locus-tag class description D3H41_00005 IPR020591 Chromosomal replication control, initiator DnaA-like D3H41_00005 IPR010921 Trp repressor/replication initiator D3H41_00005 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_00005 IPR038454 DnaA, N-terminal domain superfamily D3H41_00005 IPR024633 DnaA N-terminal domain D3H41_00005 IPR013159 Chromosomal replication initiator, DnaA C-terminal D3H41_00005 IPR013317 Chromosomal replication initiator protein DnaA D3H41_00005 IPR018312 Chromosomal replication control, initiator DnaA, conserved site D3H41_00005 IPR001957 Chromosomal replication control, initiator DnaA D3H41_00005 IPR003593 AAA+ ATPase domain D3H41_00010 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal D3H41_00010 IPR022637 DNA polymerase III, beta sliding clamp, central D3H41_00010 IPR001001 DNA polymerase III, beta sliding clamp D3H41_00010 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal D3H41_00015 IPR001238 DNA-binding, RecF D3H41_00015 IPR018078 DNA-binding, RecF, conserved site D3H41_00015 IPR042174 DNA-binding RecF, domain 2 D3H41_00015 IPR003395 RecF/RecN/SMC, N-terminal D3H41_00015 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_00020 IPR034160 DNA gyrase subunit B, TOPRIM domain D3H41_00020 IPR006171 TOPRIM domain D3H41_00020 IPR018522 DNA topoisomerase, type IIA, conserved site D3H41_00020 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 D3H41_00020 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal D3H41_00020 IPR013760 DNA topoisomerase, type IIA-like domain superfamily D3H41_00020 IPR002288 DNA gyrase B subunit, C-terminal D3H41_00020 IPR011557 DNA gyrase, subunit B D3H41_00020 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D3H41_00020 IPR020568 Ribosomal protein S5 domain 2-type fold D3H41_00020 IPR041423 DNA gyrase subunit B insert domain D3H41_00020 IPR003594 Histidine kinase/HSP90-like ATPase D3H41_00020 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3H41_00020 IPR001241 DNA topoisomerase, type IIA D3H41_00035 IPR002068 Alpha crystallin/Hsp20 domain D3H41_00035 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain D3H41_00035 IPR008978 HSP20-like chaperone D3H41_00035 IPR023728 Small heat shock protein IbpA D3H41_00040 IPR015424 Pyridoxal phosphate-dependent transferase D3H41_00040 IPR004839 Aminotransferase, class I/classII D3H41_00040 IPR015421 Pyridoxal phosphate-dependent transferase, major domain D3H41_00045 IPR014635 Alpha-amylase, MalS type D3H41_00045 IPR017853 Glycoside hydrolase superfamily D3H41_00045 IPR006047 Glycosyl hydrolase, family 13, catalytic domain D3H41_00050 IPR008909 DALR anticodon binding D3H41_00050 IPR006194 Glycine-tRNA synthetase, heterodimeric D3H41_00050 IPR015944 Glycine-tRNA ligase, beta subunit D3H41_00055 IPR006194 Glycine-tRNA synthetase, heterodimeric D3H41_00055 IPR002310 Glycine-tRNA ligase, alpha subunit D3H41_00060 IPR001727 Gdt1 family D3H41_00070 IPR001455 TusA-like domain D3H41_00070 IPR022931 Sulfur carrier protein TusA D3H41_00070 IPR036868 TusA-like domain superfamily D3H41_00080 IPR005119 LysR, substrate-binding D3H41_00080 IPR037402 HTH-type transcriptional regulator YidZ, PBP2 domain D3H41_00080 IPR036390 Winged helix DNA-binding domain superfamily D3H41_00080 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_00080 IPR023746 Transcription regulator HTH, YidZ D3H41_00080 IPR000847 Transcription regulator HTH, LysR D3H41_00085 IPR011032 GroES-like superfamily D3H41_00085 IPR013154 Alcohol dehydrogenase, N-terminal D3H41_00085 IPR013149 Alcohol dehydrogenase, C-terminal D3H41_00085 IPR014188 Acrylyl-CoA reductase AcuI D3H41_00085 IPR036291 NAD(P)-binding domain superfamily D3H41_00085 IPR020843 Polyketide synthase, enoylreductase domain D3H41_00090 IPR012805 Acetyl-CoA C-acyltransferase FadA D3H41_00090 IPR020615 Thiolase, acyl-enzyme intermediate active site D3H41_00090 IPR020613 Thiolase, conserved site D3H41_00090 IPR020617 Thiolase, C-terminal D3H41_00090 IPR016039 Thiolase-like D3H41_00090 IPR020610 Thiolase, active site D3H41_00090 IPR020616 Thiolase, N-terminal D3H41_00090 IPR002155 Thiolase D3H41_00095 IPR029045 ClpP/crotonase-like domain superfamily D3H41_00095 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site D3H41_00095 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal D3H41_00095 IPR036291 NAD(P)-binding domain superfamily D3H41_00095 IPR012799 Fatty oxidation complex, alpha subunit FadB D3H41_00095 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily D3H41_00095 IPR001753 Enoyl-CoA hydratase/isomerase D3H41_00095 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding D3H41_00100 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal D3H41_00100 IPR015796 Impact family, bacterial/archaeal D3H41_00100 IPR035647 EF-G domain III/V-like D3H41_00100 IPR023582 Impact family D3H41_00100 IPR001498 Impact, N-terminal D3H41_00100 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site D3H41_00100 IPR036956 Impact, N-terminal domain superfamily D3H41_00100 IPR020568 Ribosomal protein S5 domain 2-type fold D3H41_00105 IPR004772 TrkH potassium transport family D3H41_00105 IPR003445 Cation transporter D3H41_00110 IPR029039 Flavoprotein-like superfamily D3H41_00110 IPR026816 Flavodoxin domain D3H41_00110 IPR008254 Flavodoxin/nitric oxide synthase D3H41_00110 IPR001226 Flavodoxin, conserved site D3H41_00145 IPR036390 Winged helix DNA-binding domain superfamily D3H41_00145 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_00145 IPR000847 Transcription regulator HTH, LysR D3H41_00145 IPR005119 LysR, substrate-binding D3H41_00145 IPR037404 HTH-type transcriptional activator IlvY, PBP2 domain D3H41_00150 IPR000506 Ketol-acid reductoisomerase, C-terminal D3H41_00150 IPR013116 Ketol-acid reductoisomerase, N-terminal D3H41_00150 IPR013023 Ketol-acid reductoisomerase D3H41_00150 IPR013328 6-phosphogluconate dehydrogenase, domain 2 D3H41_00150 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily D3H41_00150 IPR036291 NAD(P)-binding domain superfamily D3H41_00155 IPR007475 Ubiquinone biosynthesis accessory factor UbiK D3H41_00160 IPR001036 Acriflavin resistance protein D3H41_00160 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D3H41_00165 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain D3H41_00165 IPR006143 RND efflux pump, membrane fusion protein D3H41_00170 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily D3H41_00170 IPR001647 DNA-binding HTH domain, TetR-type D3H41_00170 IPR009057 Homeobox-like domain superfamily D3H41_00170 IPR032551 HTH-type transcriptional repressor, C-terminal D3H41_00170 IPR023772 DNA-binding HTH domain, TetR-type, conserved site D3H41_00175 IPR013986 DExx box DNA helicase domain superfamily D3H41_00175 IPR034739 UvrD/AddA helicase, N-terminal D3H41_00175 IPR014017 UvrD-like DNA helicase, C-terminal D3H41_00175 IPR014016 UvrD-like helicase, ATP-binding domain D3H41_00175 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_00175 IPR005752 ATP-dependent DNA helicase Rep D3H41_00175 IPR000212 DNA helicase, UvrD/REP type D3H41_00180 IPR002323 Cytochrome c, class IE D3H41_00180 IPR009056 Cytochrome c-like domain D3H41_00180 IPR036909 Cytochrome c-like domain superfamily D3H41_00210 IPR036412 HAD-like superfamily D3H41_00210 IPR023198 Phosphoglycolate phosphatase-like, domain 2 D3H41_00210 IPR023214 HAD superfamily D3H41_00210 IPR041492 Haloacid dehalogenase-like hydrolase D3H41_00210 IPR006549 HAD-superfamily hydrolase,subfamily IIIA D3H41_00210 IPR023733 Pyrophosphatase PpaX D3H41_00210 IPR006439 HAD hydrolase, subfamily IA D3H41_00220 IPR003593 AAA+ ATPase domain D3H41_00220 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_00220 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal D3H41_00220 IPR017871 ABC transporter, conserved site D3H41_00220 IPR003439 ABC transporter-like D3H41_00225 IPR030678 Peptide/nickel binding protein, MppA-type D3H41_00225 IPR039424 Solute-binding protein family 5 D3H41_00225 IPR023765 Solute-binding protein family 5, conserved site D3H41_00225 IPR000914 Solute-binding protein family 5 domain D3H41_00235 IPR025966 Oligopeptide transport permease C-like, N-terminal domain D3H41_00235 IPR035906 MetI-like superfamily D3H41_00235 IPR000515 ABC transporter type 1, transmembrane domain MetI-like D3H41_00270 IPR008271 Serine/threonine-protein kinase, active site D3H41_00270 IPR011009 Protein kinase-like domain superfamily D3H41_00270 IPR000719 Protein kinase domain D3H41_00275 IPR001761 Periplasmic binding protein/LacI sugar binding domain D3H41_00275 IPR010982 Lambda repressor-like, DNA-binding domain superfamily D3H41_00275 IPR000843 LacI-type HTH domain D3H41_00275 IPR028082 Periplasmic binding protein-like I D3H41_00280 IPR005119 LysR, substrate-binding D3H41_00280 IPR000847 Transcription regulator HTH, LysR D3H41_00280 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_00280 IPR036390 Winged helix DNA-binding domain superfamily D3H41_00285 IPR000390 Small multidrug resistance protein family D3H41_00285 IPR023740 Spermidine export protein MdtJ D3H41_00290 IPR000390 Small multidrug resistance protein family D3H41_00290 IPR023737 Spermidine export protein MdtI D3H41_00295 IPR037237 IlvD/EDD, N-terminal domain D3H41_00295 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site D3H41_00295 IPR042096 Dihydroxy-acid dehydratase, C-terminal D3H41_00295 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase D3H41_00295 IPR004786 6-phosphogluconate dehydratase D3H41_00300 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_00300 IPR031322 Shikimate kinase/gluconokinase D3H41_00300 IPR006001 Carbohydrate kinase, thermoresistant glucokinase D3H41_00305 IPR003474 Gluconate transporter D3H41_00310 IPR000887 KDPG/KHG aldolase D3H41_00310 IPR013785 Aldolase-type TIM barrel D3H41_00310 IPR031337 KDPG/KHG aldolase, active site 1 D3H41_00310 IPR031338 KDPG/KHG aldolase, active site 2 D3H41_00315 IPR011268 Purine nucleoside phosphorylase D3H41_00315 IPR035994 Nucleoside phosphorylase superfamily D3H41_00315 IPR000845 Nucleoside phosphorylase domain D3H41_00315 IPR010943 Xanthosine phosphorylase D3H41_00315 IPR018099 Purine phosphorylase, family 2, conserved site D3H41_00320 IPR000847 Transcription regulator HTH, LysR D3H41_00320 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_00320 IPR036390 Winged helix DNA-binding domain superfamily D3H41_00320 IPR037411 HTH-type transcriptional regulator AlsR, PBP2 domain D3H41_00320 IPR005119 LysR, substrate-binding D3H41_00325 IPR023753 FAD/NAD(P)-binding domain D3H41_00325 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site D3H41_00325 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D3H41_00325 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I D3H41_00325 IPR006322 Glutathione reductase, eukaryote/bacterial D3H41_00325 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily D3H41_00325 IPR036188 FAD/NAD(P)-binding domain superfamily D3H41_00330 IPR002052 DNA methylase, N-6 adenine-specific, conserved site D3H41_00330 IPR007473 Ribosomal RNA large subunit methyltransferase J D3H41_00330 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3H41_00335 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 D3H41_00335 IPR001567 Peptidase M3A/M3B catalytic domain D3H41_00340 IPR011991 ArsR-like helix-turn-helix domain D3H41_00340 IPR011008 Dimeric alpha-beta barrel D3H41_00340 IPR019888 Transcription regulator AsnC-type D3H41_00340 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain D3H41_00340 IPR019885 Transcription regulator HTH, AsnC-type, conserved site D3H41_00340 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_00340 IPR036390 Winged helix DNA-binding domain superfamily D3H41_00340 IPR000485 AsnC-type HTH domain D3H41_00345 IPR001633 EAL domain D3H41_00345 IPR013656 PAS fold-4 D3H41_00345 IPR035965 PAS domain superfamily D3H41_00345 IPR000014 PAS domain D3H41_00345 IPR029787 Nucleotide cyclase D3H41_00345 IPR000160 GGDEF domain D3H41_00345 IPR035919 EAL domain superfamily D3H41_00350 IPR007536 Ribosomal RNA small subunit methyltransferase J D3H41_00350 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3H41_00360 IPR000620 EamA domain D3H41_00360 IPR004779 Carboxylate/Amino Acid/Amine Transporter D3H41_00365 IPR006015 Universal stress protein A family D3H41_00365 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3H41_00365 IPR006016 UspA D3H41_00370 IPR041719 Ferritin, prokaryotic-type D3H41_00370 IPR001519 Ferritin D3H41_00370 IPR012347 Ferritin-like D3H41_00370 IPR009040 Ferritin-like diiron domain D3H41_00370 IPR009078 Ferritin-like superfamily D3H41_00370 IPR008331 Ferritin/DPS protein domain D3H41_00375 IPR019598 Universal stress protein B D3H41_00380 IPR036188 FAD/NAD(P)-binding domain superfamily D3H41_00380 IPR023166 HI0933-like insert domain superfamily D3H41_00380 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like D3H41_00385 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_00385 IPR002197 DNA binding HTH domain, Fis-type D3H41_00385 IPR009057 Homeobox-like domain superfamily D3H41_00385 IPR003018 GAF domain D3H41_00385 IPR029016 GAF-like domain superfamily D3H41_00385 IPR025944 Sigma-54 interaction domain, conserved site D3H41_00385 IPR003593 AAA+ ATPase domain D3H41_00385 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 D3H41_00385 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 D3H41_00385 IPR002078 RNA polymerase sigma factor 54 interaction domain D3H41_00410 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal D3H41_00410 IPR005218 Diacylglycerol/lipid kinase D3H41_00410 IPR001206 Diacylglycerol kinase, catalytic domain D3H41_00410 IPR022433 Lipid kinase YegS D3H41_00410 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily D3H41_00440 IPR002549 Transmembrane protein TqsA-like D3H41_00445 IPR000160 GGDEF domain D3H41_00445 IPR005330 MHYT domain D3H41_00445 IPR029787 Nucleotide cyclase D3H41_00445 IPR035919 EAL domain superfamily D3H41_00445 IPR001633 EAL domain D3H41_00455 IPR003798 DNA recombination RmuC D3H41_00460 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3H41_00460 IPR004033 UbiE/COQ5 methyltransferase D3H41_00460 IPR023576 UbiE/COQ5 methyltransferase, conserved site D3H41_00465 IPR038989 Ubiquinone biosynthesis protein UbiJ D3H41_00465 IPR036527 SCP2 sterol-binding domain superfamily D3H41_00465 IPR003033 SCP2 sterol-binding domain D3H41_00470 IPR011009 Protein kinase-like domain superfamily D3H41_00470 IPR010232 Probable protein kinase UbiB D3H41_00470 IPR004147 UbiB domain D3H41_00475 IPR003369 Sec-independent protein translocase protein TatA/B/E D3H41_00475 IPR006312 Sec-independent protein translocase protein TatA/E D3H41_00480 IPR003369 Sec-independent protein translocase protein TatA/B/E D3H41_00480 IPR018448 Twin-arginine translocation protein TatB D3H41_00485 IPR019820 Sec-independent periplasmic protein translocase, conserved site D3H41_00485 IPR002033 Sec-independent periplasmic protein translocase TatC D3H41_00495 IPR015991 Uncharacterised hydrolase TatD-type D3H41_00495 IPR032466 Metal-dependent hydrolase D3H41_00495 IPR001130 TatD family D3H41_00495 IPR018228 Deoxyribonuclease, TatD-related, conserved site D3H41_00505 IPR001731 Delta-aminolevulinic acid dehydratase D3H41_00505 IPR013785 Aldolase-type TIM barrel D3H41_00505 IPR030656 Delta-aminolevulinic acid dehydratase, active site D3H41_00510 IPR000182 GNAT domain D3H41_00510 IPR016181 Acyl-CoA N-acyltransferase D3H41_00520 IPR018320 DNA polymerase 1 D3H41_00520 IPR002298 DNA polymerase A D3H41_00520 IPR008918 Helix-hairpin-helix motif, class 2 D3H41_00520 IPR001098 DNA-directed DNA polymerase, family A, palm domain D3H41_00520 IPR036397 Ribonuclease H superfamily D3H41_00520 IPR020045 DNA polymerase I-like, H3TH domain D3H41_00520 IPR002562 3'-5' exonuclease domain D3H41_00520 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal D3H41_00520 IPR002421 5'-3' exonuclease, N-terminal D3H41_00520 IPR036279 5'-3' exonuclease, C-terminal domain superfamily D3H41_00520 IPR019760 DNA-directed DNA polymerase, family A, conserved site D3H41_00520 IPR012337 Ribonuclease H-like superfamily D3H41_00520 IPR029060 PIN-like domain superfamily D3H41_00525 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_00525 IPR006073 GTP binding domain D3H41_00525 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC D3H41_00525 IPR030393 EngB-type guanine nucleotide-binding (G) domain D3H41_00530 IPR024167 Cytochrome c4-like D3H41_00530 IPR009056 Cytochrome c-like domain D3H41_00530 IPR036909 Cytochrome c-like domain superfamily D3H41_00545 IPR007336 Der GTPase activator D3H41_00550 IPR019617 Domain of unknown function DUF2489 D3H41_00555 IPR007197 Radical SAM D3H41_00555 IPR034505 Anaerobic coproporphyrinogen-III oxidase D3H41_00555 IPR023404 Radical SAM, alpha/beta horseshoe D3H41_00555 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN D3H41_00555 IPR010723 HemN, C-terminal D3H41_00555 IPR006638 Elp3/MiaB/NifB D3H41_00560 IPR032466 Metal-dependent hydrolase D3H41_00560 IPR006330 Adenosine/adenine deaminase D3H41_00560 IPR028893 Adenosine deaminase D3H41_00560 IPR001365 Adenosine/AMP deaminase domain D3H41_00565 IPR035919 EAL domain superfamily D3H41_00565 IPR000160 GGDEF domain D3H41_00565 IPR001633 EAL domain D3H41_00565 IPR005330 MHYT domain D3H41_00565 IPR029787 Nucleotide cyclase D3H41_00570 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 D3H41_00570 IPR002078 RNA polymerase sigma factor 54 interaction domain D3H41_00570 IPR001789 Signal transduction response regulator, receiver domain D3H41_00570 IPR003593 AAA+ ATPase domain D3H41_00570 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 D3H41_00570 IPR025944 Sigma-54 interaction domain, conserved site D3H41_00570 IPR011006 CheY-like superfamily D3H41_00570 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_00570 IPR010114 DNA-binding transcriptional regulator NtrC D3H41_00570 IPR002197 DNA binding HTH domain, Fis-type D3H41_00570 IPR009057 Homeobox-like domain superfamily D3H41_00575 IPR005467 Histidine kinase domain D3H41_00575 IPR003594 Histidine kinase/HSP90-like ATPase D3H41_00575 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily D3H41_00575 IPR013767 PAS fold D3H41_00575 IPR035965 PAS domain superfamily D3H41_00575 IPR004358 Signal transduction histidine kinase-related protein, C-terminal D3H41_00575 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain D3H41_00575 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3H41_00575 IPR000014 PAS domain D3H41_00585 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain D3H41_00585 IPR027303 Glutamine synthetase, glycine-rich site D3H41_00585 IPR004809 Glutamine synthetase type I D3H41_00585 IPR008147 Glutamine synthetase, beta-Grasp domain D3H41_00585 IPR027302 Glutamine synthetase, N-terminal conserved site D3H41_00585 IPR036651 Glutamine synthetase, N-terminal domain superfamily D3H41_00585 IPR008146 Glutamine synthetase, catalytic domain D3H41_00585 IPR001637 Glutamine synthetase class-I, adenylation site D3H41_00595 IPR018312 Chromosomal replication control, initiator DnaA, conserved site D3H41_00595 IPR001957 Chromosomal replication control, initiator DnaA D3H41_00595 IPR003593 AAA+ ATPase domain D3H41_00595 IPR013159 Chromosomal replication initiator, DnaA C-terminal D3H41_00595 IPR013317 Chromosomal replication initiator protein DnaA D3H41_00595 IPR038454 DnaA, N-terminal domain superfamily D3H41_00595 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_00595 IPR010921 Trp repressor/replication initiator D3H41_00595 IPR020591 Chromosomal replication control, initiator DnaA-like D3H41_00605 IPR023679 Uncharacterised protein family UPF0761, bacterial D3H41_00605 IPR017039 Virulence factor BrkB D3H41_00610 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily D3H41_00610 IPR003732 D-aminoacyl-tRNA deacylase DTD D3H41_00615 IPR000182 GNAT domain D3H41_00615 IPR029069 HotDog domain superfamily D3H41_00615 IPR012660 Thioesterase, putative D3H41_00615 IPR016181 Acyl-CoA N-acyltransferase D3H41_00625 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site D3H41_00625 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal D3H41_00625 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal D3H41_00625 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising D3H41_00630 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily D3H41_00630 IPR000397 Heat shock protein Hsp33 D3H41_00630 IPR016153 Heat shock protein Hsp33, N-terminal D3H41_00630 IPR016154 Heat shock protein Hsp33, C-terminal D3H41_00635 IPR002942 RNA-binding S4 domain D3H41_00635 IPR036986 RNA-binding S4 domain superfamily D3H41_00635 IPR025708 Heat shock protein 15 D3H41_00640 IPR001639 Type II secretion system protein C D3H41_00640 IPR036034 PDZ superfamily D3H41_00640 IPR024961 Type II secretion system protein C, N-terminal D3H41_00645 IPR013356 Type II secretion system GspD D3H41_00645 IPR004845 Type II secretion system GspD, conserved site D3H41_00645 IPR005644 NolW-like D3H41_00645 IPR001775 GspD/PilQ family D3H41_00645 IPR004846 Type II/III secretion system D3H41_00645 IPR038591 NolW-like superfamily D3H41_00650 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_00650 IPR037257 General secretory system II, protein E, N-terminal superfamily D3H41_00650 IPR042181 Type II secretion system, protein E, N-terminal D3H41_00650 IPR013369 Type II secretion system GspE D3H41_00650 IPR003593 AAA+ ATPase domain D3H41_00650 IPR001482 Type II/IV secretion system protein D3H41_00655 IPR018076 Type II secretion system F domain D3H41_00655 IPR042094 Type II secretion system F domain superfamily D3H41_00655 IPR003004 GspF/PilC family D3H41_00655 IPR011850 General secretion pathway protein F D3H41_00655 IPR001992 Type II secretion system conserved site D3H41_00660 IPR012902 Prokaryotic N-terminal methylation site D3H41_00660 IPR000983 Bacterial general secretion pathway protein G-type pilin D3H41_00660 IPR013545 Type II secretion system protein G D3H41_00660 IPR010054 General secretion pathway protein G D3H41_00665 IPR022346 General secretion pathway, GspH D3H41_00665 IPR002416 Type II secretion system protein H D3H41_00665 IPR012902 Prokaryotic N-terminal methylation site D3H41_00670 IPR012902 Prokaryotic N-terminal methylation site D3H41_00670 IPR003413 Type II secretion system protein I domain D3H41_00670 IPR010052 Type II secretion system protein I D3H41_00675 IPR012902 Prokaryotic N-terminal methylation site D3H41_00675 IPR010055 Type II secretion system protein J D3H41_00680 IPR005628 General secretion pathway protein K D3H41_00680 IPR038072 GspK, central domain superfamily D3H41_00685 IPR025691 GspL periplasmic domain D3H41_00685 IPR007812 Type II secretion system protein L D3H41_00685 IPR024230 GspL, cytoplasmic actin-ATPase-like domain D3H41_00690 IPR007690 Type II secretion system, protein M D3H41_00690 IPR023229 Type II secretion system protein M, periplasmic domain superfamily D3H41_00695 IPR000645 Type II secretion system protein N, conserved site D3H41_00695 IPR022792 Type II secretion system, protein N D3H41_00700 IPR020583 Inositol monophosphatase, metal-binding site D3H41_00700 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ D3H41_00700 IPR000760 Inositol monophosphatase-like D3H41_00700 IPR020550 Inositol monophosphatase, conserved site D3H41_00705 IPR020084 NUDIX hydrolase, conserved site D3H41_00705 IPR015797 NUDIX hydrolase-like domain superfamily D3H41_00705 IPR000086 NUDIX hydrolase domain D3H41_00710 IPR000361 FeS cluster biogenesis D3H41_00710 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal D3H41_00710 IPR035903 HesB-like domain superfamily D3H41_00710 IPR017726 Fe/S biogenesis protein NfuA D3H41_00710 IPR034904 Fe-S cluster assembly domain superfamily D3H41_00715 IPR029057 Phosphoribosyltransferase-like D3H41_00715 IPR000836 Phosphoribosyltransferase domain D3H41_00715 IPR005222 Competence protein ComF D3H41_00720 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase D3H41_00720 IPR000073 Alpha/beta hydrolase fold-1 D3H41_00720 IPR029058 Alpha/Beta hydrolase fold D3H41_00730 IPR012337 Ribonuclease H-like superfamily D3H41_00730 IPR010994 RuvA domain 2-like D3H41_00730 IPR022967 RNA-binding domain, S1 D3H41_00730 IPR003029 S1 domain D3H41_00730 IPR012340 Nucleic acid-binding, OB-fold D3H41_00730 IPR023323 Tex-like domain superfamily D3H41_00730 IPR032639 Tex protein, YqgF-like domain D3H41_00730 IPR006641 YqgF/RNase H-like domain D3H41_00730 IPR041692 HHH domain 9 D3H41_00730 IPR018974 Tex-like protein, N-terminal D3H41_00730 IPR023319 Tex-like protein, HTH domain superfamily D3H41_00730 IPR037027 YqgF/RNase H-like domain superfamily D3H41_00740 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal D3H41_00740 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily D3H41_00740 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal D3H41_00740 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily D3H41_00740 IPR018151 Transcription elongation factor, GreA/GreB, conserved site D3H41_00740 IPR028624 Transcription elongation factor GreA/GreB D3H41_00740 IPR023459 Transcription elongation factor GreA/GreB family D3H41_00740 IPR006358 Transcription elongation factor GreB D3H41_00750 IPR001789 Signal transduction response regulator, receiver domain D3H41_00750 IPR039420 Transcriptional regulatory protein WalR-like D3H41_00750 IPR011006 CheY-like superfamily D3H41_00750 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_00750 IPR016032 Signal transduction response regulator, C-terminal effector D3H41_00750 IPR001867 OmpR/PhoB-type DNA-binding domain D3H41_00755 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily D3H41_00755 IPR004358 Signal transduction histidine kinase-related protein, C-terminal D3H41_00755 IPR003594 Histidine kinase/HSP90-like ATPase D3H41_00755 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3H41_00755 IPR003660 HAMP domain D3H41_00755 IPR005467 Histidine kinase domain D3H41_00755 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain D3H41_00760 IPR006043 Xanthine/uracil/vitamin C permease D3H41_00760 IPR006042 Xanthine/uracil permease D3H41_00765 IPR001650 Helicase, C-terminal D3H41_00765 IPR014001 Helicase superfamily 1/2, ATP-binding domain D3H41_00765 IPR012340 Nucleic acid-binding, OB-fold D3H41_00765 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_00765 IPR033454 RecG, wedge domain D3H41_00765 IPR011545 DEAD/DEAH box helicase domain D3H41_00765 IPR004609 ATP-dependent DNA helicase RecG D3H41_00770 IPR029028 Alpha/beta knot methyltransferases D3H41_00770 IPR001537 tRNA/rRNA methyltransferase, SpoU type D3H41_00770 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase D3H41_00770 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal D3H41_00770 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal D3H41_00775 IPR012675 Beta-grasp domain superfamily D3H41_00775 IPR003607 HD/PDEase domain D3H41_00775 IPR002912 ACT domain D3H41_00775 IPR004811 RelA/SpoT family D3H41_00775 IPR007685 RelA/SpoT D3H41_00775 IPR004095 TGS D3H41_00775 IPR012676 TGS-like D3H41_00775 IPR033655 RelA, TGS domain D3H41_00780 IPR012293 RNA polymerase subunit, RPB6/omega D3H41_00780 IPR036161 RPB6/omega subunit-like superfamily D3H41_00780 IPR006110 RNA polymerase, subunit omega/K/RPB6 D3H41_00780 IPR003716 DNA-directed RNA polymerase, omega subunit D3H41_00785 IPR017665 Guanylate kinase D3H41_00785 IPR008144 Guanylate kinase-like domain D3H41_00785 IPR020590 Guanylate kinase, conserved site D3H41_00785 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_00785 IPR008145 Guanylate kinase/L-type calcium channel beta subunit D3H41_00805 IPR003400 Biopolymer transport protein ExbD/TolR D3H41_00810 IPR002898 MotA/TolQ/ExbB proton channel D3H41_00825 IPR000531 TonB-dependent receptor-like, beta-barrel D3H41_00825 IPR010101 TonB-dependent vitamin B12 transporter BtuB D3H41_00825 IPR010917 TonB-dependent receptor, conserved site D3H41_00825 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D3H41_00825 IPR010916 TonB box, conserved site D3H41_00825 IPR039426 Vitamin B12 transporter BtuB-like D3H41_00825 IPR037066 TonB-dependent receptor, plug domain superfamily D3H41_00825 IPR012910 TonB-dependent receptor, plug domain D3H41_00835 IPR035906 MetI-like superfamily D3H41_00835 IPR000515 ABC transporter type 1, transmembrane domain MetI-like D3H41_00840 IPR025966 Oligopeptide transport permease C-like, N-terminal domain D3H41_00840 IPR035906 MetI-like superfamily D3H41_00840 IPR000515 ABC transporter type 1, transmembrane domain MetI-like D3H41_00845 IPR023765 Solute-binding protein family 5, conserved site D3H41_00845 IPR030678 Peptide/nickel binding protein, MppA-type D3H41_00845 IPR000914 Solute-binding protein family 5 domain D3H41_00845 IPR039424 Solute-binding protein family 5 D3H41_00850 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal D3H41_00850 IPR003439 ABC transporter-like D3H41_00850 IPR003593 AAA+ ATPase domain D3H41_00850 IPR017871 ABC transporter, conserved site D3H41_00850 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_00855 IPR003593 AAA+ ATPase domain D3H41_00855 IPR003439 ABC transporter-like D3H41_00855 IPR017871 ABC transporter, conserved site D3H41_00855 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal D3H41_00855 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_00865 IPR035965 PAS domain superfamily D3H41_00865 IPR000014 PAS domain D3H41_00865 IPR029787 Nucleotide cyclase D3H41_00865 IPR035919 EAL domain superfamily D3H41_00865 IPR001633 EAL domain D3H41_00865 IPR000160 GGDEF domain D3H41_00900 IPR013551 Domain of unknown function DUF1732 D3H41_00900 IPR013527 YicC-like, N-terminal D3H41_00900 IPR005229 Conserved hypothetical protein CHP00255 D3H41_00910 IPR015847 Exoribonuclease, phosphorolytic domain 2 D3H41_00910 IPR001247 Exoribonuclease, phosphorolytic domain 1 D3H41_00910 IPR036345 Exoribonuclease, PH domain 2 superfamily D3H41_00910 IPR027408 PNPase/RNase PH domain superfamily D3H41_00910 IPR020568 Ribosomal protein S5 domain 2-type fold D3H41_00910 IPR018336 Ribonuclease PH, conserved site D3H41_00910 IPR002381 Ribonuclease PH, bacterial-type D3H41_00920 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase D3H41_00920 IPR004960 Bacterial lipid A biosynthesis acyltransferase D3H41_00925 IPR009057 Homeobox-like domain superfamily D3H41_00925 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily D3H41_00925 IPR023769 Nucleoid occlusion factor SlmA D3H41_00925 IPR001647 DNA-binding HTH domain, TetR-type D3H41_00930 IPR035929 CoaB-like superfamily D3H41_00930 IPR003382 Flavoprotein D3H41_00930 IPR036551 Flavin prenyltransferase-like D3H41_00930 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC D3H41_00930 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal D3H41_00940 IPR003660 HAMP domain D3H41_00940 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain D3H41_00940 IPR033480 Single Cache domain 2 D3H41_00940 IPR004090 Chemotaxis methyl-accepting receptor D3H41_00945 IPR020891 Uncharacterised protein family UPF0758, conserved site D3H41_00945 IPR037518 MPN domain D3H41_00945 IPR025657 RadC-like JAB domain D3H41_00945 IPR001405 Uncharacterised protein family UPF0758 D3H41_00945 IPR010994 RuvA domain 2-like D3H41_00950 IPR026569 Ribosomal protein L28/L24 D3H41_00950 IPR034704 L28p-like D3H41_00950 IPR001383 Ribosomal protein L28 D3H41_00950 IPR037147 Ribosomal protein L28/L24 superfamily D3H41_00955 IPR038584 Ribosomal protein L33 superfamily D3H41_00955 IPR018264 Ribosomal protein L33, conserved site D3H41_00955 IPR011332 Zinc-binding ribosomal protein D3H41_00955 IPR001705 Ribosomal protein L33 D3H41_00965 IPR010979 Ribosomal protein S13-like, H2TH D3H41_00965 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site D3H41_00965 IPR020629 Formamidopyrimidine-DNA glycosylase D3H41_00965 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type D3H41_00965 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding D3H41_00965 IPR010663 Zinc finger, FPG/IleRS-type D3H41_00965 IPR035937 MutM-like, N-terminal D3H41_00965 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain D3H41_00970 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3H41_00970 IPR001980 Phosphopantetheine adenylyltransferase D3H41_00970 IPR004821 Cytidyltransferase-like domain D3H41_00975 IPR006598 Glycosyl transferase CAP10 domain D3H41_00980 IPR001173 Glycosyltransferase 2-like D3H41_00980 IPR029044 Nucleotide-diphospho-sugar transferases D3H41_00985 IPR001173 Glycosyltransferase 2-like D3H41_00985 IPR029044 Nucleotide-diphospho-sugar transferases D3H41_00990 IPR002201 Glycosyl transferase, family 9 D3H41_00995 IPR000829 DAGK family D3H41_00995 IPR033718 Diacylglycerol kinase, prokaryotic D3H41_00995 IPR036945 Diacylglycerol kinase (DAGK) superfamily D3H41_01000 IPR000719 Protein kinase domain D3H41_01000 IPR011009 Protein kinase-like domain superfamily D3H41_01000 IPR022826 3-deoxy-D-manno-octulosonic acid kinase D3H41_01005 IPR036291 NAD(P)-binding domain superfamily D3H41_01005 IPR016040 NAD(P)-binding domain D3H41_01005 IPR005888 dTDP-glucose 4,6-dehydratase D3H41_01010 IPR005835 Nucleotidyl transferase domain D3H41_01010 IPR029044 Nucleotide-diphospho-sugar transferases D3H41_01010 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form D3H41_01015 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase D3H41_01015 IPR015424 Pyridoxal phosphate-dependent transferase D3H41_01015 IPR015421 Pyridoxal phosphate-dependent transferase, major domain D3H41_01020 IPR001031 Thioesterase D3H41_01020 IPR000873 AMP-dependent synthetase/ligase D3H41_01020 IPR020845 AMP-binding, conserved site D3H41_01020 IPR025110 AMP-binding enzyme, C-terminal domain D3H41_01020 IPR036736 ACP-like superfamily D3H41_01020 IPR029058 Alpha/Beta hydrolase fold D3H41_01020 IPR010071 Amino acid adenylation domain D3H41_01020 IPR001242 Condensation domain D3H41_01020 IPR020806 Polyketide synthase, phosphopantetheine-binding domain D3H41_01020 IPR009081 Phosphopantetheine binding ACP domain D3H41_01020 IPR006162 Phosphopantetheine attachment site D3H41_01020 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily D3H41_01020 IPR042099 AMP-dependent synthetase-like superfamily D3H41_01030 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 D3H41_01030 IPR016039 Thiolase-like D3H41_01030 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal D3H41_01030 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D3H41_01040 IPR002347 Short-chain dehydrogenase/reductase SDR D3H41_01040 IPR020904 Short-chain dehydrogenase/reductase, conserved site D3H41_01040 IPR036291 NAD(P)-binding domain superfamily D3H41_01040 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase D3H41_01045 IPR036477 Formyl transferase, N-terminal domain superfamily D3H41_01045 IPR005794 Methionyl-tRNA formyltransferase D3H41_01045 IPR005793 Formyl transferase, C-terminal D3H41_01045 IPR002376 Formyl transferase, N-terminal D3H41_01045 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain D3H41_01045 IPR011034 Formyl transferase-like, C-terminal domain superfamily D3H41_01055 IPR029044 Nucleotide-diphospho-sugar transferases D3H41_01055 IPR001173 Glycosyltransferase 2-like D3H41_01060 IPR001296 Glycosyl transferase, family 1 D3H41_01060 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal D3H41_01060 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily D3H41_01060 IPR039901 3-deoxy-D-manno-octulosonic acid transferase D3H41_01065 IPR002201 Glycosyl transferase, family 9 D3H41_01065 IPR011910 ADP-heptose--LPS heptosyltransferase 2 D3H41_01075 IPR004960 Bacterial lipid A biosynthesis acyltransferase D3H41_01075 IPR011921 Lipid A biosynthesis myristoyltransferase D3H41_01080 IPR001509 NAD-dependent epimerase/dehydratase D3H41_01080 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase D3H41_01080 IPR036291 NAD(P)-binding domain superfamily D3H41_01085 IPR010344 Exopolysaccharide biosynthesis protein YbjH D3H41_01120 IPR029044 Nucleotide-diphospho-sugar transferases D3H41_01120 IPR003329 Acylneuraminate cytidylyltransferase D3H41_01125 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily D3H41_01125 IPR013974 SAF domain D3H41_01125 IPR013132 N-acetylneuraminic acid synthase, N-terminal D3H41_01125 IPR013785 Aldolase-type TIM barrel D3H41_01125 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal D3H41_01130 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain D3H41_01130 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like D3H41_01130 IPR020004 UDP-N-acetylglucosamine 2-epimerase,UDP-hydrolysing D3H41_01140 IPR002797 Polysaccharide biosynthesis protein D3H41_01155 IPR001173 Glycosyltransferase 2-like D3H41_01155 IPR029044 Nucleotide-diphospho-sugar transferases D3H41_01160 IPR036291 NAD(P)-binding domain superfamily D3H41_01160 IPR001509 NAD-dependent epimerase/dehydratase D3H41_01165 IPR003362 Bacterial sugar transferase D3H41_01165 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase D3H41_01165 IPR017472 Undecaprenyl-phosphate galactose phosphotransferase, WbaP D3H41_01170 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3H41_01170 IPR036291 NAD(P)-binding domain superfamily D3H41_01170 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain D3H41_01175 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation D3H41_01175 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily D3H41_01175 IPR017476 UDP-glucose/GDP-mannose dehydrogenase D3H41_01175 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal D3H41_01175 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily D3H41_01175 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal D3H41_01175 IPR036291 NAD(P)-binding domain superfamily D3H41_01175 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type D3H41_01180 IPR005835 Nucleotidyl transferase domain D3H41_01180 IPR029044 Nucleotide-diphospho-sugar transferases D3H41_01180 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type D3H41_01185 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain D3H41_01185 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like D3H41_01185 IPR001279 Metallo-beta-lactamase D3H41_01185 IPR022712 Beta-Casp domain D3H41_01190 IPR013785 Aldolase-type TIM barrel D3H41_01190 IPR035990 Triosephosphate isomerase superfamily D3H41_01190 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic D3H41_01190 IPR000652 Triosephosphate isomerase D3H41_01190 IPR020861 Triosephosphate isomerase, active site D3H41_01215 IPR014036 DeoR C-terminal sensor domain D3H41_01215 IPR036390 Winged helix DNA-binding domain superfamily D3H41_01215 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_01215 IPR001034 DeoR-type HTH domain D3H41_01215 IPR018356 Transcription regulator, HTH DeoR-type, conserved site D3H41_01215 IPR037171 NagB/RpiA transferase-like D3H41_01220 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase D3H41_01225 IPR009252 Cell division protein ZapB D3H41_01230 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria D3H41_01230 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily D3H41_01230 IPR010203 Regulator of ribonuclease activity A D3H41_01230 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein D3H41_01235 IPR000537 UbiA prenyltransferase family D3H41_01235 IPR026046 UbiA prenyltransferase domain containing protein 1 D3H41_01235 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase D3H41_01240 IPR003593 AAA+ ATPase domain D3H41_01240 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_01240 IPR004491 Heat shock protein HslU D3H41_01240 IPR019489 Clp ATPase, C-terminal D3H41_01240 IPR003959 ATPase, AAA-type, core D3H41_01245 IPR023333 Proteasome B-type subunit D3H41_01245 IPR029055 Nucleophile aminohydrolases, N-terminal D3H41_01245 IPR022281 ATP-dependent protease, HslV subunit D3H41_01245 IPR001353 Proteasome, subunit alpha/beta D3H41_01255 IPR028082 Periplasmic binding protein-like I D3H41_01255 IPR000843 LacI-type HTH domain D3H41_01255 IPR010982 Lambda repressor-like, DNA-binding domain superfamily D3H41_01260 IPR041236 Primosomal protein N, C-terminal domain D3H41_01260 IPR011545 DEAD/DEAH box helicase domain D3H41_01260 IPR014001 Helicase superfamily 1/2, ATP-binding domain D3H41_01260 IPR001650 Helicase, C-terminal D3H41_01260 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_01260 IPR005259 Primosomal protein N' D3H41_01260 IPR041222 Primosomal protein N', 3' DNA-binding domain D3H41_01260 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily D3H41_01260 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain D3H41_01270 IPR034704 L28p-like D3H41_01270 IPR002150 Ribosomal protein L31 D3H41_01270 IPR027491 Ribosomal protein L31 type A D3H41_01270 IPR042105 Ribosomal protein L31 superfamily D3H41_01275 IPR001848 Ribosomal protein S10 D3H41_01275 IPR027486 Ribosomal protein S10 domain D3H41_01275 IPR018268 Ribosomal protein S10, conserved site D3H41_01275 IPR036838 Ribosomal protein S10 domain superfamily D3H41_01280 IPR019927 Ribosomal protein L3, bacterial/organelle-type D3H41_01280 IPR019926 Ribosomal protein L3, conserved site D3H41_01280 IPR000597 Ribosomal protein L3 D3H41_01280 IPR009000 Translation protein, beta-barrel domain superfamily D3H41_01285 IPR013005 50S ribosomal protein uL4 D3H41_01285 IPR002136 Ribosomal protein L4/L1e D3H41_01285 IPR023574 Ribosomal protein L4 domain superfamily D3H41_01290 IPR001014 Ribosomal protein L23/L25, conserved site D3H41_01290 IPR013025 Ribosomal protein L25/L23 D3H41_01290 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily D3H41_01290 IPR012678 Ribosomal protein L23/L15e core domain superfamily D3H41_01295 IPR014726 Ribosomal protein L2, domain 3 D3H41_01295 IPR012340 Nucleic acid-binding, OB-fold D3H41_01295 IPR022666 Ribosomal Proteins L2, RNA binding domain D3H41_01295 IPR014722 Ribosomal protein L2, domain 2 D3H41_01295 IPR002171 Ribosomal protein L2 D3H41_01295 IPR005880 Ribosomal protein L2, bacterial/organellar-type D3H41_01295 IPR022669 Ribosomal protein L2, C-terminal D3H41_01295 IPR022671 Ribosomal protein L2, conserved site D3H41_01295 IPR008991 Translation protein SH3-like domain superfamily D3H41_01300 IPR005732 Ribosomal protein S19, bacterial-type D3H41_01300 IPR002222 Ribosomal protein S19/S15 D3H41_01300 IPR020934 Ribosomal protein S19 conserved site D3H41_01300 IPR023575 Ribosomal protein S19, superfamily D3H41_01305 IPR001063 Ribosomal protein L22/L17 D3H41_01305 IPR018260 Ribosomal protein L22/L17, conserved site D3H41_01305 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type D3H41_01305 IPR036394 Ribosomal protein L22/L17 superfamily D3H41_01310 IPR001351 Ribosomal protein S3, C-terminal D3H41_01310 IPR036419 Ribosomal protein S3, C-terminal domain superfamily D3H41_01310 IPR018280 Ribosomal protein S3, conserved site D3H41_01310 IPR004087 K Homology domain D3H41_01310 IPR015946 K homology domain-like, alpha/beta D3H41_01310 IPR005704 Ribosomal protein S3, bacterial-type D3H41_01310 IPR004044 K Homology domain, type 2 D3H41_01310 IPR009019 K homology domain superfamily, prokaryotic type D3H41_01315 IPR016180 Ribosomal protein L10e/L16 D3H41_01315 IPR036920 Ribosomal protein L10e/L16 superfamily D3H41_01315 IPR000114 Ribosomal protein L16 D3H41_01315 IPR020798 Ribosomal protein L16, conserved site D3H41_01320 IPR001854 Ribosomal protein L29/L35 D3H41_01320 IPR036049 Ribosomal protein L29/L35 superfamily D3H41_01320 IPR018254 Ribosomal protein L29, conserved site D3H41_01325 IPR012340 Nucleic acid-binding, OB-fold D3H41_01325 IPR019984 30S ribosomal protein S17 D3H41_01325 IPR000266 Ribosomal protein S17/S11 D3H41_01325 IPR019979 Ribosomal protein S17, conserved site D3H41_01330 IPR019972 Ribosomal protein L14P, conserved site D3H41_01330 IPR036853 Ribosomal protein L14 superfamily D3H41_01330 IPR000218 Ribosomal protein L14P D3H41_01330 IPR005745 Ribosomal protein L14P, bacterial-type D3H41_01335 IPR005825 Ribosomal protein L24/L26, conserved site D3H41_01335 IPR003256 Ribosomal protein L24 D3H41_01335 IPR014722 Ribosomal protein L2, domain 2 D3H41_01335 IPR041988 Ribosomal Protein L26/L24, KOW domain D3H41_01335 IPR005824 KOW D3H41_01335 IPR008991 Translation protein SH3-like domain superfamily D3H41_01340 IPR020929 Ribosomal protein L5, conserved site D3H41_01340 IPR031310 Ribosomal protein L5, N-terminal D3H41_01340 IPR022803 Ribosomal protein L5 domain superfamily D3H41_01340 IPR002132 Ribosomal protein L5 D3H41_01340 IPR020930 Ribosomal protein L5, bacterial-type D3H41_01340 IPR031309 Ribosomal protein L5, C-terminal D3H41_01345 IPR001209 Ribosomal protein S14 D3H41_01345 IPR023036 Ribosomal protein S14, bacterial/plastid D3H41_01345 IPR018271 Ribosomal protein S14, conserved site D3H41_01350 IPR035987 Ribosomal protein S8 superfamily D3H41_01350 IPR000630 Ribosomal protein S8 D3H41_01355 IPR000702 Ribosomal protein L6 D3H41_01355 IPR020040 Ribosomal protein L6, alpha-beta domain D3H41_01355 IPR002358 Ribosomal protein L6, conserved site D3H41_01355 IPR019906 Ribosomal protein L6, bacterial-type D3H41_01355 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily D3H41_01360 IPR004389 Ribosomal protein L18, bacterial-type D3H41_01360 IPR005484 Ribosomal protein L18 D3H41_01365 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D3H41_01365 IPR018192 Ribosomal protein S5, N-terminal, conserved site D3H41_01365 IPR000851 Ribosomal protein S5 D3H41_01365 IPR020568 Ribosomal protein S5 domain 2-type fold D3H41_01365 IPR005324 Ribosomal protein S5, C-terminal D3H41_01365 IPR005712 Ribosomal protein S5, bacterial-type D3H41_01365 IPR013810 Ribosomal protein S5, N-terminal D3H41_01370 IPR018038 Ribosomal protein L30, conserved site D3H41_01370 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily D3H41_01370 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain D3H41_01370 IPR005996 Ribosomal protein L30, bacterial-type D3H41_01380 IPR026593 Protein translocase subunit SecY D3H41_01380 IPR002208 SecY/SEC61-alpha family D3H41_01380 IPR030659 SecY conserved site D3H41_01380 IPR023201 SecY domain superfamily D3H41_01385 IPR035977 Ribosomal protein L36 superfamily D3H41_01385 IPR000473 Ribosomal protein L36 D3H41_01390 IPR018269 Ribosomal protein S13, conserved site D3H41_01390 IPR010979 Ribosomal protein S13-like, H2TH D3H41_01390 IPR001892 Ribosomal protein S13 D3H41_01390 IPR027437 30s ribosomal protein S13, C-terminal D3H41_01390 IPR019980 Ribosomal protein S13, bacterial-type D3H41_01395 IPR001971 Ribosomal protein S11 D3H41_01395 IPR019981 Ribosomal protein S11, bacterial-type D3H41_01395 IPR018102 Ribosomal S11, conserved site D3H41_01395 IPR036967 Ribosomal protein S11 superfamily D3H41_01400 IPR036986 RNA-binding S4 domain superfamily D3H41_01400 IPR002942 RNA-binding S4 domain D3H41_01400 IPR018079 Ribosomal protein S4, conserved site D3H41_01400 IPR005709 Ribosomal protein S4, bacterial-type D3H41_01400 IPR001912 Ribosomal protein S4/S9, N-terminal D3H41_01400 IPR022801 Ribosomal protein S4/S9 D3H41_01405 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type D3H41_01405 IPR011262 DNA-directed RNA polymerase, insert domain D3H41_01405 IPR011773 DNA-directed RNA polymerase, alpha subunit D3H41_01405 IPR036603 RNA polymerase, RBP11-like subunit D3H41_01405 IPR011260 RNA polymerase, alpha subunit, C-terminal D3H41_01405 IPR036643 DNA-directed RNA polymerase, insert domain superfamily D3H41_01410 IPR000456 Ribosomal protein L17 D3H41_01410 IPR036373 Ribosomal protein L17 superfamily D3H41_01420 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily D3H41_01420 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal D3H41_01420 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain D3H41_01430 IPR016181 Acyl-CoA N-acyltransferase D3H41_01430 IPR000182 GNAT domain D3H41_01435 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain D3H41_01435 IPR011545 DEAD/DEAH box helicase domain D3H41_01435 IPR028619 ATP-dependent RNA helicase DbpA D3H41_01435 IPR014001 Helicase superfamily 1/2, ATP-binding domain D3H41_01435 IPR001650 Helicase, C-terminal D3H41_01435 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily D3H41_01435 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_01435 IPR014014 RNA helicase, DEAD-box type, Q motif D3H41_01435 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site D3H41_01445 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase D3H41_01445 IPR029052 Metallo-dependent phosphatase-like D3H41_01445 IPR041827 CpdB, N-terminal metallophosphatase domain D3H41_01445 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type D3H41_01445 IPR006179 5'-Nucleotidase/apyrase D3H41_01445 IPR008334 5'-Nucleotidase, C-terminal D3H41_01445 IPR006146 5'-Nucleotidase, conserved site D3H41_01445 IPR036907 5'-Nucleotidase, C-terminal domain superfamily D3H41_01450 IPR036291 NAD(P)-binding domain superfamily D3H41_01450 IPR006367 Sirohaem synthase, N-terminal D3H41_01450 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site D3H41_01450 IPR028281 Siroheme synthase, central domain D3H41_01450 IPR012409 Sirohaem synthase D3H41_01450 IPR000878 Tetrapyrrole methylase D3H41_01450 IPR035996 Tetrapyrrole methylase superfamily D3H41_01450 IPR014777 Tetrapyrrole methylase, subdomain 1 D3H41_01450 IPR014776 Tetrapyrrole methylase, subdomain 2 D3H41_01450 IPR006366 Uroporphyrin-III C-methyltransferase D3H41_01450 IPR019478 Sirohaem synthase, dimerisation domain D3H41_01450 IPR037115 Sirohaem synthase, dimerisation domain superfamily D3H41_01455 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3H41_01455 IPR011784 Sulphate adenylyltransferase, small subunit D3H41_01455 IPR002500 Phosphoadenosine phosphosulphate reductase D3H41_01460 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal D3H41_01460 IPR031157 Tr-type G domain, conserved site D3H41_01460 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_01460 IPR005225 Small GTP-binding protein domain D3H41_01460 IPR011779 Sulphate adenylyltransferase, large subunit D3H41_01460 IPR000795 Transcription factor, GTP-binding domain D3H41_01460 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain D3H41_01460 IPR009000 Translation protein, beta-barrel domain superfamily D3H41_01465 IPR004680 Citrate transporter-like domain D3H41_01465 IPR031312 Sodium/sulphate symporter, conserved site D3H41_01465 IPR006037 Regulator of K+ conductance, C-terminal D3H41_01465 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily D3H41_01470 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_01470 IPR002891 Adenylyl-sulfate kinase D3H41_01490 IPR017871 ABC transporter, conserved site D3H41_01490 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_01490 IPR003439 ABC transporter-like D3H41_01490 IPR003593 AAA+ ATPase domain D3H41_01500 IPR019731 Protein of unknown function DUF2607 D3H41_01505 IPR006513 Conserved hypothetical protein CHP01626, YtfJ D3H41_01510 IPR009491 Protein of unknown function DUF1107 D3H41_01515 IPR002569 Peptide methionine sulphoxide reductase MsrA D3H41_01515 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily D3H41_01520 IPR039910 Surface antigen D15-like D3H41_01520 IPR000184 Bacterial surface antigen (D15) D3H41_01520 IPR034746 POTRA domain D3H41_01520 IPR035243 TamA, POTRA domain 1 D3H41_01520 IPR010827 POTRA domain, BamA/TamA-like D3H41_01525 IPR007452 Translocation and assembly module TamB D3H41_01530 IPR013024 Gamma-glutamyl cyclotransferase-like D3H41_01530 IPR039126 Gamma-glutamylaminecyclotransferase D3H41_01530 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like D3H41_01530 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily D3H41_01540 IPR008162 Inorganic pyrophosphatase D3H41_01540 IPR036649 Inorganic pyrophosphatase superfamily D3H41_01545 IPR020548 Fructose-1,6-bisphosphatase, active site D3H41_01545 IPR000146 Fructose-1,6-bisphosphatase class 1 D3H41_01545 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal D3H41_01545 IPR028343 Fructose-1,6-bisphosphatase D3H41_01555 IPR000713 Mur ligase, N-terminal catalytic domain D3H41_01555 IPR005757 Murein peptide ligase D3H41_01555 IPR036615 Mur ligase, C-terminal domain superfamily D3H41_01555 IPR004101 Mur ligase, C-terminal D3H41_01555 IPR036565 Mur-like, catalytic domain superfamily D3H41_01555 IPR013221 Mur ligase, central D3H41_01560 IPR036551 Flavin prenyltransferase-like D3H41_01560 IPR003382 Flavoprotein D3H41_01560 IPR004507 Flavin prenyltransferase UbiX-like D3H41_01565 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter D3H41_01565 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria D3H41_01565 IPR006061 Solute-binding family 1, conserved site D3H41_01570 IPR035906 MetI-like superfamily D3H41_01570 IPR000515 ABC transporter type 1, transmembrane domain MetI-like D3H41_01570 IPR005947 Thiamine ABC transporter, permease protein D3H41_01575 IPR017871 ABC transporter, conserved site D3H41_01575 IPR003593 AAA+ ATPase domain D3H41_01575 IPR003439 ABC transporter-like D3H41_01575 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ D3H41_01575 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_01580 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_01580 IPR000847 Transcription regulator HTH, LysR D3H41_01580 IPR005119 LysR, substrate-binding D3H41_01580 IPR036390 Winged helix DNA-binding domain superfamily D3H41_01585 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal D3H41_01585 IPR013785 Aldolase-type TIM barrel D3H41_01605 IPR011852 TRAP transporter solute receptor, TAXI family D3H41_01615 IPR020899 Arginine repressor, C-terminal D3H41_01615 IPR001669 Arginine repressor D3H41_01615 IPR036390 Winged helix DNA-binding domain superfamily D3H41_01615 IPR036251 Arginine repressor, C-terminal domain superfamily D3H41_01615 IPR020900 Arginine repressor, DNA-binding domain D3H41_01615 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_01620 IPR023958 Malate dehydrogenase, type 1, bacterial D3H41_01620 IPR036291 NAD(P)-binding domain superfamily D3H41_01620 IPR010097 Malate dehydrogenase, type 1 D3H41_01620 IPR001252 Malate dehydrogenase, active site D3H41_01620 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal D3H41_01620 IPR022383 Lactate/malate dehydrogenase, C-terminal D3H41_01620 IPR001557 L-lactate/malate dehydrogenase D3H41_01620 IPR001236 Lactate/malate dehydrogenase, N-terminal D3H41_01630 IPR033749 Polyprenyl synthetase, conserved site D3H41_01630 IPR000092 Polyprenyl synthetase D3H41_01630 IPR008949 Isoprenoid synthase domain superfamily D3H41_01635 IPR028909 Ribosomal protein L21-like D3H41_01635 IPR001787 Ribosomal protein L21 D3H41_01635 IPR018258 Ribosomal protein L21, conserved site D3H41_01635 IPR036164 L21-like superfamily D3H41_01640 IPR018261 Ribosomal protein L27, conserved site D3H41_01640 IPR001684 Ribosomal protein L27 D3H41_01645 IPR031167 OBG-type guanine nucleotide-binding (G) domain D3H41_01645 IPR035101 GTP-binding protein, Obg-type D3H41_01645 IPR014100 GTP-binding protein Obg/CgtA D3H41_01645 IPR006074 GTP1/OBG, conserved site D3H41_01645 IPR006169 GTP1/OBG domain D3H41_01645 IPR036726 GTP1/OBG domain superfamily D3H41_01645 IPR006073 GTP binding domain D3H41_01645 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_01650 IPR010619 Putative threonine/serine exporter D3H41_01655 IPR024528 Threonine/Serine exporter, ThrE D3H41_01655 IPR020914 Uncharacterised protein family UPF0442 D3H41_01660 IPR012259 Dihydrofolate reductase D3H41_01660 IPR024072 Dihydrofolate reductase-like domain superfamily D3H41_01660 IPR017925 Dihydrofolate reductase conserved site D3H41_01660 IPR001796 Dihydrofolate reductase domain D3H41_01665 IPR029052 Metallo-dependent phosphatase-like D3H41_01665 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) D3H41_01665 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type D3H41_01670 IPR023065 Uncharacterised protein family ApaG D3H41_01670 IPR036767 ApaG domain superfamily D3H41_01670 IPR007474 ApaG domain D3H41_01675 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3H41_01675 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal D3H41_01675 IPR011530 Ribosomal RNA adenine dimethylase D3H41_01675 IPR023165 rRNA adenine dimethylase-like D3H41_01675 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm D3H41_01675 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site D3H41_01680 IPR005255 PdxA family D3H41_01680 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase D3H41_01685 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type D3H41_01685 IPR015391 SurA N-terminal D3H41_01685 IPR023034 Peptidyl-prolyl isomerase SurA D3H41_01685 IPR027304 Trigger factor/SurA domain superfamily D3H41_01690 IPR005653 Organic solvent tolerance-like, N-terminal D3H41_01690 IPR007543 LptD, C-terminal D3H41_01690 IPR020889 LPS-assembly protein LptD D3H41_01695 IPR029024 TerB-like D3H41_01695 IPR001623 DnaJ domain D3H41_01695 IPR036869 Chaperone J-domain superfamily D3H41_01695 IPR023749 Co-chaperone DjlA D3H41_01695 IPR007791 Co-chaperone DjlA, N-terminal D3H41_01705 IPR033940 3-isopropylmalate dehydratase, swivel domain D3H41_01705 IPR004431 3-isopropylmalate dehydratase, small subunit D3H41_01705 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain D3H41_01705 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel D3H41_01710 IPR018136 Aconitase family, 4Fe-4S cluster binding site D3H41_01710 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain D3H41_01710 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 D3H41_01710 IPR004430 3-isopropylmalate dehydratase, large subunit D3H41_01710 IPR033941 3-Isopropylmalate dehydratase, catalytic domain D3H41_01710 IPR036008 Aconitase, iron-sulfur domain D3H41_01715 IPR004429 Isopropylmalate dehydrogenase D3H41_01715 IPR024084 Isopropylmalate dehydrogenase-like domain D3H41_01715 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site D3H41_01720 IPR000891 Pyruvate carboxyltransferase D3H41_01720 IPR005671 2-isopropylmalate synthase, bacterial-type D3H41_01720 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily D3H41_01720 IPR013785 Aldolase-type TIM barrel D3H41_01720 