA894_14730	COG2816	NAD+ diphosphatase activity
BA894_14735	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
BA894_14740	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BA894_14745	COG0085	RNA polymerase activity
BA894_14750	COG0222	ribosome binding
BA894_14755	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
BA894_14770	COG0250	Participates in transcription elongation, termination and antitermination
BA894_14775	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BA894_14815	COG0812	UDP-N-acetylmuramate dehydrogenase activity
BA894_14825	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BA894_14835	COG3335	DDE superfamily endonuclease
BA894_14915	COG4206	TonB-dependent receptor
BA894_14935	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BA894_14940	COG0534	Mate efflux family protein
BA894_14945	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
BA894_14950	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
BA894_14955	COG2937	Belongs to the GPAT DAPAT family
BA894_14960	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
BA894_14965	COG3161	chorismate lyase activity
BA894_14970	COG1580	Controls the rotational direction of flagella during chemotaxis
BA894_14975	COG0705	Rhomboid family
BA894_14990	COG2177	Part of the ABC transporter FtsEX involved in
BA894_14995	COG2884	Cell division ATP-binding protein ftsE
BA894_15000	COG0552	protein localization to endoplasmic reticulum
BA894_15005	COG0742	ribosomal rna small subunit methyltransferase
BA894_15050	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
BA894_15055	COG0640	Transcriptional regulator
BA894_15060	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
BA894_15065	COG1280	lysine exporter protein (LysE YggA)
BA894_15070	COG2267	carboxylic ester hydrolase activity
BA894_15075	COG0561	phosphatase activity
BA894_15095	COG1011	Hydrolase
BA894_15100	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
BA894_15110	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
BA894_15115	COG0019	diaminopimelate decarboxylase activity
BA894_15120	COG1965	Belongs to the frataxin family
BA894_15125	COG3072	Adenylate cyclase
BA894_15130	COG0181	hydroxymethylbilane synthase activity
BA894_15135	COG1587	Uroporphyrinogen-III synthase
BA894_15140	COG2959	enzyme of heme biosynthesis
BA894_15145	COG3071	HemY protein
BA894_15190	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
BA894_15200	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
BA894_15205	COG3118	belongs to the thioredoxin family
BA894_15210	COG0513	Belongs to the DEAD box helicase family
BA894_15215	COG0248	Ppx GppA phosphatase
BA894_15230	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
BA894_15240	COG0514	ATP-dependent DNA helicase (RecQ)
BA894_15245	COG2962	Rard protein
BA894_15255	COG1280	lysine exporter protein (LysE YggA)
BA894_15260	COG0405	Gamma-glutamyltransferase
BA894_15265	COG0210	DNA helicase
BA894_15275	COG3220	belongs to the UPF0276 family
BA894_15305	COG0006	proline dipeptidase activity
BA894_15305	COG0006	proline dipeptidase activity
BA894_15315	COG2022	thiamine diphosphate biosynthetic process
BA894_15320	COG2104	thiamine diphosphate biosynthetic process
BA894_15325	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BA894_15335	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
BA894_15340	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BA894_15345	COG2132	Multicopper oxidase
BA894_15395	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
BA894_15405	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
BA894_15410	COG0408	coproporphyrinogen oxidase activity
BA894_15415	COG0009	L-threonylcarbamoyladenylate synthase
BA894_15420	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
BA894_15425	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
BA894_15430	COG0551	DNA topoisomerase type I activity
BA894_15435	COG2922	Belongs to the Smg family
BA894_15440	COG0758	DNA mediated transformation
BA894_15460	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
BA894_15460	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
BA894_15465	COG0569	domain protein
BA894_15470	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
BA894_15480	COG1272	protein, Hemolysin III
BA894_15485	COG4326	sporulation control protein
BA894_15490	COG3084	Protein conserved in bacteria
BA894_15500	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
BA894_15505	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
BA894_15530	COG0697	spore germination
BA894_15540	COG0789	Transcriptional regulator
BA894_15545	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BA894_15550	COG0077	Prephenate dehydratase
BA894_15560	COG1262	PFAM Formylglycine-generating sulfatase enzyme
BA894_15560	COG0515	serine threonine protein kinase
BA894_15580	COG3119	arylsulfatase activity
BA894_15595	COG1522	sequence-specific DNA binding
BA894_15600	COG0583	DNA-binding transcription factor activity
BA894_15620	COG0473	3-isopropylmalate dehydrogenase activity
BA894_15625	COG3181	Tripartite tricarboxylate transporter family receptor
BA894_15640	COG3395	kinase activity
BA894_15645	COG0235	Class ii aldolase
BA894_15685	COG3978	acetolactate synthase activity
BA894_15690	COG0129	dihydroxy-acid dehydratase activity
BA894_15700	COG0583	DNA-binding transcription factor activity
BA894_15705	COG2814	Major facilitator Superfamily
BA894_15710	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BA894_15715	COG0765	amino acid transport
BA894_15725	COG0355	proton-transporting ATP synthase activity, rotational mechanism
BA894_15730	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
BA894_15735	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
BA894_15740	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
BA894_15745	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
BA894_15760	COG0356	it plays a direct role in the translocation of protons across the membrane
BA894_15765	COG3312	ion transport
BA894_15770	COG1475	DNA binding
BA894_15775	COG1192	Involved in chromosome partitioning
BA894_15785	COG0445	tRNA wobble uridine modification
BA894_15795	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
BA894_15805	COG0706	membrane insertase activity
BA894_15810	COG0594	ribonuclease P activity
BA894_15820	COG1126	abc transporter atp-binding protein
