locus-tag class description PN96_00040 PF13091 PLD-like domain PN96_00050 PF01565 FAD binding domain PN96_00050 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain PN96_00055 PF03099 Biotin/lipoate A/B protein ligase family PN96_00055 PF02237 Biotin protein ligase C terminal domain PN96_00055 PF08279 HTH domain PN96_00060 PF00485 Phosphoribulokinase / Uridine kinase family PN96_00085 PF00009 Elongation factor Tu GTP binding domain PN96_00085 PF03144 Elongation factor Tu domain 2 PN96_00085 PF03143 Elongation factor Tu C-terminal domain PN96_00090 PF00584 SecE/Sec61-gamma subunits of protein translocation complex PN96_00095 PF00467 KOW motif PN96_00095 PF02357 Transcription termination factor nusG PN96_00100 PF03946 Ribosomal protein L11, N-terminal domain PN96_00100 PF00298 Ribosomal protein L11, RNA binding domain PN96_00105 PF00687 Ribosomal protein L1p/L10e family PN96_00110 PF00466 Ribosomal protein L10 PN96_00115 PF00542 Ribosomal protein L7/L12 C-terminal domain PN96_00115 PF16320 Ribosomal protein L7/L12 dimerisation domain PN96_00120 PF04560 RNA polymerase Rpb2, domain 7 PN96_00120 PF00562 RNA polymerase Rpb2, domain 6 PN96_00120 PF10385 RNA polymerase beta subunit external 1 domain PN96_00120 PF04565 RNA polymerase Rpb2, domain 3 PN96_00120 PF04561 RNA polymerase Rpb2, domain 2 PN96_00120 PF04563 RNA polymerase beta subunit PN96_00125 PF05000 RNA polymerase Rpb1, domain 4 PN96_00125 PF04998 RNA polymerase Rpb1, domain 5 PN96_00125 PF00623 RNA polymerase Rpb1, domain 2 PN96_00125 PF04997 RNA polymerase Rpb1, domain 1 PN96_00125 PF04983 RNA polymerase Rpb1, domain 3 PN96_00130 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ PN96_00135 PF09297 NADH pyrophosphatase zinc ribbon domain PN96_00135 PF00293 NUDIX domain PN96_00140 PF01208 Uroporphyrinogen decarboxylase (URO-D) PN96_00145 PF03167 Uracil DNA glycosylase superfamily PN96_00150 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PN96_00155 PF04222 Protein of unknown function (DUF416) PN96_00160 PF01595 Cyclin M transmembrane N-terminal domain PN96_00160 PF00571 CBS domain PN96_00165 PF00216 Bacterial DNA-binding protein PN96_00175 PF02843 Phosphoribosylglycinamide synthetase, C domain PN96_00175 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain PN96_00175 PF02844 Phosphoribosylglycinamide synthetase, N domain PN96_00180 PF01808 AICARFT/IMPCHase bienzyme PN96_00180 PF02142 MGS-like domain PN96_00190 PF13411 MerR HTH family regulatory protein PN96_00195 PF00486 Transcriptional regulatory protein, C terminal PN96_00195 PF18500 CadC C-terminal domain 1 PN96_00260 PF00999 Sodium/hydrogen exchanger family PN96_00265 PF02965 Vitamin B12 dependent methionine synthase, activation domain PN96_00265 PF02574 Homocysteine S-methyltransferase PN96_00265 PF00809 Pterin binding enzyme PN96_00265 PF02310 B12 binding domain PN96_00265 PF02607 B12 binding domain PN96_00270 PF00696 Amino acid kinase family PN96_00270 PF01842 ACT domain PN96_00275 PF00266 Aminotransferase class-V PN96_00285 PF17760 UvrA interaction domain PN96_00285 PF00005 ABC transporter PN96_00285 PF17755 UvrA DNA-binding domain PN96_00290 PF00483 Nucleotidyl transferase PN96_00295 PF00196 Bacterial regulatory proteins, luxR family PN96_00300 PF00436 Single-strand binding protein family PN96_00305 PF17157 Gammaproteobacterial periplasmic sensor domain PN96_00305 PF00990 Diguanylate cyclase, GGDEF domain PN96_00305 PF00563 EAL domain PN96_00325 PF07660 Secretin and TonB N terminus short domain PN96_00325 PF03958 Bacterial type II/III secretion system short domain PN96_00325 PF00263 Bacterial type II and III secretion system protein PN96_00325 PF11741 AMIN domain PN96_00330 PF13401 AAA domain PN96_00330 PF01471 Putative peptidoglycan binding domain PN96_00340 PF00437 Type II/IV secretion system protein PN96_00340 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain PN96_00345 PF00482 Type II secretion system (T2SS), protein F PN96_00355 PF08334 Type II secretion system (T2SS), protein G PN96_00355 PF07963 Prokaryotic N-terminal methylation motif PN96_00395 PF04085 rod shape-determining protein MreC PN96_00400 PF04093 rod shape-determining protein MreD PN96_00405 PF02545 Maf-like protein PN96_00410 PF10150 Ribonuclease E/G family PN96_00410 PF00575 S1 RNA binding domain PN96_00415 PF13116 Protein of unknown function PN96_00415 PF13502 AsmA-like C-terminal region PN96_00420 PF00795 Carbon-nitrogen hydrolase PN96_00425 PF01523 Putative modulator of DNA gyrase PN96_00430 PF13638 PIN domain PN96_00430 PF02562 PhoH-like protein PN96_00435 PF18339 RapA N-terminal Tudor like domain 1 PN96_00435 PF00176 SNF2 family N-terminal domain PN96_00435 PF00271 Helicase conserved C-terminal domain PN96_00435 PF18337 RapA N-terminal Tudor like domain PN96_00435 PF12137 RNA polymerase recycling family C-terminal PN96_00445 PF00849 RNA pseudouridylate synthase PN96_00450 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PN96_00450 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PN96_00455 PF04751 Protein of unknown function (DUF615) PN96_00460 PF01523 Putative modulator of DNA gyrase PN96_00465 PF03448 MgtE intracellular N domain PN96_00465 PF01769 Divalent cation transporter PN96_00465 PF00571 CBS domain PN96_00470 PF00381 PTS HPr component phosphorylation site PN96_00475 PF03668 P-loop ATPase protein family PN96_00480 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PN96_00485 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein PN96_00490 PF00309 Sigma-54 factor, Activator interacting domain (AID) PN96_00490 PF04552 Sigma-54, DNA binding domain PN96_00490 PF04963 Sigma-54 factor, core binding domain PN96_00495 PF00005 ABC transporter PN96_00495 PF12399 Branched-chain amino acid ATP-binding cassette transporter PN96_00500 PF03968 OstA-like protein PN96_00510 PF00571 CBS domain PN96_00510 PF01380 SIS domain PN96_00515 PF01699 Sodium/calcium exchanger protein PN96_00520 PF00005 ABC transporter PN96_00525 PF02405 Permease MlaE PN96_00530 PF02470 MlaD protein PN96_00535 PF05494 MlaC protein PN96_00545 PF01722 BolA-like protein PN96_00550 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PN96_00555 PF01553 Acyltransferase PN96_00560 PF01042 Endoribonuclease L-PSP PN96_00565 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain PN96_00565 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain PN96_00570 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PN96_00570 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PN96_00575 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PN96_00575 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PN96_00585 PF06877 Regulator of ribonuclease activity B PN96_00595 PF00583 Acetyltransferase (GNAT) family PN96_00605 PF08264 Anticodon-binding domain of tRNA PN96_00605 PF00133 tRNA synthetases class I (I, L, M and V) PN96_00605 PF10458 Valyl tRNA synthetase tRNA binding arm PN96_00610 PF04364 DNA polymerase III chi subunit, HolC PN96_00615 PF02789 Cytosol aminopeptidase family, N-terminal domain PN96_00615 PF00883 Cytosol aminopeptidase family, catalytic domain PN96_00620 PF03739 Lipopolysaccharide export system permease LptF/LptG PN96_00625 PF03739 Lipopolysaccharide export system permease LptF/LptG PN96_00635 PF10011 Predicted membrane protein (DUF2254) PN96_00640 PF00106 short chain dehydrogenase PN96_00650 PF01758 Sodium Bile acid symporter family PN96_00655 PF00106 short chain dehydrogenase PN96_00730 PF00672 HAMP domain PN96_00730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PN96_00730 PF17200 Single Cache domain 2 PN96_00770 PF01464 Transglycosylase SLT domain PN96_00770 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain PN96_00775 PF04362 Bacterial Fe(2+) trafficking PN96_00780 PF14815 NUDIX domain PN96_00780 PF00730 HhH-GPD superfamily base excision DNA repair protein PN96_00780 PF00633 Helix-hairpin-helix motif PN96_00785 PF02390 Putative methyltransferase PN96_00790 PF02086 D12 class N6 adenine-specific DNA methyltransferase PN96_00795 PF04960 Glutaminase PN96_00800 PF06969 HemN C-terminal domain PN96_00800 PF04055 Radical SAM superfamily PN96_00805 PF01725 Ham1 family PN96_00815 PF02594 Uncharacterised ACR, YggU family COG1872 PN96_00820 PF02325 YGGT family PN96_00825 PF03807 NADP oxidoreductase coenzyme F420-dependent PN96_00825 PF14748 Pyrroline-5-carboxylate reductase dimerisation PN96_00830 PF01168 Alanine racemase, N-terminal domain PN96_00835 PF00437 Type II/IV secretion system protein PN96_00840 PF00437 Type II/IV secretion system protein PN96_00845 PF03652 Holliday junction resolvase PN96_00850 PF02622 Uncharacterized ACR, COG1678 PN96_00855 PF02951 Prokaryotic glutathione synthetase, N-terminal domain PN96_00855 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain PN96_00860 PF04452 RNA methyltransferase PN96_00865 PF04231 Endonuclease I PN96_00870 PF17283 SprT-like zinc ribbon domain PN96_00870 PF10263 SprT-like family PN96_00880 PF00438 S-adenosylmethionine synthetase, N-terminal domain PN96_00880 PF02773 S-adenosylmethionine synthetase, C-terminal domain PN96_00880 PF02772 S-adenosylmethionine synthetase, central domain PN96_00890 PF02779 Transketolase, pyrimidine binding domain PN96_00890 PF02780 Transketolase, C-terminal domain PN96_00890 PF00456 Transketolase, thiamine diphosphate binding domain PN96_00895 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PN96_00895 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PN96_00900 PF00162 Phosphoglycerate kinase PN96_00905 PF01116 Fructose-bisphosphate aldolase class-II PN96_00910 PF05552 Conserved TM helix PN96_00910 PF00924 Mechanosensitive ion channel PN96_00915 PF01810 LysE type translocator PN96_00920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_00920 PF03466 LysR substrate binding domain PN96_00925 PF04402 Protein of unknown function (DUF541) PN96_00930 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PN96_00930 PF01842 ACT domain PN96_00930 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PN96_00935 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) PN96_00940 PF01812 5-formyltetrahydrofolate cyclo-ligase family PN96_00945 PF05164 Cell division protein ZapA PN96_00950 PF03695 Uncharacterised protein family (UPF0149) PN96_00955 PF01494 FAD binding domain PN96_00960 PF01494 FAD binding domain PN96_00975 PF01571 Aminomethyltransferase folate-binding domain PN96_00980 PF03937 Flavinator of succinate dehydrogenase PN96_00990 PF02910 Fumarate reductase flavoprotein C-term PN96_00990 PF00890 FAD binding domain PN96_00995 PF04542 Sigma-70 region 2 PN96_00995 PF08281 Sigma-70, region 4 PN96_01000 PF03873 Anti sigma-E protein RseA, C-terminal domain PN96_01000 PF03872 Anti sigma-E protein RseA, N-terminal domain PN96_01005 PF17188 MucB/RseB C-terminal domain PN96_01005 PF03888 MucB/RseB N-terminal domain PN96_01015 PF03144 Elongation factor Tu domain 2 PN96_01015 PF06421 GTP-binding protein LepA C-terminus PN96_01015 PF00679 Elongation factor G C-terminus PN96_01015 PF00009 Elongation factor Tu GTP binding domain PN96_01020 PF10502 Signal peptidase, peptidase S26 PN96_01025 PF00035 Double-stranded RNA binding motif PN96_01025 PF14622 Ribonuclease-III-like PN96_01030 PF07650 KH domain PN96_01030 PF01926 50S ribosome-binding GTPase PN96_01035 PF11967 Recombination protein O N terminal PN96_01035 PF02565 Recombination protein O C terminal PN96_01040 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ PN96_01045 PF01648 4'-phosphopantetheinyl transferase superfamily PN96_01050 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) PN96_01050 PF00072 Response regulator receiver domain PN96_01050 PF01627 Hpt domain PN96_01050 PF00512 His Kinase A (phospho-acceptor) domain PN96_01050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PN96_01050 PF00672 HAMP domain PN96_01055 PF05958 tRNA (Uracil-5-)-methyltransferase PN96_01055 PF01938 TRAM domain PN96_01060 PF02824 TGS domain PN96_01060 PF04607 Region found in RelA / SpoT proteins PN96_01060 PF13291 ACT domain PN96_01065 PF03819 MazG nucleotide pyrophosphohydrolase domain PN96_01070 PF00117 Glutamine amidotransferase class-I PN96_01070 PF06418 CTP synthase N-terminus PN96_01075 PF00113 Enolase, C-terminal TIM barrel domain PN96_01075 PF03952 Enolase, N-terminal domain PN96_01080 PF04977 Septum formation initiator PN96_01085 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase PN96_01090 PF02542 YgbB family PN96_01095 PF01142 tRNA pseudouridine synthase D (TruD) PN96_01100 PF01975 Survival protein SurE PN96_01110 PF01551 Peptidase family M23 PN96_01110 PF01476 LysM domain PN96_01115 PF00140 Sigma-70 factor, region 1.2 PN96_01115 PF04542 Sigma-70 region 2 PN96_01115 PF04539 Sigma-70 region 3 PN96_01115 PF04545 Sigma-70, region 4 PN96_01120 PF00488 MutS domain V PN96_01120 PF05192 MutS domain III PN96_01120 PF05188 MutS domain II PN96_01120 PF05190 MutS family domain IV PN96_01120 PF01624 MutS domain I PN96_01125 PF02464 Competence-damaged protein PN96_01130 PF00154 recA bacterial DNA recombination protein PN96_01135 PF02631 RecX family PN96_01140 PF02272 DHHA1 domain PN96_01140 PF01411 tRNA synthetases class II (A) PN96_01140 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PN96_01145 PF13840 ACT domain PN96_01145 PF00696 Amino acid kinase family PN96_01145 PF01842 ACT domain PN96_01150 PF02599 Global regulator protein family PN96_01205 PF04277 Oxaloacetate decarboxylase, gamma chain PN96_01210 PF02436 Conserved carboxylase domain PN96_01210 PF00682 HMGL-like PN96_01210 PF00364 Biotin-requiring enzyme PN96_01215 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit PN96_01220 PF08240 Alcohol dehydrogenase GroES-like domain PN96_01220 PF00107 Zinc-binding dehydrogenase PN96_01225 PF09335 SNARE associated Golgi protein PN96_01230 PF05193 Peptidase M16 inactive domain PN96_01230 PF00675 Insulinase (Peptidase family M16) PN96_01235 PF04262 Glutamate-cysteine ligase PN96_01245 PF02664 S-Ribosylhomocysteinase (LuxS) PN96_01250 PF03471 Transporter associated domain PN96_01250 PF01595 Cyclin M transmembrane N-terminal domain PN96_01250 PF00571 CBS domain PN96_01255 PF01578 Cytochrome C assembly protein PN96_01260 PF00448 SRP54-type protein, GTPase domain PN96_01260 PF02881 SRP54-type protein, helical bundle domain PN96_01260 PF02978 Signal peptide binding domain PN96_01265 PF00886 Ribosomal protein S16 PN96_01270 PF05239 PRC-barrel domain PN96_01270 PF01782 RimM N-terminal domain PN96_01275 PF01746 tRNA (Guanine-1)-methyltransferase PN96_01280 PF01245 Ribosomal protein L19 PN96_01285 PF03884 DNA gyrase inhibitor YacG PN96_01290 PF07072 Cell division protein PN96_01295 PF01121 Dephospho-CoA kinase PN96_01300 PF06750 Bacterial Peptidase A24 N-terminal domain PN96_01300 PF01478 Type IV leader peptidase family PN96_01305 PF00482 Type II secretion system (T2SS), protein F PN96_01310 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain PN96_01310 PF00437 Type II/IV secretion system protein PN96_01315 PF07963 Prokaryotic N-terminal methylation motif PN96_01315 PF00114 Pilin (bacterial filament) PN96_01320 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain PN96_01320 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain PN96_01325 PF01510 N-acetylmuramoyl-L-alanine amidase PN96_01330 PF00392 Bacterial regulatory proteins, gntR family PN96_01330 PF07729 FCD domain PN96_01335 PF00456 Transketolase, thiamine diphosphate binding domain PN96_01335 PF17831 Pyruvate dehydrogenase E1 component middle domain PN96_01340 PF02817 e3 binding domain PN96_01340 PF00364 Biotin-requiring enzyme PN96_01340 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PN96_01345 PF07992 Pyridine nucleotide-disulphide oxidoreductase PN96_01345 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PN96_01350 PF00440 Bacterial regulatory proteins, tetR family PN96_01355 PF00156 Phosphoribosyl transferase domain PN96_01360 PF00484 Carbonic anhydrase PN96_01365 PF01740 STAS domain PN96_01365 PF00916 Sulfate permease family PN96_01370 PF00005 ABC transporter PN96_01375 PF01061 ABC-2 type transporter PN96_01380 PF02569 Pantoate-beta-alanine ligase PN96_01385 PF02548 Ketopantoate hydroxymethyltransferase PN96_01390 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) PN96_01395 PF12627 Probable RNA and SrmB- binding site of polymerase A PN96_01395 PF12626 Polymerase A arginine-rich C-terminus PN96_01395 PF01743 Poly A polymerase head domain PN96_01400 PF00749 tRNA synthetases class I (E and Q), catalytic domain PN96_01405 PF01258 Prokaryotic dksA/traR C4-type zinc finger PN96_01410 PF03749 Sugar fermentation stimulation protein RE domain PN96_01410 PF17746 SfsA N-terminal OB domain PN96_01415 PF08482 ATP-dependent helicase C-terminal PN96_01415 PF00271 Helicase conserved C-terminal domain PN96_01415 PF00270 DEAD/DEAH box helicase PN96_01415 PF04408 Helicase associated domain (HA2) PN96_01420 PF14814 Bifunctional transglycosylase second domain PN96_01420 PF00905 Penicillin binding protein transpeptidase domain PN96_01420 PF00912 Transglycosylase PN96_01425 PF01734 Patatin-like phospholipase PN96_01430 PF11791 Aconitate B N-terminal domain PN96_01430 PF06434 Aconitate hydratase 2 N-terminus PN96_01430 PF00330 Aconitase family (aconitate hydratase) PN96_01435 PF02595 Glycerate kinase family PN96_01440 PF02447 GntP family permease PN96_01445 PF05651 Putative sugar diacid recognition PN96_01445 PF17853 GGDEF-like domain PN96_01445 PF13556 PucR C-terminal helix-turn-helix domain PN96_01450 PF06062 Uncharacterised protein family (UPF0231) PN96_01455 PF00543 Nitrogen regulatory protein P-II PN96_01460 PF00909 Ammonium Transporter Family PN96_01465 PF13416 Bacterial extracellular solute-binding protein PN96_01475 PF08402 TOBE domain PN96_01475 PF00005 ABC transporter PN96_01480 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PN96_01480 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PN96_01480 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PN96_01480 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PN96_01485 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain PN96_01485 PF06165 Glycosyltransferase family 36 PN96_01490 PF02838 Glycosyl hydrolase family 20, domain 2 PN96_01490 PF00728 Glycosyl hydrolase family 20, catalytic domain PN96_01495 PF01869 BadF/BadG/BcrA/BcrD ATPase family PN96_01505 PF00005 ABC transporter PN96_01505 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PN96_01510 PF00005 ABC transporter PN96_01510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PN96_01515 PF00528 Binding-protein-dependent transport system inner membrane component PN96_01515 PF12911 N-terminal TM domain of oligopeptide transport permease C PN96_01520 PF00528 Binding-protein-dependent transport system inner membrane component PN96_01525 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PN96_01530 PF00072 Response regulator receiver domain PN96_01530 PF09308 LuxQ, periplasmic PN96_01530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PN96_01530 PF00512 His Kinase A (phospho-acceptor) domain PN96_01540 PF08468 Methyltransferase small domain N-terminal PN96_01540 PF05175 Methyltransferase small domain PN96_01545 PF01594 AI-2E family transporter PN96_01550 PF00202 Aminotransferase class-III PN96_01555 PF01521 Iron-sulphur cluster biosynthesis PN96_01560 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PN96_01565 PF00873 AcrB/AcrD/AcrF family PN96_01570 PF01476 LysM domain PN96_01570 PF08525 Opacity-associated protein A N-terminal motif PN96_01570 PF01551 Peptidase family M23 PN96_01575 PF00579 tRNA synthetases class I (W and Y) PN96_01585 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family PN96_01590 PF13609 Gram-negative porin PN96_01595 PF03449 Transcription elongation factor, N-terminal PN96_01595 PF01272 Transcription elongation factor, GreA/GreB, C-term PN96_01600 PF01985 CRS1 / YhbY (CRM) domain PN96_01605 PF01728 FtsJ-like methyltransferase PN96_01610 PF01434 Peptidase family M41 PN96_01610 PF17862 AAA+ lid domain PN96_01610 PF00004 ATPase family associated with various cellular activities (AAA) PN96_01610 PF06480 FtsH Extracellular PN96_01615 PF00809 Pterin binding enzyme PN96_01620 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PN96_01620 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PN96_01620 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PN96_01620 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PN96_01625 PF03840 Preprotein translocase SecG subunit PN96_01640 PF02576 RimP N-terminal domain PN96_01640 PF17384 RimP C-terminal SH3 domain PN96_01645 PF00575 S1 RNA binding domain PN96_01645 PF08529 NusA N-terminal domain PN96_01645 PF13184 NusA-like KH domain PN96_01650 PF04760 Translation initiation factor IF-2, N-terminal region PN96_01650 PF11987 Translation-initiation factor 2 PN96_01650 PF00009 Elongation factor Tu GTP binding domain PN96_01650 PF08364 Bacterial translation initiation factor IF-2 associated region PN96_01655 PF02033 Ribosome-binding factor A PN96_01660 PF16198 tRNA pseudouridylate synthase B C-terminal domain PN96_01660 PF01509 TruB family pseudouridylate synthase (N terminal domain) PN96_01660 PF09157 Pseudouridine synthase II TruB, C-terminal PN96_01665 PF00312 Ribosomal protein S15 PN96_01670 PF00013 KH domain PN96_01670 PF01138 3' exoribonuclease family, domain 1 PN96_01670 PF03725 3' exoribonuclease family, domain 2 PN96_01670 PF00575 S1 RNA binding domain PN96_01670 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain PN96_01675 PF13181 Tetratricopeptide repeat PN96_01675 PF07719 Tetratricopeptide repeat PN96_01680 PF01554 MatE PN96_01695 PF00563 EAL domain PN96_01695 PF00990 Diguanylate cyclase, GGDEF domain PN96_01695 PF03707 Bacterial signalling protein N terminal repeat PN96_01705 PF13508 Acetyltransferase (GNAT) domain PN96_01720 PF03144 Elongation factor Tu domain 2 PN96_01720 PF16658 Class II release factor RF3, C-terminal domain PN96_01720 PF00009 Elongation factor Tu GTP binding domain PN96_01730 PF01026 TatD related DNase PN96_01735 PF07662 Na+ dependent nucleoside transporter C-terminus PN96_01735 PF07670 Nucleoside recognition PN96_01735 PF01773 Na+ dependent nucleoside transporter N-terminus PN96_01740 PF01791 DeoC/LacD family aldolase PN96_01745 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain PN96_01745 PF02885 Glycosyl transferase family, helical bundle domain PN96_01745 PF00591 Glycosyl transferase family, a/b domain PN96_01750 PF01676 Metalloenzyme superfamily PN96_01755 PF01048 Phosphorylase superfamily PN96_01765 PF18429 Domain of unknown function (DUF5609) PN96_01775 PF18073 Rubredoxin metal binding domain PN96_01780 PF03764 Elongation factor G, domain IV PN96_01780 PF00009 Elongation factor Tu GTP binding domain PN96_01780 PF00679 Elongation factor G C-terminus PN96_01780 PF03144 Elongation factor Tu domain 2 PN96_01780 PF14492 Elongation Factor G, domain II PN96_01785 PF03466 LysR substrate binding domain PN96_01785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_01795 PF00501 AMP-binding enzyme PN96_01800 PF12833 Helix-turn-helix domain PN96_01800 PF02805 Metal binding domain of Ada PN96_01825 PF13629 Pilus formation protein N terminal region PN96_01825 PF00263 Bacterial type II and III secretion system protein PN96_01825 PF04972 BON domain PN96_01855 PF00437 Type II/IV secretion system protein PN96_01875 PF00535 Glycosyl transferase family 2 PN96_01880 PF04138 GtrA-like protein PN96_01910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_01910 PF03466 LysR substrate binding domain PN96_01915 PF00356 Bacterial regulatory proteins, lacI family PN96_01920 PF00356 Bacterial regulatory proteins, lacI family PN96_01940 PF01544 CorA-like Mg2+ transporter protein PN96_01945 PF16901 C-terminal domain of alpha-glycerophosphate oxidase PN96_01945 PF01266 FAD dependent oxidoreductase PN96_01950 PF08220 DeoR-like helix-turn-helix domain PN96_01950 PF00455 DeoR C terminal sensor domain PN96_01955 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PN96_01955 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PN96_01960 PF00230 Major intrinsic protein PN96_01965 PF07690 Major Facilitator Superfamily PN96_01970 PF03009 Glycerophosphoryl diester phosphodiesterase family PN96_01975 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle PN96_01975 PF14602 Hexapeptide repeat of succinyl-transferase PN96_01985 PF07130 YebG protein PN96_01990 PF03466 LysR substrate binding domain PN96_01990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_02000 PF11893 Domain of unknown function (DUF3413) PN96_02000 PF00884 Sulfatase PN96_02005 PF17946 RecC C-terminal domain PN96_02010 PF00580 UvrD/REP helicase N-terminal domain PN96_02010 PF12705 PD-(D/E)XK nuclease superfamily PN96_02010 PF13361 UvrD-like helicase C-terminal domain PN96_02015 PF13538 UvrD-like helicase C-terminal domain PN96_02020 PF00696 Amino acid kinase family PN96_02020 PF00583 Acetyltransferase (GNAT) family PN96_02030 PF06725 3D domain PN96_02030 PF03562 MltA specific insert domain PN96_02035 PF00899 ThiF family PN96_02040 PF02657 Fe-S metabolism associated domain PN96_02045 PF17151 Periplasmic sensor domain PN96_02045 PF00990 Diguanylate cyclase, GGDEF domain PN96_02050 PF00266 Aminotransferase class-V PN96_02055 PF01965 DJ-1/PfpI family PN96_02060 PF02558 Ketopantoate reductase PanE/ApbA PN96_02060 PF08546 Ketopantoate reductase PanE/ApbA C terminal PN96_02065 PF03502 Nucleoside-specific channel-forming protein, Tsx PN96_02080 PF04542 Sigma-70 region 2 PN96_02080 PF04545 Sigma-70, region 4 PN96_02090 PF07690 Major Facilitator Superfamily PN96_02095 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PN96_02105 PF05175 Methyltransferase small domain PN96_02110 PF01722 BolA-like protein PN96_02115 PF11973 NQRA C-terminal domain PN96_02115 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) PN96_02120 PF03116 NQR2, RnfD, RnfE family PN96_02125 PF04205 FMN-binding domain PN96_02130 PF02508 Rnf-Nqr subunit, membrane protein PN96_02135 PF02508 Rnf-Nqr subunit, membrane protein PN96_02140 PF00175 Oxidoreductase NAD-binding domain PN96_02140 PF00111 2Fe-2S iron-sulfur cluster binding domain PN96_02140 PF00970 Oxidoreductase FAD-binding domain PN96_02145 PF02424 ApbE family PN96_02150 PF04400 (Na+)-NQR maturation NqrM PN96_02160 PF11798 IMS family HHH motif PN96_02160 PF11799 impB/mucB/samB family C-terminal domain PN96_02160 PF00817 impB/mucB/samB family PN96_02165 PF00570 HRDC domain PN96_02165 PF00270 DEAD/DEAH box helicase PN96_02165 PF00271 Helicase conserved C-terminal domain PN96_02165 PF16124 RecQ zinc-binding PN96_02165 PF09382 RQC domain PN96_02170 PF03449 Transcription elongation factor, N-terminal PN96_02170 PF01272 Transcription elongation factor, GreA/GreB, C-term PN96_02180 PF00209 Sodium:neurotransmitter symporter family PN96_02190 PF06786 Uncharacterised protein family (UPF0253) PN96_02195 PF03129 Anticodon binding domain PN96_02195 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PN96_02195 PF04073 Aminoacyl-tRNA editing domain PN96_02200 PF01980 tRNA-methyltransferase O PN96_02200 PF18389 TrmO C-terminal domain PN96_02205 PF01197 Ribosomal protein L31 PN96_02210 PF03806 AbgT putative transporter family PN96_02215 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 PN96_02240 PF00849 RNA pseudouridylate synthase PN96_02245 PF11944 Protein of unknown function (DUF3461) PN96_02250 PF08335 GlnD PII-uridylyltransferase PN96_02250 PF01842 ACT domain PN96_02250 PF01966 HD domain PN96_02250 PF01909 Nucleotidyltransferase domain PN96_02255 PF00557 Metallopeptidase family M24 PN96_02260 PF00318 Ribosomal protein S2 PN96_02265 PF00889 Elongation factor TS PN96_02270 PF00696 Amino acid kinase family PN96_02275 PF01765 Ribosome recycling factor PN96_02280 PF01255 Putative undecaprenyl diphosphate synthase PN96_02290 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain PN96_02290 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase PN96_02290 PF13288 DXP reductoisomerase C-terminal domain PN96_02295 PF17820 PDZ domain PN96_02295 PF02163 Peptidase family M50 PN96_02300 PF07244 Surface antigen variable number repeat PN96_02300 PF01103 Surface antigen PN96_02305 PF03938 Outer membrane protein (OmpH-like) PN96_02310 PF00132 Bacterial transferase hexapeptide (six repeats) PN96_02310 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD PN96_02315 PF07977 FabA-like domain PN96_02320 PF00132 Bacterial transferase hexapeptide (six repeats) PN96_02320 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 PN96_02325 PF02684 Lipid-A-disaccharide synthetase PN96_02330 PF01351 Ribonuclease HII PN96_02335 PF17657 Bacterial DNA polymerase III alpha subunit finger domain PN96_02335 PF01336 OB-fold nucleic acid binding domain PN96_02335 PF02811 PHP domain PN96_02335 PF14579 Helix-hairpin-helix motif PN96_02335 PF07733 Bacterial DNA polymerase III alpha NTPase domain PN96_02340 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit PN96_02345 PF01171 PP-loop family PN96_02345 PF09179 TilS substrate binding domain PN96_02345 PF11734 TilS substrate C-terminal domain PN96_02350 PF00034 Cytochrome c PN96_02355 PF00543 Nitrogen regulatory protein P-II PN96_02360 PF03372 Endonuclease/Exonuclease/phosphatase family PN96_02370 PF01464 Transglycosylase SLT domain PN96_02370 PF01476 LysM domain PN96_02375 PF16123 Hydroxyacylglutathione hydrolase C-terminus PN96_02375 PF00753 Metallo-beta-lactamase superfamily PN96_02380 PF08241 Methyltransferase domain PN96_02385 PF00075 RNase H PN96_02390 PF00929 Exonuclease PN96_02400 PF01740 STAS domain PN96_02400 PF00916 Sulfate permease family PN96_02405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PN96_02405 PF02770 Acyl-CoA dehydrogenase, middle domain PN96_02405 PF09317 Domain of unknown function (DUF1974) PN96_02405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PN96_02410 PF13580 SIS domain PN96_02415 PF13230 Glutamine amidotransferases class-II PN96_02420 PF00551 Formyl transferase PN96_02425 PF02769 AIR synthase related protein, C-terminal domain PN96_02425 PF00586 AIR synthase related protein, N-terminal domain PN96_02435 PF00860 Permease family PN96_02450 PF03358 NADPH-dependent FMN reductase PN96_02455 PF03960 ArsC family PN96_02460 PF01435 Peptidase family M48 PN96_02460 PF13181 Tetratricopeptide repeat PN96_02470 PF01594 AI-2E family transporter PN96_02475 PF00578 AhpC/TSA family PN96_02480 PF01842 ACT domain PN96_02485 PF00701 Dihydrodipicolinate synthetase family PN96_02490 PF06804 NlpB/DapX lipoprotein PN96_02505 PF07687 Peptidase dimerisation domain PN96_02505 PF01546 Peptidase family M20/M25/M40 PN96_02510 PF03960 ArsC family PN96_02520 PF13698 Domain of unknown function (DUF4156) PN96_02530 PF11143 Protein of unknown function (DUF2919) PN96_02535 PF04261 Dyp-type peroxidase family PN96_02540 PF00669 Bacterial flagellin N-terminal helical region PN96_02540 PF07196 Flagellin hook IN motif