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site D3H41_01720 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain D3H41_01735 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily D3H41_01735 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase D3H41_01745 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_01745 IPR000847 Transcription regulator HTH, LysR D3H41_01745 IPR005119 LysR, substrate-binding D3H41_01745 IPR036390 Winged helix DNA-binding domain superfamily D3H41_01750 IPR042099 AMP-dependent synthetase-like superfamily D3H41_01750 IPR020845 AMP-binding, conserved site D3H41_01750 IPR000873 AMP-dependent synthetase/ligase D3H41_01755 IPR029035 DHS-like NAD/FAD-binding domain superfamily D3H41_01755 IPR039368 Acetolactate synthase large subunit, TPP binding domain D3H41_01755 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain D3H41_01755 IPR000399 TPP-binding enzyme, conserved site D3H41_01755 IPR029061 Thiamin diphosphate-binding fold D3H41_01755 IPR012000 Thiamine pyrophosphate enzyme, central domain D3H41_01755 IPR012846 Acetolactate synthase, large subunit, biosynthetic D3H41_01755 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding D3H41_01760 IPR039557 AHAS, ACT domain D3H41_01760 IPR019455 Acetolactate synthase, small subunit, C-terminal D3H41_01760 IPR004789 Acetolactate synthase, small subunit D3H41_01760 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal D3H41_01760 IPR002912 ACT domain D3H41_01765 IPR000160 GGDEF domain D3H41_01765 IPR029787 Nucleotide cyclase D3H41_01765 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region D3H41_01775 IPR015793 Pyruvate kinase, barrel D3H41_01775 IPR018209 Pyruvate kinase, active site D3H41_01775 IPR036918 Pyruvate kinase, C-terminal domain superfamily D3H41_01775 IPR015795 Pyruvate kinase, C-terminal D3H41_01775 IPR015806 Pyruvate kinase, insert domain superfamily D3H41_01775 IPR011037 Pyruvate kinase-like, insert domain superfamily D3H41_01775 IPR001697 Pyruvate kinase D3H41_01775 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily D3H41_01775 IPR040442 Pyruvate kinase-like domain superfamily D3H41_01780 IPR001034 DeoR-type HTH domain D3H41_01780 IPR014036 DeoR C-terminal sensor domain D3H41_01780 IPR037171 NagB/RpiA transferase-like D3H41_01780 IPR018356 Transcription regulator, HTH DeoR-type, conserved site D3H41_01780 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_01780 IPR036390 Winged helix DNA-binding domain superfamily D3H41_01785 IPR017932 Glutamine amidotransferase type 2 domain D3H41_01785 IPR001347 Sugar isomerase (SIS) D3H41_01785 IPR035466 GlmS/AgaS, SIS domain 1 D3H41_01785 IPR029055 Nucleophile aminohydrolases, N-terminal D3H41_01785 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising D3H41_01785 IPR035490 GlmS/FrlB, SIS domain 2 D3H41_01790 IPR016205 Glycerol dehydrogenase D3H41_01790 IPR018211 Alcohol dehydrogenase, iron-type, conserved site D3H41_01790 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA D3H41_01795 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 D3H41_01795 IPR004006 DhaK domain D3H41_01800 IPR004007 DhaL domain D3H41_01800 IPR012737 Dihydroxyacetone kinase, subunit L D3H41_01800 IPR036117 DhaL domain superfamily D3H41_01805 IPR036637 Phosphohistidine domain superfamily D3H41_01805 IPR023151 PEP-utilising enzyme, conserved site D3H41_01805 IPR000121 PEP-utilising enzyme, C-terminal D3H41_01805 IPR018274 PEP-utilising enzyme, active site D3H41_01805 IPR008279 PEP-utilising enzyme, mobile domain D3H41_01805 IPR036618 PtsI, HPr-binding domain superfamily D3H41_01805 IPR024692 Phosphotransferase system, enzyme I D3H41_01805 IPR008731 Phosphotransferase system, enzyme I N-terminal D3H41_01805 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily D3H41_01805 IPR006318 Phosphotransferase system, enzyme I-like D3H41_01805 IPR040442 Pyruvate kinase-like domain superfamily D3H41_01810 IPR002078 RNA polymerase sigma factor 54 interaction domain D3H41_01810 IPR003593 AAA+ ATPase domain D3H41_01810 IPR009057 Homeobox-like domain superfamily D3H41_01810 IPR002197 DNA binding HTH domain, Fis-type D3H41_01810 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_01810 IPR000014 PAS domain D3H41_01810 IPR035965 PAS domain superfamily D3H41_01810 IPR029016 GAF-like domain superfamily D3H41_01810 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 D3H41_01810 IPR013767 PAS fold D3H41_01810 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 D3H41_01815 IPR038026 MtlR-like superfamily D3H41_01815 IPR007761 Mannitol repressor MtlR-like D3H41_01820 IPR013131 Mannitol dehydrogenase, N-terminal D3H41_01820 IPR023027 Mannitol dehydrogenase, conserved site D3H41_01820 IPR013118 Mannitol dehydrogenase, C-terminal D3H41_01820 IPR000669 Mannitol dehydrogenase D3H41_01820 IPR036291 NAD(P)-binding domain superfamily D3H41_01820 IPR023028 Mannitol-1-phosphate 5-dehydrogenase D3H41_01820 IPR013328 6-phosphogluconate dehydrogenase, domain 2 D3H41_01820 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily D3H41_01825 IPR013011 Phosphotransferase system, EIIB component, type 2 D3H41_01825 IPR016152 Phosphotransferase/anion transporter D3H41_01825 IPR002178 PTS EIIA type-2 domain D3H41_01825 IPR036095 PTS system IIB component-like superfamily D3H41_01825 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC D3H41_01825 IPR013014 Phosphotransferase system, EIIC component, type 2 D3H41_01825 IPR003352 Phosphotransferase system, EIIC D3H41_01825 IPR029503 Phosphotransferase system EIIB component, mannitol-specific D3H41_01825 IPR003501 Phosphotransferase system, EIIB component, type 2/3 D3H41_01850 IPR004872 Lipoprotein NlpA family D3H41_01860 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_01860 IPR013324 RNA polymerase sigma factor, region 3/4-like D3H41_01860 IPR013325 RNA polymerase sigma factor, region 2 D3H41_01860 IPR042189 Sigma-70 factor, region 1.1 superfamily D3H41_01860 IPR007127 RNA polymerase sigma factor 70, region 1.1 D3H41_01860 IPR007631 RNA polymerase sigma factor 70, non-essential domain D3H41_01860 IPR007630 RNA polymerase sigma-70 region 4 D3H41_01860 IPR007627 RNA polymerase sigma-70 region 2 D3H41_01860 IPR009042 RNA polymerase sigma-70 region 1.2 D3H41_01860 IPR000943 RNA polymerase sigma-70 D3H41_01860 IPR014284 RNA polymerase sigma-70 like domain D3H41_01860 IPR028630 RNA polymerase sigma factor RpoD D3H41_01860 IPR012760 RNA polymerase sigma factor RpoD, C-terminal D3H41_01860 IPR007624 RNA polymerase sigma-70 region 3 D3H41_01865 IPR030846 DNA primase DnaG, bacteria D3H41_01865 IPR002694 Zinc finger, CHC2-type D3H41_01865 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal D3H41_01865 IPR013264 DNA primase, catalytic core, N-terminal D3H41_01865 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily D3H41_01865 IPR019475 DNA primase, DnaB-helicase binding domain D3H41_01865 IPR006295 DNA primase, DnaG D3H41_01865 IPR013173 DNA primase DnaG, DnaB-binding domain D3H41_01865 IPR006171 TOPRIM domain D3H41_01865 IPR034151 Bacterial DnaG primase, TOPRIM domain D3H41_01865 IPR036977 DNA Primase, CHC2-type zinc finger D3H41_01870 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 D3H41_01870 IPR042184 YqeY/Aim41, N-terminal domain D3H41_01870 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like D3H41_01870 IPR019004 Uncharacterised protein YqeY/Aim41 D3H41_01875 IPR001911 Ribosomal protein S21 D3H41_01875 IPR018278 Ribosomal protein S21, conserved site D3H41_01875 IPR038380 Ribosomal protein S21 superfamily D3H41_01880 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD D3H41_01880 IPR017860 Peptidase M22, conserved site D3H41_01880 IPR000905 Gcp-like domain D3H41_01880 IPR017861 Kae1/TsaD family D3H41_01885 IPR029058 Alpha/Beta hydrolase fold D3H41_01885 IPR000073 Alpha/beta hydrolase fold-1 D3H41_01885 IPR019913 Pyrimidine utilisation protein RutD D3H41_01890 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY D3H41_01895 IPR006156 Dihydroneopterin aldolase D3H41_01895 IPR006157 Dihydroneopterin aldolase/epimerase domain D3H41_01900 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily D3H41_01900 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK D3H41_01905 IPR003824 Undecaprenyl-diphosphatase UppP D3H41_01910 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain D3H41_01910 IPR002646 Poly A polymerase, head domain D3H41_01910 IPR006674 HD domain D3H41_01910 IPR003607 HD/PDEase domain D3H41_01910 IPR012006 tRNA nucleotidyltransferase, proteobacteria D3H41_01915 IPR002477 Peptidoglycan binding-like D3H41_01915 IPR036365 PGBD-like superfamily D3H41_01915 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_01915 IPR003593 AAA+ ATPase domain D3H41_01915 IPR036366 PGBD superfamily D3H41_01925 IPR029055 Nucleophile aminohydrolases, N-terminal D3H41_01925 IPR000101 Gamma-glutamyltranspeptidase D3H41_01930 IPR003646 SH3-like domain, bacterial-type D3H41_01930 IPR016476 SH3 domain protein D3H41_01935 IPR001204 Phosphate transporter D3H41_01940 IPR002727 Protein of unknown function DUF47 D3H41_01940 IPR038078 PhoU-like domain superfamily D3H41_01940 IPR018445 Putative phosphate transport regulator D3H41_01945 IPR023577 CYTH domain D3H41_01945 IPR007899 CHAD domain D3H41_01945 IPR033469 CYTH-like domain superfamily D3H41_01945 IPR039013 Inorganic triphosphatase YgiF D3H41_01955 IPR033479 Double Cache domain 1 D3H41_01955 IPR029151 Periplasmic sensor-like domain superfamily D3H41_01955 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain D3H41_01955 IPR003660 HAMP domain D3H41_01960 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase D3H41_01960 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain D3H41_01960 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme D3H41_01965 IPR023030 Bifunctional protein HldE D3H41_01965 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site D3H41_01965 IPR004821 Cytidyltransferase-like domain D3H41_01965 IPR011914 RfaE bifunctional protein, domain II D3H41_01965 IPR029056 Ribokinase-like D3H41_01965 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3H41_01965 IPR011611 Carbohydrate kinase PfkB D3H41_01965 IPR011913 RfaE bifunctional protein, domain I D3H41_01970 IPR003423 Outer membrane efflux protein D3H41_01970 IPR010130 Type I secretion outer membrane protein, TolC D3H41_01975 IPR004385 Nucleoside diphosphate pyrophosphatase D3H41_01975 IPR015797 NUDIX hydrolase-like domain superfamily D3H41_01975 IPR020084 NUDIX hydrolase, conserved site D3H41_01975 IPR000086 NUDIX hydrolase domain D3H41_01980 IPR009659 Protein of unknown function DUF1249 D3H41_01985 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type D3H41_01985 IPR029052 Metallo-dependent phosphatase-like D3H41_01985 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA D3H41_01990 IPR029058 Alpha/Beta hydrolase fold D3H41_01990 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA D3H41_01995 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 D3H41_01995 IPR018522 DNA topoisomerase, type IIA, conserved site D3H41_01995 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative D3H41_01995 IPR013760 DNA topoisomerase, type IIA-like domain superfamily D3H41_01995 IPR006171 TOPRIM domain D3H41_01995 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal D3H41_01995 IPR002288 DNA gyrase B subunit, C-terminal D3H41_01995 IPR003594 Histidine kinase/HSP90-like ATPase D3H41_01995 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3H41_01995 IPR020568 Ribosomal protein S5 domain 2-type fold D3H41_01995 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D3H41_01995 IPR001241 DNA topoisomerase, type IIA D3H41_02000 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal D3H41_02000 IPR013760 DNA topoisomerase, type IIA-like domain superfamily D3H41_02000 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative D3H41_02000 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta D3H41_02000 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal D3H41_02000 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily D3H41_02000 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat D3H41_02005 IPR001478 PDZ domain D3H41_02005 IPR036034 PDZ superfamily D3H41_02005 IPR011783 Peptidase S1C, DegS D3H41_02005 IPR009003 Peptidase S1, PA clan D3H41_02005 IPR001940 Peptidase S1C D3H41_02010 IPR011782 Peptidase S1C, Do D3H41_02010 IPR036034 PDZ superfamily D3H41_02010 IPR001940 Peptidase S1C D3H41_02010 IPR009003 Peptidase S1, PA clan D3H41_02010 IPR001478 PDZ domain D3H41_02015 IPR009386 Protein of unknown function DUF1043 D3H41_02025 IPR030870 Cell division protein ZapE D3H41_02025 IPR005654 ATPase, AFG1-like D3H41_02025 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_02035 IPR036899 Ribosomal protein L13 superfamily D3H41_02035 IPR005823 Ribosomal protein L13, bacterial-type D3H41_02035 IPR023563 Ribosomal protein L13, conserved site D3H41_02035 IPR005822 Ribosomal protein L13 D3H41_02040 IPR000754 Ribosomal protein S9 D3H41_02040 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D3H41_02040 IPR023035 Ribosomal protein S9, bacterial/plastid D3H41_02040 IPR020568 Ribosomal protein S5 domain 2-type fold D3H41_02040 IPR020574 Ribosomal protein S9, conserved site D3H41_02045 IPR017941 Rieske [2Fe-2S] iron-sulphur domain D3H41_02045 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal D3H41_02045 IPR005805 Rieske iron-sulphur protein, C-terminal D3H41_02045 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit D3H41_02045 IPR014349 Rieske iron-sulphur protein D3H41_02045 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily D3H41_02050 IPR036150 Cytochrome b/b6, C-terminal domain superfamily D3H41_02050 IPR005798 Cytochrome b/b6, C-terminal D3H41_02050 IPR005797 Cytochrome b/b6, N-terminal D3H41_02050 IPR016174 Di-haem cytochrome, transmembrane D3H41_02050 IPR027387 Cytochrome b/b6-like domain superfamily D3H41_02050 IPR030689 Cytochrome b D3H41_02055 IPR009056 Cytochrome c-like domain D3H41_02055 IPR036909 Cytochrome c-like domain superfamily D3H41_02055 IPR002326 Cytochrome c1 D3H41_02060 IPR034341 Stringent starvation protein A, N-terminal D3H41_02060 IPR036249 Thioredoxin-like superfamily D3H41_02060 IPR004046 Glutathione S-transferase, C-terminal D3H41_02060 IPR004045 Glutathione S-transferase, N-terminal D3H41_02060 IPR040079 Glutathione Transferase family D3H41_02060 IPR036282 Glutathione S-transferase, C-terminal domain superfamily D3H41_02060 IPR010987 Glutathione S-transferase, C-terminal-like D3H41_02065 IPR036760 SspB-like superfamily D3H41_02065 IPR007481 Stringent starvation protein B D3H41_02070 IPR014004 Transport-associated and nodulation domain, bacteria D3H41_02070 IPR007055 BON domain D3H41_02075 IPR035461 GmhA/DiaA D3H41_02075 IPR023070 DnaA initiator-associating protein D3H41_02075 IPR001347 Sugar isomerase (SIS) D3H41_02080 IPR011335 Restriction endonuclease type II-like D3H41_02080 IPR011856 tRNA endonuclease-like domain superfamily D3H41_02080 IPR003509 Uncharacterised protein family UPF0102 D3H41_02085 IPR028082 Periplasmic binding protein-like I D3H41_02085 IPR011990 Tetratricopeptide-like helical domain superfamily D3H41_02085 IPR007443 Penicillin-binding protein activator LpoA D3H41_02090 IPR035996 Tetrapyrrole methylase superfamily D3H41_02090 IPR008189 rRNA small subunit methyltransferase I D3H41_02090 IPR014776 Tetrapyrrole methylase, subdomain 2 D3H41_02090 IPR014777 Tetrapyrrole methylase, subdomain 1 D3H41_02090 IPR000878 Tetrapyrrole methylase D3H41_02090 IPR018063 SAM-dependent methyltransferase RsmI, conserved site D3H41_02105 IPR002903 Ribosomal RNA small subunit methyltransferase H D3H41_02105 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily D3H41_02105 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3H41_02110 IPR011922 Cell division protein FtsL D3H41_02115 IPR012338 Beta-lactamase/transpeptidase-like D3H41_02115 IPR001460 Penicillin-binding protein, transpeptidase D3H41_02115 IPR036138 Penicillin-binding protein, dimerisation domain superfamily D3H41_02115 IPR005311 Penicillin-binding protein, dimerisation domain D3H41_02115 IPR037532 Peptidoglycan D,D-transpeptidase FtsI D3H41_02120 IPR036565 Mur-like, catalytic domain superfamily D3H41_02120 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase D3H41_02120 IPR035911 MurE/MurF, N-terminal D3H41_02120 IPR000713 Mur ligase, N-terminal catalytic domain D3H41_02120 IPR013221 Mur ligase, central D3H41_02120 IPR036615 Mur ligase, C-terminal domain superfamily D3H41_02120 IPR004101 Mur ligase, C-terminal D3H41_02125 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase D3H41_02125 IPR035911 MurE/MurF, N-terminal D3H41_02125 IPR036565 Mur-like, catalytic domain superfamily D3H41_02125 IPR004101 Mur ligase, C-terminal D3H41_02125 IPR036615 Mur ligase, C-terminal domain superfamily D3H41_02125 IPR013221 Mur ligase, central D3H41_02125 IPR000713 Mur ligase, N-terminal catalytic domain D3H41_02130 IPR000715 Glycosyl transferase, family 4 D3H41_02130 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site D3H41_02130 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase D3H41_02135 IPR036565 Mur-like, catalytic domain superfamily D3H41_02135 IPR004101 Mur ligase, C-terminal D3H41_02135 IPR036615 Mur ligase, C-terminal domain superfamily D3H41_02135 IPR013221 Mur ligase, central D3H41_02135 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase D3H41_02140 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site D3H41_02140 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA D3H41_02140 IPR013437 Probable peptidoglycan glycosyltransferase FtsW D3H41_02145 IPR006009 N-acetylglucosaminyltransferase, MurG D3H41_02145 IPR004276 Glycosyltransferase family 28, N-terminal domain D3H41_02145 IPR007235 Glycosyl transferase, family 28, C-terminal D3H41_02150 IPR036615 Mur ligase, C-terminal domain superfamily D3H41_02150 IPR036565 Mur-like, catalytic domain superfamily D3H41_02150 IPR004101 Mur ligase, C-terminal D3H41_02150 IPR000713 Mur ligase, N-terminal catalytic domain D3H41_02150 IPR005758 UDP-N-acetylmuramate--L-alanine ligase D3H41_02150 IPR013221 Mur ligase, central D3H41_02155 IPR013685 POTRA domain, FtsQ-type D3H41_02155 IPR026579 Cell division protein FtsQ D3H41_02155 IPR034746 POTRA domain D3H41_02155 IPR005548 Cell division protein FtsQ/DivIB D3H41_02160 IPR003494 SHS2 domain inserted in FtsA D3H41_02160 IPR020823 Cell division protein FtsA D3H41_02165 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain D3H41_02165 IPR036525 Tubulin/FtsZ, GTPase domain superfamily D3H41_02165 IPR024757 Cell division protein FtsZ, C-terminal D3H41_02165 IPR008280 Tubulin/FtsZ, C-terminal D3H41_02165 IPR020805 Cell division protein FtsZ, conserved site D3H41_02165 IPR000158 Cell division protein FtsZ D3H41_02165 IPR003008 Tubulin/FtsZ, GTPase domain D3H41_02170 IPR020568 Ribosomal protein S5 domain 2-type fold D3H41_02170 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal D3H41_02170 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase D3H41_02170 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal D3H41_02180 IPR011130 SecA, preprotein cross-linking domain D3H41_02180 IPR036266 SecA, Wing/Scaffold superfamily D3H41_02180 IPR011115 SecA DEAD-like, N-terminal D3H41_02180 IPR036670 SecA, preprotein cross-linking domain superfamily D3H41_02180 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_02180 IPR014018 SecA motor DEAD D3H41_02180 IPR020937 SecA conserved site D3H41_02180 IPR011116 SecA Wing/Scaffold D3H41_02180 IPR000185 Protein translocase subunit SecA D3H41_02180 IPR004027 SEC-C motif D3H41_02185 IPR000086 NUDIX hydrolase domain D3H41_02185 IPR020084 NUDIX hydrolase, conserved site D3H41_02185 IPR015797 NUDIX hydrolase-like domain superfamily D3H41_02185 IPR020476 NUDIX hydrolase D3H41_02185 IPR003561 Mutator MutT D3H41_02190 IPR036291 NAD(P)-binding domain superfamily D3H41_02190 IPR023940 Dihydrodipicolinate reductase D3H41_02190 IPR022664 Dihydrodipicolinate reductase, conserved site D3H41_02190 IPR022663 Dihydrodipicolinate reductase, C-terminal D3H41_02190 IPR000846 Dihydrodipicolinate reductase, N-terminal D3H41_02195 IPR029062 Class I glutamine amidotransferase-like D3H41_02195 IPR017926 Glutamine amidotransferase D3H41_02195 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily D3H41_02195 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain D3H41_02195 IPR006274 Carbamoyl-phosphate synthase, small subunit D3H41_02195 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain D3H41_02200 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily D3H41_02200 IPR016185 Pre-ATP-grasp domain superfamily D3H41_02200 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain D3H41_02200 IPR036914 Methylglyoxal synthase-like domain superfamily D3H41_02200 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain D3H41_02200 IPR011607 Methylglyoxal synthase-like domain D3H41_02200 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain D3H41_02200 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain D3H41_02200 IPR006275 Carbamoyl-phosphate synthase, large subunit D3H41_02200 IPR011761 ATP-grasp fold D3H41_02215 IPR002781 Transmembrane protein TauE-like D3H41_02220 IPR000847 Transcription regulator HTH, LysR D3H41_02220 IPR005119 LysR, substrate-binding D3H41_02220 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_02220 IPR036390 Winged helix DNA-binding domain superfamily D3H41_02225 IPR005115 Uncharacterised domain UPF0126 D3H41_02230 IPR002491 ABC transporter periplasmic binding domain D3H41_02230 IPR023544 ABC transporter, vitamin B12-binding protein D3H41_02235 IPR031347 Protein AmpE D3H41_02235 IPR004485 Cobalamin biosynthesis CobD/CbiB D3H41_02240 IPR010049 MTA/SAH nucleosidase D3H41_02240 IPR000845 Nucleoside phosphorylase domain D3H41_02240 IPR035994 Nucleoside phosphorylase superfamily D3H41_02250 IPR028261 Dihydroprymidine dehydrogenase domain II D3H41_02250 IPR036188 FAD/NAD(P)-binding domain superfamily D3H41_02250 IPR023753 FAD/NAD(P)-binding domain D3H41_02250 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 D3H41_02250 IPR009051 Alpha-helical ferredoxin D3H41_02250 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain D3H41_02255 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily D3H41_02255 IPR002932 Glutamate synthase domain D3H41_02255 IPR006982 Glutamate synthase, central-N D3H41_02255 IPR002489 Glutamate synthase, alpha subunit, C-terminal D3H41_02255 IPR017932 Glutamine amidotransferase type 2 domain D3H41_02255 IPR029055 Nucleophile aminohydrolases, N-terminal D3H41_02255 IPR013785 Aldolase-type TIM barrel D3H41_02260 IPR023753 FAD/NAD(P)-binding domain D3H41_02260 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 D3H41_02260 IPR028261 Dihydroprymidine dehydrogenase domain II D3H41_02260 IPR036188 FAD/NAD(P)-binding domain superfamily D3H41_02260 IPR009051 Alpha-helical ferredoxin D3H41_02265 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily D3H41_02265 IPR006982 Glutamate synthase, central-N D3H41_02265 IPR002932 Glutamate synthase domain D3H41_02265 IPR013785 Aldolase-type TIM barrel D3H41_02265 IPR029055 Nucleophile aminohydrolases, N-terminal D3H41_02265 IPR017932 Glutamine amidotransferase type 2 domain D3H41_02265 IPR002489 Glutamate synthase, alpha subunit, C-terminal D3H41_02270 IPR006638 Elp3/MiaB/NifB D3H41_02270 IPR005911 Protein YhcC-like D3H41_02270 IPR032432 Radical SAM, C-terminal extension D3H41_02270 IPR007197 Radical SAM D3H41_02270 IPR039661 ELP3/YhcC D3H41_02270 IPR023404 Radical SAM, alpha/beta horseshoe D3H41_02275 IPR029016 GAF-like domain superfamily D3H41_02275 IPR000160 GGDEF domain D3H41_02275 IPR029787 Nucleotide cyclase D3H41_02275 IPR016132 Phytochrome chromophore attachment domain D3H41_02275 IPR013515 Phytochrome, central region D3H41_02275 IPR001633 EAL domain D3H41_02275 IPR001294 Phytochrome D3H41_02275 IPR003018 GAF domain D3H41_02275 IPR035919 EAL domain superfamily D3H41_02280 IPR011006 CheY-like superfamily D3H41_02280 IPR003594 Histidine kinase/HSP90-like ATPase D3H41_02280 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3H41_02280 IPR005467 Histidine kinase domain D3H41_02280 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily D3H41_02280 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily D3H41_02280 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain D3H41_02280 IPR040642 Histidine kinase receptor ArcB, transmembrane domain D3H41_02280 IPR036641 HPT domain superfamily D3H41_02280 IPR000014 PAS domain D3H41_02280 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB D3H41_02280 IPR000700 PAS-associated, C-terminal D3H41_02280 IPR004358 Signal transduction histidine kinase-related protein, C-terminal D3H41_02280 IPR035965 PAS domain superfamily D3H41_02280 IPR013767 PAS fold D3H41_02280 IPR001789 Signal transduction response regulator, receiver domain D3H41_02280 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain D3H41_02290 IPR039420 Transcriptional regulatory protein WalR-like D3H41_02290 IPR011006 CheY-like superfamily D3H41_02290 IPR001789 Signal transduction response regulator, receiver domain D3H41_02290 IPR016032 Signal transduction response regulator, C-terminal effector D3H41_02290 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_02290 IPR001867 OmpR/PhoB-type DNA-binding domain D3H41_02305 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily D3H41_02305 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein D3H41_02305 IPR010203 Regulator of ribonuclease activity A D3H41_02320 IPR027795 CASTOR, ACT domain D3H41_02320 IPR018042 Aspartate kinase, conserved site D3H41_02320 IPR001341 Aspartate kinase D3H41_02320 IPR001342 Homoserine dehydrogenase, catalytic D3H41_02320 IPR036393 Acetylglutamate kinase-like superfamily D3H41_02320 IPR002912 ACT domain D3H41_02320 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I D3H41_02320 IPR001048 Aspartate/glutamate/uridylate kinase D3H41_02320 IPR036291 NAD(P)-binding domain superfamily D3H41_02320 IPR019811 Homoserine dehydrogenase, conserved site D3H41_02320 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain D3H41_02320 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding D3H41_02325 IPR020568 Ribosomal protein S5 domain 2-type fold D3H41_02325 IPR000870 Homoserine kinase D3H41_02325 IPR006203 GHMP kinase, ATP-binding, conserved site D3H41_02325 IPR006204 GHMP kinase N-terminal domain D3H41_02325 IPR036554 GHMP kinase, C-terminal domain superfamily D3H41_02325 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D3H41_02325 IPR013750 GHMP kinase, C-terminal domain D3H41_02330 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme D3H41_02330 IPR037158 Threonine synthase, N-terminal domain superfamily D3H41_02330 IPR029144 Threonine synthase, N-terminal D3H41_02330 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site D3H41_02330 IPR001926 Pyridoxal-phosphate dependent enzyme D3H41_02330 IPR004450 Threonine synthase-like D3H41_02340 IPR019777 Formate C-acetyltransferase glycine radical, conserved site D3H41_02340 IPR001150 Glycine radical domain D3H41_02340 IPR011140 Autonomous glycyl radical cofactor GrcA D3H41_02345 IPR013022 Xylose isomerase-like, TIM barrel domain D3H41_02345 IPR018246 AP endonuclease 2, zinc binding site D3H41_02345 IPR001719 AP endonuclease 2 D3H41_02345 IPR036237 Xylose isomerase-like superfamily D3H41_02355 IPR002043 Uracil-DNA glycosylase family 1 D3H41_02355 IPR018085 Uracil-DNA glycosylase, active site D3H41_02355 IPR005122 Uracil-DNA glycosylase-like D3H41_02355 IPR036895 Uracil-DNA glycosylase-like domain superfamily D3H41_02370 IPR001463 Sodium:alanine symporter D3H41_02375 IPR005583 Peroxide stress protein YaaA D3H41_02380 IPR014001 Helicase superfamily 1/2, ATP-binding domain D3H41_02380 IPR011545 DEAD/DEAH box helicase domain D3H41_02380 IPR028621 ATP-dependent RNA helicase SrmB D3H41_02380 IPR014014 RNA helicase, DEAD-box type, Q motif D3H41_02380 IPR001650 Helicase, C-terminal D3H41_02380 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_02380 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site D3H41_02385 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3H41_02385 IPR002052 DNA methylase, N-6 adenine-specific, conserved site D3H41_02385 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase D3H41_02385 IPR007848 Methyltransferase small domain D3H41_02390 IPR004685 Branched-chain amino acid transport system II carrier protein D3H41_02395 IPR001226 Flavodoxin, conserved site D3H41_02395 IPR008254 Flavodoxin/nitric oxide synthase D3H41_02395 IPR029039 Flavoprotein-like superfamily D3H41_02395 IPR010086 Flavodoxin, long chain D3H41_02400 IPR004107 Integrase, SAM-like, N-terminal D3H41_02400 IPR011932 Tyrosine recombinase XerD D3H41_02400 IPR010998 Integrase/recombinase, N-terminal D3H41_02400 IPR002104 Integrase, catalytic domain D3H41_02400 IPR013762 Integrase-like, catalytic domain superfamily D3H41_02400 IPR011010 DNA breaking-rejoining enzyme, catalytic core D3H41_02400 IPR023009 Tyrosine recombinase XerC/XerD D3H41_02405 IPR033954 Disulphide bond isomerase, DsbC/G D3H41_02405 IPR036249 Thioredoxin-like superfamily D3H41_02405 IPR013766 Thioredoxin domain D3H41_02405 IPR017937 Thioredoxin, conserved site D3H41_02405 IPR012336 Thioredoxin-like fold D3H41_02405 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily D3H41_02405 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal D3H41_02410 IPR004610 Bacterial RecJ exonuclease D3H41_02410 IPR038763 DHH phosphoesterase superfamily D3H41_02410 IPR001667 DDH domain D3H41_02410 IPR041122 RecJ, OB domain D3H41_02410 IPR003156 DHHA1 domain D3H41_02420 IPR012340 Nucleic acid-binding, OB-fold D3H41_02420 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type D3H41_02420 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal D3H41_02420 IPR002313 Lysine-tRNA ligase, class II D3H41_02420 IPR006195 Aminoacyl-tRNA synthetase, class II D3H41_02420 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) D3H41_02425 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 D3H41_02425 IPR002197 DNA binding HTH domain, Fis-type D3H41_02425 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 D3H41_02425 IPR002078 RNA polymerase sigma factor 54 interaction domain D3H41_02425 IPR001789 Signal transduction response regulator, receiver domain D3H41_02425 IPR025944 Sigma-54 interaction domain, conserved site D3H41_02425 IPR009057 Homeobox-like domain superfamily D3H41_02425 IPR003593 AAA+ ATPase domain D3H41_02425 IPR011006 CheY-like superfamily D3H41_02425 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_02435 IPR036812 NADP-dependent oxidoreductase domain superfamily D3H41_02435 IPR020471 Aldo/keto reductase D3H41_02435 IPR023210 NADP-dependent oxidoreductase domain D3H41_02445 IPR004230 DNA mismatch repair protein MutH D3H41_02445 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II D3H41_02445 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily D3H41_02445 IPR011335 Restriction endonuclease type II-like D3H41_02450 IPR015797 NUDIX hydrolase-like domain superfamily D3H41_02450 IPR000086 NUDIX hydrolase domain D3H41_02450 IPR022927 RNA pyrophosphohydrolase RppH D3H41_02450 IPR020084 NUDIX hydrolase, conserved site D3H41_02450 IPR020476 NUDIX hydrolase D3H41_02455 IPR008731 Phosphotransferase system, enzyme I N-terminal D3H41_02455 IPR006318 Phosphotransferase system, enzyme I-like D3H41_02455 IPR036618 PtsI, HPr-binding domain superfamily D3H41_02455 IPR036637 Phosphohistidine domain superfamily D3H41_02455 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily D3H41_02455 IPR023151 PEP-utilising enzyme, conserved site D3H41_02455 IPR003018 GAF domain D3H41_02455 IPR000121 PEP-utilising enzyme, C-terminal D3H41_02455 IPR040442 Pyruvate kinase-like domain superfamily D3H41_02455 IPR018274 PEP-utilising enzyme, active site D3H41_02455 IPR008279 PEP-utilising enzyme, mobile domain D3H41_02455 IPR029016 GAF-like domain superfamily D3H41_02460 IPR002781 Transmembrane protein TauE-like D3H41_02470 IPR000398 Thymidylate synthase D3H41_02470 IPR020940 Thymidylate synthase, active site D3H41_02470 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain D3H41_02470 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily D3H41_02480 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein D3H41_02480 IPR003841 Sodium-dependent phosphate transport protein D3H41_02485 IPR036390 Winged helix DNA-binding domain superfamily D3H41_02485 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_02485 IPR000847 Transcription regulator HTH, LysR D3H41_02485 IPR005119 LysR, substrate-binding D3H41_02490 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_02490 IPR036390 Winged helix DNA-binding domain superfamily D3H41_02490 IPR011991 ArsR-like helix-turn-helix domain D3H41_02490 IPR001845 HTH ArsR-type DNA-binding domain D3H41_02495 IPR002583 Ribosomal protein S20 D3H41_02495 IPR036510 Ribosomal protein S20 superfamily D3H41_02500 IPR004268 Peptidoglycan biosynthesis protein MurJ D3H41_02505 IPR023465 Riboflavin kinase domain superfamily D3H41_02505 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic D3H41_02505 IPR015864 FAD synthetase D3H41_02505 IPR002606 Riboflavin kinase, bacterial D3H41_02505 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3H41_02505 IPR023468 Riboflavin kinase D3H41_02510 IPR002301 Isoleucine-tRNA ligase D3H41_02510 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain D3H41_02510 IPR002300 Aminoacyl-tRNA synthetase, class Ia D3H41_02510 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site D3H41_02510 IPR010663 Zinc finger, FPG/IleRS-type D3H41_02510 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain D3H41_02510 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding D3H41_02510 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3H41_02510 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding D3H41_02510 IPR023585 Isoleucine-tRNA ligase, type 1 D3H41_02515 IPR001872 Peptidase A8, signal peptidase II D3H41_02520 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain D3H41_02525 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase D3H41_02535 IPR011006 CheY-like superfamily D3H41_02535 IPR007492 LytTR DNA-binding domain D3H41_02535 IPR001789 Signal transduction response regulator, receiver domain D3H41_02540 IPR010559 Signal transduction histidine kinase, internal region D3H41_02540 IPR003018 GAF domain D3H41_02540 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3H41_02540 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region D3H41_02545 IPR003706 CstA, N-terminal domain D3H41_02560 IPR040190 N-acetylmuramic acid 6-phosphate etherase/glucokinase regulatory protein D3H41_02560 IPR001347 Sugar isomerase (SIS) D3H41_02560 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ D3H41_02560 IPR005486 Glucokinase regulatory protein, conserved site D3H41_02565 IPR005338 Anhydro-N-acetylmuramic acid kinase D3H41_02570 IPR001764 Glycoside hydrolase, family 3, N-terminal D3H41_02570 IPR019800 Glycoside hydrolase, family 3, active site D3H41_02570 IPR022956 Beta-hexosaminidase, bacterial D3H41_02570 IPR017853 Glycoside hydrolase superfamily D3H41_02570 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily D3H41_02575 IPR006218 DAHP synthetase I/KDSA D3H41_02575 IPR013785 Aldolase-type TIM barrel D3H41_02575 IPR006219 DHAP synthase, class 1 D3H41_02580 IPR036291 NAD(P)-binding domain superfamily D3H41_02580 IPR003099 Prephenate dehydrogenase D3H41_02580 IPR002701 Chorismate mutase II, prokaryotic-type D3H41_02580 IPR011277 Chorismate mutase, T-protein D3H41_02580 IPR036979 Chorismate mutase domain superfamily D3H41_02580 IPR036263 Chorismate mutase type II superfamily D3H41_02580 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein D3H41_02580 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily D3H41_02585 IPR011055 Duplicated hybrid motif D3H41_02585 IPR007340 Opacity-associated protein A D3H41_02585 IPR016047 Peptidase M23 D3H41_02590 IPR027021 Cyclic di-GMP binding protein, PA4608 type D3H41_02590 IPR009875 PilZ domain D3H41_02595 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_02595 IPR003439 ABC transporter-like D3H41_02595 IPR017871 ABC transporter, conserved site D3H41_02595 IPR022374 Energy-dependent translational throttle protein EttA D3H41_02595 IPR003593 AAA+ ATPase domain D3H41_02595 IPR032781 ABC-transporter extension domain D3H41_02600 IPR008258 Transglycosylase SLT domain 1 D3H41_02600 IPR012289 Lytic transglycosylase, superhelical linker D3H41_02600 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily D3H41_02600 IPR023346 Lysozyme-like domain superfamily D3H41_02600 IPR000189 Prokaryotic transglycosylase, active site D3H41_02600 IPR008939 Lytic transglycosylase, superhelical U-shaped D3H41_02605 IPR010921 Trp repressor/replication initiator D3H41_02605 IPR000831 Trp repressor D3H41_02605 IPR013335 Trp repressor, bacterial D3H41_02605 IPR038116 TrpR-like superfamily D3H41_02610 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 D3H41_02610 IPR029001 Inosine triphosphate pyrophosphatase-like D3H41_02610 IPR002786 Inosine/xanthosine triphosphatase D3H41_02615 IPR018528 Prephenate dehydratase, conserved site D3H41_02615 IPR010952 Chorismate mutase, gammaproteobacteria D3H41_02615 IPR002701 Chorismate mutase II, prokaryotic-type D3H41_02615 IPR036979 Chorismate mutase domain superfamily D3H41_02615 IPR036263 Chorismate mutase type II superfamily D3H41_02615 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase D3H41_02615 IPR002912 ACT domain D3H41_02615 IPR001086 Prephenate dehydratase D3H41_02620 IPR036567 Ribosome hibernation promotion factor-like D3H41_02620 IPR003489 Ribosome hibernation promoting factor/RaiA D3H41_02625 IPR023346 Lysozyme-like domain superfamily D3H41_02625 IPR023703 Membrane-bound lytic murein transglycosylase F D3H41_02625 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF D3H41_02625 IPR000189 Prokaryotic transglycosylase, active site D3H41_02625 IPR008258 Transglycosylase SLT domain 1 D3H41_02630 IPR017689 Outer membrane protein assembly factor BamD D3H41_02630 IPR011990 Tetratricopeptide-like helical domain superfamily D3H41_02630 IPR039565 Outer membrane lipoprotein BamD-like D3H41_02635 IPR036986 RNA-binding S4 domain superfamily D3H41_02635 IPR020103 Pseudouridine synthase, catalytic domain superfamily D3H41_02635 IPR006225 Pseudouridine synthase, RluC/RluD D3H41_02635 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site D3H41_02635 IPR006145 Pseudouridine synthase, RsuA/RluA D3H41_02635 IPR002942 RNA-binding S4 domain D3H41_02645 IPR003593 AAA+ ATPase domain D3H41_02645 IPR001270 ClpA/B family D3H41_02645 IPR004176 Clp, N-terminal D3H41_02645 IPR017730 Chaperonin ClpB D3H41_02645 IPR003959 ATPase, AAA-type, core D3H41_02645 IPR019489 Clp ATPase, C-terminal D3H41_02645 IPR028299 ClpA/B, conserved site 2 D3H41_02645 IPR041546 ClpA/ClpB, AAA lid domain D3H41_02645 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_02645 IPR018368 ClpA/B, conserved site 1 D3H41_02645 IPR036628 Clp, N-terminal domain superfamily D3H41_02695 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily D3H41_02695 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase D3H41_02710 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site D3H41_02710 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain D3H41_02720 IPR007476 Putative exonuclease, RdgC D3H41_02730 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_02730 IPR039420 Transcriptional regulatory protein WalR-like D3H41_02730 IPR001789 Signal transduction response regulator, receiver domain D3H41_02730 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB D3H41_02730 IPR011006 CheY-like superfamily D3H41_02730 IPR001867 OmpR/PhoB-type DNA-binding domain D3H41_02735 IPR005467 Histidine kinase domain D3H41_02735 IPR004358 Signal transduction histidine kinase-related protein, C-terminal D3H41_02735 IPR003594 Histidine kinase/HSP90-like ATPase D3H41_02735 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3H41_02735 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain D3H41_02735 IPR013767 PAS fold D3H41_02735 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily D3H41_02735 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR D3H41_02735 IPR021766 Phosphate regulon sensor protein PhoR D3H41_02735 IPR035965 PAS domain superfamily D3H41_02735 IPR000014 PAS domain D3H41_02740 IPR024370 PBP domain D3H41_02740 IPR011862 Phosphate binding protein D3H41_02750 IPR022371 Exopolyphosphatase D3H41_02750 IPR003695 Ppx/GppA phosphatase D3H41_02750 IPR030673 Pyrophosphatase, GppA/Ppx-type D3H41_02755 IPR025200 Polyphosphate kinase C-terminal domain 2 D3H41_02755 IPR001736 Phospholipase D/Transphosphatidylase D3H41_02755 IPR036832 Polyphosphate kinase N-terminal domain superfamily D3H41_02755 IPR003414 Polyphosphate kinase D3H41_02755 IPR041108 Polyphosphate kinase, C-terminal domain 1 D3H41_02755 IPR024953 Polyphosphate kinase middle domain D3H41_02755 IPR025198 Polyphosphate kinase N-terminal domain D3H41_02755 IPR036830 Polyphosphate kinase middle domain superfamily D3H41_02760 IPR035906 MetI-like superfamily D3H41_02760 IPR011864 Phosphate ABC transporter, permease protein PstC D3H41_02760 IPR000515 ABC transporter type 1, transmembrane domain MetI-like D3H41_02765 IPR000515 ABC transporter type 1, transmembrane domain MetI-like D3H41_02765 IPR035906 MetI-like superfamily D3H41_02765 IPR005672 Phosphate transport system permease protein PstA D3H41_02770 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_02770 IPR015850 ABC transporter, phosphate import, PstB D3H41_02770 IPR003439 ABC transporter-like D3H41_02770 IPR003593 AAA+ ATPase domain D3H41_02770 IPR017871 ABC transporter, conserved site D3H41_02770 IPR005670 Phosphate transport system permease protein 1 D3H41_02775 IPR028366 Phosphate transport system protein PhoU D3H41_02775 IPR026022 PhoU domain D3H41_02775 IPR038078 PhoU-like domain superfamily D3H41_02780 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_02780 IPR022486 Polyphosphate kinase 2, PA0141 D3H41_02780 IPR022488 Polyphosphate kinase-2-related D3H41_02780 IPR016898 Polyphosphate kinase 2 D3H41_02785 IPR005627 Copper homeostasis protein CutC D3H41_02785 IPR023648 Copper homeostasis CutC domain D3H41_02785 IPR036822 Copper homeostasis (CutC) domain superfamily D3H41_02790 IPR013766 Thioredoxin domain D3H41_02790 IPR036249 Thioredoxin-like superfamily D3H41_02790 IPR019479 Peroxiredoxin, C-terminal D3H41_02790 IPR024706 Peroxiredoxin, AhpC-type D3H41_02790 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant D3H41_02795 IPR000847 Transcription regulator HTH, LysR D3H41_02795 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_02795 IPR036390 Winged helix DNA-binding domain superfamily D3H41_02795 IPR005119 LysR, substrate-binding D3H41_02800 IPR006252 Malate synthase A D3H41_02800 IPR001465 Malate synthase D3H41_02800 IPR019830 Malate synthase, conserved site D3H41_02800 IPR011076 Malate synthase-like superfamily D3H41_02805 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site D3H41_02805 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily D3H41_02805 IPR040442 Pyruvate kinase-like domain superfamily D3H41_02805 IPR006254 Isocitrate lyase D3H41_02805 IPR039556 ICL/PEPM domain D3H41_02810 IPR000644 CBS domain D3H41_02820 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily D3H41_02820 IPR042119 QueA, domain 2 D3H41_02820 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA D3H41_02820 IPR042118 QueA, domain 1 D3H41_02825 IPR002616 tRNA-guanine(15) transglycosylase-like D3H41_02825 IPR036511 Queuine tRNA-ribosyltransferase-like D3H41_02825 IPR004803 tRNA-guanine transglycosylase D3H41_02830 IPR003849 Preprotein translocase YajC D3H41_02835 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site D3H41_02835 IPR001036 Acriflavin resistance protein D3H41_02835 IPR027398 SecD export protein N-terminal TM domain D3H41_02835 IPR022645 Protein-export membrane protein SecD/SecF, bacterial D3H41_02835 IPR005791 Protein translocase subunit SecD D3H41_02835 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial D3H41_02840 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site D3H41_02840 IPR022645 Protein-export membrane protein SecD/SecF, bacterial D3H41_02840 IPR005665 Protein-export membrane protein SecF, bacterial D3H41_02840 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial D3H41_02855 IPR020550 Inositol monophosphatase, conserved site D3H41_02855 IPR022337 Inositol monophosphatase, SuhB D3H41_02855 IPR033942 Inositol monophosphatase D3H41_02855 IPR000760 Inositol monophosphatase-like D3H41_02855 IPR020583 Inositol monophosphatase, metal-binding site D3H41_02860 IPR029028 Alpha/beta knot methyltransferases D3H41_02860 IPR004384 RNA methyltransferase TrmJ/LasT D3H41_02860 IPR001537 tRNA/rRNA methyltransferase, SpoU type D3H41_02860 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal D3H41_02865 IPR036390 Winged helix DNA-binding domain superfamily D3H41_02865 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_02865 IPR030489 Transcription regulator Rrf2-type, conserved site D3H41_02865 IPR010242 Transcription factor HTH, IscR D3H41_02865 IPR000944 Transcription regulator Rrf2-type D3H41_02870 IPR010240 Cysteine desulfurase IscS D3H41_02870 IPR016454 Cysteine desulfurase D3H41_02870 IPR015424 Pyridoxal phosphate-dependent transferase D3H41_02870 IPR000192 Aminotransferase class V domain D3H41_02870 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 D3H41_02870 IPR015421 Pyridoxal phosphate-dependent transferase, major domain D3H41_02870 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site D3H41_02875 IPR011339 ISC system FeS cluster assembly, IscU scaffold D3H41_02875 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal D3H41_02880 IPR035903 HesB-like domain superfamily D3H41_02880 IPR017870 FeS cluster insertion, C-terminal, conserved site D3H41_02880 IPR016092 FeS cluster insertion protein D3H41_02880 IPR011302 Iron-binding protein IscA, proteobacteria D3H41_02880 IPR000361 FeS cluster biogenesis D3H41_02885 IPR001623 DnaJ domain D3H41_02885 IPR004640 Co-chaperone Hsc20 D3H41_02885 IPR036386 HscB, C-terminal domain superfamily D3H41_02885 IPR036869 Chaperone J-domain superfamily D3H41_02885 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain D3H41_02890 IPR042039 HscA chaperone, nucleotide-binding domain D3H41_02890 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily D3H41_02890 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily D3H41_02890 IPR013126 Heat shock protein 70 family D3H41_02890 IPR010236 ISC system FeS cluster assembly, HscA chaperone D3H41_02890 IPR018181 Heat shock protein 70, conserved site D3H41_02895 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria D3H41_02895 IPR036010 2Fe-2S ferredoxin-like superfamily D3H41_02895 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain D3H41_02895 IPR001055 Adrenodoxin D3H41_02895 IPR018298 Adrenodoxin, iron-sulphur binding site D3H41_02895 IPR012675 Beta-grasp domain superfamily D3H41_02900 IPR007479 ISC system FeS cluster assembly, IscX D3H41_02900 IPR036762 IscX-like superfamily D3H41_02905 IPR008330 Peptidase M17, peptidase B D3H41_02905 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal D3H41_02905 IPR001346 Interferon regulatory factor DNA-binding domain D3H41_02905 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B D3H41_02910 IPR023005 Nucleoside diphosphate kinase, active site D3H41_02910 IPR034907 Nucleoside diphosphate kinase-like domain D3H41_02910 IPR036850 Nucleoside diphosphate kinase-like domain superfamily D3H41_02910 IPR001564 Nucleoside diphosphate kinase D3H41_02915 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr D3H41_02915 IPR027492 Dual-specificity RNA methyltransferase RlmN D3H41_02915 IPR040072 Methyltransferase (Class A) D3H41_02915 IPR013785 Aldolase-type TIM barrel D3H41_02915 IPR007197 Radical SAM D3H41_02920 IPR025194 Domain of unknown function DUF4115 D3H41_02920 IPR010982 Lambda repressor-like, DNA-binding domain superfamily D3H41_02920 IPR023690 Cytoskeleton protein RodZ D3H41_02920 IPR001387 Cro/C1-type helix-turn-helix domain D3H41_02925 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type D3H41_02925 IPR011005 Dihydropteroate synthase-like D3H41_02925 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial D3H41_02930 IPR033656 Histidyl-anticodon-binding D3H41_02930 IPR015807 Histidine-tRNA ligase D3H41_02930 IPR036621 Anticodon-binding domain superfamily D3H41_02930 IPR004154 Anticodon-binding D3H41_02930 IPR006195 Aminoacyl-tRNA synthetase, class II D3H41_02930 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit D3H41_02930 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain D3H41_02935 IPR026039 Uncharacterised protein family UPF0070 D3H41_02935 IPR018704 Tetratricopeptide repeat-like domain D3H41_02935 IPR011990 Tetratricopeptide-like helical domain superfamily D3H41_02940 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat D3H41_02940 IPR017687 Outer membrane protein assembly factor BamB D3H41_02940 IPR002372 Pyrrolo-quinoline quinone repeat D3H41_02940 IPR015943 WD40/YVTN repeat-like-containing domain superfamily D3H41_02940 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily D3H41_02945 IPR015946 K homology domain-like, alpha/beta D3H41_02945 IPR031166 EngA-type guanine nucleotide-binding (G) domain D3H41_02945 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_02945 IPR005225 Small GTP-binding protein domain D3H41_02945 IPR032859 GTPase Der, C-terminal KH-domain-like D3H41_02945 IPR006073 GTP binding domain D3H41_02945 IPR003593 AAA+ ATPase domain D3H41_02945 IPR016484 GTP-binding protein EngA D3H41_02960 IPR020579 Exonuclease VII, large subunit, C-terminal D3H41_02960 IPR025824 OB-fold nucleic acid binding domain D3H41_02960 IPR003753 Exonuclease VII, large subunit D3H41_02965 IPR005990 Inosine-5'-monophosphate dehydrogenase D3H41_02965 IPR015875 IMP dehydrogenase / GMP reductase, conserved site D3H41_02965 IPR013785 Aldolase-type TIM barrel D3H41_02965 IPR000644 CBS domain D3H41_02965 IPR001093 IMP dehydrogenase/GMP reductase D3H41_02970 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3H41_02970 IPR022310 NAD/GMP synthase D3H41_02970 IPR029062 Class I glutamine amidotransferase-like D3H41_02970 IPR017926 Glutamine amidotransferase D3H41_02970 IPR001674 GMP synthase, C-terminal D3H41_02970 IPR004739 GMP synthase, glutamine amidotransferase D3H41_02970 IPR022955 GMP synthase D3H41_02970 IPR025777 GMP synthetase ATP pyrophosphatase domain D3H41_02975 IPR002104 Integrase, catalytic domain D3H41_02975 IPR013762 Integrase-like, catalytic domain superfamily D3H41_02975 IPR011010 DNA breaking-rejoining enzyme, catalytic core D3H41_02975 IPR038488 Integrase, DNA-binding domain superfamily D3H41_02975 IPR025166 Integrase, DNA-binding domain D3H41_02975 IPR010998 Integrase/recombinase, N-terminal D3H41_03015 IPR040677 Large polyvalent protein-associated domain 7 D3H41_03015 IPR005094 Endonuclease relaxase, MobA/VirD2 D3H41_03080 IPR020846 Major facilitator superfamily domain D3H41_03080 IPR011701 Major facilitator superfamily D3H41_03080 IPR036259 MFS transporter superfamily D3H41_03080 IPR005829 Sugar transporter, conserved site D3H41_03080 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG D3H41_03085 IPR009057 Homeobox-like domain superfamily D3H41_03085 IPR001647 DNA-binding HTH domain, TetR-type D3H41_03085 IPR023772 DNA-binding HTH domain, TetR-type, conserved site D3H41_03085 IPR004111 Tetracycline repressor TetR, C-terminal D3H41_03085 IPR003012 Tetracycline transcriptional regulator, TetR D3H41_03085 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily D3H41_03100 IPR024072 Dihydrofolate reductase-like domain superfamily D3H41_03100 IPR012259 Dihydrofolate reductase D3H41_03100 IPR017925 Dihydrofolate reductase conserved site D3H41_03100 IPR001796 Dihydrofolate reductase domain D3H41_03120 IPR011701 Major facilitator superfamily D3H41_03120 IPR020846 Major facilitator superfamily domain D3H41_03120 IPR036259 MFS transporter superfamily D3H41_03120 IPR004812 Drug resistance transporter Bcr/CmlA subfamily D3H41_03135 IPR006352 Phosphoglucosamine mutase, bacterial type D3H41_03135 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II D3H41_03135 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III D3H41_03135 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III D3H41_03135 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I D3H41_03135 IPR005843 Alpha-D-phosphohexomutase, C-terminal D3H41_03135 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily D3H41_03135 IPR005841 Alpha-D-phosphohexomutase superfamily D3H41_03140 IPR000489 Pterin-binding domain D3H41_03140 IPR011005 Dihydropteroate synthase-like D3H41_03140 IPR006390 Dihydropteroate synthase D3H41_03150 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal D3H41_03155 IPR003610 Carbohydrate-binding module family 5/12 D3H41_03155 IPR017853 Glycoside hydrolase superfamily D3H41_03155 IPR029070 Chitinase insertion domain superfamily D3H41_03155 IPR009470 Chitinase, C-terminal D3H41_03155 IPR013783 Immunoglobulin-like fold D3H41_03155 IPR001223 Glycoside hydrolase family 18, catalytic domain D3H41_03155 IPR036573 Carbohydrate-binding module superfamily 5/12 D3H41_03155 IPR011583 Chitinase II D3H41_03160 IPR000791 Acetate transporter GPR1/FUN34/SatP family D3H41_03165 IPR001463 Sodium:alanine symporter D3H41_03170 IPR036188 FAD/NAD(P)-binding domain superfamily D3H41_03170 IPR006076 FAD dependent oxidoreductase D3H41_03170 IPR023080 D-amino acid dehydrogenase DadA D3H41_03180 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase D3H41_03180 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme D3H41_03180 IPR015424 Pyridoxal phosphate-dependent transferase D3H41_03180 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 D3H41_03180 IPR015421 Pyridoxal phosphate-dependent transferase, major domain D3H41_03185 IPR015421 Pyridoxal phosphate-dependent transferase, major domain D3H41_03185 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 D3H41_03185 IPR015424 Pyridoxal phosphate-dependent transferase D3H41_03185 IPR005814 Aminotransferase class-III D3H41_03205 IPR001110 Uncharacterised protein family UPF0012, conserved site D3H41_03205 IPR000182 GNAT domain D3H41_03205 IPR036526 Carbon-nitrogen hydrolase superfamily D3H41_03205 IPR003010 Carbon-nitrogen hydrolase D3H41_03205 IPR016181 Acyl-CoA N-acyltransferase D3H41_03210 IPR000847 Transcription regulator HTH, LysR D3H41_03210 IPR005119 LysR, substrate-binding D3H41_03210 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_03210 IPR036390 Winged helix DNA-binding domain superfamily D3H41_03235 IPR023620 Small protein B D3H41_03235 IPR000037 SsrA-binding protein D3H41_03235 IPR020081 SsrA-binding protein, conserved site D3H41_03240 IPR005031 Coenzyme Q-binding protein COQ10, START domain D3H41_03240 IPR023393 START-like domain superfamily D3H41_03245 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp D3H41_03245 IPR037021 RnfH superfamily D3H41_03245 IPR005346 RnfH protein D3H41_03250 IPR007450 Lipoprotein SmpA/OmlA D3H41_03250 IPR037873 BamE-like D3H41_03250 IPR026592 Outer membrane protein assembly factor BamE D3H41_03260 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_03260 IPR004604 DNA recombination/repair protein RecN D3H41_03260 IPR003395 RecF/RecN/SMC, N-terminal D3H41_03270 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal D3H41_03270 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal D3H41_03270 IPR002504 NAD kinase D3H41_03270 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily D3H41_03275 IPR009012 GrpE nucleotide exchange factor, head D3H41_03275 IPR013805 GrpE nucleotide exchange factor, coiled-coil D3H41_03275 IPR000740 GrpE nucleotide exchange factor D3H41_03280 IPR023954 C4-dicarboxylate transport protein D3H41_03280 IPR001991 Sodium:dicarboxylate symporter D3H41_03280 IPR018107 Sodium:dicarboxylate symporter, conserved site D3H41_03280 IPR036458 Sodium:dicarboxylate symporter superfamily D3H41_03285 IPR013126 Heat shock protein 70 family D3H41_03285 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily D3H41_03285 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily D3H41_03285 IPR018181 Heat shock protein 70, conserved site D3H41_03285 IPR012725 Chaperone DnaK D3H41_03290 IPR002939 Chaperone DnaJ, C-terminal D3H41_03290 IPR036869 Chaperone J-domain superfamily D3H41_03290 IPR008971 HSP40/DnaJ peptide-binding D3H41_03290 IPR001305 Heat shock protein DnaJ, cysteine-rich domain D3H41_03290 IPR001623 DnaJ domain D3H41_03290 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily D3H41_03290 IPR012724 Chaperone DnaJ D3H41_03290 IPR018253 DnaJ domain, conserved site D3H41_03320 IPR011540 AbgT, Proteobacteria D3H41_03320 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT D3H41_03325 IPR028883 tRNA-specific adenosine deaminase D3H41_03325 IPR016192 APOBEC/CMP deaminase, zinc-binding D3H41_03325 IPR016193 Cytidine deaminase-like D3H41_03325 IPR002125 Cytidine and deoxycytidylate deaminase domain D3H41_03335 IPR023346 Lysozyme-like domain superfamily D3H41_03335 IPR023703 Membrane-bound lytic murein transglycosylase F D3H41_03335 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF D3H41_03335 IPR000189 Prokaryotic transglycosylase, active site D3H41_03335 IPR008258 Transglycosylase SLT domain 1 D3H41_03340 IPR010918 PurM-like, C-terminal domain D3H41_03340 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain D3H41_03340 IPR036921 PurM-like, N-terminal domain superfamily D3H41_03340 IPR036676 PurM-like, C-terminal domain superfamily D3H41_03340 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily D3H41_03340 IPR010073 Phosphoribosylformylglycinamidine synthase PurL D3H41_03340 IPR017926 Glutamine amidotransferase D3H41_03340 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal D3H41_03340 IPR029062 Class I glutamine amidotransferase-like