BA894_15840	COG1486	melibiose metabolic process
BA894_15845	COG2188	Transcriptional regulator
BA894_15870	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
BA894_15875	COG2159	amidohydrolase
BA894_15880	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
BA894_15885	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
BA894_15910	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BA894_15915	COG0583	DNA-binding transcription factor activity
BA894_15930	COG0667	Aldo Keto reductase
BA894_15935	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BA894_15945	COG0583	DNA-binding transcription factor activity
BA894_15965	COG0579	oxidoreductase
BA894_15990	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
BA894_16005	COG2423	ornithine cyclodeaminase activity
BA894_16015	COG1288	antiporter activity
BA894_16020	COG1473	amidohydrolase
BA894_16025	COG0583	DNA-binding transcription factor activity
BA894_16030	COG2814	Major facilitator Superfamily
BA894_16055	COG3485	protocatechuate 3,4-dioxygenase
BA894_16065	COG4948	Mandelate Racemase Muconate Lactonizing
BA894_16075	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
BA894_16080	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
BA894_16085	COG0183	Belongs to the thiolase family
BA894_16090	COG2267	carboxylic ester hydrolase activity
BA894_16095	COG1414	Transcriptional regulator
BA894_16100	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
BA894_16110	COG0402	S-adenosylhomocysteine deaminase activity
BA894_16120	COG3250	beta-galactosidase activity
BA894_16130	COG2186	Transcriptional regulator
BA894_16140	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
BA894_16150	COG0246	Mannitol dehydrogenase
BA894_16160	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BA894_16165	COG0800	Aldolase
BA894_16180	COG2731	YhcH YjgK YiaL family protein
BA894_16195	COG0516	GMP reductase activity
BA894_16200	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
BA894_16200	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
BA894_16205	COG4989	oxidoreductase activity
BA894_16220	COG0038	chloride channel
BA894_16240	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BA894_16250	COG2897	thiosulfate sulfurtransferase activity
BA894_16270	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
BA894_16275	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
BA894_16280	COG0840	transmembrane signaling receptor activity
BA894_16285	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
BA894_16295	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BA894_16305	COG0840	transmembrane signaling receptor activity
BA894_16325	COG2195	Cleaves the N-terminal amino acid of tripeptides
BA894_16340	COG2197	response regulator
BA894_16345	COG3850	Histidine kinase
BA894_16350	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
BA894_16360	COG0243	molybdopterin cofactor binding
BA894_16390	COG0183	Belongs to the thiolase family
BA894_16400	COG1280	lysine exporter protein (LysE YggA)
BA894_16405	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BA894_16410	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BA894_16430	COG1522	sequence-specific DNA binding
BA894_16460	COG0784	Response regulator, receiver
BA894_16460	COG2205	protein histidine kinase activity
BA894_16465	COG1879	ABC-type sugar transport system periplasmic component
BA894_16495	COG0673	inositol 2-dehydrogenase activity
BA894_16520	COG1522	sequence-specific DNA binding
BA894_16525	COG0531	amino acid
BA894_16540	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
BA894_16545	COG2239	Acts as a magnesium transporter
BA894_16550	COG1418	mRNA catabolic process
BA894_16570	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
BA894_16585	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
BA894_16600	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
BA894_16605	COG2194	sulfuric ester hydrolase activity
BA894_16610	COG0673	inositol 2-dehydrogenase activity
BA894_16615	COG3304	Inner membrane component domain
BA894_16620	COG1846	Transcriptional regulator
BA894_16630	COG4667	esterase of the alpha-beta hydrolase superfamily
BA894_16635	COG1741	Belongs to the pirin family
BA894_16640	COG1278	Cold shock
BA894_16655	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
BA894_16670	COG0625	glutathione transferase activity
BA894_16675	COG1028	Short-chain dehydrogenase reductase Sdr
BA894_16710	COG0513	Belongs to the DEAD box helicase family
BA894_16720	COG0583	DNA-binding transcription factor activity
BA894_16735	COG1028	Short-chain dehydrogenase reductase Sdr
BA894_16745	COG2723	6-phospho-beta-galactosidase activity
BA894_16750	COG2190	(PTS) system
BA894_16750	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BA894_16750	COG1263	PTS System
BA894_16755	COG2723	6-phospho-beta-galactosidase activity
BA894_16760	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BA894_16765	COG1609	Transcriptional regulator
BA894_16770	COG0006	proline dipeptidase activity
BA894_16775	COG3608	succinylglutamate desuccinylase aspartoacylase
BA894_16780	COG1522	sequence-specific DNA binding
BA894_16785	COG1012	belongs to the aldehyde dehydrogenase family
BA894_16790	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BA894_16795	COG3122	Protein conserved in bacteria
BA894_16800	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
BA894_16805	COG2986	histidine ammonia-lyase
BA894_16835	COG0745	RESPONSE REGULATOR receiver
BA894_16840	COG2205	protein histidine kinase activity
BA894_16850	COG1309	transcriptional regulator
BA894_16885	COG2233	PERMEase
BA894_16895	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BA894_16915	COG1278	Cold shock
BA894_16920	COG0557	exoribonuclease II activity
BA894_16935	COG2188	Transcriptional regulator
BA894_16945	COG0697	spore germination
BA894_16955	COG0583	DNA-binding transcription factor activity
BA894_16960	COG2814	Major facilitator Superfamily
BA894_16965	COG4566	intracellular signal transduction
BA894_16970	COG4191	Histidine kinase
BA894_16975	COG0318	PFAM AMP-dependent synthetase and ligase
BA894_16980	COG0659	secondary active sulfate transmembrane transporter activity
BA894_16985	COG0583	DNA-binding transcription factor activity
BA894_16995	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