PN96_02540 PF00700 Bacterial flagellin C-terminal helical region PN96_02545 PF00700 Bacterial flagellin C-terminal helical region PN96_02545 PF07196 Flagellin hook IN motif PN96_02545 PF00669 Bacterial flagellin N-terminal helical region PN96_02550 PF00700 Bacterial flagellin C-terminal helical region PN96_02550 PF07196 Flagellin hook IN motif PN96_02550 PF00669 Bacterial flagellin N-terminal helical region PN96_02555 PF03646 FlaG protein PN96_02560 PF07196 Flagellin hook IN motif PN96_02560 PF02465 Flagellar hook-associated protein 2 N-terminus PN96_02560 PF07195 Flagellar hook-associated protein 2 C-terminus PN96_02570 PF02561 Flagellar protein FliS PN96_02580 PF01590 GAF domain PN96_02580 PF02954 Bacterial regulatory protein, Fis family PN96_02580 PF00158 Sigma-54 interaction domain PN96_02585 PF00512 His Kinase A (phospho-acceptor) domain PN96_02585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PN96_02590 PF00072 Response regulator receiver domain PN96_02590 PF02954 Bacterial regulatory protein, Fis family PN96_02590 PF00158 Sigma-54 interaction domain PN96_02595 PF02049 Flagellar hook-basal body complex protein FliE PN96_02600 PF01514 Secretory protein of YscJ/FliF family PN96_02600 PF08345 Flagellar M-ring protein C-terminal PN96_02605 PF14842 FliG N-terminal domain PN96_02605 PF14841 FliG middle domain PN96_02605 PF01706 FliG C-terminal domain PN96_02615 PF18269 T3SS EscN ATPase C-terminal domain PN96_02615 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PN96_02635 PF02154 Flagellar motor switch protein FliM PN96_02635 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term PN96_02640 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term PN96_02645 PF04347 Flagellar biosynthesis protein, FliO PN96_02650 PF00813 FliP family PN96_02655 PF01313 Bacterial export proteins, family 3 PN96_02660 PF01311 Bacterial export proteins, family 1 PN96_02665 PF01312 FlhB HrpN YscU SpaS Family PN96_02670 PF00771 FHIPEP family PN96_02675 PF00448 SRP54-type protein, GTPase domain PN96_02680 PF10609 NUBPL iron-transfer P-loop NTPase PN96_02685 PF04542 Sigma-70 region 2 PN96_02685 PF04539 Sigma-70 region 3 PN96_02685 PF04545 Sigma-70, region 4 PN96_02690 PF00072 Response regulator receiver domain PN96_02695 PF04344 Chemotaxis phosphatase, CheZ PN96_02700 PF07194 P2 response regulator binding domain PN96_02700 PF01584 CheW-like domain PN96_02700 PF02895 Signal transducing histidine kinase, homodimeric domain PN96_02700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PN96_02700 PF01627 Hpt domain PN96_02705 PF01339 CheB methylesterase PN96_02705 PF00072 Response regulator receiver domain PN96_02710 PF13614 AAA domain PN96_02720 PF01584 CheW-like domain PN96_02730 PF00005 ABC transporter PN96_02735 PF03379 CcmB protein PN96_02740 PF01578 Cytochrome C assembly protein PN96_02745 PF04995 Heme exporter protein D (CcmD) PN96_02750 PF03100 CcmE PN96_02755 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal PN96_02755 PF01578 Cytochrome C assembly protein PN96_02760 PF08534 Redoxin PN96_02765 PF03918 Cytochrome C biogenesis protein PN96_02775 PF04333 MlaA lipoprotein PN96_02780 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) PN96_02785 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) PN96_02795 PF08281 Sigma-70, region 4 PN96_02795 PF04542 Sigma-70 region 2 PN96_02800 PF02803 Thiolase, C-terminal domain PN96_02800 PF00108 Thiolase, N-terminal domain PN96_02805 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PN96_02805 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PN96_02805 PF00378 Enoyl-CoA hydratase/isomerase PN96_02815 PF05193 Peptidase M16 inactive domain PN96_02815 PF00675 Insulinase (Peptidase family M16) PN96_02815 PF16187 Middle or third domain of peptidase_M16 PN96_02820 PF00300 Histidine phosphatase superfamily (branch 1) PN96_02825 PF01713 Smr domain PN96_02830 PF05175 Methyltransferase small domain PN96_02835 PF01264 Chorismate synthase PN96_02840 PF03458 UPF0126 domain PN96_02845 PF04315 Elongation factor P hydroxylase PN96_02850 PF08891 YfcL protein PN96_02855 PF03358 NADPH-dependent FMN reductase PN96_02860 PF05430 S-adenosyl-L-methionine-dependent methyltransferase PN96_02860 PF01266 FAD dependent oxidoreductase PN96_02865 PF02801 Beta-ketoacyl synthase, C-terminal domain PN96_02865 PF00109 Beta-ketoacyl synthase, N-terminal domain PN96_02880 PF00455 DeoR C terminal sensor domain PN96_02880 PF08220 DeoR-like helix-turn-helix domain PN96_02890 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PN96_02895 PF11890 Domain of unknown function (DUF3410) PN96_02895 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PN96_02895 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PN96_02900 PF01118 Semialdehyde dehydrogenase, NAD binding domain PN96_02900 PF02774 Semialdehyde dehydrogenase, dimerisation domain PN96_02910 PF01416 tRNA pseudouridine synthase PN96_02915 PF01039 Carboxyl transferase domain PN96_02915 PF17848 Acetyl-coA carboxylase zinc finger domain PN96_02920 PF02875 Mur ligase family, glutamate ligase domain PN96_02920 PF08245 Mur ligase middle domain PN96_02925 PF05036 Sporulation related domain PN96_02930 PF02674 Colicin V production protein PN96_02935 PF00156 Phosphoribosyl transferase domain PN96_02940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_02940 PF03466 LysR substrate binding domain PN96_02945 PF00072 Response regulator receiver domain PN96_02955 PF04304 Protein of unknown function (DUF454) PN96_02960 PF00156 Phosphoribosyl transferase domain PN96_02965 PF12170 DNA polymerase III tau subunit V interacting with alpha PN96_02965 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding PN96_02965 PF12169 DNA polymerase III subunits gamma and tau domain III PN96_02970 PF02575 YbaB/EbfC DNA-binding family PN96_02975 PF02132 RecR protein PN96_02975 PF13662 Toprim domain PN96_02980 PF00230 Major intrinsic protein PN96_02985 PF03692 Putative zinc- or iron-chelating domain PN96_02990 PF04226 Transglycosylase associated protein PN96_02995 PF03692 Putative zinc- or iron-chelating domain PN96_03000 PF00924 Mechanosensitive ion channel PN96_03000 PF05552 Conserved TM helix PN96_03005 PF00245 Alkaline phosphatase PN96_03020 PF13847 Methyltransferase domain PN96_03025 PF01263 Aldose 1-epimerase PN96_03030 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PN96_03030 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PN96_03035 PF01641 SelR domain PN96_03045 PF07023 Protein of unknown function (DUF1315) PN96_03050 PF17763 Glutaminase/Asparaginase C-terminal domain PN96_03050 PF00710 Asparaginase, N-terminal PN96_03055 PF01343 Peptidase family S49 PN96_03060 PF07992 Pyridine nucleotide-disulphide oxidoreductase PN96_03060 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PN96_03065 PF00881 Nitroreductase family PN96_03070 PF01751 Toprim domain PN96_03070 PF01131 DNA topoisomerase PN96_03075 PF00106 short chain dehydrogenase PN96_03080 PF00850 Histone deacetylase domain PN96_03085 PF00005 ABC transporter PN96_03090 PF00528 Binding-protein-dependent transport system inner membrane component PN96_03095 PF00497 Bacterial extracellular solute-binding proteins, family 3 PN96_03100 PF01053 Cys/Met metabolism PLP-dependent enzyme PN96_03105 PF01037 Lrp/AsnC ligand binding domain PN96_03110 PF00005 ABC transporter PN96_03115 PF01032 FecCD transport family PN96_03120 PF01032 FecCD transport family PN96_03125 PF00593 TonB dependent receptor PN96_03125 PF07715 TonB-dependent Receptor Plug Domain PN96_03130 PF01497 Periplasmic binding protein PN96_03140 PF11893 Domain of unknown function (DUF3413) PN96_03140 PF00884 Sulfatase PN96_03145 PF07208 Protein of unknown function (DUF1414) PN96_03150 PF04245 37-kD nucleoid-associated bacterial protein PN96_03165 PF03553 Na+/H+ antiporter family PN96_03170 PF02774 Semialdehyde dehydrogenase, dimerisation domain PN96_03170 PF01118 Semialdehyde dehydrogenase, NAD binding domain PN96_03175 PF00027 Cyclic nucleotide-binding domain PN96_03175 PF00520 Ion transport protein PN96_03180 PF01914 MarC family integral membrane protein PN96_03185 PF00465 Iron-containing alcohol dehydrogenase PN96_03185 PF00171 Aldehyde dehydrogenase family PN96_03200 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain PN96_03200 PF02777 Iron/manganese superoxide dismutases, C-terminal domain PN96_03205 PF00462 Glutaredoxin PN96_03215 PF13726 Na+-H+ antiporter family PN96_03215 PF03553 Na+/H+ antiporter family PN96_03220 PF00929 Exonuclease PN96_03225 PF00691 OmpA family PN96_03225 PF18393 MotY N-terminal domain PN96_03230 PF10952 Protein of unknown function (DUF2753) PN96_03235 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PN96_03240 PF00730 HhH-GPD superfamily base excision DNA repair protein PN96_03240 PF10576 Iron-sulfur binding domain of endonuclease III PN96_03240 PF00633 Helix-hairpin-helix motif PN96_03245 PF02508 Rnf-Nqr subunit, membrane protein PN96_03250 PF04205 FMN-binding domain PN96_03255 PF03116 NQR2, RnfD, RnfE family PN96_03260 PF10531 SLBB domain PN96_03260 PF13375 RnfC Barrel sandwich hybrid domain PN96_03260 PF12838 4Fe-4S dicluster domain PN96_03260 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit PN96_03265 PF04060 Putative Fe-S cluster PN96_03270 PF02508 Rnf-Nqr subunit, membrane protein PN96_03280 PF17757 UvrB interaction domain PN96_03280 PF00271 Helicase conserved C-terminal domain PN96_03280 PF12344 Ultra-violet resistance protein B PN96_03280 PF02151 UvrB/uvrC motif PN96_03280 PF04851 Type III restriction enzyme, res subunit PN96_03285 PF02954 Bacterial regulatory protein, Fis family PN96_03285 PF00072 Response regulator receiver domain PN96_03285 PF00158 Sigma-54 interaction domain PN96_03290 PF01627 Hpt domain PN96_03295 PF01933 Uncharacterised protein family UPF0052 PN96_03300 PF06463 Molybdenum Cofactor Synthesis C PN96_03300 PF04055 Radical SAM superfamily PN96_03305 PF00994 Probable molybdopterin binding domain PN96_03310 PF01967 MoaC family PN96_03315 PF02597 ThiS family PN96_03320 PF02391 MoaE protein PN96_03325 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PN96_03335 PF12911 N-terminal TM domain of oligopeptide transport permease C PN96_03335 PF00528 Binding-protein-dependent transport system inner membrane component PN96_03340 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PN96_03340 PF00005 ABC transporter PN96_03345 PF00005 ABC transporter PN96_03345 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PN96_03350 PF13409 Glutathione S-transferase, N-terminal domain PN96_03355 PF13194 Domain of unknown function (DUF4010) PN96_03360 PF01515 Phosphate acetyl/butaryl transferase PN96_03360 PF07085 DRTGG domain PN96_03365 PF00871 Acetokinase family PN96_03370 PF04217 Protein of unknown function, DUF412 PN96_03380 PF02653 Branched-chain amino acid transport system / permease component PN96_03385 PF00005 ABC transporter PN96_03390 PF02903 Alpha amylase, N-terminal ig-like domain PN96_03390 PF00128 Alpha amylase, catalytic domain PN96_03395 PF00990 Diguanylate cyclase, GGDEF domain PN96_03400 PF01207 Dihydrouridine synthase (Dus) PN96_03405 PF02810 SEC-C motif PN96_03405 PF07517 SecA DEAD-like domain PN96_03405 PF01043 SecA preprotein cross-linking domain PN96_03405 PF07516 SecA Wing and Scaffold domain PN96_03410 PF02600 Disulfide bond formation protein DsbB PN96_03415 PF06450 Bacterial Na+/H+ antiporter B (NhaB) PN96_03420 PF00392 Bacterial regulatory proteins, gntR family PN96_03420 PF07840 FadR C-terminal domain PN96_03430 PF01588 Putative tRNA binding domain PN96_03430 PF09334 tRNA synthetases class I (M) PN96_03435 PF10609 NUBPL iron-transfer P-loop NTPase PN96_03440 PF00485 Phosphoribulokinase / Uridine kinase family PN96_03450 PF12557 Cob(I)alamin adenosyltransferase N terminal PN96_03450 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP PN96_03455 PF01451 Low molecular weight phosphotyrosine protein phosphatase PN96_03460 PF00916 Sulfate permease family PN96_03460 PF01740 STAS domain PN96_03465 PF00575 S1 RNA binding domain PN96_03465 PF12111 Polyribonucleotide phosphorylase C terminal PN96_03465 PF10150 Ribonuclease E/G family PN96_03470 PF01479 S4 domain PN96_03470 PF00849 RNA pseudouridylate synthase PN96_03475 PF02545 Maf-like protein PN96_03480 PF02620 Large ribosomal RNA subunit accumulation protein YceD PN96_03485 PF01783 Ribosomal L32p protein family PN96_03490 PF02504 Fatty acid synthesis protein PN96_03495 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal PN96_03495 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PN96_03500 PF00698 Acyl transferase domain PN96_03510 PF00550 Phosphopantetheine attachment site PN96_03515 PF00109 Beta-ketoacyl synthase, N-terminal domain PN96_03515 PF02801 Beta-ketoacyl synthase, C-terminal domain PN96_03520 PF01063 Amino-transferase class IV PN96_03525 PF02618 YceG-like family PN96_03530 PF02223 Thymidylate kinase PN96_03535 PF12169 DNA polymerase III subunits gamma and tau domain III PN96_03540 PF01026 TatD related DNase PN96_03545 PF00367 phosphotransferase system, EIIB PN96_03545 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 PN96_03545 PF02378 Phosphotransferase system, EIIC PN96_03555 PF02378 Phosphotransferase system, EIIC PN96_03555 PF00367 phosphotransferase system, EIIB PN96_03565 PF00209 Sodium:neurotransmitter symporter family PN96_03580 PF01734 Patatin-like phospholipase PN96_03585 PF00224 Pyruvate kinase, barrel domain PN96_03585 PF02887 Pyruvate kinase, alpha/beta domain PN96_03590 PF00480 ROK family PN96_03595 PF07733 Bacterial DNA polymerase III alpha NTPase domain PN96_03595 PF14579 Helix-hairpin-helix motif PN96_03595 PF02811 PHP domain PN96_03595 PF01336 OB-fold nucleic acid binding domain PN96_03595 PF17657 Bacterial DNA polymerase III alpha subunit finger domain PN96_03610 PF00106 short chain dehydrogenase PN96_03615 PF01343 Peptidase family S49 PN96_03615 PF08496 Peptidase family S49 N-terminal PN96_03620 PF02224 Cytidylate kinase PN96_03625 PF00575 S1 RNA binding domain PN96_03630 PF00216 Bacterial DNA-binding protein PN96_03635 PF06305 Lipopolysaccharide assembly protein A domain PN96_03640 PF18073 Rubredoxin metal binding domain PN96_03645 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family PN96_03650 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PN96_03660 PF01370 NAD dependent epimerase/dehydratase family PN96_03665 PF00535 Glycosyl transferase family 2 PN96_03675 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase PN96_03680 PF03886 ABC-type transport auxiliary lipoprotein component PN96_03685 PF02470 MlaD protein PN96_03690 PF04403 Paraquat-inducible protein A PN96_03695 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PN96_03700 PF00034 Cytochrome c PN96_03705 PF01568 Molydopterin dinucleotide binding domain PN96_03705 PF00384 Molybdopterin oxidoreductase PN96_03705 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PN96_03710 PF03916 Polysulphide reductase, NrfD PN96_03715 PF13247 4Fe-4S dicluster domain PN96_03720 PF00512 His Kinase A (phospho-acceptor) domain PN96_03720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PN96_03725 PF00196 Bacterial regulatory proteins, luxR family PN96_03725 PF00072 Response regulator receiver domain PN96_03730 PF08379 Bacterial transglutaminase-like N-terminal region PN96_03730 PF01841 Transglutaminase-like superfamily PN96_03735 PF14403 Circularly permuted ATP-grasp type 2 PN96_03735 PF04168 A predicted alpha-helical domain with a conserved ER motif. PN96_03750 PF14403 Circularly permuted ATP-grasp type 2 PN96_03755 PF00072 Response regulator receiver domain PN96_03755 PF00990 Diguanylate cyclase, GGDEF domain PN96_03760 PF12706 Beta-lactamase superfamily domain PN96_03760 PF17770 Ribonuclease J C-terminal domain PN96_03760 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain PN96_03765 PF08443 RimK-like ATP-grasp domain PN96_03765 PF18030 RimK PreATP-grasp domain PN96_03775 PF02683 Cytochrome C biogenesis protein transmembrane region PN96_03775 PF11412 Disulphide bond corrector protein DsbC PN96_03780 PF00085 Thioredoxin PN96_03795 PF00529 HlyD membrane-fusion protein of T1SS PN96_03795 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PN96_03800 PF03466 LysR substrate binding domain PN96_03800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_03815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PN96_03815 PF00672 HAMP domain PN96_03815 PF00512 His Kinase A (phospho-acceptor) domain PN96_03820 PF00486 Transcriptional regulatory protein, C terminal PN96_03820 PF00072 Response regulator receiver domain PN96_03825 PF08497 Radical SAM N-terminal PN96_03825 PF11842 Domain of unknown function (DUF3362) PN96_03825 PF04055 Radical SAM superfamily PN96_03830 PF08448 PAS fold PN96_03830 PF08447 PAS fold PN96_03830 PF00563 EAL domain PN96_03830 PF00990 Diguanylate cyclase, GGDEF domain PN96_03850 PF08267 Cobalamin-independent synthase, N-terminal domain PN96_03850 PF01717 Cobalamin-independent synthase, Catalytic domain PN96_03860 PF03795 YCII-related domain PN96_03865 PF03061 Thioesterase superfamily PN96_03870 PF04279 Intracellular septation protein A PN96_03880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PN96_03880 PF00072 Response regulator receiver domain PN96_03890 PF00375 Sodium:dicarboxylate symporter family PN96_03895 PF00501 AMP-binding enzyme PN96_03895 PF13193 AMP-binding enzyme C-terminal domain PN96_03900 PF13545 Crp-like helix-turn-helix domain PN96_03900 PF00027 Cyclic nucleotide-binding domain PN96_03905 PF00290 Tryptophan synthase alpha chain PN96_03910 PF00291 Pyridoxal-phosphate dependent enzyme PN96_03915 PF00218 Indole-3-glycerol phosphate synthase PN96_03915 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase PN96_03920 PF02885 Glycosyl transferase family, helical bundle domain PN96_03920 PF00591 Glycosyl transferase family, a/b domain PN96_03925 PF00117 Glutamine amidotransferase class-I PN96_03930 PF00425 chorismate binding enzyme PN96_03930 PF04715 Anthranilate synthase component I, N terminal region PN96_03935 PF08056 Tryptophan operon leader peptide PN96_03940 PF02811 PHP domain PN96_03945 PF01300 Telomere recombination PN96_03955 PF01479 S4 domain PN96_03955 PF00849 RNA pseudouridylate synthase PN96_03960 PF04269 Protein of unknown function, DUF440 PN96_03965 PF09285 Elongation factor P, C-terminal PN96_03965 PF08207 Elongation factor P (EF-P) KOW-like domain PN96_03965 PF01132 Elongation factor P (EF-P) OB domain PN96_03975 PF03104 DNA polymerase family B, exonuclease domain PN96_03975 PF00136 DNA polymerase family B PN96_03980 PF00196 Bacterial regulatory proteins, luxR family PN96_03980 PF00072 Response regulator receiver domain PN96_03985 PF01541 GIY-YIG catalytic domain PN96_03985 PF08459 UvrC Helix-hairpin-helix N-terminal PN96_03985 PF02151 UvrB/uvrC motif PN96_03990 PF01066 CDP-alcohol phosphatidyltransferase PN96_04015 PF00202 Aminotransferase class-III PN96_04020 PF03435 Saccharopine dehydrogenase NADP binding domain PN96_04020 PF16653 Saccharopine dehydrogenase C-terminal domain PN96_04025 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain PN96_04040 PF00994 Probable molybdopterin binding domain PN96_04050 PF12706 Beta-lactamase superfamily domain PN96_04055 PF16363 GDP-mannose 4,6 dehydratase PN96_04060 PF00970 Oxidoreductase FAD-binding domain PN96_04060 PF00175 Oxidoreductase NAD-binding domain PN96_04060 PF00111 2Fe-2S iron-sulfur cluster binding domain PN96_04065 PF00268 Ribonucleotide reductase, small chain PN96_04070 PF00317 Ribonucleotide reductase, all-alpha domain PN96_04070 PF02867 Ribonucleotide reductase, barrel domain PN96_04070 PF03477 ATP cone domain PN96_04080 PF00521 DNA gyrase/topoisomerase IV, subunit A PN96_04080 PF03989 DNA gyrase C-terminal domain, beta-propeller PN96_04090 PF00925 GTP cyclohydrolase II PN96_04115 PF03734 L,D-transpeptidase catalytic domain PN96_04115 PF01471 Putative peptidoglycan binding domain PN96_04120 PF05951 Bacterial protein of unknown function (DUF882) PN96_04125 PF00753 Metallo-beta-lactamase superfamily PN96_04140 PF03480 Bacterial extracellular solute-binding protein, family 7 PN96_04150 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PN96_04155 PF17200 Single Cache domain 2 PN96_04155 PF07730 Histidine kinase PN96_04160 PF00072 Response regulator receiver domain PN96_04160 PF00196 Bacterial regulatory proteins, luxR family PN96_04165 PF01047 MarR family PN96_04170 PF02028 BCCT, betaine/carnitine/choline family transporter PN96_04175 PF02743 Cache domain PN96_04175 PF00672 HAMP domain PN96_04175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PN96_04180 PF17657 Bacterial DNA polymerase III alpha subunit finger domain PN96_04180 PF02811 PHP domain PN96_04180 PF00929 Exonuclease PN96_04180 PF07733 Bacterial DNA polymerase III alpha NTPase domain PN96_04180 PF14579 Helix-hairpin-helix motif PN96_04195 PF00155 Aminotransferase class I and II PN96_04210 PF00155 Aminotransferase class I and II PN96_04210 PF00392 Bacterial regulatory proteins, gntR family PN96_04220 PF00152 tRNA synthetases class II (D, K and N) PN96_04220 PF01336 OB-fold nucleic acid binding domain PN96_04225 PF01242 6-pyruvoyl tetrahydropterin synthase PN96_04230 PF03315 Serine dehydratase beta chain PN96_04230 PF03313 Serine dehydratase alpha chain PN96_04235 PF03222 Tryptophan/tyrosine permease family PN96_04240 PF00293 NUDIX domain PN96_04245 PF04715 Anthranilate synthase component I, N terminal region PN96_04245 PF00425 chorismate binding enzyme PN96_04260 PF04317 YcjX-like family, DUF463 PN96_04265 PF05128 Domain of unknown function (DUF697) PN96_04270 PF18024 Helix-turn-helix domain PN96_04270 PF00158 Sigma-54 interaction domain PN96_04275 PF13302 Acetyltransferase (GNAT) domain PN96_04290 PF00589 Phage integrase family PN96_04290 PF12167 Arm DNA-binding domain PN96_04320 PF10065 Uncharacterized conserved protein (DUF2303) PN96_04345 PF01381 Helix-turn-helix PN96_04345 PF00717 Peptidase S24-like PN96_04395 PF06147 Protein of unknown function (DUF968) PN96_04440 PF07471 Phage DNA packaging protein Nu1 PN96_04445 PF02413 Caudovirales tail fibre assembly protein, lambda gpK PN96_04525 PF00589 Phage integrase family PN96_04525 PF13495 Phage integrase, N-terminal SAM-like domain PN96_04535 PF13649 Methyltransferase domain PN96_04575 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain PN96_04575 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain PN96_04575 PF02278 Polysaccharide lyase family 8, super-sandwich domain PN96_04590 PF02397 Bacterial sugar transferase PN96_04600 PF00534 Glycosyl transferases group 1 PN96_04600 PF13439 Glycosyltransferase Family 4 PN96_04605 PF13614 AAA domain PN96_04605 PF13807 G-rich domain on putative tyrosine kinase PN96_04605 PF02706 Chain length determinant protein PN96_04645 PF02954 Bacterial regulatory protein, Fis family PN96_04645 PF00072 Response regulator receiver domain PN96_04645 PF00158 Sigma-54 interaction domain PN96_04650 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) PN96_04650 PF01627 Hpt domain PN96_04650 PF00672 HAMP domain PN96_04650 PF00512 His Kinase A (phospho-acceptor) domain PN96_04650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PN96_04650 PF00072 Response regulator receiver domain PN96_04670 PF01389 OmpA-like transmembrane domain PN96_04670 PF00691 OmpA family PN96_04675 PF01740 STAS domain PN96_04690 PF04399 Glutaredoxin 2, C terminal domain PN96_04690 PF13417 Glutathione S-transferase, N-terminal domain PN96_04705 PF00294 pfkB family carbohydrate kinase PN96_04710 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PN96_04710 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PN96_04710 PF00205 Thiamine pyrophosphate enzyme, central domain PN96_04715 PF00465 Iron-containing alcohol dehydrogenase PN96_04715 PF00171 Aldehyde dehydrogenase family PN96_04720 PF00294 pfkB family carbohydrate kinase PN96_04725 PF01261 Xylose isomerase-like TIM barrel PN96_04730 PF00356 Bacterial regulatory proteins, lacI family PN96_04735 PF01261 Xylose isomerase-like TIM barrel PN96_04740 PF00083 Sugar (and other) transporter PN96_04745 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PN96_04745 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PN96_04750 PF04962 KduI/IolB family PN96_04755 PF02142 MGS-like domain PN96_04765 PF00465 Iron-containing alcohol dehydrogenase PN96_04775 PF00171 Aldehyde dehydrogenase family PN96_04790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PN96_04790 PF00672 HAMP domain PN96_04790 PF00512 His Kinase A (phospho-acceptor) domain PN96_04795 PF00072 Response regulator receiver domain PN96_04795 PF00486 Transcriptional regulatory protein, C terminal PN96_04800 PF00728 Glycosyl hydrolase family 20, catalytic domain PN96_04800 PF02838 Glycosyl hydrolase family 20, domain 2 PN96_04800 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain PN96_04800 PF03173 Putative carbohydrate binding domain PN96_04820 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) PN96_04830 PF00440 Bacterial regulatory proteins, tetR family PN96_04830 PF17754 MftR C-terminal domain PN96_04840 PF12833 Helix-turn-helix domain PN96_04840 PF01965 DJ-1/PfpI family PN96_04875 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PN96_04905 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PN96_04905 PF01411 tRNA synthetases class II (A) PN96_04910 PF08274 PhnA Zinc-Ribbon PN96_04910 PF03831 PhnA domain PN96_04925 PF00497 Bacterial extracellular solute-binding proteins, family 3 PN96_04930 PF00528 Binding-protein-dependent transport system inner membrane component PN96_04935 PF00528 Binding-protein-dependent transport system inner membrane component PN96_04940 PF00005 ABC transporter PN96_04945 PF01112 Asparaginase PN96_04955 PF07969 Amidohydrolase family PN96_04970 PF03553 Na+/H+ antiporter family PN96_04975 PF00120 Glutamine synthetase, catalytic domain PN96_04980 PF07722 Peptidase C26 PN96_04985 PF01381 Helix-turn-helix PN96_04985 PF07883 Cupin domain PN96_04990 PF00171 Aldehyde dehydrogenase family PN96_04995 PF01266 FAD dependent oxidoreductase PN96_05000 PF00795 Carbon-nitrogen hydrolase PN96_05005 PF04371 Porphyromonas-type peptidyl-arginine deiminase PN96_05010 PF00171 Aldehyde dehydrogenase family PN96_05015 PF00202 Aminotransferase class-III PN96_05025 PF01047 MarR family PN96_05030 PF04237 YjbR PN96_05055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PN96_05055 PF00512 His Kinase A (phospho-acceptor) domain PN96_05055 PF01627 Hpt domain PN96_05055 PF00072 Response regulator receiver domain PN96_05055 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) PN96_05055 PF00672 HAMP domain PN96_05065 PF04204 Homoserine O-succinyltransferase PN96_05075 PF03279 Bacterial lipid A biosynthesis acyltransferase PN96_05085 PF13533 Biotin-lipoyl like PN96_05095 PF02558 Ketopantoate reductase PanE/ApbA PN96_05095 PF08546 Ketopantoate reductase PanE/ApbA C terminal PN96_05100 PF02074 Carboxypeptidase Taq (M32) metallopeptidase PN96_05105 PF01810 LysE type translocator PN96_05110 PF00296 Luciferase-like monooxygenase PN96_05125 PF01235 Sodium:alanine symporter family PN96_05130 PF00881 Nitroreductase family PN96_05135 PF03466 LysR substrate binding domain PN96_05135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_05140 PF00082 Subtilase family PN96_05140 PF05922 Peptidase inhibitor I9 PN96_05160 PF00884 Sulfatase PN96_05165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PN96_05165 PF08521 Two-component sensor kinase N-terminal PN96_05165 PF00512 His Kinase A (phospho-acceptor) domain PN96_05170 PF00072 Response regulator receiver domain PN96_05170 PF00486 Transcriptional regulatory protein, C terminal PN96_05180 PF00106 short chain dehydrogenase PN96_05190 PF00501 AMP-binding enzyme PN96_05200 PF04069 Substrate binding domain of ABC-type glycine betaine transport system PN96_05205 PF00528 Binding-protein-dependent transport system inner membrane component PN96_05210 PF00005 ABC transporter PN96_05210 PF00571 CBS domain PN96_05215 PF00583 Acetyltransferase (GNAT) family PN96_05220 PF00202 Aminotransferase class-III PN96_05225 PF06339 Ectoine synthase PN96_05230 PF00696 Amino acid kinase family PN96_05230 PF13840 ACT domain PN96_05245 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PN96_05260 PF17203 Single cache domain 3 PN96_05260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PN96_05260 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain PN96_05260 PF00989 PAS fold PN96_05265 PF00072 Response regulator receiver domain PN96_05265 PF12431 Transcriptional regulator PN96_05270 PF00593 TonB dependent receptor PN96_05270 PF07715 TonB-dependent Receptor Plug Domain PN96_05275 PF12833 Helix-turn-helix domain PN96_05280 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain PN96_05280 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain PN96_05285 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase PN96_05290 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain PN96_05290 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PN96_05300 PF02954 Bacterial regulatory protein, Fis family PN96_05300 PF00158 Sigma-54 interaction domain PN96_05300 PF01590 GAF domain PN96_05305 PF00171 Aldehyde dehydrogenase family PN96_05310 PF16868 NMT1-like family PN96_05315 PF01925 Sulfite exporter TauE/SafE PN96_05320 PF01970 Tripartite tricarboxylate transporter TctA family PN96_05350 PF00285 Citrate synthase, C-terminal domain PN96_05355 PF00330 Aconitase family (aconitate hydratase) PN96_05355 PF00694 Aconitase C-terminal domain PN96_05360 PF04303 PrpF protein PN96_05365 PF00501 AMP-binding enzyme PN96_05365 PF16177 Acetyl-coenzyme A synthetase N-terminus PN96_05365 PF13193 AMP-binding enzyme C-terminal domain PN96_05375 PF00293 NUDIX domain PN96_05380 PF00593 TonB dependent receptor PN96_05380 PF07715 TonB-dependent Receptor Plug Domain PN96_05390 PF07687 Peptidase dimerisation domain PN96_05390 PF01546 Peptidase family M20/M25/M40 PN96_05395 PF00563 EAL domain PN96_05395 PF00990 Diguanylate cyclase, GGDEF domain PN96_05395 PF13426 PAS domain PN96_05420 PF12464 Maltose acetyltransferase PN96_05420 PF14602 Hexapeptide repeat of succinyl-transferase PN96_05435 PF04055 Radical SAM superfamily PN96_05440 PF06508 Queuosine biosynthesis protein QueC PN96_05445 PF17158 Membrane-associated sensor, integral membrane domain PN96_05445 PF00990 Diguanylate cyclase, GGDEF domain PN96_05455 PF00691 OmpA family PN96_05475 PF10672 S-adenosylmethionine-dependent methyltransferase PN96_05475 PF17785 PUA-like domain PN96_05480 PF00708 Acylphosphatase PN96_05485 PF04358 DsrC like protein PN96_05495 PF01027 Inhibitor of apoptosis-promoting Bax1 PN96_05500 PF00005 ABC transporter PN96_05505 PF00528 Binding-protein-dependent transport system inner membrane component PN96_05510 PF00528 Binding-protein-dependent transport system inner membrane component PN96_05515 PF00497 Bacterial