D3H41_03355 IPR011276 TonB-dependent haem/haemoglobin receptor D3H41_03355 IPR000531 TonB-dependent receptor-like, beta-barrel D3H41_03355 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor D3H41_03355 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D3H41_03355 IPR039426 Vitamin B12 transporter BtuB-like D3H41_03355 IPR012910 TonB-dependent receptor, plug domain D3H41_03355 IPR010917 TonB-dependent receptor, conserved site D3H41_03355 IPR037066 TonB-dependent receptor, plug domain superfamily D3H41_03370 IPR001160 Peptidase M20C, Xaa-His dipeptidase D3H41_03370 IPR011650 Peptidase M20, dimerisation domain D3H41_03370 IPR002933 Peptidase M20 D3H41_03375 IPR026033 Azaguanine-like transporters D3H41_03375 IPR006043 Xanthine/uracil/vitamin C permease D3H41_03380 IPR000836 Phosphoribosyltransferase domain D3H41_03380 IPR029057 Phosphoribosyltransferase-like D3H41_03380 IPR023747 Xanthine-guanine phosphoribosyltransferase D3H41_03390 IPR038208 Sigma factor-binding protein Crl superfamily D3H41_03390 IPR009986 Sigma factor-binding transcriptional regulator Crl D3H41_03395 IPR036393 Acetylglutamate kinase-like superfamily D3H41_03395 IPR001048 Aspartate/glutamate/uridylate kinase D3H41_03395 IPR041739 Glutamate-5-kinase domain D3H41_03395 IPR011529 Glutamate 5-kinase D3H41_03395 IPR001057 Glutamate/acetylglutamate kinase D3H41_03395 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase D3H41_03395 IPR002478 PUA domain D3H41_03395 IPR019797 Glutamate 5-kinase, conserved site D3H41_03395 IPR015947 PUA-like superfamily D3H41_03395 IPR036974 PUA domain superfamily D3H41_03400 IPR012134 Glutamate-5-semialdehyde dehydrogenase D3H41_03400 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site D3H41_03400 IPR015590 Aldehyde dehydrogenase domain D3H41_03400 IPR016161 Aldehyde/histidinol dehydrogenase D3H41_03400 IPR016163 Aldehyde dehydrogenase, C-terminal D3H41_03400 IPR000965 GPR domain D3H41_03400 IPR016162 Aldehyde dehydrogenase, N-terminal D3H41_03405 IPR005144 ATP-cone domain D3H41_03405 IPR003796 Ribonucleotide reductase regulator NrdR-like D3H41_03410 IPR024072 Dihydrofolate reductase-like domain superfamily D3H41_03410 IPR011549 Riboflavin-specific deaminase, C-terminal D3H41_03410 IPR016193 Cytidine deaminase-like D3H41_03410 IPR004794 Riboflavin biosynthesis protein RibD D3H41_03410 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal D3H41_03410 IPR002125 Cytidine and deoxycytidylate deaminase domain D3H41_03410 IPR016192 APOBEC/CMP deaminase, zinc-binding D3H41_03415 IPR026017 Lumazine-binding domain D3H41_03415 IPR001783 Lumazine-binding protein D3H41_03415 IPR017938 Riboflavin synthase-like beta-barrel D3H41_03415 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily D3H41_03420 IPR036144 RibA-like superfamily D3H41_03420 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB D3H41_03420 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily D3H41_03420 IPR032677 GTP cyclohydrolase II D3H41_03425 IPR036467 Lumazine/riboflavin synthase superfamily D3H41_03425 IPR002180 Lumazine/riboflavin synthase D3H41_03425 IPR034964 Lumazine synthase D3H41_03430 IPR006027 NusB/RsmB/TIM44 D3H41_03430 IPR011605 NusB antitermination factor D3H41_03430 IPR035926 NusB-like superfamily D3H41_03435 IPR016188 PurM-like, N-terminal domain D3H41_03435 IPR006283 Thiamine-monophosphate kinase D3H41_03435 IPR036921 PurM-like, N-terminal domain superfamily D3H41_03435 IPR036676 PurM-like, C-terminal domain superfamily D3H41_03435 IPR010918 PurM-like, C-terminal domain D3H41_03440 IPR007686 YutG/PgpA domain D3H41_03440 IPR036681 PgpA-like superfamily D3H41_03440 IPR026037 Phosphatidylglycerophosphatase A D3H41_03445 IPR033248 Transketolase, C-terminal domain D3H41_03445 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II D3H41_03445 IPR005475 Transketolase-like, pyrimidine-binding domain D3H41_03445 IPR005474 Transketolase, N-terminal D3H41_03445 IPR005477 Deoxyxylulose-5-phosphate synthase D3H41_03445 IPR029061 Thiamin diphosphate-binding fold D3H41_03445 IPR020826 Transketolase binding site D3H41_03450 IPR033749 Polyprenyl synthetase, conserved site D3H41_03450 IPR000092 Polyprenyl synthetase D3H41_03450 IPR008949 Isoprenoid synthase domain superfamily D3H41_03455 IPR003761 Exonuclease VII, small subunit D3H41_03455 IPR037004 Exonuclease VII, small subunit superfamily D3H41_03460 IPR002898 MotA/TolQ/ExbB proton channel D3H41_03460 IPR000540 Flagellar motor protein MotA, conserved site D3H41_03465 IPR036737 OmpA-like domain superfamily D3H41_03465 IPR006665 OmpA-like domain D3H41_03465 IPR025713 Motility protein B, N-terminal domain D3H41_03470 IPR003720 tRNA sulfurtransferase ThiI D3H41_03470 IPR004114 THUMP domain D3H41_03470 IPR020536 Thil, AANH domain D3H41_03470 IPR026340 Thiazole biosynthesis domain D3H41_03470 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3H41_03470 IPR036873 Rhodanese-like domain superfamily D3H41_03470 IPR001763 Rhodanese-like domain D3H41_03475 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_03475 IPR036390 Winged helix DNA-binding domain superfamily D3H41_03475 IPR005119 LysR, substrate-binding D3H41_03475 IPR000847 Transcription regulator HTH, LysR D3H41_03485 IPR006696 Protein of unknown function DUF423 D3H41_03490 IPR040739 RlmM ferredoxin-like domain D3H41_03490 IPR002877 Ribosomal RNA methyltransferase FtsJ domain D3H41_03490 IPR011224 Ribosomal RNA large subunit methyltransferase M D3H41_03490 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3H41_03495 IPR029060 PIN-like domain superfamily D3H41_03495 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal D3H41_03495 IPR002421 5'-3' exonuclease, N-terminal D3H41_03495 IPR008918 Helix-hairpin-helix motif, class 2 D3H41_03495 IPR038969 Flap endonuclease D3H41_03495 IPR036279 5'-3' exonuclease, C-terminal domain superfamily D3H41_03495 IPR020045 DNA polymerase I-like, H3TH domain D3H41_03495 IPR022895 Flap endonuclease Xni D3H41_03500 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily D3H41_03500 IPR031100 LOG family D3H41_03500 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal D3H41_03500 IPR021826 Domain of unknown function DUF3412 D3H41_03505 IPR000160 GGDEF domain D3H41_03505 IPR029787 Nucleotide cyclase D3H41_03505 IPR001789 Signal transduction response regulator, receiver domain D3H41_03505 IPR011006 CheY-like superfamily D3H41_03515 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal D3H41_03515 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 D3H41_03515 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF D3H41_03520 IPR009948 Syd D3H41_03520 IPR038228 Syd superfamily D3H41_03525 IPR016908 Uncharacterised conserved protein UCP029037 D3H41_03530 IPR004872 Lipoprotein NlpA family D3H41_03535 IPR000515 ABC transporter type 1, transmembrane domain MetI-like D3H41_03535 IPR035906 MetI-like superfamily D3H41_03540 IPR017871 ABC transporter, conserved site D3H41_03540 IPR003593 AAA+ ATPase domain D3H41_03540 IPR026253 Methionine import ATP-binding protein MetN D3H41_03540 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria D3H41_03540 IPR003439 ABC transporter-like D3H41_03540 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal D3H41_03540 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain D3H41_03540 IPR018449 NIL domain D3H41_03540 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_03545 IPR036412 HAD-like superfamily D3H41_03545 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase D3H41_03545 IPR006543 Histidinol-phosphate phosphatase D3H41_03545 IPR006549 HAD-superfamily hydrolase,subfamily IIIA D3H41_03545 IPR023214 HAD superfamily D3H41_03550 IPR012771 Trehalose operon repressor D3H41_03550 IPR000843 LacI-type HTH domain D3H41_03550 IPR028082 Periplasmic binding protein-like I D3H41_03550 IPR010982 Lambda repressor-like, DNA-binding domain superfamily D3H41_03555 IPR013013 Phosphotransferase system, EIIC component, type 1 D3H41_03555 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component D3H41_03555 IPR001996 Phosphotransferase system, IIB component, type 1 D3H41_03555 IPR003352 Phosphotransferase system, EIIC D3H41_03555 IPR036878 Glucose permease domain IIB D3H41_03555 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site D3H41_03555 IPR011296 Phosphotransferase system, trehalose-specific IIBC component D3H41_03560 IPR006047 Glycosyl hydrolase, family 13, catalytic domain D3H41_03560 IPR013780 Glycosyl hydrolase, all-beta D3H41_03560 IPR017853 Glycoside hydrolase superfamily D3H41_03560 IPR012769 Trehalose-6-phosphate hydrolase D3H41_03560 IPR032091 Maltogenic Amylase, C-terminal D3H41_03575 IPR019264 Domain of unknown function DUF2179 D3H41_03575 IPR003740 Uncharacterised membrane protein YitT D3H41_03575 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal D3H41_03580 IPR015424 Pyridoxal phosphate-dependent transferase D3H41_03580 IPR001085 Serine hydroxymethyltransferase D3H41_03580 IPR015421 Pyridoxal phosphate-dependent transferase, major domain D3H41_03580 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site D3H41_03580 IPR039429 Serine hydroxymethyltransferase-like domain D3H41_03580 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 D3H41_03585 IPR007197 Radical SAM D3H41_03585 IPR003698 Lipoyl synthase D3H41_03585 IPR031691 Lipoyl synthase, N-terminal D3H41_03585 IPR006638 Elp3/MiaB/NifB D3H41_03585 IPR013785 Aldolase-type TIM barrel D3H41_03590 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain D3H41_03590 IPR000544 Octanoyltransferase D3H41_03590 IPR020605 Octanoyltransferase, conserved site D3H41_03595 IPR027471 YbeD-like domain superfamily D3H41_03595 IPR007454 Uncharacterised protein family UPF0250 D3H41_03600 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily D3H41_03600 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A D3H41_03600 IPR012338 Beta-lactamase/transpeptidase-like D3H41_03600 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal D3H41_03600 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal D3H41_03600 IPR015956 Penicillin-binding protein, C-terminal domain superfamily D3H41_03605 IPR036680 Sporulation-like domain superfamily D3H41_03605 IPR007730 Sporulation-like domain D3H41_03605 IPR012997 Rare lipoprotein A D3H41_03605 IPR034718 Endolytic peptidoglycan transglycosylase RlpA D3H41_03605 IPR009009 RlpA-like protein, double-psi beta-barrel domain D3H41_03605 IPR036908 RlpA-like domain superfamily D3H41_03610 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB D3H41_03610 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site D3H41_03610 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA D3H41_03615 IPR012338 Beta-lactamase/transpeptidase-like D3H41_03615 IPR036138 Penicillin-binding protein, dimerisation domain superfamily D3H41_03615 IPR001460 Penicillin-binding protein, transpeptidase D3H41_03615 IPR005311 Penicillin-binding protein, dimerisation domain D3H41_03615 IPR017790 Penicillin-binding protein 2 D3H41_03620 IPR003742 RNA methyltransferase RlmH D3H41_03620 IPR029028 Alpha/beta knot methyltransferases D3H41_03620 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal D3H41_03625 IPR004394 Protein Iojap/ribosomal silencing factor RsfS D3H41_03630 IPR032780 DNA polymerase III subunit delta, C-terminal D3H41_03630 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal D3H41_03630 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_03630 IPR005790 DNA polymerase III, delta subunit D3H41_03630 IPR010372 DNA polymerase III delta, N-terminal D3H41_03635 IPR007485 LPS-assembly lipoprotein LptE D3H41_03640 IPR025709 Leucyl-tRNA synthetase, editing domain D3H41_03640 IPR002300 Aminoacyl-tRNA synthetase, class Ia D3H41_03640 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site D3H41_03640 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding D3H41_03640 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3H41_03640 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding D3H41_03640 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain D3H41_03640 IPR002302 Leucine-tRNA ligase D3H41_03645 IPR009912 Zinc-ribbon containing domain D3H41_03650 IPR036526 Carbon-nitrogen hydrolase superfamily D3H41_03650 IPR003010 Carbon-nitrogen hydrolase D3H41_03650 IPR004563 Apolipoprotein N-acyltransferase D3H41_03655 IPR005170 Transporter-associated domain D3H41_03655 IPR000644 CBS domain D3H41_03655 IPR036318 FAD-binding, type PCMH-like superfamily D3H41_03655 IPR016169 FAD-binding, type PCMH, subdomain 2 D3H41_03660 IPR020549 Endoribonuclease YbeY, conserved site D3H41_03660 IPR023091 Metalloprotease catalytic domain superfamily, predicted D3H41_03660 IPR002036 Endoribonuclease YbeY D3H41_03665 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_03665 IPR003714 PhoH-like protein D3H41_03670 IPR020612 Methylthiotransferase, conserved site D3H41_03670 IPR013848 Methylthiotransferase, N-terminal D3H41_03670 IPR023404 Radical SAM, alpha/beta horseshoe D3H41_03670 IPR002792 TRAM domain D3H41_03670 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB D3H41_03670 IPR038135 Methylthiotransferase, N-terminal domain superfamily D3H41_03670 IPR006638 Elp3/MiaB/NifB D3H41_03670 IPR007197 Radical SAM D3H41_03670 IPR005839 Methylthiotransferase D3H41_03680 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 D3H41_03680 IPR002938 FAD-binding domain D3H41_03680 IPR036188 FAD/NAD(P)-binding domain superfamily D3H41_03680 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site D3H41_03790 IPR012676 TGS-like D3H41_03790 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 D3H41_03790 IPR013029 YchF, C-terminal domain D3H41_03790 IPR041706 YchF, N-terminal D3H41_03790 IPR004095 TGS D3H41_03790 IPR023192 TGS-like domain superfamily D3H41_03790 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_03790 IPR006073 GTP binding domain D3H41_03790 IPR031167 OBG-type guanine nucleotide-binding (G) domain D3H41_03790 IPR012675 Beta-grasp domain superfamily D3H41_03795 IPR018171 Peptidyl-tRNA hydrolase, conserved site D3H41_03795 IPR036416 Peptidyl-tRNA hydrolase superfamily D3H41_03795 IPR001328 Peptidyl-tRNA hydrolase D3H41_03800 IPR000836 Phosphoribosyltransferase domain D3H41_03800 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain D3H41_03800 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type D3H41_03800 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site D3H41_03800 IPR029057 Phosphoribosyltransferase-like D3H41_03800 IPR005946 Ribose-phosphate pyrophosphokinase D3H41_03805 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase D3H41_03805 IPR006204 GHMP kinase N-terminal domain D3H41_03805 IPR013750 GHMP kinase, C-terminal domain D3H41_03805 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D3H41_03805 IPR036554 GHMP kinase, C-terminal domain superfamily D3H41_03805 IPR020568 Ribosomal protein S5 domain 2-type fold D3H41_03810 IPR004565 Outer membrane lipoprotein LolB D3H41_03810 IPR029046 Lipoprotein localisation LolA/LolB/LppX D3H41_03815 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily D3H41_03815 IPR018214 Glutamyl-tRNA reductase, conserved site D3H41_03815 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal D3H41_03815 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain D3H41_03815 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily D3H41_03815 IPR036291 NAD(P)-binding domain superfamily D3H41_03815 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase D3H41_03815 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase D3H41_03820 IPR000352 Peptide chain release factor class I D3H41_03820 IPR004373 Peptide chain release factor 1 D3H41_03820 IPR005139 Peptide chain release factor D3H41_03825 IPR002052 DNA methylase, N-6 adenine-specific, conserved site D3H41_03825 IPR004556 Methyltransferase HemK-like D3H41_03825 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3H41_03825 IPR025714 Methyltransferase domain D3H41_03825 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific D3H41_03825 IPR040758 Release factor glutamine methyltransferase, N-terminal domain D3H41_03830 IPR007360 Invasion gene expression up-regulator, SirB D3H41_03835 IPR032698 Protein SirB1, N-terminal D3H41_03835 IPR011990 Tetratricopeptide-like helical domain superfamily D3H41_03840 IPR006269 3-deoxy-8-phosphooctulonate synthase D3H41_03840 IPR013785 Aldolase-type TIM barrel D3H41_03840 IPR006218 DAHP synthetase I/KDSA D3H41_03845 IPR029052 Metallo-dependent phosphatase-like D3H41_03845 IPR006179 5'-Nucleotidase/apyrase D3H41_03845 IPR008334 5'-Nucleotidase, C-terminal D3H41_03845 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type D3H41_03845 IPR036907 5'-Nucleotidase, C-terminal domain superfamily D3H41_03845 IPR006146 5'-Nucleotidase, conserved site D3H41_03850 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC D3H41_03850 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily D3H41_03850 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain D3H41_03855 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain D3H41_03855 IPR036986 RNA-binding S4 domain superfamily D3H41_03855 IPR020103 Pseudouridine synthase, catalytic domain superfamily D3H41_03855 IPR006145 Pseudouridine synthase, RsuA/RluA D3H41_03855 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F D3H41_03855 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site D3H41_03855 IPR002942 RNA-binding S4 domain D3H41_03860 IPR002625 Smr domain D3H41_03860 IPR036063 Smr domain superfamily D3H41_03885 IPR029018 Beta-hexosaminidase-like, domain 2 D3H41_03885 IPR004867 Chitobiase C-terminal domain D3H41_03885 IPR025705 Beta-hexosaminidase D3H41_03885 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain D3H41_03885 IPR015883 Glycoside hydrolase family 20, catalytic domain D3H41_03885 IPR017853 Glycoside hydrolase superfamily D3H41_03885 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily D3H41_03885 IPR014756 Immunoglobulin E-set D3H41_03885 IPR012291 CBM2, carbohydrate-binding domain superfamily D3H41_03885 IPR013783 Immunoglobulin-like fold D3H41_03885 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal D3H41_03900 IPR023214 HAD superfamily D3H41_03900 IPR006121 Heavy metal-associated domain, HMA D3H41_03900 IPR008250 P-type ATPase, A domain superfamily D3H41_03900 IPR036163 Heavy metal-associated domain superfamily D3H41_03900 IPR027256 P-type ATPase, subfamily IB D3H41_03900 IPR036412 HAD-like superfamily D3H41_03900 IPR001757 P-type ATPase D3H41_03900 IPR017969 Heavy-metal-associated, conserved site D3H41_03900 IPR023298 P-type ATPase, transmembrane domain superfamily D3H41_03900 IPR018303 P-type ATPase, phosphorylation site D3H41_03900 IPR023299 P-type ATPase, cytoplasmic domain N D3H41_03910 IPR033900 Porin domain, Gram-negative type D3H41_03910 IPR023614 Porin domain superfamily D3H41_03910 IPR001702 Porin, Gram-negative type D3H41_03910 IPR002299 Porin, Neisseria sp. type D3H41_03915 IPR018635 Uncharacterised protein family UPF0319 D3H41_03920 IPR033910 Glutamyl-tRNA synthetase D3H41_03920 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3H41_03920 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain D3H41_03920 IPR000924 Glutamyl/glutaminyl-tRNA synthetase D3H41_03920 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial D3H41_03920 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site D3H41_03920 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 D3H41_03920 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding D3H41_03925 IPR006664 Outer membrane protein, bacterial D3H41_03925 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel D3H41_03925 IPR006690 Outer membrane protein, OmpA-like, conserved site D3H41_03925 IPR006665 OmpA-like domain D3H41_03925 IPR002368 Outer membrane protein, OmpA D3H41_03925 IPR000498 Outer membrane protein OmpA-like, transmembrane domain D3H41_03925 IPR036737 OmpA-like domain superfamily D3H41_03970 IPR024181 Chemotaxis response regulator CheV D3H41_03970 IPR036061 CheW-like domain superfamily D3H41_03970 IPR002545 CheW-like domain D3H41_03970 IPR011006 CheY-like superfamily D3H41_03970 IPR001789 Signal transduction response regulator, receiver domain D3H41_03975 IPR000780 MCP methyltransferase, CheR-type D3H41_03975 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal D3H41_03975 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal D3H41_03975 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily D3H41_03975 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3H41_03980 IPR019776 Flagellar basal body rod protein, conserved site D3H41_03980 IPR006300 Flagellar basal-body rod protein FlgB D3H41_03980 IPR001444 Flagellar basal body rod protein, N-terminal D3H41_03985 IPR006299 Flagellar basal-body rod protein FlgC D3H41_03985 IPR019776 Flagellar basal body rod protein, conserved site D3H41_03985 IPR001444 Flagellar basal body rod protein, N-terminal D3H41_03985 IPR010930 Flagellar basal-body/hook protein, C-terminal domain D3H41_03990 IPR025963 FlgD Tudor-like domain D3H41_03990 IPR005648 Flagellar hook capping protein D3H41_03990 IPR025965 FlgD Ig-like domain D3H41_03995 IPR010930 Flagellar basal-body/hook protein, C-terminal domain D3H41_03995 IPR020013 Flagellar hook-basal body protein, FlgE/F/G D3H41_03995 IPR019776 Flagellar basal body rod protein, conserved site D3H41_03995 IPR001444 Flagellar basal body rod protein, N-terminal D3H41_03995 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like D3H41_03995 IPR037058 Flagellar hook protein FlgE superfamily D3H41_03995 IPR011491 Flagellar hook protein FlgE D3H41_04000 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like D3H41_04000 IPR001444 Flagellar basal body rod protein, N-terminal D3H41_04000 IPR020013 Flagellar hook-basal body protein, FlgE/F/G D3H41_04000 IPR010930 Flagellar basal-body/hook protein, C-terminal domain D3H41_04000 IPR019776 Flagellar basal body rod protein, conserved site D3H41_04005 IPR001444 Flagellar basal body rod protein, N-terminal D3H41_04005 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like D3H41_04005 IPR010930 Flagellar basal-body/hook protein, C-terminal domain D3H41_04005 IPR020013 Flagellar hook-basal body protein, FlgE/F/G D3H41_04005 IPR019776 Flagellar basal body rod protein, conserved site D3H41_04005 IPR012834 Flagellar basal-body rod FlgG D3H41_04010 IPR000527 Flagellar L-ring protein D3H41_04015 IPR001782 Flagellar P-ring protein D3H41_04020 IPR019301 Flagellar protein FlgJ, N-terminal D3H41_04020 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain D3H41_04020 IPR013377 Peptidoglycan hydrolase FlgJ D3H41_04025 IPR002371 Flagellar hook-associated protein 1 D3H41_04025 IPR010810 Flagellin hook, IN motif D3H41_04025 IPR010930 Flagellar basal-body/hook protein, C-terminal domain D3H41_04030 IPR013384 Flagellar hook-associated protein 3 D3H41_04030 IPR001029 Flagellin, D0/D1 domain D3H41_04035 IPR042187 Flagellin, C-terminal domain, subdomain 2 D3H41_04035 IPR010810 Flagellin hook, IN motif D3H41_04035 IPR001492 Flagellin D3H41_04035 IPR001029 Flagellin, D0/D1 domain D3H41_04045 IPR001492 Flagellin D3H41_04045 IPR010810 Flagellin hook, IN motif D3H41_04045 IPR001029 Flagellin, D0/D1 domain D3H41_04045 IPR042187 Flagellin, C-terminal domain, subdomain 2 D3H41_04050 IPR001492 Flagellin D3H41_04050 IPR001029 Flagellin, D0/D1 domain D3H41_04050 IPR010810 Flagellin hook, IN motif D3H41_04060 IPR011055 Duplicated hybrid motif D3H41_04060 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 D3H41_04065 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily D3H41_04065 IPR008279 PEP-utilising enzyme, mobile domain D3H41_04065 IPR024692 Phosphotransferase system, enzyme I D3H41_04065 IPR006318 Phosphotransferase system, enzyme I-like D3H41_04065 IPR000121 PEP-utilising enzyme, C-terminal D3H41_04065 IPR023151 PEP-utilising enzyme, conserved site D3H41_04065 IPR040442 Pyruvate kinase-like domain superfamily D3H41_04065 IPR018274 PEP-utilising enzyme, active site D3H41_04065 IPR008731 Phosphotransferase system, enzyme I N-terminal D3H41_04065 IPR036637 Phosphohistidine domain superfamily D3H41_04065 IPR036618 PtsI, HPr-binding domain superfamily D3H41_04070 IPR035895 HPr-like superfamily D3H41_04070 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site D3H41_04070 IPR002114 Phosphotransferase system, HPr serine phosphorylation site D3H41_04070 IPR000032 Phosphocarrier protein HPr-like D3H41_04080 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site D3H41_04080 IPR005856 Cysteine synthase D3H41_04080 IPR005859 Cysteine synthase CysK D3H41_04080 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme D3H41_04080 IPR001926 Pyridoxal-phosphate dependent enzyme D3H41_04085 IPR022985 Sulfate transporter CysZ D3H41_04090 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily D3H41_04090 IPR011919 Cell division protein ZipA D3H41_04090 IPR007449 ZipA, C-terminal FtsZ-binding domain D3H41_04095 IPR033136 NAD-dependent DNA ligase, conserved site D3H41_04095 IPR013839 NAD-dependent DNA ligase, adenylation D3H41_04095 IPR036420 BRCT domain superfamily D3H41_04095 IPR041663 DisA/LigA, helix-hairpin-helix motif D3H41_04095 IPR013840 NAD-dependent DNA ligase, N-terminal D3H41_04095 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 D3H41_04095 IPR012340 Nucleic acid-binding, OB-fold D3H41_04095 IPR001357 BRCT domain D3H41_04095 IPR018239 NAD-dependent DNA ligase, active site D3H41_04095 IPR004150 NAD-dependent DNA ligase, OB-fold D3H41_04095 IPR001679 NAD-dependent DNA ligase D3H41_04095 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type D3H41_04095 IPR010994 RuvA domain 2-like D3H41_04100 IPR023614 Porin domain superfamily D3H41_04100 IPR005318 Outer membrane porin, bacterial D3H41_04120 IPR001972 Stomatin family D3H41_04120 IPR032435 Band 7, C-terminal extension D3H41_04120 IPR036013 Band 7/SPFH domain superfamily D3H41_04120 IPR018080 Band 7/stomatin-like, conserved site D3H41_04120 IPR001107 Band 7 domain D3H41_04125 IPR013766 Thioredoxin domain D3H41_04125 IPR011990 Tetratricopeptide-like helical domain superfamily D3H41_04125 IPR036249 Thioredoxin-like superfamily D3H41_04135 IPR020904 Short-chain dehydrogenase/reductase, conserved site D3H41_04135 IPR002347 Short-chain dehydrogenase/reductase SDR D3H41_04135 IPR036291 NAD(P)-binding domain superfamily D3H41_04140 IPR010099 Epimerase family protein SDR39U1 D3H41_04140 IPR036291 NAD(P)-binding domain superfamily D3H41_04140 IPR001509 NAD-dependent epimerase/dehydratase D3H41_04140 IPR013549 Domain of unknown function DUF1731 D3H41_04145 IPR011435 Na(+), Li(+), K(+)/H(+) antiporter subunit A/B D3H41_04150 IPR011435 Na(+), Li(+), K(+)/H(+) antiporter subunit A/B D3H41_04170 IPR000979 Phosphodiesterase MJ0936/Vps29 D3H41_04170 IPR029052 Metallo-dependent phosphatase-like D3H41_04170 IPR020935 Phosphodiesterase YfcE, conserved site D3H41_04170 IPR041802 YfcE-like, metallophosphatase domain D3H41_04170 IPR024654 Calcineurin-like phosphoesterase domain, lpxH-type D3H41_04185 IPR035288 Trans-membrane regulatory protein ToxS D3H41_04190 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_04190 IPR039420 Transcriptional regulatory protein WalR-like D3H41_04190 IPR016032 Signal transduction response regulator, C-terminal effector D3H41_04190 IPR001867 OmpR/PhoB-type DNA-binding domain D3H41_04195 IPR037196 HSP90, C-terminal domain D3H41_04195 IPR001404 Heat shock protein Hsp90 family D3H41_04195 IPR020568 Ribosomal protein S5 domain 2-type fold D3H41_04195 IPR020575 Heat shock protein Hsp90, N-terminal D3H41_04195 IPR003594 Histidine kinase/HSP90-like ATPase D3H41_04195 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3H41_04195 IPR019805 Heat shock protein Hsp90, conserved site D3H41_04200 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_04200 IPR006259 Adenylate kinase subfamily D3H41_04200 IPR000850 Adenylate kinase/UMP-CMP kinase D3H41_04200 IPR033690 Adenylate kinase, conserved site D3H41_04200 IPR007862 Adenylate kinase, active site lid domain D3H41_04205 IPR033659 Ferrochelatase, N-terminal D3H41_04205 IPR033644 Ferrochelatase, C-terminal D3H41_04205 IPR019772 Ferrochelatase, active site D3H41_04205 IPR001015 Ferrochelatase D3H41_04210 IPR036259 MFS transporter superfamily D3H41_04210 IPR020846 Major facilitator superfamily domain D3H41_04210 IPR000109 Proton-dependent oligopeptide transporter family D3H41_04210 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site D3H41_04210 IPR005279 Dipeptide/tripeptide permease D3H41_04215 IPR036735 NusG, N-terminal domain superfamily D3H41_04215 IPR006645 NusG, N-terminal D3H41_04215 IPR010215 Transcription antitermination protein RfaH D3H41_04220 IPR029055 Nucleophile aminohydrolases, N-terminal D3H41_04220 IPR033738 Asparagine synthase, N-terminal domain D3H41_04220 IPR001962 Asparagine synthase D3H41_04220 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3H41_04220 IPR006426 Asparagine synthase, glutamine-hydrolyzing D3H41_04220 IPR017932 Glutamine amidotransferase type 2 domain D3H41_04225 IPR036291 NAD(P)-binding domain superfamily D3H41_04225 IPR006153 Cation/H+ exchanger D3H41_04225 IPR003148 Regulator of K+ conductance, N-terminal D3H41_04225 IPR038770 Sodium/solute symporter superfamily D3H41_04225 IPR004771 K+/H+ exchanger D3H41_04230 IPR036390 Winged helix DNA-binding domain superfamily D3H41_04230 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_04230 IPR000600 ROK family D3H41_04230 IPR000835 MarR-type HTH domain D3H41_04235 IPR011059 Metal-dependent hydrolase, composite domain superfamily D3H41_04235 IPR003764 N-acetylglucosamine-6-phosphate deacetylase D3H41_04235 IPR006680 Amidohydrolase-related D3H41_04235 IPR032466 Metal-dependent hydrolase D3H41_04245 IPR001996 Phosphotransferase system, IIB component, type 1 D3H41_04245 IPR013013 Phosphotransferase system, EIIC component, type 1 D3H41_04245 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component D3H41_04245 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 D3H41_04245 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site D3H41_04245 IPR036878 Glucose permease domain IIB D3H41_04245 IPR011055 Duplicated hybrid motif D3H41_04245 IPR003352 Phosphotransferase system, EIIC D3H41_04250 IPR000924 Glutamyl/glutaminyl-tRNA synthetase D3H41_04250 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3H41_04250 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily D3H41_04250 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal D3H41_04250 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily D3H41_04250 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site D3H41_04250 IPR004514 Glutamine-tRNA synthetase D3H41_04250 IPR022861 Glutamine-tRNA ligase, bacterial D3H41_04250 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain D3H41_04250 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain D3H41_04255 IPR002481 Ferric-uptake regulator D3H41_04255 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_04255 IPR036390 Winged helix DNA-binding domain superfamily D3H41_04265 IPR029039 Flavoprotein-like superfamily D3H41_04265 IPR010086 Flavodoxin, long chain D3H41_04265 IPR001226 Flavodoxin, conserved site D3H41_04265 IPR008254 Flavodoxin/nitric oxide synthase D3H41_04275 IPR029058 Alpha/Beta hydrolase fold D3H41_04275 IPR000073 Alpha/beta hydrolase fold-1 D3H41_04280 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal D3H41_04280 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain D3H41_04280 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily D3H41_04280 IPR005621 Negative modulator of initiation of replication SeqA D3H41_04280 IPR010985 Ribbon-helix-helix D3H41_04280 IPR013321 Arc-type ribbon-helix-helix D3H41_04285 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III D3H41_04285 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I D3H41_04285 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily D3H41_04285 IPR016066 Alpha-D-phosphohexomutase, conserved site D3H41_04285 IPR005852 Phosphoglucomutase, alpha-D-glucose specific D3H41_04285 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II D3H41_04285 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III D3H41_04285 IPR005843 Alpha-D-phosphohexomutase, C-terminal D3H41_04295 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily D3H41_04295 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 D3H41_04300 IPR016142 Citrate synthase-like, large alpha subdomain D3H41_04300 IPR010953 Citrate synthase, type I D3H41_04300 IPR016143 Citrate synthase-like, small alpha subdomain D3H41_04300 IPR019810 Citrate synthase active site D3H41_04300 IPR024176 Citrate synthase, bacterial-type D3H41_04300 IPR036969 Citrate synthase superfamily D3H41_04300 IPR002020 Citrate synthase D3H41_04305 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit D3H41_04305 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit D3H41_04305 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit D3H41_04305 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site D3H41_04310 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor D3H41_04310 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit D3H41_04310 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit D3H41_04315 IPR036188 FAD/NAD(P)-binding domain superfamily D3H41_04315 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily D3H41_04315 IPR011281 Succinate dehydrogenase, flavoprotein subunit D3H41_04315 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily D3H41_04315 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal D3H41_04315 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain D3H41_04315 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit D3H41_04315 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site D3H41_04320 IPR036010 2Fe-2S ferredoxin-like superfamily D3H41_04320 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal D3H41_04320 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site D3H41_04320 IPR012675 Beta-grasp domain superfamily D3H41_04320 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain D3H41_04320 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein D3H41_04320 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain D3H41_04320 IPR009051 Alpha-helical ferredoxin D3H41_04325 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily D3H41_04325 IPR001017 Dehydrogenase, E1 component D3H41_04325 IPR005475 Transketolase-like, pyrimidine-binding domain D3H41_04325 IPR029061 Thiamin diphosphate-binding fold D3H41_04325 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal D3H41_04325 IPR011603 2-oxoglutarate dehydrogenase E1 component D3H41_04325 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain D3H41_04330 IPR036625 E3-binding domain superfamily D3H41_04330 IPR004167 Peripheral subunit-binding domain D3H41_04330 IPR011053 Single hybrid motif D3H41_04330 IPR006255 Dihydrolipoamide succinyltransferase D3H41_04330 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily D3H41_04330 IPR000089 Biotin/lipoyl attachment D3H41_04330 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain D3H41_04330 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site D3H41_04335 IPR011761 ATP-grasp fold D3H41_04335 IPR016102 Succinyl-CoA synthetase-like D3H41_04335 IPR005809 Succinate--CoA synthetase, beta subunit D3H41_04335 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type D3H41_04335 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site D3H41_04335 IPR005811 ATP-citrate lyase/succinyl-CoA ligase D3H41_04335 IPR013815 ATP-grasp fold, subdomain 1 D3H41_04340 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site D3H41_04340 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site D3H41_04340 IPR005810 Succinyl-CoA ligase, alpha subunit D3H41_04340 IPR016102 Succinyl-CoA synthetase-like D3H41_04340 IPR036291 NAD(P)-binding domain superfamily D3H41_04340 IPR003781 CoA-binding D3H41_04340 IPR005811 ATP-citrate lyase/succinyl-CoA ligase D3H41_04345 IPR037294 ABC transporter, BtuC-like D3H41_04345 IPR001626 ABC transporter, TroCD-like D3H41_04350 IPR003593 AAA+ ATPase domain D3H41_04350 IPR003439 ABC transporter-like D3H41_04350 IPR017882 Zinc import ATP-binding protein ZnuC D3H41_04350 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_04355 IPR006127 Periplasmic solute binding protein, ZnuA-like D3H41_04355 IPR035520 High-affinity zinc uptake system protein ZnuA D3H41_04355 IPR006128 Adhesion lipoprotein D3H41_04360 IPR003313 AraC-type arabinose-binding/dimerisation domain D3H41_04360 IPR023609 Transcription regulator HTH, RhaS D3H41_04360 IPR009057 Homeobox-like domain superfamily D3H41_04360 IPR014710 RmlC-like jelly roll fold D3H41_04360 IPR011051 RmlC-like cupin domain superfamily D3H41_04360 IPR018060 DNA binding HTH domain, AraC-type D3H41_04360 IPR020449 Transcription regulator HTH, AraC- type D3H41_04365 IPR007167 Ferrous iron transporter FeoA domain D3H41_04365 IPR038157 Ferrous iron transporter, core domain D3H41_04365 IPR008988 Transcriptional repressor, C-terminal D3H41_04370 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain D3H41_04370 IPR005225 Small GTP-binding protein domain D3H41_04370 IPR011640 Ferrous iron transport protein B, C-terminal D3H41_04370 IPR041069 FeoB, cytosolic helical domain D3H41_04370 IPR030389 FeoB-type guanine nucleotide-binding (G) domain D3H41_04370 IPR003373 Ferrous iron transport protein B D3H41_04370 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_04390 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3H41_04390 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily D3H41_04390 IPR035684 Arginyl-tRNA synthetase, catalytic core domain D3H41_04390 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site D3H41_04390 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding D3H41_04390 IPR001278 Arginine-tRNA ligase D3H41_04390 IPR005148 Arginyl tRNA synthetase N-terminal domain D3H41_04390 IPR008909 DALR anticodon binding D3H41_04400 IPR010393 Protein of unknown function DUF991 D3H41_04400 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D3H41_04410 IPR018114 Serine proteases, trypsin family, histidine active site D3H41_04410 IPR001314 Peptidase S1A, chymotrypsin family D3H41_04410 IPR009003 Peptidase S1, PA clan D3H41_04410 IPR001254 Serine proteases, trypsin domain D3H41_04410 IPR033116 Serine proteases, trypsin family, serine active site D3H41_04415 IPR002912 ACT domain D3H41_04415 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain D3H41_04415 IPR002376 Formyl transferase, N-terminal D3H41_04415 IPR036477 Formyl transferase, N-terminal domain superfamily D3H41_04415 IPR004810 Formyltetrahydrofolate deformylase D3H41_04420 IPR014001 Helicase superfamily 1/2, ATP-binding domain D3H41_04420 IPR006935 Helicase/UvrB, N-terminal D3H41_04420 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_04420 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type D3H41_04420 IPR006555 ATP-dependent helicase, C-terminal D3H41_04425 IPR000905 Gcp-like domain D3H41_04425 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB D3H41_04435 IPR004658 Outer membrane lipoprotein Slp D3H41_04440 IPR000073 Alpha/beta hydrolase fold-1 D3H41_04440 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase D3H41_04440 IPR029058 Alpha/Beta hydrolase fold D3H41_04445 IPR020845 AMP-binding, conserved site D3H41_04445 IPR000873 AMP-dependent synthetase/ligase D3H41_04445 IPR042099 AMP-dependent synthetase-like superfamily D3H41_04445 IPR025110 AMP-binding enzyme, C-terminal domain D3H41_04450 IPR036397 Ribonuclease H superfamily D3H41_04450 IPR012337 Ribonuclease H-like superfamily D3H41_04450 IPR006292 Ribonuclease D D3H41_04450 IPR002121 HRDC domain D3H41_04450 IPR010997 HRDC-like superfamily D3H41_04450 IPR002562 3'-5' exonuclease domain D3H41_04455 IPR005527 Cell division topological specificity factor MinE D3H41_04455 IPR036707 Cell division topological specificity factor MinE superfamily D3H41_04460 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain D3H41_04460 IPR010223 ATP binding protein MinD, bacterial-type D3H41_04460 IPR025501 ATP binding protein MinD D3H41_04460 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_04465 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily D3H41_04465 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily D3H41_04465 IPR005526 Septum formation inhibitor MinC, C-terminal D3H41_04465 IPR013033 Septum formation inhibitor MinC D3H41_04465 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal D3H41_04465 IPR007874 Septum formation inhibitor MinC, N-terminal D3H41_04470 IPR038068 YcgL-like superfamily D3H41_04470 IPR027354 YcgL domain D3H41_04475 IPR031304 Transglycosylase SLT domain 2 D3H41_04475 IPR023346 Lysozyme-like domain superfamily D3H41_04475 IPR011757 Lytic transglycosylase MltB D3H41_04480 IPR005119 LysR, substrate-binding D3H41_04480 IPR036390 Winged helix DNA-binding domain superfamily D3H41_04480 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_04480 IPR000847 Transcription regulator HTH, LysR D3H41_04485 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain D3H41_04485 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial D3H41_04485 IPR008276 Concentrative nucleoside transporter D3H41_04485 IPR002668 Concentrative nucleoside transporter N-terminal domain D3H41_04485 IPR011657 Concentrative nucleoside transporter C-terminal domain D3H41_04490 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain D3H41_04490 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site D3H41_04490 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase D3H41_04490 IPR036291 NAD(P)-binding domain superfamily D3H41_04490 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain D3H41_04500 IPR016039 Thiolase-like D3H41_04500 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain D3H41_04500 IPR014030 Beta-ketoacyl synthase, N-terminal D3H41_04500 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 D3H41_04500 IPR000794 Beta-ketoacyl synthase D3H41_04500 IPR014031 Beta-ketoacyl synthase, C-terminal D3H41_04500 IPR018201 Beta-ketoacyl synthase, active site D3H41_04505 IPR002347 Short-chain dehydrogenase/reductase SDR D3H41_04505 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative D3H41_04505 IPR036291 NAD(P)-binding domain superfamily D3H41_04510 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ D3H41_04510 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ D3H41_04510 IPR029069 HotDog domain superfamily D3H41_04515 IPR014030 Beta-ketoacyl synthase, N-terminal D3H41_04515 IPR014031 Beta-ketoacyl synthase, C-terminal D3H41_04515 IPR000794 Beta-ketoacyl synthase D3H41_04515 IPR016039 Thiolase-like D3H41_04515 IPR018201 Beta-ketoacyl synthase, active site D3H41_04515 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain D3H41_04515 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 D3H41_04540 IPR022313 Phenylalanine/histidine ammonia-lyases, active site D3H41_04540 IPR008948 L-Aspartase-like D3H41_04540 IPR005921 Histidine ammonia-lyase D3H41_04540 IPR024083 Fumarase/histidase, N-terminal D3H41_04540 IPR001106 Aromatic amino acid lyase D3H41_04545 IPR029044 Nucleotide-diphospho-sugar transferases D3H41_04545 IPR001173 Glycosyltransferase 2-like D3H41_04545 IPR039528 DPM1-like D3H41_04550 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ D3H41_04550 IPR029069 HotDog domain superfamily D3H41_04550 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ D3H41_04565 IPR036736 ACP-like superfamily D3H41_04565 IPR009081 Phosphopantetheine binding ACP domain D3H41_04565 IPR003231 Acyl carrier protein (ACP) D3H41_04570 IPR036736 ACP-like superfamily D3H41_04570 IPR003231 Acyl carrier protein (ACP) D3H41_04570 IPR006162 Phosphopantetheine attachment site D3H41_04570 IPR009081 Phosphopantetheine binding ACP domain D3H41_04595 IPR036188 FAD/NAD(P)-binding domain superfamily D3H41_04595 IPR006905 Flavin-dependent halogenase D3H41_04605 IPR014014 RNA helicase, DEAD-box type, Q motif D3H41_04605 IPR011545 DEAD/DEAH box helicase domain D3H41_04605 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site D3H41_04605 IPR001650 Helicase, C-terminal D3H41_04605 IPR014001 Helicase superfamily 1/2, ATP-binding domain D3H41_04605 IPR028622 ATP-dependent RNA helicase RhlE D3H41_04605 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_04610 IPR006037 Regulator of K+ conductance, C-terminal D3H41_04610 IPR003148 Regulator of K+ conductance, N-terminal D3H41_04610 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily D3H41_04610 IPR036291 NAD(P)-binding domain superfamily D3H41_04615 IPR003445 Cation transporter D3H41_04615 IPR004772 TrkH potassium transport family D3H41_04630 IPR003846 Protein adenylyltransferase SelO D3H41_04635 IPR018389 TRAP transporter solute receptor DctP/TeaA D3H41_04635 IPR038404 TRAP transporter solute receptor DctP superfamily D3H41_04635 IPR004682 TRAP transporter solute receptor, DctP family D3H41_04640 IPR007387 TRAP transporter, small membrane protein DctQ D3H41_04645 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit D3H41_04645 IPR004681 TRAP transporter large membrane protein DctM D3H41_04655 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_04655 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 D3H41_04655 IPR025944 Sigma-54 interaction domain, conserved site D3H41_04655 IPR001789 Signal transduction response regulator, receiver domain D3H41_04655 IPR002197 DNA binding HTH domain, Fis-type D3H41_04655 IPR002078 RNA polymerase sigma factor 54 interaction domain D3H41_04655 IPR009057 Homeobox-like domain superfamily D3H41_04655 IPR011006 CheY-like superfamily D3H41_04655 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 D3H41_04655 IPR003593 AAA+ ATPase domain D3H41_04660 IPR033479 Double Cache domain 1 D3H41_04660 IPR029151 Periplasmic sensor-like domain superfamily D3H41_04660 IPR004358 Signal transduction histidine kinase-related protein, C-terminal D3H41_04660 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) D3H41_04660 IPR005467 Histidine kinase domain D3H41_04660 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain D3H41_04660 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily D3H41_04660 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3H41_04660 IPR003594 Histidine kinase/HSP90-like ATPase D3H41_04670 IPR008881 Trigger factor, ribosome-binding, bacterial D3H41_04670 IPR008880 Trigger factor, C-terminal D3H41_04670 IPR005215 Trigger factor D3H41_04670 IPR036611 Trigger factor ribosome-binding domain superfamily D3H41_04670 IPR027304 Trigger factor/SurA domain superfamily D3H41_04670 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain D3H41_04670 IPR037041 Trigger factor, C-terminal domain superfamily D3H41_04675 IPR029045 ClpP/crotonase-like domain superfamily D3H41_04675 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA D3H41_04675 IPR001907 ATP-dependent Clp protease proteolytic subunit D3H41_04675 IPR018215 ClpP, Ser active site D3H41_04675 IPR033135 ClpP, histidine active site D3H41_04680 IPR003593 AAA+ ATPase domain D3H41_04680 IPR004487 Clp protease, ATP-binding subunit ClpX D3H41_04680 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_04680 IPR010603 Zinc finger, ClpX C4-type D3H41_04680 IPR038366 Zinc finger, ClpX C4-type superfamily D3H41_04680 IPR019489 Clp ATPase, C-terminal D3H41_04680 IPR003959 ATPase, AAA-type, core D3H41_04685 IPR027065 Lon protease D3H41_04685 IPR015947 PUA-like superfamily D3H41_04685 IPR020568 Ribosomal protein S5 domain 2-type fold D3H41_04685 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D3H41_04685 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_04685 IPR008269 Peptidase S16, Lon proteolytic domain D3H41_04685 IPR003959 ATPase, AAA-type, core D3H41_04685 IPR027543 Lon protease, bacterial D3H41_04685 IPR003111 Lon, substrate-binding domain D3H41_04685 IPR003593 AAA+ ATPase domain D3H41_04685 IPR004815 Lon protease, bacterial/eukaryotic-type D3H41_04690 IPR000119 Histone-like DNA-binding protein D3H41_04690 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily D3H41_04690 IPR020816 Histone-like DNA-binding protein, conserved site D3H41_04695 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site D3H41_04695 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type D3H41_04695 IPR027304 Trigger factor/SurA domain superfamily D3H41_04700 IPR010994 RuvA domain 2-like D3H41_04700 IPR004509 Competence protein ComEA, helix-hairpin-helix domain D3H41_04715 IPR006674 HD domain D3H41_04715 IPR026875 Phosphohydrolase-associated domain D3H41_04715 IPR006261 dNTP triphosphohydrolase D3H41_04715 IPR003607 HD/PDEase domain D3H41_04715 IPR023023 dNTP triphosphohydrolase, type 2 D3H41_04720 IPR003607 HD/PDEase domain D3H41_04720 IPR022971 5'-deoxynucleotidase YfbR D3H41_04720 IPR039356 Metal-dependent nucleoside 5'-monophosphatase D3H41_04725 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 D3H41_04725 IPR015421 Pyridoxal phosphate-dependent transferase, major domain D3H41_04725 IPR015424 Pyridoxal phosphate-dependent transferase D3H41_04725 IPR004839 Aminotransferase, class I/classII D3H41_04730 IPR005801 ADC synthase D3H41_04730 IPR004561 Isochorismate synthase D3H41_04730 IPR015890 Chorismate-utilising enzyme, C-terminal D3H41_04730 IPR034681 Isochorismate synthase MenF D3H41_04735 IPR032264 Menaquinone biosynthesis protein MenD, middle domain D3H41_04735 IPR029061 Thiamin diphosphate-binding fold D3H41_04735 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase D3H41_04735 IPR029035 DHS-like NAD/FAD-binding domain superfamily D3H41_04735 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain D3H41_04735 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding D3H41_04740 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase D3H41_04740 IPR029058 Alpha/Beta hydrolase fold D3H41_04740 IPR000073 Alpha/beta hydrolase fold-1 D3H41_04745 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB D3H41_04745 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site D3H41_04745 IPR029045 ClpP/crotonase-like domain superfamily D3H41_04745 IPR014748 Enoyl-CoA hydratase, C-terminal D3H41_04745 IPR001753 Enoyl-CoA hydratase/isomerase D3H41_04750 IPR029017 Enolase-like, N-terminal D3H41_04750 IPR029065 Enolase C-terminal domain-like D3H41_04750 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal D3H41_04750 IPR010196 o-Succinylbenzoate synthase, MenC type1 D3H41_04750 IPR036849 Enolase-like, C-terminal domain superfamily D3H41_04755 IPR000873 AMP-dependent synthetase/ligase D3H41_04755 IPR020845 AMP-binding, conserved site D3H41_04755 IPR025110 AMP-binding enzyme, C-terminal domain D3H41_04755 IPR042099 AMP-dependent synthetase-like superfamily D3H41_04755 IPR010192 2-succinylbenzoate--CoA ligase D3H41_04765 IPR018383 Uncharacterised protein family UPF0324, prokaryote D3H41_04770 IPR011701 Major facilitator superfamily D3H41_04770 IPR036259 MFS transporter superfamily D3H41_04770 IPR023727 Lysophospholipid transporter LplT D3H41_04815 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain D3H41_04815 IPR006143 RND efflux pump, membrane fusion protein D3H41_04820 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D3H41_04820 IPR001036 Acriflavin resistance protein D3H41_04840 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site D3H41_04840 IPR001926 Pyridoxal-phosphate dependent enzyme D3H41_04840 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme D3H41_04840 IPR005858 Cysteine synthase CysM D3H41_04840 IPR005856 Cysteine synthase D3H41_04845 IPR019888 Transcription regulator AsnC-type D3H41_04845 IPR000485 AsnC-type HTH domain D3H41_04845 IPR011991 ArsR-like helix-turn-helix domain D3H41_04845 IPR019885 Transcription regulator HTH, AsnC-type, conserved site D3H41_04845 IPR036390 Winged helix DNA-binding domain superfamily D3H41_04845 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_04845 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain D3H41_04845 IPR011008 Dimeric alpha-beta barrel D3H41_04855 IPR029069 HotDog domain superfamily D3H41_04855 IPR003703 Acyl-CoA thioesterase D3H41_04860 IPR039366 YscW/ExsB D3H41_04865 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_04865 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding D3H41_04865 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain D3H41_04875 IPR000700 PAS-associated, C-terminal D3H41_04875 IPR035965 PAS domain superfamily D3H41_04875 IPR000160 GGDEF domain D3H41_04875 IPR013656 PAS fold-4 D3H41_04875 IPR000014 PAS domain D3H41_04875 IPR029787 Nucleotide cyclase D3H41_04885 IPR029064 50S ribosomal protein L30e-like D3H41_04885 IPR001537 tRNA/rRNA methyltransferase, SpoU type D3H41_04885 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal D3H41_04885 IPR029028 Alpha/beta knot methyltransferases D3H41_04885 IPR013123 RNA 2-O ribose methyltransferase, substrate binding D3H41_04890 IPR013785 Aldolase-type TIM barrel D3H41_04890 IPR000644 CBS domain D3H41_04890 IPR005990 Inosine-5'-monophosphate dehydrogenase D3H41_04890 IPR015875 IMP dehydrogenase / GMP reductase, conserved site D3H41_04890 IPR001093 IMP dehydrogenase/GMP reductase D3H41_04895 IPR018303 P-type ATPase, phosphorylation site D3H41_04895 IPR023299 P-type ATPase, cytoplasmic domain N D3H41_04895 IPR023298 P-type ATPase, transmembrane domain superfamily D3H41_04895 IPR036412 HAD-like superfamily D3H41_04895 IPR001757 P-type ATPase D3H41_04895 IPR023214 HAD superfamily D3H41_04895 IPR036163 Heavy metal-associated domain superfamily D3H41_04895 IPR017969 Heavy-metal-associated, conserved site D3H41_04895 IPR006121 Heavy metal-associated domain, HMA D3H41_04895 IPR008250 P-type ATPase, A domain superfamily D3H41_04895 IPR027256 P-type ATPase, subfamily IB D3H41_04900 IPR035994 Nucleoside phosphorylase superfamily D3H41_04900 IPR010058 Uridine phosphorylase D3H41_04900 IPR000845 Nucleoside phosphorylase domain D3H41_04900 IPR018016 Nucleoside phosphorylase, conserved site D3H41_04910 IPR003660 HAMP domain D3H41_04910 IPR004090 Chemotaxis methyl-accepting receptor D3H41_04910 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain D3H41_04915 IPR011146 HIT-like domain D3H41_04915 IPR036265 HIT-like superfamily D3H41_04915 IPR001310 Histidine triad (HIT) protein D3H41_04915 IPR019808 Histidine triad, conserved site D3H41_04930 IPR014094 Penicillin-binding protein activator LpoB D3H41_04930 IPR012640 Membrane lipoprotein, lipid attachment site D3H41_04935 IPR014093 Thiamine kinase D3H41_04935 IPR011009 Protein kinase-like domain superfamily D3H41_04935 IPR002575 Aminoglycoside phosphotransferase D3H41_04940 IPR022987 Uncharacterised protein family UPF0227 D3H41_04940 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA D3H41_04940 IPR029058 Alpha/Beta hydrolase fold D3H41_04945 IPR023753 FAD/NAD(P)-binding domain D3H41_04945 IPR036188 FAD/NAD(P)-binding domain superfamily D3H41_04960 IPR037235 TRCF-like, C-terminal domain D3H41_04960 IPR036101 CarD-like/TRCF domain superfamily D3H41_04960 IPR001650 Helicase, C-terminal D3H41_04960 IPR011545 DEAD/DEAH box helicase domain D3H41_04960 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_04960 IPR014001 Helicase superfamily 1/2, ATP-binding domain D3H41_04960 IPR005118 Transcription-repair-coupling factor, C-terminal domain D3H41_04960 IPR041471 UvrB, interaction domain D3H41_04960 IPR003711 CarD-like/TRCF domain D3H41_04960 IPR004576 Transcription-repair coupling factor D3H41_04970 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E D3H41_04970 IPR003838 ABC transporter permease protein domain D3H41_04970 IPR025857 MacB-like periplasmic core domain D3H41_04975 IPR003439 ABC transporter-like D3H41_04975 IPR003593 AAA+ ATPase domain D3H41_04975 IPR015854 ABC transporter, lipoprotein release, LolD D3H41_04975 IPR017871 ABC transporter, conserved site D3H41_04975 IPR011924 Lipoprotein releasing system, ATP-binding protein D3H41_04975 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_04980 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E D3H41_04980 IPR003838 ABC transporter permease protein domain D3H41_04980 IPR011926 Lipoprotein-releasing system transmembrane protein LolE, gammaproteobacteria type D3H41_04980 IPR025857 MacB-like periplasmic core domain D3H41_04990 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like D3H41_04990 IPR025405 Domain of unknown function DUF4131 D3H41_04990 IPR004797 Competence protein ComEC/Rec2 D3H41_04990 IPR004477 ComEC/Rec2-related protein D3H41_04990 IPR001279 Metallo-beta-lactamase D3H41_04990 IPR035681 ComA-like, MBL domain D3H41_05000 IPR003439 ABC transporter-like D3H41_05000 IPR011917 ABC transporter, lipid A export, MsbA D3H41_05000 IPR017871 ABC transporter, conserved site D3H41_05000 IPR039421 Type I protein exporter D3H41_05000 IPR003593 AAA+ ATPase domain D3H41_05000 IPR036640 ABC transporter type 1, transmembrane domain superfamily D3H41_05000 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_05000 IPR011527 ABC transporter type 1, transmembrane domain D3H41_05005 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_05005 IPR003758 Tetraacyldisaccharide 4'-kinase D3H41_05010 IPR005651 Trm112-like D3H41_05015 IPR029044 Nucleotide-diphospho-sugar transferases D3H41_05015 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase D3H41_05015 IPR003329 Acylneuraminate cytidylyltransferase D3H41_05020 IPR007390 Sporulation stage V, protein R D3H41_05025 IPR006698 Uncharacterised protein family UPF0229 D3H41_05030 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_05030 IPR010650 PrkA C-terminal domain D3H41_05030 IPR013153 PrkA AAA domain D3H41_05030 IPR016230 Serine-protein kinase, PrkA D3H41_05040 IPR023145 YfbU, helix-hairpin domain superfamily D3H41_05040 IPR023146 YfbU, alpha-helical bundle domain superfamily D3H41_05040 IPR005587 Uncharacterised protein family UPF0304, YfbU D3H41_05050 IPR013785 Aldolase-type TIM barrel D3H41_05050 IPR034457 Organic radical-activating enzymes D3H41_05050 IPR012839 Organic radical enzyme activase D3H41_05050 IPR012838 Pyruvate formate-lyase 1 activating enzyme D3H41_05050 IPR034465 Pyruvate