BA894_17000	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BA894_17000	COG0574	Belongs to the PEP-utilizing enzyme family
BA894_17015	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
BA894_17020	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
BA894_17050	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BA894_17080	COG3842	ATPase activity
BA894_17100	COG1566	PFAM secretion protein HlyD family protein
BA894_17105	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BA894_17140	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
BA894_17160	COG1342	Belongs to the UPF0251 family
BA894_17165	COG3015	lipoprotein NlpE involved in copper resistance
BA894_17170	COG0583	DNA-binding transcription factor activity
BA894_17175	COG0697	spore germination
BA894_17190	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
BA894_17200	COG1335	isochorismatase
BA894_17215	COG0531	amino acid
BA894_17220	COG4302	ethanolamine ammonia-lyase activity
BA894_17225	COG4303	Ethanolamine ammonia lyase large subunit
BA894_17230	COG2207	Transcriptional regulator
BA894_17245	COG1280	lysine exporter protein (LysE YggA)
BA894_17250	COG0459	protein refolding
BA894_17255	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
BA894_17260	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BA894_17285	COG1304	FMN binding
BA894_17305	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
BA894_17325	COG1760	l-serine dehydratase
BA894_17340	COG2866	Carboxypeptidase
BA894_17345	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BA894_17365	COG3842	ATPase activity
BA894_17375	COG1840	ABC-type Fe3 transport system, periplasmic component
BA894_17405	COG3240	lipase activity
BA894_17410	COG1538	Outer membrane efflux protein
BA894_17415	COG1136	(ABC) transporter
BA894_17415	COG0577	efflux transmembrane transporter activity
BA894_17420	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BA894_17435	COG1011	Hydrolase
BA894_17455	COG3152	Membrane
BA894_17465	COG1765	OsmC-like protein
BA894_17470	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BA894_17470	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BA894_17480	COG3046	protein related to deoxyribodipyrimidine photolyase
BA894_17485	COG3706	GGDEF domain
BA894_17515	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BA894_17530	COG0579	oxidoreductase
BA894_17540	COG3706	GGDEF domain
BA894_17560	COG0189	ligase activity
BA894_17565	COG0189	ligase activity
BA894_17565	COG4067	protein conserved in archaea
BA894_17575	COG1166	arginine decarboxylase activity
BA894_17580	COG0010	Belongs to the arginase family
BA894_17585	COG2814	Major facilitator Superfamily
BA894_17590	COG1770	oligopeptidase
BA894_17610	COG0848	biopolymer transport protein
BA894_17615	COG0811	peptide transport
BA894_17620	COG0811	peptide transport
BA894_17640	COG0745	RESPONSE REGULATOR receiver
BA894_17650	COG0584	glycerophosphoryl diester phosphodiesterase
BA894_17660	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BA894_17725	COG1901	pseudouridine methyltransferase
BA894_17730	COG0312	modulator of DNA gyrase
BA894_17735	COG0312	modulator of DNA gyrase
BA894_17740	COG0351	phosphomethylpyrimidine kinase
BA894_17745	COG1116	anion transmembrane transporter activity
BA894_17750	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BA894_17755	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BA894_17760	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
BA894_17780	COG0243	molybdopterin cofactor binding
BA894_17785	COG3005	denitrification pathway
BA894_17800	COG1929	Belongs to the glycerate kinase type-1 family
BA894_17805	COG2610	gluconate transmembrane transporter activity
BA894_17810	COG3835	regulator
BA894_17840	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
BA894_17855	COG3047	cAMP biosynthetic process
BA894_17880	COG2375	cellular response to nickel ion
BA894_17885	COG0800	Aldolase
BA894_17890	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BA894_17905	COG1028	Short-chain dehydrogenase reductase Sdr
BA894_17910	COG1414	Transcriptional regulator
BA894_17915	COG0583	DNA-binding transcription factor activity
BA894_17930	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
BA894_17945	COG2199	diguanylate cyclase activity
BA894_17950	COG0561	phosphatase activity
BA894_17955	COG0564	pseudouridine synthase activity
BA894_17960	COG0534	Mate efflux family protein
BA894_17965	COG5001	Diguanylate cyclase
BA894_17975	COG3123	guanosine phosphorylase activity
BA894_18015	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BA894_18020	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BA894_18025	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
BA894_18035	COG2259	Doxx family
BA894_18040	COG1741	Belongs to the pirin family
BA894_18060	COG0363	glucosamine-6-phosphate deaminase activity
BA894_18075	COG1131	(ABC) transporter
BA894_18085	COG0786	glutamate:sodium symporter activity
BA894_18095	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
BA894_18100	COG3279	Response regulator of the LytR AlgR family
BA894_18105	COG3275	phosphorelay sensor kinase activity
BA894_18120	COG4591	ABC-type transport system involved in lipoprotein release permease component
BA894_18125	COG1136	(ABC) transporter
BA894_18150	COG0444	Belongs to the ABC transporter superfamily
BA894_18155	COG4608	Belongs to the ABC transporter superfamily
BA894_18180	COG1444	tRNA N-acetyltransferase activity
BA894_18235	COG0259	pyridoxamine-phosphate oxidase activity
BA894_18265	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BA894_18295	COG3119	arylsulfatase activity
BA894_18300	COG3634	alkyl hydroperoxide reductase activity
BA894_18305	COG0450	alkyl hydroperoxide reductase
BA894_18310	COG1846	Transcriptional regulator
BA894_18315	COG1764	response to oxidative stress
BA894_18335	COG1136	(ABC) transporter
BA894_18340	COG4221	oxidoreductase activity
BA894_18350	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BA894_18355	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BA894_18360	COG4521	taurine ABC transporter
BA894_18365	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
BA894_18370	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BA894_18380	COG2211	Major facilitator Superfamily
BA894_18385	COG3940	Belongs to the glycosyl hydrolase 43 family