extracellular solute-binding proteins, family 3 PN96_05525 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PN96_05525 PF10414 Sirohaem synthase dimerisation region PN96_05525 PF14824 Sirohaem biosynthesis protein central PN96_05530 PF04461 Protein of unknown function (DUF520) PN96_05535 PF00793 DAHP synthetase I family PN96_05555 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF PN96_05555 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF PN96_05555 PF01189 16S rRNA methyltransferase RsmB/F PN96_05560 PF02470 MlaD protein PN96_05565 PF04403 Paraquat-inducible protein A PN96_05570 PF00664 ABC transporter transmembrane region PN96_05570 PF00005 ABC transporter PN96_05575 PF13185 GAF domain PN96_05580 PF17516 ProQ C-terminal domain PN96_05580 PF04352 ProQ/FINO family PN96_05585 PF11818 C-terminal domain of tail specific protease (DUF3340) PN96_05585 PF00595 PDZ domain PN96_05585 PF17804 Tail specific protease N-terminal domain PN96_05585 PF03572 Peptidase family S41 PN96_05595 PF01433 Peptidase family M1 domain PN96_05595 PF11940 Domain of unknown function (DUF3458) Ig-like fold PN96_05595 PF17432 Domain of unknown function (DUF3458_C) ARM repeats PN96_05600 PF05088 Bacterial NAD-glutamate dehydrogenase PN96_05605 PF01180 Dihydroorotate dehydrogenase PN96_05610 PF07126 Cell-division protein ZapC PN96_05615 PF01170 Putative RNA methylase family UPF0020 PN96_05615 PF02926 THUMP domain PN96_05615 PF10672 S-adenosylmethionine-dependent methyltransferase PN96_05635 PF04957 Ribosome modulation factor PN96_05640 PF07977 FabA-like domain PN96_05645 PF05362 Lon protease (S16) C-terminal proteolytic domain PN96_05645 PF13654 AAA domain PN96_05650 PF17414 MatP C-terminal ribbon-helix-helix domain PN96_05650 PF06303 MatP N-terminal domain PN96_05685 PF08000 Bacterial PH domain PN96_05705 PF00072 Response regulator receiver domain PN96_05705 PF09308 LuxQ, periplasmic PN96_05705 PF00512 His Kinase A (phospho-acceptor) domain PN96_05705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PN96_05720 PF00115 Cytochrome C and Quinol oxidase polypeptide I PN96_05735 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP PN96_05735 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PN96_05745 PF00403 Heavy-metal-associated domain PN96_05760 PF13545 Crp-like helix-turn-helix domain PN96_05760 PF00027 Cyclic nucleotide-binding domain PN96_05765 PF00582 Universal stress protein family PN96_05770 PF01171 PP-loop family PN96_05785 PF08402 TOBE domain PN96_05785 PF00005 ABC transporter PN96_05790 PF00528 Binding-protein-dependent transport system inner membrane component PN96_05795 PF00528 Binding-protein-dependent transport system inner membrane component PN96_05800 PF13416 Bacterial extracellular solute-binding protein PN96_05805 PF13416 Bacterial extracellular solute-binding protein PN96_05810 PF02146 Sir2 family PN96_05815 PF00909 Ammonium Transporter Family PN96_05820 PF01554 MatE PN96_05825 PF12833 Helix-turn-helix domain PN96_05830 PF00132 Bacterial transferase hexapeptide (six repeats) PN96_05830 PF12464 Maltose acetyltransferase PN96_05845 PF13247 4Fe-4S dicluster domain PN96_05850 PF01568 Molydopterin dinucleotide binding domain PN96_05850 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PN96_05850 PF00384 Molybdopterin oxidoreductase PN96_05880 PF02634 FdhD/NarQ family PN96_05890 PF12848 ABC transporter PN96_05890 PF00005 ABC transporter PN96_05895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PN96_05895 PF00512 His Kinase A (phospho-acceptor) domain PN96_05900 PF00072 Response regulator receiver domain PN96_05900 PF02954 Bacterial regulatory protein, Fis family PN96_05900 PF00158 Sigma-54 interaction domain PN96_05905 PF12849 PBP superfamily domain PN96_05910 PF00528 Binding-protein-dependent transport system inner membrane component PN96_05915 PF00005 ABC transporter PN96_05915 PF08402 TOBE domain PN96_05920 PF12804 MobA-like NTP transferase domain PN96_05925 PF00994 Probable molybdopterin binding domain PN96_05925 PF03453 MoeA N-terminal region (domain I and II) PN96_05925 PF03454 MoeA C-terminal region (domain IV) PN96_05940 PF00480 ROK family PN96_05965 PF12729 Four helix bundle sensory module for signal transduction PN96_05965 PF00672 HAMP domain PN96_05965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PN96_05970 PF00877 NlpC/P60 family PN96_05980 PF00990 Diguanylate cyclase, GGDEF domain PN96_05980 PF05230 MASE2 domain PN96_05985 PF00072 Response regulator receiver domain PN96_05985 PF00486 Transcriptional regulatory protein, C terminal PN96_06000 PF00677 Lumazine binding domain PN96_06005 PF01554 MatE PN96_06015 PF14743 DNA ligase OB-like domain PN96_06015 PF01068 ATP dependent DNA ligase domain PN96_06025 PF02028 BCCT, betaine/carnitine/choline family transporter PN96_06040 PF04408 Helicase associated domain (HA2) PN96_06040 PF11898 Domain of unknown function (DUF3418) PN96_06040 PF00270 DEAD/DEAH box helicase PN96_06040 PF00271 Helicase conserved C-terminal domain PN96_06040 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold PN96_06045 PF02525 Flavodoxin-like fold PN96_06080 PF00012 Hsp70 protein PN96_06085 PF00012 Hsp70 protein PN96_06100 PF00005 ABC transporter PN96_06100 PF00664 ABC transporter transmembrane region PN96_06105 PF00664 ABC transporter transmembrane region PN96_06105 PF00005 ABC transporter PN96_06120 PF00072 Response regulator receiver domain PN96_06120 PF01966 HD domain PN96_06125 PF03222 Tryptophan/tyrosine permease family PN96_06145 PF00497 Bacterial extracellular solute-binding proteins, family 3 PN96_06145 PF00512 His Kinase A (phospho-acceptor) domain PN96_06145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PN96_06150 PF00939 Sodium:sulfate symporter transmembrane region PN96_06160 PF02492 CobW/HypB/UreG, nucleotide-binding domain PN96_06165 PF01730 UreF PN96_06170 PF02814 UreE urease accessory protein, N-terminal domain PN96_06170 PF05194 UreE urease accessory protein, C-terminal domain PN96_06175 PF00449 Urease alpha-subunit, N-terminal domain PN96_06175 PF01979 Amidohydrolase family PN96_06180 PF00699 Urease beta subunit PN96_06185 PF00547 Urease, gamma subunit PN96_06190 PF01774 UreD urease accessory protein PN96_06195 PF00005 ABC transporter PN96_06200 PF12399 Branched-chain amino acid ATP-binding cassette transporter PN96_06200 PF00005 ABC transporter PN96_06210 PF02653 Branched-chain amino acid transport system / permease component PN96_06220 PF00072 Response regulator receiver domain PN96_06220 PF18415 Histidine kinase receptor ArcB trans-membrane domain PN96_06220 PF00512 His Kinase A (phospho-acceptor) domain PN96_06220 PF00989 PAS fold PN96_06220 PF01627 Hpt domain PN96_06220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PN96_06225 PF00486 Transcriptional regulatory protein, C terminal PN96_06225 PF00072 Response regulator receiver domain PN96_06230 PF02230 Phospholipase/Carboxylesterase PN96_06240 PF09339 IclR helix-turn-helix domain PN96_06240 PF01614 Bacterial transcriptional regulator PN96_06245 PF00083 Sugar (and other) transporter PN96_06250 PF07836 DmpG-like communication domain PN96_06250 PF00682 HMGL-like PN96_06255 PF01118 Semialdehyde dehydrogenase, NAD binding domain PN96_06255 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation PN96_06260 PF01557 Fumarylacetoacetate (FAA) hydrolase family PN96_06265 PF12697 Alpha/beta hydrolase family PN96_06270 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase PN96_06275 PF01494 FAD binding domain PN96_06280 PF02417 Chromate transporter PN96_06285 PF02417 Chromate transporter PN96_06295 PF07687 Peptidase dimerisation domain PN96_06295 PF01546 Peptidase family M20/M25/M40 PN96_06300 PF00266 Aminotransferase class-V PN96_06310 PF01425 Amidase PN96_06315 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin PN96_06325 PF01177 Asp/Glu/Hydantoin racemase PN96_06430 PF00004 ATPase family associated with various cellular activities (AAA) PN96_06430 PF01434 Peptidase family M41 PN96_06430 PF17862 AAA+ lid domain PN96_06435 PF03466 LysR substrate binding domain PN96_06435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_06440 PF00848 Ring hydroxylating alpha subunit (catalytic domain) PN96_06440 PF00355 Rieske [2Fe-2S] domain PN96_06445 PF00866 Ring hydroxylating beta subunit PN96_06450 PF00355 Rieske [2Fe-2S] domain PN96_06455 PF00106 short chain dehydrogenase PN96_06460 PF14759 Reductase C-terminal PN96_06460 PF07992 Pyridine nucleotide-disulphide oxidoreductase PN96_06470 PF06039 Malate:quinone oxidoreductase (Mqo) PN96_06480 PF13181 Tetratricopeptide repeat PN96_06480 PF07719 Tetratricopeptide repeat PN96_06490 PF00455 DeoR C terminal sensor domain PN96_06490 PF08220 DeoR-like helix-turn-helix domain PN96_06495 PF07969 Amidohydrolase family PN96_06500 PF05036 Sporulation related domain PN96_06500 PF03330 Lytic transglycolase PN96_06505 PF01810 LysE type translocator PN96_06510 PF12833 Helix-turn-helix domain PN96_06520 PF06196 Protein of unknown function (DUF997) PN96_06525 PF00474 Sodium:solute symporter family PN96_06530 PF02264 LamB porin PN96_06535 PF00232 Glycosyl hydrolase family 1 PN96_06540 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 PN96_06540 PF02378 Phosphotransferase system, EIIC PN96_06540 PF00367 phosphotransferase system, EIIB PN96_06545 PF00356 Bacterial regulatory proteins, lacI family PN96_06555 PF12833 Helix-turn-helix domain PN96_06555 PF02311 AraC-like ligand binding domain PN96_06565 PF02653 Branched-chain amino acid transport system / permease component PN96_06570 PF02653 Branched-chain amino acid transport system / permease component PN96_06575 PF00005 ABC transporter PN96_06595 PF12833 Helix-turn-helix domain PN96_06595 PF14525 AraC-binding-like domain PN96_06600 PF12833 Helix-turn-helix domain PN96_06625 PF07690 Major Facilitator Superfamily PN96_06630 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PN96_06630 PF00034 Cytochrome c PN96_06635 PF05199 GMC oxidoreductase PN96_06635 PF00732 GMC oxidoreductase PN96_06640 PF13618 Gluconate 2-dehydrogenase subunit 3 PN96_06665 PF02798 Glutathione S-transferase, N-terminal domain PN96_06665 PF14497 Glutathione S-transferase, C-terminal domain PN96_06675 PF04209 homogentisate 1,2-dioxygenase PN96_06680 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PN96_06685 PF07687 Peptidase dimerisation domain PN96_06685 PF01546 Peptidase family M20/M25/M40 PN96_06700 PF01032 FecCD transport family PN96_06705 PF00005 ABC transporter PN96_06760 PF05971 RNA methyltransferase PN96_06765 PF01863 Protein of unknown function DUF45 PN96_06775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_06775 PF03466 LysR substrate binding domain PN96_06795 PF00005 ABC transporter PN96_06800 PF01032 FecCD transport family PN96_06805 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family PN96_06820 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase PN96_06825 PF02654 Cobalamin-5-phosphate synthase PN96_06830 PF02277 Phosphoribosyltransferase PN96_06835 PF01613 Flavin reductase like domain PN96_06840 PF13460 NAD(P)H-binding PN96_06860 PF08003 Protein of unknown function (DUF1698) PN96_07020 PF01695 IstB-like ATP binding protein PN96_07035 PF00717 Peptidase S24-like PN96_07035 PF01381 Helix-turn-helix PN96_07090 PF00929 Exonuclease PN96_07090 PF08411 Exonuclease C-terminal PN96_07095 PF03788 LrgA family PN96_07100 PF04172 LrgB-like family PN96_07105 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PN96_07105 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region PN96_07110 PF02222 ATP-grasp domain PN96_07115 PF05724 Thiopurine S-methyltransferase (TPMT) PN96_07125 PF00216 Bacterial DNA-binding protein PN96_07135 PF13407 Periplasmic binding protein domain PN96_07135 PF00356 Bacterial regulatory proteins, lacI family PN96_07145 PF00294 pfkB family carbohydrate kinase PN96_07150 PF00251 Glycosyl hydrolases family 32 N-terminal domain PN96_07150 PF08244 Glycosyl hydrolases family 32 C terminal PN96_07155 PF03147 Ferredoxin-fold anticodon binding domain PN96_07155 PF03483 B3/4 domain PN96_07155 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain PN96_07155 PF01588 Putative tRNA binding domain PN96_07155 PF03484 tRNA synthetase B5 domain PN96_07160 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain PN96_07160 PF01409 tRNA synthetases class II core domain (F) PN96_07170 PF00453 Ribosomal protein L20 PN96_07175 PF01632 Ribosomal protein L35 PN96_07180 PF00707 Translation initiation factor IF-3, C-terminal domain PN96_07180 PF05198 Translation initiation factor IF-3, N-terminal domain PN96_07185 PF03129 Anticodon binding domain PN96_07185 PF02824 TGS domain PN96_07185 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PN96_07185 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PN96_07200 PF07702 UTRA domain PN96_07200 PF00392 Bacterial regulatory proteins, gntR family PN96_07205 PF01979 Amidohydrolase family PN96_07210 PF00491 Arginase family PN96_07220 PF13409 Glutathione S-transferase, N-terminal domain PN96_07225 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase PN96_07230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_07230 PF03466 LysR substrate binding domain PN96_07240 PF02913 FAD linked oxidases, C-terminal domain PN96_07240 PF01565 FAD binding domain PN96_07240 PF13183 4Fe-4S dicluster domain PN96_07255 PF00691 OmpA family PN96_07275 PF01259 SAICAR synthetase PN96_07280 PF09423 PhoD-like phosphatase PN96_07280 PF16655 PhoD-like phosphatase, N-terminal domain PN96_07290 PF00270 DEAD/DEAH box helicase PN96_07290 PF11898 Domain of unknown function (DUF3418) PN96_07290 PF04408 Helicase associated domain (HA2) PN96_07290 PF00271 Helicase conserved C-terminal domain PN96_07290 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold PN96_07295 PF03949 Malic enzyme, NAD binding domain PN96_07295 PF00390 Malic enzyme, N-terminal domain PN96_07300 PF02698 DUF218 domain PN96_07305 PF00939 Sodium:sulfate symporter transmembrane region PN96_07315 PF00266 Aminotransferase class-V PN96_07325 PF07992 Pyridine nucleotide-disulphide oxidoreductase PN96_07330 PF00005 ABC transporter PN96_07330 PF00664 ABC transporter transmembrane region PN96_07335 PF00664 ABC transporter transmembrane region PN96_07335 PF00005 ABC transporter PN96_07340 PF00291 Pyridoxal-phosphate dependent enzyme PN96_07345 PF00266 Aminotransferase class-V PN96_07355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PN96_07355 PF00512 His Kinase A (phospho-acceptor) domain PN96_07355 PF00497 Bacterial extracellular solute-binding proteins, family 3 PN96_07370 PF04994 TfoX C-terminal domain PN96_07370 PF04993 TfoX N-terminal domain PN96_07380 PF03956 Lysine exporter LysO PN96_07390 PF00282 Pyridoxal-dependent decarboxylase conserved domain PN96_07395 PF01418 Helix-turn-helix domain, rpiR family PN96_07395 PF01380 SIS domain PN96_07400 PF00171 Aldehyde dehydrogenase family PN96_07400 PF00465 Iron-containing alcohol dehydrogenase PN96_07405 PF00462 Glutaredoxin PN96_07410 PF02080 TrkA-C domain PN96_07410 PF06826 Predicted Permease Membrane Region PN96_07415 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase PN96_07415 PF07055 Enoyl reductase FAD binding domain PN96_07415 PF12241 Trans-2-enoyl-CoA reductase catalytic region PN96_07420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PN96_07420 PF02770 Acyl-CoA dehydrogenase, middle domain PN96_07420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PN96_07420 PF09317 Domain of unknown function (DUF1974) PN96_07425 PF16295 Tetracyclin repressor-like, C-terminal domain PN96_07425 PF00440 Bacterial regulatory proteins, tetR family PN96_07430 PF06965 Na+/H+ antiporter 1 PN96_07445 PF00005 ABC transporter PN96_07450 PF01554 MatE PN96_07455 PF11066 Protein of unknown function (DUF2867) PN96_07455 PF13460 NAD(P)H-binding PN96_07460 PF03264 NapC/NirT cytochrome c family, N-terminal region PN96_07475 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) PN96_07480 PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB PN96_07490 PF07690 Major Facilitator Superfamily PN96_07495 PF01479 S4 domain PN96_07495 PF00849 RNA pseudouridylate synthase PN96_07500 PF04851 Type III restriction enzyme, res subunit PN96_07500 PF00271 Helicase conserved C-terminal domain PN96_07510 PF00486 Transcriptional regulatory protein, C terminal PN96_07510 PF00072 Response regulator receiver domain PN96_07515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PN96_07515 PF13755 Sensor N-terminal transmembrane domain PN96_07515 PF13756 Stimulus-sensing domain PN96_07515 PF00672 HAMP domain PN96_07515 PF00512 His Kinase A (phospho-acceptor) domain PN96_07520 PF01386 Ribosomal L25p family PN96_07525 PF00149 Calcineurin-like phosphoesterase PN96_07525 PF02872 5'-nucleotidase, C-terminal domain PN96_07535 PF06945 Protein of unknown function (DUF1289) PN96_07545 PF13416 Bacterial extracellular solute-binding protein PN96_07550 PF00528 Binding-protein-dependent transport system inner membrane component PN96_07555 PF00005 ABC transporter PN96_07560 PF01066 CDP-alcohol phosphatidyltransferase PN96_07570 PF01590 GAF domain PN96_07570 PF00158 Sigma-54 interaction domain PN96_07575 PF03063 Prismane/CO dehydrogenase family PN96_07580 PF00970 Oxidoreductase FAD-binding domain PN96_07580 PF00111 2Fe-2S iron-sulfur cluster binding domain PN96_07580 PF00175 Oxidoreductase NAD-binding domain PN96_07590 PF00849 RNA pseudouridylate synthase PN96_07595 PF00209 Sodium:neurotransmitter symporter family PN96_07600 PF13091 PLD-like domain PN96_07600 PF13396 Phospholipase_D-nuclease N-terminal PN96_07605 PF01053 Cys/Met metabolism PLP-dependent enzyme PN96_07610 PF03352 Methyladenine glycosylase PN96_07615 PF00873 AcrB/AcrD/AcrF family PN96_07620 PF13533 Biotin-lipoyl like PN96_07625 PF13533 Biotin-lipoyl like PN96_07630 PF04024 PspC domain PN96_07635 PF06667 Phage shock protein B PN96_07640 PF04012 PspA/IM30 family PN96_07645 PF00158 Sigma-54 interaction domain PN96_07645 PF02954 Bacterial regulatory protein, Fis family PN96_07650 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PN96_07655 PF00528 Binding-protein-dependent transport system inner membrane component PN96_07660 PF12911 N-terminal TM domain of oligopeptide transport permease C PN96_07660 PF00528 Binding-protein-dependent transport system inner membrane component PN96_07665 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PN96_07665 PF00005 ABC transporter PN96_07670 PF00005 ABC transporter PN96_07680 PF01368 DHH family PN96_07680 PF02833 DHHA2 domain PN96_07690 PF16874 Glycosyl hydrolase family 36 C-terminal domain PN96_07690 PF16875 Glycosyl hydrolase family 36 N-terminal domain PN96_07695 PF00384 Molybdopterin oxidoreductase PN96_07695 PF18364 Molybdopterin oxidoreductase N-terminal domain PN96_07695 PF01568 Molydopterin dinucleotide binding domain PN96_07700 PF03264 NapC/NirT cytochrome c family, N-terminal region PN96_07705 PF06796 Periplasmic nitrate reductase protein NapE PN96_07710 PF03649 Uncharacterised protein family (UPF0014) PN96_07715 PF01226 Formate/nitrite transporter PN96_07730 PF02698 DUF218 domain PN96_07735 PF00265 Thymidine kinase PN96_07740 PF09190 DALR domain PN96_07740 PF01406 tRNA synthetases class I (C) catalytic domain PN96_07745 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PN96_07750 PF00149 Calcineurin-like phosphoesterase PN96_07755 PF00563 EAL domain PN96_07755 PF08668 HDOD domain PN96_07760 PF02810 SEC-C motif PN96_07765 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase PN96_07765 PF01502 Phosphoribosyl-AMP cyclohydrolase PN96_07770 PF00977 Histidine biosynthesis protein PN96_07775 PF00977 Histidine biosynthesis protein PN96_07780 PF00117 Glutamine amidotransferase class-I PN96_07785 PF08645 Polynucleotide kinase 3 phosphatase PN96_07785 PF00475 Imidazoleglycerol-phosphate dehydratase PN96_07790 PF00155 Aminotransferase class I and II PN96_07795 PF00815 Histidinol dehydrogenase PN96_07800 PF01634 ATP phosphoribosyltransferase PN96_07800 PF08029 HisG, C-terminal domain PN96_07805 PF00158 Sigma-54 interaction domain PN96_07805 PF00072 Response regulator receiver domain PN96_07805 PF02954 Bacterial regulatory protein, Fis family PN96_07815 PF03553 Na+/H+ antiporter family PN96_07820 PF00816 H-NS histone family PN96_07825 PF00294 pfkB family carbohydrate kinase PN96_07840 PF04356 Protein of unknown function (DUF489) PN96_07845 PF08328 Adenylosuccinate lyase C-terminal PN96_07845 PF00206 Lyase PN96_07880 PF00106 short chain dehydrogenase PN96_07890 PF01435 Peptidase family M48 PN96_07900 PF08241 Methyltransferase domain PN96_07905 PF00155 Aminotransferase class I and II PN96_07910 PF04055 Radical SAM superfamily PN96_07910 PF06968 Biotin and Thiamin Synthesis associated domain PN96_07915 PF00202 Aminotransferase class-III PN96_07920 PF02403 Seryl-tRNA synthetase N-terminal domain PN96_07920 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PN96_07925 PF12002 MgsA AAA+ ATPase C terminal PN96_07925 PF16193 AAA C-terminal domain PN96_07925 PF00004 ATPase family associated with various cellular activities (AAA) PN96_07930 PF03548 Outer membrane lipoprotein carrier protein LolA PN96_07935 PF01580 FtsK/SpoIIIE family PN96_07935 PF13491 4TM region of DNA translocase FtsK/SpoIIIE PN96_07935 PF17854 FtsK alpha domain PN96_07935 PF09397 Ftsk gamma domain PN96_07940 PF01037 Lrp/AsnC ligand binding domain PN96_07945 PF05222 Alanine dehydrogenase/PNT, N-terminal domain PN96_07945 PF01262 Alanine dehydrogenase/PNT, C-terminal domain PN96_07955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_07955 PF03466 LysR substrate binding domain PN96_07965 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) PN96_07980 PF00873 AcrB/AcrD/AcrF family PN96_07985 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PN96_07985 PF00529 HlyD membrane-fusion protein of T1SS PN96_07990 PF03594 Benzoate membrane transport protein PN96_07995 PF07883 Cupin domain PN96_07995 PF01381 Helix-turn-helix PN96_08000 PF00698 Acyl transferase domain PN96_08005 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG PN96_08020 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase PN96_08025 PF16957 Malonate decarboxylase, alpha subunit, transporter PN96_08030 PF03466 LysR substrate binding domain PN96_08030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_08035 PF00082 Subtilase family PN96_08040 PF13391 HNH endonuclease PN96_08055 PF06610 L-alanine exporter PN96_08060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PN96_08060 PF00512 His Kinase A (phospho-acceptor) domain PN96_08060 PF00072 Response regulator receiver domain PN96_08060 PF09308 LuxQ, periplasmic PN96_08080 PF03150 Di-haem cytochrome c peroxidase PN96_08095 PF03738 Glutathionylspermidine synthase preATP-grasp PN96_08105 PF03994 Domain of Unknown Function (DUF350) PN96_08115 PF02445 Quinolinate synthetase A protein PN96_08120 PF16331 TolA binding protein trimerisation PN96_08120 PF13174 Tetratricopeptide repeat PN96_08125 PF00691 OmpA family PN96_08130 PF04052 TolB amino-terminal domain PN96_08130 PF07676 WD40-like Beta Propeller Repeat PN96_08140 PF02472 Biopolymer transport protein ExbD/TolR PN96_08145 PF01618 MotA/TolQ/ExbB proton channel family PN96_08150 PF03061 Thioesterase superfamily PN96_08160 PF08173 Membrane bound YbgT-like protein PN96_08165 PF02322 Cytochrome bd terminal oxidase subunit II PN96_08170 PF01654 Cytochrome bd terminal oxidase subunit I PN96_08175 PF05496 Holliday junction DNA helicase RuvB P-loop domain PN96_08175 PF05491 RuvB C-terminal winged helix domain PN96_08175 PF17864 RuvB AAA lid domain PN96_08180 PF01330 RuvA N terminal domain PN96_08180 PF07499 RuvA, C-terminal domain PN96_08185 PF02075 Crossover junction endodeoxyribonuclease RuvC PN96_08190 PF02938 GAD domain PN96_08190 PF01336 OB-fold nucleic acid binding domain PN96_08190 PF00152 tRNA synthetases class II (D, K and N) PN96_08195 PF01904 Protein of unknown function DUF72 PN96_08200 PF13649 Methyltransferase domain PN96_08205 PF08003 Protein of unknown function (DUF1698) PN96_08210 PF18030 RimK PreATP-grasp domain PN96_08210 PF08443 RimK-like ATP-grasp domain PN96_08220 PF08443 RimK-like ATP-grasp domain PN96_08220 PF18030 RimK PreATP-grasp domain PN96_08225 PF05199 GMC oxidoreductase PN96_08225 PF00732 GMC oxidoreductase PN96_08230 PF00171 Aldehyde dehydrogenase family PN96_08235 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term PN96_08235 PF12833 Helix-turn-helix domain PN96_08240 PF16330 MukB hinge domain PN96_08240 PF04310 MukB N-terminal PN96_08245 PF04288 MukE-like family PN96_08250 PF03882 MukF winged-helix domain PN96_08250 PF17193 MukF C-terminal domain PN96_08250 PF17192 MukF middle domain PN96_08260 PF02698 DUF218 domain PN96_08265 PF00486 Transcriptional regulatory protein, C terminal PN96_08265 PF00072 Response regulator receiver domain PN96_08270 PF02613 Nitrate reductase delta subunit PN96_08275 PF00356 Bacterial regulatory proteins, lacI family PN96_08280 PF04993 TfoX N-terminal domain PN96_08280 PF04994 TfoX C-terminal domain PN96_08300 PF08323 Starch synthase catalytic domain PN96_08300 PF00534 Glycosyl transferases group 1 PN96_08305 PF00483 Nucleotidyl transferase PN96_08310 PF01131 DNA topoisomerase PN96_08310 PF01396 Topoisomerase DNA binding C4 zinc finger PN96_08310 PF01751 Toprim domain PN96_08310 PF08272 Topoisomerase I zinc-ribbon-like PN96_08315 PF10692 Protein of unknown function (DUF2498) PN96_08320 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PN96_08330 PF03588 Leucyl/phenylalanyl-tRNA protein transferase PN96_08335 PF04376 Arginine-tRNA-protein transferase, N terminus PN96_08335 PF04377 Arginine-tRNA-protein transferase, C terminus PN96_08340 PF01176 Translation initiation factor 1A / IF-1 PN96_08345 PF02861 Clp amino terminal domain, pathogenicity island component PN96_08345 PF10431 C-terminal, D2-small domain, of ClpB protein PN96_08345 PF07724 AAA domain (Cdc48 subfamily) PN96_08345 PF00004 ATPase family associated with various cellular activities (AAA) PN96_08345 PF17871 AAA lid domain PN96_08350 PF02617 ATP-dependent Clp protease adaptor protein ClpS PN96_08355 PF00313 'Cold-shock' DNA-binding domain PN96_08360 PF03971 Monomeric isocitrate dehydrogenase PN96_08365 PF00849 RNA pseudouridylate synthase PN96_08370 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) PN96_08380 PF13307 Helicase C-terminal domain PN96_08380 PF06733 DEAD_2 PN96_08385 PF01925 Sulfite exporter TauE/SafE PN96_08390 PF07445 Primosomal replication protein priC PN96_08395 PF10689 Protein of unknown function (DUF2496) PN96_08400 PF04172 LrgB-like family PN96_08405 PF03788 LrgA family PN96_08410 PF03466 LysR substrate binding domain PN96_08410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_08420 PF03372 Endonuclease/Exonuclease/phosphatase family PN96_08425 PF00528 Binding-protein-dependent transport system inner membrane component PN96_08430 PF00528 Binding-protein-dependent transport system inner membrane component PN96_08435 PF00497 Bacterial extracellular solute-binding proteins, family 3 PN96_08440 PF00005 ABC transporter PN96_08455 PF01228 Glycine radical PN96_08455 PF02901 Pyruvate formate lyase-like PN96_08465 PF04055 Radical SAM superfamily PN96_08475 PF03887 YfbU domain PN96_08480 PF06798 PrkA serine protein kinase C-terminal domain PN96_08480 PF08298 PrkA AAA domain PN96_08485 PF04285 Protein of unknown function (DUF444) PN96_08490 PF04293 SpoVR like protein PN96_08495 PF02348 Cytidylyltransferase PN96_08500 PF03966 Trm112p-like protein PN96_08505 PF02606 Tetraacyldisaccharide-1-P 4'-kinase PN96_08510 PF00005 ABC transporter PN96_08510 PF00664 ABC transporter transmembrane region PN96_08515 PF13567 Domain of unknown function (DUF4131) PN96_08515 PF03772 Competence protein PN96_08515 PF00753 Metallo-beta-lactamase superfamily PN96_08525 PF02687 FtsX-like permease family PN96_08525 PF12704 MacB-like periplasmic core domain PN96_08530 PF00005 ABC transporter PN96_08535 PF12704 MacB-like periplasmic core domain PN96_08535 PF02687 FtsX-like permease family PN96_08545 PF00271 Helicase conserved C-terminal domain PN96_08545 PF03461 TRCF domain PN96_08545 PF00270 DEAD/DEAH box helicase PN96_08545 PF17757 UvrB interaction domain PN96_08545 PF02559 CarD-like/TRCF domain PN96_08560 PF07992 Pyridine nucleotide-disulphide oxidoreductase PN96_08565 PF05728 Uncharacterised protein family (UPF0227) PN96_08575 PF08139 Prokaryotic membrane lipoprotein lipid attachment site PN96_08575 PF13036 Peptidoglycan-synthase activator LpoB PN96_08590 PF01230 HIT domain PN96_08595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PN96_08595 PF00672 HAMP domain PN96_08605 PF01048 Phosphorylase superfamily PN96_08610 PF00403 Heavy-metal-associated domain PN96_08615 PF00571 CBS domain PN96_08615 PF00478 IMP dehydrogenase / GMP reductase domain PN96_08625 PF11953 Domain of unknown function (DUF3470) PN96_08625 PF00037 4Fe-4S binding domain PN96_08630 PF00588 SpoU rRNA Methylase family PN96_08630 PF08032 RNA 2'-O ribose methyltransferase substrate binding PN96_08635 PF00117 Glutamine amidotransferase class-I PN96_08635 PF00958 GMP synthase C terminal domain PN96_08640 PF00171 Aldehyde dehydrogenase family PN96_08650 PF00528 Binding-protein-dependent transport system inner membrane component PN96_08655 PF00528 Binding-protein-dependent transport system inner membrane component PN96_08660 PF00005 ABC transporter PN96_08660 PF08402 TOBE domain PN96_08665 PF13416 Bacterial extracellular solute-binding protein PN96_08670 PF00202 Aminotransferase class-III PN96_08675 PF00120 Glutamine synthetase, catalytic domain PN96_08680 PF00120 Glutamine synthetase, catalytic domain PN96_08685 PF01266 FAD dependent oxidoreductase PN96_08690 PF00232 Glycosyl hydrolase family 1 PN96_08695 PF03466 LysR substrate binding domain PN96_08695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_08730 PF07693 KAP family P-loop domain PN96_08800 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain PN96_08805 PF09619 Type III secretion system lipoprotein chaperone (YscW) PN96_08815 PF01037 Lrp/AsnC ligand binding domain PN96_08815 PF13404 AsnC-type helix-turn-helix domain PN96_08820 PF00291 Pyridoxal-phosphate dependent enzyme PN96_08830 PF00873 AcrB/AcrD/AcrF family PN96_08835 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PN96_08835 PF00529 HlyD membrane-fusion protein of T1SS PN96_08875 PF07690 Major Facilitator Superfamily PN96_08880 PF03601 Conserved hypothetical protein 698 PN96_08890 PF13193 AMP-binding enzyme C-terminal domain PN96_08890 PF00501 AMP-binding enzyme PN96_08895 PF13378 Enolase C-terminal domain-like PN96_08900 PF00378 Enoyl-CoA hydratase/isomerase PN96_08905 PF12697 Alpha/beta hydrolase family PN96_08910 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PN96_08910 PF16582 Middle domain of thiamine pyrophosphate PN96_08910 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PN96_08915 