formate-lyase activase D3H41_05050 IPR001989 Radical-activating enzyme, conserved site D3H41_05050 IPR007197 Radical SAM D3H41_05060 IPR004184 Pyruvate formate lyase domain D3H41_05060 IPR001150 Glycine radical domain D3H41_05060 IPR019777 Formate C-acetyltransferase glycine radical, conserved site D3H41_05060 IPR005949 Formate acetyltransferase D3H41_05080 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_05080 IPR017871 ABC transporter, conserved site D3H41_05080 IPR003439 ABC transporter-like D3H41_05080 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type D3H41_05080 IPR003593 AAA+ ATPase domain D3H41_05085 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter D3H41_05085 IPR018313 Solute-binding protein family 3, conserved site D3H41_05085 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF D3H41_05090 IPR030199 Histidine transport system permease protein HisQ D3H41_05090 IPR000515 ABC transporter type 1, transmembrane domain MetI-like D3H41_05090 IPR035906 MetI-like superfamily D3H41_05090 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain D3H41_05095 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain D3H41_05095 IPR000515 ABC transporter type 1, transmembrane domain MetI-like D3H41_05095 IPR035906 MetI-like superfamily D3H41_05105 IPR005135 Endonuclease/exonuclease/phosphatase D3H41_05105 IPR037493 Exodeoxyribonuclease III-like D3H41_05105 IPR036691 Endonuclease/exonuclease/phosphatase superfamily D3H41_05105 IPR020848 AP endonuclease 1, conserved site D3H41_05105 IPR004808 AP endonuclease 1 D3H41_05105 IPR020847 AP endonuclease 1, binding site D3H41_05110 IPR019630 Protein of unknown function DUF2496, YbaM-related D3H41_05115 IPR038338 PriB/PriC superfamily D3H41_05115 IPR010890 Primosomal replication PriB/PriC D3H41_05120 IPR002781 Transmembrane protein TauE-like D3H41_05125 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type D3H41_05125 IPR006555 ATP-dependent helicase, C-terminal D3H41_05125 IPR039000 ATP-dependent DNA helicase DinG D3H41_05125 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_05125 IPR001650 Helicase, C-terminal D3H41_05125 IPR010614 DEAD2 D3H41_05135 IPR018635 Uncharacterised protein family UPF0319 D3H41_05140 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site D3H41_05140 IPR006145 Pseudouridine synthase, RsuA/RluA D3H41_05140 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain D3H41_05140 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F D3H41_05140 IPR020103 Pseudouridine synthase, catalytic domain superfamily D3H41_05145 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric D3H41_05150 IPR011129 Cold shock domain D3H41_05150 IPR012156 Cold shock, CspA D3H41_05150 IPR012340 Nucleic acid-binding, OB-fold D3H41_05150 IPR012751 CspD, cold shock D3H41_05150 IPR019844 Cold-shock (CSD) domain D3H41_05150 IPR002059 Cold-shock protein, DNA-binding D3H41_05155 IPR003769 Adaptor protein ClpS, core D3H41_05155 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like D3H41_05155 IPR022935 ATP-dependent Clp protease adaptor protein ClpS D3H41_05160 IPR018368 ClpA/B, conserved site 1 D3H41_05160 IPR001270 ClpA/B family D3H41_05160 IPR028299 ClpA/B, conserved site 2 D3H41_05160 IPR041546 ClpA/ClpB, AAA lid domain D3H41_05160 IPR003959 ATPase, AAA-type, core D3H41_05160 IPR019489 Clp ATPase, C-terminal D3H41_05160 IPR004176 Clp, N-terminal D3H41_05160 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_05160 IPR036628 Clp, N-terminal domain superfamily D3H41_05160 IPR003593 AAA+ ATPase domain D3H41_05160 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA D3H41_05165 IPR012340 Nucleic acid-binding, OB-fold D3H41_05165 IPR004368 Translation initiation factor IF-1 D3H41_05165 IPR022967 RNA-binding domain, S1 D3H41_05165 IPR006196 RNA-binding domain, S1, IF1 type D3H41_05170 IPR016181 Acyl-CoA N-acyltransferase D3H41_05170 IPR017138 Aspartate/glutamate leucyltransferase D3H41_05170 IPR030700 N-end rule aminoacyl transferase D3H41_05170 IPR007472 N-end rule aminoacyl transferase, C-terminal D3H41_05170 IPR007471 N-end aminoacyl transferase, N-terminal D3H41_05175 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase D3H41_05175 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal D3H41_05175 IPR016181 Acyl-CoA N-acyltransferase D3H41_05185 IPR036968 Enolpyruvate transferase domain superfamily D3H41_05185 IPR001986 Enolpyruvate transferase domain D3H41_05185 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta D3H41_05185 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site D3H41_05185 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase D3H41_05190 IPR019633 Protein of unknown function DUF2498 D3H41_05190 IPR038191 YciN superfamily D3H41_05195 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 D3H41_05195 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 D3H41_05195 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 D3H41_05195 IPR023405 DNA topoisomerase, type IA, core domain D3H41_05195 IPR003602 DNA topoisomerase, type IA, DNA-binding domain D3H41_05195 IPR013498 DNA topoisomerase, type IA, zn finger D3H41_05195 IPR005733 DNA topoisomerase I, bacterial-type D3H41_05195 IPR028612 DNA topoisomerase I, type IA D3H41_05195 IPR013497 DNA topoisomerase, type IA, central D3H41_05195 IPR006171 TOPRIM domain D3H41_05195 IPR000380 DNA topoisomerase, type IA D3H41_05195 IPR034149 DNA topoisomerase 1, TOPRIM domain D3H41_05195 IPR023406 DNA topoisomerase, type IA, active site D3H41_05195 IPR003601 DNA topoisomerase, type IA, domain 2 D3H41_05195 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type D3H41_05200 IPR005835 Nucleotidyl transferase domain D3H41_05200 IPR011831 Glucose-1-phosphate adenylyltransferase D3H41_05200 IPR005836 ADP-glucose pyrophosphorylase, conserved site D3H41_05200 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial D3H41_05200 IPR011004 Trimeric LpxA-like superfamily D3H41_05200 IPR029044 Nucleotide-diphospho-sugar transferases D3H41_05205 IPR013534 Starch synthase, catalytic domain D3H41_05205 IPR001296 Glycosyl transferase, family 1 D3H41_05205 IPR011835 Bacterial/plant glycogen synthase D3H41_05225 IPR026256 Transcriptional regulator, TfoX/Sxy-type D3H41_05225 IPR007076 TfoX, N-terminal D3H41_05225 IPR007077 TfoX, C-terminal D3H41_05230 IPR000843 LacI-type HTH domain D3H41_05230 IPR010982 Lambda repressor-like, DNA-binding domain superfamily D3H41_05230 IPR028082 Periplasmic binding protein-like I D3H41_05230 IPR023588 Transcription regulator HTH, PurR D3H41_05235 IPR036411 TorD-like superfamily D3H41_05235 IPR023069 Chaperone TorD D3H41_05235 IPR036386 HscB, C-terminal domain superfamily D3H41_05235 IPR020945 DMSO/Nitrate reductase chaperone D3H41_05240 IPR001867 OmpR/PhoB-type DNA-binding domain D3H41_05240 IPR001789 Signal transduction response regulator, receiver domain D3H41_05240 IPR011006 CheY-like superfamily D3H41_05240 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_05240 IPR039420 Transcriptional regulatory protein WalR-like D3H41_05245 IPR003848 Domain of unknown function DUF218 D3H41_05250 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3H41_05250 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase D3H41_05255 IPR033439 Chromosome partition protein MukF, winged-helix domain D3H41_05255 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_05255 IPR036141 MukF, middle domain superfamily D3H41_05255 IPR036390 Winged helix DNA-binding domain superfamily D3H41_05255 IPR038198 MukF, C-terminal domain superfamily D3H41_05255 IPR005582 Chromosome partition protein MukF D3H41_05255 IPR033440 Chromosome partition protein MukF, middle domain D3H41_05255 IPR033441 Chromosome partition protein MukF, C-terminal domain D3H41_05260 IPR042038 MukE, N-terminal domain D3H41_05260 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE D3H41_05260 IPR042037 MukE, C-terminal domain D3H41_05265 IPR007406 MukB, N-terminal domain D3H41_05265 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_05265 IPR012090 Chromosome partition protein MukB D3H41_05265 IPR032520 MukB, hinge domain D3H41_05285 IPR013651 ATP-grasp fold, RimK-type D3H41_05285 IPR013815 ATP-grasp fold, subdomain 1 D3H41_05285 IPR021109 Aspartic peptidase domain superfamily D3H41_05285 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX D3H41_05285 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK D3H41_05285 IPR011761 ATP-grasp fold D3H41_05285 IPR041107 RimK, PreATP-grasp domain D3H41_05295 IPR027555 tRNA (mo5U34)-methyltransferase-like D3H41_05295 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3H41_05295 IPR010017 tRNA U34 carboxymethyltransferase D3H41_05300 IPR005271 Carboxy-S-adenosyl-L-methionine synthase D3H41_05300 IPR041698 Methyltransferase domain 25 D3H41_05300 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3H41_05305 IPR036520 UPF0759 superfamily D3H41_05305 IPR002763 Protein of unknown function DUF72 D3H41_05310 IPR006195 Aminoacyl-tRNA synthetase, class II D3H41_05310 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) D3H41_05310 IPR004524 Aspartate-tRNA ligase, type 1 D3H41_05310 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb D3H41_05310 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type D3H41_05310 IPR004115 GAD-like domain superfamily D3H41_05310 IPR029351 GAD domain D3H41_05310 IPR012340 Nucleic acid-binding, OB-fold D3H41_05315 IPR029072 YebC-like D3H41_05315 IPR026564 Transcriptional regulator TACO1-like, domain 3 D3H41_05315 IPR002876 Transcriptional regulator TACO1-like D3H41_05315 IPR017856 Integrase-like, N-terminal D3H41_05320 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site D3H41_05320 IPR036397 Ribonuclease H superfamily D3H41_05320 IPR002176 Crossover junction endodeoxyribonuclease RuvC D3H41_05320 IPR012337 Ribonuclease H-like superfamily D3H41_05325 IPR011114 Holliday junction DNA helicase RuvA, C-terminal D3H41_05325 IPR036267 RuvA, C-terminal domain superfamily D3H41_05325 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 D3H41_05325 IPR000085 Bacterial DNA recombination protein RuvA D3H41_05325 IPR012340 Nucleic acid-binding, OB-fold D3H41_05325 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial D3H41_05325 IPR010994 RuvA domain 2-like D3H41_05330 IPR008824 RuvB-like P-loop domain D3H41_05330 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_05330 IPR036390 Winged helix DNA-binding domain superfamily D3H41_05330 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_05330 IPR004605 DNA helicase, Holliday junction RuvB-type D3H41_05330 IPR041445 RuvB, AAA lid domain D3H41_05330 IPR003593 AAA+ ATPase domain D3H41_05330 IPR008823 RuvB C-terminal winged helix domain D3H41_05335 IPR002585 Cytochrome ubiquinol oxidase subunit 1 D3H41_05340 IPR003317 Cytochrome ubiquinol oxidase subunit 2 D3H41_05345 IPR011724 Cyd operon protein YbgT D3H41_05345 IPR012994 Membrane bound YbgT-like D3H41_05355 IPR006683 Thioesterase domain D3H41_05355 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase D3H41_05355 IPR029069 HotDog domain superfamily D3H41_05355 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family D3H41_05355 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site D3H41_05360 IPR014163 Tol-Pal system, TolQ D3H41_05360 IPR002898 MotA/TolQ/ExbB proton channel D3H41_05365 IPR003400 Biopolymer transport protein ExbD/TolR D3H41_05365 IPR014168 Tol-Pal system protein TolR D3H41_05375 IPR014167 Tol-Pal system protein TolB D3H41_05375 IPR007195 TolB, N-terminal D3H41_05375 IPR036752 TolB, N-terminal domain superfamily D3H41_05375 IPR011042 Six-bladed beta-propeller, TolB-like D3H41_05375 IPR011659 WD40-like Beta Propeller D3H41_05380 IPR039001 Peptidoglycan-associated lipoprotein D3H41_05380 IPR006690 Outer membrane protein, OmpA-like, conserved site D3H41_05380 IPR036737 OmpA-like domain superfamily D3H41_05380 IPR006665 OmpA-like domain D3H41_05380 IPR006664 Outer membrane protein, bacterial D3H41_05380 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal D3H41_05385 IPR032519 YbgF, trimerisation domain D3H41_05385 IPR034706 Cell division coordinator CpoB D3H41_05385 IPR013026 Tetratricopeptide repeat-containing domain D3H41_05385 IPR014162 Cell division coordinator CpoB, C-terminal D3H41_05385 IPR019734 Tetratricopeptide repeat D3H41_05385 IPR011990 Tetratricopeptide-like helical domain superfamily D3H41_05390 IPR023513 Quinolinate synthase A, type 1 D3H41_05390 IPR003473 Quinolinate synthetase A D3H41_05390 IPR036094 Quinolinate synthetase A superfamily D3H41_05400 IPR007140 Protein of unknown function DUF350 D3H41_05410 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain D3H41_05410 IPR016185 Pre-ATP-grasp domain superfamily D3H41_05420 IPR015387 LuxQ, periplasmic D3H41_05420 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain D3H41_05420 IPR005467 Histidine kinase domain D3H41_05420 IPR029151 Periplasmic sensor-like domain superfamily D3H41_05420 IPR004358 Signal transduction histidine kinase-related protein, C-terminal D3H41_05420 IPR001789 Signal transduction response regulator, receiver domain D3H41_05420 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3H41_05420 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily D3H41_05420 IPR003594 Histidine kinase/HSP90-like ATPase D3H41_05420 IPR011006 CheY-like superfamily D3H41_05425 IPR010574 L-alanine exporter AlaE D3H41_05450 IPR022892 Ribonuclease HI D3H41_05450 IPR036397 Ribonuclease H superfamily D3H41_05450 IPR002156 Ribonuclease H domain D3H41_05450 IPR012337 Ribonuclease H-like superfamily D3H41_05455 IPR009057 Homeobox-like domain superfamily D3H41_05455 IPR006118 Recombinase, conserved site D3H41_05455 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily D3H41_05455 IPR006120 Resolvase, HTH domain D3H41_05455 IPR006119 Resolvase, N-terminal catalytic domain D3H41_05465 IPR003317 Cytochrome ubiquinol oxidase subunit 2 D3H41_05470 IPR002585 Cytochrome ubiquinol oxidase subunit 1 D3H41_05485 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain D3H41_05485 IPR033480 Single Cache domain 2 D3H41_05485 IPR003660 HAMP domain D3H41_05485 IPR004090 Chemotaxis methyl-accepting receptor D3H41_05485 IPR000727 Target SNARE coiled-coil homology domain D3H41_05490 IPR006143 RND efflux pump, membrane fusion protein D3H41_05490 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain D3H41_05495 IPR001036 Acriflavin resistance protein D3H41_05495 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 D3H41_05495 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D3H41_05510 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3H41_05510 IPR002306 Tryptophan-tRNA ligase D3H41_05510 IPR024109 Tryptophan-tRNA ligase, bacterial-type D3H41_05510 IPR002305 Aminoacyl-tRNA synthetase, class Ic D3H41_05510 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site D3H41_05520 IPR005135 Endonuclease/exonuclease/phosphatase D3H41_05520 IPR036691 Endonuclease/exonuclease/phosphatase superfamily D3H41_05520 IPR017766 Sphingomyelinase C/phospholipase C D3H41_05530 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain D3H41_05530 IPR004090 Chemotaxis methyl-accepting receptor D3H41_05530 IPR003660 HAMP domain D3H41_05535 IPR012347 Ferritin-like D3H41_05535 IPR010386 tRNA-hydroxylase MiaE D3H41_05535 IPR009078 Ferritin-like superfamily D3H41_05545 IPR036390 Winged helix DNA-binding domain superfamily D3H41_05545 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_05545 IPR000847 Transcription regulator HTH, LysR D3H41_05545 IPR005119 LysR, substrate-binding D3H41_05555 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 D3H41_05555 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal D3H41_05555 IPR008141 Alanine dehydrogenase D3H41_05555 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain D3H41_05555 IPR036291 NAD(P)-binding domain superfamily D3H41_05560 IPR011991 ArsR-like helix-turn-helix domain D3H41_05560 IPR000485 AsnC-type HTH domain D3H41_05560 IPR019888 Transcription regulator AsnC-type D3H41_05560 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain D3H41_05560 IPR019885 Transcription regulator HTH, AsnC-type, conserved site D3H41_05560 IPR036390 Winged helix DNA-binding domain superfamily D3H41_05560 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_05560 IPR011008 Dimeric alpha-beta barrel D3H41_05565 IPR002543 FtsK domain D3H41_05565 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_05565 IPR018541 FtsK gamma domain D3H41_05565 IPR036390 Winged helix DNA-binding domain superfamily D3H41_05565 IPR041027 FtsK alpha domain D3H41_05565 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_05565 IPR025199 DNA translocase FtsK, 4TM region D3H41_05570 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria D3H41_05570 IPR004564 Outer membrane lipoprotein carrier protein LolA-like D3H41_05570 IPR029046 Lipoprotein localisation LolA/LolB/LppX D3H41_05575 IPR021886 MgsA AAA+ ATPase C-terminal D3H41_05575 IPR032423 AAA C-terminal domain D3H41_05575 IPR003959 ATPase, AAA-type, core D3H41_05575 IPR003593 AAA+ ATPase domain D3H41_05575 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal D3H41_05575 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_05580 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm D3H41_05580 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily D3H41_05580 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) D3H41_05580 IPR002317 Serine-tRNA ligase, type1 D3H41_05580 IPR006195 Aminoacyl-tRNA synthetase, class II D3H41_05580 IPR015866 Serine-tRNA synthetase, type1, N-terminal D3H41_05580 IPR033729 Serine-tRNA ligase catalytic core domain D3H41_05595 IPR000962 Zinc finger, DksA/TraR C4-type D3H41_05595 IPR020458 Zinc finger, DksA/TraR C4-type conserved site D3H41_05595 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria D3H41_05605 IPR013785 Aldolase-type TIM barrel D3H41_05605 IPR010722 Biotin and thiamin synthesis-associated domain D3H41_05605 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB D3H41_05605 IPR024177 Biotin synthase D3H41_05605 IPR007197 Radical SAM D3H41_05605 IPR006638 Elp3/MiaB/NifB D3H41_05610 IPR015424 Pyridoxal phosphate-dependent transferase D3H41_05610 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site D3H41_05610 IPR004839 Aminotransferase, class I/classII D3H41_05610 IPR015421 Pyridoxal phosphate-dependent transferase, major domain D3H41_05610 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 D3H41_05610 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria D3H41_05610 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type D3H41_05615 IPR013216 Methyltransferase type 11 D3H41_05615 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3H41_05615 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC D3H41_05620 IPR004472 Dethiobiotin synthase BioD D3H41_05620 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_05630 IPR022919 Peptidase M48, protease HtpX, putative D3H41_05630 IPR001915 Peptidase M48 D3H41_05640 IPR020904 Short-chain dehydrogenase/reductase, conserved site D3H41_05640 IPR036291 NAD(P)-binding domain superfamily D3H41_05640 IPR002347 Short-chain dehydrogenase/reductase SDR D3H41_05655 IPR003333 Mycolic acid cyclopropane synthase D3H41_05655 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3H41_05665 IPR016087 Chalcone isomerase D3H41_05675 IPR013539 Adenylosuccinate lyase PurB, C-terminal D3H41_05675 IPR004769 Adenylosuccinate lyase D3H41_05675 IPR008948 L-Aspartase-like D3H41_05675 IPR022761 Fumarate lyase, N-terminal D3H41_05675 IPR000362 Fumarate lyase family D3H41_05675 IPR020557 Fumarate lyase, conserved site D3H41_05675 IPR024083 Fumarase/histidase, N-terminal D3H41_05680 IPR007451 High frequency lysogenization protein HflD D3H41_05680 IPR035932 HflD-like superfamily D3H41_05685 IPR004506 tRNA-specific 2-thiouridylase D3H41_05685 IPR023382 Adenine nucleotide alpha hydrolase-like domains D3H41_05685 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3H41_05695 IPR011611 Carbohydrate kinase PfkB D3H41_05695 IPR029056 Ribokinase-like D3H41_05695 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site D3H41_05700 IPR027454 Histone-like protein H-NS, N-terminal D3H41_05700 IPR001801 Histone-like protein H-NS D3H41_05700 IPR027444 Histone-like protein H-NS, C-terminal domain D3H41_05700 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily D3H41_05705 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal D3H41_05710 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 D3H41_05710 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_05710 IPR001789 Signal transduction response regulator, receiver domain D3H41_05710 IPR002078 RNA polymerase sigma factor 54 interaction domain D3H41_05710 IPR025944 Sigma-54 interaction domain, conserved site D3H41_05710 IPR002197 DNA binding HTH domain, Fis-type D3H41_05710 IPR009057 Homeobox-like domain superfamily D3H41_05710 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 D3H41_05710 IPR003593 AAA+ ATPase domain D3H41_05710 IPR011006 CheY-like superfamily D3H41_05715 IPR013115 Histidine biosynthesis HisG, C-terminal D3H41_05715 IPR018198 ATP phosphoribosyltransferase, conserved site D3H41_05715 IPR011322 Nitrogen regulatory PII-like, alpha/beta D3H41_05715 IPR013820 ATP phosphoribosyltransferase, catalytic domain D3H41_05715 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal D3H41_05715 IPR020621 ATP phosphoribosyltransferase HisG, long form D3H41_05715 IPR001348 ATP phosphoribosyltransferase HisG D3H41_05720 IPR022695 Histidinol dehydrogenase, monofunctional D3H41_05720 IPR016161 Aldehyde/histidinol dehydrogenase D3H41_05720 IPR012131 Histidinol dehydrogenase D3H41_05720 IPR001692 Histidinol dehydrogenase, conserved site D3H41_05725 IPR015421 Pyridoxal phosphate-dependent transferase, major domain D3H41_05725 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 D3H41_05725 IPR015424 Pyridoxal phosphate-dependent transferase D3H41_05725 IPR005861 Histidinol-phosphate aminotransferase family D3H41_05725 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site D3H41_05725 IPR004839 Aminotransferase, class I/classII D3H41_05730 IPR020568 Ribosomal protein S5 domain 2-type fold D3H41_05730 IPR013954 Polynucleotide kinase 3 phosphatase D3H41_05730 IPR006549 HAD-superfamily hydrolase,subfamily IIIA D3H41_05730 IPR023214 HAD superfamily D3H41_05730 IPR020566 Histidine biosynthesis bifunctional protein HisB D3H41_05730 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily D3H41_05730 IPR000807 Imidazoleglycerol-phosphate dehydratase D3H41_05730 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site D3H41_05730 IPR005954 Histidinol-phosphatase D3H41_05730 IPR036412 HAD-like superfamily D3H41_05730 IPR006543 Histidinol-phosphate phosphatase D3H41_05735 IPR029062 Class I glutamine amidotransferase-like D3H41_05735 IPR010139 Imidazole glycerol phosphate synthase, subunit H D3H41_05735 IPR017926 Glutamine amidotransferase D3H41_05740 IPR011060 Ribulose-phosphate binding barrel D3H41_05740 IPR006062 Histidine biosynthesis D3H41_05740 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA D3H41_05740 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase D3H41_05740 IPR013785 Aldolase-type TIM barrel D3H41_05745 IPR006062 Histidine biosynthesis D3H41_05745 IPR013785 Aldolase-type TIM barrel D3H41_05745 IPR004651 Histidine biosynthesis, HisF D3H41_05745 IPR011060 Ribulose-phosphate binding barrel D3H41_05750 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase D3H41_05750 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like D3H41_05750 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily D3H41_05750 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain D3H41_05750 IPR023019 Histidine biosynthesis bifunctional protein HisIE D3H41_05755 IPR004027 SEC-C motif D3H41_05755 IPR023006 Uncharacterised protein family UPF0225 D3H41_05755 IPR032710 NTF2-like domain superfamily D3H41_05760 IPR013976 Metal-dependent hydrolase HDOD D3H41_05760 IPR001633 EAL domain D3H41_05760 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing D3H41_05760 IPR035919 EAL domain superfamily D3H41_05765 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type D3H41_05765 IPR029052 Metallo-dependent phosphatase-like D3H41_05765 IPR010138 UDP-2,3-diacylglucosamine hydrolase D3H41_05770 IPR029000 Cyclophilin-like domain superfamily D3H41_05770 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase D3H41_05770 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site D3H41_05770 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain D3H41_05775 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR D3H41_05775 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase D3H41_05775 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3H41_05775 IPR032678 tRNA synthetases class I, catalytic domain D3H41_05775 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding D3H41_05775 IPR015803 Cysteine-tRNA ligase D3H41_05780 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_05780 IPR001267 Thymidine kinase D3H41_05780 IPR020633 Thymidine kinase, conserved site D3H41_05785 IPR003848 Domain of unknown function DUF218 D3H41_05785 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3H41_05810 IPR023999 Formate transporter FocA, putative D3H41_05810 IPR023271 Aquaporin-like D3H41_05810 IPR000292 Formate/nitrite transporter D3H41_05810 IPR024002 Formate/nitrite transporter, conserved site D3H41_05820 IPR005226 UPF0014 family D3H41_05825 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE D3H41_05825 IPR004448 Nitrate reductas, NapE, periplasmic D3H41_05830 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT D3H41_05830 IPR005126 NapC/NirT cytochrome c, N-terminal D3H41_05830 IPR038266 NapC/NirT cytochrome c superfamily D3H41_05830 IPR011031 Multihaem cytochrome D3H41_05830 IPR024717 Denitrification system component NapC/NirT/NrfH D3H41_05830 IPR036280 Multiheme cytochrome superfamily D3H41_05835 IPR041954 Trimethylamine-N-oxide reductase-like, molybdopterin-binding domain D3H41_05835 IPR011887 Trimethylamine-N-oxide reductase TorA D3H41_05835 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal D3H41_05835 IPR006311 Twin-arginine translocation pathway, signal sequence D3H41_05835 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site D3H41_05835 IPR009010 Aspartate decarboxylase-like domain superfamily D3H41_05835 IPR041460 Molybdopterin oxidoreductase, N-terminal D3H41_05835 IPR006657 Molybdopterin dinucleotide-binding domain D3H41_05835 IPR006656 Molybdopterin oxidoreductase D3H41_05850 IPR004097 DHHA2 domain D3H41_05850 IPR038763 DHH phosphoesterase superfamily D3H41_05850 IPR022934 Manganese-dependent inorganic pyrophosphatase, probable D3H41_05850 IPR038222 DHHA2 domain superfamily D3H41_05850 IPR001667 DDH domain D3H41_05860 IPR003593 AAA+ ATPase domain D3H41_05860 IPR017871 ABC transporter, conserved site D3H41_05860 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_05860 IPR003439 ABC transporter-like D3H41_05865 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_05865 IPR003593 AAA+ ATPase domain D3H41_05865 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal D3H41_05865 IPR003439 ABC transporter-like D3H41_05870 IPR025966 Oligopeptide transport permease C-like, N-terminal domain D3H41_05870 IPR035906 MetI-like superfamily D3H41_05870 IPR000515 ABC transporter type 1, transmembrane domain MetI-like D3H41_05875 IPR035906 MetI-like superfamily D3H41_05875 IPR000515 ABC transporter type 1, transmembrane domain MetI-like D3H41_05880 IPR030678 Peptide/nickel binding protein, MppA-type D3H41_05880 IPR023765 Solute-binding protein family 5, conserved site D3H41_05880 IPR000914 Solute-binding protein family 5 domain D3H41_05880 IPR039424 Solute-binding protein family 5 D3H41_05885 IPR002078 RNA polymerase sigma factor 54 interaction domain D3H41_05885 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 D3H41_05885 IPR003593 AAA+ ATPase domain D3H41_05885 IPR009057 Homeobox-like domain superfamily D3H41_05885 IPR025944 Sigma-54 interaction domain, conserved site D3H41_05885 IPR014317 Transcription activator PspF D3H41_05885 IPR002197 DNA binding HTH domain, Fis-type D3H41_05885 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_05890 IPR007157 PspA/IM30 D3H41_05890 IPR014319 Phage shock protein, PspA D3H41_05895 IPR009554 Phage shock protein B D3H41_05900 IPR014320 Phage shock protein, PspC D3H41_05900 IPR007168 Phage shock protein, PspC, N-terminal D3H41_05910 IPR022824 Multidrug resistance protein MdtA D3H41_05910 IPR006143 RND efflux pump, membrane fusion protein D3H41_05910 IPR039562 Membrane fusion protein, biotin-lipoyl like domain D3H41_05915 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D3H41_05915 IPR001036 Acriflavin resistance protein D3H41_05920 IPR011257 DNA glycosylase D3H41_05920 IPR004597 DNA-3-methyladenine glycosylase I D3H41_05920 IPR005019 Methyladenine glycosylase D3H41_05925 IPR004961 Lipase chaperone D3H41_05930 IPR029058 Alpha/Beta hydrolase fold D3H41_05930 IPR000073 Alpha/beta hydrolase fold-1 D3H41_05935 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme D3H41_05935 IPR006233 Cystathionine beta-lyase, bacterial D3H41_05935 IPR015424 Pyridoxal phosphate-dependent transferase D3H41_05935 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 D3H41_05935 IPR015421 Pyridoxal phosphate-dependent transferase, major domain D3H41_05940 IPR001736 Phospholipase D/Transphosphatidylase D3H41_05940 IPR025202 Phospholipase D-like domain D3H41_05940 IPR030840 Cardiolipin synthase A D3H41_05940 IPR022924 Cardiolipin synthase D3H41_05940 IPR027379 Cardiolipin synthase N-terminal D3H41_05945 IPR037272 Sodium:neurotransmitter symporter superfamily D3H41_05945 IPR000175 Sodium:neurotransmitter symporter D3H41_05950 IPR006145 Pseudouridine synthase, RsuA/RluA D3H41_05950 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site D3H41_05950 IPR006508 Pseudouridine synthase, RluA-like D3H41_05950 IPR020103 Pseudouridine synthase, catalytic domain superfamily D3H41_05960 IPR001433 Oxidoreductase FAD/NAD(P)-binding D3H41_05960 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain D3H41_05960 IPR017938 Riboflavin synthase-like beta-barrel D3H41_05960 IPR017927 FAD-binding domain, ferredoxin reductase-type D3H41_05960 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain D3H41_05960 IPR012675 Beta-grasp domain superfamily D3H41_05960 IPR036010 2Fe-2S ferredoxin-like superfamily D3H41_05960 IPR000951 Phthalate dioxygenase reductase D3H41_05960 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain D3H41_05965 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase D3H41_05965 IPR016100 Prismane, alpha-bundle D3H41_05965 IPR016099 Prismane-like, alpha/beta-sandwich D3H41_05965 IPR011254 Prismane-like superfamily D3H41_05965 IPR010048 Hydroxylamine reductase D3H41_05970 IPR003593 AAA+ ATPase domain D3H41_05970 IPR025944 Sigma-54 interaction domain, conserved site D3H41_05970 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 D3H41_05970 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_05970 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 D3H41_05970 IPR029016 GAF-like domain superfamily D3H41_05970 IPR002078 RNA polymerase sigma factor 54 interaction domain D3H41_05970 IPR003018 GAF domain D3H41_05970 IPR009057 Homeobox-like domain superfamily D3H41_05985 IPR000462 CDP-alcohol phosphatidyltransferase D3H41_05990 IPR017871 ABC transporter, conserved site D3H41_05990 IPR003439 ABC transporter-like D3H41_05990 IPR003593 AAA+ ATPase domain D3H41_05990 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_05995 IPR035906 MetI-like superfamily D3H41_05995 IPR000515 ABC transporter type 1, transmembrane domain MetI-like D3H41_06000 IPR027020 Protein ynjB D3H41_06000 IPR006059 Bacterial extracellular solute-binding protein D3H41_06010 IPR010710 Protein of unknown function DUF1289 D3H41_06025 IPR036907 5'-Nucleotidase, C-terminal domain superfamily D3H41_06025 IPR006146 5'-Nucleotidase, conserved site D3H41_06025 IPR006179 5'-Nucleotidase/apyrase D3H41_06025 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type D3H41_06025 IPR029052 Metallo-dependent phosphatase-like D3H41_06025 IPR008334 5'-Nucleotidase, C-terminal D3H41_06035 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily D3H41_06035 IPR020055 Ribosomal protein L25, short-form D3H41_06035 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal D3H41_06035 IPR029751 Ribosomal protein L25 D3H41_06040 IPR005467 Histidine kinase domain D3H41_06040 IPR003660 HAMP domain D3H41_06040 IPR003594 Histidine kinase/HSP90-like ATPase D3H41_06040 IPR004358 Signal transduction histidine kinase-related protein, C-terminal D3H41_06040 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily D3H41_06040 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain D3H41_06040 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3H41_06045 IPR011006 CheY-like superfamily D3H41_06045 IPR001867 OmpR/PhoB-type DNA-binding domain D3H41_06045 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_06045 IPR039420 Transcriptional regulatory protein WalR-like D3H41_06045 IPR001789 Signal transduction response regulator, receiver domain D3H41_06055 IPR006935 Helicase/UvrB, N-terminal D3H41_06055 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_06055 IPR011332 Zinc-binding ribosomal protein D3H41_06055 IPR014001 Helicase superfamily 1/2, ATP-binding domain D3H41_06055 IPR001650 Helicase, C-terminal D3H41_06060 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site D3H41_06060 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain D3H41_06060 IPR020103 Pseudouridine synthase, catalytic domain superfamily D3H41_06060 IPR006145 Pseudouridine synthase, RsuA/RluA D3H41_06060 IPR002942 RNA-binding S4 domain D3H41_06060 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F D3H41_06060 IPR036986 RNA-binding S4 domain superfamily D3H41_06070 IPR011701 Major facilitator superfamily D3H41_06070 IPR036259 MFS transporter superfamily D3H41_06070 IPR004734 Multidrug resistance protein D3H41_06070 IPR020846 Major facilitator superfamily domain D3H41_06070 IPR004812 Drug resistance transporter Bcr/CmlA subfamily D3H41_06080 IPR036291 NAD(P)-binding domain superfamily D3H41_06080 IPR021295 Protein of unknown function DUF2867 D3H41_06080 IPR016040 NAD(P)-binding domain D3H41_06085 IPR002528 Multi antimicrobial extrusion protein D3H41_06090 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_06090 IPR017871 ABC transporter, conserved site D3H41_06090 IPR003439 ABC transporter-like D3H41_06090 IPR003593 AAA+ ATPase domain D3H41_06105 IPR004670 Na+/H+ antiporter NhaA D3H41_06105 IPR023171 Na/H antiporter domain superfamily D3H41_06110 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily D3H41_06110 IPR001647 DNA-binding HTH domain, TetR-type D3H41_06110 IPR009057 Homeobox-like domain superfamily D3H41_06110 IPR023772 DNA-binding HTH domain, TetR-type, conserved site D3H41_06110 IPR032551 HTH-type transcriptional repressor, C-terminal D3H41_06115 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily D3H41_06115 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily D3H41_06115 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal D3H41_06115 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal D3H41_06115 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal D3H41_06115 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain D3H41_06115 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type D3H41_06120 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative D3H41_06120 IPR010758 Trans-2-enoyl-CoA reductase D3H41_06120 IPR024906 Enoyl reductase FAD binding domain D3H41_06125 IPR006037 Regulator of K+ conductance, C-terminal D3H41_06125 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily D3H41_06125 IPR023017 Transport protein YbjL, putative D3H41_06125 IPR006512 YidE/YbjL duplication D3H41_06130 IPR036249 Thioredoxin-like superfamily D3H41_06130 IPR002109 Glutaredoxin D3H41_06130 IPR014025 Glutaredoxin subgroup D3H41_06130 IPR011902 Glutaredoxin, GrxA D3H41_06135 IPR039697 Iron-type alcohol dehydrogenase-like D3H41_06135 IPR018211 Alcohol dehydrogenase, iron-type, conserved site D3H41_06135 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA D3H41_06140 IPR009057 Homeobox-like domain superfamily D3H41_06140 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_06140 IPR000281 Helix-turn-helix protein RpiR D3H41_06140 IPR035472 RpiR-like, SIS domain D3H41_06140 IPR001347 Sugar isomerase (SIS) D3H41_06145 IPR015421 Pyridoxal phosphate-dependent transferase, major domain D3H41_06145 IPR015424 Pyridoxal phosphate-dependent transferase D3H41_06145 IPR002129 Pyridoxal phosphate-dependent decarboxylase D3H41_06145 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent D3H41_06155 IPR005642 Lysine exporter LysO D3H41_06175 IPR007077 TfoX, C-terminal D3H41_06175 IPR007076 TfoX, N-terminal D3H41_06175 IPR026256 Transcriptional regulator, TfoX/Sxy-type D3H41_06190 IPR003594 Histidine kinase/HSP90-like ATPase D3H41_06190 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3H41_06190 IPR005467 Histidine kinase domain D3H41_06190 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain D3H41_06190 IPR004358 Signal transduction histidine kinase-related protein, C-terminal D3H41_06190 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily D3H41_06190 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF D3H41_06200 IPR015424 Pyridoxal phosphate-dependent transferase D3H41_06200 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 D3H41_06200 IPR015421 Pyridoxal phosphate-dependent transferase, major domain D3H41_06200 IPR022278 Phosphoserine aminotransferase D3H41_06200 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site D3H41_06200 IPR000192 Aminotransferase class V domain D3H41_06205 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site D3H41_06205 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme D3H41_06205 IPR011780 D-serine ammonia-lyase D3H41_06205 IPR001926 Pyridoxal-phosphate dependent enzyme D3H41_06210 IPR003593 AAA+ ATPase domain D3H41_06210 IPR011527 ABC transporter type 1, transmembrane domain D3H41_06210 IPR036640 ABC transporter type 1, transmembrane domain superfamily D3H41_06210 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC D3H41_06210 IPR003439 ABC transporter-like D3H41_06210 IPR017871 ABC transporter, conserved site D3H41_06210 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_06215 IPR036640 ABC transporter type 1, transmembrane domain superfamily D3H41_06215 IPR011527 ABC transporter type 1, transmembrane domain D3H41_06215 IPR003593 AAA+ ATPase domain D3H41_06215 IPR017871 ABC transporter, conserved site D3H41_06215 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD D3H41_06215 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_06215 IPR039421 Type I protein exporter D3H41_06215 IPR003439 ABC transporter-like D3H41_06220 IPR023753 FAD/NAD(P)-binding domain D3H41_06220 IPR005982 Thioredoxin reductase D3H41_06220 IPR036188 FAD/NAD(P)-binding domain superfamily D3H41_06220 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site D3H41_06230 IPR000192 Aminotransferase class V domain D3H41_06230 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site D3H41_06230 IPR010970 Cysteine desulfurase, SufS D3H41_06230 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 D3H41_06230 IPR015421 Pyridoxal phosphate-dependent transferase, major domain D3H41_06230 IPR015424 Pyridoxal phosphate-dependent transferase D3H41_06240 IPR000160 GGDEF domain D3H41_06240 IPR001789 Signal transduction response regulator, receiver domain D3H41_06240 IPR029787 Nucleotide cyclase D3H41_06240 IPR011006 CheY-like superfamily D3H41_06245 IPR031312 Sodium/sulphate symporter, conserved site D3H41_06245 IPR001898 Solute carrier family 13 D3H41_06250 IPR003848 Domain of unknown function DUF218 D3H41_06250 IPR023604 Uncharacterised protein family SanA D3H41_06255 IPR012302 Malic enzyme, NAD-binding D3H41_06255 IPR012301 Malic enzyme, N-terminal domain D3H41_06255 IPR001891 Malic oxidoreductase D3H41_06255 IPR037062 Malic enzyme, N-terminal domain superfamily D3H41_06255 IPR036291 NAD(P)-binding domain superfamily D3H41_06255 IPR023667 NAD-dependent malic enzyme, proteobacteria D3H41_06255 IPR015884 Malic enzyme, conserved site D3H41_06260 IPR001650 Helicase, C-terminal D3H41_06260 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal D3H41_06260 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_06260 IPR014001 Helicase superfamily 1/2, ATP-binding domain D3H41_06260 IPR010225 ATP-dependent helicase HrpB D3H41_06260 IPR007502 Helicase-associated domain D3H41_06260 IPR011545 DEAD/DEAH box helicase domain D3H41_06270 IPR018946 Alkaline phosphatase D-related D3H41_06270 IPR032093 Phospholipase D, N-terminal D3H41_06270 IPR038607 PhoD-like superfamily D3H41_06270 IPR006311 Twin-arginine translocation pathway, signal sequence D3H41_06270 IPR008963 Purple acid phosphatase-like, N-terminal D3H41_06275 IPR028923 SAICAR synthetase/ADE2, N-terminal D3H41_06275 IPR018236 SAICAR synthetase, conserved site D3H41_06275 IPR014106 Phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio-type D3H41_06295 IPR028974 TSP type-3 repeat D3H41_06295 IPR008722 Outer membrane porin F, N-terminal D3H41_06295 IPR006690 Outer membrane protein, OmpA-like, conserved site D3H41_06295 IPR006665 OmpA-like domain D3H41_06295 IPR006664 Outer membrane protein, bacterial D3H41_06295 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel D3H41_06295 IPR036737 OmpA-like domain superfamily D3H41_06310 IPR016164 FAD-linked oxidase-like, C-terminal D3H41_06310 IPR036318 FAD-binding, type PCMH-like superfamily D3H41_06310 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site D3H41_06310 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain D3H41_06310 IPR006094 FAD linked oxidase, N-terminal D3H41_06310 IPR004113 FAD-linked oxidase, C-terminal D3H41_06310 IPR016166 FAD-binding domain, PCMH-type D3H41_06310 IPR009051 Alpha-helical ferredoxin D3H41_06315 IPR007318 Phospholipid methyltransferase D3H41_06325 IPR022313 Phenylalanine/histidine ammonia-lyases, active site D3H41_06325 IPR008948 L-Aspartase-like D3H41_06325 IPR005921 Histidine ammonia-lyase D3H41_06325 IPR024083 Fumarase/histidase, N-terminal D3H41_06325 IPR001106 Aromatic amino acid lyase D3H41_06330 IPR036190 Urocanase superfamily D3H41_06330 IPR035085 Urocanase, Rossmann-like domain D3H41_06330 IPR023637 Urocanase D3H41_06330 IPR035401 Urocanase, C-terminal domain D3H41_06330 IPR023636 Urocanase conserved site D3H41_06330 IPR035400 Urocanase, N-terminal domain D3H41_06330 IPR038364 Urocanase, central domain superfamily D3H41_06335 IPR005923 Formiminoglutamase D3H41_06335 IPR020855 Ureohydrolase, manganese-binding site D3H41_06335 IPR023696 Ureohydrolase domain superfamily D3H41_06335 IPR006035 Ureohydrolase D3H41_06340 IPR032466 Metal-dependent hydrolase D3H41_06340 IPR011059 Metal-dependent hydrolase, composite domain superfamily D3H41_06340 IPR005920 Imidazolonepropionase D3H41_06340 IPR006680 Amidohydrolase-related D3H41_06345 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_06345 IPR010248 Histidine utilization repressor D3H41_06345 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily D3H41_06345 IPR000524 Transcription regulator HTH, GntR D3H41_06345 IPR011663 UbiC transcription regulator-associated D3H41_06345 IPR036390 Winged helix DNA-binding domain superfamily D3H41_06360 IPR033728 Threonine-tRNA ligase catalytic core domain D3H41_06360 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) D3H41_06360 IPR012676 TGS-like D3H41_06360 IPR006195 Aminoacyl-tRNA synthetase, class II D3H41_06360 IPR002320 Threonine-tRNA ligase, class IIa D3H41_06360 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily D3H41_06360 IPR012947 Threonyl/alanyl tRNA synthetase, SAD D3H41_06360 IPR004154 Anticodon-binding D3H41_06360 IPR036621 Anticodon-binding domain superfamily D3H41_06360 IPR012675 Beta-grasp domain superfamily D3H41_06360 IPR004095 TGS D3H41_06365 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily D3H41_06365 IPR019813 Translation initiation factor 3, conserved site D3H41_06365 IPR001288 Translation initiation factor 3 D3H41_06365 IPR019815 Translation initiation factor 3, C-terminal D3H41_06365 IPR019814 Translation initiation factor 3, N-terminal D3H41_06365 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily D3H41_06370 IPR021137 Ribosomal protein L35 D3H41_06370 IPR001706 Ribosomal protein L35, non-mitochondrial D3H41_06370 IPR037229 Ribosomal protein L35 superfamily D3H41_06370 IPR018265 Ribosomal protein L35, conserved site D3H41_06375 IPR005813 Ribosomal protein L20 D3H41_06375 IPR035566 Ribosomal protein L20, C-terminal D3H41_06380 IPR035439 UPF0145 domain superfamily D3H41_06380 IPR002765 Uncharacterised protein family UPF0145 D3H41_06415 IPR006195 Aminoacyl-tRNA synthetase, class II D3H41_06415 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit D3H41_06415 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm D3H41_06415 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal D3H41_06415 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial D3H41_06415 IPR002319 Phenylalanyl-tRNA synthetase D3H41_06420 IPR005146 B3/B4 tRNA-binding domain D3H41_06420 IPR002547 tRNA-binding domain D3H41_06420 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain D3H41_06420 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 D3H41_06420 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit D3H41_06420 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain D3H41_06420 IPR005147 tRNA synthetase, B5-domain D3H41_06420 IPR012340 Nucleic acid-binding, OB-fold D3H41_06420 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily D3H41_06420 IPR009061 Putative DNA-binding domain superfamily D3H41_06420 IPR005121 Ferrodoxin-fold anticodon-binding domain D3H41_06430 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily D3H41_06430 IPR020816 Histone-like DNA-binding protein, conserved site D3H41_06430 IPR005684 Integration host factor, alpha subunit D3H41_06430 IPR000119 Histone-like DNA-binding protein D3H41_06440 IPR025835 Thiopurine S-methyltransferase D3H41_06440 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3H41_06440 IPR008854 TPMT family D3H41_06440 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification D3H41_06445 IPR011761 ATP-grasp fold D3H41_06445 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase D3H41_06445 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type D3H41_06445 IPR011054 Rudiment single hybrid motif D3H41_06445 IPR013815 ATP-grasp fold, subdomain 1 D3H41_06445 IPR016185 Pre-ATP-grasp domain superfamily D3H41_06455 IPR020797 Cytidine deaminase, bacteria D3H41_06455 IPR016193 Cytidine deaminase-like D3H41_06455 IPR016192 APOBEC/CMP deaminase, zinc-binding D3H41_06455 IPR002125 Cytidine and deoxycytidylate deaminase domain D3H41_06455 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain D3H41_06455 IPR006263 Cytidine deaminase, homodimeric D3H41_06460 IPR005261 Conserved hypothetical protein CHP00659 D3H41_06460 IPR007300 CidB/LrgB family D3H41_06465 IPR005538 LrgA/CidA family D3H41_06465 IPR022957 Uncharacterised protein family UPF0299 D3H41_06470 IPR013620 Exodeoxyribonuclease I, C-terminal D3H41_06470 IPR023607 Exodeoxyribonuclease I D3H41_06470 IPR034748 Exonuclease I, C-terminal alpha-helical domain D3H41_06470 IPR038649 Exonuclease I, SH3-like domain superfamily D3H41_06470 IPR034747 Exonuclease I, SH3-like domain D3H41_06470 IPR013520 Exonuclease, RNase T/DNA polymerase III D3H41_06470 IPR012337 Ribonuclease H-like superfamily D3H41_06470 IPR036397 Ribonuclease H superfamily D3H41_06480 IPR036291 NAD(P)-binding domain superfamily D3H41_06480 IPR000534 Semialdehyde dehydrogenase, NAD-binding D3H41_06480 IPR016040 NAD(P)-binding domain D3H41_06485 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily D3H41_06485 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like D3H41_06485 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic D3H41_06485 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal D3H41_06490 IPR003805 Adenosylcobinamide-GDP ribazoletransferase D3H41_06495 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_06495 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase D3H41_06510 IPR016681 Succinylglutamate desuccinylase D3H41_06510 IPR007036 Succinylglutamate desuccinylase/aspartoacylase D3H41_06515 IPR000522 ABC transporter, permease protein, BtuC-like D3H41_06515 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC D3H41_06515 IPR037294 ABC transporter, BtuC-like D3H41_06520 IPR003593 AAA+ ATPase domain D3H41_06520 IPR023693 ABC transporter, vitamin B12, BtuD D3H41_06520 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_06520 IPR003439 ABC transporter-like D3H41_06540 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_06540 IPR000847 Transcription regulator HTH, LysR D3H41_06540 IPR005119 LysR, substrate-binding D3H41_06540 IPR036390 Winged helix DNA-binding domain superfamily D3H41_06550 IPR002725 Protein of unknown function DUF45 D3H41_06555 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3H41_06555 IPR016909 Ribosomal RNA large subunit methyltransferase F D3H41_06555 IPR010286 METTL16/RlmF family D3H41_06575 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_06575 IPR008920 Transcription regulator FadR/GntR, C-terminal D3H41_06575 IPR000524 Transcription regulator HTH, GntR D3H41_06575 IPR036390 Winged helix DNA-binding domain superfamily D3H41_06580 IPR015590 Aldehyde dehydrogenase domain D3H41_06580 IPR016162 Aldehyde dehydrogenase, N-terminal D3H41_06580 IPR016163 Aldehyde dehydrogenase, C-terminal D3H41_06580 IPR016161 Aldehyde/histidinol dehydrogenase D3H41_06585 IPR008794 Proline racemase family D3H41_06600 IPR023401 Ornithine cyclodeaminase, N-terminal D3H41_06600 IPR036291 NAD(P)-binding domain superfamily D3H41_06600 IPR003462 Ornithine cyclodeaminase/mu-crystallin D3H41_06605 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA D3H41_06605 IPR020624 Schiff base-forming aldolase, conserved site D3H41_06605 IPR020625 Schiff base-forming aldolase, active site D3H41_06605 IPR002220 DapA-like D3H41_06605 IPR013785 Aldolase-type TIM barrel D3H41_06610 IPR003439 ABC transporter-like D3H41_06610 IPR017871 ABC transporter, conserved site D3H41_06610 IPR008995 Molybdate/tungstate binding, C-terminal D3H41_06610 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_06610 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit D3H41_06610 IPR013611 Transport-associated OB, type 2 D3H41_06610 IPR003593 AAA+ ATPase domain D3H41_06610 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA D3H41_06615 IPR000515 ABC transporter type 1, transmembrane domain MetI-like D3H41_06615 IPR035906 MetI-like superfamily D3H41_06620 IPR000515 ABC transporter type 1, transmembrane domain MetI-like D3H41_06620 IPR035906 MetI-like superfamily D3H41_06630 IPR000601 PKD domain D3H41_06630 IPR002169 Peptidase M9A/M9B, collagenase, bacterial D3H41_06630 IPR013661 Peptidase M9, collagenase, N-terminal domain D3H41_06630 IPR013783 Immunoglobulin-like fold D3H41_06630 IPR022409 PKD/Chitinase domain D3H41_06630 IPR035986 PKD domain superfamily D3H41_06640 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_06640 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal D3H41_06640 IPR003593 AAA+ ATPase domain D3H41_06640 IPR017871 ABC transporter, conserved site D3H41_06640 IPR003439 ABC transporter-like D3H41_06645 IPR003593 AAA+ ATPase domain D3H41_06645 IPR003439 ABC transporter-like D3H41_06645 IPR017871 ABC transporter, conserved site D3H41_06645 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal D3H41_06645 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_06650 IPR025966 Oligopeptide transport permease C-like, N-terminal domain D3H41_06650 IPR000515 ABC transporter type 1, transmembrane domain MetI-like D3H41_06650 IPR035906 MetI-like superfamily D3H41_06655 IPR035906 MetI-like superfamily D3H41_06655 IPR000515 ABC transporter type 1, transmembrane domain MetI-like D3H41_06660 IPR000914 Solute-binding protein family 5 domain D3H41_06660 IPR030678 Peptide/nickel binding protein, MppA-type D3H41_06660 IPR039424 Solute-binding protein family 5 D3H41_06660 IPR023765 Solute-binding protein family 5, conserved site D3H41_06665 IPR036264 Bacterial exopeptidase dimerisation domain D3H41_06665 IPR010162 Peptidase M20B, peptidase T-like D3H41_06665 IPR002933 Peptidase M20 D3H41_06665 IPR011650 Peptidase M20, dimerisation domain D3H41_06665 IPR008007 Peptidase M42 D3H41_06665 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site D3H41_06670 IPR037523 Vicinal oxygen chelate (VOC) domain D3H41_06670 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain D3H41_06670 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D3H41_06670 IPR041736 4-hydroxyphenylpyruvate dioxygenase, N-terminal D3H41_06670 IPR041735 4-hydroxyphenylpyruvate dioxygenase, C-terminal D3H41_06670 IPR005956 4-hydroxyphenylpyruvate dioxygenase D3H41_06675 IPR005708 Homogentisate 1,2-dioxygenase D3H41_06675 IPR014710 RmlC-like jelly roll fold D3H41_06675 IPR011051 RmlC-like cupin domain superfamily D3H41_06685 IPR034330 Glutathione S-transferases, class Zeta , C-terminal D3H41_06685 IPR034333 Glutathione S-transferases, class Zeta , N-terminal D3H41_06685 IPR010987 Glutathione S-transferase, C-terminal-like D3H41_06685 IPR036282 Glutathione S-transferase, C-terminal domain superfamily D3H41_06685 IPR005955 Glutathione S-transferases, class Zeta D3H41_06685 IPR004046 Glutathione S-transferase, C-terminal D3H41_06685 IPR036249 Thioredoxin-like superfamily D3H41_06685 IPR004045 Glutathione S-transferase, N-terminal D3H41_06685 IPR040079 Glutathione Transferase family D3H41_06735 IPR009739 Lysozyme inhibitor LprI, N-terminal D3H41_06760 IPR003844 Uncharacterised protein family UPF0060 D3H41_06775 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal D3H41_06780 IPR008146 Glutamine synthetase, catalytic domain D3H41_06780 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain D3H41_06780 IPR036651 Glutamine synthetase, N-terminal domain superfamily D3H41_06780 IPR027303 Glutamine synthetase, glycine-rich site D3H41_06790 IPR011697 Peptidase C26 D3H41_06790 IPR017926 Glutamine amidotransferase D3H41_06790 IPR029062 Class I glutamine amidotransferase-like D3H41_06795 IPR011051 RmlC-like cupin domain superfamily D3H41_06795 IPR001387 Cro/C1-type helix-turn-helix domain D3H41_06795 IPR013096 Cupin 2, conserved barrel D3H41_06795 IPR010982 Lambda repressor-like, DNA-binding domain superfamily D3H41_06795 IPR014710 RmlC-like jelly roll fold D3H41_06800 IPR016162 Aldehyde dehydrogenase, N-terminal D3H41_06800 IPR015590 Aldehyde dehydrogenase domain D3H41_06800 IPR016163 Aldehyde dehydrogenase, C-terminal D3H41_06800 IPR016161 Aldehyde/histidinol dehydrogenase D3H41_06800 IPR029510 Aldehyde dehydrogenase, glutamic acid active site D3H41_06800 IPR016160 Aldehyde dehydrogenase, cysteine active site D3H41_06805 IPR006076 FAD dependent oxidoreductase D3H41_06805 IPR036188 FAD/NAD(P)-binding domain superfamily D3H41_06810 IPR003010 Carbon-nitrogen hydrolase D3H41_06810 IPR036526 Carbon-nitrogen hydrolase superfamily D3H41_06815 IPR017754 Agmatine deiminase D3H41_06815 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type D3H41_06820 IPR016163 Aldehyde dehydrogenase, C-terminal D3H41_06820 IPR016160 Aldehyde dehydrogenase, cysteine active site D3H41_06820 IPR029510 Aldehyde dehydrogenase, glutamic acid active site D3H41_06820 IPR016162 Aldehyde dehydrogenase, N-terminal D3H41_06820 IPR015590 Aldehyde dehydrogenase domain D3H41_06820 IPR010102 Succinate semialdehyde dehydrogenase D3H41_06820 IPR016161 Aldehyde/histidinol dehydrogenase D3H41_06825 IPR015421 Pyridoxal phosphate-dependent transferase, major domain D3H41_06825 IPR004632 4-aminobutyrate aminotransferase, bacterial D3H41_06825 IPR005814 Aminotransferase class-III D3H41_06825 IPR015424 Pyridoxal phosphate-dependent transferase D3H41_06825 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 D3H41_06830 IPR035919 EAL domain superfamily D3H41_06830 IPR001633 EAL domain D3H41_06830 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain D3H41_06840 IPR000835 MarR-type HTH domain D3H41_06840 IPR023187 Transcriptional regulator MarR-type, conserved site D3H41_06840 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_06840 IPR036390 Winged helix DNA-binding domain superfamily D3H41_06845 IPR038056 YjbR-like superfamily D3H41_06845 IPR007351 Uncharacterised protein YjbR D3H41_06870 IPR005467 Histidine kinase domain D3H41_06870 IPR011006 CheY-like superfamily D3H41_06870 IPR019247 Histidine kinase BarA, N-terminal D3H41_06870 IPR036641 HPT domain superfamily D3H41_06870 IPR004358 Signal transduction histidine kinase-related protein, C-terminal D3H41_06870 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain D3H41_06870 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3H41_06870 IPR001789 Signal transduction response regulator, receiver domain D3H41_06870 IPR003660 HAMP domain D3H41_06870 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily D3H41_06870 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain D3H41_06870 IPR003594 Histidine kinase/HSP90-like ATPase D3H41_06875 IPR001633 EAL domain D3H41_06875 IPR035919 EAL domain superfamily D3H41_06875 IPR000160 GGDEF domain D3H41_06875 IPR005330 MHYT domain D3H41_06875 IPR029787 Nucleotide cyclase D3H41_06885 IPR013360 Pilus biogenesis/stability type IV, PilW D3H41_06885 IPR019734 Tetratricopeptide repeat D3H41_06885 IPR013026 Tetratricopeptide repeat-containing domain D3H41_06885 IPR011990 Tetratricopeptide-like helical domain superfamily D3H41_06890 IPR029062 Class I glutamine amidotransferase-like D3H41_06890 IPR005697 Homoserine O-succinyltransferase MetA D3H41_06890 IPR033752 MetA family D3H41_06900 IPR000390 Small multidrug resistance protein family D3H41_06905 IPR004960 