BA894_18390	COG2017	converts alpha-aldose to the beta-anomer
BA894_18400	COG2160	L-arabinose isomerase activity
BA894_18410	COG1069	ribulokinase activity
BA894_18415	COG1879	ABC-type sugar transport system periplasmic component
BA894_18420	COG1129	ABC transporter
BA894_18425	COG1172	Belongs to the binding-protein-dependent transport system permease family
BA894_18435	COG4772	TonB-dependent receptor
BA894_18440	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
BA894_18445	COG3119	arylsulfatase activity
BA894_18450	COG3119	arylsulfatase activity
BA894_18455	COG0641	radical SAM
BA894_18465	COG0747	negative chemotaxis
BA894_18475	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BA894_18490	COG1940	carbohydrate kinase activity
BA894_18500	COG0659	secondary active sulfate transmembrane transporter activity
BA894_18505	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
BA894_18510	COG1085	galactose-1-phosphate uridylyltransferase
BA894_18520	COG5426	von Willebrand factor, type A
BA894_18525	COG5492	domain, Protein
BA894_18530	COG0612	Peptidase, M16
BA894_18540	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
BA894_18550	COG1621	beta-fructofuranosidase activity
BA894_18580	COG2207	Transcriptional regulator
BA894_18585	COG2423	ornithine cyclodeaminase activity
BA894_18590	COG0251	oxidation-reduction process
BA894_18595	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BA894_18615	COG0662	Cupin 2, conserved barrel domain protein
BA894_18620	COG0583	DNA-binding transcription factor activity
BA894_18650	COG0583	DNA-binding transcription factor activity
BA894_18655	COG2076	Multidrug Resistance protein
BA894_18670	COG3171	Protein conserved in bacteria
BA894_18685	COG0814	amino acid
BA894_18690	COG3033	Beta-eliminating lyase
BA894_18710	COG4604	ABC transporter, ATP-binding protein
BA894_18715	COG4605	iron ion homeostasis
BA894_18720	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BA894_18725	COG4607	ABC-type enterochelin transport system periplasmic component
BA894_18730	COG0583	DNA-binding transcription factor activity
BA894_18735	COG4771	TonB-dependent receptor
BA894_18740	COG2814	Major facilitator Superfamily
BA894_18750	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BA894_18750	COG1263	PTS System
BA894_18780	COG0366	Alpha amylase catalytic
BA894_18795	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
BA894_18800	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
BA894_18805	COG1162	GTPase activity
BA894_18810	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BA894_18810	COG1263	PTS System
BA894_18815	COG1999	signal sequence binding
BA894_18830	COG2909	trisaccharide binding
BA894_18835	COG0058	SHG alpha-glucan phosphorylase activity
BA894_18840	COG1640	4-alpha-glucanotransferase
BA894_18845	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
BA894_18850	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BA894_18855	COG0366	Alpha amylase catalytic
BA894_18860	COG3366	ferrous iron transmembrane transporter activity
BA894_18865	COG0700	Nucleoside recognition
BA894_18870	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BA894_18875	COG3339	Conserved Protein
BA894_18880	COG1301	dicarboxylic acid transport
BA894_18895	COG2095	MarC family integral membrane protein
BA894_18900	COG4667	esterase of the alpha-beta hydrolase superfamily
BA894_18920	COG1686	Belongs to the peptidase S11 family
BA894_18925	COG4628	conserved protein (DUF2132)
BA894_18935	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BA894_18940	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
BA894_18945	COG0628	permease
BA894_18955	COG1566	PFAM secretion protein HlyD family protein
BA894_18990	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
BA894_19000	COG0346	lactoylglutathione lyase activity
BA894_19020	COG0745	RESPONSE REGULATOR receiver
BA894_19045	COG3300	MHYT domain
BA894_19045	COG5001	Diguanylate cyclase
BA894_19050	COG0156	8-amino-7-oxononanoate synthase activity
BA894_19055	COG1063	alcohol dehydrogenase
BA894_19065	COG1278	Cold shock
BA894_19080	COG0668	transmembrane transport
BA894_19090	COG1304	FMN binding
BA894_19095	COG1620	l-lactate permease
BA894_19100	COG0583	DNA-binding transcription factor activity
BA894_19105	COG1505	serine-type exopeptidase activity
BA894_19115	COG1067	ATP-dependent peptidase activity
BA894_19135	COG1247	-acetyltransferase
BA894_19140	COG0437	4 iron, 4 sulfur cluster binding
BA894_19145	COG0348	domain, Protein
BA894_19155	COG4720	Psort location CytoplasmicMembrane, score
BA894_19160	COG1566	PFAM secretion protein HlyD family protein
BA894_19170	COG3706	GGDEF domain
BA894_19185	COG0813	purine-nucleoside phosphorylase activity
BA894_19190	COG3272	Protein of unknown function (DUF1722)
BA894_19195	COG0789	Transcriptional regulator
BA894_19200	COG0415	Belongs to the DNA photolyase family
BA894_19205	COG1388	LysM domain
BA894_19205	COG1376	ErfK ybiS ycfS ynhG family protein
BA894_19215	COG0513	Belongs to the DEAD box helicase family
BA894_19220	COG0840	transmembrane signaling receptor activity
BA894_19225	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
BA894_19230	COG0573	inorganic phosphate transmembrane transporter activity
BA894_19235	COG0581	inorganic phosphate transmembrane transporter activity
BA894_19240	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
BA894_19250	COG2304	oxidoreductase activity
BA894_19270	COG0714	Associated with various cellular activities
BA894_19280	COG2197	response regulator
BA894_19300	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BA894_19315	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
BA894_19320	COG1120	ATPase activity
BA894_19325	COG4774	siderophore transport
BA894_19330	COG1132	(ABC) transporter
BA894_19335	COG0583	DNA-binding transcription factor activity
BA894_19360	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BA894_19370	COG3241	Transfers electrons from cytochrome c551 to cytochrome oxidase
BA894_19375	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BA894_19380	COG2084	Dehydrogenase
BA894_19390	COG2130	NADP-dependent
BA894_19395	COG1309	transcriptional regulator
BA894_19430	COG0438	transferase activity, transferring glycosyl groups
BA894_19440	COG3206	protein involved in exopolysaccharide biosynthesis