PF00425 chorismate binding enzyme PN96_08920 PF00155 Aminotransferase class I and II PN96_08930 PF01966 HD domain PN96_08930 PF13286 Phosphohydrolase-associated domain PN96_08950 PF13145 PPIC-type PPIASE domain PN96_08955 PF00216 Bacterial DNA-binding protein PN96_08960 PF02190 ATP-dependent protease La (LON) substrate-binding domain PN96_08960 PF05362 Lon protease (S16) C-terminal proteolytic domain PN96_08960 PF00004 ATPase family associated with various cellular activities (AAA) PN96_08965 PF07724 AAA domain (Cdc48 subfamily) PN96_08965 PF10431 C-terminal, D2-small domain, of ClpB protein PN96_08965 PF06689 ClpX C4-type zinc finger PN96_08970 PF00574 Clp protease PN96_08975 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PN96_08975 PF05698 Bacterial trigger factor protein (TF) C-terminus PN96_08975 PF05697 Bacterial trigger factor protein (TF) PN96_08985 PF02743 Cache domain PN96_08985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PN96_08985 PF00512 His Kinase A (phospho-acceptor) domain PN96_08990 PF00072 Response regulator receiver domain PN96_08990 PF02954 Bacterial regulatory protein, Fis family PN96_08990 PF00158 Sigma-54 interaction domain PN96_09000 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PN96_09005 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component PN96_09010 PF03480 Bacterial extracellular solute-binding protein, family 7 PN96_09015 PF00005 ABC transporter PN96_09015 PF03459 TOBE domain PN96_09015 PF17912 MalK OB fold domain PN96_09020 PF00528 Binding-protein-dependent transport system inner membrane component PN96_09030 PF01547 Bacterial extracellular solute-binding protein PN96_09035 PF00512 His Kinase A (phospho-acceptor) domain PN96_09035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PN96_09035 PF00672 HAMP domain PN96_09040 PF00486 Transcriptional regulatory protein, C terminal PN96_09040 PF00072 Response regulator receiver domain PN96_09045 PF02696 Uncharacterized ACR, YdiU/UPF0061 family PN96_09055 PF02386 Cation transport protein PN96_09060 PF02254 TrkA-N domain PN96_09060 PF02080 TrkA-C domain PN96_09065 PF00271 Helicase conserved C-terminal domain PN96_09065 PF00270 DEAD/DEAH box helicase PN96_09070 PF03471 Transporter associated domain PN96_09070 PF01595 Cyclin M transmembrane N-terminal domain PN96_09070 PF00571 CBS domain PN96_09075 PF00593 TonB dependent receptor PN96_09075 PF07715 TonB-dependent Receptor Plug Domain PN96_09090 PF00975 Thioesterase domain PN96_09090 PF00975 Thioesterase domain PN96_09090 PF00501 AMP-binding enzyme PN96_09090 PF13193 AMP-binding enzyme C-terminal domain PN96_09090 PF00550 Phosphopantetheine attachment site PN96_09090 PF00550 Phosphopantetheine attachment site PN96_09090 PF00668 Condensation domain PN96_09090 PF00668 Condensation domain PN96_09090 PF00501 AMP-binding enzyme PN96_09090 PF13193 AMP-binding enzyme C-terminal domain PN96_09095 PF00857 Isochorismatase family PN96_09095 PF00550 Phosphopantetheine attachment site PN96_09100 PF00501 AMP-binding enzyme PN96_09100 PF13193 AMP-binding enzyme C-terminal domain PN96_09105 PF00425 chorismate binding enzyme PN96_09125 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain PN96_09125 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain PN96_09130 PF01773 Na+ dependent nucleoside transporter N-terminus PN96_09130 PF07662 Na+ dependent nucleoside transporter C-terminus PN96_09130 PF07670 Nucleoside recognition PN96_09135 PF03466 LysR substrate binding domain PN96_09135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_09140 PF13406 Transglycosylase SLT domain PN96_09145 PF05166 YcgL domain PN96_09150 PF05209 Septum formation inhibitor MinC, N-terminal domain PN96_09150 PF03775 Septum formation inhibitor MinC, C-terminal domain PN96_09155 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain PN96_09160 PF03776 Septum formation topological specificity factor MinE PN96_09165 PF01612 3'-5' exonuclease PN96_09165 PF00570 HRDC domain PN96_09170 PF13193 AMP-binding enzyme C-terminal domain PN96_09170 PF00501 AMP-binding enzyme PN96_09175 PF00561 alpha/beta hydrolase fold PN96_09190 PF00814 Glycoprotease family PN96_09195 PF13307 Helicase C-terminal domain PN96_09195 PF04851 Type III restriction enzyme, res subunit PN96_09200 PF01842 ACT domain PN96_09200 PF00551 Formyl transferase PN96_09205 PF00089 Trypsin PN96_09215 PF06185 YecM protein PN96_09220 PF03485 Arginyl tRNA synthetase N terminal domain PN96_09220 PF05746 DALR anticodon binding domain PN96_09220 PF00750 tRNA synthetases class I (R) PN96_09235 PF07664 Ferrous iron transport protein B C terminus PN96_09235 PF17910 FeoB cytosolic helical domain PN96_09235 PF02421 Ferrous iron transport protein B PN96_09235 PF07670 Nucleoside recognition PN96_09240 PF04023 FeoA domain PN96_09245 PF12833 Helix-turn-helix domain PN96_09245 PF02311 AraC-like ligand binding domain PN96_09250 PF01297 Zinc-uptake complex component A periplasmic PN96_09255 PF00005 ABC transporter PN96_09260 PF00950 ABC 3 transport family PN96_09265 PF02629 CoA binding domain PN96_09265 PF00549 CoA-ligase PN96_09270 PF08442 ATP-grasp domain PN96_09270 PF00549 CoA-ligase PN96_09275 PF02817 e3 binding domain PN96_09275 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PN96_09275 PF00364 Biotin-requiring enzyme PN96_09280 PF16870 2-oxoglutarate dehydrogenase C-terminal PN96_09280 PF16078 2-oxoglutarate dehydrogenase N-terminus PN96_09280 PF00676 Dehydrogenase E1 component PN96_09280 PF02779 Transketolase, pyrimidine binding domain PN96_09285 PF13085 2Fe-2S iron-sulfur cluster binding domain PN96_09290 PF00890 FAD binding domain PN96_09290 PF02910 Fumarate reductase flavoprotein C-term PN96_09295 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit PN96_09300 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit PN96_09305 PF00285 Citrate synthase, C-terminal domain PN96_09310 PF01784 NIF3 (NGG1p interacting factor 3) PN96_09320 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PN96_09320 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PN96_09320 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PN96_09320 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PN96_09330 PF12697 Alpha/beta hydrolase family PN96_09340 PF00258 Flavodoxin PN96_09345 PF02774 Semialdehyde dehydrogenase, dimerisation domain PN96_09345 PF01118 Semialdehyde dehydrogenase, NAD binding domain PN96_09350 PF01475 Ferric uptake regulator family PN96_09355 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain PN96_09355 PF00749 tRNA synthetases class I (E and Q), catalytic domain PN96_09360 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 PN96_09360 PF02378 Phosphotransferase system, EIIC PN96_09360 PF00367 phosphotransferase system, EIIB PN96_09365 PF01979 Amidohydrolase family PN96_09370 PF01047 MarR family PN96_09370 PF00480 ROK family PN96_09375 PF02254 TrkA-N domain PN96_09375 PF00999 Sodium/hydrogen exchanger family PN96_09380 PF13537 Glutamine amidotransferase domain PN96_09380 PF00733 Asparagine synthase PN96_09385 PF02357 Transcription termination factor nusG PN96_09390 PF00854 POT family PN96_09395 PF00762 Ferrochelatase PN96_09400 PF05191 Adenylate kinase, active site lid PN96_09405 PF00183 Hsp90 protein PN96_09405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PN96_09410 PF00486 Transcriptional regulatory protein, C terminal PN96_09415 PF17323 Trans-membrane regulatory protein ToxS PN96_09430 PF12850 Calcineurin-like phosphoesterase superfamily domain PN96_09450 PF07556 Protein of unknown function (DUF1538) PN96_09455 PF07556 Protein of unknown function (DUF1538) PN96_09460 PF08338 Domain of unknown function (DUF1731) PN96_09460 PF01370 NAD dependent epimerase/dehydratase family PN96_09465 PF00106 short chain dehydrogenase PN96_09470 PF00085 Thioredoxin PN96_09475 PF16200 C-terminal region of band_7 PN96_09475 PF01145 SPFH domain / Band 7 family PN96_09490 PF03573 outer membrane porin, OprD family PN96_09495 PF01653 NAD-dependent DNA ligase adenylation domain PN96_09495 PF12826 Helix-hairpin-helix motif PN96_09495 PF03119 NAD-dependent DNA ligase C4 zinc finger domain PN96_09495 PF03120 NAD-dependent DNA ligase OB-fold domain PN96_09495 PF00533 BRCA1 C Terminus (BRCT) domain PN96_09500 PF04354 ZipA, C-terminal FtsZ-binding domain PN96_09510 PF00291 Pyridoxal-phosphate dependent enzyme PN96_09515 PF00381 PTS HPr component phosphorylation site PN96_09520 PF02896 PEP-utilising enzyme, TIM barrel domain PN96_09520 PF05524 PEP-utilising enzyme, N-terminal PN96_09520 PF00391 PEP-utilising enzyme, mobile domain PN96_09525 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 PN96_09530 PF00669 Bacterial flagellin N-terminal helical region PN96_09530 PF07196 Flagellin hook IN motif PN96_09530 PF00700 Bacterial flagellin C-terminal helical region PN96_09535 PF00669 Bacterial flagellin N-terminal helical region PN96_09540 PF07196 Flagellin hook IN motif PN96_09540 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PN96_09545 PF10135 Rod binding protein PN96_09545 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase PN96_09550 PF02119 Flagellar P-ring protein PN96_09555 PF02107 Flagellar L-ring protein PN96_09560 PF00460 Flagella basal body rod protein PN96_09560 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PN96_09565 PF00460 Flagella basal body rod protein PN96_09565 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PN96_09570 PF00460 Flagella basal body rod protein PN96_09570 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PN96_09570 PF07559 Flagellar basal body protein FlaE PN96_09575 PF03963 Flagellar hook capping protein - N-terminal region PN96_09575 PF13861 FlgD Tudor-like domain PN96_09575 PF13860 FlgD Ig-like domain PN96_09580 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PN96_09580 PF00460 Flagella basal body rod protein PN96_09585 PF00460 Flagella basal body rod protein PN96_09590 PF01739 CheR methyltransferase, SAM binding domain PN96_09590 PF03705 CheR methyltransferase, all-alpha domain PN96_09595 PF01584 CheW-like domain PN96_09595 PF00072 Response regulator receiver domain PN96_09640 PF01389 OmpA-like transmembrane domain PN96_09640 PF00691 OmpA family PN96_09645 PF00749 tRNA synthetases class I (E and Q), catalytic domain PN96_09650 PF00403 Heavy-metal-associated domain PN96_09680 PF01713 Smr domain PN96_09685 PF01479 S4 domain PN96_09685 PF00849 RNA pseudouridylate synthase PN96_09690 PF04073 Aminoacyl-tRNA editing domain PN96_09695 PF00149 Calcineurin-like phosphoesterase PN96_09695 PF02872 5'-nucleotidase, C-terminal domain PN96_09700 PF00793 DAHP synthetase I family PN96_09705 PF13369 Transglutaminase-like superfamily PN96_09710 PF04247 Invasion gene expression up-regulator, SirB PN96_09715 PF13847 Methyltransferase domain PN96_09715 PF17827 PrmC N-terminal domain PN96_09720 PF00472 RF-1 domain PN96_09720 PF03462 PCRF domain PN96_09725 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain PN96_09725 PF01488 Shikimate / quinate 5-dehydrogenase PN96_09725 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain PN96_09730 PF03550 Outer membrane lipoprotein LolB PN96_09735 PF08544 GHMP kinases C terminal PN96_09735 PF00288 GHMP kinases N terminal domain PN96_09740 PF14572 Phosphoribosyl synthetase-associated domain PN96_09740 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase PN96_09745 PF01195 Peptidyl-tRNA hydrolase PN96_09750 PF01926 50S ribosome-binding GTPase PN96_09750 PF06071 Protein of unknown function (DUF933) PN96_09860 PF01494 FAD binding domain PN96_09865 PF00919 Uncharacterized protein family UPF0004 PN96_09865 PF04055 Radical SAM superfamily PN96_09865 PF01938 TRAM domain PN96_09870 PF02562 PhoH-like protein PN96_09875 PF02130 Uncharacterized protein family UPF0054 PN96_09880 PF03471 Transporter associated domain PN96_09880 PF00571 CBS domain PN96_09885 PF00795 Carbon-nitrogen hydrolase PN96_09890 PF07295 Zinc-ribbon containing domain PN96_09895 PF13603 Leucyl-tRNA synthetase, Domain 2 PN96_09895 PF00133 tRNA synthetases class I (I, L, M and V) PN96_09895 PF08264 Anticodon-binding domain of tRNA PN96_09900 PF04390 Lipopolysaccharide-assembly PN96_09905 PF14840 Processivity clamp loader gamma complex DNA pol III C-term PN96_09905 PF06144 DNA polymerase III, delta subunit PN96_09915 PF02590 Predicted SPOUT methyltransferase PN96_09920 PF00905 Penicillin binding protein transpeptidase domain PN96_09920 PF03717 Penicillin-binding Protein dimerisation domain PN96_09925 PF01098 Cell cycle protein PN96_09930 PF03330 Lytic transglycolase PN96_09930 PF05036 Sporulation related domain PN96_09935 PF07943 Penicillin-binding protein 5, C-terminal domain PN96_09935 PF00768 D-alanyl-D-alanine carboxypeptidase PN96_09940 PF04359 Protein of unknown function (DUF493) PN96_09945 PF03099 Biotin/lipoate A/B protein ligase family PN96_09950 PF04055 Radical SAM superfamily PN96_09950 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family PN96_09955 PF00464 Serine hydroxymethyltransferase PN96_09965 PF16657 Maltogenic Amylase, C-terminal domain PN96_09965 PF00128 Alpha amylase, catalytic domain PN96_09970 PF02378 Phosphotransferase system, EIIC PN96_09970 PF00367 phosphotransferase system, EIIB PN96_09975 PF00356 Bacterial regulatory proteins, lacI family PN96_09985 PF09383 NIL domain PN96_09985 PF00005 ABC transporter PN96_09990 PF00528 Binding-protein-dependent transport system inner membrane component PN96_09995 PF03180 NLPA lipoprotein PN96_10000 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) PN96_10005 PF07348 Syd protein (SUKH-2) PN96_10010 PF14489 QueF-like protein PN96_10010 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term PN96_10020 PF00990 Diguanylate cyclase, GGDEF domain PN96_10020 PF00072 Response regulator receiver domain PN96_10025 PF03641 Possible lysine decarboxylase PN96_10025 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases PN96_10025 PF11892 Domain of unknown function (DUF3412) PN96_10030 PF01367 5'-3' exonuclease, C-terminal SAM fold PN96_10030 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain PN96_10035 PF01728 FtsJ-like methyltransferase PN96_10035 PF18125 RlmM ferredoxin-like domain PN96_10040 PF04241 Protein of unknown function (DUF423) PN96_10050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_10050 PF03466 LysR substrate binding domain PN96_10055 PF02568 Thiamine biosynthesis protein (ThiI) PN96_10055 PF02926 THUMP domain PN96_10060 PF00691 OmpA family PN96_10065 PF01618 MotA/TolQ/ExbB proton channel family PN96_10070 PF02609 Exonuclease VII small subunit PN96_10075 PF00348 Polyprenyl synthetase PN96_10080 PF02780 Transketolase, C-terminal domain PN96_10080 PF02779 Transketolase, pyrimidine binding domain PN96_10080 PF13292 1-deoxy-D-xylulose-5-phosphate synthase PN96_10085 PF04608 Phosphatidylglycerophosphatase A PN96_10090 PF02769 AIR synthase related protein, C-terminal domain PN96_10090 PF00586 AIR synthase related protein, N-terminal domain PN96_10095 PF01029 NusB family PN96_10100 PF00885 6,7-dimethyl-8-ribityllumazine synthase PN96_10105 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase PN96_10105 PF00925 GTP cyclohydrolase II PN96_10110 PF00677 Lumazine binding domain PN96_10115 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PN96_10115 PF01872 RibD C-terminal domain PN96_10120 PF03477 ATP cone domain PN96_10125 PF00171 Aldehyde dehydrogenase family PN96_10130 PF01472 PUA domain PN96_10130 PF00696 Amino acid kinase family PN96_10135 PF07417 Sigma factor-binding transcriptional regulator Crl PN96_10145 PF00156 Phosphoribosyl transferase domain PN96_10150 PF00860 Permease family PN96_10155 PF07687 Peptidase dimerisation domain PN96_10155 PF01546 Peptidase family M20/M25/M40 PN96_10190 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain PN96_10190 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal PN96_10190 PF02769 AIR synthase related protein, C-terminal domain PN96_10195 PF00497 Bacterial extracellular solute-binding proteins, family 3 PN96_10195 PF01464 Transglycosylase SLT domain PN96_10200 PF14437 MafB19-like deaminase PN96_10205 PF03806 AbgT putative transporter family PN96_10230 PF00114 Pilin (bacterial filament) PN96_10230 PF07963 Prokaryotic N-terminal methylation motif PN96_10235 PF00226 DnaJ domain PN96_10235 PF00684 DnaJ central domain PN96_10235 PF01556 DnaJ C terminal domain PN96_10240 PF00012 Hsp70 protein PN96_10245 PF00375 Sodium:dicarboxylate symporter family PN96_10250 PF01025 GrpE PN96_10255 PF01513 ATP-NAD kinase PN96_10260 PF02463 RecF/RecN/SMC N terminal domain PN96_10265 PF04355 SmpA / OmlA family PN96_10270 PF03658 RnfH family Ubiquitin PN96_10275 PF03364 Polyketide cyclase / dehydrase and lipid transport PN96_10280 PF01668 SmpB protein PN96_10285 PF00196 Bacterial regulatory proteins, luxR family PN96_10285 PF00072 Response regulator receiver domain PN96_10290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PN96_10290 PF07730 Histidine kinase PN96_10290 PF05384 Sensor protein DegS PN96_10310 PF02311 AraC-like ligand binding domain PN96_10310 PF12833 Helix-turn-helix domain PN96_10320 PF05336 L-rhamnose mutarotase PN96_10325 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PN96_10330 PF06134 L-rhamnose isomerase (RhaA) PN96_10335 PF00596 Class II Aldolase and Adducin N-terminal domain PN96_10340 PF03466 LysR substrate binding domain PN96_10340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_10345 PF00583 Acetyltransferase (GNAT) family PN96_10345 PF00795 Carbon-nitrogen hydrolase PN96_10365 PF00202 Aminotransferase class-III PN96_10370 PF01053 Cys/Met metabolism PLP-dependent enzyme PN96_10380 PF01266 FAD dependent oxidoreductase PN96_10385 PF01235 Sodium:alanine symporter family PN96_10390 PF03466 LysR substrate binding domain PN96_10390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_10395 PF07687 Peptidase dimerisation domain PN96_10395 PF01546 Peptidase family M20/M25/M40 PN96_10400 PF07690 Major Facilitator Superfamily PN96_10410 PF01184 GPR1/FUN34/yaaH family PN96_10425 PF00117 Glutamine amidotransferase class-I PN96_10425 PF00958 GMP synthase C terminal domain PN96_10425 PF02540 NAD synthase PN96_10430 PF00571 CBS domain PN96_10430 PF00478 IMP dehydrogenase / GMP reductase domain PN96_10435 PF13742 OB-fold nucleic acid binding domain PN96_10435 PF02601 Exonuclease VII, large subunit PN96_10450 PF01926 50S ribosome-binding GTPase PN96_10450 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal PN96_10455 PF13360 PQQ-like domain PN96_10460 PF09976 Tetratricopeptide repeat-like domain PN96_10465 PF13393 Histidyl-tRNA synthetase PN96_10465 PF03129 Anticodon binding domain PN96_10470 PF04551 GcpE protein PN96_10475 PF13464 Domain of unknown function (DUF4115) PN96_10480 PF04055 Radical SAM superfamily PN96_10485 PF00334 Nucleoside diphosphate kinase PN96_10490 PF12404 Peptidase PN96_10490 PF00883 Cytosol aminopeptidase family, catalytic domain PN96_10495 PF04384 Iron-sulphur cluster assembly PN96_10500 PF00111 2Fe-2S iron-sulfur cluster binding domain PN96_10505 PF00012 Hsp70 protein PN96_10510 PF07743 HSCB C-terminal oligomerisation domain PN96_10510 PF00226 DnaJ domain PN96_10515 PF01521 Iron-sulphur cluster biosynthesis PN96_10520 PF01592 NifU-like N terminal domain PN96_10525 PF00266 Aminotransferase class-V PN96_10530 PF02082 Transcriptional regulator PN96_10535 PF00588 SpoU rRNA Methylase family PN96_10540 PF00459 Inositol monophosphatase family PN96_10545 PF02355 Protein export membrane protein PN96_10545 PF07549 SecD/SecF GG Motif PN96_10550 PF07549 SecD/SecF GG Motif PN96_10550 PF02355 Protein export membrane protein PN96_10550 PF13721 SecD export protein N-terminal TM region PN96_10555 PF02699 Preprotein translocase subunit PN96_10560 PF01702 Queuine tRNA-ribosyltransferase PN96_10565 PF02547 Queuosine biosynthesis protein PN96_10575 PF00571 CBS domain PN96_10580 PF00463 Isocitrate lyase family PN96_10585 PF01274 Malate synthase PN96_10590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_10590 PF03466 LysR substrate binding domain PN96_10595 PF00578 AhpC/TSA family PN96_10595 PF10417 C-terminal domain of 1-Cys peroxiredoxin PN96_10600 PF03932 CutC family PN96_10605 PF03976 Polyphosphate kinase 2 (PPK2) PN96_10610 PF01895 PhoU domain PN96_10615 PF00005 ABC transporter PN96_10620 PF00528 Binding-protein-dependent transport system inner membrane component PN96_10625 PF00528 Binding-protein-dependent transport system inner membrane component PN96_10630 PF13090 Polyphosphate kinase C-terminal domain 2 PN96_10630 PF17941 Polyphosphate kinase C-terminal domain 1 PN96_10630 PF02503 Polyphosphate kinase middle domain PN96_10630 PF13089 Polyphosphate kinase N-terminal domain PN96_10635 PF02541 Ppx/GppA phosphatase family PN96_10640 PF12849 PBP superfamily domain PN96_10645 PF00989 PAS fold PN96_10645 PF00512 His Kinase A (phospho-acceptor) domain PN96_10645 PF11808 Phosphate regulon sensor protein PhoR PN96_10645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PN96_10650 PF00486 Transcriptional regulatory protein, C terminal PN96_10650 PF00072 Response regulator receiver domain PN96_10660 PF04381 Putative exonuclease, RdgC PN96_10670 PF00037 4Fe-4S binding domain PN96_10680 PF03411 Penicillin-insensitive murein endopeptidase PN96_10725 PF01979 Amidohydrolase family PN96_10735 PF00005 ABC transporter PN96_10750 PF02861 Clp amino terminal domain, pathogenicity island component PN96_10750 PF17871 AAA lid domain PN96_10750 PF07724 AAA domain (Cdc48 subfamily) PN96_10750 PF10431 C-terminal, D2-small domain, of ClpB protein PN96_10750 PF00004 ATPase family associated with various cellular activities (AAA) PN96_10760 PF01479 S4 domain PN96_10760 PF00849 RNA pseudouridylate synthase PN96_10765 PF13525 Outer membrane lipoprotein PN96_10770 PF01464 Transglycosylase SLT domain PN96_10770 PF00497 Bacterial extracellular solute-binding proteins, family 3 PN96_10775 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein PN96_10780 PF01817 Chorismate mutase type II PN96_10780 PF00800 Prephenate dehydratase PN96_10785 PF01931 Protein of unknown function DUF84 PN96_10790 PF01371 Trp repressor protein PN96_10795 PF01464 Transglycosylase SLT domain PN96_10795 PF14718 Soluble lytic murein transglycosylase L domain PN96_10800 PF00005 ABC transporter PN96_10800 PF12848 ABC transporter PN96_10805 PF01551 Peptidase family M23 PN96_10805 PF04225 Opacity-associated protein A LysM-like domain PN96_10810 PF02153 Prephenate dehydrogenase PN96_10810 PF01817 Chorismate mutase type II PN96_10815 PF00793 DAHP synthetase I family PN96_10820 PF00933 Glycosyl hydrolase family 3 N terminal domain PN96_10825 PF03702 Anhydro-N-acetylmuramic acid kinase PN96_10830 PF01380 SIS domain PN96_10845 PF02554 Carbon starvation protein CstA PN96_10850 PF06580 Histidine kinase PN96_10850 PF07694 5TMR of 5TMR-LYT PN96_10855 PF00072 Response regulator receiver domain PN96_10855 PF04397 LytTr DNA-binding domain PN96_10860 PF02401 LytB protein PN96_10865 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PN96_10870 PF01252 Signal peptidase (SPase) II PN96_10875 PF08264 Anticodon-binding domain of tRNA PN96_10875 PF00133 tRNA synthetases class I (I, L, M and V) PN96_10875 PF06827 Zinc finger found in FPG and IleRS PN96_10880 PF06574 FAD synthetase PN96_10880 PF01687 Riboflavin kinase PN96_10885 PF03023 Lipid II flippase MurJ PN96_10890 PF01649 Ribosomal protein S20 PN96_10895 PF01022 Bacterial regulatory protein, arsR family PN96_10900 PF03466 LysR substrate binding domain PN96_10900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_10905 PF02690 Na+/Pi-cotransporter PN96_10915 PF00303 Thymidylate synthase PN96_10920 PF01790 Prolipoprotein diacylglyceryl transferase PN96_10925 PF01925 Sulfite exporter TauE/SafE PN96_10930 PF02896 PEP-utilising enzyme, TIM barrel domain PN96_10930 PF00391 PEP-utilising enzyme, mobile domain PN96_10930 PF05524 PEP-utilising enzyme, N-terminal PN96_10930 PF01590 GAF domain PN96_10935 PF00293 NUDIX domain PN96_10940 PF02976 DNA mismatch repair enzyme MutH PN96_10950 PF00248 Aldo/keto reductase family PN96_10960 PF02954 Bacterial regulatory protein, Fis family PN96_10960 PF00158 Sigma-54 interaction domain PN96_10960 PF00989 PAS fold PN96_10965 PF00152 tRNA synthetases class II (D, K and N) PN96_10965 PF01336 OB-fold nucleic acid binding domain PN96_10970 PF00472 RF-1 domain PN96_10970 PF03462 PCRF domain PN96_10975 PF17768 RecJ OB domain PN96_10975 PF02272 DHHA1 domain PN96_10975 PF01368 DHH family PN96_10980 PF10411 Disulfide bond isomerase protein N-terminus PN96_10980 PF13098 Thioredoxin-like domain PN96_10985 PF00589 Phage integrase family PN96_10985 PF02899 Phage integrase, N-terminal SAM-like domain PN96_10990 PF00258 Flavodoxin PN96_10995 PF05525 Branched-chain amino acid transport protein PN96_11000 PF05175 Methyltransferase small domain PN96_11005 PF00271 Helicase conserved C-terminal domain PN96_11005 PF00270 DEAD/DEAH box helicase PN96_11010 PF03883 Peroxide stress protein YaaA PN96_11015 PF01235 Sodium:alanine symporter family PN96_11030 PF03167 Uracil DNA glycosylase superfamily PN96_11035 PF01261 Xylose isomerase-like TIM barrel PN96_11040 PF01228 Glycine radical PN96_11045 PF14821 Threonine synthase N terminus PN96_11045 PF00291 Pyridoxal-phosphate dependent enzyme PN96_11050 PF08544 GHMP kinases C terminal PN96_11050 PF00288 GHMP kinases N terminal domain PN96_11055 PF03447 Homoserine dehydrogenase, NAD binding domain PN96_11055 PF00742 Homoserine dehydrogenase PN96_11055 PF01842 ACT domain PN96_11055 PF00696 Amino acid kinase family PN96_11055 PF13840 ACT domain PN96_11065 PF03737 Aldolase/RraA PN96_11075 PF00072 Response regulator receiver domain PN96_11075 PF00486 Transcriptional regulatory protein, C terminal PN96_11085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PN96_11085 PF00072 Response regulator receiver domain PN96_11085 PF00512 His Kinase A (phospho-acceptor) domain PN96_11085 PF01627 Hpt domain PN96_11085 PF00989 PAS fold PN96_11085 PF18415 Histidine kinase receptor ArcB trans-membrane domain PN96_11090 PF16199 Radical_SAM C-terminal domain PN96_11090 PF04055 Radical SAM superfamily PN96_11095 PF00310 Glutamine amidotransferases class-II PN96_11095 PF01645 Conserved region in glutamate synthase PN96_11095 PF01493 GXGXG motif PN96_11095 PF04898 Glutamate synthase central domain PN96_11100 PF07992 Pyridine nucleotide-disulphide oxidoreductase PN96_11100 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster PN96_11105 PF00310 Glutamine amidotransferases class-II PN96_11105 PF01645 Conserved region in glutamate synthase PN96_11105 PF01493 GXGXG motif PN96_11105 PF04898 Glutamate synthase central domain PN96_11110 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster PN96_11110 PF07992 Pyridine nucleotide-disulphide oxidoreductase PN96_11120 PF01048 Phosphorylase superfamily PN96_11130 PF01497 Periplasmic binding protein PN96_11135 PF03458 UPF0126 domain PN96_11140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_11140 PF03466 LysR substrate binding domain PN96_11145 PF01925 Sulfite exporter TauE/SafE PN96_11150 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PN96_11150 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain PN96_11150 PF02142 MGS-like domain PN96_11155 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain PN96_11155 PF00117 Glutamine amidotransferase class-I PN96_11160 PF01113 Dihydrodipicolinate reductase, N-terminus PN96_11160 PF05173 Dihydrodipicolinate reductase, C-terminus PN96_11165 PF00293 NUDIX domain PN96_11170 PF07516 SecA Wing and Scaffold domain PN96_11170 PF01043 SecA preprotein cross-linking domain PN96_11170 PF07517 SecA DEAD-like domain PN96_11170 PF02810 SEC-C motif PN96_11180 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase PN96_11185 PF12327 FtsZ family, C-terminal domain PN96_11185 PF00091 Tubulin/FtsZ family, GTPase domain PN96_11190 PF02491 SHS2 domain inserted in FTSA PN96_11195 PF08478 POTRA domain, FtsQ-type PN96_11195 PF03799 Cell division protein FtsQ PN96_11200 PF02875 Mur ligase family, glutamate ligase domain PN96_11200 PF01225 Mur ligase family, catalytic domain PN96_11200 PF08245 Mur ligase middle domain PN96_11205 PF04101 Glycosyltransferase family 28 C-terminal domain PN96_11205 PF03033 Glycosyltransferase family 28 N-terminal domain PN96_11210 PF01098 Cell cycle protein PN96_11215 PF02875 Mur ligase family, glutamate ligase domain PN96_11215 PF08245 Mur ligase middle domain PN96_11220 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 PN96_11220 PF00953 Glycosyl transferase family 4 PN96_11225 PF02875 Mur ligase family, glutamate ligase domain PN96_11225 PF01225 Mur ligase family, catalytic domain PN96_11225 PF08245 Mur ligase middle domain PN96_11230 PF08245 Mur ligase middle domain PN96_11230 PF02875 Mur ligase family, glutamate ligase domain PN96_11230 PF01225 Mur ligase family, catalytic domain PN96_11235 PF00905 Penicillin binding protein transpeptidase domain PN96_11235 PF03717 Penicillin-binding Protein dimerisation domain PN96_11240 PF04999 Cell division protein FtsL PN96_11245 PF01795 MraW methylase family PN96_11250 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PN96_11255 PF04348 LppC putative lipoprotein PN96_11260 PF02021 Uncharacterised protein family UPF0102 PN96_11265 PF13580 SIS domain PN96_11270 PF04972 BON domain PN96_11275 PF04386 Stringent starvation protein B PN96_11280 PF02798 Glutathione S-transferase, N-terminal domain PN96_11280 PF00043 Glutathione S-transferase, C-terminal domain PN96_11285 PF02167 Cytochrome C1 family PN96_11290 PF00033 Cytochrome b/b6/petB PN96_11290 PF00032 Cytochrome b(C-terminal)/b6/petD PN96_11295 PF00355 Rieske [2Fe-2S] domain PN96_11295 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal PN96_11300 PF00380 Ribosomal protein S9/S16 PN96_11305 PF00572 Ribosomal protein L13 PN96_11310 PF03969 AFG1-like ATPase PN96_11315 PF06295 Protein of unknown function (DUF1043) PN96_11320 PF00595 PDZ domain PN96_11325 PF13180 PDZ domain PN96_11330 PF03989 DNA gyrase C-terminal domain, beta-propeller PN96_11330 PF00521 DNA gyrase/topoisomerase IV, subunit A PN96_11335 PF01751 Toprim domain PN96_11335 PF00204 DNA gyrase B PN96_11335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PN96_11335 PF00986 DNA gyrase B subunit, carboxyl terminus PN96_11340 PF05728 Uncharacterised protein family (UPF0227) PN96_11345 PF00149 Calcineurin-like phosphoesterase PN96_11350 PF06853 Protein of unknown function (DUF1249) PN96_11355 PF00293 NUDIX domain PN96_11360 PF02321 Outer membrane efflux protein PN96_11365 PF01467 Cytidylyltransferase-like PN96_11365 PF00294 pfkB family carbohydrate kinase PN96_11370 PF03710 Glutamate-ammonia ligase adenylyltransferase PN96_11370 PF08335 GlnD PII-uridylyltransferase PN96_11375 PF02743 Cache domain PN96_11375 PF00672 HAMP domain PN96_11375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PN96_11385 