Bacterial lipid A biosynthesis acyltransferase D3H41_06905 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase D3H41_06910 IPR001333 Peptidase M32, carboxypeptidase Taq D3H41_06915 IPR001123 Amino acid exporter protein, LeuE-type D3H41_06925 IPR001463 Sodium:alanine symporter D3H41_06950 IPR000917 Sulfatase, N-terminal D3H41_06950 IPR012160 Lipoteichoic acid synthase-like D3H41_06950 IPR017850 Alkaline-phosphatase-like, core domain superfamily D3H41_06955 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain D3H41_06960 IPR035906 MetI-like superfamily D3H41_06960 IPR000515 ABC transporter type 1, transmembrane domain MetI-like D3H41_06965 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_06965 IPR003593 AAA+ ATPase domain D3H41_06965 IPR005892 Glycine betaine transport ATP-binding subunit D3H41_06965 IPR000644 CBS domain D3H41_06965 IPR017871 ABC transporter, conserved site D3H41_06965 IPR003439 ABC transporter-like D3H41_06980 IPR000060 BCCT transporter family D3H41_06990 IPR000182 GNAT domain D3H41_06990 IPR012772 L-2,4-diaminobutyric acid acetyltransferase D3H41_06990 IPR016181 Acyl-CoA N-acyltransferase D3H41_06995 IPR005814 Aminotransferase class-III D3H41_06995 IPR015424 Pyridoxal phosphate-dependent transferase D3H41_06995 IPR012773 Ectoine biosynthetic protein D3H41_06995 IPR015421 Pyridoxal phosphate-dependent transferase, major domain D3H41_06995 IPR004637 2,4-diaminobutyrate 4-transaminase D3H41_06995 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 D3H41_07000 IPR011051 RmlC-like cupin domain superfamily D3H41_07000 IPR010462 Ectoine synthase D3H41_07000 IPR014710 RmlC-like jelly roll fold D3H41_07005 IPR036393 Acetylglutamate kinase-like superfamily D3H41_07005 IPR027795 CASTOR, ACT domain D3H41_07005 IPR001048 Aspartate/glutamate/uridylate kinase D3H41_07010 IPR024607 Sulfatase, conserved site D3H41_07010 IPR017850 Alkaline-phosphatase-like, core domain superfamily D3H41_07010 IPR000917 Sulfatase, N-terminal D3H41_07020 IPR016187 C-type lectin fold D3H41_07020 IPR005532 Sulfatase-modifying factor enzyme D3H41_07020 IPR042095 Sulfatase-modifying factor enzyme superfamily D3H41_07025 IPR023885 4Fe4S-binding SPASM domain D3H41_07025 IPR013785 Aldolase-type TIM barrel D3H41_07025 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme D3H41_07025 IPR007197 Radical SAM D3H41_07040 IPR017850 Alkaline-phosphatase-like, core domain superfamily D3H41_07040 IPR024607 Sulfatase, conserved site D3H41_07040 IPR000917 Sulfatase, N-terminal D3H41_07045 IPR000917 Sulfatase, N-terminal D3H41_07045 IPR017850 Alkaline-phosphatase-like, core domain superfamily D3H41_07045 IPR024607 Sulfatase, conserved site D3H41_07055 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_07055 IPR005074 Peptidase C39, bacteriocin processing D3H41_07055 IPR003593 AAA+ ATPase domain D3H41_07055 IPR011527 ABC transporter type 1, transmembrane domain D3H41_07055 IPR010132 ATPase, type I secretion system, HlyB D3H41_07055 IPR017871 ABC transporter, conserved site D3H41_07055 IPR036640 ABC transporter type 1, transmembrane domain superfamily D3H41_07055 IPR003439 ABC transporter-like D3H41_07055 IPR039395 Peptidase C39-like A D3H41_07055 IPR039421 Type I protein exporter D3H41_07060 IPR006144 Secretion protein HlyD, conserved site D3H41_07060 IPR010129 Type I secretion membrane fusion protein, HlyD family D3H41_07065 IPR003423 Outer membrane efflux protein D3H41_07065 IPR010130 Type I secretion outer membrane protein, TolC D3H41_07080 IPR018356 Transcription regulator, HTH DeoR-type, conserved site D3H41_07080 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_07080 IPR036390 Winged helix DNA-binding domain superfamily D3H41_07080 IPR001034 DeoR-type HTH domain D3H41_07080 IPR014036 DeoR C-terminal sensor domain D3H41_07080 IPR037171 NagB/RpiA transferase-like D3H41_07085 IPR000683 Oxidoreductase, N-terminal D3H41_07085 IPR036291 NAD(P)-binding domain superfamily D3H41_07085 IPR004104 Oxidoreductase, C-terminal D3H41_07090 IPR038084 GlcG-like domain superfamily D3H41_07090 IPR010371 Uncharacterised protein family UPF0303 D3H41_07090 IPR005624 Haem-degrading D3H41_07095 IPR000160 GGDEF domain D3H41_07095 IPR029787 Nucleotide cyclase D3H41_07095 IPR001789 Signal transduction response regulator, receiver domain D3H41_07095 IPR011006 CheY-like superfamily D3H41_07115 IPR001898 Solute carrier family 13 D3H41_07115 IPR031312 Sodium/sulphate symporter, conserved site D3H41_07120 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain D3H41_07120 IPR005467 Histidine kinase domain D3H41_07120 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3H41_07120 IPR004358 Signal transduction histidine kinase-related protein, C-terminal D3H41_07120 IPR003594 Histidine kinase/HSP90-like ATPase D3H41_07120 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily D3H41_07125 IPR025944 Sigma-54 interaction domain, conserved site D3H41_07125 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_07125 IPR001789 Signal transduction response regulator, receiver domain D3H41_07125 IPR002078 RNA polymerase sigma factor 54 interaction domain D3H41_07125 IPR011006 CheY-like superfamily D3H41_07125 IPR009057 Homeobox-like domain superfamily D3H41_07125 IPR002197 DNA binding HTH domain, Fis-type D3H41_07130 IPR001633 EAL domain D3H41_07130 IPR000160 GGDEF domain D3H41_07130 IPR035919 EAL domain superfamily D3H41_07130 IPR035965 PAS domain superfamily D3H41_07130 IPR029787 Nucleotide cyclase D3H41_07130 IPR005330 MHYT domain D3H41_07135 IPR006675 HDIG domain D3H41_07135 IPR021812 Protein of unknown function DUF3391 D3H41_07135 IPR003607 HD/PDEase domain D3H41_07135 IPR037522 HD-GYP domain D3H41_07135 IPR006674 HD domain D3H41_07140 IPR004778 Homoserine/Threonine efflux protein D3H41_07140 IPR001123 Amino acid exporter protein, LeuE-type D3H41_07145 IPR016905 Glycyl radical enzyme, HI0521, predicted D3H41_07150 IPR007197 Radical SAM D3H41_07150 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain D3H41_07150 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site D3H41_07150 IPR034457 Organic radical-activating enzymes D3H41_07150 IPR001989 Radical-activating enzyme, conserved site D3H41_07150 IPR012839 Organic radical enzyme activase D3H41_07150 IPR013785 Aldolase-type TIM barrel D3H41_07150 IPR023912 Putative glycyl-radical enzyme activating enzyme YjjW D3H41_07160 IPR005496 Integral membrane protein TerC D3H41_07170 IPR037522 HD-GYP domain D3H41_07170 IPR003607 HD/PDEase domain D3H41_07170 IPR006674 HD domain D3H41_07170 IPR006675 HDIG domain D3H41_07175 IPR018211 Alcohol dehydrogenase, iron-type, conserved site D3H41_07175 IPR039697 Iron-type alcohol dehydrogenase-like D3H41_07175 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA D3H41_07180 IPR013061 Tryptophan/tryrosine permease, conserved site D3H41_07180 IPR018227 Amino acid/polyamine transporter 2 D3H41_07180 IPR013059 Tryptophan/tyrosine transporter D3H41_07185 IPR037522 HD-GYP domain D3H41_07185 IPR003607 HD/PDEase domain D3H41_07195 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_07195 IPR003439 ABC transporter-like D3H41_07195 IPR017871 ABC transporter, conserved site D3H41_07195 IPR003593 AAA+ ATPase domain D3H41_07200 IPR002491 ABC transporter periplasmic binding domain D3H41_07205 IPR037294 ABC transporter, BtuC-like D3H41_07205 IPR000522 ABC transporter, permease protein, BtuC-like D3H41_07210 IPR000531 TonB-dependent receptor-like, beta-barrel D3H41_07210 IPR037066 TonB-dependent receptor, plug domain superfamily D3H41_07210 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D3H41_07210 IPR010105 TonB-dependent siderophore receptor D3H41_07210 IPR012910 TonB-dependent receptor, plug domain D3H41_07210 IPR010916 TonB box, conserved site D3H41_07210 IPR039423 TonB-dependent receptor-like D3H41_07220 IPR039421 Type I protein exporter D3H41_07220 IPR017871 ABC transporter, conserved site D3H41_07220 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_07220 IPR003439 ABC transporter-like D3H41_07220 IPR003593 AAA+ ATPase domain D3H41_07220 IPR036640 ABC transporter type 1, transmembrane domain superfamily D3H41_07220 IPR011527 ABC transporter type 1, transmembrane domain D3H41_07225 IPR036640 ABC transporter type 1, transmembrane domain superfamily D3H41_07225 IPR039421 Type I protein exporter D3H41_07225 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_07225 IPR017871 ABC transporter, conserved site D3H41_07225 IPR011527 ABC transporter type 1, transmembrane domain D3H41_07225 IPR003593 AAA+ ATPase domain D3H41_07225 IPR003439 ABC transporter-like D3H41_07230 IPR013545 Type II secretion system protein G D3H41_07230 IPR012902 Prokaryotic N-terminal methylation site D3H41_07230 IPR000983 Bacterial general secretion pathway protein G-type pilin D3H41_07230 IPR010054 General secretion pathway protein G D3H41_07240 IPR036390 Winged helix DNA-binding domain superfamily D3H41_07240 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_07240 IPR000847 Transcription regulator HTH, LysR D3H41_07240 IPR005119 LysR, substrate-binding D3H41_07250 IPR000683 Oxidoreductase, N-terminal D3H41_07250 IPR004104 Oxidoreductase, C-terminal D3H41_07250 IPR036291 NAD(P)-binding domain superfamily D3H41_07265 IPR012725 Chaperone DnaK D3H41_07265 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily D3H41_07265 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily D3H41_07265 IPR013126 Heat shock protein 70 family D3H41_07265 IPR018181 Heat shock protein 70, conserved site D3H41_07270 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily D3H41_07270 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily D3H41_07270 IPR018181 Heat shock protein 70, conserved site D3H41_07270 IPR012725 Chaperone DnaK D3H41_07270 IPR013126 Heat shock protein 70 family D3H41_07280 IPR000160 GGDEF domain D3H41_07280 IPR029787 Nucleotide cyclase D3H41_07315 IPR003680 Flavodoxin-like fold D3H41_07315 IPR023048 NADH-azoreductase, FMN-dependent D3H41_07315 IPR029039 Flavoprotein-like superfamily D3H41_07320 IPR011545 DEAD/DEAH box helicase domain D3H41_07320 IPR011709 Domain of unknown function DUF1605 D3H41_07320 IPR007502 Helicase-associated domain D3H41_07320 IPR003593 AAA+ ATPase domain D3H41_07320 IPR014001 Helicase superfamily 1/2, ATP-binding domain D3H41_07320 IPR001650 Helicase, C-terminal D3H41_07320 IPR024590 RNA helicase HrpA, C-terminal D3H41_07320 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_07320 IPR010222 RNA helicase HrpA D3H41_07335 IPR018093 BCCT transporter, conserved site D3H41_07335 IPR000060 BCCT transporter family D3H41_07345 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase D3H41_07345 IPR003362 Bacterial sugar transferase D3H41_07350 IPR029044 Nucleotide-diphospho-sugar transferases D3H41_07355 IPR001296 Glycosyl transferase, family 1 D3H41_07355 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain D3H41_07355 IPR023881 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA D3H41_07385 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain D3H41_07385 IPR001296 Glycosyl transferase, family 1 D3H41_07390 IPR011875 Alpha-maltose-1-phosphate synthase D3H41_07390 IPR001296 Glycosyl transferase, family 1 D3H41_07390 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain D3H41_07395 IPR009057 Homeobox-like domain superfamily D3H41_07395 IPR025944 Sigma-54 interaction domain, conserved site D3H41_07395 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 D3H41_07395 IPR002078 RNA polymerase sigma factor 54 interaction domain D3H41_07395 IPR001789 Signal transduction response regulator, receiver domain D3H41_07395 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_07395 IPR003593 AAA+ ATPase domain D3H41_07395 IPR002197 DNA binding HTH domain, Fis-type D3H41_07395 IPR011006 CheY-like superfamily D3H41_07410 IPR019554 Soluble ligand binding domain D3H41_07410 IPR003715 Polysaccharide export protein D3H41_07420 IPR002645 STAS domain D3H41_07420 IPR036513 STAS domain superfamily D3H41_07420 IPR014237 Anti-sigma F factor antagonist D3H41_07420 IPR003658 Anti-sigma factor antagonist D3H41_07425 IPR016059 DNA ligase, ATP-dependent, conserved site D3H41_07425 IPR012310 DNA ligase, ATP-dependent, central D3H41_07425 IPR029319 DNA ligase, OB-like domain D3H41_07425 IPR012340 Nucleic acid-binding, OB-fold D3H41_07435 IPR002528 Multi antimicrobial extrusion protein D3H41_07440 IPR017938 Riboflavin synthase-like beta-barrel D3H41_07440 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily D3H41_07440 IPR026017 Lumazine-binding domain D3H41_07440 IPR001783 Lumazine-binding protein D3H41_07455 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type D3H41_07455 IPR035909 Methylesterase CheB, C-terminal D3H41_07455 IPR011006 CheY-like superfamily D3H41_07455 IPR001789 Signal transduction response regulator, receiver domain D3H41_07455 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase D3H41_07460 IPR007894 MASE2 D3H41_07460 IPR000160 GGDEF domain D3H41_07460 IPR029787 Nucleotide cyclase D3H41_07470 IPR000064 Endopeptidase, NLPC/P60 domain D3H41_07470 IPR038765 Papain-like cysteine peptidase superfamily D3H41_07475 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain D3H41_07475 IPR033479 Double Cache domain 1 D3H41_07475 IPR003660 HAMP domain D3H41_07475 IPR029151 Periplasmic sensor-like domain superfamily D3H41_07505 IPR023505 N-acetyl-D-glucosamine kinase D3H41_07505 IPR000600 ROK family D3H41_07515 IPR036135 MoeA, N-terminal and linker domain superfamily D3H41_07515 IPR036425 MoaB/Mog-like domain superfamily D3H41_07515 IPR001453 MoaB/Mog domain D3H41_07515 IPR008284 Molybdenum cofactor biosynthesis, conserved site D3H41_07515 IPR038987 Molybdopterin biosynthesis protein MoeA-like D3H41_07515 IPR005111 MoeA, C-terminal, domain IV D3H41_07515 IPR036688 MoeA, C-terminal, domain IV superfamily D3H41_07515 IPR005110 MoeA, N-terminal and linker domain D3H41_07520 IPR029044 Nucleotide-diphospho-sugar transferases D3H41_07520 IPR025877 MobA-like NTP transferase D3H41_07520 IPR013482 Molybdenum cofactor guanylyltransferase D3H41_07525 IPR013611 Transport-associated OB, type 2 D3H41_07525 IPR008995 Molybdate/tungstate binding, C-terminal D3H41_07525 IPR015853 ABC transporter, ferric cation import, FbpC D3H41_07525 IPR017871 ABC transporter, conserved site D3H41_07525 IPR003593 AAA+ ATPase domain D3H41_07525 IPR003439 ABC transporter-like D3H41_07525 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_07530 IPR000515 ABC transporter type 1, transmembrane domain MetI-like D3H41_07530 IPR035906 MetI-like superfamily D3H41_07535 IPR024370 PBP domain D3H41_07540 IPR002197 DNA binding HTH domain, Fis-type D3H41_07540 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 D3H41_07540 IPR002078 RNA polymerase sigma factor 54 interaction domain D3H41_07540 IPR001789 Signal transduction response regulator, receiver domain D3H41_07540 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_07540 IPR009057 Homeobox-like domain superfamily D3H41_07540 IPR011006 CheY-like superfamily D3H41_07540 IPR003593 AAA+ ATPase domain D3H41_07540 IPR025944 Sigma-54 interaction domain, conserved site D3H41_07540 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 D3H41_07545 IPR005467 Histidine kinase domain D3H41_07545 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3H41_07545 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain D3H41_07545 IPR003594 Histidine kinase/HSP90-like ATPase D3H41_07545 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily D3H41_07545 IPR029151 Periplasmic sensor-like domain superfamily D3H41_07545 IPR004358 Signal transduction histidine kinase-related protein, C-terminal D3H41_07555 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_07555 IPR003439 ABC transporter-like D3H41_07555 IPR032781 ABC-transporter extension domain D3H41_07555 IPR003593 AAA+ ATPase domain D3H41_07560 IPR016193 Cytidine deaminase-like D3H41_07560 IPR003786 Sulfur carrier protein FdhD D3H41_07580 IPR020945 DMSO/Nitrate reductase chaperone D3H41_07580 IPR036411 TorD-like superfamily D3H41_07580 IPR036386 HscB, C-terminal domain superfamily D3H41_07580 IPR023069 Chaperone TorD D3H41_07590 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain D3H41_07590 IPR006443 Formate dehydrogenase-N, alpha subunit D3H41_07590 IPR009010 Aspartate decarboxylase-like domain superfamily D3H41_07590 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site D3H41_07590 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site D3H41_07590 IPR006311 Twin-arginine translocation pathway, signal sequence D3H41_07590 IPR006656 Molybdopterin oxidoreductase D3H41_07590 IPR006657 Molybdopterin dinucleotide-binding domain D3H41_07595 IPR000813 7Fe ferredoxin D3H41_07595 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site D3H41_07595 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain D3H41_07710 IPR029020 Ammonium/urea transporter D3H41_07710 IPR024041 Ammonium transporter AmtB-like domain D3H41_07710 IPR018047 Ammonium transporter, conserved site D3H41_07710 IPR001905 Ammonium transporter D3H41_07715 IPR029035 DHS-like NAD/FAD-binding domain superfamily D3H41_07715 IPR003000 Sirtuin family D3H41_07715 IPR026591 Sirtuin, catalytic core small domain superfamily D3H41_07715 IPR027546 Sirtuin, class III D3H41_07715 IPR026590 Sirtuin family, catalytic core domain D3H41_07720 IPR006059 Bacterial extracellular solute-binding protein D3H41_07720 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein D3H41_07725 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein D3H41_07725 IPR006059 Bacterial extracellular solute-binding protein D3H41_07730 IPR000515 ABC transporter type 1, transmembrane domain MetI-like D3H41_07730 IPR035906 MetI-like superfamily D3H41_07735 IPR000515 ABC transporter type 1, transmembrane domain MetI-like D3H41_07735 IPR035906 MetI-like superfamily D3H41_07740 IPR008995 Molybdate/tungstate binding, C-terminal D3H41_07740 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_07740 IPR017871 ABC transporter, conserved site D3H41_07740 IPR003439 ABC transporter-like D3H41_07740 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit D3H41_07740 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA D3H41_07740 IPR003593 AAA+ ATPase domain D3H41_07740 IPR013611 Transport-associated OB, type 2 D3H41_07760 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal D3H41_07760 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3H41_07760 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase D3H41_07760 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type D3H41_07765 IPR006016 UspA D3H41_07770 IPR014710 RmlC-like jelly roll fold D3H41_07770 IPR018335 Transcription regulator HTH, Crp-type, conserved site D3H41_07770 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_07770 IPR012318 Crp-type HTH domain D3H41_07770 IPR000595 Cyclic nucleotide-binding domain D3H41_07770 IPR018490 Cyclic nucleotide-binding-like D3H41_07770 IPR036390 Winged helix DNA-binding domain superfamily D3H41_07785 IPR023214 HAD superfamily D3H41_07785 IPR023299 P-type ATPase, cytoplasmic domain N D3H41_07785 IPR018303 P-type ATPase, phosphorylation site D3H41_07785 IPR023298 P-type ATPase, transmembrane domain superfamily D3H41_07785 IPR036163 Heavy metal-associated domain superfamily D3H41_07785 IPR006121 Heavy metal-associated domain, HMA D3H41_07785 IPR017969 Heavy-metal-associated, conserved site D3H41_07785 IPR036412 HAD-like superfamily D3H41_07785 IPR001757 P-type ATPase D3H41_07785 IPR008250 P-type ATPase, A domain superfamily D3H41_07785 IPR027256 P-type ATPase, subfamily IB D3H41_07795 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal D3H41_07795 IPR004678 Cytochrome c oxidase cbb3-type, subunit III D3H41_07795 IPR008168 Cytochrome c, class IC D3H41_07795 IPR036909 Cytochrome c-like domain superfamily D3H41_07795 IPR009056 Cytochrome c-like domain D3H41_07795 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily D3H41_07810 IPR004677 Cytochrome c oxidase cbb3-type, subunit I D3H41_07810 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site D3H41_07810 IPR036927 Cytochrome c oxidase-like, subunit I superfamily D3H41_07810 IPR023616 Cytochrome c oxidase-like, subunit I domain D3H41_07810 IPR000883 Cytochrome c oxidase subunit I D3H41_07825 IPR001789 Signal transduction response regulator, receiver domain D3H41_07825 IPR004358 Signal transduction histidine kinase-related protein, C-terminal D3H41_07825 IPR029151 Periplasmic sensor-like domain superfamily D3H41_07825 IPR035965 PAS domain superfamily D3H41_07825 IPR015387 LuxQ, periplasmic D3H41_07825 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain D3H41_07825 IPR005467 Histidine kinase domain D3H41_07825 IPR003594 Histidine kinase/HSP90-like ATPase D3H41_07825 IPR011006 CheY-like superfamily D3H41_07825 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily D3H41_07825 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3H41_07890 IPR041685 AAA domain, group 15 D3H41_07890 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_08225 IPR009390 Macrodomain Ter protein, MatP D3H41_08225 IPR013321 Arc-type ribbon-helix-helix D3H41_08225 IPR035087 MatP, N-terminal D3H41_08225 IPR038339 MatP, N-terminal domain superfamily D3H41_08225 IPR035375 MatP, C-terminal ribbon-helix-helix domain D3H41_08230 IPR020568 Ribosomal protein S5 domain 2-type fold D3H41_08230 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D3H41_08230 IPR041699 Lon protease, AAA domain D3H41_08230 IPR008269 Peptidase S16, Lon proteolytic domain D3H41_08230 IPR027065 Lon protease D3H41_08235 IPR029069 HotDog domain superfamily D3H41_08235 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ D3H41_08235 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA D3H41_08240 IPR023200 Ribosome modulation factor domain superfamily D3H41_08240 IPR007040 Ribosome modulation factor D3H41_08260 IPR017244 Ribosomal RNA large subunit methyltransferase K/L D3H41_08260 IPR002052 DNA methylase, N-6 adenine-specific, conserved site D3H41_08260 IPR000241 Putative RNA methylase domain D3H41_08260 IPR019614 S-adenosylmethionine-dependent methyltransferase D3H41_08260 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3H41_08260 IPR004114 THUMP domain D3H41_08265 IPR009809 Cell division protein ZapC D3H41_08270 IPR013785 Aldolase-type TIM barrel D3H41_08270 IPR005720 Dihydroorotate dehydrogenase domain D3H41_08270 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 D3H41_08270 IPR005719 Dihydroorotate dehydrogenase, class 2 D3H41_08270 IPR001295 Dihydroorotate dehydrogenase, conserved site D3H41_08280 IPR007780 NAD-glutamate dehydrogenase, bacteria D3H41_08280 IPR028971 NAD-glutamate dehydrogenase D3H41_08280 IPR036291 NAD(P)-binding domain superfamily D3H41_08290 IPR027268 Peptidase M4/M1, CTD superfamily D3H41_08290 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold D3H41_08290 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily D3H41_08290 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal D3H41_08290 IPR012779 Peptidase M1, alanyl aminopeptidase D3H41_08290 IPR014782 Peptidase M1, membrane alanine aminopeptidase D3H41_08290 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily D3H41_08290 IPR042097 Aminopeptidase N-like , N-terminal D3H41_08290 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase D3H41_08300 IPR040573 Tail specific protease, N-terminal domain D3H41_08300 IPR001478 PDZ domain D3H41_08300 IPR020992 Tail specific protease, C-terminal D3H41_08300 IPR036034 PDZ superfamily D3H41_08300 IPR005151 Tail specific protease D3H41_08300 IPR029045 ClpP/crotonase-like domain superfamily D3H41_08300 IPR004447 C-terminal-processing peptidase S41A D3H41_08305 IPR035236 RNA chaperone ProQ, C-terminal D3H41_08305 IPR036442 ProQ/FinO domain superfamily D3H41_08305 IPR016103 ProQ/FinO domain D3H41_08305 IPR023529 RNA chaperone ProQ D3H41_08310 IPR029016 GAF-like domain superfamily D3H41_08310 IPR003018 GAF domain D3H41_08310 IPR000614 Free Met sulfoxide reductase conserved site D3H41_08315 IPR011527 ABC transporter type 1, transmembrane domain D3H41_08315 IPR003593 AAA+ ATPase domain D3H41_08315 IPR039421 Type I protein exporter D3H41_08315 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_08315 IPR011917 ABC transporter, lipid A export, MsbA D3H41_08315 IPR017871 ABC transporter, conserved site D3H41_08315 IPR036640 ABC transporter type 1, transmembrane domain superfamily D3H41_08315 IPR003439 ABC transporter-like D3H41_08320 IPR007498 Intermembrane transport protein PqiA-like D3H41_08320 IPR011031 Multihaem cytochrome D3H41_08320 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type D3H41_08325 IPR003399 Mce/MlaD D3H41_08330 IPR023545 rRNA small subunit methyltransferase F D3H41_08330 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain D3H41_08330 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal D3H41_08330 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site D3H41_08330 IPR023267 RNA (C5-cytosine) methyltransferase D3H41_08330 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3H41_08330 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type D3H41_08330 IPR011023 Nop2p D3H41_08350 IPR006219 DHAP synthase, class 1 D3H41_08350 IPR006218 DAHP synthetase I/KDSA D3H41_08350 IPR013785 Aldolase-type TIM barrel D3H41_08355 IPR007551 Protein of unknown function DUF520 D3H41_08355 IPR035571 UPF0234-like, C-terminal D3H41_08355 IPR035570 UPF0234, N-terminal D3H41_08355 IPR036183 YajQ-like superfamily D3H41_08360 IPR014777 Tetrapyrrole methylase, subdomain 1 D3H41_08360 IPR014776 Tetrapyrrole methylase, subdomain 2 D3H41_08360 IPR006366 Uroporphyrin-III C-methyltransferase D3H41_08360 IPR036291 NAD(P)-binding domain superfamily D3H41_08360 IPR037115 Sirohaem synthase, dimerisation domain superfamily D3H41_08360 IPR012409 Sirohaem synthase D3H41_08360 IPR019478 Sirohaem synthase, dimerisation domain D3H41_08360 IPR035996 Tetrapyrrole methylase superfamily D3H41_08360 IPR028281 Siroheme synthase, central domain D3H41_08360 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site D3H41_08360 IPR006367 Sirohaem synthase, N-terminal D3H41_08360 IPR000878 Tetrapyrrole methylase D3H41_08370 IPR018313 Solute-binding protein family 3, conserved site D3H41_08370 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter D3H41_08370 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF D3H41_08375 IPR035906 MetI-like superfamily D3H41_08375 IPR000515 ABC transporter type 1, transmembrane domain MetI-like D3H41_08375 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain D3H41_08380 IPR035906 MetI-like superfamily D3H41_08380 IPR000515 ABC transporter type 1, transmembrane domain MetI-like D3H41_08380 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain D3H41_08385 IPR003439 ABC transporter-like D3H41_08385 IPR003593 AAA+ ATPase domain D3H41_08385 IPR017871 ABC transporter, conserved site D3H41_08385 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_08385 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type D3H41_08390 IPR006214 Bax inhibitor 1-related D3H41_08405 IPR007453 Sulphur transfer protein DsrC/TusE D3H41_08405 IPR025526 DsrC-like domain superfamily D3H41_08405 IPR042072 DsrC-like protein, C-terminal domain D3H41_08410 IPR001792 Acylphosphatase-like domain D3H41_08410 IPR036046 Acylphosphatase-like domain superfamily D3H41_08410 IPR017968 Acylphosphatase, conserved site D3H41_08410 IPR020456 Acylphosphatase D3H41_08415 IPR029151 Periplasmic sensor-like domain superfamily D3H41_08415 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain D3H41_08415 IPR000727 Target SNARE coiled-coil homology domain D3H41_08415 IPR033479 Double Cache domain 1 D3H41_08415 IPR003660 HAMP domain D3H41_08420 IPR023542 rRNA large subunit methyltransferase I D3H41_08420 IPR041532 RlmI, PUA-like domain D3H41_08420 IPR002478 PUA domain D3H41_08420 IPR015947 PUA-like superfamily D3H41_08420 IPR036974 PUA domain superfamily D3H41_08420 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3H41_08420 IPR019614 S-adenosylmethionine-dependent methyltransferase D3H41_08435 IPR036737 OmpA-like domain superfamily D3H41_08435 IPR008722 Outer membrane porin F, N-terminal D3H41_08435 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel D3H41_08435 IPR006664 Outer membrane protein, bacterial D3H41_08435 IPR006665 OmpA-like domain D3H41_08435 IPR028974 TSP type-3 repeat D3H41_08435 IPR006690 Outer membrane protein, OmpA-like, conserved site D3H41_08450 IPR008722 Outer membrane porin F, N-terminal D3H41_08450 IPR028974 TSP type-3 repeat D3H41_08450 IPR006690 Outer membrane protein, OmpA-like, conserved site D3H41_08450 IPR006665 OmpA-like domain D3H41_08450 IPR006664 Outer membrane protein, bacterial D3H41_08450 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel D3H41_08450 IPR036737 OmpA-like domain superfamily D3H41_08460 IPR029787 Nucleotide cyclase D3H41_08460 IPR000160 GGDEF domain D3H41_08460 IPR029016 GAF-like domain superfamily D3H41_08460 IPR003018 GAF domain D3H41_08465 IPR029016 GAF-like domain superfamily D3H41_08465 IPR014757 Transcription regulator IclR, C-terminal D3H41_08465 IPR036390 Winged helix DNA-binding domain superfamily D3H41_08465 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_08465 IPR005471 Transcription regulator IclR, N-terminal D3H41_08475 IPR036812 NADP-dependent oxidoreductase domain superfamily D3H41_08475 IPR023210 NADP-dependent oxidoreductase domain D3H41_08475 IPR020471 Aldo/keto reductase D3H41_08475 IPR018170 Aldo/keto reductase, conserved site D3H41_08480 IPR036390 Winged helix DNA-binding domain superfamily D3H41_08480 IPR005119 LysR, substrate-binding D3H41_08480 IPR000847 Transcription regulator HTH, LysR D3H41_08480 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_08490 IPR005119 LysR, substrate-binding D3H41_08490 IPR000847 Transcription regulator HTH, LysR D3H41_08490 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_08490 IPR036390 Winged helix DNA-binding domain superfamily D3H41_08495 IPR011701 Major facilitator superfamily D3H41_08495 IPR020846 Major facilitator superfamily domain D3H41_08495 IPR036259 MFS transporter superfamily D3H41_08510 IPR037923 Transcription regulator HTH-like D3H41_08510 IPR009057 Homeobox-like domain superfamily D3H41_08510 IPR018062 HTH domain AraC-type, conserved site D3H41_08510 IPR020449 Transcription regulator HTH, AraC- type D3H41_08510 IPR018060 DNA binding HTH domain, AraC-type D3H41_08510 IPR003313 AraC-type arabinose-binding/dimerisation domain D3H41_08515 IPR036380 Isochorismatase-like superfamily D3H41_08515 IPR000868 Isochorismatase-like D3H41_08520 IPR001320 Ionotropic glutamate receptor D3H41_08520 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF D3H41_08520 IPR018313 Solute-binding protein family 3, conserved site D3H41_08520 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter D3H41_08530 IPR013149 Alcohol dehydrogenase, C-terminal D3H41_08530 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site D3H41_08530 IPR020843 Polyketide synthase, enoylreductase domain D3H41_08530 IPR036291 NAD(P)-binding domain superfamily D3H41_08530 IPR011032 GroES-like superfamily D3H41_08530 IPR013154 Alcohol dehydrogenase, N-terminal D3H41_08535 IPR000489 Pterin-binding domain D3H41_08535 IPR036724 Cobalamin-binding domain superfamily D3H41_08535 IPR011005 Dihydropteroate synthase-like D3H41_08535 IPR003726 Homocysteine-binding domain D3H41_08535 IPR036589 Homocysteine-binding domain superfamily D3H41_08535 IPR033706 Methionine synthase, B12-binding domain D3H41_08535 IPR011822 Cobalamin-dependent methionine synthase D3H41_08535 IPR036594 Methionine synthase domain D3H41_08535 IPR004223 Vitamin B12-dependent methionine synthase, activation domain D3H41_08535 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily D3H41_08535 IPR006158 Cobalamin (vitamin B12)-binding domain D3H41_08535 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain D3H41_08540 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_08540 IPR003439 ABC transporter-like D3H41_08540 IPR017871 ABC transporter, conserved site D3H41_08540 IPR003593 AAA+ ATPase domain D3H41_08540 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type D3H41_08545 IPR000515 ABC transporter type 1, transmembrane domain MetI-like D3H41_08545 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain D3H41_08545 IPR035906 MetI-like superfamily D3H41_08550 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF D3H41_08550 IPR018313 Solute-binding protein family 3, conserved site D3H41_08550 IPR001320 Ionotropic glutamate receptor D3H41_08550 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter D3H41_08560 IPR023614 Porin domain superfamily D3H41_08560 IPR001897 Porin, gammaproteobacterial D3H41_08560 IPR001702 Porin, Gram-negative type D3H41_08560 IPR013793 Porin, Gram-negative type, conserved site D3H41_08565 IPR000847 Transcription regulator HTH, LysR D3H41_08565 IPR036390 Winged helix DNA-binding domain superfamily D3H41_08565 IPR005119 LysR, substrate-binding D3H41_08565 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_08575 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 D3H41_08575 IPR001036 Acriflavin resistance protein D3H41_08575 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D3H41_08580 IPR005119 LysR, substrate-binding D3H41_08580 IPR000847 Transcription regulator HTH, LysR D3H41_08580 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_08580 IPR036390 Winged helix DNA-binding domain superfamily D3H41_08590 IPR036390 Winged helix DNA-binding domain superfamily D3H41_08590 IPR000847 Transcription regulator HTH, LysR D3H41_08590 IPR005119 LysR, substrate-binding D3H41_08590 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_08595 IPR001123 Amino acid exporter protein, LeuE-type D3H41_08605 IPR018317 Queuosine biosynthesis protein QueC D3H41_08605 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3H41_08610 IPR013785 Aldolase-type TIM barrel D3H41_08610 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria D3H41_08610 IPR007197 Radical SAM D3H41_08610 IPR024924 7-carboxy-7-deazaguanine synthase-like D3H41_08615 IPR006379 HAD-superfamily hydrolase, subfamily IIB D3H41_08615 IPR036412 HAD-like superfamily D3H41_08615 IPR000150 Cof family D3H41_08615 IPR023214 HAD superfamily D3H41_08625 IPR033116 Serine proteases, trypsin family, serine active site D3H41_08625 IPR001314 Peptidase S1A, chymotrypsin family D3H41_08625 IPR018114 Serine proteases, trypsin family, histidine active site D3H41_08625 IPR001254 Serine proteases, trypsin domain D3H41_08625 IPR009003 Peptidase S1, PA clan D3H41_08635 IPR020845 AMP-binding, conserved site D3H41_08635 IPR025110 AMP-binding enzyme, C-terminal domain D3H41_08635 IPR000873 AMP-dependent synthetase/ligase D3H41_08635 IPR042099 AMP-dependent synthetase-like superfamily D3H41_08635 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain D3H41_08640 IPR007400 PrpF protein D3H41_08640 IPR012709 2-methyl-aconitate isomerase PrpF D3H41_08645 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent D3H41_08645 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 D3H41_08645 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain D3H41_08645 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel D3H41_08645 IPR006249 Aconitase/Iron-responsive element-binding protein 2 D3H41_08645 IPR036008 Aconitase, iron-sulfur domain D3H41_08645 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain D3H41_08650 IPR016143 Citrate synthase-like, small alpha subdomain D3H41_08650 IPR016142 Citrate synthase-like, large alpha subdomain D3H41_08650 IPR011278 2-methylcitrate synthase/citrate synthase type I D3H41_08650 IPR024176 Citrate synthase, bacterial-type D3H41_08650 IPR019810 Citrate synthase active site D3H41_08650 IPR036969 Citrate synthase superfamily D3H41_08650 IPR002020 Citrate synthase D3H41_08655 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site D3H41_08655 IPR012695 2-methylisocitrate lyase D3H41_08655 IPR039556 ICL/PEPM domain D3H41_08655 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily D3H41_08655 IPR040442 Pyruvate kinase-like domain superfamily D3H41_08680 IPR002823 Protein of unknown function DUF112, transmembrane D3H41_08690 IPR002781 Transmembrane protein TauE-like D3H41_08695 IPR011852 TRAP transporter solute receptor, TAXI family D3H41_08700 IPR008898 YopD-like D3H41_08710 IPR011990 Tetratricopeptide-like helical domain superfamily D3H41_08710 IPR013026 Tetratricopeptide repeat-containing domain D3H41_08710 IPR011716 Tetratricopeptide TPR-3 D3H41_08710 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup D3H41_08710 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD D3H41_08715 IPR036139 Virulence-associated V antigen superfamily D3H41_08715 IPR005413 Low calcium response V antigen D3H41_08725 IPR022797 Type III secretion system regulator LcrR/Chaperone CesD2 D3H41_08725 IPR013405 Type III secretion system regulator, LcrR D3H41_08730 IPR042193 FHIPEP, domain 3 D3H41_08730 IPR042194 FHIPEP, domain 1 D3H41_08730 IPR042196 FHIPEP, domain 4 D3H41_08730 IPR001712 Type III secretion system FHIPEP D3H41_08730 IPR006302 Type III secretion protein HrcV D3H41_08730 IPR025505 FHIPEP conserved site D3H41_08750 IPR013351 Type III secretion system effector delivery regulator TyeA-related D3H41_08750 IPR015144 Type III secretion system effector delivery regulator TyeA D3H41_08750 IPR038347 TyeA superfamily D3H41_08760 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain D3H41_08760 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site D3H41_08760 IPR040627 T3SS EscN ATPase, C-terminal D3H41_08760 IPR003593 AAA+ ATPase domain D3H41_08760 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain D3H41_08760 IPR005714 ATPase, type III secretion system, FliI/YscN D3H41_08760 IPR013380 ATPase, type III secretion system, H+-transporting D3H41_08760 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_08775 IPR001543 Surface presentation of antigen (SpoA) D3H41_08775 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO D3H41_08775 IPR003283 Type III secretion system outer membrane, SpaO D3H41_08775 IPR036429 SpoA-like superfamily D3H41_08780 IPR005838 Type III secretion system inner membrane P protein D3H41_08780 IPR005773 Yop virulence translocation protein R D3H41_08785 IPR006306 Type III secretion protein HrpO D3H41_08785 IPR002191 Bacterial export protein family 3 D3H41_08790 IPR006304 Type III secretion protein SpaR/YscT D3H41_08790 IPR002010 Type III secretion system inner membrane R protein D3H41_08795 IPR029025 Type III secretion system substrate exporter, C-terminal D3H41_08795 IPR006135 Type III secretion system substrate exporter D3H41_08795 IPR006307 Type III exporter system, secretion apparatus protein BsaZ D3H41_08800 IPR018062 HTH domain AraC-type, conserved site D3H41_08800 IPR032783 AraC-type transcription regulator, ligand-binding domain D3H41_08800 IPR011051 RmlC-like cupin domain superfamily D3H41_08800 IPR014710 RmlC-like jelly roll fold D3H41_08800 IPR018060 DNA binding HTH domain, AraC-type D3H41_08800 IPR009057 Homeobox-like domain superfamily D3H41_08800 IPR020449 Transcription regulator HTH, AraC- type D3H41_08830 IPR003812 Fido domain D3H41_08830 IPR036597 Fido-like domain superfamily D3H41_08840 IPR012842 Type III secretion system HrpE/YscL D3H41_08840 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE D3H41_08850 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ D3H41_08850 IPR006182 Secretory protein YscJ/FliF D3H41_08855 IPR012670 Type III secretion system, YscI/HrpB D3H41_08865 IPR011990 Tetratricopeptide-like helical domain superfamily D3H41_08865 IPR013348 Type III secretion system YscG D3H41_08870 IPR021123 Type III secretion, needle-protein-like D3H41_08870 IPR037203 Type III secretion, needle-protein-like superfamily D3H41_08870 IPR011841 Type III secretion system, needle protein D3H41_08880 IPR032034 Yop protein translocation protein D, periplasmic domain D3H41_08880 IPR012843 Type III secretion system YscD/HrpQ D3H41_08880 IPR032030 YscD, cytoplasmic domain D3H41_08880 IPR000253 Forkhead-associated (FHA) domain D3H41_08880 IPR008984 SMAD/FHA domain superfamily D3H41_08900 IPR014710 RmlC-like jelly roll fold D3H41_08900 IPR018060 DNA binding HTH domain, AraC-type D3H41_08900 IPR009057 Homeobox-like domain superfamily D3H41_08900 IPR020449 Transcription regulator HTH, AraC- type D3H41_08900 IPR018062 HTH domain AraC-type, conserved site D3H41_08920 IPR016162 Aldehyde dehydrogenase, N-terminal D3H41_08920 IPR016163 Aldehyde dehydrogenase, C-terminal D3H41_08920 IPR016160 Aldehyde dehydrogenase, cysteine active site D3H41_08920 IPR029510 Aldehyde dehydrogenase, glutamic acid active site D3H41_08920 IPR015590 Aldehyde dehydrogenase domain D3H41_08920 IPR016161 Aldehyde/histidinol dehydrogenase D3H41_08925 IPR003593 AAA+ ATPase domain D3H41_08925 IPR003018 GAF domain D3H41_08925 IPR002197 DNA binding HTH domain, Fis-type D3H41_08925 IPR009057 Homeobox-like domain superfamily D3H41_08925 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_08925 IPR002078 RNA polymerase sigma factor 54 interaction domain D3H41_08925 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 D3H41_08925 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 D3H41_08925 IPR025944 Sigma-54 interaction domain, conserved site D3H41_08925 IPR029016 GAF-like domain superfamily D3H41_08940 IPR006114 6-phosphogluconate dehydrogenase, C-terminal D3H41_08940 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating D3H41_08940 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding D3H41_08940 IPR006184 6-phosphogluconate-binding site D3H41_08940 IPR036291 NAD(P)-binding domain superfamily D3H41_08940 IPR006183 6-phosphogluconate dehydrogenase D3H41_08940 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily D3H41_08940 IPR013328 6-phosphogluconate dehydrogenase, domain 2 D3H41_08945 IPR039104 6-Phosphogluconolactonase D3H41_08945 IPR037171 NagB/RpiA transferase-like D3H41_08945 IPR005900 6-phosphogluconolactonase, DevB-type D3H41_08945 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase D3H41_08950 IPR036291 NAD(P)-binding domain superfamily D3H41_08950 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding D3H41_08950 IPR019796 Glucose-6-phosphate dehydrogenase, active site D3H41_08950 IPR001282 Glucose-6-phosphate dehydrogenase D3H41_08950 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal D3H41_08955 IPR003313 AraC-type arabinose-binding/dimerisation domain D3H41_08955 IPR009057 Homeobox-like domain superfamily D3H41_08955 IPR037923 Transcription regulator HTH-like D3H41_08955 IPR018060 DNA binding HTH domain, AraC-type D3H41_08955 IPR018062 HTH domain AraC-type, conserved site D3H41_08960 IPR037066 TonB-dependent receptor, plug domain superfamily D3H41_08960 IPR000531 TonB-dependent receptor-like, beta-barrel D3H41_08960 IPR012910 TonB-dependent receptor, plug domain D3H41_08960 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D3H41_08960 IPR039423 TonB-dependent receptor-like D3H41_08960 IPR010105 TonB-dependent siderophore receptor D3H41_08965 IPR028141 Transcriptional regulator D3H41_08965 IPR011006 CheY-like superfamily D3H41_08965 IPR001789 Signal transduction response regulator, receiver domain D3H41_08965 IPR024187 Signal transduction response regulator, citrate/malate metabolism D3H41_08970 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3H41_08970 IPR005467 Histidine kinase domain D3H41_08970 IPR000014 PAS domain D3H41_08970 IPR035965 PAS domain superfamily D3H41_08970 IPR003594 Histidine kinase/HSP90-like ATPase D3H41_08970 IPR013767 PAS fold D3H41_08970 IPR039506 SpoOB, alpha-helical domain D3H41_08970 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB D3H41_08970 IPR004358 Signal transduction histidine kinase-related protein, C-terminal D3H41_08970 IPR029151 Periplasmic sensor-like domain superfamily D3H41_08970 IPR033463 Single cache domain 3 D3H41_08985 IPR039562 Membrane fusion protein, biotin-lipoyl like domain D3H41_09000 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_09000 IPR036390 Winged helix DNA-binding domain superfamily D3H41_09000 IPR000847 Transcription regulator HTH, LysR D3H41_09000 IPR005119 LysR, substrate-binding D3H41_09015 IPR029056 Ribokinase-like D3H41_09015 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase D3H41_09015 IPR023685 Pyridoxal kinase PdxY D3H41_09015 IPR004625 Pyridoxine kinase D3H41_09020 IPR022518 Aspartate 4-decarboxylase D3H41_09020 IPR015424 Pyridoxal phosphate-dependent transferase D3H41_09020 IPR015421 Pyridoxal phosphate-dependent transferase, major domain D3H41_09020 IPR004839 Aminotransferase, class I/classII D3H41_09020 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 D3H41_09020 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site D3H41_09025 IPR022457 Aspartate-alanine antiporter D3H41_09025 IPR006037 Regulator of K+ conductance, C-terminal D3H41_09025 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily D3H41_09025 IPR006512 YidE/YbjL duplication D3H41_09035 IPR006143 RND efflux pump, membrane fusion protein D3H41_09035 IPR039562 Membrane fusion protein, biotin-lipoyl like domain D3H41_09035 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA D3H41_09050 IPR029058 Alpha/Beta hydrolase fold D3H41_09050 IPR002018 Carboxylesterase, type B D3H41_09050 IPR019826 Carboxylesterase type B, active site D3H41_09055 IPR001736 Phospholipase D/Transphosphatidylase D3H41_09055 IPR030871 Cardiolipin synthase C D3H41_09055 IPR025202 Phospholipase D-like domain D3H41_09060 IPR000184 Bacterial surface antigen (D15) D3H41_09060 IPR035243 TamA, POTRA domain 1 D3H41_09060 IPR039910 Surface antigen D15-like D3H41_09065 IPR022548 Domain of unknown function DUF2846 D3H41_09065 IPR016596 Protein of unknown function UCP012335 D3H41_09070 IPR001123 Amino acid exporter protein, LeuE-type D3H41_09070 IPR004778 Homoserine/Threonine efflux protein D3H41_09075 IPR004778 Homoserine/Threonine efflux protein D3H41_09075 IPR001123 Amino acid exporter protein, LeuE-type D3H41_09080 IPR009874 Protein of unknown function DUF1428 D3H41_09080 IPR011008 Dimeric alpha-beta barrel D3H41_09100 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily D3H41_09100 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain D3H41_09100 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal D3H41_09100 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria D3H41_09100 IPR003156 DHHA1 domain D3H41_09100 IPR009000 Translation protein, beta-barrel domain superfamily D3H41_09100 IPR012947 Threonyl/alanyl tRNA synthetase, SAD D3H41_09100 IPR002318 Alanine-tRNA ligase, class IIc D3H41_09100 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily D3H41_09105 IPR000182 GNAT domain D3H41_09105 IPR016181 Acyl-CoA N-acyltransferase D3H41_09110 IPR024688 Maltose/galactoside acetyltransferase D3H41_09110 IPR001451 Hexapeptide repeat D3H41_09110 IPR018357 Hexapeptide transferase, conserved site D3H41_09110 IPR011004 Trimeric LpxA-like superfamily D3H41_09175 IPR012337 Ribonuclease H-like superfamily D3H41_09175 IPR001584 Integrase, catalytic core D3H41_09175 IPR036397 Ribonuclease H superfamily D3H41_09175 IPR025948 HTH-like domain D3H41_09190 IPR013988 PhnA protein, C-terminal D3H41_09190 IPR004624 PhnA protein D3H41_09190 IPR013987 PhnA protein, N-terminal D3H41_09380 IPR006674 HD domain D3H41_09380 IPR026875 Phosphohydrolase-associated domain D3H41_09380 IPR006261 dNTP triphosphohydrolase D3H41_09380 IPR023023 dNTP triphosphohydrolase, type 2 D3H41_09380 IPR003607 HD/PDEase domain D3H41_09590 IPR016181 Acyl-CoA N-acyltransferase D3H41_09590 IPR000182 GNAT domain D3H41_09590 IPR023072 Acetyltransferase, YpeA D3H41_09655 IPR013216 Methyltransferase type 11 D3H41_09655 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3H41_09655 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC D3H41_09805 IPR007553 Domain of unknown function DUF523 D3H41_09810 IPR000182 GNAT domain D3H41_09810 IPR016181 Acyl-CoA N-acyltransferase D3H41_09870 IPR021127 CRISPR-associated endonuclease Cas2 D3H41_09870 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 D3H41_09975 IPR004107 Integrase, SAM-like, N-terminal D3H41_09975 IPR010998 Integrase/recombinase, N-terminal D3H41_09975 IPR011946 Integrase, integron-type D3H41_09975 IPR013762 Integrase-like, catalytic domain superfamily D3H41_09975 IPR011010 DNA breaking-rejoining enzyme, catalytic core D3H41_09975 IPR002104 Integrase, catalytic domain D3H41_10100 IPR005564 Major capsid protein GpE D3H41_10110 IPR029045 ClpP/crotonase-like domain superfamily D3H41_10110 IPR002825 Peptidase S49, serine-peptidase prokaryotes D3H41_10110 IPR002810 NfeD-like, C-terminal domain D3H41_10140 IPR023346 Lysozyme-like domain superfamily D3H41_10140 IPR002196 Glycoside hydrolase, family 24 D3H41_10140 IPR034690 Endolysin T4 type D3H41_10175 IPR010373 Protein of unknown function DUF968 D3H41_10175 IPR003615 HNH nuclease D3H41_10195 IPR005021 Terminase large subunit, Lambdalikevirus-type D3H41_10195 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_10195 IPR036390 Winged helix DNA-binding domain superfamily D3H41_10225 IPR001387 Cro/C1-type helix-turn-helix domain D3H41_10225 IPR039418 LexA-like D3H41_10225 IPR015927 Peptidase S24/S26A/S26B/S26C D3H41_10225 IPR010982 Lambda repressor-like, DNA-binding domain superfamily D3H41_10225 IPR036286 LexA/Signal peptidase-like superfamily D3H41_10245 IPR019276 Protein of unkown function DUF2303 D3H41_10265 IPR002104 Integrase, catalytic domain D3H41_10265 IPR022000 Min27-like integrase, DNA-binding domain D3H41_10265 IPR010998 Integrase/recombinase, N-terminal D3H41_10265 IPR013762 Integrase-like, catalytic domain superfamily D3H41_10265 IPR011010 DNA breaking-rejoining enzyme, catalytic core D3H41_10270 IPR010767 Campylobacter phage CGC-2007, Cje0229 D3H41_10285 IPR036670 SecA, preprotein cross-linking domain superfamily D3H41_10285 IPR036266 SecA, Wing/Scaffold superfamily D3H41_10285 IPR011116 SecA Wing/Scaffold D3H41_10285 IPR011130 SecA, preprotein cross-linking domain D3H41_10285 IPR014018 SecA motor DEAD D3H41_10285 IPR004027 SEC-C motif D3H41_10285 IPR011115 SecA DEAD-like, N-terminal D3H41_10285 IPR000185 Protein translocase subunit SecA D3H41_10285 IPR020937 SecA conserved site D3H41_10285 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_10300 IPR000182 GNAT domain D3H41_10300 IPR016181 Acyl-CoA N-acyltransferase D3H41_10305 IPR009057 Homeobox-like domain superfamily D3H41_10305 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 D3H41_10305 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 D3H41_10305 IPR002912 ACT domain D3H41_10305 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_10305 IPR025944 Sigma-54 interaction domain, conserved site D3H41_10305 IPR002078 RNA polymerase sigma factor 54 interaction domain D3H41_10305 IPR000014 PAS domain D3H41_10305 IPR035965 PAS domain superfamily D3H41_10305 IPR003593 AAA+ ATPase domain D3H41_10305 IPR030828 TyrR family, helix-turn-helix domain D3H41_10310 IPR006507 Uncharacterised protein family UPF0283 D3H41_10310 IPR021147 Protein of unknown function DUF697 D3H41_10315 IPR007413 Protein of unknown function DUF463, YcjX-like protein D3H41_10335 IPR015890 Chorismate-utilising enzyme, C-terminal D3H41_10335 IPR005802 Aminodeoxychorismate synthase, component I D3H41_10335 IPR006805 Anthranilate synthase component I, N-terminal D3H41_10335 IPR019999 Anthranilate synthase component I-like D3H41_10335 IPR005801 ADC synthase D3H41_10340 IPR001789 Signal transduction response regulator, receiver domain D3H41_10340 IPR011006 CheY-like superfamily D3H41_10340 IPR015387 LuxQ, periplasmic D3H41_10340 IPR003594 Histidine kinase/HSP90-like ATPase D3H41_10340 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3H41_10340 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily D3H41_10340 IPR035965 PAS domain superfamily D3H41_10340 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain D3H41_10340 IPR029151 Periplasmic sensor-like domain superfamily D3H41_10340 IPR005467 Histidine kinase domain D3H41_10340 IPR004358 Signal transduction histidine kinase-related protein, C-terminal D3H41_10350 IPR023735 Uncharacterised nudix hydrolase NudL D3H41_10350 IPR000086 NUDIX hydrolase domain D3H41_10350 IPR000059 NUDIX hydrolase, NudL, conserved site D3H41_10350 IPR015797 NUDIX hydrolase-like domain superfamily D3H41_10355 IPR018227 Amino acid/polyamine transporter 2 D3H41_10355 IPR004694 Hydroxy amino acid transporter D3H41_10360 IPR005131 Serine dehydratase beta chain D3H41_10360 IPR005130 Serine dehydratase-like, alpha subunit D3H41_10360 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form D3H41_10360 IPR029009 Allosteric substrate binding domain superfamily D3H41_10365 IPR036046 Acylphosphatase-like domain superfamily D3H41_10365 IPR007024 BLUF domain D3H41_10365 IPR035919 EAL domain superfamily D3H41_10365 IPR001633 EAL domain D3H41_10375 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family D3H41_10375 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily D3H41_10380 IPR004090 Chemotaxis methyl-accepting receptor D3H41_10380 IPR033480 Single Cache domain 2 D3H41_10380 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain D3H41_10380 IPR003660 HAMP domain D3H41_10385 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) D3H41_10385 IPR006195 Aminoacyl-tRNA synthetase, class II D3H41_10385 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type D3H41_10385 IPR004522 Asparagine-tRNA ligase D3H41_10385 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb D3H41_10385 IPR012340 Nucleic acid-binding, OB-fold D3H41_10395 IPR036390 Winged helix DNA-binding domain superfamily D3H41_10395 IPR004839 Aminotransferase, class I/classII D3H41_10395 IPR015424 Pyridoxal phosphate-dependent transferase D3H41_10395 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 D3H41_10395 IPR000524 Transcription regulator HTH, GntR D3H41_10395 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_10395 IPR015421 Pyridoxal phosphate-dependent transferase, major domain D3H41_10410 IPR015421 Pyridoxal phosphate-dependent transferase, major domain D3H41_10410 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 D3H41_10410 IPR015424 Pyridoxal phosphate-dependent transferase D3H41_10410 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site D3H41_10410 IPR000796 Aspartate/other aminotransferase D3H41_10410 IPR004839 Aminotransferase, class I/classII D3H41_10430 IPR003660 HAMP domain D3H41_10430 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain D3H41_10435 IPR018093 BCCT transporter, conserved site D3H41_10435 IPR000060 BCCT transporter family D3H41_10445 IPR000792 Transcription regulator LuxR, C-terminal D3H41_10445 IPR001789 Signal transduction response regulator, receiver domain D3H41_10445 IPR016032 Signal transduction response regulator, C-terminal effector D3H41_10445 IPR011006 CheY-like superfamily D3H41_10450 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain D3H41_10450 IPR017171 Signal transduction histidine kinase, MctS D3H41_10450 IPR003594 Histidine kinase/HSP90-like ATPase D3H41_10450 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3H41_10450 IPR033480 Single Cache domain 2 D3H41_10455 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit D3H41_10455 IPR004681 TRAP transporter large membrane protein DctM D3H41_10465 IPR041722 Alpha-keto acid binding periplasmic protein D3H41_10465 IPR018389 TRAP transporter solute receptor DctP/TeaA D3H41_10465 IPR038404 TRAP transporter solute receptor DctP superfamily D3H41_10465 IPR026289 Solute binding protein, TakP-like D3H41_10480 IPR001279 Metallo-beta-lactamase D3H41_10480 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like D3H41_10485 IPR006311 Twin-arginine translocation pathway, signal sequence D3H41_10485 IPR010275 Protein of unknown function DUF882 D3H41_10485 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily D3H41_10490 IPR038063 L,D-transpeptidase catalytic domain-like D3H41_10490 IPR002477 Peptidoglycan binding-like D3H41_10490 IPR005490 L,D-transpeptidase catalytic domain D3H41_10490 IPR036365 PGBD-like superfamily D3H41_10515 IPR000926 GTP cyclohydrolase II, RibA D3H41_10515 IPR032677 GTP cyclohydrolase II D3H41_10515 IPR036144 RibA-like superfamily D3H41_10525 IPR011990 Tetratricopeptide-like helical domain superfamily D3H41_10525 IPR013026 Tetratricopeptide repeat-containing domain D3H41_10525 IPR017565 Formate-dependent nitrite reductase complex, subunit NrfF D3H41_10525 IPR005616 CcmH/CycL/Ccl2/NrfF family D3H41_10525 IPR019734 Tetratricopeptide repeat D3H41_10525 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily D3H41_10530 IPR036249 Thioredoxin-like superfamily D3H41_10530 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE D3H41_10530 IPR013766 Thioredoxin domain D3H41_10530 IPR017937 Thioredoxin, conserved site D3H41_10530 IPR013740 Redoxin D3H41_10535 IPR017563 Cytochrome c nitrate reductase biogenesis protein NrfE D3H41_10535 IPR003570 Cytochrome c-type biogenesis protein NrfE D3H41_10535 IPR003568 Cytochrome c-type biogenesis protein CcmF D3H41_10535 IPR003567 Cytochrome c-type biogenesis protein D3H41_10535 IPR002541 Cytochrome c assembly protein D3H41_10535 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal D3H41_10540 IPR005614 NrfD family D3H41_10540 IPR017566 NrfD D3H41_10545 IPR006311 Twin-arginine translocation pathway, signal sequence D3H41_10545 IPR017567 Cytochrome c nitrite reductase, Fe-S protein D3H41_10545 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site D3H41_10545 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain D3H41_10555 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit D3H41_10555 IPR036280 Multiheme cytochrome superfamily D3H41_10555 IPR011031 Multihaem cytochrome D3H41_10555 IPR003321 Cytochrome c552 D3H41_10570 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat D3H41_10570 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta D3H41_10570 IPR005743 DNA gyrase, subunit