BA894_19440	COG0489	protein tyrosine kinase activity
BA894_19455	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
BA894_19460	COG3842	ATPase activity
BA894_19470	COG1175	transmembrane transport
BA894_19475	COG3833	ABC-type maltose transport systems, permease component
BA894_19545	COG3706	GGDEF domain
BA894_19570	COG2885	chlorophyll binding
BA894_19570	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
BA894_19590	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BA894_19610	COG1619	proteins homologs of microcin C7 resistance protein MccF
BA894_19620	COG3547	Transposase (IS116 IS110 IS902 family)
BA894_19625	COG2226	methyltransferase
BA894_19645	COG0805	protein transport
BA894_19655	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
BA894_19705	COG4964	Belongs to the GSP D family
BA894_19730	COG0840	transmembrane signaling receptor activity
BA894_19745	COG4999	Histidine kinase
BA894_19745	COG3850	Histidine kinase
BA894_19745	COG3437	response regulator, receiver
BA894_19745	COG2205	protein histidine kinase activity
BA894_19755	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BA894_19790	COG0741	lytic transglycosylase activity
BA894_19800	COG1522	sequence-specific DNA binding
BA894_19810	COG1448	Aminotransferase
BA894_19835	COG0071	Belongs to the small heat shock protein (HSP20) family
BA894_19855	COG1073	alpha beta
BA894_19860	COG1073	alpha beta
BA894_19870	COG1132	(ABC) transporter
BA894_19885	COG2176	DNA-directed DNA polymerase activity
BA894_19895	COG2354	Protein conserved in bacteria
BA894_19900	COG0418	dihydroorotase activity
BA894_19910	COG0633	Ferredoxin
BA894_19910	COG3217	Mosc domain protein beta barrel domain protein
BA894_19910	COG3217	Mosc domain protein beta barrel domain protein
BA894_19910	COG0633	Ferredoxin
BA894_19915	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
BA894_19920	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
BA894_19955	COG0748	coenzyme F420 binding
BA894_19960	COG0835	chemotaxis
BA894_19960	COG0784	Response regulator, receiver
BA894_19965	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BA894_19970	COG1403	HNH endonuclease
BA894_19985	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
BA894_20000	COG1063	alcohol dehydrogenase
BA894_20005	COG0583	DNA-binding transcription factor activity
BA894_20010	COG1902	pentaerythritol trinitrate reductase activity
BA894_20025	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BA894_20030	COG4948	Mandelate Racemase Muconate Lactonizing
BA894_20040	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BA894_20065	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
BA894_20075	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BA894_20085	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
BA894_20095	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
BA894_20105	COG1979	alcohol dehydrogenase
BA894_20110	COG0366	Alpha amylase catalytic
BA894_20135	COG2249	NAD(P)H dehydrogenase (quinone) activity
BA894_20140	COG1349	DNA-binding transcription factor activity
BA894_20145	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
BA894_20150	COG3395	kinase activity
BA894_20155	COG1454	alcohol dehydrogenase
BA894_20160	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BA894_20180	COG2731	YhcH YjgK YiaL family protein
BA894_20185	COG1028	Short-chain dehydrogenase reductase Sdr
BA894_20190	COG0589	response to stress
BA894_20195	COG2067	long-chain fatty acid transport protein
BA894_20200	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BA894_20205	COG3706	GGDEF domain
BA894_20215	COG2871	sodium ion transport
BA894_20225	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BA894_20240	COG3383	formate dehydrogenase (NAD+) activity
BA894_20260	COG0842	Transport permease protein
BA894_20265	COG1131	(ABC) transporter
BA894_20280	COG0798	PFAM Bile acid sodium symporter
BA894_20290	COG0747	negative chemotaxis
BA894_20310	COG0814	amino acid
BA894_20345	COG0739	heme binding
BA894_20350	COG5001	Diguanylate cyclase
BA894_20355	COG0583	DNA-binding transcription factor activity
BA894_20375	COG0179	Fumarylacetoacetate (FAA) hydrolase
BA894_20395	COG1280	lysine exporter protein (LysE YggA)
BA894_20400	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BA894_20415	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
BA894_20440	COG1612	heme a metabolic process
BA894_20445	COG0109	protoheme IX farnesyltransferase activity
BA894_20450	COG0545	Peptidyl-prolyl cis-trans isomerase
BA894_20480	COG1278	Cold shock
BA894_20505	COG0577	efflux transmembrane transporter activity
BA894_20505	COG1136	(ABC) transporter
BA894_20515	COG0840	transmembrane signaling receptor activity
BA894_20520	COG0783	Belongs to the Dps family
BA894_20530	COG2133	pyrroloquinoline quinone binding
BA894_20535	COG1454	alcohol dehydrogenase
BA894_20540	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
BA894_20560	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
BA894_20565	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BA894_20570	COG3186	Phenylalanine-4-hydroxylase
BA894_20595	COG3530	Putative quorum-sensing-regulated virulence factor
BA894_20600	COG0133	tryptophan synthase activity
BA894_20610	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
BA894_20615	COG0523	cobalamin synthesis protein
BA894_20620	COG0513	Belongs to the DEAD box helicase family
BA894_20635	COG2200	EAL domain
BA894_20640	COG1119	ATPase activity
BA894_20660	COG0583	DNA-binding transcription factor activity
BA894_20665	COG2190	(PTS) system
BA894_20665	COG1263	PTS System
BA894_20665	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BA894_20680	COG1609	Transcriptional regulator
BA894_20710	COG2211	Major facilitator Superfamily
BA894_20715	COG0673	inositol 2-dehydrogenase activity
BA894_20720	COG1609	Transcriptional regulator
BA894_20730	COG1846	Transcriptional regulator
BA894_20735	COG1028	Short-chain dehydrogenase reductase Sdr
BA894_20740	COG2814	Major facilitator Superfamily
BA894_20745	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BA894_20780	COG1447	Phosphotransferase system cellobiose-specific component IIA
BA894_20785	COG2723	6-phospho-beta-galactosidase activity
BA894_20800	COG1454	alcohol dehydrogenase
BA894_20825	COG1902	pentaerythritol trinitrate reductase activity