PF01928 CYTH domain PN96_11390 PF01865 Protein of unknown function DUF47 PN96_11395 PF01384 Phosphate transporter family PN96_11400 PF08239 Bacterial SH3 domain PN96_11410 PF13401 AAA domain PN96_11410 PF01471 Putative peptidoglycan binding domain PN96_11415 PF12627 Probable RNA and SrmB- binding site of polymerase A PN96_11415 PF01743 Poly A polymerase head domain PN96_11415 PF01966 HD domain PN96_11420 PF02673 Bacitracin resistance protein BacA PN96_11425 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) PN96_11430 PF02152 Dihydroneopterin aldolase PN96_11435 PF02660 Glycerol-3-phosphate acyltransferase PN96_11440 PF00561 alpha/beta hydrolase fold PN96_11445 PF00814 Glycoprotease family PN96_11450 PF01165 Ribosomal protein S21 PN96_11455 PF09424 Yqey-like protein PN96_11460 PF08275 DNA primase catalytic core, N-terminal domain PN96_11460 PF10410 DnaB-helicase binding domain of primase PN96_11460 PF01807 CHC2 zinc finger PN96_11460 PF08278 DNA primase DnaG DnaB-binding PN96_11465 PF00140 Sigma-70 factor, region 1.2 PN96_11465 PF04545 Sigma-70, region 4 PN96_11465 PF04539 Sigma-70 region 3 PN96_11465 PF03979 Sigma-70 factor, region 1.1 PN96_11465 PF04546 Sigma-70, non-essential region PN96_11465 PF04542 Sigma-70 region 2 PN96_11475 PF00669 Bacterial flagellin N-terminal helical region PN96_11475 PF07196 Flagellin hook IN motif PN96_11475 PF00700 Bacterial flagellin C-terminal helical region PN96_11480 PF03180 NLPA lipoprotein PN96_11505 PF01979 Amidohydrolase family PN96_11515 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit PN96_11515 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PN96_11515 PF02378 Phosphotransferase system, EIIC PN96_11520 PF08125 Mannitol dehydrogenase C-terminal domain PN96_11520 PF01232 Mannitol dehydrogenase Rossmann domain PN96_11525 PF05068 Mannitol repressor PN96_11530 PF13580 SIS domain PN96_11535 PF00367 phosphotransferase system, EIIB PN96_11535 PF02378 Phosphotransferase system, EIIC PN96_11540 PF01380 SIS domain PN96_11540 PF01418 Helix-turn-helix domain, rpiR family PN96_11545 PF01380 SIS domain PN96_11550 PF00455 DeoR C terminal sensor domain PN96_11550 PF08220 DeoR-like helix-turn-helix domain PN96_11555 PF02887 Pyruvate kinase, alpha/beta domain PN96_11555 PF00224 Pyruvate kinase, barrel domain PN96_11560 PF10369 Small subunit of acetolactate synthase PN96_11565 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PN96_11565 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PN96_11565 PF00205 Thiamine pyrophosphate enzyme, central domain PN96_11570 PF00501 AMP-binding enzyme PN96_11575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_11575 PF03466 LysR substrate binding domain PN96_11585 PF01569 PAP2 superfamily PN96_11595 PF00682 HMGL-like PN96_11595 PF08502 LeuA allosteric (dimerisation) domain PN96_11600 PF00180 Isocitrate/isopropylmalate dehydrogenase PN96_11605 PF00330 Aconitase family (aconitate hydratase) PN96_11610 PF00694 Aconitase C-terminal domain PN96_11620 PF00226 DnaJ domain PN96_11620 PF05099 Tellurite resistance protein TerB PN96_11625 PF04453 LPS transport system D PN96_11625 PF03968 OstA-like protein PN96_11630 PF09312 SurA N-terminal domain PN96_11635 PF04166 Pyridoxal phosphate biosynthetic protein PdxA PN96_11640 PF00398 Ribosomal RNA adenine dimethylase PN96_11645 PF04379 ApaG domain PN96_11650 PF00149 Calcineurin-like phosphoesterase PN96_11655 PF00186 Dihydrofolate reductase PN96_11660 PF12821 Threonine/Serine exporter, ThrE PN96_11665 PF06738 Putative threonine/serine exporter PN96_11670 PF01926 50S ribosome-binding GTPase PN96_11670 PF01018 GTP1/OBG PN96_11675 PF01016 Ribosomal L27 protein PN96_11680 PF00829 Ribosomal prokaryotic L21 protein PN96_11685 PF00348 Polyprenyl synthetase PN96_11695 PF00056 lactate/malate dehydrogenase, NAD binding domain PN96_11695 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain PN96_11700 PF02863 Arginine repressor, C-terminal domain PN96_11700 PF01316 Arginine repressor, DNA binding domain PN96_11715 PF00582 Universal stress protein family PN96_11720 PF00005 ABC transporter PN96_11725 PF00528 Binding-protein-dependent transport system inner membrane component PN96_11735 PF02441 Flavoprotein PN96_11740 PF01225 Mur ligase family, catalytic domain PN96_11740 PF08245 Mur ligase middle domain PN96_11740 PF02875 Mur ligase family, glutamate ligase domain PN96_11745 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain PN96_11750 PF00719 Inorganic pyrophosphatase PN96_11755 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like PN96_11760 PF04357 TamB, inner membrane protein subunit of TAM complex PN96_11765 PF07244 Surface antigen variable number repeat PN96_11765 PF17243 POTRA domain TamA domain 1 PN96_11765 PF01103 Surface antigen PN96_11770 PF01625 Peptide methionine sulfoxide reductase PN96_11775 PF06526 Protein of unknown function (DUF1107) PN96_11780 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) PN96_11790 PF00005 ABC transporter PN96_11815 PF03600 Citrate transporter PN96_11815 PF02080 TrkA-C domain PN96_11820 PF00009 Elongation factor Tu GTP binding domain PN96_11825 PF01507 Phosphoadenosine phosphosulfate reductase family PN96_11830 PF14824 Sirohaem biosynthesis protein central PN96_11830 PF10414 Sirohaem synthase dimerisation region PN96_11830 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PN96_11835 PF02872 5'-nucleotidase, C-terminal domain PN96_11835 PF00149 Calcineurin-like phosphoesterase PN96_11845 PF00270 DEAD/DEAH box helicase PN96_11845 PF00271 Helicase conserved C-terminal domain PN96_11845 PF03880 DbpA RNA binding domain PN96_11850 PF13673 Acetyltransferase (GNAT) domain PN96_11860 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PN96_11860 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase PN96_11870 PF01196 Ribosomal protein L17 PN96_11875 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain PN96_11875 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain PN96_11875 PF01000 RNA polymerase Rpb3/RpoA insert domain PN96_11880 PF00163 Ribosomal protein S4/S9 N-terminal domain PN96_11880 PF01479 S4 domain PN96_11885 PF00411 Ribosomal protein S11 PN96_11890 PF00416 Ribosomal protein S13/S18 PN96_11895 PF00444 Ribosomal protein L36 PN96_11900 PF00344 SecY translocase PN96_11910 PF00327 Ribosomal protein L30p/L7e PN96_11915 PF03719 Ribosomal protein S5, C-terminal domain PN96_11915 PF00333 Ribosomal protein S5, N-terminal domain PN96_11920 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast PN96_11925 PF00347 Ribosomal protein L6 PN96_11930 PF00410 Ribosomal protein S8 PN96_11935 PF00253 Ribosomal protein S14p/S29e PN96_11940 PF00281 Ribosomal protein L5 PN96_11940 PF00673 ribosomal L5P family C-terminus PN96_11945 PF00467 KOW motif PN96_11945 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 PN96_11950 PF00238 Ribosomal protein L14p/L23e PN96_11955 PF00366 Ribosomal protein S17 PN96_11960 PF00831 Ribosomal L29 protein PN96_11965 PF00252 Ribosomal protein L16p/L10e PN96_11970 PF07650 KH domain PN96_11970 PF00189 Ribosomal protein S3, C-terminal domain PN96_11975 PF00237 Ribosomal protein L22p/L17e PN96_11980 PF00203 Ribosomal protein S19 PN96_11985 PF00181 Ribosomal Proteins L2, RNA binding domain PN96_11985 PF03947 Ribosomal Proteins L2, C-terminal domain PN96_11990 PF00276 Ribosomal protein L23 PN96_11995 PF00573 Ribosomal protein L4/L1 family PN96_12000 PF00297 Ribosomal protein L3 PN96_12005 PF00338 Ribosomal protein S10p/S20e PN96_12010 PF01197 Ribosomal protein L31 PN96_12015 PF00271 Helicase conserved C-terminal domain PN96_12015 PF17764 3′ DNA-binding domain (3′BD) PN96_12015 PF18074 Primosomal protein N C-terminal domain PN96_12015 PF00270 DEAD/DEAH box helicase PN96_12015 PF18319 PriA DNA helicase Cys-rich region (CRR) domain PN96_12020 PF00356 Bacterial regulatory proteins, lacI family PN96_12030 PF00227 Proteasome subunit PN96_12035 PF07724 AAA domain (Cdc48 subfamily) PN96_12035 PF00004 ATPase family associated with various cellular activities (AAA) PN96_12040 PF01040 UbiA prenyltransferase family PN96_12045 PF03737 Aldolase/RraA PN96_12050 PF06005 Cell division protein ZapB PN96_12055 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded PN96_12060 PF08220 DeoR-like helix-turn-helix domain PN96_12060 PF00455 DeoR C terminal sensor domain PN96_12070 PF05656 Protein of unknown function (DUF805) PN96_12075 PF05686 Glycosyl transferase family 90 PN96_12085 PF00121 Triosephosphate isomerase PN96_12095 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain PN96_12095 PF10996 Beta-Casp domain PN96_12095 PF00753 Metallo-beta-lactamase superfamily PN96_12100 PF02719 Polysaccharide biosynthesis protein PN96_12105 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family PN96_12115 PF02397 Bacterial sugar transferase PN96_12125 PF13439 Glycosyltransferase Family 4 PN96_12125 PF00534 Glycosyl transferases group 1 PN96_12130 PF02709 N-terminal domain of galactosyltransferase PN96_12130 PF00535 Glycosyl transferase family 2 PN96_12135 PF13439 Glycosyltransferase Family 4 PN96_12135 PF00534 Glycosyl transferases group 1 PN96_12155 PF01370 NAD dependent epimerase/dehydratase family PN96_12165 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain PN96_12165 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain PN96_12165 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain PN96_12170 PF13807 G-rich domain on putative tyrosine kinase PN96_12170 PF02706 Chain length determinant protein PN96_12170 PF13614 AAA domain PN96_12175 PF01451 Low molecular weight phosphotyrosine protein phosphatase PN96_12180 PF10531 SLBB domain PN96_12180 PF18412 Outer-membrane lipoprotein Wza C-terminal domain PN96_12180 PF02563 Polysaccharide biosynthesis/export protein PN96_12185 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain PN96_12185 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain PN96_12185 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain PN96_12195 PF10531 SLBB domain PN96_12195 PF02563 Polysaccharide biosynthesis/export protein PN96_12200 PF01061 ABC-2 type transporter PN96_12210 PF00483 Nucleotidyl transferase PN96_12215 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase PN96_12230 PF04321 RmlD substrate binding domain PN96_12235 PF16363 GDP-mannose 4,6 dehydratase PN96_12260 PF00483 Nucleotidyl transferase PN96_12300 PF00005 ABC transporter PN96_12305 PF03600 Citrate transporter PN96_12305 PF02080 TrkA-C domain PN96_12310 PF01507 Phosphoadenosine phosphosulfate reductase family PN96_12325 PF00009 Elongation factor Tu GTP binding domain PN96_12330 PF00953 Glycosyl transferase family 4 PN96_12350 PF06082 Exopolysaccharide biosynthesis protein YbjH PN96_12355 PF01370 NAD dependent epimerase/dehydratase family PN96_12360 PF03279 Bacterial lipid A biosynthesis acyltransferase PN96_12365 PF01075 Glycosyltransferase family 9 (heptosyltransferase) PN96_12370 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) PN96_12385 PF03275 UDP-galactopyranose mutase PN96_12395 PF01219 Prokaryotic diacylglycerol kinase PN96_12400 PF00534 Glycosyl transferases group 1 PN96_12400 PF13439 Glycosyltransferase Family 4 PN96_12410 PF01075 Glycosyltransferase family 9 (heptosyltransferase) PN96_12415 PF00534 Glycosyl transferases group 1 PN96_12415 PF13439 Glycosyltransferase Family 4 PN96_12420 PF01467 Cytidylyltransferase-like PN96_12425 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain PN96_12425 PF06827 Zinc finger found in FPG and IleRS PN96_12425 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain PN96_12435 PF00471 Ribosomal protein L33 PN96_12440 PF00830 Ribosomal L28 family PN96_12445 PF04002 RadC-like JAB domain PN96_12450 PF02441 Flavoprotein PN96_12450 PF04127 DNA / pantothenate metabolism flavoprotein PN96_12455 PF00440 Bacterial regulatory proteins, tetR family PN96_12460 PF03279 Bacterial lipid A biosynthesis acyltransferase PN96_12465 PF00156 Phosphoribosyl transferase domain PN96_12470 PF01138 3' exoribonuclease family, domain 1 PN96_12470 PF03725 3' exoribonuclease family, domain 2 PN96_12475 PF08340 Domain of unknown function (DUF1732) PN96_12475 PF03755 YicC-like family, N-terminal region PN96_12510 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PN96_12515 PF00528 Binding-protein-dependent transport system inner membrane component PN96_12515 PF12911 N-terminal TM domain of oligopeptide transport permease C PN96_12520 PF00528 Binding-protein-dependent transport system inner membrane component PN96_12525 PF00593 TonB dependent receptor PN96_12525 PF07715 TonB-dependent Receptor Plug Domain PN96_12540 PF01618 MotA/TolQ/ExbB proton channel family PN96_12545 PF02472 Biopolymer transport protein ExbD/TolR PN96_12560 PF00625 Guanylate kinase PN96_12565 PF01192 RNA polymerase Rpb6 PN96_12570 PF04607 Region found in RelA / SpoT proteins PN96_12570 PF02824 TGS domain PN96_12570 PF13291 ACT domain PN96_12575 PF12105 SpoU, rRNA methylase, C-terminal PN96_12575 PF00588 SpoU rRNA Methylase family PN96_12580 PF00270 DEAD/DEAH box helicase PN96_12580 PF00271 Helicase conserved C-terminal domain PN96_12580 PF17191 RecG wedge domain PN96_12585 PF00860 Permease family PN96_12590 PF00672 HAMP domain PN96_12590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PN96_12590 PF00512 His Kinase A (phospho-acceptor) domain PN96_12595 PF00072 Response regulator receiver domain PN96_12595 PF00486 Transcriptional regulatory protein, C terminal PN96_12605 PF01272 Transcription elongation factor, GreA/GreB, C-term PN96_12605 PF03449 Transcription elongation factor, N-terminal PN96_12615 PF17674 HHH domain PN96_12615 PF09371 Tex-like protein N-terminal domain PN96_12615 PF16921 Tex protein YqgF-like domain PN96_12615 PF00575 S1 RNA binding domain PN96_12625 PF00561 alpha/beta hydrolase fold PN96_12630 PF00156 Phosphoribosyl transferase domain PN96_12635 PF01106 NifU-like domain PN96_12635 PF01521 Iron-sulphur cluster biosynthesis PN96_12640 PF00293 NUDIX domain PN96_12645 PF00459 Inositol monophosphatase family PN96_12650 PF01203 Type II secretion system (T2SS), protein N PN96_12655 PF04612 Type II secretion system (T2SS), protein M PN96_12660 PF05134 Type II secretion system (T2SS), protein L PN96_12660 PF12693 GspL periplasmic domain PN96_12665 PF03934 Type II secretion system (T2SS), protein K PN96_12670 PF07963 Prokaryotic N-terminal methylation motif PN96_12670 PF11612 Type II secretion system (T2SS), protein J PN96_12675 PF07963 Prokaryotic N-terminal methylation motif PN96_12675 PF02501 Type II secretion system (T2SS), protein I PN96_12680 PF12019 Type II transport protein GspH PN96_12685 PF08334 Type II secretion system (T2SS), protein G PN96_12685 PF07963 Prokaryotic N-terminal methylation motif PN96_12690 PF00482 Type II secretion system (T2SS), protein F PN96_12695 PF00437 Type II/IV secretion system protein PN96_12700 PF00263 Bacterial type II and III secretion system protein PN96_12700 PF03958 Bacterial type II/III secretion system short domain PN96_12705 PF11356 Type II secretion system protein C PN96_12710 PF01479 S4 domain PN96_12715 PF01430 Hsp33 protein PN96_12720 PF01293 Phosphoenolpyruvate carboxykinase PN96_12730 PF00583 Acetyltransferase (GNAT) family PN96_12730 PF09500 Putative thioesterase (yiiD_Cterm) PN96_12735 PF02580 D-Tyr-tRNA(Tyr) deacylase PN96_12740 PF03631 Virulence factor BrkB PN96_12760 PF00120 Glutamine synthetase, catalytic domain PN96_12760 PF03951 Glutamine synthetase, beta-Grasp domain PN96_12770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PN96_12770 PF00989 PAS fold PN96_12770 PF00512 His Kinase A (phospho-acceptor) domain PN96_12775 PF00158 Sigma-54 interaction domain PN96_12775 PF00072 Response regulator receiver domain PN96_12775 PF02954 Bacterial regulatory protein, Fis family PN96_12780 PF00990 Diguanylate cyclase, GGDEF domain PN96_12780 PF03707 Bacterial signalling protein N terminal repeat PN96_12780 PF00563 EAL domain PN96_12785 PF00962 Adenosine/AMP deaminase PN96_12790 PF06969 HemN C-terminal domain PN96_12790 PF04055 Radical SAM superfamily PN96_12795 PF10675 Protein of unknown function (DUF2489) PN96_12800 PF04220 Der GTPase activator (YihI) PN96_12815 PF00034 Cytochrome c PN96_12820 PF01926 50S ribosome-binding GTPase PN96_12825 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain PN96_12825 PF00476 DNA polymerase family A PN96_12825 PF01612 3'-5' exonuclease PN96_12825 PF01367 5'-3' exonuclease, C-terminal SAM fold PN96_12840 PF00490 Delta-aminolevulinic acid dehydratase PN96_12845 PF01026 TatD related DNase PN96_12850 PF03471 Transporter associated domain PN96_12850 PF00999 Sodium/hydrogen exchanger family PN96_12850 PF02080 TrkA-C domain PN96_12855 PF00902 Sec-independent protein translocase protein (TatC) PN96_12860 PF02416 mttA/Hcf106 family PN96_12865 PF02416 mttA/Hcf106 family PN96_12870 PF03109 ABC1 family PN96_12875 PF02036 SCP-2 sterol transfer family PN96_12880 PF01209 ubiE/COQ5 methyltransferase family PN96_12885 PF02646 RmuC family PN96_12895 PF03707 Bacterial signalling protein N terminal repeat PN96_12895 PF00990 Diguanylate cyclase, GGDEF domain PN96_12895 PF00563 EAL domain PN96_12905 PF00005 ABC transporter PN96_12905 PF00664 ABC transporter transmembrane region PN96_12910 PF00005 ABC transporter PN96_12910 PF00664 ABC transporter transmembrane region PN96_12920 PF01243 Pyridoxamine 5'-phosphate oxidase PN96_12955 PF00437 Type II/IV secretion system protein PN96_12970 PF00263 Bacterial type II and III secretion system protein PN96_12970 PF13629 Pilus formation protein N terminal region PN96_12970 PF04972 BON domain PN96_13005 PF10625 Universal stress protein B (UspB) PN96_13010 PF00210 Ferritin-like domain PN96_13015 PF00582 Universal stress protein family PN96_13020 PF00892 EamA-like transporter family PN96_13030 PF04445 Putative SAM-dependent methyltransferase PN96_13035 PF01037 Lrp/AsnC ligand binding domain PN96_13040 PF01432 Peptidase family M3 PN96_13045 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ PN96_13050 PF07992 Pyridine nucleotide-disulphide oxidoreductase PN96_13050 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PN96_13055 PF06228 Haem utilisation ChuX/HutX PN96_13060 PF01081 KDPG and KHG aldolase PN96_13065 PF02447 GntP family permease PN96_13070 PF01202 Shikimate kinase PN96_13075 PF00920 Dehydratase family PN96_13080 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family PN96_13080 PF00356 Bacterial regulatory proteins, lacI family PN96_13090 PF00528 Binding-protein-dependent transport system inner membrane component PN96_13090 PF12911 N-terminal TM domain of oligopeptide transport permease C PN96_13100 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PN96_13105 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PN96_13105 PF00005 ABC transporter PN96_13140 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PN96_13145 PF13361 UvrD-like helicase C-terminal domain PN96_13145 PF00580 UvrD/REP helicase N-terminal domain PN96_13150 PF00440 Bacterial regulatory proteins, tetR family PN96_13155 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PN96_13160 PF00873 AcrB/AcrD/AcrF family PN96_13165 PF04380 Membrane fusogenic activity PN96_13170 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain PN96_13170 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain PN96_13175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_13175 PF03466 LysR substrate binding domain PN96_13180 PF00072 Response regulator receiver domain PN96_13180 PF00486 Transcriptional regulatory protein, C terminal PN96_13185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PN96_13185 PF00512 His Kinase A (phospho-acceptor) domain PN96_13190 PF00367 phosphotransferase system, EIIB PN96_13190 PF02378 Phosphotransferase system, EIIC PN96_13225 PF12724 Flavodoxin domain PN96_13230 PF02386 Cation transport protein PN96_13235 PF09186 Domain of unknown function (DUF1949) PN96_13235 PF01205 Uncharacterized protein family UPF0029 PN96_13240 PF00378 Enoyl-CoA hydratase/isomerase PN96_13240 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PN96_13240 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PN96_13245 PF00108 Thiolase, N-terminal domain PN96_13245 PF02803 Thiolase, C-terminal domain PN96_13250 PF00107 Zinc-binding dehydrogenase PN96_13250 PF08240 Alcohol dehydrogenase GroES-like domain PN96_13255 PF03466 LysR substrate binding domain PN96_13255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_13265 PF01206 Sulfurtransferase TusA PN96_13275 PF01169 Uncharacterized protein family UPF0016 PN96_13280 PF02091 Glycyl-tRNA synthetase alpha subunit PN96_13285 PF02092 Glycyl-tRNA synthetase beta subunit PN96_13285 PF05746 DALR anticodon binding domain PN96_13290 PF00128 Alpha amylase, catalytic domain PN96_13295 PF00155 Aminotransferase class I and II PN96_13300 PF00011 Hsp20/alpha crystallin family PN96_13305 PF01751 Toprim domain PN96_13305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PN96_13305 PF00204 DNA gyrase B PN96_13305 PF18053 DNA gyrase B subunit insert domain PN96_13305 PF00986 DNA gyrase B subunit, carboxyl terminus PN96_13310 PF02463 RecF/RecN/SMC N terminal domain PN96_13315 PF00712 DNA polymerase III beta subunit, N-terminal domain PN96_13315 PF02767 DNA polymerase III beta subunit, central domain PN96_13315 PF02768 DNA polymerase III beta subunit, C-terminal domain PN96_13320 PF08299 Bacterial dnaA protein helix-turn-helix PN96_13320 PF11638 DnaA N-terminal domain PN96_13320 PF00308 Bacterial dnaA protein PN96_13325 PF00497 Bacterial extracellular solute-binding proteins, family 3 PN96_13330 PF00528 Binding-protein-dependent transport system inner membrane component PN96_13335 PF00005 ABC transporter PN96_13340 PF00468 Ribosomal protein L34 PN96_13345 PF00825 Ribonuclease P PN96_13350 PF02096 60Kd inner membrane protein PN96_13350 PF14849 YidC periplasmic domain PN96_13355 PF12631 MnmE helical domain PN96_13355 PF01926 50S ribosome-binding GTPase PN96_13355 PF10396 GTP-binding protein TrmE N-terminus PN96_13360 PF00258 Flavodoxin PN96_13365 PF13932 GidA associated domain PN96_13365 PF01134 Glucose inhibited division protein A PN96_13370 PF02527 rRNA small subunit methyltransferase G PN96_13375 PF13614 AAA domain PN96_13380 PF17762 HTH domain found in ParB protein PN96_13380 PF02195 ParB-like nuclease domain PN96_13385 PF03899 ATP synthase I chain PN96_13390 PF00119 ATP synthase A chain PN96_13395 PF00137 ATP synthase subunit C PN96_13400 PF00430 ATP synthase B/B' CF(0) PN96_13405 PF00213 ATP synthase delta (OSCP) subunit PN96_13410 PF02874 ATP synthase alpha/beta family, beta-barrel domain PN96_13410 PF00306 ATP synthase alpha/beta chain, C terminal domain PN96_13410 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PN96_13415 PF00231 ATP synthase PN96_13420 PF02874 ATP synthase alpha/beta family, beta-barrel domain PN96_13420 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PN96_13425 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain PN96_13425 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain PN96_13430 PF12804 MobA-like NTP transferase domain PN96_13430 PF00132 Bacterial transferase hexapeptide (six repeats) PN96_13435 PF00528 Binding-protein-dependent transport system inner membrane component PN96_13440 PF00497 Bacterial extracellular solute-binding proteins, family 3 PN96_13445 PF07690 Major Facilitator Superfamily PN96_13450 PF03466 LysR substrate binding domain PN96_13450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_13455 PF00585 C-terminal regulatory domain of Threonine dehydratase PN96_13455 PF00291 Pyridoxal-phosphate dependent enzyme PN96_13460 PF00920 Dehydratase family PN96_13470 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PN96_13470 PF00205 Thiamine pyrophosphate enzyme, central domain PN96_13470 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PN96_13475 PF01078 Magnesium chelatase, subunit ChlI PN96_13475 PF13335 Magnesium chelatase, subunit ChlI C-terminal PN96_13485 PF01553 Acyltransferase PN96_13490 PF01323 DSBA-like thioredoxin domain PN96_13495 PF01636 Phosphotransferase enzyme family PN96_13500 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase PN96_13500 PF12801 4Fe-4S binding domain PN96_13500 PF13746 4Fe-4S dicluster domain PN96_13505 PF06288 Protein of unknown function (DUF1040) PN96_13510 PF07070 SpoOM protein PN96_13515 PF03006 Haemolysin-III related PN96_13525 PF02386 Cation transport protein PN96_13530 PF02080 TrkA-C domain PN96_13530 PF02254 TrkA-N domain PN96_13535 PF01029 NusB family PN96_13535 PF01189 16S rRNA methyltransferase RsmB/F PN96_13540 PF02911 Formyl transferase, C-terminal domain PN96_13540 PF00551 Formyl transferase PN96_13545 PF01327 Polypeptide deformylase PN96_13555 PF02481 DNA recombination-mediator protein A PN96_13555 PF17782 DprA winged helix domain PN96_13560 PF04361 Protein of unknown function (DUF494) PN96_13565 PF01396 Topoisomerase DNA binding C4 zinc finger PN96_13570 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain PN96_13570 PF02222 ATP-grasp domain PN96_13575 PF00731 AIR carboxylase PN96_13580 PF01300 Telomere recombination PN96_13585 PF01218 Coproporphyrinogen III oxidase PN96_13590 PF18317 Shikimate 5'-dehydrogenase C-terminal domain PN96_13590 PF01488 Shikimate / quinate 5-dehydrogenase PN96_13590 PF08501 Shikimate dehydrogenase substrate binding domain PN96_13600 PF00132 Bacterial transferase hexapeptide (six repeats) PN96_13650 PF07732 Multicopper oxidase PN96_13650 PF07731 Multicopper oxidase PN96_13650 PF00394 Multicopper oxidase PN96_13655 PF02537 CrcB-like protein, Camphor Resistance (CrcB) PN96_13660 PF13667 ThiC-associated domain PN96_13660 PF01964 Radical SAM ThiC family PN96_13665 PF02581 Thiamine monophosphate synthase PN96_13670 PF00899 ThiF family PN96_13675 PF02597 ThiS family PN96_13680 PF05690 Thiazole biosynthesis protein ThiG PN96_13685 PF04055 Radical SAM superfamily PN96_13685 PF06968 Biotin and Thiamin Synthesis associated domain PN96_13690 PF00557 Metallopeptidase family M24 PN96_13690 PF01321 Creatinase/Prolidase N-terminal domain PN96_13690 PF00557 Metallopeptidase family M24 PN96_13690 PF01321 Creatinase/Prolidase N-terminal domain PN96_13695 PF03466 LysR substrate binding domain PN96_13695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_13700 PF07690 Major Facilitator Superfamily PN96_13720 PF05114 Protein of unknown function (DUF692) PN96_13730 PF13361 UvrD-like helicase C-terminal domain PN96_13730 PF00580 UvrD/REP helicase N-terminal domain PN96_13740 PF01810 LysE type translocator PN96_13750 PF00892 EamA-like transporter family PN96_13755 PF09382 RQC domain PN96_13755 PF16124 RecQ zinc-binding PN96_13755 PF00570 HRDC domain PN96_13755 PF00271 Helicase conserved C-terminal domain PN96_13755 PF00270 DEAD/DEAH box helicase PN96_13765 PF02592 Putative vitamin uptake transporter PN96_13770 PF02541 Ppx/GppA phosphatase family PN96_13775 PF00270 DEAD/DEAH box helicase PN96_13775 PF00271 Helicase conserved C-terminal domain PN96_13780 PF00085 Thioredoxin PN96_13785 PF07497 Rho termination factor, RNA-binding domain PN96_13785 PF07498 Rho termination factor, N-terminal domain PN96_13785 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PN96_13795 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase PN96_13805 PF00175 Oxidoreductase NAD-binding domain PN96_13850 PF07219 HemY protein N-terminus PN96_13855 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase PN96_13860 PF02602 Uroporphyrinogen-III synthase HemD PN96_13865 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain PN96_13865 PF03900 Porphobilinogen deaminase, C-terminal domain PN96_13870 PF01295 Adenylate cyclase, class-I PN96_13870 PF12633 Adenylate cyclase NT domain PN96_13875 PF01491 Frataxin-like domain PN96_13880 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain PN96_13880 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain PN96_13885 PF01678 Diaminopimelate epimerase PN96_13895 PF02899 Phage integrase, N-terminal SAM-like domain PN96_13895 PF00589 Phage integrase family PN96_13900 PF13419 Haloacid dehalogenase-like hydrolase PN96_13925 PF12146 Serine aminopeptidase, S33 PN96_13930 PF01810 LysE type translocator PN96_13935 PF08668 HDOD domain PN96_13935 PF00563 EAL domain PN96_13940 PF01022 Bacterial regulatory protein, arsR family PN96_13945 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PN96_13945 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PN96_13995 PF00448 SRP54-type protein, GTPase domain PN96_13995 PF02881 SRP54-type protein, helical bundle domain PN96_14000 PF00005 ABC transporter PN96_14005 PF18075 FtsX extracellular domain PN96_14010 PF04542 Sigma-70 region 2 PN96_14010 PF00140 Sigma-70 factor, region 1.2 PN96_14010 PF04545 Sigma-70, region 4 PN96_14015 PF00581 Rhodanese-like domain PN96_14020 PF01694 Rhomboid family PN96_14020 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease PN96_14025 PF03748 Flagellar basal body-associated protein FliL PN96_14030 PF04345 Chorismate lyase PN96_14035 PF01040 UbiA prenyltransferase family PN96_14040 PF01553 Acyltransferase PN96_14045 PF00717 Peptidase S24-like PN96_14045 PF01726 LexA DNA binding domain PN96_14050 PF04072 Leucine carboxyl methyltransferase PN96_14055 PF01554 MatE PN96_14060 PF07992 Pyridine nucleotide-disulphide oxidoreductase PN96_14060 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PN96_14065 PF00440 Bacterial regulatory proteins, tetR family PN96_14075 PF05958 tRNA (Uracil-5-)-methyltransferase PN96_14080 PF00593 TonB dependent receptor PN96_14080 PF07715 TonB-dependent Receptor Plug Domain PN96_14090 PF01177 Asp/Glu/Hydantoin racemase PN96_14150 PF13358 DDE superfamily endonuclease PN96_14180 PF02954 Bacterial regulatory protein, Fis family PN96_14185 PF01207 Dihydrouridine synthase (Dus) PN96_14195 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PN96_14195 PF02785 Biotin carboxylase C-terminal domain PN96_14195 PF00289 Biotin carboxylase, N-terminal domain PN96_14200 PF00364 Biotin-requiring enzyme PN96_14205 PF01220 Dehydroquinase class II PN96_14210 PF16177 Acetyl-coenzyme A synthetase N-terminus PN96_14210 PF13193 AMP-binding enzyme C-terminal domain PN96_14210 PF00501 AMP-binding enzyme PN96_14225 PF12832 MFS_1 like family PN96_14230 PF01627 Hpt domain PN96_14230 PF00672 HAMP domain PN96_14230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PN96_14230 PF00512 His Kinase A (phospho-acceptor) domain PN96_14230 PF00072 Response regulator receiver domain PN96_14235 PF10415 Fumarase C C-terminus PN96_14235 PF00206 Lyase PN96_14245 PF00474 Sodium:solute symporter family PN96_14255 PF02080 TrkA-C domain PN96_14255 PF00999 Sodium/hydrogen exchanger family PN96_14255 PF03471 Transporter associated domain PN96_14260 PF00072 Response regulator receiver domain PN96_14260 PF00196 Bacterial regulatory proteins, luxR family PN96_14265 PF02683 Cytochrome C biogenesis