A D3H41_10570 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily D3H41_10570 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal D3H41_10570 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal D3H41_10570 IPR013760 DNA topoisomerase, type IIA-like domain superfamily D3H41_10575 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3H41_10575 IPR010233 Ubiquinone biosynthesis O-methyltransferase D3H41_10585 IPR005144 ATP-cone domain D3H41_10585 IPR000788 Ribonucleotide reductase large subunit, C-terminal D3H41_10585 IPR013509 Ribonucleotide reductase large subunit, N-terminal D3H41_10585 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal D3H41_10585 IPR039718 Ribonucleoside-diphosphate reductase large subunit D3H41_10585 IPR013346 Ribonucleotide reductase, class I , alpha subunit D3H41_10590 IPR009078 Ferritin-like superfamily D3H41_10590 IPR012348 Ribonucleotide reductase-like D3H41_10590 IPR000358 Ribonucleotide reductase small subunit family D3H41_10590 IPR030475 Ribonucleotide reductase small subunit, acitve site D3H41_10590 IPR033909 Ribonucleotide reductase small subunit D3H41_10600 IPR001453 MoaB/Mog domain D3H41_10600 IPR036425 MoaB/Mog-like domain superfamily D3H41_10600 IPR036653 CinA-like, C-terminal D3H41_10600 IPR008135 Competence-induced protein CinA D3H41_10615 IPR029066 PLP-binding barrel D3H41_10615 IPR005730 Carboxynorspermidine decarboxylase D3H41_10615 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal D3H41_10615 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal D3H41_10620 IPR036291 NAD(P)-binding domain superfamily D3H41_10620 IPR032095 Saccharopine dehydrogenase, C-terminal D3H41_10620 IPR005097 Saccharopine dehydrogenase, NADP binding domain D3H41_10625 IPR015421 Pyridoxal phosphate-dependent transferase, major domain D3H41_10625 IPR015424 Pyridoxal phosphate-dependent transferase D3H41_10625 IPR005814 Aminotransferase class-III D3H41_10625 IPR004637 2,4-diaminobutyrate 4-transaminase D3H41_10625 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 D3H41_10650 IPR000462 CDP-alcohol phosphatidyltransferase D3H41_10650 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial D3H41_10650 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase D3H41_10655 IPR000305 GIY-YIG endonuclease D3H41_10655 IPR001943 UVR domain D3H41_10655 IPR035901 GIY-YIG endonuclease superfamily D3H41_10655 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 D3H41_10655 IPR010994 RuvA domain 2-like D3H41_10655 IPR036876 UVR domain superfamily D3H41_10655 IPR038476 UvrC homology region 2 superfamily D3H41_10655 IPR001162 UvrC family homology region D3H41_10655 IPR004791 UvrABC system, subunit C D3H41_10660 IPR016032 Signal transduction response regulator, C-terminal effector D3H41_10660 IPR001789 Signal transduction response regulator, receiver domain D3H41_10660 IPR000792 Transcription regulator LuxR, C-terminal D3H41_10660 IPR011006 CheY-like superfamily D3H41_10665 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain D3H41_10665 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain D3H41_10665 IPR017964 DNA-directed DNA polymerase, family B, conserved site D3H41_10665 IPR006172 DNA-directed DNA polymerase, family B D3H41_10665 IPR036397 Ribonuclease H superfamily D3H41_10665 IPR012337 Ribonuclease H-like superfamily D3H41_10665 IPR023211 DNA polymerase, palm domain superfamily D3H41_10665 IPR042087 DNA polymerase family B, C-terminal domain D3H41_10675 IPR014722 Ribosomal protein L2, domain 2 D3H41_10675 IPR013185 Translation elongation factor, KOW-like D3H41_10675 IPR008991 Translation protein SH3-like domain superfamily D3H41_10675 IPR013852 Translation elongation factor P/YeiP, conserved site D3H41_10675 IPR001059 Translation elongation factor P/YeiP, central D3H41_10675 IPR015365 Elongation factor P, C-terminal D3H41_10675 IPR012340 Nucleic acid-binding, OB-fold D3H41_10675 IPR011897 Translation elongation factor P-like, YeiP D3H41_10675 IPR020599 Translation elongation factor P/YeiP D3H41_10680 IPR036763 Putative dsDNA mimic superfamily D3H41_10680 IPR007376 dsDNA mimic, putative D3H41_10685 IPR006145 Pseudouridine synthase, RsuA/RluA D3H41_10685 IPR020103 Pseudouridine synthase, catalytic domain superfamily D3H41_10685 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site D3H41_10685 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain D3H41_10685 IPR002942 RNA-binding S4 domain D3H41_10685 IPR036986 RNA-binding S4 domain superfamily D3H41_10685 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F D3H41_10695 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily D3H41_10695 IPR006070 YrdC-like domain D3H41_10700 IPR003141 Polymerase/histidinol phosphatase, N-terminal D3H41_10700 IPR004013 PHP domain D3H41_10700 IPR016195 Polymerase/histidinol phosphatase-like D3H41_10705 IPR012639 Tryptophan operon leader peptide D3H41_10710 IPR006805 Anthranilate synthase component I, N-terminal D3H41_10710 IPR019999 Anthranilate synthase component I-like D3H41_10710 IPR005801 ADC synthase D3H41_10710 IPR015890 Chorismate-utilising enzyme, C-terminal D3H41_10710 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial D3H41_10715 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain D3H41_10715 IPR017926 Glutamine amidotransferase D3H41_10715 IPR029062 Class I glutamine amidotransferase-like D3H41_10720 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily D3H41_10720 IPR017459 Glycosyl transferase family 3, N-terminal domain D3H41_10720 IPR000312 Glycosyl transferase, family 3 D3H41_10720 IPR005940 Anthranilate phosphoribosyl transferase D3H41_10720 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily D3H41_10725 IPR011060 Ribulose-phosphate binding barrel D3H41_10725 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) D3H41_10725 IPR001468 Indole-3-glycerol phosphate synthase, conserved site D3H41_10725 IPR013798 Indole-3-glycerol phosphate synthase D3H41_10725 IPR013785 Aldolase-type TIM barrel D3H41_10730 IPR023026 Tryptophan synthase beta chain/beta chain-like D3H41_10730 IPR006654 Tryptophan synthase, beta chain D3H41_10730 IPR001926 Pyridoxal-phosphate dependent enzyme D3H41_10730 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme D3H41_10730 IPR006653 Tryptophan synthase, beta chain, conserved site D3H41_10735 IPR011060 Ribulose-phosphate binding barrel D3H41_10735 IPR018204 Tryptophan synthase, alpha chain, active site D3H41_10735 IPR002028 Tryptophan synthase, alpha chain D3H41_10735 IPR013785 Aldolase-type TIM barrel D3H41_10740 IPR036390 Winged helix DNA-binding domain superfamily D3H41_10740 IPR018490 Cyclic nucleotide-binding-like D3H41_10740 IPR000595 Cyclic nucleotide-binding domain D3H41_10740 IPR012318 Crp-type HTH domain D3H41_10740 IPR014710 RmlC-like jelly roll fold D3H41_10740 IPR018335 Transcription regulator HTH, Crp-type, conserved site D3H41_10740 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_10745 IPR000873 AMP-dependent synthetase/ligase D3H41_10745 IPR025110 AMP-binding enzyme, C-terminal domain D3H41_10745 IPR042099 AMP-dependent synthetase-like superfamily D3H41_10745 IPR020845 AMP-binding, conserved site D3H41_10745 IPR020459 AMP-binding D3H41_10755 IPR018107 Sodium:dicarboxylate symporter, conserved site D3H41_10755 IPR001991 Sodium:dicarboxylate symporter D3H41_10755 IPR023954 C4-dicarboxylate transport protein D3H41_10755 IPR036458 Sodium:dicarboxylate symporter superfamily D3H41_10760 IPR035304 Acyl homoserine lactone synthase D3H41_10765 IPR001789 Signal transduction response regulator, receiver domain D3H41_10765 IPR004358 Signal transduction histidine kinase-related protein, C-terminal D3H41_10765 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily D3H41_10765 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain D3H41_10765 IPR005467 Histidine kinase domain D3H41_10765 IPR003594 Histidine kinase/HSP90-like ATPase D3H41_10765 IPR011006 CheY-like superfamily D3H41_10765 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3H41_10775 IPR006008 Intracellular septation protein A D3H41_10780 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase D3H41_10780 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain D3H41_10780 IPR029069 HotDog domain superfamily D3H41_10780 IPR006683 Thioesterase domain D3H41_10785 IPR011008 Dimeric alpha-beta barrel D3H41_10785 IPR005545 YCII-related D3H41_10795 IPR038071 UROD/MetE-like superfamily D3H41_10795 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal D3H41_10795 IPR006276 Cobalamin-independent methionine synthase D3H41_10795 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal D3H41_10800 IPR005119 LysR, substrate-binding D3H41_10800 IPR000847 Transcription regulator HTH, LysR D3H41_10800 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_10800 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain D3H41_10800 IPR036390 Winged helix DNA-binding domain superfamily D3H41_10815 IPR035919 EAL domain superfamily D3H41_10815 IPR013655 PAS fold-3 D3H41_10815 IPR013656 PAS fold-4 D3H41_10815 IPR035965 PAS domain superfamily D3H41_10815 IPR000700 PAS-associated, C-terminal D3H41_10815 IPR000014 PAS domain D3H41_10815 IPR001610 PAC motif D3H41_10815 IPR001633 EAL domain D3H41_10815 IPR000160 GGDEF domain D3H41_10815 IPR029787 Nucleotide cyclase D3H41_10820 IPR006638 Elp3/MiaB/NifB D3H41_10820 IPR020612 Methylthiotransferase, conserved site D3H41_10820 IPR007197 Radical SAM D3H41_10820 IPR023404 Radical SAM, alpha/beta horseshoe D3H41_10820 IPR022946 Uncharacterised protein family UPF0313 D3H41_10820 IPR024560 Uncharacterised protein family UPF0313, C-terminal D3H41_10820 IPR013704 Uncharacterised protein family UPF0313, N-terminal D3H41_10840 IPR003342 Glycosyl transferase family 39/83 D3H41_10840 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase D3H41_10845 IPR029044 Nucleotide-diphospho-sugar transferases D3H41_10845 IPR001173 Glycosyltransferase 2-like D3H41_10850 IPR011006 CheY-like superfamily D3H41_10850 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_10850 IPR039420 Transcriptional regulatory protein WalR-like D3H41_10850 IPR001789 Signal transduction response regulator, receiver domain D3H41_10850 IPR016032 Signal transduction response regulator, C-terminal effector D3H41_10850 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response D3H41_10850 IPR001867 OmpR/PhoB-type DNA-binding domain D3H41_10855 IPR003594 Histidine kinase/HSP90-like ATPase D3H41_10855 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily D3H41_10855 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain D3H41_10855 IPR005467 Histidine kinase domain D3H41_10855 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3H41_10855 IPR003660 HAMP domain D3H41_10855 IPR004358 Signal transduction histidine kinase-related protein, C-terminal D3H41_10875 IPR036390 Winged helix DNA-binding domain superfamily D3H41_10875 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_10875 IPR000847 Transcription regulator HTH, LysR D3H41_10875 IPR005119 LysR, substrate-binding D3H41_10880 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain D3H41_10880 IPR005694 Efflux pump membrane protein D3H41_10880 IPR030196 Multidrug resistance protein MdtN D3H41_10890 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal D3H41_10890 IPR006276 Cobalamin-independent methionine synthase D3H41_10890 IPR038071 UROD/MetE-like superfamily D3H41_10890 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal D3H41_10910 IPR017871 ABC transporter, conserved site D3H41_10910 IPR003593 AAA+ ATPase domain D3H41_10910 IPR003838 ABC transporter permease protein domain D3H41_10910 IPR003439 ABC transporter-like D3H41_10910 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_10910 IPR025857 MacB-like periplasmic core domain D3H41_10910 IPR017911 ABC transporter, macrolide export, ATP-binding domain D3H41_10915 IPR017871 ABC transporter, conserved site D3H41_10915 IPR017911 ABC transporter, macrolide export, ATP-binding domain D3H41_10915 IPR025857 MacB-like periplasmic core domain D3H41_10915 IPR003838 ABC transporter permease protein domain D3H41_10915 IPR003439 ABC transporter-like D3H41_10915 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_10915 IPR003593 AAA+ ATPase domain D3H41_10920 IPR003593 AAA+ ATPase domain D3H41_10920 IPR003838 ABC transporter permease protein domain D3H41_10920 IPR003439 ABC transporter-like D3H41_10920 IPR017911 ABC transporter, macrolide export, ATP-binding domain D3H41_10920 IPR025857 MacB-like periplasmic core domain D3H41_10920 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_10920 IPR017871 ABC transporter, conserved site D3H41_10930 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain D3H41_10930 IPR030190 Macrolide export protein MacA D3H41_10930 IPR006143 RND efflux pump, membrane fusion protein D3H41_10950 IPR005746 Thioredoxin D3H41_10950 IPR036249 Thioredoxin-like superfamily D3H41_10950 IPR017937 Thioredoxin, conserved site D3H41_10950 IPR013766 Thioredoxin domain D3H41_10965 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_10965 IPR000792 Transcription regulator LuxR, C-terminal D3H41_10965 IPR011006 CheY-like superfamily D3H41_10965 IPR001789 Signal transduction response regulator, receiver domain D3H41_10970 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain D3H41_10970 IPR004358 Signal transduction histidine kinase-related protein, C-terminal D3H41_10970 IPR005467 Histidine kinase domain D3H41_10970 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3H41_10970 IPR003594 Histidine kinase/HSP90-like ATPase D3H41_10970 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily D3H41_11010 IPR003834 Cytochrome C biogenesis protein, transmembrane domain D3H41_11010 IPR035671 DsbD gamma D3H41_11010 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily D3H41_11010 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain D3H41_11010 IPR036249 Thioredoxin-like superfamily D3H41_11010 IPR017937 Thioredoxin, conserved site D3H41_11010 IPR013766 Thioredoxin domain D3H41_11010 IPR022910 Thiol:disulphide interchange protein DsbD D3H41_11015 IPR013766 Thioredoxin domain D3H41_11015 IPR017937 Thioredoxin, conserved site D3H41_11015 IPR036249 Thioredoxin-like superfamily D3H41_11015 IPR005746 Thioredoxin D3H41_11060 IPR030190 Macrolide export protein MacA D3H41_11060 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain D3H41_11060 IPR006143 RND efflux pump, membrane fusion protein D3H41_11080 IPR013766 Thioredoxin domain D3H41_11080 IPR017937 Thioredoxin, conserved site D3H41_11080 IPR036249 Thioredoxin-like superfamily D3H41_11080 IPR005746 Thioredoxin D3H41_11085 IPR003834 Cytochrome C biogenesis protein, transmembrane domain D3H41_11085 IPR035671 DsbD gamma D3H41_11085 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain D3H41_11085 IPR022910 Thiol:disulphide interchange protein DsbD D3H41_11085 IPR036249 Thioredoxin-like superfamily D3H41_11085 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily D3H41_11085 IPR013766 Thioredoxin domain D3H41_11085 IPR017937 Thioredoxin, conserved site D3H41_11095 IPR011006 CheY-like superfamily D3H41_11095 IPR001789 Signal transduction response regulator, receiver domain D3H41_11095 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_11095 IPR000792 Transcription regulator LuxR, C-terminal D3H41_11100 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3H41_11100 IPR004358 Signal transduction histidine kinase-related protein, C-terminal D3H41_11100 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily D3H41_11100 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain D3H41_11100 IPR005467 Histidine kinase domain D3H41_11100 IPR003594 Histidine kinase/HSP90-like ATPase D3H41_11105 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site D3H41_11105 IPR006311 Twin-arginine translocation pathway, signal sequence D3H41_11105 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain D3H41_11110 IPR005614 NrfD family D3H41_11115 IPR006657 Molybdopterin dinucleotide-binding domain D3H41_11115 IPR037946 Tetrathionate reductase subunit A, MopB domain D3H41_11115 IPR041929 Tetrathionate reductase subunit A, N-terminal D3H41_11115 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain D3H41_11115 IPR009010 Aspartate decarboxylase-like domain superfamily D3H41_11115 IPR006656 Molybdopterin oxidoreductase D3H41_11120 IPR009056 Cytochrome c-like domain D3H41_11120 IPR024167 Cytochrome c4-like D3H41_11120 IPR036909 Cytochrome c-like domain superfamily D3H41_11125 IPR036909 Cytochrome c-like domain superfamily D3H41_11125 IPR009056 Cytochrome c-like domain D3H41_11130 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type D3H41_11130 IPR007498 Intermembrane transport protein PqiA-like D3H41_11135 IPR003399 Mce/MlaD D3H41_11155 IPR030678 Peptide/nickel binding protein, MppA-type D3H41_11155 IPR039424 Solute-binding protein family 5 D3H41_11155 IPR023765 Solute-binding protein family 5, conserved site D3H41_11155 IPR000914 Solute-binding protein family 5 domain D3H41_11160 IPR011060 Ribulose-phosphate binding barrel D3H41_11160 IPR001754 Orotidine 5'-phosphate decarboxylase domain D3H41_11160 IPR018089 Orotidine 5'-phosphate decarboxylase, active site D3H41_11160 IPR014732 Orotidine 5'-phosphate decarboxylase D3H41_11160 IPR013785 Aldolase-type TIM barrel D3H41_11165 IPR030865 Lipopolysaccharide assembly protein B D3H41_11165 IPR019734 Tetratricopeptide repeat D3H41_11165 IPR011990 Tetratricopeptide-like helical domain superfamily D3H41_11165 IPR013026 Tetratricopeptide repeat-containing domain D3H41_11165 IPR041166 LapB, rubredoxin metal binding domain D3H41_11170 IPR010445 Lipopolysaccharide assembly protein A domain D3H41_11170 IPR032906 Lipopolysaccharide assembly protein A D3H41_11175 IPR005685 Integration host factor, beta subunit D3H41_11175 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily D3H41_11175 IPR020816 Histone-like DNA-binding protein, conserved site D3H41_11175 IPR000119 Histone-like DNA-binding protein D3H41_11180 IPR012340 Nucleic acid-binding, OB-fold D3H41_11180 IPR022967 RNA-binding domain, S1 D3H41_11180 IPR000110 Ribosomal protein S1 D3H41_11180 IPR003029 S1 domain D3H41_11185 IPR011994 Cytidylate kinase domain D3H41_11185 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_11185 IPR003136 Cytidylate kinase D3H41_11190 IPR013703 Peptidase S49, N-terminal proteobacteria D3H41_11190 IPR029045 ClpP/crotonase-like domain superfamily D3H41_11190 IPR002142 Peptidase S49 D3H41_11195 IPR036291 NAD(P)-binding domain superfamily D3H41_11195 IPR020904 Short-chain dehydrogenase/reductase, conserved site D3H41_11195 IPR002347 Short-chain dehydrogenase/reductase SDR D3H41_11210 IPR004013 PHP domain D3H41_11210 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain D3H41_11210 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type D3H41_11210 IPR003141 Polymerase/histidinol phosphatase, N-terminal D3H41_11210 IPR004805 DNA polymerase III, alpha subunit D3H41_11210 IPR040982 DNA polymerase III alpha subunit finger domain D3H41_11210 IPR029460 DNA polymerase, helix-hairpin-helix motif D3H41_11210 IPR023073 DNA polymerase, error-prone D3H41_11215 IPR011006 CheY-like superfamily D3H41_11215 IPR002545 CheW-like domain D3H41_11215 IPR036061 CheW-like domain superfamily D3H41_11215 IPR024181 Chemotaxis response regulator CheV D3H41_11215 IPR001789 Signal transduction response regulator, receiver domain D3H41_11220 IPR036390 Winged helix DNA-binding domain superfamily D3H41_11220 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_11220 IPR000600 ROK family D3H41_11225 IPR001697 Pyruvate kinase D3H41_11225 IPR040442 Pyruvate kinase-like domain superfamily D3H41_11225 IPR011037 Pyruvate kinase-like, insert domain superfamily D3H41_11225 IPR018209 Pyruvate kinase, active site D3H41_11225 IPR015793 Pyruvate kinase, barrel D3H41_11225 IPR015795 Pyruvate kinase, C-terminal D3H41_11225 IPR036918 Pyruvate kinase, C-terminal domain superfamily D3H41_11225 IPR015806 Pyruvate kinase, insert domain superfamily D3H41_11225 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily D3H41_11230 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase D3H41_11230 IPR002641 Patatin-like phospholipase domain D3H41_11230 IPR037483 YjjU-like D3H41_11245 IPR000175 Sodium:neurotransmitter symporter D3H41_11245 IPR037272 Sodium:neurotransmitter symporter superfamily D3H41_11260 IPR013013 Phosphotransferase system, EIIC component, type 1 D3H41_11260 IPR036878 Glucose permease domain IIB D3H41_11260 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site D3H41_11260 IPR001996 Phosphotransferase system, IIB component, type 1 D3H41_11260 IPR003352 Phosphotransferase system, EIIC D3H41_11260 IPR011299 PTS system glucose-specific IIBC component D3H41_11260 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component D3H41_11265 IPR015991 Uncharacterised hydrolase TatD-type D3H41_11265 IPR001130 TatD family D3H41_11265 IPR018228 Deoxyribonuclease, TatD-related, conserved site D3H41_11265 IPR032466 Metal-dependent hydrolase D3H41_11270 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal D3H41_11270 IPR015199 DNA polymerase III, delta subunit, C-terminal D3H41_11270 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_11275 IPR018095 Thymidylate kinase, conserved site D3H41_11275 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_11275 IPR039430 Thymidylate kinase-like domain D3H41_11275 IPR018094 Thymidylate kinase D3H41_11280 IPR003770 Endolytic murein transglycosylase D3H41_11285 IPR036038 Aminotransferase-like, PLP-dependent enzymes D3H41_11285 IPR018300 Aminotransferase, class IV, conserved site D3H41_11285 IPR017824 Aminodeoxychorismate lyase, class IV D3H41_11285 IPR001544 Aminotransferase class IV D3H41_11290 IPR000794 Beta-ketoacyl synthase D3H41_11290 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 D3H41_11290 IPR016039 Thiolase-like D3H41_11290 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain D3H41_11290 IPR014030 Beta-ketoacyl synthase, N-terminal D3H41_11290 IPR014031 Beta-ketoacyl synthase, C-terminal D3H41_11290 IPR018201 Beta-ketoacyl synthase, active site D3H41_11295 IPR003231 Acyl carrier protein (ACP) D3H41_11295 IPR009081 Phosphopantetheine binding ACP domain D3H41_11295 IPR006162 Phosphopantetheine attachment site D3H41_11295 IPR036736 ACP-like superfamily D3H41_11300 IPR036291 NAD(P)-binding domain superfamily D3H41_11300 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase D3H41_11300 IPR002347 Short-chain dehydrogenase/reductase SDR D3H41_11300 IPR020904 Short-chain dehydrogenase/reductase, conserved site D3H41_11305 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase D3H41_11305 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type D3H41_11305 IPR024925 Malonyl CoA-acyl carrier protein transacylase D3H41_11305 IPR014043 Acyl transferase D3H41_11305 IPR001227 Acyl transferase domain superfamily D3H41_11305 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding D3H41_11310 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D3H41_11310 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal D3H41_11310 IPR016039 Thiolase-like D3H41_11310 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 D3H41_11315 IPR003664 Fatty acid synthesis PlsX protein D3H41_11315 IPR012281 Phospholipid biosynthesis protein, PlsX-like D3H41_11320 IPR011332 Zinc-binding ribosomal protein D3H41_11320 IPR002677 Ribosomal protein L32p D3H41_11325 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria D3H41_11325 IPR003772 Large ribosomal RNA subunit accumulation protein YceD D3H41_11330 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein D3H41_11330 IPR029001 Inosine triphosphate pyrophosphatase-like D3H41_11335 IPR002942 RNA-binding S4 domain D3H41_11335 IPR006145 Pseudouridine synthase, RsuA/RluA D3H41_11335 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site D3H41_11335 IPR006225 Pseudouridine synthase, RluC/RluD D3H41_11335 IPR020103 Pseudouridine synthase, catalytic domain superfamily D3H41_11335 IPR036986 RNA-binding S4 domain superfamily D3H41_11345 IPR004659 Ribonuclease E/G D3H41_11345 IPR028878 Ribonuclease E D3H41_11345 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G D3H41_11345 IPR003029 S1 domain D3H41_11345 IPR021968 Polyribonucleotide phosphorylase C-terminal D3H41_11345 IPR022967 RNA-binding domain, S1 D3H41_11345 IPR012340 Nucleic acid-binding, OB-fold D3H41_11355 IPR001902 SLC26A/SulP transporter D3H41_11355 IPR011547 SLC26A/SulP transporter domain D3H41_11355 IPR018045 Sulphate anion transporter, conserved site D3H41_11355 IPR002645 STAS domain D3H41_11355 IPR036513 STAS domain superfamily D3H41_11360 IPR036196 Phosphotyrosine protein phosphatase I superfamily D3H41_11360 IPR023485 Phosphotyrosine protein phosphatase I D3H41_11360 IPR017867 Protein-tyrosine phosphatase, low molecular weight D3H41_11365 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain D3H41_11365 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR D3H41_11365 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_11375 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_11375 IPR006083 Phosphoribulokinase/uridine kinase D3H41_11375 IPR026008 Uridine kinase D3H41_11375 IPR000764 Uridine kinase-like D3H41_11380 IPR034904 Fe-S cluster assembly domain superfamily D3H41_11380 IPR019591 Mrp/NBP35 ATP-binding protein D3H41_11380 IPR000808 Mrp, conserved site D3H41_11380 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_11380 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 D3H41_11385 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding D3H41_11385 IPR002547 tRNA-binding domain D3H41_11385 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3H41_11385 IPR012340 Nucleic acid-binding, OB-fold D3H41_11385 IPR029038 Methionyl-tRNA synthetase, Zn-domain D3H41_11385 IPR033911 Methioninyl-tRNA synthetase core domain D3H41_11385 IPR014758 Methionyl-tRNA synthetase D3H41_11385 IPR015413 Methionyl/Leucyl tRNA synthetase D3H41_11385 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal D3H41_11385 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain D3H41_11385 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site D3H41_11385 IPR023458 Methionine-tRNA ligase, type 1 D3H41_11405 IPR028374 FadR, C-terminal domain D3H41_11405 IPR014178 Fatty acid response transcription factor FadR D3H41_11405 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_11405 IPR008920 Transcription regulator FadR/GntR, C-terminal D3H41_11405 IPR036390 Winged helix DNA-binding domain superfamily D3H41_11405 IPR000524 Transcription regulator HTH, GntR D3H41_11410 IPR004671 Na+/H+ antiporter NhaB D3H41_11415 IPR003752 Disulphide bond formation protein DsbB/BdbC D3H41_11415 IPR022920 Disulphide bond formation protein DsbB D3H41_11415 IPR023380 DsbB-like superfamily D3H41_11420 IPR011978 Uncharacterised protein family UPF0149 D3H41_11420 IPR004027 SEC-C motif D3H41_11420 IPR036255 YgfB-like superfamily D3H41_11425 IPR013785 Aldolase-type TIM barrel D3H41_11425 IPR035587 DUS-like, FMN-binding domain D3H41_11425 IPR032886 tRNA-dihydrouridine(16) synthase D3H41_11425 IPR042270 tRNA-dihydrouridine(16) synthase, C-terminal D3H41_11425 IPR018517 tRNA-dihydrouridine synthase, conserved site D3H41_11425 IPR001269 tRNA-dihydrouridine synthase D3H41_11430 IPR029787 Nucleotide cyclase D3H41_11430 IPR033424 Membrane-associated sensor domain D3H41_11430 IPR000160 GGDEF domain D3H41_11435 IPR017069 Maltodextrin glucosidase D3H41_11435 IPR014756 Immunoglobulin E-set D3H41_11435 IPR013780 Glycosyl hydrolase, all-beta D3H41_11435 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain D3H41_11435 IPR006047 Glycosyl hydrolase, family 13, catalytic domain D3H41_11435 IPR017853 Glycoside hydrolase superfamily D3H41_11440 IPR030946 Energy-coupling factor transporter ATP-binding protein EcfA2 D3H41_11440 IPR015856 ABC transporter, CbiO/EcfA subunit D3H41_11440 IPR017871 ABC transporter, conserved site D3H41_11440 IPR003439 ABC transporter-like D3H41_11440 IPR003593 AAA+ ATPase domain D3H41_11440 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_11445 IPR001851 ABC transporter, permease D3H41_11455 IPR007334 Uncharacterised protein family UPF0208 D3H41_11460 IPR023865 Aliphatic acid kinase, short-chain, conserved site D3H41_11460 IPR004372 Acetate/propionate kinase D3H41_11460 IPR000890 Aliphatic acid kinase, short-chain D3H41_11465 IPR016475 Phosphate acetyltransferase, bacteria D3H41_11465 IPR010766 DRTGG D3H41_11465 IPR042113 Phosphate acetyltransferase, domain 1 D3H41_11465 IPR042112 Phosphate acetyltransferase, domain 2 D3H41_11465 IPR002505 Phosphate acetyl/butaryl transferase D3H41_11465 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_11465 IPR004614 Phosphate acetyltransferase D3H41_11465 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily D3H41_11475 IPR040079 Glutathione Transferase family D3H41_11475 IPR036282 Glutathione S-transferase, C-terminal domain superfamily D3H41_11475 IPR004045 Glutathione S-transferase, N-terminal D3H41_11475 IPR016639 Glutathione S-transferase Omega/GSH D3H41_11475 IPR036249 Thioredoxin-like superfamily D3H41_11475 IPR010987 Glutathione S-transferase, C-terminal-like D3H41_11480 IPR003439 ABC transporter-like D3H41_11480 IPR003593 AAA+ ATPase domain D3H41_11480 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal D3H41_11480 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_11480 IPR017871 ABC transporter, conserved site D3H41_11485 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal D3H41_11485 IPR017871 ABC transporter, conserved site D3H41_11485 IPR003593 AAA+ ATPase domain D3H41_11485 IPR003439 ABC transporter-like D3H41_11485 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_11490 IPR035906 MetI-like superfamily D3H41_11490 IPR000515 ABC transporter type 1, transmembrane domain MetI-like D3H41_11490 IPR025966 Oligopeptide transport permease C-like, N-terminal domain D3H41_11495 IPR035906 MetI-like superfamily D3H41_11495 IPR000515 ABC transporter type 1, transmembrane domain MetI-like D3H41_11500 IPR023765 Solute-binding protein family 5, conserved site D3H41_11500 IPR039424 Solute-binding protein family 5 D3H41_11500 IPR030678 Peptide/nickel binding protein, MppA-type D3H41_11500 IPR000914 Solute-binding protein family 5 domain D3H41_11505 IPR003448 Molybdopterin biosynthesis MoaE D3H41_11505 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily D3H41_11510 IPR012675 Beta-grasp domain superfamily D3H41_11510 IPR003749 Sulfur carrier ThiS/MoaD-like D3H41_11510 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp D3H41_11515 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily D3H41_11515 IPR023045 Molybdenum cofactor biosynthesis C D3H41_11515 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain D3H41_11520 IPR008284 Molybdenum cofactor biosynthesis, conserved site D3H41_11520 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria D3H41_11520 IPR001453 MoaB/Mog domain D3H41_11520 IPR036425 MoaB/Mog-like domain superfamily D3H41_11520 IPR012245 Molybdenum cofactor biosynthesis protein MoaB D3H41_11525 IPR013785 Aldolase-type TIM barrel D3H41_11525 IPR006638 Elp3/MiaB/NifB D3H41_11525 IPR013483 Molybdenum cofactor biosynthesis protein A D3H41_11525 IPR010505 Molybdenum cofactor synthesis C-terminal D3H41_11525 IPR007197 Radical SAM D3H41_11530 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 D3H41_11530 IPR010119 Gluconeogenesis factor D3H41_11530 IPR038136 Gluconeogenesis factor superfamily D3H41_11535 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain D3H41_11535 IPR036641 HPT domain superfamily D3H41_11540 IPR025944 Sigma-54 interaction domain, conserved site D3H41_11540 IPR003593 AAA+ ATPase domain D3H41_11540 IPR002078 RNA polymerase sigma factor 54 interaction domain D3H41_11540 IPR001789 Signal transduction response regulator, receiver domain D3H41_11540 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_11540 IPR002197 DNA binding HTH domain, Fis-type D3H41_11540 IPR009057 Homeobox-like domain superfamily D3H41_11540 IPR011006 CheY-like superfamily D3H41_11540 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 D3H41_11545 IPR024759 UvrB, YAD/RRR-motif-containing domain D3H41_11545 IPR001650 Helicase, C-terminal D3H41_11545 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_11545 IPR001943 UVR domain D3H41_11545 IPR036876 UVR domain superfamily D3H41_11545 IPR004807 UvrABC system, subunit B D3H41_11545 IPR014001 Helicase superfamily 1/2, ATP-binding domain D3H41_11545 IPR006935 Helicase/UvrB, N-terminal D3H41_11545 IPR041471 UvrB, interaction domain D3H41_11555 IPR004184 Pyruvate formate lyase domain D3H41_11555 IPR001150 Glycine radical domain D3H41_11555 IPR019777 Formate C-acetyltransferase glycine radical, conserved site D3H41_11555 IPR005949 Formate acetyltransferase D3H41_11560 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA D3H41_11560 IPR003667 NqrDE/RnfAE D3H41_11565 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria D3H41_11565 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain D3H41_11565 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site D3H41_11565 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB D3H41_11565 IPR007202 4Fe-4S domain D3H41_11570 IPR026902 RnfC Barrel sandwich hybrid domain D3H41_11570 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily D3H41_11570 IPR019554 Soluble ligand binding domain D3H41_11570 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC D3H41_11570 IPR009051 Alpha-helical ferredoxin D3H41_11570 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site D3H41_11570 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain D3H41_11570 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain D3H41_11575 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D D3H41_11575 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD D3H41_11580 IPR007329 FMN-binding D3H41_11580 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG D3H41_11585 IPR010968 Ion-translocating oxidoreductase complex subunit E D3H41_11585 IPR003667 NqrDE/RnfAE D3H41_11590 IPR005759 Endonuclease III D3H41_11590 IPR004036 Endonuclease III-like, conserved site-2 D3H41_11590 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif D3H41_11590 IPR004035 Endonuclease III, iron-sulphur binding site D3H41_11590 IPR011257 DNA glycosylase D3H41_11590 IPR003265 HhH-GPD domain D3H41_11590 IPR000445 Helix-hairpin-helix motif D3H41_11590 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal D3H41_11595 IPR037523 Vicinal oxygen chelate (VOC) domain D3H41_11595 IPR018146 Glyoxalase I, conserved site D3H41_11595 IPR004361 Glyoxalase I D3H41_11595 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain D3H41_11595 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D3H41_11600 IPR020206 Uncharacterised protein family, VP2110 D3H41_11605 IPR036737 OmpA-like domain superfamily D3H41_11605 IPR006690 Outer membrane protein, OmpA-like, conserved site D3H41_11605 IPR006665 OmpA-like domain D3H41_11605 IPR041544 MotY N-terminal domain D3H41_11615 IPR013520 Exonuclease, RNase T/DNA polymerase III D3H41_11615 IPR005987 Ribonuclease T D3H41_11615 IPR036397 Ribonuclease H superfamily D3H41_11615 IPR012337 Ribonuclease H-like superfamily D3H41_11620 IPR032813 Putative Na+/H+ antiporter, N-terminal D3H41_11620 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal D3H41_11640 IPR033658 Glutaredoxin, PICOT-like D3H41_11640 IPR036249 Thioredoxin-like superfamily D3H41_11640 IPR002109 Glutaredoxin D3H41_11640 IPR004480 Monothiol glutaredoxin-related D3H41_11640 IPR014434 Monothiol glutaredoxin D3H41_11645 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily D3H41_11645 IPR001189 Manganese/iron superoxide dismutase D3H41_11645 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily D3H41_11645 IPR019831 Manganese/iron superoxide dismutase, N-terminal D3H41_11645 IPR019832 Manganese/iron superoxide dismutase, C-terminal D3H41_11645 IPR019833 Manganese/iron superoxide dismutase, binding site D3H41_11660 IPR015590 Aldehyde dehydrogenase domain D3H41_11660 IPR016162 Aldehyde dehydrogenase, N-terminal D3H41_11660 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase D3H41_11660 IPR016163 Aldehyde dehydrogenase, C-terminal D3H41_11660 IPR018211 Alcohol dehydrogenase, iron-type, conserved site D3H41_11660 IPR034789 Bifunctional aldehyde-alcohol dehydrogenase, C-terminal domain D3H41_11660 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA D3H41_11660 IPR016161 Aldehyde/histidinol dehydrogenase D3H41_11660 IPR039697 Iron-type alcohol dehydrogenase-like D3H41_11665 IPR002771 Multiple antibiotic resistance (MarC)-related D3H41_11670 IPR005821 Ion transport domain D3H41_11670 IPR000595 Cyclic nucleotide-binding domain D3H41_11670 IPR018488 Cyclic nucleotide-binding, conserved site D3H41_11670 IPR018490 Cyclic nucleotide-binding-like D3H41_11670 IPR014710 RmlC-like jelly roll fold D3H41_11670 IPR028325 Voltage-gated potassium channel D3H41_11675 IPR036291 NAD(P)-binding domain superfamily D3H41_11675 IPR000534 Semialdehyde dehydrogenase, NAD-binding D3H41_11675 IPR012280 Semialdehyde dehydrogenase, dimerisation domain D3H41_11675 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site D3H41_11675 IPR012080 Aspartate-semialdehyde dehydrogenase D3H41_11675 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type D3H41_11680 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal D3H41_11680 IPR004770 Na+/H+ antiporter NhaC D3H41_11695 IPR007358 Nucleoid-associated protein NdpA D3H41_11700 IPR009857 Uncharacterised protein family UPF0352 D3H41_11700 IPR023202 YejL-like superfamily D3H41_11705 IPR012159 Inner membrane protein YejM D3H41_11705 IPR024588 Inner membrane protein YejM, N-terminal D3H41_11705 IPR000917 Sulfatase, N-terminal D3H41_11705 IPR017850 Alkaline-phosphatase-like, core domain superfamily D3H41_11715 IPR023696 Ureohydrolase domain superfamily D3H41_11715 IPR037138 Histone deacetylase domain superfamily D3H41_11715 IPR000286 Histone deacetylase family D3H41_11715 IPR023801 Histone deacetylase domain D3H41_11720 IPR002347 Short-chain dehydrogenase/reductase SDR D3H41_11720 IPR036291 NAD(P)-binding domain superfamily D3H41_11730 IPR003601 DNA topoisomerase, type IA, domain 2 D3H41_11730 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 D3H41_11730 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 D3H41_11730 IPR005738 DNA topoisomerase III D3H41_11730 IPR013497 DNA topoisomerase, type IA, central D3H41_11730 IPR023406 DNA topoisomerase, type IA, active site D3H41_11730 IPR023405 DNA topoisomerase, type IA, core domain D3H41_11730 IPR000380 DNA topoisomerase, type IA D3H41_11730 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 D3H41_11730 IPR003602 DNA topoisomerase, type IA, DNA-binding domain D3H41_11730 IPR034144 DNA topoisomerase 3-like, TOPRIM domain D3H41_11730 IPR006171 TOPRIM domain D3H41_11735 IPR000415 Nitroreductase-like D3H41_11735 IPR029479 Nitroreductase D3H41_11735 IPR026021 Putative NAD(P)H nitroreductase YdjA-like D3H41_11745 IPR036188 FAD/NAD(P)-binding domain superfamily D3H41_11745 IPR013785 Aldolase-type TIM barrel D3H41_11745 IPR023753 FAD/NAD(P)-binding domain D3H41_11745 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal D3H41_11750 IPR002142 Peptidase S49 D3H41_11750 IPR033854 Signal peptide peptidase A D3H41_11750 IPR004635 Peptidase S49, SppA D3H41_11750 IPR004634 Peptidase S49, protease IV D3H41_11750 IPR029045 ClpP/crotonase-like domain superfamily D3H41_11755 IPR037152 L-asparaginase, N-terminal domain superfamily D3H41_11755 IPR006033 Type I L-asparaginase family D3H41_11755 IPR036152 Asparaginase/glutaminase-like superfamily D3H41_11755 IPR006034 Asparaginase/glutaminase-like D3H41_11755 IPR041725 Type I (cytosolic) L-asparaginase D3H41_11755 IPR020827 Asparaginase/glutaminase, active site 1 D3H41_11755 IPR027475 Asparaginase/glutaminase, active site 2 D3H41_11755 IPR027474 L-asparaginase, N-terminal D3H41_11755 IPR027473 L-asparaginase, C-terminal D3H41_11755 IPR040919 Asparaginase/glutaminase, C-terminal D3H41_11760 IPR009749 Protein of unknown function DUF1315 D3H41_11770 IPR011057 Mss4-like superfamily D3H41_11770 IPR002579 Peptide methionine sulphoxide reductase MrsB D3H41_11770 IPR028427 Peptide methionine sulfoxide reductase D3H41_11775 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family D3H41_11775 IPR036291 NAD(P)-binding domain superfamily D3H41_11775 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I D3H41_11775 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain D3H41_11775 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain D3H41_11775 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site D3H41_11780 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase D3H41_11780 IPR011013 Galactose mutarotase-like domain superfamily D3H41_11780 IPR014718 Glycoside hydrolase-type carbohydrate-binding D3H41_11780 IPR025532 Glucose-6-phosphate 1-epimerase D3H41_11785 IPR035965 PAS domain superfamily D3H41_11785 IPR000700 PAS-associated, C-terminal D3H41_11785 IPR004090 Chemotaxis methyl-accepting receptor D3H41_11785 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain D3H41_11785 IPR000014 PAS domain D3H41_11785 IPR013655 PAS fold-3 D3H41_11785 IPR001610 PAC motif D3H41_11790 IPR025714 Methyltransferase domain D3H41_11790 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3H41_11790 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted D3H41_11810 IPR017850 Alkaline-phosphatase-like, core domain superfamily D3H41_11810 IPR018299 Alkaline phosphatase, active site D3H41_11810 IPR001952 Alkaline phosphatase D3H41_11820 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain D3H41_11820 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D3H41_11820 IPR037523 Vicinal oxygen chelate (VOC) domain D3H41_11820 IPR018146 Glyoxalase I, conserved site D3H41_11820 IPR004361 Glyoxalase I D3H41_11825 IPR007138 Antibiotic biosynthesis monooxygenase domain D3H41_11825 IPR011008 Dimeric alpha-beta barrel D3H41_11830 IPR006685 Mechanosensitive ion channel MscS D3H41_11830 IPR011066 Mechanosensitive ion channel MscS, C-terminal D3H41_11830 IPR010920 LSM domain superfamily D3H41_11830 IPR006686 Mechanosensitive ion channel MscS, conserved site D3H41_11830 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 D3H41_11830 IPR008910 Conserved TM helix D3H41_11830 IPR023408 Mechanosensitive ion channel MscS domain superfamily D3H41_11835 IPR005358 Putative zinc- or iron-chelating domain containing protein D3H41_11835 IPR008228 Uncharacterised conserved protein UCP006173 D3H41_11840 IPR007341 Transglycosylase-associated protein D3H41_11845 IPR005358 Putative zinc- or iron-chelating domain containing protein D3H41_11850 IPR022357 Major intrinsic protein, conserved site D3H41_11850 IPR000425 Major intrinsic protein D3H41_11850 IPR023743 Aquaporin Z D3H41_11850 IPR034294 Aquaporin transporter D3H41_11850 IPR023271 Aquaporin-like D3H41_11855 IPR000093 DNA recombination protein RecR D3H41_11855 IPR023627 Recombination protein RecR D3H41_11855 IPR023628 Recombination protein RecR, C4-type zinc finger D3H41_11855 IPR034137 RecR, TOPRIM domain D3H41_11855 IPR006171 TOPRIM domain D3H41_11855 IPR015967 Recombination protein RecR, conserved site D3H41_11860 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily D3H41_11860 IPR004401 Nucleoid-associated protein YbaB/EbfC family D3H41_11865 IPR012763 DNA polymerase III, subunit gamma/ tau D3H41_11865 IPR001270 ClpA/B family D3H41_11865 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal D3H41_11865 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV D3H41_11865 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_11865 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily D3H41_11865 IPR003593 AAA+ ATPase domain D3H41_11865 IPR022754 DNA polymerase III, gamma subunit, domain III D3H41_11865 IPR021029 DNA polymerase III, tau subunit, domain V D3H41_11870 IPR029057 Phosphoribosyltransferase-like D3H41_11870 IPR005764 Adenine phosphoribosyl transferase D3H41_11870 IPR000836 Phosphoribosyltransferase domain D3H41_11875 IPR007401 Protein of unknown function DUF454 D3H41_11885 IPR039420 Transcriptional regulatory protein WalR-like D3H41_11885 IPR001789 Signal transduction response regulator, receiver domain D3H41_11885 IPR036457 PPM-type phosphatase domain superfamily D3H41_11885 IPR011006 CheY-like superfamily D3H41_11885 IPR028616 Regulator of RpoS D3H41_11890 IPR036390 Winged helix DNA-binding domain superfamily D3H41_11890 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_11890 IPR000847 Transcription regulator HTH, LysR D3H41_11890 IPR005119 LysR, substrate-binding D3H41_11895 IPR029055 Nucleophile aminohydrolases, N-terminal D3H41_11895 IPR000836 Phosphoribosyltransferase domain D3H41_11895 IPR035584 Amidophosphoribosyltransferase, N-terminal D3H41_11895 IPR005854 Amidophosphoribosyltransferase D3H41_11895 IPR029057 Phosphoribosyltransferase-like D3H41_11895 IPR017932 Glutamine amidotransferase type 2 domain D3H41_11900 IPR003825 Colicin V production, CvpA D3H41_11905 IPR032898 Cell division protein DedD D3H41_11905 IPR036680 Sporulation-like domain superfamily D3H41_11905 IPR007730 Sporulation-like domain D3H41_11910 IPR036565 Mur-like, catalytic domain superfamily D3H41_11910 IPR013221 Mur ligase, central D3H41_11910 IPR036615 Mur ligase, C-terminal domain superfamily D3H41_11910 IPR004101 Mur ligase, C-terminal D3H41_11910 IPR001645 Folylpolyglutamate synthetase D3H41_11910 IPR018109 Folylpolyglutamate synthetase, conserved site D3H41_11915 IPR034733 Acetyl-CoA carboxylase D3H41_11915 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit D3H41_11915 IPR029045 ClpP/crotonase-like domain superfamily D3H41_11915 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal D3H41_11915 IPR041010 Acetyl-coA carboxylase zinc finger domain D3H41_11925 IPR020103 Pseudouridine synthase, catalytic domain superfamily D3H41_11925 IPR001406 Pseudouridine synthase I, TruA D3H41_11925 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain D3H41_11925 IPR020095 Pseudouridine synthase I, TruA, C-terminal D3H41_11935 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site D3H41_11935 IPR012080 Aspartate-semialdehyde dehydrogenase D3H41_11935 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type D3H41_11935 IPR036291 NAD(P)-binding domain superfamily D3H41_11935 IPR000534 Semialdehyde dehydrogenase, NAD-binding D3H41_11935 IPR012280 Semialdehyde dehydrogenase, dimerisation domain D3H41_11940 IPR038251 PdxB, dimerisation domain superfamily D3H41_11940 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain D3H41_11940 IPR020921 Erythronate-4-phosphate dehydrogenase D3H41_11940 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain D3H41_11940 IPR036291 NAD(P)-binding domain superfamily D3H41_11940 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D3H41_11940 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site D3H41_11950 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain D3H41_11950 IPR016039 Thiolase-like D3H41_11950 IPR000794 Beta-ketoacyl synthase D3H41_11950 IPR018201 Beta-ketoacyl synthase, active site D3H41_11950 IPR014031 Beta-ketoacyl synthase, C-terminal D3H41_11950 IPR014030 Beta-ketoacyl synthase, N-terminal D3H41_11955 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal D3H41_11955 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC D3H41_11955 IPR008471 MnmC-like methyltransferase D3H41_11955 IPR036188 FAD/NAD(P)-binding domain superfamily D3H41_11955 IPR006076 FAD dependent oxidoreductase D3H41_11960 IPR005025 NADPH-dependent FMN reductase-like D3H41_11960 IPR029039 Flavoprotein-like superfamily D3H41_11970 IPR014987 Uncharacterised protein family YfcL D3H41_11975 IPR007411 Elongation factor P hydroxylase D3H41_11985 IPR005115 Uncharacterised domain UPF0126 D3H41_11990 IPR035904 Chorismate synthase AroC superfamily D3H41_11990 IPR020541 Chorismate synthase, conserved site D3H41_11990 IPR000453 Chorismate synthase D3H41_11995 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3H41_11995 IPR007848 Methyltransferase small domain D3H41_11995 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase D3H41_11995 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific D3H41_11995 IPR004556 Methyltransferase HemK-like D3H41_11995 IPR002052 DNA methylase, N-6 adenine-specific, conserved site D3H41_12000 IPR022990 Uncharacterised protein family UPF0115 D3H41_12000 IPR036063 Smr domain superfamily D3H41_12000 IPR002625 Smr domain D3H41_12005 IPR013078 Histidine phosphatase superfamily, clade-1 D3H41_12005 IPR004449 Phosphohistidine phosphatase SixA D3H41_12005 IPR029033 Histidine phosphatase superfamily D3H41_12010 IPR001431 Peptidase M16, zinc-binding site D3H41_12010 IPR011765 Peptidase M16, N-terminal D3H41_12010 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like D3H41_12010 IPR032632 Peptidase M16, middle/third domain D3H41_12010 IPR007863 Peptidase M16, C-terminal D3H41_12020 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site D3H41_12020 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal D3H41_12020 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily D3H41_12020 IPR029045 ClpP/crotonase-like domain superfamily D3H41_12020 IPR001753 Enoyl-CoA hydratase/isomerase D3H41_12020 IPR012802 Fatty oxidation complex, alpha subunit FadJ D3H41_12020 IPR036291 NAD(P)-binding domain superfamily D3H41_12020 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding D3H41_12020 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site D3H41_12025 IPR002155 Thiolase D3H41_12025 IPR020617 Thiolase, C-terminal D3H41_12025 IPR020616 Thiolase, N-terminal D3H41_12025 IPR020613 Thiolase, conserved site D3H41_12025 IPR012806 Acetyl-CoA C-acyltransferase FadI D3H41_12025 IPR016039 Thiolase-like D3H41_12035 IPR014284 RNA polymerase sigma-70 like domain D3H41_12035 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_12035 IPR013324 RNA polymerase sigma factor, region 3/4-like D3H41_12035 IPR013325 RNA polymerase sigma factor, region 2 D3H41_12035 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 D3H41_12035 IPR007627 RNA polymerase sigma-70 region 2 D3H41_12035 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site D3H41_12035 IPR039425 RNA polymerase sigma-70 like D3H41_12045 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) D3H41_12045 IPR042117 OMPP1/FadL/TodX superfamily D3H41_12050 IPR042117 OMPP1/FadL/TodX superfamily D3H41_12050 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) D3H41_12055 IPR007428 MlaA lipoprotein D3H41_12060 IPR011990 Tetratricopeptide-like helical domain superfamily D3H41_12060 IPR019734 Tetratricopeptide repeat D3H41_12060 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily D3H41_12060 IPR013026 Tetratricopeptide repeat-containing domain D3H41_12060 IPR005616 CcmH/CycL/Ccl2/NrfF family D3H41_12065 IPR005616 CcmH/CycL/Ccl2/NrfF family D3H41_12065 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily D3H41_12065 IPR017560 Cytochrome c-type biogenesis protein CcmI D3H41_12065 IPR011990 Tetratricopeptide-like helical domain superfamily D3H41_12065 IPR019734 Tetratricopeptide repeat D3H41_12065 IPR013026 Tetratricopeptide repeat-containing domain D3H41_12070 IPR017937 Thioredoxin, conserved site D3H41_12070 IPR013766 Thioredoxin domain D3H41_12070 IPR036249 Thioredoxin-like superfamily D3H41_12070 IPR013740 Redoxin D3H41_12070 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE D3H41_12075 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal D3H41_12075 IPR003568 Cytochrome c-type biogenesis protein CcmF D3H41_12075 IPR003567 Cytochrome c-type biogenesis protein D3H41_12075 IPR002541 Cytochrome c assembly protein D3H41_12080 IPR004329 CcmE/CycJ protein D3H41_12080 IPR036127 CcmE-like superfamily D3H41_12085 IPR007078 Haem exporter protein D (CcmD) D3H41_12090 IPR002541 Cytochrome c assembly protein D3H41_12090 IPR003557 Cytochrome c-type biogenesis protein CcmC D3H41_12095 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria D3H41_12095 IPR003544 Cytochrome c-type biogenesis protein CcmB D3H41_12100 IPR003593 AAA+ ATPase domain D3H41_12100 IPR003439 ABC transporter-like D3H41_12100 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_12100 IPR017871 ABC transporter, conserved site D3H41_12100 IPR005895 ABC transporter, haem export, CcmA D3H41_12110 IPR002545 CheW-like domain D3H41_12110 IPR036061 CheW-like domain superfamily D3H41_12110 IPR039315 Chemotaxis protein CheW D3H41_12120 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_12120 IPR025669 AAA domain D3H41_12125 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type D3H41_12125 IPR035909 Methylesterase CheB, C-terminal D3H41_12125 IPR011006 CheY-like superfamily D3H41_12125 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase D3H41_12125 IPR001789 Signal transduction response regulator, receiver domain D3H41_12130 IPR004358 Signal transduction histidine kinase-related protein, C-terminal D3H41_12130 IPR004105 Histidine kinase CheA-like, homodimeric domain D3H41_12130 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily D3H41_12130 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily D3H41_12130 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3H41_12130 IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily D3H41_12130 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding D3H41_12130 IPR036061 CheW-like domain superfamily D3H41_12130 IPR002545 CheW-like domain D3H41_12130 IPR003594 Histidine kinase/HSP90-like ATPase D3H41_12130 IPR036641 HPT domain superfamily D3H41_12130 IPR005467 Histidine kinase domain D3H41_12130 IPR035891 CheY-binding domain of CheA D3H41_12130 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain D3H41_12135 IPR007439 Chemotaxis phosphatase, CheZ D3H41_12140 IPR001789 Signal transduction response regulator, receiver domain D3H41_12140 IPR011006 CheY-like superfamily D3H41_12145 IPR013324 RNA polymerase sigma factor, region 3/4-like D3H41_12145 IPR028617 RNA polymerase sigma factor FliA D3H41_12145 IPR013325 RNA polymerase sigma factor, region 2 D3H41_12145 IPR007627 RNA polymerase sigma-70 region 2 D3H41_12145 IPR000943 RNA polymerase sigma-70 D3H41_12145 IPR012845 RNA polymerase sigma factor, FliA/WhiG D3H41_12145 IPR007630 RNA polymerase sigma-70 region 4 D3H41_12145 IPR007624 RNA polymerase sigma-70 region 3 D3H41_12145 IPR014284 RNA polymerase sigma-70 like domain D3H41_12150 IPR025501 ATP binding protein MinD D3H41_12150 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_12150 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 D3H41_12155 IPR003593 AAA+ ATPase domain D3H41_12155 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain D3H41_12155 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_12155 IPR020006 Flagellar biosynthesis protein FlhF D3H41_12160 IPR001712 Type III secretion system FHIPEP D3H41_12160 IPR006301 Flagellar biosynthesis protein FlhA D3H41_12160 IPR042194 FHIPEP, domain 1 D3H41_12160 IPR042193 FHIPEP, domain 3 D3H41_12160 IPR042196 FHIPEP, domain 4 D3H41_12160 IPR025505 FHIPEP conserved site D3H41_12165 IPR006135 Type III secretion system substrate exporter D3H41_12165 IPR006136 Flagellar biosynthetic protein FlhB D3H41_12165 IPR029025 Type III secretion system substrate exporter, C-terminal D3H41_12170 IPR006303 Flagellar biosynthesis protein FliR D3H41_12170 IPR002010 Type III secretion system inner membrane R protein D3H41_12175 IPR002191 Bacterial export protein family 3 D3H41_12175 IPR006305 Flagellar biosynthesis protein FliQ D3H41_12180 IPR005837 Flagellar transport protein FliP D3H41_12180 IPR005838 Type III secretion system inner membrane P protein D3H41_12185 IPR022781 Flagellar biosynthesis protein, FliO D3H41_12190 IPR001543 Surface presentation of antigen (SpoA) D3H41_12190 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb D3H41_12190 IPR012826 Flagellar motor switch FliN D3H41_12190 IPR036429 SpoA-like superfamily D3H41_12195 IPR028976 CheC-like superfamily D3H41_12195 IPR001689 Flagellar motor switch protein FliM D3H41_12195 IPR036429 SpoA-like superfamily D3H41_12195 IPR001543 Surface presentation of antigen (SpoA) D3H41_12220 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site D3H41_12220 IPR040627 T3SS EscN ATPase, C-terminal D3H41_12220 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_12220 IPR020005 Flagellar export ATPase FliI, clade 1 D3H41_12220 IPR005714 ATPase, type III secretion system, FliI/YscN D3H41_12220 IPR032463 ATPase, type III secretion system, FliI D3H41_12220 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain D3H41_12220 IPR003593 AAA+ ATPase domain D3H41_12230 IPR000090 Flagellar motor switch protein FliG D3H41_12230 IPR028263 Flagellar motor switch protein FliG, N-terminal domain D3H41_12230 IPR023087 Flagellar motor switch protein FliG, C-terminal D3H41_12230 IPR032779 Flagellar motor switch protein FliG, middle domain D3H41_12230 IPR011002 Flagellar motor switch protein FliG, alpha-helical D3H41_12235 IPR013556 Flagellar M-ring C-terminal D3H41_12235 IPR006182 Secretory protein YscJ/FliF D3H41_12235 IPR000067 Flagellar M-ring protein FliF D3H41_12240 IPR001624 Flagellar hook-basal body complex protein FliE D3H41_12245 IPR009057 Homeobox-like domain superfamily D3H41_12245 IPR003593 AAA+ ATPase domain D3H41_12245 IPR011006 CheY-like superfamily D3H41_12245 IPR025944 Sigma-54 interaction domain, conserved site D3H41_12245 IPR002078 RNA polymerase sigma factor 54 interaction domain D3H41_12245 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 D3H41_12245 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 D3H41_12245 IPR002197 DNA binding HTH domain, Fis-type D3H41_12245 IPR001789 Signal transduction response regulator, receiver domain D3H41_12245 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_12250 IPR003594 Histidine kinase/HSP90-like ATPase D3H41_12250 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain D3H41_12250 IPR004358 Signal transduction