BA894_20825	COG0446	pyridine nucleotide-disulphide oxidoreductase
BA894_20830	COG0247	lactate metabolic process
BA894_20830	COG2181	nitrate reductase activity
BA894_20835	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
BA894_20845	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BA894_20855	COG0656	L-ascorbic acid biosynthetic process
BA894_20860	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
BA894_20875	COG0356	it plays a direct role in the translocation of protons across the membrane
BA894_20885	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
BA894_20885	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
BA894_20890	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
BA894_20915	COG0789	Transcriptional regulator
BA894_20920	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BA894_20940	COG1012	belongs to the aldehyde dehydrogenase family
BA894_20945	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BA894_20965	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
BA894_20975	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BA894_20980	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
BA894_20995	COG0404	The glycine cleavage system catalyzes the degradation of glycine
BA894_20995	COG0446	pyridine nucleotide-disulphide oxidoreductase
BA894_21010	COG1760	l-serine dehydratase
BA894_21020	COG1064	alcohol dehydrogenase
BA894_21025	COG1979	alcohol dehydrogenase
BA894_21030	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
BA894_21045	COG2207	Transcriptional regulator
BA894_21055	COG2211	Major facilitator Superfamily
BA894_21065	COG0747	negative chemotaxis
BA894_21070	COG0601	transmembrane transport
BA894_21080	COG4172	Belongs to the ABC transporter superfamily
BA894_21085	COG1621	beta-fructofuranosidase activity
BA894_21090	COG2207	Transcriptional regulator
BA894_21105	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
BA894_21140	COG1070	Carbohydrate kinase
BA894_21150	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BA894_21170	COG2855	membrane
BA894_21185	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BA894_21190	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BA894_21195	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
BA894_21210	COG1414	Transcriptional regulator
BA894_21215	COG0280	phosphate acetyltransferase
BA894_21220	COG0730	response to heat
BA894_21225	COG0745	RESPONSE REGULATOR receiver
BA894_21225	COG3706	GGDEF domain
BA894_21240	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
BA894_21260	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
BA894_21265	COG0589	response to stress
BA894_21275	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
BA894_21275	COG2111	Na H antiporter
BA894_21295	COG2212	antiporter activity
BA894_21300	COG1320	monovalent cation:proton antiporter activity
BA894_21305	COG1349	DNA-binding transcription factor activity
BA894_21310	COG2407	Converts the aldose L-fucose into the corresponding ketose L-fuculose
BA894_21315	COG1070	Carbohydrate kinase
BA894_21320	COG0235	Class ii aldolase
BA894_21325	COG1454	alcohol dehydrogenase
BA894_21330	COG0513	Belongs to the DEAD box helicase family
BA894_21340	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BA894_21380	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
BA894_21390	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BA894_21400	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BA894_21435	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
BA894_21440	COG2197	response regulator
BA894_21445	COG3850	Histidine kinase
BA894_21450	COG2223	nitrite transmembrane transporter activity
BA894_21455	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
BA894_21460	COG1140	nitrate reductase beta subunit
BA894_21465	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
BA894_21470	COG2181	nitrate reductase activity
BA894_21510	COG3706	GGDEF domain
BA894_21535	COG2815	serine threonine protein kinase
BA894_21535	COG0515	serine threonine protein kinase
BA894_21645	COG0840	transmembrane signaling receptor activity
BA894_21660	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
BA894_21675	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BA894_21685	COG1247	-acetyltransferase
BA894_21705	COG3550	peptidyl-serine autophosphorylation
BA894_21730	COG5413	integral membrane protein
BA894_21745	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
BA894_21750	COG1960	acyl-CoA dehydrogenase activity
BA894_21760	COG0183	Belongs to the thiolase family
BA894_21770	COG1960	acyl-CoA dehydrogenase activity
BA894_21775	COG1024	Enoyl-CoA hydratase
BA894_21780	COG1024	Enoyl-CoA hydratase
BA894_21790	COG1028	Short-chain dehydrogenase reductase Sdr
BA894_21795	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
BA894_21800	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
BA894_21805	COG1845	cytochrome c oxidase, subunit III
BA894_21810	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
BA894_21815	COG0109	protoheme IX farnesyltransferase activity
BA894_21820	COG1902	pentaerythritol trinitrate reductase activity
BA894_21830	COG0531	amino acid
BA894_21835	COG2040	homocysteine
BA894_21860	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
BA894_21875	COG1126	abc transporter atp-binding protein
BA894_21880	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BA894_21885	COG4215	(ABC) transporter
BA894_21890	COG4160	amino acid transport
BA894_21895	COG1115	amino acid carrier protein
BA894_21905	COG0583	DNA-binding transcription factor activity
BA894_21920	COG1404	Belongs to the peptidase S8 family
BA894_21925	COG3949	Membrane
BA894_21935	COG3604	Transcriptional regulator
BA894_21960	COG3383	formate dehydrogenase (NAD+) activity
BA894_21970	COG0543	2 iron, 2 sulfur cluster binding
BA894_21975	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BA894_21975	COG0574	Belongs to the PEP-utilizing enzyme family
BA894_21985	COG0508	dehydrogenase complex catalyzes the overall conversion of
BA894_21990	COG0022	dehydrogenase e1 component
BA894_21990	COG0508	dehydrogenase complex catalyzes the overall conversion of
BA894_21995	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BA894_22010	COG4702	Belongs to the UPF0303 family
BA894_22015	COG0673	inositol 2-dehydrogenase activity
BA894_22020	COG1349	DNA-binding transcription factor activity