protein transmembrane region PN96_14265 PF11412 Disulphide bond corrector protein DsbC PN96_14270 PF03605 Anaerobic c4-dicarboxylate membrane transporter PN96_14275 PF00206 Lyase PN96_14275 PF10415 Fumarase C C-terminus PN96_14280 PF04186 FxsA cytoplasmic membrane protein PN96_14285 PF00588 SpoU rRNA Methylase family PN96_14290 PF00512 His Kinase A (phospho-acceptor) domain PN96_14290 PF00672 HAMP domain PN96_14290 PF16527 Two-component sensor protein CpxA, periplasmic domain PN96_14290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PN96_14295 PF00486 Transcriptional regulatory protein, C terminal PN96_14295 PF00072 Response regulator receiver domain PN96_14300 PF07813 LTXXQ motif family protein PN96_14305 PF01545 Cation efflux family PN96_14305 PF16916 Dimerisation domain of Zinc Transporter PN96_14310 PF00365 Phosphofructokinase PN96_14315 PF01554 MatE PN96_14320 PF00166 Chaperonin 10 Kd subunit PN96_14325 PF00118 TCP-1/cpn60 chaperonin family PN96_14335 PF02796 Helix-turn-helix domain of resolvase PN96_14335 PF00239 Resolvase, N terminal domain PN96_14350 PF02308 MgtC family PN96_14355 PF04055 Radical SAM superfamily PN96_14360 PF08207 Elongation factor P (EF-P) KOW-like domain PN96_14360 PF01132 Elongation factor P (EF-P) OB domain PN96_14360 PF09285 Elongation factor P, C-terminal PN96_14370 PF02313 Fumarate reductase subunit D PN96_14375 PF02300 Fumarate reductase subunit C PN96_14380 PF13085 2Fe-2S iron-sulfur cluster binding domain PN96_14380 PF13183 4Fe-4S dicluster domain PN96_14385 PF00890 FAD binding domain PN96_14385 PF02910 Fumarate reductase flavoprotein C-term PN96_14390 PF00152 tRNA synthetases class II (D, K and N) PN96_14400 PF00440 Bacterial regulatory proteins, tetR family PN96_14400 PF08360 QacR-like protein, C-terminal region PN96_14410 PF01551 Peptidase family M23 PN96_14415 PF06426 Serine acetyltransferase, N-terminal PN96_14415 PF00132 Bacterial transferase hexapeptide (six repeats) PN96_14420 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus PN96_14420 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus PN96_14425 PF02556 Preprotein translocase subunit SecB PN96_14430 PF00581 Rhodanese-like domain PN96_14435 PF01676 Metalloenzyme superfamily PN96_14435 PF06415 BPG-independent PGAM N-terminus (iPGM_N) PN96_14445 PF00939 Sodium:sulfate symporter transmembrane region PN96_14450 PF02666 Phosphatidylserine decarboxylase PN96_14455 PF03193 RsgA GTPase PN96_14460 PF00929 Exonuclease PN96_14525 PF08331 Domain of unknown function (DUF1730) PN96_14530 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE PN96_14535 PF01520 N-acetylmuramoyl-L-alanine amidase PN96_14540 PF08676 MutL C terminal dimerisation domain PN96_14540 PF01119 DNA mismatch repair protein, C-terminal domain PN96_14550 PF17209 Hfq protein PN96_14555 PF01926 50S ribosome-binding GTPase PN96_14555 PF13167 GTP-binding GTPase N-terminal PN96_14555 PF16360 GTP-binding GTPase Middle Region PN96_14560 PF12221 Bacterial membrane protein N terminal PN96_14560 PF01145 SPFH domain / Band 7 family PN96_14565 PF01145 SPFH domain / Band 7 family PN96_14570 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) PN96_14575 PF00709 Adenylosuccinate synthetase PN96_14580 PF08238 Sel1 repeat PN96_14585 PF00970 Oxidoreductase FAD-binding domain PN96_14585 PF00042 Globin PN96_14585 PF00175 Oxidoreductase NAD-binding domain PN96_14590 PF02082 Transcriptional regulator PN96_14595 PF17876 Cold shock domain PN96_14595 PF00575 S1 RNA binding domain PN96_14595 PF00773 RNB domain PN96_14595 PF08461 Ribonuclease R winged-helix domain PN96_14595 PF08206 Ribonuclease B OB domain PN96_14600 PF00588 SpoU rRNA Methylase family PN96_14600 PF08032 RNA 2'-O ribose methyltransferase substrate binding PN96_14605 PF13419 Haloacid dehalogenase-like hydrolase PN96_14610 PF00579 tRNA synthetases class I (W and Y) PN96_14615 PF00117 Glutamine amidotransferase class-I PN96_14620 PF00202 Aminotransferase class-III PN96_14625 PF04958 Arginine N-succinyltransferase beta subunit PN96_14630 PF00171 Aldehyde dehydrogenase family PN96_14640 PF00027 Cyclic nucleotide-binding domain PN96_14640 PF13545 Crp-like helix-turn-helix domain PN96_14645 PF00485 Phosphoribulokinase / Uridine kinase family PN96_14650 PF06794 Uncharacterised protein family (UPF0270) PN96_14655 PF00561 alpha/beta hydrolase fold PN96_14665 PF00005 ABC transporter PN96_14665 PF12848 ABC transporter PN96_14670 PF02525 Flavodoxin-like fold PN96_14675 PF02254 TrkA-N domain PN96_14675 PF00999 Sodium/hydrogen exchanger family PN96_14685 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PN96_14690 PF01112 Asparaginase PN96_14695 PF04102 SlyX PN96_14705 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase PN96_14705 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PN96_14710 PF13309 HTH domain PN96_14710 PF08348 YheO-like PAS domain PN96_14715 PF02635 DsrE/DsrF-like family PN96_14720 PF02635 DsrE/DsrF-like family PN96_14725 PF04077 DsrH like protein PN96_14730 PF00164 Ribosomal protein S12/S23 PN96_14735 PF00177 Ribosomal protein S7p/S5e PN96_14740 PF00679 Elongation factor G C-terminus PN96_14740 PF03144 Elongation factor Tu domain 2 PN96_14740 PF00009 Elongation factor Tu GTP binding domain PN96_14740 PF14492 Elongation Factor G, domain II PN96_14740 PF03764 Elongation factor G, domain IV PN96_14745 PF03143 Elongation factor Tu C-terminal domain PN96_14745 PF03144 Elongation factor Tu domain 2 PN96_14745 PF00009 Elongation factor Tu GTP binding domain PN96_14750 PF00210 Ferritin-like domain PN96_14755 PF00390 Malic enzyme, N-terminal domain PN96_14755 PF03949 Malic enzyme, NAD binding domain PN96_14760 PF01340 Met Apo-repressor, MetJ PN96_14765 PF01053 Cys/Met metabolism PLP-dependent enzyme PN96_14770 PF03447 Homoserine dehydrogenase, NAD binding domain PN96_14770 PF00742 Homoserine dehydrogenase PN96_14770 PF00696 Amino acid kinase family PN96_14775 PF02219 Methylenetetrahydrofolate reductase PN96_14785 PF00311 Phosphoenolpyruvate carboxylase PN96_14790 PF01546 Peptidase family M20/M25/M40 PN96_14790 PF07687 Peptidase dimerisation domain PN96_14795 PF01118 Semialdehyde dehydrogenase, NAD binding domain PN96_14795 PF02774 Semialdehyde dehydrogenase, dimerisation domain PN96_14800 PF00696 Amino acid kinase family PN96_14805 PF00764 Arginosuccinate synthase PN96_14810 PF00583 Acetyltransferase (GNAT) family PN96_14810 PF14698 Argininosuccinate lyase C-terminal PN96_14810 PF00206 Lyase PN96_14815 PF08534 Redoxin PN96_14815 PF00462 Glutaredoxin PN96_14820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_14820 PF03466 LysR substrate binding domain PN96_14825 PF17092 Penicillin-binding protein OB-like domain PN96_14825 PF00912 Transglycosylase PN96_14825 PF00905 Penicillin binding protein transpeptidase domain PN96_14850 PF11741 AMIN domain PN96_14850 PF00263 Bacterial type II and III secretion system protein PN96_14850 PF07660 Secretin and TonB N terminus short domain PN96_14850 PF03958 Bacterial type II/III secretion system short domain PN96_14855 PF01202 Shikimate kinase PN96_14860 PF01761 3-dehydroquinate synthase PN96_14870 PF02086 D12 class N6 adenine-specific DNA methyltransferase PN96_14875 PF00834 Ribulose-phosphate 3 epimerase family PN96_14880 PF01250 Ribosomal protein S6 PN96_14885 PF00436 Single-strand binding protein family PN96_14890 PF01084 Ribosomal protein S18 PN96_14895 PF03948 Ribosomal protein L9, C-terminal domain PN96_14895 PF01281 Ribosomal protein L9, N-terminal domain PN96_14905 PF00772 DnaB-like helicase N terminal domain PN96_14905 PF03796 DnaB-like helicase C terminal domain PN96_14910 PF00842 Alanine racemase, C-terminal domain PN96_14910 PF01168 Alanine racemase, N-terminal domain PN96_14915 PF01894 Uncharacterised protein family UPF0047 PN96_14920 PF00342 Phosphoglucose isomerase PN96_14930 PF01475 Ferric uptake regulator family PN96_14935 PF01207 Dihydrouridine synthase (Dus) PN96_14955 PF00258 Flavodoxin PN96_14955 PF00175 Oxidoreductase NAD-binding domain PN96_14955 PF00667 FAD binding domain PN96_14960 PF01077 Nitrite and sulphite reductase 4Fe-4S domain PN96_14960 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain PN96_14965 PF01507 Phosphoadenosine phosphosulfate reductase family PN96_14975 PF08402 TOBE domain PN96_14975 PF00005 ABC transporter PN96_14995 PF13807 G-rich domain on putative tyrosine kinase PN96_14995 PF02706 Chain length determinant protein PN96_14995 PF13614 AAA domain PN96_15005 PF00534 Glycosyl transferases group 1 PN96_15005 PF13439 Glycosyltransferase Family 4 PN96_15020 PF13439 Glycosyltransferase Family 4 PN96_15020 PF00534 Glycosyl transferases group 1 PN96_15040 PF00440 Bacterial regulatory proteins, tetR family PN96_15040 PF16925 Tetracyclin repressor-like, C-terminal domain PN96_15045 PF00107 Zinc-binding dehydrogenase PN96_15045 PF16884 N-terminal domain of oxidoreductase PN96_15050 PF13417 Glutathione S-transferase, N-terminal domain PN96_15055 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PN96_15055 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase PN96_15060 PF13419 Haloacid dehalogenase-like hydrolase PN96_15065 PF00127 Copper binding proteins, plastocyanin/azurin family PN96_15075 PF01266 FAD dependent oxidoreductase PN96_15080 PF07992 Pyridine nucleotide-disulphide oxidoreductase PN96_15080 PF18113 Rubredoxin binding C-terminal domain PN96_15090 PF00848 Ring hydroxylating alpha subunit (catalytic domain) PN96_15090 PF00355 Rieske [2Fe-2S] domain PN96_15095 PF02028 BCCT, betaine/carnitine/choline family transporter PN96_15100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_15100 PF03466 LysR substrate binding domain PN96_15105 PF00664 ABC transporter transmembrane region PN96_15105 PF00005 ABC transporter PN96_15110 PF07715 TonB-dependent Receptor Plug Domain PN96_15110 PF00593 TonB dependent receptor PN96_15115 PF00005 ABC transporter PN96_15120 PF01497 Periplasmic binding protein PN96_15125 PF01032 FecCD transport family PN96_15135 PF00529 HlyD membrane-fusion protein of T1SS PN96_15135 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PN96_15140 PF00005 ABC transporter PN96_15140 PF00664 ABC transporter transmembrane region PN96_15150 PF00196 Bacterial regulatory proteins, luxR family PN96_15155 PF00196 Bacterial regulatory proteins, luxR family PN96_15165 PF07726 ATPase family associated with various cellular activities (AAA) PN96_15165 PF17863 AAA lid domain PN96_15170 PF01882 Protein of unknown function DUF58 PN96_15185 PF13519 von Willebrand factor type A domain PN96_15195 PF00005 ABC transporter PN96_15200 PF00528 Binding-protein-dependent transport system inner membrane component PN96_15205 PF00528 Binding-protein-dependent transport system inner membrane component PN96_15210 PF12849 PBP superfamily domain PN96_15215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PN96_15215 PF17200 Single Cache domain 2 PN96_15215 PF00672 HAMP domain PN96_15220 PF00271 Helicase conserved C-terminal domain PN96_15220 PF00270 DEAD/DEAH box helicase PN96_15230 PF03734 L,D-transpeptidase catalytic domain PN96_15230 PF01476 LysM domain PN96_15230 PF17969 L,D-transpeptidase C-terminal domain PN96_15235 PF03441 FAD binding domain of DNA photolyase PN96_15235 PF00875 DNA photolyase PN96_15240 PF13411 MerR HTH family regulatory protein PN96_15245 PF08349 Protein of unknown function (DUF1722) PN96_15250 PF01048 Phosphorylase superfamily PN96_15265 PF00990 Diguanylate cyclase, GGDEF domain PN96_15270 PF11742 Protein of unknown function (DUF3302) PN96_15275 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PN96_15275 PF00529 HlyD membrane-fusion protein of T1SS PN96_15280 PF07155 ECF-type riboflavin transporter, S component PN96_15290 PF12801 4Fe-4S binding domain PN96_15290 PF12837 4Fe-4S binding domain PN96_15295 PF12800 4Fe-4S binding domain PN96_15295 PF12838 4Fe-4S dicluster domain PN96_15300 PF00583 Acetyltransferase (GNAT) family PN96_15315 PF07238 PilZ domain PN96_15315 PF12945 Flagellar protein YcgR PN96_15320 PF05362 Lon protease (S16) C-terminal proteolytic domain PN96_15320 PF13654 AAA domain PN96_15330 PF00326 Prolyl oligopeptidase family PN96_15330 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain PN96_15335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_15335 PF03466 LysR substrate binding domain PN96_15340 PF02652 L-lactate permease PN96_15345 PF01070 FMN-dependent dehydrogenase PN96_15355 PF00924 Mechanosensitive ion channel PN96_15360 PF00194 Eukaryotic-type carbonic anhydrase PN96_15370 PF00313 'Cold-shock' DNA-binding domain PN96_15380 PF00107 Zinc-binding dehydrogenase PN96_15380 PF08240 Alcohol dehydrogenase GroES-like domain PN96_15385 PF00155 Aminotransferase class I and II PN96_15390 PF00990 Diguanylate cyclase, GGDEF domain PN96_15390 PF03707 Bacterial signalling protein N terminal repeat PN96_15390 PF13188 PAS domain PN96_15390 PF00563 EAL domain PN96_15405 PF00080 Copper/zinc superoxide dismutase (SODC) PN96_15410 PF13426 PAS domain PN96_15410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PN96_15410 PF00512 His Kinase A (phospho-acceptor) domain PN96_15410 PF00072 Response regulator receiver domain PN96_15410 PF08448 PAS fold PN96_15415 PF00072 Response regulator receiver domain PN96_15415 PF00486 Transcriptional regulatory protein, C terminal PN96_15430 PF03466 LysR substrate binding domain PN96_15430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_15435 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PN96_15460 PF00892 EamA-like transporter family PN96_15475 PF02321 Outer membrane efflux protein PN96_15485 PF13533 Biotin-lipoyl like PN96_15495 PF01594 AI-2E family transporter PN96_15500 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) PN96_15505 PF00970 Oxidoreductase FAD-binding domain PN96_15505 PF00175 Oxidoreductase NAD-binding domain PN96_15515 PF09905 DNA-binding protein VF530 PN96_15520 PF00768 D-alanyl-D-alanine carboxypeptidase PN96_15520 PF07943 Penicillin-binding protein 5, C-terminal domain PN96_15525 PF00561 alpha/beta hydrolase fold PN96_15540 PF01734 Patatin-like phospholipase PN96_15545 PF01914 MarC family integral membrane protein PN96_15550 PF00881 Nitroreductase family PN96_15560 PF00375 Sodium:dicarboxylate symporter family PN96_15565 PF06803 Protein of unknown function (DUF1232) PN96_15575 PF07670 Nucleoside recognition PN96_15580 PF07670 Nucleoside recognition PN96_15585 PF00128 Alpha amylase, catalytic domain PN96_15590 PF00912 Transglycosylase PN96_15595 PF02806 Alpha amylase, C-terminal all-beta domain PN96_15595 PF00128 Alpha amylase, catalytic domain PN96_15595 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) PN96_15600 PF02446 4-alpha-glucanotransferase PN96_15605 PF00343 Carbohydrate phosphorylase PN96_15610 PF00196 Bacterial regulatory proteins, luxR family PN96_15610 PF17874 MalT-like TPR region PN96_15625 PF02630 SCO1/SenC PN96_15630 PF00367 phosphotransferase system, EIIB PN96_15630 PF02378 Phosphotransferase system, EIIC PN96_15635 PF03193 RsgA GTPase PN96_15640 PF00375 Sodium:dicarboxylate symporter family PN96_15645 PF08543 Phosphomethylpyrimidine kinase PN96_15655 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) PN96_15655 PF17967 Pullulanase N2 domain PN96_15655 PF18494 Pullulanase Ins domain PN96_15655 PF03714 Bacterial pullanase-associated domain PN96_15655 PF11852 Domain of unknown function (DUF3372) PN96_15660 PF00128 Alpha amylase, catalytic domain PN96_15660 PF02903 Alpha amylase, N-terminal ig-like domain PN96_15670 PF07148 Maltose operon periplasmic protein precursor (MalM) PN96_15675 PF02264 LamB porin PN96_15680 PF00128 Alpha amylase, catalytic domain PN96_15680 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) PN96_15685 PF00356 Bacterial regulatory proteins, lacI family PN96_15690 PF00367 phosphotransferase system, EIIB PN96_15690 PF02378 Phosphotransferase system, EIIC PN96_15700 PF07690 Major Facilitator Superfamily PN96_15705 PF07715 TonB-dependent Receptor Plug Domain PN96_15705 PF00593 TonB dependent receptor PN96_15710 PF03466 LysR substrate binding domain PN96_15710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_15715 PF01497 Periplasmic binding protein PN96_15720 PF01032 FecCD transport family PN96_15725 PF01032 FecCD transport family PN96_15730 PF00005 ABC transporter PN96_15735 PF08360 QacR-like protein, C-terminal region PN96_15735 PF00440 Bacterial regulatory proteins, tetR family PN96_15745 PF13533 Biotin-lipoyl like PN96_15750 PF01212 Beta-eliminating lyase PN96_15755 PF03222 Tryptophan/tyrosine permease family PN96_15770 PF04320 Protein with unknown function (DUF469) PN96_15785 PF00893 Small Multidrug Resistance protein PN96_15790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_15790 PF03466 LysR substrate binding domain PN96_15800 PF00171 Aldehyde dehydrogenase family PN96_15805 PF00202 Aminotransferase class-III PN96_15810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_15810 PF03466 LysR substrate binding domain PN96_15815 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain PN96_15815 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain PN96_15820 PF03466 LysR substrate binding domain PN96_15820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_15825 PF06339 Ectoine synthase PN96_15830 PF00474 Sodium:solute symporter family PN96_15845 PF01266 FAD dependent oxidoreductase PN96_15850 PF01042 Endoribonuclease L-PSP PN96_15855 PF02423 Ornithine cyclodeaminase/mu-crystallin family PN96_15860 PF02311 AraC-like ligand binding domain PN96_15860 PF12833 Helix-turn-helix domain PN96_15890 PF08244 Glycosyl hydrolases family 32 C terminal PN96_15890 PF00251 Glycosyl hydrolases family 32 N-terminal domain PN96_15895 PF02435 Levansucrase/Invertase PN96_15900 PF00141 Peroxidase PN96_15910 PF05193 Peptidase M16 inactive domain PN96_15910 PF00675 Insulinase (Peptidase family M16) PN96_15915 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain PN96_15915 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain PN96_15915 PF02278 Polysaccharide lyase family 8, super-sandwich domain PN96_15920 PF09508 Lacto-N-biose phosphorylase N-terminal TIM barrel domain PN96_15920 PF17385 Lacto-N-biose phosphorylase central domain PN96_15920 PF17386 Lacto-N-biose phosphorylase C-terminal domain PN96_15925 PF07470 Glycosyl Hydrolase Family 88 PN96_15930 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain PN96_15930 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain PN96_15935 PF01370 NAD dependent epimerase/dehydratase family PN96_15940 PF00916 Sulfate permease family PN96_15940 PF01740 STAS domain PN96_15945 PF16353 Domain of unknown function(DUF4981) PN96_15945 PF02929 Beta galactosidase small chain PN96_15945 PF00703 Glycosyl hydrolases family 2 PN96_15945 PF02836 Glycosyl hydrolases family 2, TIM barrel domain PN96_15945 PF02837 Glycosyl hydrolases family 2, sugar binding domain PN96_15950 PF00480 ROK family PN96_15955 PF00672 HAMP domain PN96_15955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PN96_15955 PF12729 Four helix bundle sensory module for signal transduction PN96_15960 PF00005 ABC transporter PN96_15960 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PN96_15965 PF00528 Binding-protein-dependent transport system inner membrane component PN96_15965 PF12911 N-terminal TM domain of oligopeptide transport permease C PN96_15970 PF00528 Binding-protein-dependent transport system inner membrane component PN96_15975 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PN96_15985 PF04055 Radical SAM superfamily PN96_15985 PF13186 Iron-sulfur cluster-binding domain PN96_15990 PF00884 Sulfatase PN96_15995 PF00884 Sulfatase PN96_15995 PF16385 Domain of unknown function PN96_16000 PF01497 Periplasmic binding protein PN96_16005 PF00593 TonB dependent receptor PN96_16005 PF07660 Secretin and TonB N terminus short domain PN96_16005 PF07715 TonB-dependent Receptor Plug Domain PN96_16015 PF02653 Branched-chain amino acid transport system / permease component PN96_16020 PF00005 ABC transporter PN96_16025 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family PN96_16030 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PN96_16030 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PN96_16035 PF00596 Class II Aldolase and Adducin N-terminal domain PN96_16040 PF11762 L-arabinose isomerase C-terminal domain PN96_16040 PF02610 L-arabinose isomerase PN96_16045 PF02311 AraC-like ligand binding domain PN96_16045 PF12833 Helix-turn-helix domain PN96_16050 PF01263 Aldose 1-epimerase PN96_16055 PF04616 Glycosyl hydrolases family 43 PN96_16055 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain PN96_16070 PF00528 Binding-protein-dependent transport system inner membrane component PN96_16075 PF00005 ABC transporter PN96_16080 PF04069 Substrate binding domain of ABC-type glycine betaine transport system PN96_16085 PF00202 Aminotransferase class-III PN96_16090 PF00155 Aminotransferase class I and II PN96_16090 PF00392 Bacterial regulatory proteins, gntR family PN96_16100 PF00106 short chain dehydrogenase PN96_16105 PF00005 ABC transporter PN96_16125 PF02566 OsmC-like protein PN96_16130 PF01047 MarR family PN96_16135 PF10417 C-terminal domain of 1-Cys peroxiredoxin PN96_16135 PF00578 AhpC/TSA family PN96_16140 PF13192 Thioredoxin domain PN96_16140 PF07992 Pyridine nucleotide-disulphide oxidoreductase PN96_16145 PF00884 Sulfatase PN96_16160 PF01037 Lrp/AsnC ligand binding domain PN96_16170 PF00474 Sodium:solute symporter family PN96_16180 PF14850 DNA-binding domain of Proline dehydrogenase PN96_16180 PF18327 Proline utilization A proline dehydrogenase N-terminal domain PN96_16180 PF01619 Proline dehydrogenase PN96_16180 PF00171 Aldehyde dehydrogenase family PN96_16185 PF12833 Helix-turn-helix domain PN96_16200 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region PN96_16200 PF01243 Pyridoxamine 5'-phosphate oxidase PN96_16205 PF00512 His Kinase A (phospho-acceptor) domain PN96_16205 PF02743 Cache domain PN96_16205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PN96_16210 PF02954 Bacterial regulatory protein, Fis family PN96_16210 PF00072 Response regulator receiver domain PN96_16210 PF00158 Sigma-54 interaction domain PN96_16215 PF00529 HlyD membrane-fusion protein of T1SS PN96_16230 PF03412 Peptidase C39 family PN96_16230 PF00664 ABC transporter transmembrane region PN96_16230 PF00005 ABC transporter PN96_16245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PN96_16250 PF00246 Zinc carboxypeptidase PN96_16260 PF13718 GNAT acetyltransferase 2 PN96_16260 PF05127 Helicase PN96_16265 PF02195 ParB-like nuclease domain PN96_16265 PF08775 ParB family PN96_16270 PF18607 ParA helix turn helix domain PN96_16270 PF13614 AAA domain PN96_16285 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PN96_16285 PF00005 ABC transporter PN96_16290 PF00005 ABC transporter PN96_16290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PN96_16305 PF01709 Transcriptional regulator PN96_16315 PF00005 ABC transporter PN96_16320 PF12704 MacB-like periplasmic core domain PN96_16320 PF02687 FtsX-like permease family PN96_16335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PN96_16335 PF13492 GAF domain PN96_16335 PF07694 5TMR of 5TMR-LYT PN96_16335 PF06580 Histidine kinase PN96_16340 PF04397 LytTr DNA-binding domain PN96_16340 PF00072 Response regulator receiver domain PN96_16345 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PN96_16355 PF03616 Sodium/glutamate symporter PN96_16365 PF00005 ABC transporter PN96_16380 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase PN96_16395 PF03466 LysR substrate binding domain PN96_16395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_16400 PF02678 Pirin PN96_16400 PF17954 Quercetinase C-terminal cupin domain PN96_16405 PF07681 DoxX PN96_16415 PF00730 HhH-GPD superfamily base excision DNA repair protein PN96_16415 PF06029 AlkA N-terminal domain PN96_16420 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain PN96_16420 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain PN96_16425 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 PN96_16440 PF03600 Citrate transporter PN96_16460 PF08329 Chitinase A, N-terminal domain PN96_16460 PF00704 Glycosyl hydrolases family 18 PN96_16465 PF06865 Pyrimidine/purine nucleoside phosphorylase PN96_16475 PF00990 Diguanylate cyclase, GGDEF domain PN96_16475 PF00563 EAL domain PN96_16480 PF01554 MatE PN96_16485 PF00069 Protein kinase domain PN96_16485 PF03793 PASTA domain PN96_16490 PF00849 RNA pseudouridylate synthase PN96_16500 PF17152 Periplasmic sensor domain PN96_16500 PF00990 Diguanylate cyclase, GGDEF domain PN96_16510 PF00756 Putative esterase PN96_16515 PF08240 Alcohol dehydrogenase GroES-like domain PN96_16515 PF00107 Zinc-binding dehydrogenase PN96_16520 PF00596 Class II Aldolase and Adducin N-terminal domain PN96_16530 PF03466 LysR substrate binding domain PN96_16530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_16535 PF09339 IclR helix-turn-helix domain PN96_16535 PF01614 Bacterial transcriptional regulator PN96_16555 PF00294 pfkB family carbohydrate kinase PN96_16560 PF01081 KDPG and KHG aldolase PN96_16565 PF08021 Siderophore-interacting FAD-binding domain PN96_16565 PF04954 Siderophore-interacting protein PN96_16570 PF01810 LysE type translocator PN96_16575 PF01037 Lrp/AsnC ligand binding domain PN96_16590 PF03922 OmpW family PN96_16600 PF12706 Beta-lactamase superfamily domain PN96_16605 PF01661 Macro domain PN96_16610 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PN96_16635 PF17853 GGDEF-like domain PN96_16635 PF05651 Putative sugar diacid recognition PN96_16635 PF13556 PucR C-terminal helix-turn-helix domain PN96_16640 PF02447 GntP family permease PN96_16645 PF02595 Glycerate kinase family PN96_16660 PF03264 NapC/NirT cytochrome c family, N-terminal region PN96_16665 PF00384 Molybdopterin oxidoreductase PN96_16665 PF01568 Molydopterin dinucleotide binding domain PN96_16665 PF18364 Molybdopterin oxidoreductase N-terminal domain PN96_16675 PF02581 Thiamine monophosphate synthase PN96_16680 PF02110 Hydroxyethylthiazole kinase family PN96_16685 PF03070 TENA/THI-4/PQQC family PN96_16690 PF09084 NMT1/THI5 like PN96_16695 PF00528 Binding-protein-dependent transport system inner membrane component PN96_16700 PF00005 ABC transporter PN96_16705 PF08543 Phosphomethylpyrimidine kinase PN96_16710 PF01523 Putative modulator of DNA gyrase PN96_16715 PF01523 Putative modulator of DNA gyrase PN96_16720 PF04013 Putative SAM-dependent RNA methyltransferase PN96_16780 PF10928 Protein of unknown function (DUF2810) PN96_16785 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PN96_16785 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PN96_16795 PF03009 Glycerophosphoryl diester phosphodiesterase family PN96_16805 PF00072 Response regulator receiver domain PN96_16805 PF00486 Transcriptional regulatory protein, C terminal PN96_16810 PF00672 HAMP domain PN96_16810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PN96_16810 PF00512 His Kinase A (phospho-acceptor) domain PN96_16815 PF07715 TonB-dependent Receptor Plug Domain PN96_16815 PF00593 TonB dependent receptor PN96_16825 PF01618 MotA/TolQ/ExbB proton channel family PN96_16830 PF01618 MotA/TolQ/ExbB proton channel family PN96_16835 PF02472 Biopolymer transport protein ExbD/TolR PN96_16855 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain PN96_16855 PF00326 Prolyl oligopeptidase family PN96_16860 PF07690 Major Facilitator Superfamily PN96_16865 PF00491 Arginase family PN96_16870 PF17944 Arginine decarboxylase C-terminal helical extension PN96_16870 PF17810 Arginine decarboxylase helical bundle domain PN96_16870 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain PN96_16875 PF00753 Metallo-beta-lactamase superfamily PN96_16880 PF08443 RimK-like ATP-grasp domain PN96_16880 PF18030 RimK PreATP-grasp domain PN96_16885 PF18030 RimK PreATP-grasp domain PN96_16885 PF08443 RimK-like ATP-grasp domain PN96_16905 PF00990 Diguanylate cyclase, GGDEF domain PN96_16910 PF05525 Branched-chain amino acid transport protein PN96_16920 PF01266 FAD dependent oxidoreductase PN96_16935 PF07670 Nucleoside recognition PN96_16935 PF07662 Na+ dependent nucleoside transporter C-terminus PN96_16935 PF01773 Na+ dependent nucleoside transporter N-terminus PN96_16950 PF00990 Diguanylate cyclase, GGDEF domain PN96_16950 PF03707 Bacterial signalling protein N terminal repeat PN96_16950 PF00563 EAL domain PN96_16965 PF00990 Diguanylate cyclase, GGDEF domain PN96_16970 PF04244 Deoxyribodipyrimidine photo-lyase-related protein PN96_16980 PF01625 Peptide methionine sulfoxide reductase PN96_16980 PF01641 SelR domain PN96_16985 PF02566 OsmC-like protein PN96_16990 PF12464 Maltose acetyltransferase PN96_16990 PF14602 Hexapeptide repeat of succinyl-transferase PN96_16995 PF05656 Protein of unknown function (DUF805) PN96_17015 PF00005 ABC transporter PN96_17020 PF01979 Amidohydrolase family PN96_17030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_17030 PF03466 LysR substrate binding domain PN96_17035 PF13419 Haloacid dehalogenase-like hydrolase PN96_17050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PN96_17055 PF00005 ABC transporter PN96_17055 PF02687 FtsX-like permease family PN96_17055 PF12704 MacB-like periplasmic core domain PN96_17060 PF02321 Outer membrane efflux protein PN96_17065 PF00657 GDSL-like Lipase/Acylhydrolase PN96_17080 PF13419 Haloacid dehalogenase-like hydrolase PN96_17090 PF00266 Aminotransferase class-V PN96_17100 PF01047 MarR family PN96_17100 PF00583 Acetyltransferase (GNAT) family PN96_17105 PF00005 ABC transporter PN96_17110 PF00528 Binding-protein-dependent transport system inner membrane component PN96_17115 PF00392 Bacterial regulatory proteins, gntR family PN96_17115 PF07702 UTRA domain PN96_17125 PF01266 FAD dependent oxidoreductase PN96_17130 PF00246 Zinc carboxypeptidase PN96_17130 PF18027 Cytosolic carboxypeptidase N-terminal domain PN96_17135 PF01389 OmpA-like transmembrane domain PN96_17135 PF00691 OmpA family PN96_17140 PF03466 LysR substrate binding domain PN96_17140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_17145 PF03313 Serine dehydratase alpha chain PN96_17145 PF03315 Serine dehydratase beta chain PN96_17165 PF00133 tRNA synthetases class I (I, L, M and V) PN96_17165 PF08264 Anticodon-binding domain of tRNA PN96_17180 PF01070 FMN-dependent dehydrogenase PN96_17205 PF00581 Rhodanese-like domain PN96_17210 PF00166 Chaperonin 10 Kd subunit PN96_17215 PF00118 TCP-1/cpn60 chaperonin family PN96_17220 PF01810 LysE type translocator PN96_17225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_17225 PF03466 LysR substrate binding domain PN96_17235 PF12833 Helix-turn-helix domain PN96_17240 PF06751 Ethanolamine ammonia lyase large subunit (EutB) PN96_17245 PF05985 Ethanolamine ammonia-lyase light chain (EutC) PN96_17250 PF13520 Amino acid permease PN96_17255 PF01625 