histidine kinase-related protein, C-terminal D3H41_12250 IPR029151 Periplasmic sensor-like domain superfamily D3H41_12250 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily D3H41_12250 IPR005467 Histidine kinase domain D3H41_12250 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3H41_12255 IPR003593 AAA+ ATPase domain D3H41_12255 IPR002197 DNA binding HTH domain, Fis-type D3H41_12255 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_12255 IPR001789 Signal transduction response regulator, receiver domain D3H41_12255 IPR010114 DNA-binding transcriptional regulator NtrC D3H41_12255 IPR002078 RNA polymerase sigma factor 54 interaction domain D3H41_12255 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 D3H41_12255 IPR011006 CheY-like superfamily D3H41_12255 IPR009057 Homeobox-like domain superfamily D3H41_12255 IPR025944 Sigma-54 interaction domain, conserved site D3H41_12255 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 D3H41_12260 IPR003713 Flagellar protein FliS D3H41_12260 IPR036584 Flagellar protein FliS superfamily D3H41_12270 IPR010810 Flagellin hook, IN motif D3H41_12270 IPR040026 Flagellar hook-associated protein 2 D3H41_12270 IPR003481 Flagellar hook-associated protein 2, N-terminal D3H41_12270 IPR010809 Flagellar hook-associated protein 2, C-terminal D3H41_12275 IPR005186 FlaG protein D3H41_12275 IPR035924 FlaG-like superfamily D3H41_12280 IPR042187 Flagellin, C-terminal domain, subdomain 2 D3H41_12280 IPR001029 Flagellin, D0/D1 domain D3H41_12280 IPR010810 Flagellin hook, IN motif D3H41_12280 IPR001492 Flagellin D3H41_12285 IPR010810 Flagellin hook, IN motif D3H41_12285 IPR001029 Flagellin, D0/D1 domain D3H41_12285 IPR042187 Flagellin, C-terminal domain, subdomain 2 D3H41_12285 IPR001492 Flagellin D3H41_12295 IPR010810 Flagellin hook, IN motif D3H41_12295 IPR001029 Flagellin, D0/D1 domain D3H41_12295 IPR001492 Flagellin D3H41_12295 IPR042187 Flagellin, C-terminal domain, subdomain 2 D3H41_12300 IPR011008 Dimeric alpha-beta barrel D3H41_12300 IPR006314 Dyp-type peroxidase D3H41_12305 IPR021318 Protein of unknown function DUF2919 D3H41_12325 IPR006660 Arsenate reductase-like D3H41_12325 IPR036249 Thioredoxin-like superfamily D3H41_12325 IPR006504 Transcriptional regulator Spx/MgsR D3H41_12330 IPR011650 Peptidase M20, dimerisation domain D3H41_12330 IPR036264 Bacterial exopeptidase dimerisation domain D3H41_12330 IPR002933 Peptidase M20 D3H41_12330 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria D3H41_12330 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site D3H41_12350 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA D3H41_12350 IPR020625 Schiff base-forming aldolase, active site D3H41_12350 IPR013785 Aldolase-type TIM barrel D3H41_12350 IPR002220 DapA-like D3H41_12350 IPR020624 Schiff base-forming aldolase, conserved site D3H41_12360 IPR013766 Thioredoxin domain D3H41_12360 IPR036249 Thioredoxin-like superfamily D3H41_12360 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant D3H41_12365 IPR002549 Transmembrane protein TqsA-like D3H41_12375 IPR001915 Peptidase M48 D3H41_12375 IPR030873 Beta-barrel assembly-enhancing protease D3H41_12375 IPR011990 Tetratricopeptide-like helical domain superfamily D3H41_12375 IPR013026 Tetratricopeptide repeat-containing domain D3H41_12375 IPR019734 Tetratricopeptide repeat D3H41_12380 IPR006659 Arsenate reductase D3H41_12380 IPR036249 Thioredoxin-like superfamily D3H41_12380 IPR006660 Arsenate reductase-like D3H41_12385 IPR010089 Flavoprotein WrbA-like D3H41_12385 IPR029039 Flavoprotein-like superfamily D3H41_12385 IPR005025 NADPH-dependent FMN reductase-like D3H41_12385 IPR008254 Flavodoxin/nitric oxide synthase D3H41_12385 IPR001226 Flavodoxin, conserved site D3H41_12400 IPR006043 Xanthine/uracil/vitamin C permease D3H41_12400 IPR029935 Uracil permease D3H41_12400 IPR006042 Xanthine/uracil permease D3H41_12405 IPR034332 Uracil phosphoribosyltransferase, bacterial-type D3H41_12405 IPR000836 Phosphoribosyltransferase domain D3H41_12405 IPR029057 Phosphoribosyltransferase-like D3H41_12405 IPR005765 Uracil phosphoribosyl transferase D3H41_12410 IPR010918 PurM-like, C-terminal domain D3H41_12410 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase D3H41_12410 IPR016188 PurM-like, N-terminal domain D3H41_12410 IPR036921 PurM-like, N-terminal domain superfamily D3H41_12410 IPR036676 PurM-like, C-terminal domain superfamily D3H41_12415 IPR002376 Formyl transferase, N-terminal D3H41_12415 IPR004607 Phosphoribosylglycinamide formyltransferase D3H41_12415 IPR001555 Phosphoribosylglycinamide formyltransferase, active site D3H41_12415 IPR036477 Formyl transferase, N-terminal domain superfamily D3H41_12420 IPR029055 Nucleophile aminohydrolases, N-terminal D3H41_12420 IPR026869 Putative glutamine amidotransferase type 2 D3H41_12420 IPR017932 Glutamine amidotransferase type 2 domain D3H41_12425 IPR001347 Sugar isomerase (SIS) D3H41_12425 IPR035461 GmhA/DiaA D3H41_12425 IPR004515 Phosphoheptose isomerase D3H41_12430 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal D3H41_12430 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily D3H41_12430 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily D3H41_12430 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type D3H41_12430 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal D3H41_12430 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal D3H41_12430 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain D3H41_12435 IPR036513 STAS domain superfamily D3H41_12435 IPR002645 STAS domain D3H41_12435 IPR001902 SLC26A/SulP transporter D3H41_12435 IPR011547 SLC26A/SulP transporter domain D3H41_12460 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain D3H41_12460 IPR013520 Exonuclease, RNase T/DNA polymerase III D3H41_12460 IPR012337 Ribonuclease H-like superfamily D3H41_12460 IPR036397 Ribonuclease H superfamily D3H41_12460 IPR006309 DNA polymerase 3, epsilon subunit D3H41_12465 IPR012337 Ribonuclease H-like superfamily D3H41_12465 IPR022892 Ribonuclease HI D3H41_12465 IPR036397 Ribonuclease H superfamily D3H41_12465 IPR002156 Ribonuclease H domain D3H41_12470 IPR026669 Arsenite methyltransferase-like D3H41_12470 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3H41_12470 IPR013216 Methyltransferase type 11 D3H41_12475 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain D3H41_12475 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like D3H41_12475 IPR001279 Metallo-beta-lactamase D3H41_12475 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain D3H41_12475 IPR017782 Hydroxyacylglutathione hydrolase D3H41_12480 IPR036779 LysM domain superfamily D3H41_12480 IPR023346 Lysozyme-like domain superfamily D3H41_12480 IPR000189 Prokaryotic transglycosylase, active site D3H41_12480 IPR018392 LysM domain D3H41_12480 IPR008258 Transglycosylase SLT domain 1 D3H41_12490 IPR022958 Uncharacterised protein family UPF0294 D3H41_12490 IPR005135 Endonuclease/exonuclease/phosphatase D3H41_12490 IPR036691 Endonuclease/exonuclease/phosphatase superfamily D3H41_12495 IPR017918 Nitrogen regulatory protein PII, conserved site D3H41_12495 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal D3H41_12495 IPR002332 Nitrogen regulatory protein P-II, urydylation site D3H41_12495 IPR011322 Nitrogen regulatory PII-like, alpha/beta D3H41_12495 IPR002187 Nitrogen regulatory protein PII D3H41_12500 IPR036909 Cytochrome c-like domain superfamily D3H41_12500 IPR009056 Cytochrome c-like domain D3H41_12505 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3H41_12505 IPR012094 tRNA(Ile)-lysidine synthase D3H41_12505 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal D3H41_12505 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain D3H41_12505 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal D3H41_12505 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal D3H41_12510 IPR001095 Acetyl-CoA carboxylase, alpha subunit D3H41_12510 IPR029045 ClpP/crotonase-like domain superfamily D3H41_12510 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal D3H41_12515 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain D3H41_12515 IPR040982 DNA polymerase III alpha subunit finger domain D3H41_12515 IPR029460 DNA polymerase, helix-hairpin-helix motif D3H41_12515 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type D3H41_12515 IPR004013 PHP domain D3H41_12515 IPR003141 Polymerase/histidinol phosphatase, N-terminal D3H41_12515 IPR016195 Polymerase/histidinol phosphatase-like D3H41_12515 IPR004805 DNA polymerase III, alpha subunit D3H41_12515 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain D3H41_12520 IPR024567 Ribonuclease HII/HIII domain D3H41_12520 IPR022898 Ribonuclease HII D3H41_12520 IPR001352 Ribonuclease HII/HIII D3H41_12520 IPR036397 Ribonuclease H superfamily D3H41_12520 IPR012337 Ribonuclease H-like superfamily D3H41_12525 IPR003835 Glycosyl transferase, family 19 D3H41_12530 IPR011004 Trimeric LpxA-like superfamily D3H41_12530 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase D3H41_12530 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal D3H41_12530 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily D3H41_12530 IPR001451 Hexapeptide repeat D3H41_12535 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ D3H41_12535 IPR029069 HotDog domain superfamily D3H41_12535 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ D3H41_12540 IPR001451 Hexapeptide repeat D3H41_12540 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD D3H41_12540 IPR011004 Trimeric LpxA-like superfamily D3H41_12540 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region D3H41_12545 IPR005632 Chaperone protein Skp D3H41_12545 IPR024930 Skp domain superfamily D3H41_12550 IPR000184 Bacterial surface antigen (D15) D3H41_12550 IPR034746 POTRA domain D3H41_12550 IPR039910 Surface antigen D15-like D3H41_12550 IPR010827 POTRA domain, BamA/TamA-like D3H41_12550 IPR023707 Outer membrane protein assembly factor BamA D3H41_12555 IPR008915 Peptidase M50 D3H41_12555 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase D3H41_12555 IPR041489 PDZ domain 6 D3H41_12555 IPR036034 PDZ superfamily D3H41_12555 IPR001478 PDZ domain D3H41_12560 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal D3H41_12560 IPR036291 NAD(P)-binding domain superfamily D3H41_12560 IPR036169 DXP reductoisomerase, C-terminal domain superfamily D3H41_12560 IPR026877 DXP reductoisomerase C-terminal domain D3H41_12560 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal D3H41_12560 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase D3H41_12565 IPR000374 Phosphatidate cytidylyltransferase D3H41_12570 IPR036424 Decaprenyl diphosphate synthase-like superfamily D3H41_12570 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site D3H41_12570 IPR001441 Decaprenyl diphosphate synthase-like D3H41_12575 IPR023584 Ribosome recycling factor domain D3H41_12575 IPR002661 Ribosome recycling factor D3H41_12575 IPR036191 RRF superfamily D3H41_12580 IPR036393 Acetylglutamate kinase-like superfamily D3H41_12580 IPR001048 Aspartate/glutamate/uridylate kinase D3H41_12580 IPR011817 Uridylate kinase D3H41_12580 IPR015963 Uridylate kinase, bacteria D3H41_12585 IPR018101 Translation elongation factor Ts, conserved site D3H41_12585 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation D3H41_12585 IPR009060 UBA-like superfamily D3H41_12585 IPR036402 Elongation factor Ts, dimerisation domain superfamily D3H41_12585 IPR001816 Translation elongation factor EFTs/EF1B D3H41_12590 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily D3H41_12590 IPR001865 Ribosomal protein S2 D3H41_12590 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid D3H41_12590 IPR018130 Ribosomal protein S2, conserved site D3H41_12595 IPR036005 Creatinase/aminopeptidase-like D3H41_12595 IPR000994 Peptidase M24 D3H41_12595 IPR001714 Peptidase M24, methionine aminopeptidase D3H41_12595 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 D3H41_12600 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme D3H41_12600 IPR002912 ACT domain D3H41_12600 IPR003607 HD/PDEase domain D3H41_12600 IPR006674 HD domain D3H41_12600 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase D3H41_12600 IPR002934 Polymerase, nucleotidyl transferase domain D3H41_12605 IPR020911 Uncharacterised protein family UPF0325 D3H41_12610 IPR020103 Pseudouridine synthase, catalytic domain superfamily D3H41_12610 IPR006145 Pseudouridine synthase, RsuA/RluA D3H41_12610 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site D3H41_12615 IPR036814 YqcC-like superfamily D3H41_12615 IPR007384 Protein of unknown function UCP006257 D3H41_12615 IPR023376 YqcC-like domain D3H41_12645 IPR003791 Protein of unknown function UPF0178 D3H41_12650 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal D3H41_12650 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D3H41_12650 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 D3H41_12650 IPR016039 Thiolase-like D3H41_12655 IPR001509 NAD-dependent epimerase/dehydratase D3H41_12655 IPR036291 NAD(P)-binding domain superfamily D3H41_12680 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT D3H41_12680 IPR011540 AbgT, Proteobacteria D3H41_12685 IPR035977 Ribosomal protein L36 superfamily D3H41_12685 IPR000473 Ribosomal protein L36 D3H41_12690 IPR034704 L28p-like D3H41_12690 IPR027493 Ribosomal protein L31 type B D3H41_12690 IPR042105 Ribosomal protein L31 superfamily D3H41_12690 IPR002150 Ribosomal protein L31 D3H41_12695 IPR023370 TrmO-like, N-terminal domain D3H41_12695 IPR041369 TrmO, C-terminal D3H41_12695 IPR023368 Uncharacterised protein family UPF0066, conserved site D3H41_12695 IPR040372 YaeB-like D3H41_12695 IPR036413 YaeB-like superfamily D3H41_12695 IPR036414 YaeB, N-terminal domain superfamily D3H41_12700 IPR036621 Anticodon-binding domain superfamily D3H41_12700 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type D3H41_12700 IPR006195 Aminoacyl-tRNA synthetase, class II D3H41_12700 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 D3H41_12700 IPR033730 Prokaryote proline-tRNA ligase core domain D3H41_12700 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily D3H41_12700 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain D3H41_12700 IPR002316 Proline-tRNA ligase, class IIa D3H41_12700 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) D3H41_12700 IPR004154 Anticodon-binding D3H41_12710 IPR009624 Uncharacterised protein family UPF0253 D3H41_12720 IPR000175 Sodium:neurotransmitter symporter D3H41_12720 IPR037272 Sodium:neurotransmitter symporter superfamily D3H41_12725 IPR013783 Immunoglobulin-like fold D3H41_12725 IPR001223 Glycoside hydrolase family 18, catalytic domain D3H41_12725 IPR003610 Carbohydrate-binding module family 5/12 D3H41_12725 IPR029070 Chitinase insertion domain superfamily D3H41_12725 IPR011583 Chitinase II D3H41_12725 IPR009470 Chitinase, C-terminal D3H41_12725 IPR036573 Carbohydrate-binding module superfamily 5/12 D3H41_12725 IPR017853 Glycoside hydrolase superfamily D3H41_12735 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal D3H41_12735 IPR023459 Transcription elongation factor GreA/GreB family D3H41_12735 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal D3H41_12735 IPR028624 Transcription elongation factor GreA/GreB D3H41_12735 IPR006359 Transcription elongation factor GreA D3H41_12735 IPR018151 Transcription elongation factor, GreA/GreB, conserved site D3H41_12735 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily D3H41_12735 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily D3H41_12740 IPR002121 HRDC domain D3H41_12740 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_12740 IPR018982 RQC domain D3H41_12740 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain D3H41_12740 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_12740 IPR010997 HRDC-like superfamily D3H41_12740 IPR001650 Helicase, C-terminal D3H41_12740 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial D3H41_12740 IPR004589 DNA helicase, ATP-dependent, RecQ type D3H41_12740 IPR011545 DEAD/DEAH box helicase domain D3H41_12740 IPR014001 Helicase superfamily 1/2, ATP-binding domain D3H41_12745 IPR001126 UmuC domain D3H41_12745 IPR024728 DNA polymerase type-Y, HhH motif D3H41_12745 IPR022880 DNA polymerase IV D3H41_12745 IPR017961 DNA polymerase, Y-family, little finger domain D3H41_12745 IPR036775 DNA polymerase, Y-family, little finger domain superfamily D3H41_12755 IPR011006 CheY-like superfamily D3H41_12755 IPR000160 GGDEF domain D3H41_12755 IPR029787 Nucleotide cyclase D3H41_12755 IPR001789 Signal transduction response regulator, receiver domain D3H41_12765 IPR003374 ApbE-like superfamily D3H41_12765 IPR024932 Flavin transferase ApbE D3H41_12765 IPR042159 Flavin-trafficking protein ApbE D3H41_12770 IPR036010 2Fe-2S ferredoxin-like superfamily D3H41_12770 IPR017927 FAD-binding domain, ferredoxin reductase-type D3H41_12770 IPR001433 Oxidoreductase FAD/NAD(P)-binding D3H41_12770 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain D3H41_12770 IPR012675 Beta-grasp domain superfamily D3H41_12770 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain D3H41_12770 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F D3H41_12770 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain D3H41_12770 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase D3H41_12770 IPR017938 Riboflavin synthase-like beta-barrel D3H41_12775 IPR003667 NqrDE/RnfAE D3H41_12775 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E D3H41_12780 IPR003667 NqrDE/RnfAE D3H41_12780 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D D3H41_12785 IPR007329 FMN-binding D3H41_12785 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C D3H41_12790 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD D3H41_12790 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B D3H41_12795 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain D3H41_12795 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A D3H41_12800 IPR036065 BolA-like superfamily D3H41_12800 IPR002634 BolA protein D3H41_12805 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD D3H41_12805 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3H41_12805 IPR007848 Methyltransferase small domain D3H41_12810 IPR012640 Membrane lipoprotein, lipid attachment site D3H41_12810 IPR005619 Uncharacterised protein family, YajG D3H41_12815 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain D3H41_12815 IPR029000 Cyclophilin-like domain superfamily D3H41_12815 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site D3H41_12820 IPR011701 Major facilitator superfamily D3H41_12820 IPR036259 MFS transporter superfamily D3H41_12820 IPR020846 Major facilitator superfamily domain D3H41_12820 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 D3H41_12830 IPR039425 RNA polymerase sigma-70 like D3H41_12830 IPR014284 RNA polymerase sigma-70 like domain D3H41_12830 IPR007627 RNA polymerase sigma-70 region 2 D3H41_12830 IPR007630 RNA polymerase sigma-70 region 4 D3H41_12830 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_12830 IPR013325 RNA polymerase sigma factor, region 2 D3H41_12830 IPR013324 RNA polymerase sigma factor, region 3/4-like D3H41_12850 IPR003055 Nucleoside-specific channel-forming protein Tsx D3H41_12850 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like D3H41_12850 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily D3H41_12855 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily D3H41_12855 IPR013328 6-phosphogluconate dehydrogenase, domain 2 D3H41_12855 IPR036291 NAD(P)-binding domain superfamily D3H41_12855 IPR013332 Ketopantoate reductase, N-terminal domain D3H41_12855 IPR003710 Ketopantoate reductase ApbA/PanE D3H41_12855 IPR013752 Ketopantoate reductase, C-terminal domain D3H41_12860 IPR029062 Class I glutamine amidotransferase-like D3H41_12860 IPR002818 DJ-1/PfpI D3H41_12860 IPR006287 Protein/nucleic acid deglycase DJ-1 D3H41_12865 IPR016454 Cysteine desulfurase D3H41_12865 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA D3H41_12865 IPR000192 Aminotransferase class V domain D3H41_12865 IPR015421 Pyridoxal phosphate-dependent transferase, major domain D3H41_12865 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 D3H41_12865 IPR015424 Pyridoxal phosphate-dependent transferase D3H41_12865 IPR010970 Cysteine desulfurase, SufS D3H41_12870 IPR029787 Nucleotide cyclase D3H41_12870 IPR000160 GGDEF domain D3H41_12870 IPR033424 Membrane-associated sensor domain D3H41_12875 IPR003808 Fe-S metabolism associated domain, SufE-like D3H41_12875 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE D3H41_12880 IPR000594 THIF-type NAD/FAD binding fold D3H41_12880 IPR035985 Ubiquitin-activating enzyme D3H41_12885 IPR034654 MltA, 3D domain D3H41_12885 IPR010611 3D domain D3H41_12885 IPR036908 RlpA-like domain superfamily D3H41_12885 IPR026044 Membrane-bound lytic murein transglycosylase A D3H41_12885 IPR005300 Lytic transglycosylase MltA, domain B D3H41_12900 IPR016181 Acyl-CoA N-acyltransferase D3H41_12900 IPR000182 GNAT domain D3H41_12900 IPR033719 N-acetylglutamate synthase, kinase-like domain D3H41_12900 IPR010167 Amino-acid N-acetyltransferase D3H41_12900 IPR036393 Acetylglutamate kinase-like superfamily D3H41_12900 IPR001048 Aspartate/glutamate/uridylate kinase D3H41_12920 IPR003593 AAA+ ATPase domain D3H41_12920 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_12920 IPR006344 RecBCD enzyme subunit RecD D3H41_12920 IPR041851 RecBCD enzyme subunit RecD, N-terminal domain D3H41_12920 IPR027785 UvrD-like helicase C-terminal domain D3H41_12925 IPR014017 UvrD-like DNA helicase, C-terminal D3H41_12925 IPR000212 DNA helicase, UvrD/REP type D3H41_12925 IPR011604 Exonuclease, phage-type/RecB, C-terminal D3H41_12925 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_12925 IPR014016 UvrD-like helicase, ATP-binding domain D3H41_12925 IPR011335 Restriction endonuclease type II-like D3H41_12925 IPR004586 RecBCD enzyme subunit RecB D3H41_12925 IPR034739 UvrD/AddA helicase, N-terminal D3H41_12925 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type D3H41_12930 IPR013986 DExx box DNA helicase domain superfamily D3H41_12930 IPR006697 RecBCD enzyme subunit RecC D3H41_12930 IPR041500 RecC, C-terminal D3H41_12930 IPR011335 Restriction endonuclease type II-like D3H41_12930 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_12935 IPR012159 Inner membrane protein YejM D3H41_12935 IPR000917 Sulfatase, N-terminal D3H41_12935 IPR017850 Alkaline-phosphatase-like, core domain superfamily D3H41_12935 IPR024588 Inner membrane protein YejM, N-terminal D3H41_12945 IPR036390 Winged helix DNA-binding domain superfamily D3H41_12945 IPR000847 Transcription regulator HTH, LysR D3H41_12945 IPR005119 LysR, substrate-binding D3H41_12945 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_12950 IPR038627 YebG-like superfamily D3H41_12950 IPR009813 Uncharacterised protein family YebG D3H41_12965 IPR038361 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain superfamily D3H41_12965 IPR011004 Trimeric LpxA-like superfamily D3H41_12965 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family D3H41_12965 IPR001451 Hexapeptide repeat D3H41_12965 IPR019876 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, gammaproteobacteria D3H41_12965 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain D3H41_12970 IPR030395 Glycerophosphodiester phosphodiesterase domain D3H41_12970 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily D3H41_12975 IPR011701 Major facilitator superfamily D3H41_12975 IPR020846 Major facilitator superfamily domain D3H41_12975 IPR005267 Glycerol-3-phosphate transporter D3H41_12975 IPR000849 Sugar phosphate transporter D3H41_12975 IPR021159 Glycerate/sugar phosphate transporter, conserved site D3H41_12975 IPR036259 MFS transporter superfamily D3H41_12985 IPR022357 Major intrinsic protein, conserved site D3H41_12985 IPR000425 Major intrinsic protein D3H41_12985 IPR023271 Aquaporin-like D3H41_12990 IPR000577 Carbohydrate kinase, FGGY D3H41_12990 IPR005999 Glycerol kinase D3H41_12990 IPR018485 Carbohydrate kinase, FGGY, C-terminal D3H41_12990 IPR018484 Carbohydrate kinase, FGGY, N-terminal D3H41_12990 IPR018483 Carbohydrate kinase, FGGY, conserved site D3H41_12995 IPR018356 Transcription regulator, HTH DeoR-type, conserved site D3H41_12995 IPR001034 DeoR-type HTH domain D3H41_12995 IPR014036 DeoR C-terminal sensor domain D3H41_12995 IPR036390 Winged helix DNA-binding domain superfamily D3H41_12995 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_12995 IPR037171 NagB/RpiA transferase-like D3H41_13000 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily D3H41_13000 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase D3H41_13000 IPR036188 FAD/NAD(P)-binding domain superfamily D3H41_13000 IPR031656 Alpha-glycerophosphate oxidase, C-terminal D3H41_13000 IPR006076 FAD dependent oxidoreductase D3H41_13005 IPR023714 Zinc transport protein ZntB D3H41_13005 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB D3H41_13025 IPR028082 Periplasmic binding protein-like I D3H41_13025 IPR000843 LacI-type HTH domain D3H41_13025 IPR010982 Lambda repressor-like, DNA-binding domain superfamily D3H41_13030 IPR005119 LysR, substrate-binding D3H41_13030 IPR000847 Transcription regulator HTH, LysR D3H41_13030 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_13030 IPR036390 Winged helix DNA-binding domain superfamily D3H41_13060 IPR022399 Helicase/secretion neighbourhood ATPase D3H41_13060 IPR001482 Type II/IV secretion system protein D3H41_13060 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_13090 IPR014004 Transport-associated and nodulation domain, bacteria D3H41_13090 IPR007055 BON domain D3H41_13090 IPR004846 Type II/III secretion system D3H41_13090 IPR032789 Pilus formation protein, N-terminal D3H41_13090 IPR001775 GspD/PilQ family D3H41_13115 IPR035451 Ada-like domain superfamily D3H41_13115 IPR004026 Ada DNA repair, metal-binding D3H41_13115 IPR009057 Homeobox-like domain superfamily D3H41_13115 IPR018060 DNA binding HTH domain, AraC-type D3H41_13115 IPR018062 HTH domain AraC-type, conserved site D3H41_13115 IPR016220 Methylphosphotriester-DNA alkyltransferase, AdaA D3H41_13120 IPR020845 AMP-binding, conserved site D3H41_13120 IPR000873 AMP-dependent synthetase/ligase D3H41_13120 IPR042099 AMP-dependent synthetase-like superfamily D3H41_13130 IPR036390 Winged helix DNA-binding domain superfamily D3H41_13130 IPR005119 LysR, substrate-binding D3H41_13130 IPR000847 Transcription regulator HTH, LysR D3H41_13130 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_13135 IPR000640 Elongation factor EFG, domain V-like D3H41_13135 IPR035649 EFG, domain V D3H41_13135 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D3H41_13135 IPR005225 Small GTP-binding protein domain D3H41_13135 IPR005517 Translation elongation factor EFG/EF2, domain IV D3H41_13135 IPR004540 Translation elongation factor EFG/EF2 D3H41_13135 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_13135 IPR031157 Tr-type G domain, conserved site D3H41_13135 IPR004161 Translation elongation factor EFTu-like, domain 2 D3H41_13135 IPR020568 Ribosomal protein S5 domain 2-type fold D3H41_13135 IPR000795 Transcription factor, GTP-binding domain D3H41_13135 IPR041095 Elongation Factor G, domain II D3H41_13135 IPR009022 Elongation factor G, domain III D3H41_13135 IPR035647 EF-G domain III/V-like D3H41_13135 IPR009000 Translation protein, beta-barrel domain superfamily D3H41_13140 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain D3H41_13140 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D3H41_13140 IPR004504 DNA repair protein RadA D3H41_13140 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_13140 IPR020568 Ribosomal protein S5 domain 2-type fold D3H41_13140 IPR003593 AAA+ ATPase domain D3H41_13140 IPR041166 LapB, rubredoxin metal binding domain D3H41_13150 IPR023190 Phosphoserine phosphatase, domain 2 D3H41_13150 IPR023214 HAD superfamily D3H41_13150 IPR036412 HAD-like superfamily D3H41_13150 IPR041449 Phosphoserine phosphatase, N-terminal D3H41_13160 IPR018016 Nucleoside phosphorylase, conserved site D3H41_13160 IPR000845 Nucleoside phosphorylase domain D3H41_13160 IPR035994 Nucleoside phosphorylase superfamily D3H41_13160 IPR004402 Purine nucleoside phosphorylase DeoD-type D3H41_13165 IPR006124 Metalloenzyme D3H41_13165 IPR010045 Phosphopentomutase D3H41_13165 IPR017850 Alkaline-phosphatase-like, core domain superfamily D3H41_13165 IPR024052 Phosphopentomutase DeoB cap domain superfamily D3H41_13170 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase D3H41_13170 IPR013465 Thymidine phosphorylase D3H41_13170 IPR000312 Glycosyl transferase, family 3 D3H41_13170 IPR017459 Glycosyl transferase family 3, N-terminal domain D3H41_13170 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily D3H41_13170 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal D3H41_13170 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic D3H41_13170 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site D3H41_13170 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily D3H41_13170 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily D3H41_13175 IPR002915 DeoC/FbaB/ lacD aldolase D3H41_13175 IPR011343 Deoxyribose-phosphate aldolase D3H41_13175 IPR023649 Deoxyribose-phosphate aldolase type II D3H41_13175 IPR013785 Aldolase-type TIM barrel D3H41_13180 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain D3H41_13180 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial D3H41_13180 IPR002668 Concentrative nucleoside transporter N-terminal domain D3H41_13180 IPR008276 Concentrative nucleoside transporter D3H41_13180 IPR011657 Concentrative nucleoside transporter C-terminal domain D3H41_13185 IPR018228 Deoxyribonuclease, TatD-related, conserved site D3H41_13185 IPR032466 Metal-dependent hydrolase D3H41_13185 IPR001130 TatD family D3H41_13195 IPR035647 EF-G domain III/V-like D3H41_13195 IPR004548 Peptide chain release factor 3 D3H41_13195 IPR004161 Translation elongation factor EFTu-like, domain 2 D3H41_13195 IPR031157 Tr-type G domain, conserved site D3H41_13195 IPR032090 Peptide chain release factor 3, C-terminal D3H41_13195 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily D3H41_13195 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_13195 IPR005225 Small GTP-binding protein domain D3H41_13195 IPR041732 Peptide chain release factor 3, GTP-binding domain D3H41_13195 IPR000795 Transcription factor, GTP-binding domain D3H41_13195 IPR009000 Translation protein, beta-barrel domain superfamily D3H41_13215 IPR000182 GNAT domain D3H41_13215 IPR016181 Acyl-CoA N-acyltransferase D3H41_13230 IPR000160 GGDEF domain D3H41_13230 IPR029787 Nucleotide cyclase D3H41_13230 IPR005330 MHYT domain D3H41_13230 IPR035919 EAL domain superfamily D3H41_13230 IPR001633 EAL domain D3H41_13245 IPR002528 Multi antimicrobial extrusion protein D3H41_13255 IPR019734 Tetratricopeptide repeat D3H41_13255 IPR013105 Tetratricopeptide repeat 2 D3H41_13255 IPR011990 Tetratricopeptide-like helical domain superfamily D3H41_13255 IPR013026 Tetratricopeptide repeat-containing domain D3H41_13255 IPR023605 Lipoprotein NlpI D3H41_13260 IPR015847 Exoribonuclease, phosphorolytic domain 2 D3H41_13260 IPR036345 Exoribonuclease, PH domain 2 superfamily D3H41_13260 IPR004087 K Homology domain D3H41_13260 IPR004088 K Homology domain, type 1 D3H41_13260 IPR003029 S1 domain D3H41_13260 IPR012340 Nucleic acid-binding, OB-fold D3H41_13260 IPR012162 Polyribonucleotide nucleotidyltransferase D3H41_13260 IPR027408 PNPase/RNase PH domain superfamily D3H41_13260 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain D3H41_13260 IPR020568 Ribosomal protein S5 domain 2-type fold D3H41_13260 IPR022967 RNA-binding domain, S1 D3H41_13260 IPR036612 K Homology domain, type 1 superfamily D3H41_13260 IPR001247 Exoribonuclease, phosphorolytic domain 1 D3H41_13265 IPR005290 Ribosomal protein S15, bacterial-type D3H41_13265 IPR000589 Ribosomal protein S15 D3H41_13265 IPR009068 S15/NS1, RNA-binding D3H41_13270 IPR032819 tRNA pseudouridylate synthase B, C-terminal D3H41_13270 IPR002501 Pseudouridine synthase II, N-terminal D3H41_13270 IPR020103 Pseudouridine synthase, catalytic domain superfamily D3H41_13270 IPR014780 tRNA pseudouridine synthase II, TruB D3H41_13270 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal D3H41_13270 IPR036974 PUA domain superfamily D3H41_13270 IPR015947 PUA-like superfamily D3H41_13275 IPR023799 Ribosome-binding factor A domain superfamily D3H41_13275 IPR015946 K homology domain-like, alpha/beta D3H41_13275 IPR000238 Ribosome-binding factor A D3H41_13275 IPR020053 Ribosome-binding factor A, conserved site D3H41_13280 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_13280 IPR000178 Translation initiation factor aIF-2, bacterial-like D3H41_13280 IPR006847 Translation initiation factor IF-2, N-terminal D3H41_13280 IPR013575 Initiation factor 2 associated domain, bacterial D3H41_13280 IPR005225 Small GTP-binding protein domain D3H41_13280 IPR015760 Translation initiation factor IF- 2 D3H41_13280 IPR000795 Transcription factor, GTP-binding domain D3H41_13280 IPR009000 Translation protein, beta-barrel domain superfamily D3H41_13280 IPR023115 Translation initiation factor IF- 2, domain 3 D3H41_13280 IPR036925 Translation initiation factor IF-2, domain 3 superfamily D3H41_13280 IPR009061 Putative DNA-binding domain superfamily D3H41_13285 IPR015946 K homology domain-like, alpha/beta D3H41_13285 IPR030842 Transcription termination/antitermination protein NusA, bacterial D3H41_13285 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical D3H41_13285 IPR009019 K homology domain superfamily, prokaryotic type D3H41_13285 IPR012340 Nucleic acid-binding, OB-fold D3H41_13285 IPR025249 KH domain, NusA-like D3H41_13285 IPR036555 NusA, N-terminal domain superfamily D3H41_13285 IPR022967 RNA-binding domain, S1 D3H41_13285 IPR003029 S1 domain D3H41_13285 IPR013735 Transcription factor NusA, N-terminal D3H41_13285 IPR010214 Transcription termination factor NusA, C-terminal duplication D3H41_13285 IPR010213 Transcription termination factor NusA D3H41_13290 IPR003728 Ribosome maturation factor RimP D3H41_13290 IPR028998 Ribosome maturation factor RimP, C-terminal D3H41_13290 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily D3H41_13290 IPR035956 RimP, N-terminal domain superfamily D3H41_13290 IPR028989 Ribosome maturation factor RimP, N-terminal D3H41_13305 IPR004692 Preprotein translocase SecG subunit D3H41_13315 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II D3H41_13315 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III D3H41_13315 IPR005843 Alpha-D-phosphohexomutase, C-terminal D3H41_13315 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily D3H41_13315 IPR016066 Alpha-D-phosphohexomutase, conserved site D3H41_13315 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I D3H41_13315 IPR005841 Alpha-D-phosphohexomutase superfamily D3H41_13315 IPR006352 Phosphoglucosamine mutase, bacterial type D3H41_13315 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III D3H41_13320 IPR000489 Pterin-binding domain D3H41_13320 IPR011005 Dihydropteroate synthase-like D3H41_13320 IPR006390 Dihydropteroate synthase D3H41_13325 IPR041569 AAA ATPase, AAA+ lid domain D3H41_13325 IPR003593 AAA+ ATPase domain D3H41_13325 IPR037219 Peptidase M41-like D3H41_13325 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_13325 IPR011546 Peptidase M41, FtsH extracellular D3H41_13325 IPR000642 Peptidase M41 D3H41_13325 IPR003959 ATPase, AAA-type, core D3H41_13325 IPR003960 ATPase, AAA-type, conserved site D3H41_13325 IPR005936 Peptidase, FtsH D3H41_13330 IPR015507 Ribosomal RNA large subunit methyltransferase E D3H41_13330 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3H41_13330 IPR002877 Ribosomal RNA methyltransferase FtsJ domain D3H41_13335 IPR017924 RNA-binding protein YhbY D3H41_13335 IPR035920 YhbY-like superfamily D3H41_13335 IPR001890 RNA-binding, CRM domain D3H41_13340 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal D3H41_13340 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily D3H41_13340 IPR018151 Transcription elongation factor, GreA/GreB, conserved site D3H41_13340 IPR028624 Transcription elongation factor GreA/GreB D3H41_13340 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal D3H41_13340 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily D3H41_13340 IPR006359 Transcription elongation factor GreA D3H41_13340 IPR023459 Transcription elongation factor GreA/GreB family D3H41_13345 IPR033900 Porin domain, Gram-negative type D3H41_13345 IPR023614 Porin domain superfamily D3H41_13350 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C D3H41_13350 IPR012338 Beta-lactamase/transpeptidase-like D3H41_13360 IPR024088 Tyrosine-tRNA ligase, bacterial-type D3H41_13360 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 D3H41_13360 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site D3H41_13360 IPR002305 Aminoacyl-tRNA synthetase, class Ic D3H41_13360 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3H41_13360 IPR002942 RNA-binding S4 domain D3H41_13360 IPR036986 RNA-binding S4 domain superfamily D3H41_13360 IPR002307 Tyrosine-tRNA ligase D3H41_13365 IPR013731 Opacity-associated protein A, N-terminal D3H41_13365 IPR018392 LysM domain D3H41_13365 IPR011055 Duplicated hybrid motif D3H41_13365 IPR016047 Peptidase M23 D3H41_13370 IPR022831 Multidrug resistance protein MdtB D3H41_13370 IPR001036 Acriflavin resistance protein D3H41_13370 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D3H41_13380 IPR023063 FeS cluster insertion protein ErpA D3H41_13380 IPR016092 FeS cluster insertion protein D3H41_13380 IPR000361 FeS cluster biogenesis D3H41_13380 IPR017870 FeS cluster insertion, C-terminal, conserved site D3H41_13380 IPR035903 HesB-like domain superfamily D3H41_13385 IPR015424 Pyridoxal phosphate-dependent transferase D3H41_13385 IPR005814 Aminotransferase class-III D3H41_13385 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase D3H41_13385 IPR015421 Pyridoxal phosphate-dependent transferase, major domain D3H41_13385 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 D3H41_13390 IPR002549 Transmembrane protein TqsA-like D3H41_13395 IPR002052 DNA methylase, N-6 adenine-specific, conserved site D3H41_13395 IPR013675 Methyltransferase small, N-terminal D3H41_13395 IPR007848 Methyltransferase small domain D3H41_13395 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3H41_13395 IPR023543 rRNA small subunit methyltransferase C D3H41_13400 IPR001789 Signal transduction response regulator, receiver domain D3H41_13400 IPR004358 Signal transduction histidine kinase-related protein, C-terminal D3H41_13400 IPR029151 Periplasmic sensor-like domain superfamily D3H41_13400 IPR035965 PAS domain superfamily D3H41_13400 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily D3H41_13400 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain D3H41_13400 IPR005467 Histidine kinase domain D3H41_13400 IPR011006 CheY-like superfamily D3H41_13400 IPR015387 LuxQ, periplasmic D3H41_13400 IPR003594 Histidine kinase/HSP90-like ATPase D3H41_13400 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3H41_13405 IPR030678 Peptide/nickel binding protein, MppA-type D3H41_13405 IPR039424 Solute-binding protein family 5 D3H41_13405 IPR023765 Solute-binding protein family 5, conserved site D3H41_13405 IPR000914 Solute-binding protein family 5 domain D3H41_13410 IPR035906 MetI-like superfamily D3H41_13410 IPR000515 ABC transporter type 1, transmembrane domain MetI-like D3H41_13415 IPR000515 ABC transporter type 1, transmembrane domain MetI-like D3H41_13415 IPR035906 MetI-like superfamily D3H41_13415 IPR025966 Oligopeptide transport permease C-like, N-terminal domain D3H41_13420 IPR003593 AAA+ ATPase domain D3H41_13420 IPR003439 ABC transporter-like D3H41_13420 IPR017871 ABC transporter, conserved site D3H41_13420 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal D3H41_13420 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_13425 IPR003593 AAA+ ATPase domain D3H41_13425 IPR017871 ABC transporter, conserved site D3H41_13425 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal D3H41_13425 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_13425 IPR003439 ABC transporter-like D3H41_13435 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type D3H41_13440 IPR029018 Beta-hexosaminidase-like, domain 2 D3H41_13440 IPR017853 Glycoside hydrolase superfamily D3H41_13440 IPR015883 Glycoside hydrolase family 20, catalytic domain D3H41_13440 IPR025705 Beta-hexosaminidase D3H41_13440 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal D3H41_13445 IPR012341 Six-hairpin glycosidase-like superfamily D3H41_13445 IPR009342 Putative carbohydrate binding domain D3H41_13445 IPR011013 Galactose mutarotase-like domain superfamily D3H41_13445 IPR033432 Glycosyl hydrolase 36, catalytic domain D3H41_13445 IPR037828 N,N'-diacetylchitobiose phosphorylase, N-terminal D3H41_13445 IPR010383 Glycosyl hydrolase 94 D3H41_13445 IPR008928 Six-hairpin glycosidase superfamily D3H41_13445 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily D3H41_13450 IPR005841 Alpha-D-phosphohexomutase superfamily D3H41_13450 IPR016066 Alpha-D-phosphohexomutase, conserved site D3H41_13450 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily D3H41_13450 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I D3H41_13450 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III D3H41_13450 IPR005843 Alpha-D-phosphohexomutase, C-terminal D3H41_13450 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II D3H41_13450 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III D3H41_13455 IPR013611 Transport-associated OB, type 2 D3H41_13455 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_13455 IPR008995 Molybdate/tungstate binding, C-terminal D3H41_13455 IPR015853 ABC transporter, ferric cation import, FbpC D3H41_13455 IPR017871 ABC transporter, conserved site D3H41_13455 IPR003439 ABC transporter-like D3H41_13455 IPR003593 AAA+ ATPase domain D3H41_13465 IPR006059 Bacterial extracellular solute-binding protein D3H41_13465 IPR026045 Ferric binding protein D3H41_13470 IPR024041 Ammonium transporter AmtB-like domain D3H41_13470 IPR018047 Ammonium transporter, conserved site D3H41_13470 IPR001905 Ammonium transporter D3H41_13470 IPR029020 Ammonium/urea transporter D3H41_13475 IPR011322 Nitrogen regulatory PII-like, alpha/beta D3H41_13475 IPR002332 Nitrogen regulatory protein P-II, urydylation site D3H41_13475 IPR017918 Nitrogen regulatory protein PII, conserved site D3H41_13475 IPR002187 Nitrogen regulatory protein PII D3H41_13475 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal D3H41_13480 IPR008249 Uncharacterised protein family UPF0231 D3H41_13485 IPR036288 Aconitase B, HEAT-like domain superfamily D3H41_13485 IPR015932 Aconitase, domain 2 D3H41_13485 IPR015933 Aconitase B, HEAT-like domain D3H41_13485 IPR004406 Aconitase B D3H41_13485 IPR036008 Aconitase, iron-sulfur domain D3H41_13485 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 D3H41_13485 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain D3H41_13485 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel D3H41_13485 IPR018136 Aconitase family, 4Fe-4S cluster binding site D3H41_13485 IPR015929 Aconitase B, swivel D3H41_13490 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase D3H41_13490 IPR001423 Lysophospholipase patatin, conserved site D3H41_13490 IPR002641 Patatin-like phospholipase domain D3H41_13495 IPR001460 Penicillin-binding protein, transpeptidase D3H41_13495 IPR028166 Bifunctional transglycosylase second domain D3H41_13495 IPR012338 Beta-lactamase/transpeptidase-like D3H41_13495 IPR036950 Penicillin binding protein transglycosylase domain D3H41_13495 IPR011813 Penicillin-binding protein 1B D3H41_13495 IPR023346 Lysozyme-like domain superfamily D3H41_13495 IPR001264 Glycosyl transferase, family 51 D3H41_13500 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal D3H41_13500 IPR011545 DEAD/DEAH box helicase domain D3H41_13500 IPR007502 Helicase-associated domain D3H41_13500 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_13500 IPR010225 ATP-dependent helicase HrpB D3H41_13500 IPR001650 Helicase, C-terminal D3H41_13500 IPR014001 Helicase superfamily 1/2, ATP-binding domain D3H41_13505 IPR041465 SfsA, N-terminal OB domain D3H41_13505 IPR005224 Sugar fermentation stimulation protein D3H41_13505 IPR040452 Sugar fermentation stimulation protein, C-terminal D3H41_13510 IPR037187 DksA, N-terminal domain superfamily D3H41_13510 IPR012784 RNA polymerase-binding transcription factor DksA D3H41_13510 IPR000962 Zinc finger, DksA/TraR C4-type D3H41_13510 IPR020458 Zinc finger, DksA/TraR C4-type conserved site D3H41_13510 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria D3H41_13515 IPR022380 Glutamyl-Q tRNA(Asp) synthetase D3H41_13515 IPR000924 Glutamyl/glutaminyl-tRNA synthetase D3H41_13515 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain D3H41_13515 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3H41_13520 IPR010206 Poly(A) polymerase I D3H41_13520 IPR025866 Polymerase A arginine-rich C-terminal domain D3H41_13520 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain D3H41_13520 IPR002646 Poly A polymerase, head domain D3H41_13525 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily D3H41_13525 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK D3H41_13530 IPR040442 Pyruvate kinase-like domain superfamily D3H41_13530 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily D3H41_13530 IPR003700 Ketopantoate hydroxymethyltransferase D3H41_13535 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3H41_13535 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain D3H41_13535 IPR003721 Pantoate-beta-alanine ligase D3H41_13535 IPR004821 Cytidyltransferase-like domain D3H41_13540 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase D3H41_13540 IPR004960 Bacterial lipid A biosynthesis acyltransferase D3H41_13550 IPR000412 ABC-2 transporter D3H41_13550 IPR013525 ABC-2 type transporter D3H41_13555 IPR003439 ABC transporter-like D3H41_13555 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_13555 IPR017871 ABC transporter, conserved site D3H41_13555 IPR003593 AAA+ ATPase domain D3H41_13560 IPR036513 STAS domain superfamily D3H41_13560 IPR002645 STAS domain D3H41_13560 IPR001902 SLC26A/SulP transporter D3H41_13560 IPR011547 SLC26A/SulP transporter domain D3H41_13565 IPR001765 Carbonic anhydrase D3H41_13565 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site D3H41_13565 IPR036874 Carbonic anhydrase superfamily D3H41_13570 IPR029057 Phosphoribosyltransferase-like D3H41_13570 IPR000836 Phosphoribosyltransferase domain D3H41_13570 IPR005904 Hypoxanthine phosphoribosyl transferase D3H41_13575 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily D3H41_13575 IPR001647 DNA-binding HTH domain, TetR-type D3H41_13575 IPR009057 Homeobox-like domain superfamily D3H41_13580 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site D3H41_13580 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D3H41_13580 IPR006258 Dihydrolipoamide dehydrogenase D3H41_13580 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily D3H41_13580 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I D3H41_13580 IPR036188 FAD/NAD(P)-binding domain superfamily D3H41_13580 IPR023753 FAD/NAD(P)-binding domain D3H41_13585 IPR000089 Biotin/lipoyl attachment D3H41_13585 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex D3H41_13585 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain D3H41_13585 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site D3H41_13585 IPR036625 E3-binding domain superfamily D3H41_13585 IPR004167 Peripheral subunit-binding domain D3H41_13585 IPR011053 Single hybrid motif D3H41_13585 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily D3H41_13590 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II D3H41_13590 IPR004660 Pyruvate dehydrogenase E1 component D3H41_13590 IPR029061 Thiamin diphosphate-binding fold D3H41_13590 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal D3H41_13590 IPR041621 Pyruvate dehydrogenase E1 component, middle domain D3H41_13590 IPR005474 Transketolase, N-terminal D3H41_13595 IPR008920 Transcription regulator FadR/GntR, C-terminal D3H41_13595 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_13595 IPR036390 Winged helix DNA-binding domain superfamily D3H41_13595 IPR011711 GntR, C-terminal D3H41_13595 IPR000524 Transcription regulator HTH, GntR D3H41_13600 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily D3H41_13600 IPR002502 N-acetylmuramoyl-L-alanine amidase domain D3H41_13605 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal D3H41_13605 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily D3H41_13605 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal D3H41_13605 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD D3H41_13605 IPR004393 Nicotinate-nucleotide pyrophosphorylase D3H41_13605 IPR013785 Aldolase-type TIM barrel D3H41_13605 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal D3H41_13610 IPR001082 Fimbrial protein pilin D3H41_13610 IPR012902 Prokaryotic N-terminal methylation site D3H41_13615 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_13615 IPR042181 Type II secretion system, protein E, N-terminal D3H41_13615 IPR007831 General secretory system II, protein E, N-terminal D3H41_13615 IPR037257 General secretory system II, protein E, N-terminal superfamily D3H41_13615 IPR013374 ATPase, type IV, pilus assembly, PilB D3H41_13615 IPR001482 Type II/IV secretion system protein D3H41_13620 IPR001992 Type II secretion system conserved site D3H41_13620 IPR042094 Type II secretion system F domain superfamily D3H41_13620 IPR018076 Type II secretion system F domain D3H41_13620 IPR003004 GspF/PilC family D3H41_13625 IPR000045 Prepilin type IV endopeptidase, peptidase domain D3H41_13625 IPR014032 Peptidase A24A, prepilin type IV, bacterial D3H41_13625 IPR010627 Peptidase A24A, N-terminal D3H41_13630 IPR001977 Dephospho-CoA kinase D3H41_13630 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_13635 IPR027462 Z ring-associated protein D, C-terminal D3H41_13635 IPR036268 ZapD domain superfamily D3H41_13635 IPR009777 Cell division protein ZapD D3H41_13640 IPR013088 Zinc finger, NHR/GATA-type D3H41_13640 IPR005584 DNA gyrase inhibitor YacG D3H41_13650 IPR018257 Ribosomal protein L19, conserved site D3H41_13650 IPR038657 Ribosomal protein L19 superfamily D3H41_13650 IPR008991 Translation protein SH3-like domain superfamily D3H41_13650 IPR001857 Ribosomal protein L19 D3H41_13655 IPR029028 Alpha/beta knot methyltransferases D3H41_13655 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria D3H41_13655 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal D3H41_13655 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain D3H41_13655 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal D3H41_13660 IPR027275 PRC-barrel domain D3H41_13660 IPR009000 Translation protein, beta-barrel domain superfamily D3H41_13660 IPR011961 16S rRNA processing protein RimM D3H41_13660 IPR011033 PRC-barrel-like superfamily D3H41_13660 IPR002676 RimM, N-terminal D3H41_13660 IPR036976 RimM, N-terminal domain superfamily D3H41_13665 IPR000307 Ribosomal protein S16 D3H41_13665 IPR020592 Ribosomal protein S16, conserved site D3H41_13665 IPR023803 Ribosomal protein S16 domain superfamily D3H41_13670 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_13670 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain D3H41_13670 IPR022941 Signal recognition particle, SRP54 subunit D3H41_13670 IPR004780 Signal recognition particle protein D3H41_13670 IPR004125 Signal recognition particle, SRP54 subunit, M-domain D3H41_13670 IPR013822 Signal recognition particle SRP54, helical bundle D3H41_13670 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily D3H41_13670 IPR003593 AAA+ ATPase domain D3H41_13670 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily D3H41_13675 IPR002541 Cytochrome c assembly protein D3H41_13680 IPR005170 Transporter-associated domain D3H41_13680 IPR002550 CNNM, transmembrane domain D3H41_13680 IPR016169 FAD-binding, type PCMH, subdomain 2 D3H41_13680 IPR036318 FAD-binding, type PCMH-like superfamily D3H41_13680 IPR000644 CBS domain D3H41_13685 IPR003815 S-ribosylhomocysteinase (LuxS) D3H41_13685 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily D3H41_13685 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like D3H41_13695 IPR006334 Glutamate--cysteine ligase, monofunctional D3H41_13695 IPR007370 Glutamate--cysteine ligase D3H41_13695 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain D3H41_13700 IPR001431 Peptidase M16, zinc-binding site D3H41_13700 IPR011765 Peptidase M16, N-terminal D3H41_13700 IPR007863 Peptidase M16, C-terminal D3H41_13700 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like D3H41_13705 IPR032816 SNARE associated Golgi protein D3H41_13715 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit D3H41_13720 IPR011053 Single hybrid motif D3H41_13720 IPR000891 Pyruvate carboxyltransferase D3H41_13720 IPR005776 Oxaloacetate decarboxylase, alpha subunit D3H41_13720 IPR003379 Carboxylase, conserved domain D3H41_13720 IPR000089 Biotin/lipoyl attachment D3H41_13720 IPR013785 Aldolase-type TIM barrel D3H41_13720 IPR001882 Biotin-binding site D3H41_13725 IPR005899 Sodium ion-translocating decarboxylase D3H41_13725 IPR023424 Oxaloacetate decarboxylase gamma chain, probable D3H41_13780 IPR036107 Carbon storage regulator superfamily D3H41_13780 IPR003751 Translational regulator CsrA D3H41_13785 IPR027795 CASTOR, ACT domain D3H41_13785 IPR018042 Aspartate kinase, conserved site D3H41_13785 IPR001341 Aspartate kinase D3H41_13785 IPR036393 Acetylglutamate kinase-like superfamily D3H41_13785 IPR002912 ACT domain D3H41_13785 IPR041740 Aspartokinase catalytic domain D3H41_13785 IPR005260 Aspartate kinase, monofunctional class D3H41_13785 IPR001048 Aspartate/glutamate/uridylate kinase D3H41_13790 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain D3H41_13790 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal D3H41_13790 IPR012947 Threonyl/alanyl tRNA synthetase, SAD D3H41_13790 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria D3H41_13790 IPR003156 DHHA1 domain D3H41_13790 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily D3H41_13790 IPR009000 Translation protein, beta-barrel domain superfamily D3H41_13790 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily D3H41_13790 IPR002318 Alanine-tRNA ligase, class IIc D3H41_13795 IPR003783 Regulatory protein RecX D3H41_13795 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_13805 IPR003593 AAA+ ATPase domain D3H41_13805 IPR023400 DNA recombination and repair protein RecA, C-terminal D3H41_13805 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain D3H41_13805 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_13805 IPR020584 DNA recombination/repair protein RecA, conserved site D3H41_13805 IPR013765 DNA recombination and repair protein RecA D3H41_13805 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface D3H41_13810 IPR008136 CinA, C-terminal D3H41_13810 IPR036653 CinA-like, C-terminal D3H41_13815 IPR016151 DNA mismatch repair protein MutS, N-terminal D3H41_13815 IPR007861 DNA mismatch repair protein MutS, clamp D3H41_13815 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_13815 IPR036678 MutS, connector domain superfamily D3H41_13815 IPR005748 DNA mismatch repair protein MutS D3H41_13815 IPR007860 DNA mismatch repair protein MutS, connector domain D3H41_13815 IPR036187 DNA mismatch repair protein MutS, core domain superfamily D3H41_13815 IPR007696 DNA mismatch repair protein MutS, core D3H41_13815 IPR000432 DNA mismatch repair protein MutS, C-terminal D3H41_13815 IPR017261 DNA mismatch repair protein MutS/MSH D3H41_13815 IPR007695 DNA mismatch repair protein MutS-like, N-terminal D3H41_13820 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_13820 IPR012761 RNA polymerase sigma factor RpoS D3H41_13820 IPR013325 RNA polymerase sigma factor, region 2 D3H41_13820 IPR007624 RNA polymerase sigma-70 region 3 D3H41_13820 IPR007627 RNA polymerase sigma-70 region 2 D3H41_13820 IPR009042 RNA polymerase sigma-70 region 1.2 D3H41_13820 IPR000943 RNA polymerase sigma-70 D3H41_13820 IPR014284 RNA polymerase sigma-70 like domain D3H41_13820 IPR013324 RNA polymerase sigma factor, region 3/4-like D3H41_13820 IPR007630 RNA polymerase sigma-70 region 4 D3H41_13825 IPR011055 Duplicated hybrid motif D3H41_13825 IPR018392 LysM domain D3H41_13825 IPR036779 LysM domain superfamily D3H41_13825 IPR016047 Peptidase M23 D3H41_13830 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3H41_13830 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase D3H41_13835 IPR030048 Survival protein SurE D3H41_13835 IPR036523 SurE-like phosphatase/nucleotidase superfamily D3H41_13835 IPR002828 Survival protein SurE-like phosphatase/nucleotidase D3H41_13840 IPR001656 Pseudouridine synthase, TruD D3H41_13840 IPR020119 Pseudouridine synthase TruD, conserved site D3H41_13840 IPR011760 Pseudouridine synthase, TruD, insertion domain D3H41_13840 IPR042214 Pseudouridine synthase, TruD, catalytic domain D3H41_13840 IPR020103 Pseudouridine synthase, catalytic domain superfamily D3H41_13845 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site D3H41_13845 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase D3H41_13845 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily D3H41_13850 IPR029044 Nucleotide-diphospho-sugar transferases D3H41_13850 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site D3H41_13850 IPR034683 Cytidylyltransferase IspD/TarI D3H41_13850 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase D3H41_13855 IPR007060 Septum formation initiator FtsL/DivIC D3H41_13855 IPR023081 Cell division protein FtsB D3H41_13860 IPR036849 Enolase-like, C-terminal domain superfamily D3H41_13860 IPR029017 