BA894_22060	COG0443	Heat shock 70 kDa protein
BA894_22090	COG0814	amino acid
BA894_22100	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BA894_22155	COG0509	glycine decarboxylation via glycine cleavage system
BA894_22160	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
BA894_22170	COG0404	The glycine cleavage system catalyzes the degradation of glycine
BA894_22180	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BA894_22195	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
BA894_22195	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BA894_22195	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BA894_22200	COG1105	Belongs to the carbohydrate kinase PfkB family
BA894_22205	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BA894_22205	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
BA894_22210	COG1609	Transcriptional regulator
BA894_22225	COG0765	amino acid transport
BA894_22230	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BA894_22235	COG0765	amino acid transport
BA894_22240	COG1126	abc transporter atp-binding protein
BA894_22250	COG1979	alcohol dehydrogenase
BA894_22255	COG2207	Transcriptional regulator
BA894_22265	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
BA894_22270	COG2759	Belongs to the formate--tetrahydrofolate ligase family
BA894_22275	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BA894_22290	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BA894_22295	COG0840	transmembrane signaling receptor activity
BA894_22300	COG3124	Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP
BA894_22305	COG0513	Belongs to the DEAD box helicase family
BA894_22310	COG4943	cyclic-guanylate-specific phosphodiesterase activity
BA894_22325	COG3038	cytochrome b561
BA894_22330	COG2353	YceI-like domain
BA894_22335	COG2116	formate transmembrane transporter activity
BA894_22340	COG0583	DNA-binding transcription factor activity
BA894_22350	COG3593	DNA synthesis involved in DNA repair
BA894_22355	COG0737	Belongs to the 5'-nucleotidase family
BA894_22375	COG2267	carboxylic ester hydrolase activity
BA894_22380	COG2067	long-chain fatty acid transport protein
BA894_22390	COG0501	Belongs to the peptidase M48B family
BA894_22395	COG2050	protein possibly involved in aromatic compounds catabolism
BA894_22415	COG1324	tolerance protein
BA894_22440	COG3300	MHYT domain
BA894_22440	COG5001	Diguanylate cyclase
BA894_22445	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
BA894_22455	COG4181	ATPase activity
BA894_22460	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
BA894_22470	COG1984	allophanate hydrolase subunit 2
BA894_22475	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
BA894_22480	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
BA894_22485	COG5001	Diguanylate cyclase
BA894_22485	COG3447	MASE1 domain protein
BA894_22485	COG5002	protein histidine kinase activity
BA894_22495	COG0583	DNA-binding transcription factor activity
BA894_22500	COG0045	succinate-CoA ligase (ADP-forming) activity
BA894_22500	COG1042	CoA-binding domain protein
BA894_22500	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BA894_22510	COG1181	Belongs to the D-alanine--D-alanine ligase family
BA894_22520	COG0023	Translation Initiation Factor
BA894_22525	COG2801	Transposase and inactivated derivatives
BA894_22530	COG2801	Transposase and inactivated derivatives
BA894_22560	COG0745	RESPONSE REGULATOR receiver
BA894_22570	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
BA894_22575	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
BA894_22590	COG3706	GGDEF domain
BA894_22595	COG4251	negative regulation of phosphorylation
BA894_22595	COG3706	GGDEF domain
BA894_22595	COG2203	Gaf domain
BA894_22595	COG5001	Diguanylate cyclase
BA894_22605	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
BA894_22610	COG4149	molybdate abc transporter
BA894_22615	COG0725	ABC transporter, periplasmic molybdate-binding protein
BA894_22620	COG1492	cobalamin metabolic process
BA894_22630	COG4067	protein conserved in archaea
BA894_22630	COG0189	ligase activity
BA894_22640	COG2207	Transcriptional regulator
BA894_22645	COG0534	Mate efflux family protein
BA894_22650	COG0602	queuosine metabolic process
BA894_22655	COG1328	CTP reductase activity
BA894_22705	COG3550	peptidyl-serine autophosphorylation
BA894_22735	COG0840	transmembrane signaling receptor activity
BA894_22860	COG0840	transmembrane signaling receptor activity
BA894_22905	COG3706	GGDEF domain
BA894_22910	COG2197	response regulator
BA894_22915	COG3300	MHYT domain
BA894_22915	COG5001	Diguanylate cyclase
BA894_22930	COG1279	arginine transmembrane transporter activity
BA894_22945	COG1473	amidohydrolase
BA894_22960	COG1522	sequence-specific DNA binding
BA894_23010	COG0583	DNA-binding transcription factor activity
BA894_23015	COG1063	alcohol dehydrogenase
BA894_23045	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
BA894_23050	COG0446	pyridine nucleotide-disulphide oxidoreductase
BA894_23060	COG0583	DNA-binding transcription factor activity
BA894_23065	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
BA894_23085	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BA894_23090	COG3118	belongs to the thioredoxin family
BA894_23095	COG2814	Major facilitator Superfamily
BA894_23115	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
BA894_23135	COG2116	formate transmembrane transporter activity
BA894_23140	COG2146	nitrite reductase [NAD(P)H] activity
BA894_23145	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BA894_23150	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BA894_23155	COG5001	Diguanylate cyclase
BA894_23180	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
BA894_23180	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
BA894_23190	COG3706	GGDEF domain
BA894_23190	COG0745	RESPONSE REGULATOR receiver
BA894_23235	COG0277	FAD linked oxidase domain protein
BA894_23240	COG0583	DNA-binding transcription factor activity
BA894_23250	COG2425	protein containing a von Willebrand factor type A (vWA) domain
BA894_23265	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
BA894_23280	COG3040	lipid binding
BA894_23290	COG0702	epimerase
BA894_23295	COG1733	regulation of RNA biosynthetic process
BA894_23315	COG0419	ATPase involved in DNA repair