Peptide methionine sulfoxide reductase PN96_17255 PF01641 SelR domain PN96_17265 PF00857 Isochorismatase family PN96_17275 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain PN96_17275 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family PN96_17290 PF00892 EamA-like transporter family PN96_17295 PF03466 LysR substrate binding domain PN96_17295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_17300 PF17185 NlpE C-terminal OB domain PN96_17300 PF04170 NlpE N-terminal domain PN96_17305 PF02001 Protein of unknown function DUF134 PN96_17325 PF03764 Elongation factor G, domain IV PN96_17325 PF00679 Elongation factor G C-terminus PN96_17325 PF14492 Elongation Factor G, domain II PN96_17325 PF00009 Elongation factor Tu GTP binding domain PN96_17325 PF03144 Elongation factor Tu domain 2 PN96_17330 PF02264 LamB porin PN96_17330 PF11471 Maltoporin periplasmic N-terminal extension PN96_17340 PF00376 MerR family regulatory protein PN96_17340 PF09278 MerR, DNA binding PN96_17360 PF13091 PLD-like domain PN96_17365 PF00529 HlyD membrane-fusion protein of T1SS PN96_17365 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PN96_17370 PF00873 AcrB/AcrD/AcrF family PN96_17385 PF00005 ABC transporter PN96_17385 PF08402 TOBE domain PN96_17410 PF07702 UTRA domain PN96_17410 PF00392 Bacterial regulatory proteins, gntR family PN96_17415 PF02028 BCCT, betaine/carnitine/choline family transporter PN96_17430 PF00873 AcrB/AcrD/AcrF family PN96_17440 PF03466 LysR substrate binding domain PN96_17440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_17445 PF13416 Bacterial extracellular solute-binding protein PN96_17450 PF00579 tRNA synthetases class I (W and Y) PN96_17455 PF00196 Bacterial regulatory proteins, luxR family PN96_17465 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PN96_17465 PF00391 PEP-utilising enzyme, mobile domain PN96_17465 PF02896 PEP-utilising enzyme, TIM barrel domain PN96_17470 PF03618 Kinase/pyrophosphorylase PN96_17480 PF03466 LysR substrate binding domain PN96_17480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_17490 PF00501 AMP-binding enzyme PN96_17490 PF13193 AMP-binding enzyme C-terminal domain PN96_17495 PF00512 His Kinase A (phospho-acceptor) domain PN96_17495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PN96_17495 PF00989 PAS fold PN96_17500 PF00196 Bacterial regulatory proteins, luxR family PN96_17500 PF00072 Response regulator receiver domain PN96_17505 PF07690 Major Facilitator Superfamily PN96_17510 PF03466 LysR substrate binding domain PN96_17510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_17520 PF00892 EamA-like transporter family PN96_17530 PF08206 Ribonuclease B OB domain PN96_17530 PF17876 Cold shock domain PN96_17530 PF08461 Ribonuclease R winged-helix domain PN96_17530 PF00575 S1 RNA binding domain PN96_17530 PF00773 RNB domain PN96_17535 PF00313 'Cold-shock' DNA-binding domain PN96_17545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_17545 PF03466 LysR substrate binding domain PN96_17550 PF00155 Aminotransferase class I and II PN96_17555 PF00497 Bacterial extracellular solute-binding proteins, family 3 PN96_17565 PF00860 Permease family PN96_17575 PF00576 HIUase/Transthyretin family PN96_17595 PF00111 2Fe-2S iron-sulfur cluster binding domain PN96_17595 PF01799 [2Fe-2S] binding domain PN96_17600 PF00440 Bacterial regulatory proteins, tetR family PN96_17600 PF08362 YcdC-like protein, C-terminal region PN96_17605 PF03358 NADPH-dependent FMN reductase PN96_17625 PF03466 LysR substrate binding domain PN96_17625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_17630 PF00221 Aromatic amino acid lyase PN96_17635 PF17391 Urocanase N-terminal domain PN96_17635 PF01175 Urocanase Rossmann-like domain PN96_17635 PF17392 Urocanase C-terminal domain PN96_17640 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) PN96_17645 PF00202 Aminotransferase class-III PN96_17650 PF00171 Aldehyde dehydrogenase family PN96_17655 PF01037 Lrp/AsnC ligand binding domain PN96_17660 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family PN96_17665 PF00557 Metallopeptidase family M24 PN96_17665 PF01321 Creatinase/Prolidase N-terminal domain PN96_17670 PF00356 Bacterial regulatory proteins, lacI family PN96_17675 PF13419 Haloacid dehalogenase-like hydrolase PN96_17680 PF00232 Glycosyl hydrolase family 1 PN96_17685 PF02378 Phosphotransferase system, EIIC PN96_17685 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 PN96_17685 PF00367 phosphotransferase system, EIIB PN96_17690 PF00232 Glycosyl hydrolase family 1 PN96_17710 PF00107 Zinc-binding dehydrogenase PN96_17710 PF08240 Alcohol dehydrogenase GroES-like domain PN96_17715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_17715 PF03466 LysR substrate binding domain PN96_17725 PF00270 DEAD/DEAH box helicase PN96_17725 PF00271 Helicase conserved C-terminal domain PN96_17735 PF03099 Biotin/lipoate A/B protein ligase family PN96_17765 PF02798 Glutathione S-transferase, N-terminal domain PN96_17780 PF00462 Glutaredoxin PN96_17780 PF08534 Redoxin PN96_17785 PF00962 Adenosine/AMP deaminase PN96_17800 PF00313 'Cold-shock' DNA-binding domain PN96_17805 PF05726 Pirin C-terminal cupin domain PN96_17805 PF02678 Pirin PN96_17810 PF01734 Patatin-like phospholipase PN96_17820 PF01047 MarR family PN96_17825 PF03733 Inner membrane component domain PN96_17830 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PN96_17835 PF08019 Phosphoethanolamine transferase EptA/EptB PN96_17835 PF00884 Sulfatase PN96_17840 PF01219 Prokaryotic diacylglycerol kinase PN96_17855 PF01323 DSBA-like thioredoxin domain PN96_17865 PF00255 Glutathione peroxidase PN96_17870 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase PN96_17890 PF01966 HD domain PN96_17895 PF01769 Divalent cation transporter PN96_17895 PF03448 MgtE intracellular N domain PN96_17895 PF00571 CBS domain PN96_17900 PF03109 ABC1 family PN96_17910 PF00155 Aminotransferase class I and II PN96_17910 PF00392 Bacterial regulatory proteins, gntR family PN96_17915 PF13520 Amino acid permease PN96_17920 PF13404 AsnC-type helix-turn-helix domain PN96_17920 PF01037 Lrp/AsnC ligand binding domain PN96_17925 PF03466 LysR substrate binding domain PN96_17925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_17940 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PN96_17940 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PN96_17945 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PN96_17950 PF01554 MatE PN96_17955 PF04363 Protein of unknown function (DUF496) PN96_17965 PF04337 Protein of unknown function, DUF480 PN96_17970 PF01541 GIY-YIG catalytic domain PN96_17980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PN96_17980 PF00512 His Kinase A (phospho-acceptor) domain PN96_17980 PF09308 LuxQ, periplasmic PN96_17980 PF00072 Response regulator receiver domain PN96_17990 PF00529 HlyD membrane-fusion protein of T1SS PN96_17990 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PN96_18010 PF01037 Lrp/AsnC ligand binding domain PN96_18030 PF02355 Protein export membrane protein PN96_18030 PF13721 SecD export protein N-terminal TM region PN96_18030 PF07549 SecD/SecF GG Motif PN96_18035 PF02355 Protein export membrane protein PN96_18035 PF07549 SecD/SecF GG Motif PN96_18040 PF01810 LysE type translocator PN96_18045 PF00106 short chain dehydrogenase PN96_18050 PF00108 Thiolase, N-terminal domain PN96_18050 PF02803 Thiolase, C-terminal domain PN96_18060 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus PN96_18060 PF00561 alpha/beta hydrolase fold PN96_18065 PF03264 NapC/NirT cytochrome c family, N-terminal region PN96_18070 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) PN96_18075 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PN96_18075 PF00384 Molybdopterin oxidoreductase PN96_18075 PF01568 Molydopterin dinucleotide binding domain PN96_18085 PF12838 4Fe-4S dicluster domain PN96_18085 PF13187 4Fe-4S dicluster domain PN96_18090 PF07730 Histidine kinase PN96_18090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PN96_18090 PF00672 HAMP domain PN96_18090 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term PN96_18095 PF00196 Bacterial regulatory proteins, luxR family PN96_18095 PF00072 Response regulator receiver domain PN96_18110 PF07687 Peptidase dimerisation domain PN96_18110 PF01546 Peptidase family M20/M25/M40 PN96_18115 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PN96_18120 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PN96_18125 PF00873 AcrB/AcrD/AcrF family PN96_18130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PN96_18130 PF00672 HAMP domain PN96_18130 PF12729 Four helix bundle sensory module for signal transduction PN96_18135 PF00472 RF-1 domain PN96_18140 PF13419 Haloacid dehalogenase-like hydrolase PN96_18145 PF00691 OmpA family PN96_18145 PF01389 OmpA-like transmembrane domain PN96_18150 PF00793 DAHP synthetase I family PN96_18155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PN96_18155 PF08447 PAS fold PN96_18160 PF02779 Transketolase, pyrimidine binding domain PN96_18160 PF02780 Transketolase, C-terminal domain PN96_18160 PF00456 Transketolase, thiamine diphosphate binding domain PN96_18165 PF00923 Transaldolase/Fructose-6-phosphate aldolase PN96_18175 PF16868 NMT1-like family PN96_18185 PF00581 Rhodanese-like domain PN96_18195 PF00899 ThiF family PN96_18200 PF03454 MoeA C-terminal region (domain IV) PN96_18200 PF03453 MoeA N-terminal region (domain I and II) PN96_18200 PF00994 Probable molybdopterin binding domain PN96_18205 PF01227 GTP cyclohydrolase I PN96_18215 PF00654 Voltage gated chloride channel PN96_18230 PF00248 Aldo/keto reductase family PN96_18235 PF03853 YjeF-related protein N-terminus PN96_18235 PF01256 Carbohydrate kinase PN96_18240 PF00478 IMP dehydrogenase / GMP reductase domain PN96_18245 PF02899 Phage integrase, N-terminal SAM-like domain PN96_18245 PF00589 Phage integrase family PN96_18250 PF03466 LysR substrate binding domain PN96_18250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_18255 PF12146 Serine aminopeptidase, S33 PN96_18275 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PN96_18280 PF06772 Bacterial low temperature requirement A protein (LtrA) PN96_18285 PF12146 Serine aminopeptidase, S33 PN96_18290 PF12146 Serine aminopeptidase, S33 PN96_18300 PF06719 AraC-type transcriptional regulator N-terminus PN96_18300 PF12833 Helix-turn-helix domain PN96_18305 PF01614 Bacterial transcriptional regulator PN96_18305 PF09339 IclR helix-turn-helix domain PN96_18310 PF12146 Serine aminopeptidase, S33 PN96_18315 PF00108 Thiolase, N-terminal domain PN96_18315 PF02803 Thiolase, C-terminal domain PN96_18320 PF01144 Coenzyme A transferase PN96_18325 PF01144 Coenzyme A transferase PN96_18330 PF03466 LysR substrate binding domain PN96_18330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_18335 PF13378 Enolase C-terminal domain-like PN96_18335 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain PN96_18340 PF02426 Muconolactone delta-isomerase PN96_18345 PF04444 Catechol dioxygenase N terminus PN96_18345 PF00775 Dioxygenase PN96_18350 PF00848 Ring hydroxylating alpha subunit (catalytic domain) PN96_18350 PF00355 Rieske [2Fe-2S] domain PN96_18355 PF00866 Ring hydroxylating beta subunit PN96_18360 PF00175 Oxidoreductase NAD-binding domain PN96_18360 PF00111 2Fe-2S iron-sulfur cluster binding domain PN96_18360 PF00970 Oxidoreductase FAD-binding domain PN96_18365 PF00106 short chain dehydrogenase PN96_18375 PF03466 LysR substrate binding domain PN96_18375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_18380 PF01546 Peptidase family M20/M25/M40 PN96_18380 PF07687 Peptidase dimerisation domain PN96_18385 PF03606 C4-dicarboxylate anaerobic carrier PN96_18395 PF02423 Ornithine cyclodeaminase/mu-crystallin family PN96_18410 PF07722 Peptidase C26 PN96_18415 PF10114 Sensory domain found in PocR PN96_18415 PF12833 Helix-turn-helix domain PN96_18430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_18430 PF03466 LysR substrate binding domain PN96_18435 PF01266 FAD dependent oxidoreductase PN96_18440 PF08943 CsiD PN96_18455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_18455 PF03466 LysR substrate binding domain PN96_18465 PF14814 Bifunctional transglycosylase second domain PN96_18465 PF00912 Transglycosylase PN96_18465 PF00905 Penicillin binding protein transpeptidase domain PN96_18470 PF00248 Aldo/keto reductase family PN96_18475 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PN96_18485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_18485 PF03466 LysR substrate binding domain PN96_18490 PF03480 Bacterial extracellular solute-binding protein, family 7 PN96_18500 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PN96_18510 PF01261 Xylose isomerase-like TIM barrel PN96_18515 PF01220 Dehydroquinase class II PN96_18520 PF18317 Shikimate 5'-dehydrogenase C-terminal domain PN96_18520 PF08501 Shikimate dehydrogenase substrate binding domain PN96_18525 PF04909 Amidohydrolase PN96_18530 PF03737 Aldolase/RraA PN96_18535 PF04303 PrpF protein PN96_18540 PF04909 Amidohydrolase PN96_18550 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase PN96_18560 PF07715 TonB-dependent Receptor Plug Domain PN96_18560 PF00593 TonB dependent receptor PN96_18565 PF03466 LysR substrate binding domain PN96_18565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_18575 PF00196 Bacterial regulatory proteins, luxR family PN96_18575 PF00072 Response regulator receiver domain PN96_18580 PF01494 FAD binding domain PN96_18590 PF12706 Beta-lactamase superfamily domain PN96_18595 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PN96_18605 PF03480 Bacterial extracellular solute-binding protein, family 7 PN96_18615 PF00005 ABC transporter PN96_18615 PF00664 ABC transporter transmembrane region PN96_18625 PF13533 Biotin-lipoyl like PN96_18635 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PN96_18645 PF03480 Bacterial extracellular solute-binding protein, family 7 PN96_18650 PF01575 MaoC like domain PN96_18650 PF00171 Aldehyde dehydrogenase family PN96_18655 PF05138 Phenylacetic acid catabolic protein PN96_18660 PF06243 Phenylacetic acid degradation B PN96_18665 PF05138 Phenylacetic acid catabolic protein PN96_18670 PF01883 Iron-sulfur cluster assembly protein PN96_18675 PF00111 2Fe-2S iron-sulfur cluster binding domain PN96_18675 PF00175 Oxidoreductase NAD-binding domain PN96_18675 PF00970 Oxidoreductase FAD-binding domain PN96_18680 PF00378 Enoyl-CoA hydratase/isomerase PN96_18685 PF00378 Enoyl-CoA hydratase/isomerase PN96_18690 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PN96_18690 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PN96_18690 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain PN96_18695 PF03061 Thioesterase superfamily PN96_18700 PF02803 Thiolase, C-terminal domain PN96_18700 PF00108 Thiolase, N-terminal domain PN96_18705 PF14535 AMP-binding enzyme C-terminal domain PN96_18705 PF00501 AMP-binding enzyme PN96_18710 PF07848 PaaX-like protein PN96_18710 PF08223 PaaX-like protein C-terminal domain PN96_18715 PF00132 Bacterial transferase hexapeptide (six repeats) PN96_18745 PF00132 Bacterial transferase hexapeptide (six repeats) PN96_18765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_18765 PF03466 LysR substrate binding domain PN96_18770 PF00795 Carbon-nitrogen hydrolase PN96_18775 PF01979 Amidohydrolase family PN96_18780 PF00248 Aldo/keto reductase family PN96_18785 PF00455 DeoR C terminal sensor domain PN96_18785 PF08220 DeoR-like helix-turn-helix domain PN96_18790 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase PN96_18790 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PN96_18795 PF07005 Sugar-binding N-terminal domain PN96_18795 PF17042 Nucleotide-binding C-terminal domain PN96_18800 PF00596 Class II Aldolase and Adducin N-terminal domain PN96_18805 PF01261 Xylose isomerase-like TIM barrel PN96_18810 PF02447 GntP family permease PN96_18815 PF00795 Carbon-nitrogen hydrolase PN96_18815 PF02540 NAD synthase PN96_18840 PF01875 Memo-like protein PN96_18855 PF00149 Calcineurin-like phosphoesterase PN96_18860 PF03466 LysR substrate binding domain PN96_18860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_18865 PF07690 Major Facilitator Superfamily PN96_18870 PF00892 EamA-like transporter family PN96_18880 PF01627 Hpt domain PN96_18880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PN96_18880 PF00512 His Kinase A (phospho-acceptor) domain PN96_18880 PF00989 PAS fold PN96_18880 PF00072 Response regulator receiver domain PN96_18880 PF00497 Bacterial extracellular solute-binding proteins, family 3 PN96_18885 PF00766 Electron transfer flavoprotein FAD-binding domain PN96_18885 PF01012 Electron transfer flavoprotein domain PN96_18890 PF01012 Electron transfer flavoprotein domain PN96_18900 PF00005 ABC transporter PN96_18900 PF12399 Branched-chain amino acid ATP-binding cassette transporter PN96_18925 PF00005 ABC transporter PN96_18930 PF00501 AMP-binding enzyme PN96_18930 PF14535 AMP-binding enzyme C-terminal domain PN96_18945 PF00034 Cytochrome c PN96_18955 PF12794 Mechanosensitive ion channel inner membrane domain 1 PN96_18955 PF12795 Mechanosensitive ion channel porin domain PN96_18955 PF00924 Mechanosensitive ion channel PN96_18960 PF03060 Nitronate monooxygenase PN96_18965 PF03466 LysR substrate binding domain PN96_18965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_18970 PF00497 Bacterial extracellular solute-binding proteins, family 3 PN96_18975 PF00528 Binding-protein-dependent transport system inner membrane component PN96_18980 PF00528 Binding-protein-dependent transport system inner membrane component PN96_18990 PF13378 Enolase C-terminal domain-like PN96_18990 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain PN96_19000 PF08267 Cobalamin-independent synthase, N-terminal domain PN96_19000 PF01717 Cobalamin-independent synthase, Catalytic domain PN96_19010 PF01047 MarR family PN96_19020 PF00682 HMGL-like PN96_19025 PF00289 Biotin carboxylase, N-terminal domain PN96_19025 PF02785 Biotin carboxylase C-terminal domain PN96_19025 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PN96_19030 PF00378 Enoyl-CoA hydratase/isomerase PN96_19035 PF01039 Carboxyl transferase domain PN96_19040 PF02770 Acyl-CoA dehydrogenase, middle domain PN96_19040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PN96_19040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PN96_19045 PF09278 MerR, DNA binding PN96_19045 PF00376 MerR family regulatory protein PN96_19050 PF00108 Thiolase, N-terminal domain PN96_19050 PF02803 Thiolase, C-terminal domain PN96_19055 PF00171 Aldehyde dehydrogenase family PN96_19060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PN96_19060 PF02770 Acyl-CoA dehydrogenase, middle domain PN96_19060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PN96_19065 PF00378 Enoyl-CoA hydratase/isomerase PN96_19075 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase PN96_19075 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PN96_19085 PF13977 BetI-type transcriptional repressor, C-terminal PN96_19085 PF00440 Bacterial regulatory proteins, tetR family PN96_19090 PF00171 Aldehyde dehydrogenase family PN96_19095 PF00732 GMC oxidoreductase PN96_19095 PF05199 GMC oxidoreductase PN96_19100 PF04069 Substrate binding domain of ABC-type glycine betaine transport system PN96_19105 PF00528 Binding-protein-dependent transport system inner membrane component PN96_19110 PF00571 CBS domain PN96_19110 PF00005 ABC transporter PN96_19115 PF01145 SPFH domain / Band 7 family PN96_19115 PF16200 C-terminal region of band_7 PN96_19125 PF03707 Bacterial signalling protein N terminal repeat PN96_19125 PF00990 Diguanylate cyclase, GGDEF domain PN96_19125 PF00563 EAL domain PN96_19125 PF13188 PAS domain PN96_19145 PF04116 Fatty acid hydroxylase superfamily PN96_19150 PF00072 Response regulator receiver domain PN96_19150 PF00196 Bacterial regulatory proteins, luxR family PN96_19155 PF03793 PASTA domain PN96_19155 PF00069 Protein kinase domain PN96_19160 PF07690 Major Facilitator Superfamily PN96_19170 PF18267 Rubredoxin NAD+ reductase C-terminal domain PN96_19170 PF07992 Pyridine nucleotide-disulphide oxidoreductase PN96_19170 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain PN96_19170 PF01077 Nitrite and sulphite reductase 4Fe-4S domain PN96_19170 PF04324 BFD-like [2Fe-2S] binding domain PN96_19180 PF00384 Molybdopterin oxidoreductase PN96_19180 PF01568 Molydopterin dinucleotide binding domain PN96_19180 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PN96_19180 PF04324 BFD-like [2Fe-2S] binding domain PN96_19185 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family PN96_19190 PF00148 Nitrogenase component 1 type Oxidoreductase PN96_19195 PF11844 Domain of unknown function (DUF3364) PN96_19195 PF00148 Nitrogenase component 1 type Oxidoreductase PN96_19205 PF16844 Dinitrogenase iron-molybdenum cofactor, N-terminal PN96_19205 PF02579 Dinitrogenase iron-molybdenum cofactor PN96_19215 PF00148 Nitrogenase component 1 type Oxidoreductase PN96_19220 PF00148 Nitrogenase component 1 type Oxidoreductase PN96_19225 PF02579 Dinitrogenase iron-molybdenum cofactor PN96_19235 PF01592 NifU-like N terminal domain PN96_19235 PF04324 BFD-like [2Fe-2S] binding domain PN96_19235 PF01106 NifU-like domain PN96_19240 PF00266 Aminotransferase class-V PN96_19245 PF00682 HMGL-like PN96_19255 PF04319 NifZ domain PN96_19260 PF00639 PPIC-type PPIASE domain PN96_19270 PF00528 Binding-protein-dependent transport system inner membrane component PN96_19275 PF00005 ABC transporter PN96_19275 PF03459 TOBE domain PN96_19280 PF00892 EamA-like transporter family PN96_19290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_19290 PF03466 LysR substrate binding domain PN96_19300 PF01202 Shikimate kinase PN96_19305 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PN96_19315 PF03480 Bacterial extracellular solute-binding protein, family 7 PN96_19320 PF01810 LysE type translocator PN96_19330 PF09905 DNA-binding protein VF530 PN96_19335 PF00313 'Cold-shock' DNA-binding domain PN96_19340 PF04891 NifQ PN96_19345 PF04055 Radical SAM superfamily PN96_19345 PF02579 Dinitrogenase iron-molybdenum cofactor PN96_19350 PF13185 GAF domain PN96_19350 PF02954 Bacterial regulatory protein, Fis family PN96_19350 PF00158 Sigma-54 interaction domain PN96_19355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PN96_19355 PF13426 PAS domain PN96_19355 PF00072 Response regulator receiver domain PN96_19360 PF02508 Rnf-Nqr subunit, membrane protein PN96_19365 PF04060 Putative Fe-S cluster PN96_19370 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit PN96_19370 PF13237 4Fe-4S dicluster domain PN96_19370 PF13375 RnfC Barrel sandwich hybrid domain PN96_19370 PF10531 SLBB domain PN96_19375 PF03116 NQR2, RnfD, RnfE family PN96_19380 PF04205 FMN-binding domain PN96_19385 PF02508 Rnf-Nqr subunit, membrane protein PN96_19390 PF03658 RnfH family Ubiquitin PN96_19395 PF00258 Flavodoxin PN96_19405 PF01527 Transposase PN96_19410 PF13276 HTH-like domain PN96_19410 PF13683 Integrase core domain PN96_19415 PF02321 Outer membrane efflux protein PN96_19420 PF00873 AcrB/AcrD/AcrF family PN96_19430 PF07690 Major Facilitator Superfamily PN96_19435 PF03466 LysR substrate binding domain PN96_19435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_19440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_19440 PF03466 LysR substrate binding domain PN96_19450 PF00874 PRD domain PN96_19450 PF03123 CAT RNA binding domain PN96_19455 PF02378 Phosphotransferase system, EIIC PN96_19455 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 PN96_19455 PF00367 phosphotransferase system, EIIB PN96_19460 PF00232 Glycosyl hydrolase family 1 PN96_19465 PF06039 Malate:quinone oxidoreductase (Mqo) PN96_19470 PF00206 Lyase PN96_19470 PF10415 Fumarase C C-terminus PN96_19475 PF00474 Sodium:solute symporter family PN96_19485 PF18327 Proline utilization A proline dehydrogenase N-terminal domain PN96_19485 PF14850 DNA-binding domain of Proline dehydrogenase PN96_19485 PF00171 Aldehyde dehydrogenase family PN96_19485 PF01619 Proline dehydrogenase PN96_19490 PF12833 Helix-turn-helix domain PN96_19505 PF13350 Tyrosine phosphatase family PN96_19515 PF03466 LysR substrate binding domain PN96_19515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_19520 PF00171 Aldehyde dehydrogenase family PN96_19530 PF17149 Periplasmic sensor domain found in signal transduction proteins PN96_19530 PF00672 HAMP domain PN96_19530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PN96_19530 PF00512 His Kinase A (phospho-acceptor) domain PN96_19530 PF00072 Response regulator receiver domain PN96_19530 PF01627 Hpt domain PN96_19540 PF00486 Transcriptional regulatory protein, C terminal PN96_19540 PF00072 Response regulator receiver domain PN96_19545 PF01266 FAD dependent oxidoreductase PN96_19560 PF07729 FCD domain PN96_19560 PF00392 Bacterial regulatory proteins, gntR family PN96_19565 PF05544 Proline racemase PN96_19570 PF01266 FAD dependent oxidoreductase PN96_19570 PF01266 FAD dependent oxidoreductase PN96_19575 PF03553 Na+/H+ antiporter family PN96_19580 PF00701 Dihydrodipicolinate synthetase family PN96_19585 PF00171 Aldehyde dehydrogenase family PN96_19590 PF07690 Major Facilitator Superfamily PN96_19595 PF00892 EamA-like transporter family PN96_19600 PF12833 Helix-turn-helix domain PN96_19600 PF02311 AraC-like ligand binding domain PN96_19605 PF01037 Lrp/AsnC ligand binding domain PN96_19610 PF08502 LeuA allosteric (dimerisation) domain PN96_19610 PF00682 HMGL-like PN96_19625 PF00892 EamA-like transporter family PN96_19630 PF00376 MerR family regulatory protein PN96_19630 PF09278 MerR, DNA binding PN96_19635 PF13356 Arm DNA-binding domain PN96_19635 PF14659 Phage integrase, N-terminal SAM-like domain PN96_19635 PF00589 Phage integrase family PN96_19680 PF00563 EAL domain PN96_19680 PF00990 Diguanylate cyclase, GGDEF domain PN96_19685 PF05025 RbsD / FucU transport protein family PN96_19690 PF00005 ABC transporter PN96_19695 PF02653 Branched-chain amino acid transport system / permease component PN96_19700 PF13407 Periplasmic binding protein domain PN96_19705 PF00294 pfkB family carbohydrate kinase PN96_19710 PF00356 Bacterial regulatory proteins, lacI family PN96_19715 PF13411 MerR HTH family regulatory protein PN96_19725 PF12805 FUSC-like inner membrane protein yccS PN96_19730 PF12462 DNA helicase IV / RNA helicase N terminal PN96_19730 PF13361 UvrD-like helicase C-terminal domain PN96_19730 PF00580 UvrD/REP helicase N-terminal domain PN96_19735 PF02142 MGS-like domain PN96_19740 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family PN96_19745 PF00672 HAMP domain PN96_19745 PF00072 Response regulator receiver domain PN96_19745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PN96_19745 PF01627 Hpt domain PN96_19745 PF00512 His Kinase A (phospho-acceptor) domain PN96_19765 PF16385 Domain of unknown function PN96_19765 PF00884 Sulfatase PN96_19770 PF04055 Radical SAM superfamily PN96_19770 PF13186 Iron-sulfur cluster-binding domain PN96_19775 PF17863 AAA lid domain PN96_19775 PF07726 ATPase family associated with various cellular activities (AAA) PN96_19790 PF00092 von Willebrand factor type A domain PN96_19805 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PN96_19805 PF01872 RibD C-terminal domain PN96_19810 PF00781 Diacylglycerol kinase catalytic domain PN96_19815 PF08774 VRR-NUC domain PN96_19815 PF18081 Fanconi anemia-associated nuclease SAP domain PN96_19820 PF07690 Major Facilitator Superfamily PN96_19830 PF01435 Peptidase family M48 PN96_19835 PF04011 LemA family PN96_19840 PF03606 C4-dicarboxylate anaerobic carrier PN96_19850 PF00814 Glycoprotease family PN96_19850 PF00583 Acetyltransferase (GNAT) family PN96_19855 PF00072 Response regulator receiver domain PN96_19855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PN96_19860 PF01926 50S ribosome-binding GTPase PN96_19865 PF09456 RcsC Alpha-Beta-Loop (ABL) PN96_19865 PF00072 Response regulator receiver domain PN96_19865 PF00512 His Kinase A (phospho-acceptor) domain PN96_19865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PN96_19870 PF03707 Bacterial signalling protein N terminal repeat PN96_19870 PF13188 PAS domain PN96_19870 PF00990 Diguanylate cyclase, GGDEF domain PN96_19870 PF00563 EAL domain PN96_19875 PF00196 Bacterial regulatory proteins, luxR family PN96_19875 PF00072 Response regulator receiver domain PN96_19880 PF00990 Diguanylate cyclase, GGDEF domain PN96_19890 PF00072 Response regulator receiver domain PN96_19890 PF00196 Bacterial regulatory proteins, luxR family PN96_19920 PF00892 EamA-like transporter family PN96_19935 PF00939 Sodium:sulfate symporter transmembrane region PN96_19945 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain PN96_19945 PF00989 PAS fold PN96_19945 PF17203 Single cache domain 3 PN96_19945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PN96_19950 PF00072 Response regulator receiver domain PN96_19950 PF12431 Transcriptional regulator PN96_19960 PF01645 Conserved region in glutamate synthase PN96_19965 PF00141 Peroxidase PN96_19990 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PN96_20000 PF03480 Bacterial extracellular solute-binding protein, family 7 PN96_20005 PF07730 Histidine kinase PN96_20005 PF17200 Single Cache domain 2 PN96_20010 PF00196 Bacterial regulatory proteins, luxR family PN96_20010 PF00072 Response regulator receiver domain PN96_20015 PF03466 LysR substrate binding domain PN96_20015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_20020 PF01144 Coenzyme A transferase PN96_20030 PF01418 Helix-turn-helix domain, rpiR family PN96_20030 PF01380 SIS domain PN96_20040 PF00528 Binding-protein-dependent transport system inner membrane component PN96_20045 PF00528 Binding-protein-dependent transport system inner membrane component PN96_20050 PF00005 ABC transporter PN96_20055 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PN96_20060 PF00528 Binding-protein-dependent transport system inner membrane component PN96_20065 PF00528 Binding-protein-dependent transport system inner membrane component PN96_20065 PF12911 N-terminal TM domain of oligopeptide transport permease C PN96_20070 PF00005 ABC transporter PN96_20070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PN96_20075 PF01804 Penicillin amidase PN96_20090 PF00512 His Kinase A (phospho-acceptor) domain PN96_20090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PN96_20090 PF00672 HAMP domain PN96_20095 PF00486 Transcriptional regulatory protein, C terminal PN96_20095 PF00072 Response regulator receiver domain PN96_20105 PF01047 MarR family PN96_20110 PF00107 Zinc-binding dehydrogenase PN96_20110 PF16884 N-terminal domain of oxidoreductase PN96_20115 PF12320 Type 5 capsule protein repressor C-terminal domain