BA894_23320	COG0420	3'-5' exonuclease activity
BA894_23325	COG2130	NADP-dependent
BA894_23330	COG1846	Transcriptional regulator
BA894_23340	COG0745	RESPONSE REGULATOR receiver
BA894_23345	COG2205	protein histidine kinase activity
BA894_23360	COG2366	antibiotic biosynthetic process
BA894_23365	COG4172	Belongs to the ABC transporter superfamily
BA894_23370	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BA894_23375	COG0601	transmembrane transport
BA894_23380	COG4166	transmembrane transport
BA894_23385	COG0534	Mate efflux family protein
BA894_23395	COG0765	amino acid transport
BA894_23400	COG0765	amino acid transport
BA894_23410	COG1737	Transcriptional regulator
BA894_23415	COG1028	Short-chain dehydrogenase reductase Sdr
BA894_23420	COG4670	ketone body catabolic process
BA894_23440	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
BA894_23470	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
BA894_23520	COG0583	DNA-binding transcription factor activity
BA894_23540	COG0583	DNA-binding transcription factor activity
BA894_23545	COG2259	Doxx family
BA894_23550	COG1335	isochorismatase
BA894_23570	COG1741	Belongs to the pirin family
BA894_23580	COG0655	NAD(P)H dehydrogenase (quinone) activity
BA894_23605	COG2801	Transposase and inactivated derivatives
BA894_23610	COG2963	transposase activity
BA894_23630	COG3290	protein histidine kinase activity
BA894_23640	COG0471	metal ion transport
BA894_23685	COG2197	response regulator
BA894_23695	COG3706	GGDEF domain
BA894_23705	COG3300	MHYT domain
BA894_23705	COG5001	Diguanylate cyclase
BA894_23710	COG2205	protein histidine kinase activity
BA894_23710	COG0784	Response regulator, receiver
BA894_23715	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
BA894_23725	COG1214	PFAM Peptidase M22, glycoprotease
BA894_23725	COG0456	acetyltransferase
BA894_23735	COG3069	C4-dicarboxylate transmembrane transporter activity
BA894_23740	COG1704	LemA family
BA894_23745	COG0501	Belongs to the peptidase M48B family
BA894_23755	COG2223	nitrite transmembrane transporter activity
BA894_23765	COG1597	lipid kinase activity
BA894_23800	COG0714	Associated with various cellular activities
BA894_23805	COG0641	radical SAM
BA894_23810	COG3119	arylsulfatase activity
BA894_23830	COG0784	Response regulator, receiver
BA894_23830	COG2198	Histidine kinase
BA894_23830	COG2205	protein histidine kinase activity
BA894_23835	COG1879	ABC-type sugar transport system periplasmic component
BA894_23840	COG1803	Methylglyoxal synthase
BA894_23845	COG0210	DNA helicase
BA894_23850	COG1289	transmembrane transporter activity
BA894_23860	COG0789	Transcriptional regulator
BA894_23865	COG1609	Transcriptional regulator
BA894_23870	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BA894_23875	COG1879	ABC-type sugar transport system periplasmic component
BA894_23880	COG1172	Belongs to the binding-protein-dependent transport system permease family
BA894_23885	COG1129	ABC transporter
BA894_23890	COG1869	D-ribose catabolic process
BA894_23895	COG5001	Diguanylate cyclase
BA894_23950	COG4658	electron transport chain
BA894_23960	COG2878	Part of a membrane complex involved in electron transport
BA894_23965	COG4657	Part of a membrane complex involved in electron transport
BA894_23970	COG0784	Response regulator, receiver
BA894_23970	COG4191	Histidine kinase
BA894_23990	COG1278	Cold shock
BA894_23995	COG4628	conserved protein (DUF2132)
BA894_24005	COG1280	lysine exporter protein (LysE YggA)
BA894_24010	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
BA894_24025	COG3265	gluconokinase activity
BA894_24145	COG0243	molybdopterin cofactor binding
BA894_24155	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BA894_24165	COG2223	nitrite transmembrane transporter activity
BA894_24170	COG0515	serine threonine protein kinase
BA894_24170	COG2815	serine threonine protein kinase
BA894_24175	COG2197	response regulator
BA894_24180	COG2207	Transcriptional regulator
BA894_24205	COG3300	MHYT domain
BA894_24205	COG5001	Diguanylate cyclase
BA894_24215	COG0330	HflC and HflK could
BA894_24220	COG0517	IMP dehydrogenase activity
BA894_24220	COG4175	Glycine betaine
BA894_24225	COG4176	ABC-type proline glycine betaine transport system permease component
BA894_24240	COG1012	belongs to the aldehyde dehydrogenase family
BA894_24245	COG1309	transcriptional regulator
BA894_24250	COG1028	Short-chain dehydrogenase reductase Sdr
BA894_24265	COG1024	Enoyl-CoA hydratase
BA894_24270	COG1960	acyl-CoA dehydrogenase activity
BA894_24280	COG0183	Belongs to the thiolase family
BA894_24290	COG1960	acyl-CoA dehydrogenase activity
BA894_24295	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
BA894_24330	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
BA894_24340	COG4948	Mandelate Racemase Muconate Lactonizing
BA894_24365	COG0583	DNA-binding transcription factor activity
BA894_24375	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
BA894_24375	COG3264	Mechanosensitive ion channel
BA894_24385	COG3474	cytochrome
BA894_24450	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BA894_24450	COG2205	protein histidine kinase activity
BA894_24460	COG0583	DNA-binding transcription factor activity
BA894_24470	COG0110	maltose O-acetyltransferase activity
BA894_24475	COG0840	transmembrane signaling receptor activity
BA894_24485	COG2814	Major facilitator Superfamily
BA894_24495	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
BA894_24510	COG1355	regulation of microtubule-based process
BA894_24535	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BA894_24535	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
BA894_24540	COG2610	gluconate transmembrane transporter activity
BA894_24545	COG3622	Belongs to the hyi family
BA894_24550	COG0235	Class ii aldolase
BA894_24555	COG3395	kinase activity
BA894_24560	COG2084	Dehydrogenase
BA894_24565	COG1349	DNA-binding transcription factor activity
BA894_24570	COG0656	L-ascorbic acid biosynthetic process
BA894_24575	COG0402	S-adenosylhomocysteine deaminase activity
BA894_24580	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BA894_24600	COG1028	Short-chain dehydrogenase reductase Sdr
BA894_24640	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BA894_24645	COG1132	(ABC) transporter
BA894_24650	COG1132	(ABC) transporter