PN96_20115 PF00149 Calcineurin-like phosphoesterase PN96_20120 PF13476 AAA domain PN96_20140 PF01638 HxlR-like helix-turn-helix PN96_20145 PF05368 NmrA-like family PN96_20150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_20150 PF03466 LysR substrate binding domain PN96_20160 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PN96_20165 PF03480 Bacterial extracellular solute-binding protein, family 7 PN96_20170 PF01266 FAD dependent oxidoreductase PN96_20180 PF07992 Pyridine nucleotide-disulphide oxidoreductase PN96_20180 PF04324 BFD-like [2Fe-2S] binding domain PN96_20185 PF01042 Endoribonuclease L-PSP PN96_20195 PF08212 Lipocalin-like domain PN96_20210 PF01212 Beta-eliminating lyase PN96_20215 PF00293 NUDIX domain PN96_20220 PF12592 Protein of unknown function (DUF3763) PN96_20220 PF07728 AAA domain (dynein-related subfamily) PN96_20220 PF17868 AAA lid domain PN96_20225 PF05762 VWA domain containing CoxE-like protein PN96_20235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_20235 PF03466 LysR substrate binding domain PN96_20240 PF09330 D-lactate dehydrogenase, membrane binding PN96_20240 PF01565 FAD binding domain PN96_20280 PF00990 Diguanylate cyclase, GGDEF domain PN96_20280 PF00072 Response regulator receiver domain PN96_20290 PF13462 Thioredoxin PN96_20290 PF06965 Na+/H+ antiporter 1 PN96_20310 PF00563 EAL domain PN96_20310 PF00990 Diguanylate cyclase, GGDEF domain PN96_20310 PF13426 PAS domain PN96_20315 PF01272 Transcription elongation factor, GreA/GreB, C-term PN96_20315 PF14760 Rnk N-terminus PN96_20320 PF04324 BFD-like [2Fe-2S] binding domain PN96_20320 PF18267 Rubredoxin NAD+ reductase C-terminal domain PN96_20320 PF07992 Pyridine nucleotide-disulphide oxidoreductase PN96_20320 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain PN96_20320 PF01077 Nitrite and sulphite reductase 4Fe-4S domain PN96_20325 PF13806 Rieske-like [2Fe-2S] domain PN96_20330 PF01226 Formate/nitrite transporter PN96_20335 PF10414 Sirohaem synthase dimerisation region PN96_20335 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PN96_20335 PF14824 Sirohaem biosynthesis protein central PN96_20350 PF03605 Anaerobic c4-dicarboxylate membrane transporter PN96_20365 PF11756 Nitrous oxide-stimulated promoter PN96_20370 PF07690 Major Facilitator Superfamily PN96_20375 PF00085 Thioredoxin PN96_20380 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PN96_20380 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal PN96_20400 PF02634 FdhD/NarQ family PN96_20405 PF03466 LysR substrate binding domain PN96_20405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_20410 PF00384 Molybdopterin oxidoreductase PN96_20410 PF01568 Molydopterin dinucleotide binding domain PN96_20415 PF07992 Pyridine nucleotide-disulphide oxidoreductase PN96_20415 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PN96_20430 PF04143 Sulphur transport PN96_20440 PF00873 AcrB/AcrD/AcrF family PN96_20445 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PN96_20455 PF13597 Anaerobic ribonucleoside-triphosphate reductase PN96_20455 PF03477 ATP cone domain PN96_20465 PF01554 MatE PN96_20470 PF12852 Cupin PN96_20470 PF12833 Helix-turn-helix domain PN96_20475 PF00155 Aminotransferase class I and II PN96_20480 PF08443 RimK-like ATP-grasp domain PN96_20480 PF18030 RimK PreATP-grasp domain PN96_20490 PF07685 CobB/CobQ-like glutamine amidotransferase domain PN96_20500 PF00528 Binding-protein-dependent transport system inner membrane component PN96_20505 PF03459 TOBE domain PN96_20505 PF00005 ABC transporter PN96_20515 PF00563 EAL domain PN96_20515 PF01590 GAF domain PN96_20515 PF00990 Diguanylate cyclase, GGDEF domain PN96_20515 PF00360 Phytochrome region PN96_20520 PF05230 MASE2 domain PN96_20520 PF00990 Diguanylate cyclase, GGDEF domain PN96_20535 PF01262 Alanine dehydrogenase/PNT, C-terminal domain PN96_20535 PF05222 Alanine dehydrogenase/PNT, N-terminal domain PN96_20535 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch PN96_20540 PF02233 NAD(P) transhydrogenase beta subunit PN96_20550 PF00072 Response regulator receiver domain PN96_20550 PF00486 Transcriptional regulatory protein, C terminal PN96_20565 PF00582 Universal stress protein family PN96_20585 PF01253 Translation initiation factor SUI1 PN96_20595 PF07478 D-ala D-ala ligase C-terminus PN96_20595 PF01820 D-ala D-ala ligase N-terminus PN96_20600 PF05036 Sporulation related domain PN96_20605 PF13380 CoA binding domain PN96_20605 PF00583 Acetyltransferase (GNAT) family PN96_20605 PF13607 Succinyl-CoA ligase like flavodoxin domain PN96_20610 PF03466 LysR substrate binding domain PN96_20610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_20615 PF16363 GDP-mannose 4,6 dehydratase PN96_20620 PF13426 PAS domain PN96_20620 PF08448 PAS fold PN96_20620 PF08447 PAS fold PN96_20620 PF05231 MASE1 PN96_20620 PF00990 Diguanylate cyclase, GGDEF domain PN96_20620 PF00563 EAL domain PN96_20625 PF03746 LamB/YcsF family PN96_20630 PF02682 Carboxyltransferase domain, subdomain C and D PN96_20635 PF02626 Carboxyltransferase domain, subdomain A and B PN96_20640 PF01593 Flavin containing amine oxidoreductase PN96_20650 PF00005 ABC transporter PN96_20655 PF13472 GDSL-like Lipase/Acylhydrolase family PN96_20660 PF07055 Enoyl reductase FAD binding domain PN96_20660 PF12241 Trans-2-enoyl-CoA reductase catalytic region PN96_20660 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase PN96_20665 PF13188 PAS domain PN96_20665 PF03707 Bacterial signalling protein N terminal repeat PN96_20665 PF00563 EAL domain PN96_20665 PF00990 Diguanylate cyclase, GGDEF domain PN96_20675 PF00226 DnaJ domain PN96_20675 PF00684 DnaJ central domain PN96_20675 PF01556 DnaJ C terminal domain PN96_20690 PF03091 CutA1 divalent ion tolerance protein PN96_20700 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PN96_20700 PF12793 Sugar transport-related sRNA regulator N-term PN96_20710 PF03061 Thioesterase superfamily PN96_20715 PF01435 Peptidase family M48 PN96_20725 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) PN96_20730 PF12262 Bacterial virulence factor lipase N-terminal PN96_20745 PF03741 Integral membrane protein TerC family PN96_20755 PF02872 5'-nucleotidase, C-terminal domain PN96_20755 PF00149 Calcineurin-like phosphoesterase PN96_20760 PF11398 Protein of unknown function (DUF2813) PN96_20765 PF06496 Protein of unknown function (DUF1097) PN96_20770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_20770 PF03466 LysR substrate binding domain PN96_20775 PF01226 Formate/nitrite transporter PN96_20780 PF04264 YceI-like domain PN96_20785 PF01292 Prokaryotic cytochrome b561 PN96_20800 PF12792 CSS motif domain associated with EAL PN96_20800 PF00563 EAL domain PN96_20805 PF00270 DEAD/DEAH box helicase PN96_20805 PF00271 Helicase conserved C-terminal domain PN96_20810 PF04336 Acyl carrier protein phosphodiesterase PN96_20815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PN96_20815 PF12729 Four helix bundle sensory module for signal transduction PN96_20815 PF00672 HAMP domain PN96_20820 PF13419 Haloacid dehalogenase-like hydrolase PN96_20835 PF00294 pfkB family carbohydrate kinase PN96_20840 PF01268 Formate--tetrahydrofolate ligase PN96_20845 PF00483 Nucleotidyl transferase PN96_20850 PF00704 Glycosyl hydrolases family 18 PN96_20850 PF06483 Chitinase C PN96_20855 PF12833 Helix-turn-helix domain PN96_20855 PF06719 AraC-type transcriptional regulator N-terminus PN96_20860 PF00465 Iron-containing alcohol dehydrogenase PN96_20870 PF00005 ABC transporter PN96_20875 PF00528 Binding-protein-dependent transport system inner membrane component PN96_20880 PF00497 Bacterial extracellular solute-binding proteins, family 3 PN96_20885 PF00528 Binding-protein-dependent transport system inner membrane component PN96_20900 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family PN96_20900 PF00356 Bacterial regulatory proteins, lacI family PN96_20905 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PN96_20905 PF00381 PTS HPr component phosphorylation site PN96_20910 PF00294 pfkB family carbohydrate kinase PN96_20915 PF02378 Phosphotransferase system, EIIC PN96_20915 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit PN96_20920 PF00873 AcrB/AcrD/AcrF family PN96_20930 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PN96_20940 PF01571 Aminomethyltransferase folate-binding domain PN96_20940 PF08669 Glycine cleavage T-protein C-terminal barrel domain PN96_20950 PF00464 Serine hydroxymethyltransferase PN96_20955 PF01597 Glycine cleavage H-protein PN96_20960 PF02347 Glycine cleavage system P-protein PN96_21010 PF01063 Amino-transferase class IV PN96_21015 PF00497 Bacterial extracellular solute-binding proteins, family 3 PN96_21020 PF00591 Glycosyl transferase family, a/b domain PN96_21020 PF02885 Glycosyl transferase family, helical bundle domain PN96_21025 PF03222 Tryptophan/tyrosine permease family PN96_21055 PF00012 Hsp70 protein PN96_21070 PF00676 Dehydrogenase E1 component PN96_21075 PF02779 Transketolase, pyrimidine binding domain PN96_21075 PF02780 Transketolase, C-terminal domain PN96_21080 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PN96_21080 PF00364 Biotin-requiring enzyme PN96_21080 PF02817 e3 binding domain PN96_21090 PF00668 Condensation domain PN96_21090 PF00550 Phosphopantetheine attachment site PN96_21090 PF13193 AMP-binding enzyme C-terminal domain PN96_21090 PF00501 AMP-binding enzyme PN96_21090 PF00202 Aminotransferase class-III PN96_21090 PF02801 Beta-ketoacyl synthase, C-terminal domain PN96_21090 PF00109 Beta-ketoacyl synthase, N-terminal domain PN96_21090 PF16197 Ketoacyl-synthetase C-terminal extension PN96_21095 PF08220 DeoR-like helix-turn-helix domain PN96_21095 PF00455 DeoR C terminal sensor domain PN96_21100 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PN96_21100 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PN96_21105 PF03928 Haem-degrading PN96_21120 PF13193 AMP-binding enzyme C-terminal domain PN96_21120 PF00501 AMP-binding enzyme PN96_21125 PF02779 Transketolase, pyrimidine binding domain PN96_21125 PF02780 Transketolase, C-terminal domain PN96_21125 PF00364 Biotin-requiring enzyme PN96_21130 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PN96_21130 PF00364 Biotin-requiring enzyme PN96_21130 PF02817 e3 binding domain PN96_21140 PF02896 PEP-utilising enzyme, TIM barrel domain PN96_21140 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PN96_21140 PF00391 PEP-utilising enzyme, mobile domain PN96_21145 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B PN96_21155 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PN96_21155 PF00384 Molybdopterin oxidoreductase PN96_21155 PF01568 Molydopterin dinucleotide binding domain PN96_21160 PF00690 Cation transporter/ATPase, N-terminus PN96_21160 PF00689 Cation transporting ATPase, C-terminus PN96_21185 PF01590 GAF domain PN96_21185 PF00158 Sigma-54 interaction domain PN96_21190 PF10605 3HB-oligomer hydrolase (3HBOH) PN96_21195 PF00474 Sodium:solute symporter family PN96_21200 PF16875 Glycosyl hydrolase family 36 N-terminal domain PN96_21200 PF16874 Glycosyl hydrolase family 36 C-terminal domain PN96_21205 PF00356 Bacterial regulatory proteins, lacI family PN96_21210 PF02899 Phage integrase, N-terminal SAM-like domain PN96_21210 PF00589 Phage integrase family PN96_21230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_21230 PF03466 LysR substrate binding domain PN96_21240 PF03466 LysR substrate binding domain PN96_21240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_21245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_21245 PF03466 LysR substrate binding domain PN96_21265 PF03466 LysR substrate binding domain PN96_21265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_21275 PF04151 Bacterial pre-peptidase C-terminal domain PN96_21275 PF00082 Subtilase family PN96_21280 PF05995 Cysteine dioxygenase type I PN96_21290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_21290 PF03466 LysR substrate binding domain PN96_21300 PF01235 Sodium:alanine symporter family PN96_21305 PF00528 Binding-protein-dependent transport system inner membrane component PN96_21310 PF00528 Binding-protein-dependent transport system inner membrane component PN96_21315 PF00497 Bacterial extracellular solute-binding proteins, family 3 PN96_21320 PF00005 ABC transporter PN96_21325 PF01565 FAD binding domain PN96_21325 PF08031 Berberine and berberine like PN96_21330 PF00141 Peroxidase PN96_21355 PF02574 Homocysteine S-methyltransferase PN96_21360 PF13520 Amino acid permease PN96_21370 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PN96_21385 PF02028 BCCT, betaine/carnitine/choline family transporter PN96_21395 PF00171 Aldehyde dehydrogenase family PN96_21410 PF01040 UbiA prenyltransferase family PN96_21420 PF00510 Cytochrome c oxidase subunit III PN96_21425 PF00115 Cytochrome C and Quinol oxidase polypeptide I PN96_21430 PF06481 COX Aromatic Rich Motif PN96_21430 PF00116 Cytochrome C oxidase subunit II, periplasmic domain PN96_21440 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PN96_21440 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase PN96_21445 PF00378 Enoyl-CoA hydratase/isomerase PN96_21450 PF00378 Enoyl-CoA hydratase/isomerase PN96_21455 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PN96_21455 PF02770 Acyl-CoA dehydrogenase, middle domain PN96_21455 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PN96_21460 PF00171 Aldehyde dehydrogenase family PN96_21465 PF02803 Thiolase, C-terminal domain PN96_21465 PF00108 Thiolase, N-terminal domain PN96_21470 PF00376 MerR family regulatory protein PN96_21470 PF09278 MerR, DNA binding PN96_21475 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PN96_21475 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PN96_21475 PF02770 Acyl-CoA dehydrogenase, middle domain PN96_21480 PF01039 Carboxyl transferase domain PN96_21490 PF00682 HMGL-like PN96_21495 PF10063 Uncharacterized integral membrane protein (DUF2301) PN96_21505 PF08447 PAS fold PN96_21505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PN96_21505 PF13426 PAS domain PN96_21510 PF00871 Acetokinase family PN96_21515 PF03707 Bacterial signalling protein N terminal repeat PN96_21515 PF00563 EAL domain PN96_21515 PF00990 Diguanylate cyclase, GGDEF domain PN96_21520 PF00271 Helicase conserved C-terminal domain PN96_21520 PF00270 DEAD/DEAH box helicase PN96_21520 PF03880 DbpA RNA binding domain PN96_21525 PF00465 Iron-containing alcohol dehydrogenase PN96_21530 PF00596 Class II Aldolase and Adducin N-terminal domain PN96_21535 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PN96_21535 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PN96_21540 PF07882 L-fucose isomerase, second N-terminal domain PN96_21540 PF07881 L-fucose isomerase, first N-terminal domain PN96_21540 PF02952 L-fucose isomerase, C-terminal domain PN96_21545 PF00455 DeoR C terminal sensor domain PN96_21545 PF08220 DeoR-like helix-turn-helix domain PN96_21550 PF03334 Na+/H+ antiporter subunit PN96_21555 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) PN96_21575 PF00361 Proton-conducting membrane transporter PN96_21575 PF13244 Domain of unknown function (DUF4040) PN96_21575 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus PN96_21575 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter PN96_21585 PF00582 Universal stress protein family PN96_21590 PF00575 S1 RNA binding domain PN96_21590 PF00773 RNB domain PN96_21590 PF08206 Ribonuclease B OB domain PN96_21600 PF12849 PBP superfamily domain PN96_21615 PF18644 Phage integrase SAM-like domain PN96_21615 PF00589 Phage integrase family PN96_21665 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PN96_21665 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain PN96_21670 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain PN96_21670 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain PN96_21675 PF00258 Flavodoxin PN96_21675 PF00175 Oxidoreductase NAD-binding domain PN96_21675 PF00667 FAD binding domain PN96_21685 PF00202 Aminotransferase class-III PN96_21690 PF00067 Cytochrome P450 PN96_21695 PF13520 Amino acid permease PN96_21720 PF08240 Alcohol dehydrogenase GroES-like domain PN96_21720 PF00107 Zinc-binding dehydrogenase PN96_21735 PF00067 Cytochrome P450 PN96_21745 PF00561 alpha/beta hydrolase fold PN96_21755 PF01261 Xylose isomerase-like TIM barrel PN96_21765 PF00440 Bacterial regulatory proteins, tetR family PN96_21770 PF07992 Pyridine nucleotide-disulphide oxidoreductase PN96_21775 PF00085 Thioredoxin PN96_21780 PF00085 Thioredoxin PN96_21790 PF07690 Major Facilitator Superfamily PN96_21795 PF07992 Pyridine nucleotide-disulphide oxidoreductase PN96_21795 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PN96_21800 PF00581 Rhodanese-like domain PN96_21810 PF00696 Amino acid kinase family PN96_21815 PF06545 Protein of unknown function (DUF1116) PN96_21820 PF02629 CoA binding domain PN96_21820 PF00549 CoA-ligase PN96_21850 PF03928 Haem-degrading PN96_21855 PF00486 Transcriptional regulatory protein, C terminal PN96_21855 PF00072 Response regulator receiver domain PN96_21860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PN96_21860 PF16736 Single Cache-like PN96_21860 PF00989 PAS fold PN96_21860 PF00512 His Kinase A (phospho-acceptor) domain PN96_21865 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PN96_21870 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin PN96_21885 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PN96_21900 PF01594 AI-2E family transporter PN96_21905 PF01527 Transposase PN96_21915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_21915 PF03466 LysR substrate binding domain PN96_21920 PF08543 Phosphomethylpyrimidine kinase PN96_21930 PF00529 HlyD membrane-fusion protein of T1SS PN96_21930 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PN96_21935 PF12794 Mechanosensitive ion channel inner membrane domain 1 PN96_21935 PF00924 Mechanosensitive ion channel PN96_21935 PF12795 Mechanosensitive ion channel porin domain PN96_21950 PF00005 ABC transporter PN96_21955 PF02405 Permease MlaE PN96_21965 PF13533 Biotin-lipoyl like PN96_21990 PF00072 Response regulator receiver domain PN96_21990 PF00990 Diguanylate cyclase, GGDEF domain PN96_21995 PF01925 Sulfite exporter TauE/SafE PN96_22000 PF01515 Phosphate acetyl/butaryl transferase PN96_22005 PF09339 IclR helix-turn-helix domain PN96_22005 PF01614 Bacterial transcriptional regulator PN96_22015 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PN96_22020 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component PN96_22025 PF03480 Bacterial extracellular solute-binding protein, family 7 PN96_22030 PF01266 FAD dependent oxidoreductase PN96_22045 PF03601 Conserved hypothetical protein 698 PN96_22050 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PN96_22050 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PN96_22050 PF00205 Thiamine pyrophosphate enzyme, central domain PN96_22055 PF12556 Cobaltochelatase CobS subunit N terminal PN96_22055 PF08406 CbbQ/NirQ/NorQ C-terminal PN96_22055 PF07728 AAA domain (dynein-related subfamily) PN96_22060 PF11775 Cobalamin biosynthesis protein CobT VWA domain PN96_22060 PF06213 Cobalamin biosynthesis protein CobT PN96_22065 PF13419 Haloacid dehalogenase-like hydrolase PN96_22070 PF07690 Major Facilitator Superfamily PN96_22075 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PN96_22075 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PN96_22080 PF01232 Mannitol dehydrogenase Rossmann domain PN96_22080 PF08125 Mannitol dehydrogenase C-terminal domain PN96_22085 PF04198 Putative sugar-binding domain PN96_22110 PF00155 Aminotransferase class I and II PN96_22125 PF12833 Helix-turn-helix domain PN96_22125 PF06719 AraC-type transcriptional regulator N-terminus PN96_22130 PF00288 GHMP kinases N terminal domain PN96_22130 PF08544 GHMP kinases C terminal PN96_22130 PF10509 Galactokinase galactose-binding signature PN96_22135 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain PN96_22135 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain PN96_22140 PF16363 GDP-mannose 4,6 dehydratase PN96_22145 PF00107 Zinc-binding dehydrogenase PN96_22145 PF08240 Alcohol dehydrogenase GroES-like domain PN96_22150 PF12833 Helix-turn-helix domain PN96_22155 PF03315 Serine dehydratase beta chain PN96_22155 PF03313 Serine dehydratase alpha chain PN96_22160 PF00551 Formyl transferase PN96_22170 PF17806 Sarcosine oxidase A3 domain PN96_22170 PF07992 Pyridine nucleotide-disulphide oxidoreductase PN96_22170 PF01571 Aminomethyltransferase folate-binding domain PN96_22170 PF08669 Glycine cleavage T-protein C-terminal barrel domain PN96_22175 PF04267 Sarcosine oxidase, delta subunit family PN96_22180 PF01266 FAD dependent oxidoreductase PN96_22185 PF00464 Serine hydroxymethyltransferase PN96_22190 PF00111 2Fe-2S iron-sulfur cluster binding domain PN96_22190 PF00970 Oxidoreductase FAD-binding domain PN96_22190 PF00175 Oxidoreductase NAD-binding domain PN96_22195 PF00848 Ring hydroxylating alpha subunit (catalytic domain) PN96_22195 PF00355 Rieske [2Fe-2S] domain PN96_22200 PF00202 Aminotransferase class-III PN96_22210 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PN96_22220 PF03480 Bacterial extracellular solute-binding protein, family 7 PN96_22225 PF00171 Aldehyde dehydrogenase family PN96_22230 PF03466 LysR substrate binding domain PN96_22230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_22295 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PN96_22295 PF00306 ATP synthase alpha/beta chain, C terminal domain PN96_22300 PF00430 ATP synthase B/B' CF(0) PN96_22300 PF00213 ATP synthase delta (OSCP) subunit PN96_22305 PF00137 ATP synthase subunit C PN96_22310 PF00119 ATP synthase A chain PN96_22325 PF02874 ATP synthase alpha/beta family, beta-barrel domain PN96_22325 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PN96_22330 PF00248 Aldo/keto reductase family PN96_22340 PF02028 BCCT, betaine/carnitine/choline family transporter PN96_22350 PF00766 Electron transfer flavoprotein FAD-binding domain PN96_22350 PF01012 Electron transfer flavoprotein domain PN96_22360 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PN96_22375 PF01965 DJ-1/PfpI family PN96_22375 PF12833 Helix-turn-helix domain PN96_22380 PF02129 X-Pro dipeptidyl-peptidase (S15 family) PN96_22385 PF00465 Iron-containing alcohol dehydrogenase PN96_22390 PF02685 Glucokinase PN96_22395 PF12706 Beta-lactamase superfamily domain PN96_22405 PF00005 ABC transporter PN96_22410 PF12792 CSS motif domain associated with EAL PN96_22410 PF00563 EAL domain PN96_22425 PF00271 Helicase conserved C-terminal domain PN96_22425 PF00270 DEAD/DEAH box helicase PN96_22430 PF07683 Cobalamin synthesis protein cobW C-terminal domain PN96_22430 PF02492 CobW/HypB/UreG, nucleotide-binding domain PN96_22435 PF01470 Pyroglutamyl peptidase PN96_22445 PF00291 Pyridoxal-phosphate dependent enzyme PN96_22450 PF12843 Putative quorum-sensing-regulated virulence factor PN96_22470 PF01329 Pterin 4 alpha carbinolamine dehydratase PN96_22475 PF00351 Biopterin-dependent aromatic amino acid hydroxylase PN96_22480 PF13193 AMP-binding enzyme C-terminal domain PN96_22480 PF00501 AMP-binding enzyme PN96_22490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_22490 PF03466 LysR substrate binding domain PN96_22500 PF00892 EamA-like transporter family PN96_22510 PF00465 Iron-containing alcohol dehydrogenase PN96_22515 PF07995 Glucose / Sorbosone dehydrogenase PN96_22525 PF00210 Ferritin-like domain PN96_22530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PN96_22530 PF00672 HAMP domain PN96_22540 PF12704 MacB-like periplasmic core domain PN96_22540 PF02687 FtsX-like permease family PN96_22540 PF00005 ABC transporter PN96_22545 PF12704 MacB-like periplasmic core domain PN96_22545 PF02687 FtsX-like permease family PN96_22545 PF00005 ABC transporter PN96_22565 PF00313 'Cold-shock' DNA-binding domain PN96_22585 PF00691 OmpA family PN96_22585 PF05736 OprF membrane domain PN96_22595 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase PN96_22595 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PN96_22600 PF01040 UbiA prenyltransferase family PN96_22605 PF02628 Cytochrome oxidase assembly protein PN96_22625 PF00510 Cytochrome c oxidase subunit III PN96_22630 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 PN96_22635 PF00115 Cytochrome C and Quinol oxidase polypeptide I PN96_22640 PF02790 Cytochrome C oxidase subunit II, transmembrane domain PN96_22640 PF00116 Cytochrome C oxidase subunit II, periplasmic domain PN96_22645 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PN96_22645 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PN96_22645 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PN96_22645 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PN96_22650 PF01810 LysE type translocator PN96_22670 PF01557 Fumarylacetoacetate (FAA) hydrolase family PN96_22690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_22690 PF03466 LysR substrate binding domain PN96_22695 PF00990 Diguanylate cyclase, GGDEF domain PN96_22695 PF00563 EAL domain PN96_22695 PF08448 PAS fold PN96_22695 PF08447 PAS fold PN96_22700 PF01551 Peptidase family M23 PN96_22700 PF01476 LysM domain PN96_22700 PF08525 Opacity-associated protein A N-terminal motif PN96_22725 PF02743 Cache domain PN96_22725 PF00672 HAMP domain PN96_22725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PN96_22735 PF03222 Tryptophan/tyrosine permease family PN96_22755 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PN96_22765 PF01758 Sodium Bile acid symporter family PN96_22770 PF02567 Phenazine biosynthesis-like protein PN96_22780 PF00005 ABC transporter PN96_22795 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PN96_22795 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region PN96_22795 PF12838 4Fe-4S dicluster domain PN96_22795 PF00384 Molybdopterin oxidoreductase PN96_22795 PF01568 Molydopterin dinucleotide binding domain PN96_22810 PF00873 AcrB/AcrD/AcrF family PN96_22820 PF00970 Oxidoreductase FAD-binding domain PN96_22820 PF00175 Oxidoreductase NAD-binding domain PN96_22820 PF00111 2Fe-2S iron-sulfur cluster binding domain PN96_22830 PF00990 Diguanylate cyclase, GGDEF domain PN96_22830 PF17158 Membrane-associated sensor, integral membrane domain PN96_22835 PF13302 Acetyltransferase (GNAT) domain PN96_22840 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) PN96_22845 PF00582 Universal stress protein family PN96_22850 PF02525 Flavodoxin-like fold PN96_22855 PF00999 Sodium/hydrogen exchanger family PN96_22855 PF02254 TrkA-N domain PN96_22875 PF00128 Alpha amylase, catalytic domain PN96_22880 PF00465 Iron-containing alcohol dehydrogenase PN96_22885 PF01266 FAD dependent oxidoreductase PN96_22895 PF00202 Aminotransferase class-III PN96_22900 PF00171 Aldehyde dehydrogenase family PN96_22905 PF03480 Bacterial extracellular solute-binding protein, family 7 PN96_22915 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PN96_22935 PF00999 Sodium/hydrogen exchanger family PN96_22940 PF00842 Alanine racemase, C-terminal domain PN96_22940 PF01168 Alanine racemase, N-terminal domain PN96_22950 PF13378 Enolase C-terminal domain-like PN96_22950 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain PN96_22955 PF01063 Amino-transferase class IV PN96_22970 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PN96_22975 PF03466 LysR substrate binding domain PN96_22975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_22980 PF00107 Zinc-binding dehydrogenase PN96_22980 PF08240 Alcohol dehydrogenase GroES-like domain PN96_22985 PF03466 LysR substrate binding domain PN96_22985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_22995 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase PN96_23010 PF01844 HNH endonuclease PN96_23020 PF01584 CheW-like domain PN96_23020 PF00072 Response regulator receiver domain PN96_23025 PF01243 Pyridoxamine 5'-phosphate oxidase PN96_23060 PF01467 Cytidylyltransferase-like PN96_23065 PF02540 NAD synthase PN96_23070 PF03476 MOSC N-terminal beta barrel domain PN96_23070 PF03473 MOSC domain PN96_23070 PF00111 2Fe-2S iron-sulfur cluster binding domain PN96_23070 PF00111 2Fe-2S iron-sulfur cluster binding domain PN96_23070 PF03473 MOSC domain PN96_23070 PF03476 MOSC N-terminal beta barrel domain PN96_23080 PF01979 Amidohydrolase family PN96_23085 PF05661 Protein of unknown function (DUF808) PN96_23095 PF11490 DNA polymerase III polC-type N-terminus II PN96_23095 PF00929 Exonuclease PN96_23095 PF02811 PHP domain PN96_23095 PF14579 Helix-hairpin-helix motif PN96_23095 PF07733 Bacterial DNA polymerase III alpha NTPase domain PN96_23095 PF17657 Bacterial DNA polymerase III alpha subunit finger domain PN96_23110 PF00005 ABC transporter PN96_23110 PF00664 ABC transporter transmembrane region PN96_23120 PF12146 Serine aminopeptidase, S33 PN96_23125 PF12146 Serine aminopeptidase, S33 PN96_23130 PF03466 LysR substrate binding domain PN96_23130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PN96_23150 PF00990 Diguanylate cyclase, GGDEF domain PN96_23150 PF07694 5TMR of 5TMR-LYT PN96_23155 PF00011 Hsp20/alpha crystallin family PN96_23165 PF00743 Flavin-binding monooxygenase-like PN96_23170 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term PN96_23170 PF12833 Helix-turn-helix domain PN96_23175 PF02626 Carboxyltransferase domain, subdomain A and B PN96_23180 PF02682 Carboxyltransferase domain, subdomain C and D PN96_23185 PF03746 LamB/YcsF family PN96_23200 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PN96_23215 PF00155 Aminotransferase class I and II PN96_23225 PF01037 Lrp/AsnC ligand binding domain PN96_23230 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PN96_23230 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PN96_23245 PF12146 Serine aminopeptidase, S33 PN96_23245 PF16671 Actin cross-linking domain PN96_23245 PF07634 RtxA repeat PN96_23245 PF11647 Membrane Localization Domain PN96_23245 PF11713 Peptidase C80 family PN96_23255 PF01464 Transglycosylase SLT domain PN96_23255 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain PN96_23290 PF02028 BCCT, betaine/carnitine/choline family transporter PN96_23295 PF00072 Response regulator receiver domain PN96_23300 PF01627 Hpt domain PN96_23300 PF00512 His Kinase A (phospho-acceptor) domain PN96_23300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PN96_23300 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) PN96_23300 PF00072 Response regulator receiver domain PN96_23300 PF00672 HAMP domain PN96_23315 PF00528 Binding-protein-dependent transport system inner membrane component PN96_23320 PF14785 Maltose transport system permease protein MalF P2 domain PN96_23320 PF00528 Binding-protein-dependent transport system inner membrane component PN96_23325 PF01547 Bacterial extracellular solute-binding protein