Enolase-like, N-terminal D3H41_13860 IPR000941 Enolase D3H41_13860 IPR020810 Enolase, C-terminal TIM barrel domain D3H41_13860 IPR020811 Enolase, N-terminal D3H41_13860 IPR020809 Enolase, conserved site D3H41_13865 IPR029062 Class I glutamine amidotransferase-like D3H41_13865 IPR017926 Glutamine amidotransferase D3H41_13865 IPR004468 CTP synthase D3H41_13865 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_13865 IPR033828 CTP synthase GATase domain D3H41_13865 IPR017456 CTP synthase, N-terminal D3H41_13870 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core D3H41_13870 IPR011551 NTP pyrophosphohydrolase MazG D3H41_13875 IPR004811 RelA/SpoT family D3H41_13875 IPR007685 RelA/SpoT D3H41_13875 IPR004095 TGS D3H41_13875 IPR003607 HD/PDEase domain D3H41_13875 IPR012675 Beta-grasp domain superfamily D3H41_13875 IPR033655 RelA, TGS domain D3H41_13875 IPR012676 TGS-like D3H41_13875 IPR002912 ACT domain D3H41_13885 IPR030390 RNA methyltransferase TrmA, active site D3H41_13885 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3H41_13885 IPR012340 Nucleic acid-binding, OB-fold D3H41_13885 IPR010280 (Uracil-5)-methyltransferase family D3H41_13885 IPR002792 TRAM domain D3H41_13885 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD D3H41_13885 IPR030391 RNA methyltransferase TrmA, conserved site D3H41_13895 IPR005467 Histidine kinase domain D3H41_13895 IPR001789 Signal transduction response regulator, receiver domain D3H41_13895 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily D3H41_13895 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain D3H41_13895 IPR011006 CheY-like superfamily D3H41_13895 IPR003594 Histidine kinase/HSP90-like ATPase D3H41_13895 IPR004358 Signal transduction histidine kinase-related protein, C-terminal D3H41_13895 IPR036641 HPT domain superfamily D3H41_13895 IPR003660 HAMP domain D3H41_13895 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain D3H41_13895 IPR019247 Histidine kinase BarA, N-terminal D3H41_13895 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3H41_13900 IPR008278 4'-phosphopantetheinyl transferase domain D3H41_13900 IPR004568 Phosphopantetheine-protein transferase domain D3H41_13900 IPR037143 4'-phosphopantetheinyl transferase domain superfamily D3H41_13900 IPR002582 Holo-[acyl carrier protein] synthase D3H41_13905 IPR013785 Aldolase-type TIM barrel D3H41_13905 IPR036130 Pyridoxine 5'-phosphate synthase D3H41_13905 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ D3H41_13910 IPR022572 DNA replication/recombination mediator RecO, N-terminal D3H41_13910 IPR012340 Nucleic acid-binding, OB-fold D3H41_13910 IPR003717 Recombination protein O, RecO D3H41_13910 IPR037278 ARFGAP/RecO-like zinc finger D3H41_13915 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_13915 IPR009019 K homology domain superfamily, prokaryotic type D3H41_13915 IPR005662 GTP-binding protein Era D3H41_13915 IPR004044 K Homology domain, type 2 D3H41_13915 IPR030388 Era-type guanine nucleotide-binding (G) domain D3H41_13915 IPR015946 K homology domain-like, alpha/beta D3H41_13915 IPR006073 GTP binding domain D3H41_13915 IPR005225 Small GTP-binding protein domain D3H41_13920 IPR014720 Double-stranded RNA-binding domain D3H41_13920 IPR011907 Ribonuclease III D3H41_13920 IPR000999 Ribonuclease III domain D3H41_13920 IPR036389 Ribonuclease III, endonuclease domain superfamily D3H41_13925 IPR019756 Peptidase S26A, signal peptidase I, serine active site D3H41_13925 IPR019533 Peptidase S26 D3H41_13925 IPR036286 LexA/Signal peptidase-like superfamily D3H41_13925 IPR019757 Peptidase S26A, signal peptidase I, lysine active site D3H41_13925 IPR019758 Peptidase S26A, signal peptidase I, conserved site D3H41_13925 IPR000223 Peptidase S26A, signal peptidase I D3H41_13930 IPR009000 Translation protein, beta-barrel domain superfamily D3H41_13930 IPR000795 Transcription factor, GTP-binding domain D3H41_13930 IPR005225 Small GTP-binding protein domain D3H41_13930 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_13930 IPR035654 Elongation factor 4, domain IV D3H41_13930 IPR006297 Elongation factor 4 D3H41_13930 IPR038363 LepA, C-terminal domain superfamily D3H41_13930 IPR031157 Tr-type G domain, conserved site D3H41_13930 IPR004161 Translation elongation factor EFTu-like, domain 2 D3H41_13930 IPR000640 Elongation factor EFG, domain V-like D3H41_13930 IPR013842 GTP-binding protein LepA, C-terminal D3H41_13930 IPR035647 EF-G domain III/V-like D3H41_13935 IPR007359 Positive regulator of sigma(E), RseC/MucC D3H41_13935 IPR026268 Protein RseC D3H41_13940 IPR005588 MucB/RseB D3H41_13940 IPR033434 MucB/RseB, N-terminal D3H41_13940 IPR038484 MucB/RseB, C-terminal domain superfamily D3H41_13940 IPR033436 MucB/RseB, C-terminal D3H41_13945 IPR026279 Sigma-E factor negative regulatory protein RseA D3H41_13945 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily D3H41_13945 IPR005572 Anti sigma-E protein RseA, N-terminal D3H41_13945 IPR005573 Anti sigma-E protein RseA, C-terminal D3H41_13950 IPR007627 RNA polymerase sigma-70 region 2 D3H41_13950 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_13950 IPR013324 RNA polymerase sigma factor, region 3/4-like D3H41_13950 IPR013325 RNA polymerase sigma factor, region 2 D3H41_13950 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site D3H41_13950 IPR014284 RNA polymerase sigma-70 like domain D3H41_13950 IPR014286 RNA polymerase sigma-70 RpoE type D3H41_13950 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 D3H41_13950 IPR039425 RNA polymerase sigma-70 like D3H41_13960 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily D3H41_13960 IPR005288 L-aspartate oxidase D3H41_13960 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal D3H41_13960 IPR036188 FAD/NAD(P)-binding domain superfamily D3H41_13960 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain D3H41_13960 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily D3H41_13970 IPR036714 Flavinator of succinate dehydrogenase superfamily D3H41_13970 IPR005631 Flavinator of succinate dehydrogenase D3H41_13975 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal D3H41_13975 IPR023758 tRNA-modifying protein YgfZ D3H41_13975 IPR017703 YgfZ/GcvT conserved site D3H41_13990 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 D3H41_13990 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site D3H41_13990 IPR036188 FAD/NAD(P)-binding domain superfamily D3H41_13990 IPR002938 FAD-binding domain D3H41_13995 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 D3H41_13995 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase D3H41_13995 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site D3H41_13995 IPR036188 FAD/NAD(P)-binding domain superfamily D3H41_13995 IPR002938 FAD-binding domain D3H41_14000 IPR011978 Uncharacterised protein family UPF0149 D3H41_14000 IPR036255 YgfB-like superfamily D3H41_14010 IPR007838 Cell division protein ZapA-like D3H41_14010 IPR036192 Cell division protein ZapA-like superfamily D3H41_14010 IPR023771 Cell division protein ZapA, eubacteria D3H41_14020 IPR002698 5-formyltetrahydrofolate cyclo-ligase D3H41_14020 IPR037171 NagB/RpiA transferase-like D3H41_14020 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily D3H41_14025 IPR037171 NagB/RpiA transferase-like D3H41_14025 IPR004788 Ribose 5-phosphate isomerase, type A D3H41_14025 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup D3H41_14030 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site D3H41_14030 IPR002912 ACT domain D3H41_14030 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 D3H41_14030 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D3H41_14030 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain D3H41_14030 IPR036291 NAD(P)-binding domain superfamily D3H41_14035 IPR007497 Protein of unknown function DUF541 D3H41_14040 IPR036390 Winged helix DNA-binding domain superfamily D3H41_14040 IPR005119 LysR, substrate-binding D3H41_14040 IPR000847 Transcription regulator HTH, LysR D3H41_14040 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria D3H41_14040 IPR017685 HTH-type transcriptional regulator ArgP D3H41_14040 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_14045 IPR004777 L-lysine exporter/arginine exporter D3H41_14045 IPR001123 Amino acid exporter protein, LeuE-type D3H41_14045 IPR023445 Arginine exporter protein ArgO, enterobacteria D3H41_14055 IPR023408 Mechanosensitive ion channel MscS domain superfamily D3H41_14055 IPR006685 Mechanosensitive ion channel MscS D3H41_14055 IPR011066 Mechanosensitive ion channel MscS, C-terminal D3H41_14055 IPR006686 Mechanosensitive ion channel MscS, conserved site D3H41_14055 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 D3H41_14055 IPR008910 Conserved TM helix D3H41_14055 IPR010920 LSM domain superfamily D3H41_14060 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype D3H41_14060 IPR013785 Aldolase-type TIM barrel D3H41_14060 IPR000771 Fructose-bisphosphate aldolase, class-II D3H41_14065 IPR036043 Phosphoglycerate kinase superfamily D3H41_14065 IPR015824 Phosphoglycerate kinase, N-terminal D3H41_14065 IPR015911 Phosphoglycerate kinase, conserved site D3H41_14065 IPR001576 Phosphoglycerate kinase D3H41_14070 IPR006422 D-erythrose-4-phosphate dehydrogenase D3H41_14070 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain D3H41_14070 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family D3H41_14070 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain D3H41_14070 IPR036291 NAD(P)-binding domain superfamily D3H41_14075 IPR010916 TonB box, conserved site D3H41_14075 IPR000531 TonB-dependent receptor-like, beta-barrel D3H41_14075 IPR010917 TonB-dependent receptor, conserved site D3H41_14075 IPR012910 TonB-dependent receptor, plug domain D3H41_14075 IPR039426 Vitamin B12 transporter BtuB-like D3H41_14075 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D3H41_14075 IPR037066 TonB-dependent receptor, plug domain superfamily D3H41_14080 IPR000847 Transcription regulator HTH, LysR D3H41_14080 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_14080 IPR036390 Winged helix DNA-binding domain superfamily D3H41_14080 IPR005119 LysR, substrate-binding D3H41_14085 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II D3H41_14085 IPR029061 Thiamin diphosphate-binding fold D3H41_14085 IPR005478 Transketolase, bacterial-like D3H41_14085 IPR020826 Transketolase binding site D3H41_14085 IPR005475 Transketolase-like, pyrimidine-binding domain D3H41_14085 IPR033247 Transketolase family D3H41_14085 IPR005474 Transketolase, N-terminal D3H41_14085 IPR033248 Transketolase, C-terminal domain D3H41_14095 IPR022631 S-adenosylmethionine synthetase, conserved site D3H41_14095 IPR022636 S-adenosylmethionine synthetase superfamily D3H41_14095 IPR022630 S-adenosylmethionine synthetase, C-terminal D3H41_14095 IPR002133 S-adenosylmethionine synthetase D3H41_14095 IPR022628 S-adenosylmethionine synthetase, N-terminal D3H41_14095 IPR022629 S-adenosylmethionine synthetase, central domain D3H41_14105 IPR006640 SprT-like D3H41_14105 IPR035240 SprT-like, zinc ribbon domain D3H41_14105 IPR023483 Uncharacterised protein family SprT D3H41_14110 IPR007346 Endonuclease I D3H41_14115 IPR015947 PUA-like superfamily D3H41_14115 IPR029028 Alpha/beta knot methyltransferases D3H41_14115 IPR006700 Ribosomal RNA small subunit methyltransferase E D3H41_14115 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal D3H41_14120 IPR004215 Prokaryotic glutathione synthetase, N-terminal D3H41_14120 IPR004218 Prokaryotic glutathione synthetase, ATP-binding D3H41_14120 IPR006284 Glutathione synthetase, prokaryotic D3H41_14120 IPR016185 Pre-ATP-grasp domain superfamily D3H41_14120 IPR013815 ATP-grasp fold, subdomain 1 D3H41_14120 IPR011761 ATP-grasp fold D3H41_14125 IPR003774 Protein of unknown function UPF0301 D3H41_14130 IPR037027 YqgF/RNase H-like domain superfamily D3H41_14130 IPR006641 YqgF/RNase H-like domain D3H41_14130 IPR005227 Putative pre-16S rRNA nuclease D3H41_14130 IPR012337 Ribonuclease H-like superfamily D3H41_14135 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_14135 IPR003593 AAA+ ATPase domain D3H41_14135 IPR006321 Pilus retraction protein PilT D3H41_14135 IPR001482 Type II/IV secretion system protein D3H41_14140 IPR001482 Type II/IV secretion system protein D3H41_14140 IPR006321 Pilus retraction protein PilT D3H41_14140 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_14140 IPR003593 AAA+ ATPase domain D3H41_14145 IPR029066 PLP-binding barrel D3H41_14145 IPR001608 Alanine racemase, N-terminal D3H41_14145 IPR011078 Pyridoxal phosphate homeostasis protein D3H41_14150 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain D3H41_14150 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal D3H41_14150 IPR000304 Pyrroline-5-carboxylate reductase D3H41_14150 IPR036291 NAD(P)-binding domain superfamily D3H41_14150 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily D3H41_14155 IPR003425 CCB3/YggT D3H41_14160 IPR005228 Conserved hypothetical protein CHP00251 D3H41_14160 IPR003746 Protein of unknown function DUF167 D3H41_14160 IPR036591 YggU-like superfamily D3H41_14170 IPR020922 dITP/XTP pyrophosphatase D3H41_14170 IPR029001 Inosine triphosphate pyrophosphatase-like D3H41_14170 IPR002637 Ham1-like protein D3H41_14175 IPR023404 Radical SAM, alpha/beta horseshoe D3H41_14175 IPR010723 HemN, C-terminal D3H41_14175 IPR007197 Radical SAM D3H41_14175 IPR004559 Heme chaperone HemW-like D3H41_14175 IPR006638 Elp3/MiaB/NifB D3H41_14175 IPR034505 Anaerobic coproporphyrinogen-III oxidase D3H41_14180 IPR015868 Glutaminase D3H41_14180 IPR012338 Beta-lactamase/transpeptidase-like D3H41_14185 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site D3H41_14185 IPR012327 D12 class N6 adenine-specific DNA methyltransferase D3H41_14185 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3H41_14190 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3H41_14190 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type D3H41_14195 IPR004035 Endonuclease III, iron-sulphur binding site D3H41_14195 IPR015797 NUDIX hydrolase-like domain superfamily D3H41_14195 IPR003265 HhH-GPD domain D3H41_14195 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal D3H41_14195 IPR000445 Helix-hairpin-helix motif D3H41_14195 IPR004036 Endonuclease III-like, conserved site-2 D3H41_14195 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif D3H41_14195 IPR029119 MutY, C-terminal D3H41_14195 IPR011257 DNA glycosylase D3H41_14195 IPR005760 A/G-specific adenine glycosylase MutY D3H41_14200 IPR007457 Fe(II) trafficking protein YggX D3H41_14200 IPR036766 Fe(II) trafficking protein YggX superfamily D3H41_14205 IPR024570 Murein transglycosylase-C, N-terminal D3H41_14205 IPR023664 Murein transglycosylase-C D3H41_14205 IPR008258 Transglycosylase SLT domain 1 D3H41_14205 IPR023346 Lysozyme-like domain superfamily D3H41_14205 IPR000189 Prokaryotic transglycosylase, active site D3H41_14245 IPR033480 Single Cache domain 2 D3H41_14245 IPR003660 HAMP domain D3H41_14245 IPR004090 Chemotaxis methyl-accepting receptor D3H41_14245 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain D3H41_14280 IPR010102 Succinate semialdehyde dehydrogenase D3H41_14280 IPR029510 Aldehyde dehydrogenase, glutamic acid active site D3H41_14280 IPR016160 Aldehyde dehydrogenase, cysteine active site D3H41_14280 IPR016163 Aldehyde dehydrogenase, C-terminal D3H41_14280 IPR016162 Aldehyde dehydrogenase, N-terminal D3H41_14280 IPR016161 Aldehyde/histidinol dehydrogenase D3H41_14280 IPR015590 Aldehyde dehydrogenase domain D3H41_14325 IPR003607 HD/PDEase domain D3H41_14325 IPR037522 HD-GYP domain D3H41_14335 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria D3H41_14335 IPR006879 Carbohydrate deacetylase YdjC-like D3H41_14335 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel D3H41_14340 IPR036291 NAD(P)-binding domain superfamily D3H41_14340 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal D3H41_14340 IPR019802 Glycoside hydrolase, family 4, conserved site D3H41_14340 IPR022616 Glycosyl hydrolase, family 4, C-terminal D3H41_14340 IPR001088 Glycoside hydrolase, family 4 D3H41_14345 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily D3H41_14345 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit D3H41_14350 IPR003352 Phosphotransferase system, EIIC D3H41_14350 IPR004796 Phosphotransferase system, cellobiose-type IIC component D3H41_14350 IPR004501 Phosphotransferase system, EIIC component, type 3 D3H41_14355 IPR013012 Phosphotransferase system, EIIB component, type 3 D3H41_14355 IPR003501 Phosphotransferase system, EIIB component, type 2/3 D3H41_14355 IPR036095 PTS system IIB component-like superfamily D3H41_14360 IPR003610 Carbohydrate-binding module family 5/12 D3H41_14360 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel D3H41_14360 IPR036573 Carbohydrate-binding module superfamily 5/12 D3H41_14360 IPR002509 NodB homology domain D3H41_14370 IPR036291 NAD(P)-binding domain superfamily D3H41_14370 IPR020904 Short-chain dehydrogenase/reductase, conserved site D3H41_14370 IPR002347 Short-chain dehydrogenase/reductase SDR D3H41_14375 IPR018723 Protein of unknown function DUF2254, membrane D3H41_14385 IPR005495 Permease LptG/LptF-related D3H41_14385 IPR030923 LPS export ABC transporter permease LptG D3H41_14390 IPR005495 Permease LptG/LptF-related D3H41_14390 IPR030922 LPS export ABC transporter permease LptF D3H41_14395 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal D3H41_14395 IPR023042 Peptidase M17, leucine aminopeptidase D3H41_14395 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B D3H41_14395 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal D3H41_14400 IPR036768 DNA polymerase III subunit chi superfamily D3H41_14400 IPR007459 DNA polymerase III chi subunit, HolC D3H41_14405 IPR002300 Aminoacyl-tRNA synthetase, class Ia D3H41_14405 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding D3H41_14405 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3H41_14405 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm D3H41_14405 IPR033705 Valyl tRNA synthetase, anticodon-binding domain D3H41_14405 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding D3H41_14405 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm D3H41_14405 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain D3H41_14405 IPR002303 Valine-tRNA ligase D3H41_14405 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily D3H41_14405 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site D3H41_14415 IPR000182 GNAT domain D3H41_14415 IPR016181 Acyl-CoA N-acyltransferase D3H41_14425 IPR016716 Regulator of ribonuclease activity B D3H41_14425 IPR036701 RraB-like superfamily D3H41_14425 IPR009671 Regulator of ribonuclease activity B domain D3H41_14430 IPR003876 Arginine deiminase D3H41_14435 IPR024904 Ornithine carbamoyltransferase D3H41_14435 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain D3H41_14435 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily D3H41_14435 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding D3H41_14435 IPR002292 Ornithine/putrescine carbamoyltransferase D3H41_14435 IPR006130 Aspartate/ornithine carbamoyltransferase D3H41_14445 IPR002082 Aspartate carbamoyltransferase D3H41_14445 IPR006130 Aspartate/ornithine carbamoyltransferase D3H41_14445 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding D3H41_14445 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain D3H41_14445 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily D3H41_14450 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily D3H41_14450 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal D3H41_14450 IPR002801 Aspartate transcarbamylase regulatory subunit D3H41_14450 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily D3H41_14450 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal D3H41_14455 IPR035959 RutC-like superfamily D3H41_14455 IPR019897 RidA, conserved site D3H41_14455 IPR006056 RidA family D3H41_14455 IPR006175 YjgF/YER057c/UK114 family D3H41_14460 IPR002123 Phospholipid/glycerol acyltransferase D3H41_14460 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase D3H41_14465 IPR036968 Enolpyruvate transferase domain superfamily D3H41_14465 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase D3H41_14465 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta D3H41_14465 IPR001986 Enolpyruvate transferase domain D3H41_14470 IPR036065 BolA-like superfamily D3H41_14470 IPR002634 BolA protein D3H41_14480 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC D3H41_14480 IPR042245 Tgt2/MlaC superfamily D3H41_14485 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD D3H41_14485 IPR003399 Mce/MlaD D3H41_14490 IPR003453 ABC transport permease subunit MlaE, Proteobacteria D3H41_14490 IPR030802 ABC transporter permease MalE D3H41_14495 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl D3H41_14495 IPR017871 ABC transporter, conserved site D3H41_14495 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_14495 IPR003439 ABC transporter-like D3H41_14495 IPR003593 AAA+ ATPase domain D3H41_14500 IPR004837 Sodium/calcium exchanger membrane region D3H41_14500 IPR004481 Sodium/potassium/calcium exchanger D3H41_14505 IPR035474 KpsF-like, SIS domain D3H41_14505 IPR001347 Sugar isomerase (SIS) D3H41_14505 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type D3H41_14505 IPR000644 CBS domain D3H41_14515 IPR005653 Organic solvent tolerance-like, N-terminal D3H41_14515 IPR014340 Lipopolysaccharide export system protein LptA D3H41_14520 IPR003593 AAA+ ATPase domain D3H41_14520 IPR003439 ABC transporter-like D3H41_14520 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_14520 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal D3H41_14520 IPR030921 LPS export ABC transporter, ATP-binding protein LptB D3H41_14520 IPR017871 ABC transporter, conserved site D3H41_14525 IPR000394 RNA polymerase sigma factor 54 D3H41_14525 IPR007046 RNA polymerase sigma factor 54, core-binding domain D3H41_14525 IPR007634 RNA polymerase sigma factor 54, DNA-binding D3H41_14525 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily D3H41_14530 IPR036567 Ribosome hibernation promotion factor-like D3H41_14530 IPR003489 Ribosome hibernation promoting factor/RaiA D3H41_14535 IPR016152 Phosphotransferase/anion transporter D3H41_14535 IPR002178 PTS EIIA type-2 domain D3H41_14535 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN D3H41_14540 IPR005337 RapZ-like family D3H41_14540 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_14545 IPR002114 Phosphotransferase system, HPr serine phosphorylation site D3H41_14545 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site D3H41_14545 IPR000032 Phosphocarrier protein HPr-like D3H41_14545 IPR035895 HPr-like superfamily D3H41_14550 IPR006668 Magnesium transporter, MgtE intracellular domain D3H41_14550 IPR006669 Magnesium transporter MgtE D3H41_14550 IPR038048 Magnesium transporter MgtE, transmembrane domain D3H41_14550 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily D3H41_14550 IPR038076 MgtE, N-terminal domain superfamily D3H41_14550 IPR000644 CBS domain D3H41_14550 IPR006667 SLC41 divalent cation transporters, integral membrane domain D3H41_14555 IPR036059 Metalloprotease TldD/PmbA superfamily D3H41_14555 IPR035068 Metalloprotease TldD/PmbA, N-terminal D3H41_14555 IPR002510 Metalloprotease TldD/PmbA D3H41_14560 IPR023153 PSPTO4464-like domain superfamily D3H41_14560 IPR006839 Ribosome-associated, YjgA D3H41_14565 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D3H41_14565 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site D3H41_14565 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain D3H41_14565 IPR036291 NAD(P)-binding domain superfamily D3H41_14570 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site D3H41_14570 IPR006225 Pseudouridine synthase, RluC/RluD D3H41_14570 IPR006145 Pseudouridine synthase, RsuA/RluA D3H41_14570 IPR020103 Pseudouridine synthase, catalytic domain superfamily D3H41_14580 IPR040765 RapA, N-terminal Tudor like domain 1 D3H41_14580 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_14580 IPR000330 SNF2-related, N-terminal domain D3H41_14580 IPR040766 RapA, N-terminal Tudor-like domain 2 D3H41_14580 IPR022737 RNA polymerase recycling, bacterial, C-terminal D3H41_14580 IPR038718 SNF2-like, N-terminal domain superfamily D3H41_14580 IPR014001 Helicase superfamily 1/2, ATP-binding domain D3H41_14580 IPR001650 Helicase, C-terminal D3H41_14580 IPR023949 RNA polymerase-associated protein RapA D3H41_14585 IPR029060 PIN-like domain superfamily D3H41_14585 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_14585 IPR003714 PhoH-like protein D3H41_14585 IPR002716 PIN domain D3H41_14590 IPR025502 TldD D3H41_14590 IPR002510 Metalloprotease TldD/PmbA D3H41_14590 IPR035068 Metalloprotease TldD/PmbA, N-terminal D3H41_14590 IPR036059 Metalloprotease TldD/PmbA superfamily D3H41_14595 IPR003010 Carbon-nitrogen hydrolase D3H41_14595 IPR001110 Uncharacterised protein family UPF0012, conserved site D3H41_14595 IPR036526 Carbon-nitrogen hydrolase superfamily D3H41_14600 IPR025263 Domain of unknown function DUF3971 D3H41_14600 IPR032712 AsmA-like, C-terminal D3H41_14600 IPR011836 Conserved hypothetical protein CHP02099 D3H41_14605 IPR003029 S1 domain D3H41_14605 IPR012340 Nucleic acid-binding, OB-fold D3H41_14605 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G D3H41_14605 IPR004659 Ribonuclease E/G D3H41_14605 IPR022967 RNA-binding domain, S1 D3H41_14610 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein D3H41_14610 IPR029001 Inosine triphosphate pyrophosphatase-like D3H41_14615 IPR026034 Cell shape-determining protein MreD, proteobacterial type D3H41_14615 IPR007227 Cell shape-determining protein MreD D3H41_14620 IPR007221 Rod shape-determining protein MreC D3H41_14620 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 D3H41_14620 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 D3H41_14625 IPR004753 Cell shape determining protein MreB D3H41_14660 IPR001082 Fimbrial protein pilin D3H41_14660 IPR012902 Prokaryotic N-terminal methylation site D3H41_14670 IPR042094 Type II secretion system F domain superfamily D3H41_14670 IPR003004 GspF/PilC family D3H41_14670 IPR011850 General secretion pathway protein F D3H41_14670 IPR001992 Type II secretion system conserved site D3H41_14670 IPR018076 Type II secretion system F domain D3H41_14675 IPR042181 Type II secretion system, protein E, N-terminal D3H41_14675 IPR003593 AAA+ ATPase domain D3H41_14675 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_14675 IPR013369 Type II secretion system GspE D3H41_14675 IPR001482 Type II/IV secretion system protein D3H41_14675 IPR037257 General secretory system II, protein E, N-terminal superfamily D3H41_14685 IPR003593 AAA+ ATPase domain D3H41_14685 IPR002477 Peptidoglycan binding-like D3H41_14685 IPR036365 PGBD-like superfamily D3H41_14685 IPR036366 PGBD superfamily D3H41_14685 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_14690 IPR001775 GspD/PilQ family D3H41_14690 IPR004845 Type II secretion system GspD, conserved site D3H41_14690 IPR013356 Type II secretion system GspD D3H41_14690 IPR004846 Type II/III secretion system D3H41_14690 IPR005644 NolW-like D3H41_14690 IPR038591 NolW-like superfamily D3H41_14710 IPR001633 EAL domain D3H41_14710 IPR000160 GGDEF domain D3H41_14710 IPR029787 Nucleotide cyclase D3H41_14710 IPR035919 EAL domain superfamily D3H41_14710 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 D3H41_14715 IPR012340 Nucleic acid-binding, OB-fold D3H41_14715 IPR000424 Primosome PriB/single-strand DNA-binding D3H41_14715 IPR011344 Single-stranded DNA-binding protein D3H41_14720 IPR016032 Signal transduction response regulator, C-terminal effector D3H41_14720 IPR000792 Transcription regulator LuxR, C-terminal D3H41_14720 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_14725 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type D3H41_14725 IPR005835 Nucleotidyl transferase domain D3H41_14725 IPR029044 Nucleotide-diphospho-sugar transferases D3H41_14730 IPR041102 UvrA, interaction domain D3H41_14730 IPR003439 ABC transporter-like D3H41_14730 IPR041552 UvrA DNA-binding domain D3H41_14730 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_14730 IPR017871 ABC transporter, conserved site D3H41_14730 IPR004602 UvrABC system subunit A D3H41_14740 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 D3H41_14740 IPR015421 Pyridoxal phosphate-dependent transferase, major domain D3H41_14740 IPR015424 Pyridoxal phosphate-dependent transferase D3H41_14740 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site D3H41_14740 IPR000192 Aminotransferase class V domain D3H41_14740 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase D3H41_14750 IPR002912 ACT domain D3H41_14750 IPR018042 Aspartate kinase, conserved site D3H41_14750 IPR001341 Aspartate kinase D3H41_14750 IPR005260 Aspartate kinase, monofunctional class D3H41_14750 IPR001048 Aspartate/glutamate/uridylate kinase D3H41_14750 IPR041745 Lysine-sensitive aspartokinase 3, N-terminal catalytic domain D3H41_14750 IPR036393 Acetylglutamate kinase-like superfamily D3H41_14755 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily D3H41_14755 IPR011005 Dihydropteroate synthase-like D3H41_14755 IPR036724 Cobalamin-binding domain superfamily D3H41_14755 IPR003726 Homocysteine-binding domain D3H41_14755 IPR000489 Pterin-binding domain D3H41_14755 IPR036594 Methionine synthase domain D3H41_14755 IPR036589 Homocysteine-binding domain superfamily D3H41_14755 IPR011822 Cobalamin-dependent methionine synthase D3H41_14755 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain D3H41_14755 IPR006158 Cobalamin (vitamin B12)-binding domain D3H41_14755 IPR004223 Vitamin B12-dependent methionine synthase, activation domain D3H41_14755 IPR033706 Methionine synthase, B12-binding domain D3H41_14760 IPR006153 Cation/H+ exchanger D3H41_14760 IPR018422 Cation/H+ exchanger, CPA1 family D3H41_14760 IPR038770 Sodium/solute symporter superfamily D3H41_14820 IPR011800 Phosphoadenosine phosphosulphate reductase CysH D3H41_14820 IPR002500 Phosphoadenosine phosphosulphate reductase D3H41_14820 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3H41_14820 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase D3H41_14825 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain D3H41_14825 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily D3H41_14825 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain D3H41_14825 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site D3H41_14825 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit D3H41_14830 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain D3H41_14830 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily D3H41_14830 IPR017938 Riboflavin synthase-like beta-barrel D3H41_14830 IPR001433 Oxidoreductase FAD/NAD(P)-binding D3H41_14830 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain D3H41_14830 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria D3H41_14830 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding D3H41_14830 IPR001094 Flavodoxin-like D3H41_14830 IPR008254 Flavodoxin/nitric oxide synthase D3H41_14830 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase D3H41_14830 IPR017927 FAD-binding domain, ferredoxin reductase-type D3H41_14830 IPR029039 Flavoprotein-like superfamily D3H41_14850 IPR018517 tRNA-dihydrouridine synthase, conserved site D3H41_14850 IPR001269 tRNA-dihydrouridine synthase D3H41_14850 IPR004653 tRNA-dihydrouridine(20/20a) synthase D3H41_14850 IPR035587 DUS-like, FMN-binding domain D3H41_14850 IPR013785 Aldolase-type TIM barrel D3H41_14855 IPR036390 Winged helix DNA-binding domain superfamily D3H41_14855 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_14855 IPR002481 Ferric-uptake regulator D3H41_14865 IPR001672 Phosphoglucose isomerase (PGI) D3H41_14865 IPR023096 Phosphoglucose isomerase, C-terminal D3H41_14865 IPR035476 Phosphoglucose isomerase, SIS domain 1 D3H41_14865 IPR018189 Phosphoglucose isomerase, conserved site D3H41_14865 IPR035482 Phosphoglucose isomerase, SIS domain 2 D3H41_14870 IPR001602 Uncharacterised protein family UPF0047 D3H41_14870 IPR035917 YjbQ-like superfamily D3H41_14875 IPR000821 Alanine racemase D3H41_14875 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal D3H41_14875 IPR011079 Alanine racemase, C-terminal D3H41_14875 IPR029066 PLP-binding barrel D3H41_14875 IPR001608 Alanine racemase, N-terminal D3H41_14875 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site D3H41_14880 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal D3H41_14880 IPR007693 DNA helicase, DnaB-like, N-terminal D3H41_14880 IPR007692 DNA helicase, DnaB type D3H41_14880 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily D3H41_14880 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_14880 IPR003593 AAA+ ATPase domain D3H41_14880 IPR007694 DNA helicase, DnaB-like, C-terminal D3H41_14890 IPR000244 Ribosomal protein L9 D3H41_14890 IPR009027 Ribosomal protein L9/RNase H1, N-terminal D3H41_14890 IPR036935 Ribosomal protein L9, N-terminal domain superfamily D3H41_14890 IPR020070 Ribosomal protein L9, N-terminal D3H41_14890 IPR020594 Ribosomal protein L9, bacteria/chloroplast D3H41_14890 IPR020069 Ribosomal protein L9, C-terminal D3H41_14890 IPR036791 Ribosomal protein L9, C-terminal domain superfamily D3H41_14895 IPR036870 Ribosomal protein S18 superfamily D3H41_14895 IPR001648 Ribosomal protein S18 D3H41_14895 IPR018275 Ribosomal protein S18, conserved site D3H41_14900 IPR012340 Nucleic acid-binding, OB-fold D3H41_14900 IPR023646 Primosomal replication protein PriB D3H41_14900 IPR000424 Primosome PriB/single-strand DNA-binding D3H41_14905 IPR000529 Ribosomal protein S6 D3H41_14905 IPR035980 Ribosomal protein S6 superfamily D3H41_14905 IPR020814 Ribosomal protein S6, plastid/chloroplast D3H41_14905 IPR020815 Ribosomal protein S6, conserved site D3H41_14905 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 D3H41_14910 IPR026019 Ribulose-phosphate 3-epimerase D3H41_14910 IPR013785 Aldolase-type TIM barrel D3H41_14910 IPR011060 Ribulose-phosphate binding barrel D3H41_14910 IPR000056 Ribulose-phosphate 3-epimerase-like D3H41_14915 IPR012263 Adenine modification methylase, M.EcoRV-type D3H41_14915 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3H41_14915 IPR012327 D12 class N6 adenine-specific DNA methyltransferase D3H41_14915 IPR002052 DNA methylase, N-6 adenine-specific, conserved site D3H41_14915 IPR023095 Adenine-specific methyltransferase, domain 2 D3H41_14925 IPR016037 3-dehydroquinate synthase AroB D3H41_14925 IPR030963 3-dehydroquinate synthase family D3H41_14925 IPR030960 3-dehydroquinate synthase domain D3H41_14930 IPR031322 Shikimate kinase/gluconokinase D3H41_14930 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_14930 IPR000623 Shikimate kinase/Threonine synthase-like 1 D3H41_14930 IPR023000 Shikimate kinase, conserved site D3H41_14935 IPR038591 NolW-like superfamily D3H41_14935 IPR005644 NolW-like D3H41_14935 IPR001775 GspD/PilQ family D3H41_14935 IPR021731 AMIN domain D3H41_14935 IPR004846 Type II/III secretion system D3H41_14935 IPR011662 Secretin/TonB, short N-terminal domain D3H41_14935 IPR004845 Type II secretion system GspD, conserved site D3H41_14935 IPR013355 Type IV pilus secretin PilQ D3H41_14960 IPR036950 Penicillin binding protein transglycosylase domain D3H41_14960 IPR023346 Lysozyme-like domain superfamily D3H41_14960 IPR001264 Glycosyl transferase, family 51 D3H41_14960 IPR012338 Beta-lactamase/transpeptidase-like D3H41_14960 IPR031376 Penicillin-binding protein, OB-like domain D3H41_14960 IPR001460 Penicillin-binding protein, transpeptidase D3H41_14965 IPR005119 LysR, substrate-binding D3H41_14965 IPR000847 Transcription regulator HTH, LysR D3H41_14965 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_14965 IPR036390 Winged helix DNA-binding domain superfamily D3H41_14970 IPR013740 Redoxin D3H41_14970 IPR036249 Thioredoxin-like superfamily D3H41_14970 IPR014025 Glutaredoxin subgroup D3H41_14970 IPR037944 Peroxiredoxin-5-like D3H41_14970 IPR011767 Glutaredoxin active site D3H41_14970 IPR002109 Glutaredoxin D3H41_14970 IPR011906 Glutaredoxin domain D3H41_14975 IPR036188 FAD/NAD(P)-binding domain superfamily D3H41_14975 IPR023753 FAD/NAD(P)-binding domain D3H41_14975 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I D3H41_14975 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D3H41_14975 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site D3H41_14975 IPR006258 Dihydrolipoamide dehydrogenase D3H41_14975 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily D3H41_14985 IPR009049 Argininosuccinate lyase D3H41_14985 IPR029419 Argininosuccinate lyase, C-terminal D3H41_14985 IPR016181 Acyl-CoA N-acyltransferase D3H41_14985 IPR024083 Fumarase/histidase, N-terminal D3H41_14985 IPR020557 Fumarate lyase, conserved site D3H41_14985 IPR000362 Fumarate lyase family D3H41_14985 IPR022761 Fumarate lyase, N-terminal D3H41_14985 IPR000182 GNAT domain D3H41_14985 IPR008948 L-Aspartase-like D3H41_14985 IPR011244 Bifunctional argininosuccinate lyase/acetyltransferase D3H41_14990 IPR001518 Argininosuccinate synthase D3H41_14990 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3H41_14990 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body D3H41_14990 IPR023434 Argininosuccinate synthase, type 1 subfamily D3H41_14990 IPR018223 Argininosuccinate synthase, conserved site D3H41_14995 IPR004662 Acetylglutamate kinase family D3H41_14995 IPR037528 Acetylglutamate kinase ArgB D3H41_14995 IPR001048 Aspartate/glutamate/uridylate kinase D3H41_14995 IPR041731 N-Acetyl-L-glutamate kinase, noncyclic D3H41_14995 IPR036393 Acetylglutamate kinase-like superfamily D3H41_15000 IPR012280 Semialdehyde dehydrogenase, dimerisation domain D3H41_15000 IPR000534 Semialdehyde dehydrogenase, NAD-binding D3H41_15000 IPR036291 NAD(P)-binding domain superfamily D3H41_15000 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site D3H41_15000 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 D3H41_15005 IPR010169 Acetylornithine deacetylase ArgE D3H41_15005 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site D3H41_15005 IPR036264 Bacterial exopeptidase dimerisation domain D3H41_15005 IPR002933 Peptidase M20 D3H41_15005 IPR011650 Peptidase M20, dimerisation domain D3H41_15010 IPR033129 Phosphoenolpyruvate carboxylase, His active site D3H41_15010 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily D3H41_15010 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site D3H41_15010 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type D3H41_15010 IPR021135 Phosphoenolpyruvate carboxylase D3H41_15020 IPR029041 FAD-linked oxidoreductase-like D3H41_15020 IPR003171 Methylenetetrahydrofolate reductase D3H41_15020 IPR004620 5,10-methylenetetrahydrofolate reductase D3H41_15025 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain D3H41_15025 IPR036393 Acetylglutamate kinase-like superfamily D3H41_15025 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding D3H41_15025 IPR001341 Aspartate kinase D3H41_15025 IPR018042 Aspartate kinase, conserved site D3H41_15025 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I D3H41_15025 IPR001342 Homoserine dehydrogenase, catalytic D3H41_15025 IPR019811 Homoserine dehydrogenase, conserved site D3H41_15025 IPR036291 NAD(P)-binding domain superfamily D3H41_15025 IPR001048 Aspartate/glutamate/uridylate kinase D3H41_15030 IPR011821 O-succinylhomoserine (thiol)-lyase D3H41_15030 IPR015421 Pyridoxal phosphate-dependent transferase, major domain D3H41_15030 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 D3H41_15030 IPR015424 Pyridoxal phosphate-dependent transferase D3H41_15030 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme D3H41_15040 IPR012302 Malic enzyme, NAD-binding D3H41_15040 IPR001891 Malic oxidoreductase D3H41_15040 IPR037062 Malic enzyme, N-terminal domain superfamily D3H41_15040 IPR012301 Malic enzyme, N-terminal domain D3H41_15040 IPR015884 Malic enzyme, conserved site D3H41_15040 IPR036291 NAD(P)-binding domain superfamily D3H41_15045 IPR009078 Ferritin-like superfamily D3H41_15045 IPR009040 Ferritin-like diiron domain D3H41_15045 IPR008331 Ferritin/DPS protein domain D3H41_15045 IPR002024 Bacterioferritin D3H41_15045 IPR012347 Ferritin-like D3H41_15050 IPR007419 BFD-like [2Fe-2S]-binding domain D3H41_15050 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily D3H41_15055 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle D3H41_15055 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal D3H41_15055 IPR009000 Translation protein, beta-barrel domain superfamily D3H41_15055 IPR000795 Transcription factor, GTP-binding domain D3H41_15055 IPR005225 Small GTP-binding protein domain D3H41_15055 IPR031157 Tr-type G domain, conserved site D3H41_15055 IPR033720 Elongation factor Tu, domain 2 D3H41_15055 IPR004161 Translation elongation factor EFTu-like, domain 2 D3H41_15055 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain D3H41_15055 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal D3H41_15055 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_15060 IPR041095 Elongation Factor G, domain II D3H41_15060 IPR000640 Elongation factor EFG, domain V-like D3H41_15060 IPR035649 EFG, domain V D3H41_15060 IPR035647 EF-G domain III/V-like D3H41_15060 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_15060 IPR005517 Translation elongation factor EFG/EF2, domain IV D3H41_15060 IPR004540 Translation elongation factor EFG/EF2 D3H41_15060 IPR009000 Translation protein, beta-barrel domain superfamily D3H41_15060 IPR009022 Elongation factor G, domain III D3H41_15060 IPR004161 Translation elongation factor EFTu-like, domain 2 D3H41_15060 IPR031157 Tr-type G domain, conserved site D3H41_15060 IPR000795 Transcription factor, GTP-binding domain D3H41_15060 IPR005225 Small GTP-binding protein domain D3H41_15060 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D3H41_15060 IPR020568 Ribosomal protein S5 domain 2-type fold D3H41_15065 IPR020606 Ribosomal protein S7, conserved site D3H41_15065 IPR000235 Ribosomal protein S5/S7 D3H41_15065 IPR023798 Ribosomal protein S7 domain D3H41_15065 IPR036823 Ribosomal protein S7 domain superfamily D3H41_15065 IPR005717 Ribosomal protein S7, bacterial/organellar-type D3H41_15070 IPR012340 Nucleic acid-binding, OB-fold D3H41_15070 IPR005679 Ribosomal protein S12, bacterial-type D3H41_15070 IPR006032 Ribosomal protein S12/S23 D3H41_15075 IPR007215 Sulphur relay, TusB/DsrH D3H41_15075 IPR027396 DsrEFH-like D3H41_15075 IPR023526 Sulphur relay, TusB D3H41_15080 IPR017462 Sulphur relay, TusC/DsrF D3H41_15080 IPR003787 Sulphur relay, DsrE/F-like protein D3H41_15080 IPR027396 DsrEFH-like D3H41_15085 IPR003787 Sulphur relay, DsrE/F-like protein D3H41_15085 IPR017463 Sulphur relay, TusD/DsrE D3H41_15085 IPR027396 DsrEFH-like D3H41_15090 IPR013559 YheO-like D3H41_15090 IPR039446 Transcriptional regulator DauR-like D3H41_15090 IPR039445 Transcriptional regulator DauR-like, HTH domain D3H41_15095 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain D3H41_15095 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal D3H41_15095 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily D3H41_15105 IPR007236 SlyX D3H41_15110 IPR000246 Peptidase T2, asparaginase 2 D3H41_15110 IPR029055 Nucleophile aminohydrolases, N-terminal D3H41_15120 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain D3H41_15130 IPR038770 Sodium/solute symporter superfamily D3H41_15130 IPR036291 NAD(P)-binding domain superfamily D3H41_15130 IPR004771 K+/H+ exchanger D3H41_15130 IPR020884 Glutathione-regulated potassium-efflux system protein KefB D3H41_15130 IPR006153 Cation/H+ exchanger D3H41_15130 IPR003148 Regulator of K+ conductance, N-terminal D3H41_15135 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG D3H41_15135 IPR029039 Flavoprotein-like superfamily D3H41_15135 IPR003680 Flavodoxin-like fold D3H41_15140 IPR003593 AAA+ ATPase domain D3H41_15140 IPR032781 ABC-transporter extension domain D3H41_15140 IPR003439 ABC transporter-like D3H41_15140 IPR017871 ABC transporter, conserved site D3H41_15140 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_15150 IPR012020 AB hydrolase 4 family D3H41_15150 IPR029058 Alpha/Beta hydrolase fold D3H41_15150 IPR000952 AB hydrolase 4, conserved site D3H41_15150 IPR000073 Alpha/beta hydrolase fold-1 D3H41_15155 IPR036685 YehU-like superfamily D3H41_15155 IPR010648 Uncharacterised protein family UPF0270 D3H41_15160 IPR006083 Phosphoribulokinase/uridine kinase D3H41_15160 IPR006082 Phosphoribulokinase D3H41_15160 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_15165 IPR018490 Cyclic nucleotide-binding-like D3H41_15165 IPR036390 Winged helix DNA-binding domain superfamily D3H41_15165 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_15165 IPR018335 Transcription regulator HTH, Crp-type, conserved site D3H41_15165 IPR018488 Cyclic nucleotide-binding, conserved site D3H41_15165 IPR000595 Cyclic nucleotide-binding domain D3H41_15165 IPR012318 Crp-type HTH domain D3H41_15165 IPR014710 RmlC-like jelly roll fold D3H41_15175 IPR017649 Succinylglutamate-semialdehyde dehydrogenase D3H41_15175 IPR016162 Aldehyde dehydrogenase, N-terminal D3H41_15175 IPR016161 Aldehyde/histidinol dehydrogenase D3H41_15175 IPR016163 Aldehyde dehydrogenase, C-terminal D3H41_15175 IPR029510 Aldehyde dehydrogenase, glutamic acid active site D3H41_15175 IPR015590 Aldehyde dehydrogenase domain D3H41_15175 IPR016160 Aldehyde dehydrogenase, cysteine active site D3H41_15180 IPR007041 Arginine N-succinyltransferase AstA/AruG D3H41_15180 IPR017650 Arginine N-succinyltransferase D3H41_15180 IPR016181 Acyl-CoA N-acyltransferase D3H41_15185 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria D3H41_15185 IPR015421 Pyridoxal phosphate-dependent transferase, major domain D3H41_15185 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 D3H41_15185 IPR015424 Pyridoxal phosphate-dependent transferase D3H41_15185 IPR005814 Aminotransferase class-III D3H41_15185 IPR004636 Acetylornithine/Succinylornithine transaminase family D3H41_15190 IPR029062 Class I glutamine amidotransferase-like D3H41_15190 IPR017926 Glutamine amidotransferase D3H41_15190 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain D3H41_15205 IPR002305 Aminoacyl-tRNA synthetase, class Ic D3H41_15205 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3H41_15205 IPR002306 Tryptophan-tRNA ligase D3H41_15205 IPR024109 Tryptophan-tRNA ligase, bacterial-type D3H41_15210 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic D3H41_15210 IPR037512 Phosphoglycolate phosphatase, prokaryotic D3H41_15210 IPR006439 HAD hydrolase, subfamily IA D3H41_15210 IPR036412 HAD-like superfamily D3H41_15210 IPR041492 Haloacid dehalogenase-like hydrolase D3H41_15210 IPR023214 HAD superfamily D3H41_15210 IPR023198 Phosphoglycolate phosphatase-like, domain 2 D3H41_15210 IPR006549 HAD-superfamily hydrolase,subfamily IIIA D3H41_15215 IPR029064 50S ribosomal protein L30e-like D3H41_15215 IPR001537 tRNA/rRNA methyltransferase, SpoU type D3H41_15215 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB D3H41_15215 IPR029028 Alpha/beta knot methyltransferases D3H41_15215 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal D3H41_15215 IPR013123 RNA 2-O ribose methyltransferase, substrate binding D3H41_15215 IPR004441 RNA methyltransferase TrmH family D3H41_15220 IPR011129 Cold shock domain D3H41_15220 IPR040476 RNase II/RNase R, cold shock domain D3H41_15220 IPR013668 Ribonuclease R winged-helix domain D3H41_15220 IPR013223 Ribonuclease B, N-terminal OB domain D3H41_15220 IPR001900 Ribonuclease II/R D3H41_15220 IPR022967 RNA-binding domain, S1 D3H41_15220 IPR004476 Ribonuclease II/ribonuclease R D3H41_15220 IPR011805 Ribonuclease R D3H41_15220 IPR003029 S1 domain D3H41_15220 IPR012340 Nucleic acid-binding, OB-fold D3H41_15220 IPR022966 Ribonuclease II/R, conserved site D3H41_15225 IPR030489 Transcription regulator Rrf2-type, conserved site D3H41_15225 IPR000944 Transcription regulator Rrf2-type D3H41_15225 IPR023761 Transcriptional repressor HTH, NsrR D3H41_15225 IPR036390 Winged helix DNA-binding domain superfamily D3H41_15225 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_15230 IPR017938 Riboflavin synthase-like beta-barrel D3H41_15230 IPR001433 Oxidoreductase FAD/NAD(P)-binding D3H41_15230 IPR023950 Flavohemoprotein D3H41_15230 IPR012292 Globin/Protoglobin D3H41_15230 IPR009050 Globin-like superfamily D3H41_15230 IPR000971 Globin D3H41_15230 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain D3H41_15230 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase D3H41_15230 IPR017927 FAD-binding domain, ferredoxin reductase-type D3H41_15230 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain D3H41_15235 IPR011990 Tetratricopeptide-like helical domain superfamily D3H41_15235 IPR006597 Sel1-like repeat D3H41_15245 IPR033128 Adenylosuccinate synthase, active site D3H41_15245 IPR018220 Adenylosuccinate synthase, GTP-binding site D3H41_15245 IPR042109 Adenylosuccinate synthetase, domain 1 D3H41_15245 IPR042110 Adenylosuccinate synthetase, domain 2 D3H41_15245 IPR042111 Adenylosuccinate synthetase, domain 3 D3H41_15245 IPR001114 Adenylosuccinate synthetase D3H41_15245 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_15250 IPR019201 Protein of unknown function DUF2065 D3H41_15255 IPR036013 Band 7/SPFH domain superfamily D3H41_15255 IPR001107 Band 7 domain D3H41_15255 IPR010200 HflC D3H41_15260 IPR001107 Band 7 domain D3H41_15260 IPR020980 Menbrane protein HflK, N-terminal D3H41_15260 IPR010201 HflK D3H41_15260 IPR001972 Stomatin family D3H41_15260 IPR036013 Band 7/SPFH domain superfamily D3H41_15265 IPR042108 GTPase HflX, N-terminal domain superfamily D3H41_15265 IPR025121 GTPase HflX, N-terminal D3H41_15265 IPR016496 GTPase HflX D3H41_15265 IPR006073 GTP binding domain D3H41_15265 IPR032305 GTP-binding protein, middle domain D3H41_15265 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_15265 IPR030394 HflX-type guanine nucleotide-binding (G) domain D3H41_15265 IPR035647 EF-G domain III/V-like D3H41_15270 IPR010920 LSM domain superfamily D3H41_15270 IPR005001 RNA-binding protein Hfq D3H41_15275 IPR018022 IPP transferase D3H41_15275 IPR039657 Dimethylallyltransferase D3H41_15275 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_15280 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3H41_15280 IPR002099 DNA mismatch repair protein family, N-terminal D3H41_15280 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms D3H41_15280 IPR014790 MutL, C-terminal, dimerisation D3H41_15280 IPR042120 MutL, C-terminal domain, dimerisation subdomain D3H41_15280 IPR042121 MutL, C-terminal domain, regulatory subdomain D3H41_15280 IPR037198 MutL, C-terminal domain superfamily D3H41_15280 IPR020667 DNA mismatch repair protein, MutL D3H41_15280 IPR014762 DNA mismatch repair, conserved site D3H41_15280 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D3H41_15280 IPR020568 Ribosomal protein S5 domain 2-type fold D3H41_15280 IPR013507 DNA mismatch repair protein, S5 domain 2-like D3H41_15285 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain D3H41_15290 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE D3H41_15290 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_15300 IPR004453 Epoxyqueuosine reductase QueG D3H41_15300 IPR013542 Domain of unknown function DUF1730 D3H41_15300 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site D3H41_15300 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain D3H41_15365 IPR012337 Ribonuclease H-like superfamily D3H41_15365 IPR036397 Ribonuclease H superfamily D3H41_15365 IPR022894 Oligoribonuclease D3H41_15365 IPR013520 Exonuclease, RNase T/DNA polymerase III D3H41_15370 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain D3H41_15370 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_15370 IPR010914 RsgA GTPase domain D3H41_15370 IPR004881 Ribosome biogenesis GTPase RsgA D3H41_15375 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 D3H41_15375 IPR003817 Phosphatidylserine decarboxylase-related D3H41_15375 IPR033177 Phosphatidylserine decarboxylase D3H41_15380 IPR006037 Regulator of K+ conductance, C-terminal D3H41_15380 IPR031312 Sodium/sulphate symporter, conserved site D3H41_15380 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily D3H41_15380 IPR004680 Citrate transporter-like domain D3H41_15390 IPR017850 Alkaline-phosphatase-like, core domain superfamily D3H41_15390 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent D3H41_15390 IPR006124 Metalloenzyme D3H41_15390 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily D3H41_15390 IPR011258 BPG-independent PGAM, N-terminal D3H41_15395 IPR036873 Rhodanese-like domain superfamily D3H41_15395 IPR001763 Rhodanese-like domain D3H41_15400 IPR035958 SecB-like superfamily D3H41_15400 IPR003708 Bacterial protein export chaperone SecB D3H41_15405 IPR036291 NAD(P)-binding domain superfamily D3H41_15405 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal D3H41_15405 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent D3H41_15405 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal D3H41_15405 IPR013328 6-phosphogluconate dehydrogenase, domain 2 D3H41_15405 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily D3H41_15410 IPR011004 Trimeric LpxA-like superfamily D3H41_15410 IPR005881 Serine O-acetyltransferase D3H41_15410 IPR042122 Serine acetyltransferase, N-terminal domain superfamily D3H41_15410 IPR010493 Serine acetyltransferase, N-terminal D3H41_15410 IPR018357 Hexapeptide transferase, conserved site D3H41_15410 IPR001451 Hexapeptide repeat D3H41_15415 IPR011055 Duplicated hybrid motif D3H41_15415 IPR016047 Peptidase M23 D3H41_15425 IPR023772 DNA-binding HTH domain, TetR-type, conserved site D3H41_15425 IPR009057 Homeobox-like domain superfamily D3H41_15425 IPR001647 DNA-binding HTH domain, TetR-type D3H41_15425 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily D3H41_15425 IPR013571 Transcription regulator QacR, C-terminal D3H41_15435 IPR004525 Elongation factor P--(R)-beta-lysine ligase D3H41_15435 IPR006195 Aminoacyl-tRNA synthetase, class II D3H41_15435 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) D3H41_15440 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit D3H41_15440 IPR036188 FAD/NAD(P)-binding domain superfamily D3H41_15440 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily D3H41_15440 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal D3H41_15440 IPR005884 Fumarate reductase, flavoprotein subunit D3H41_15440 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily D3H41_15440 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain D3H41_15440 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site D3H41_15445 IPR036010 2Fe-2S ferredoxin-like superfamily D3H41_15445 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain D3H41_15445 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein D3H41_15445 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site D3H41_15445 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal D3H41_15445 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain D3H41_15445 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site D3H41_15445 IPR012675 Beta-grasp domain superfamily D3H41_15445 IPR009051 Alpha-helical ferredoxin D3H41_15450 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit D3H41_15450 IPR003510 Fumarate reductase, subunit C D3H41_15455 IPR003418 Fumarate reductase, subunit D D3H41_15455 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit D3H41_15465 IPR013185 Translation elongation factor, KOW-like D3H41_15465 IPR001059 Translation elongation factor P/YeiP, central D3H41_15465 IPR013852 Translation elongation factor P/YeiP, conserved site D3H41_15465 IPR014722 Ribosomal protein L2, domain 2 D3H41_15465 IPR012340 Nucleic acid-binding, OB-fold D3H41_15465 IPR011768 Translation elongation factor P D3H41_15465 IPR008991 Translation protein SH3-like domain superfamily D3H41_15465 IPR015365 Elongation factor P, C-terminal D3H41_15465 IPR020599 Translation elongation factor P/YeiP D3H41_15470 IPR007197 Radical SAM D3H41_15470 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase D3H41_15470 IPR013785 Aldolase-type TIM barrel D3H41_15470 IPR022462 Lysine-2,3-aminomutase-like D3H41_15475 IPR003416 MgtC/SapB/SrpB/YhiD family D3H41_15485 IPR027409 GroEL-like apical domain superfamily D3H41_15485 IPR027410 TCP-1-like chaperonin intermediate domain superfamily D3H41_15485 IPR027413 GroEL-like equatorial domain superfamily D3H41_15485 IPR002423 Chaperonin Cpn60/TCP-1 family D3H41_15485 IPR001844 Chaperonin Cpn60 D3H41_15485 IPR018370 Chaperonin Cpn60, conserved site D3H41_15490 IPR037124 GroES chaperonin superfamily D3H41_15490 IPR018369 Chaperonin GroES, conserved site D3H41_15490 IPR011032 GroES-like superfamily D3H41_15490 IPR020818 GroES chaperonin family D3H41_15495 IPR002528 Multi antimicrobial extrusion protein D3H41_15500 IPR035966 Phosphofructokinase superfamily D3H41_15500 IPR000023 Phosphofructokinase domain D3H41_15500 IPR015912 Phosphofructokinase, conserved site D3H41_15500 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic D3H41_15500 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type D3H41_15500 IPR022953 ATP-dependent 6-phosphofructokinase D3H41_15505 IPR023783 Cation efflux pump FieF D3H41_15505 IPR002524 Cation efflux protein D3H41_15505 IPR027470 Cation efflux protein, cytoplasmic domain D3H41_15505 IPR036837 Cation efflux protein, cytoplasmic domain superfamily D3H41_15505 IPR027469 Cation efflux transmembrane domain superfamily D3H41_15510 IPR012899 LTXXQ motif family protein D3H41_15515 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_15515 IPR001789 Signal transduction response regulator, receiver domain D3H41_15515 IPR001867 OmpR/PhoB-type DNA-binding domain D3H41_15515 IPR039420 Transcriptional regulatory protein WalR-like D3H41_15515 IPR011006 CheY-like superfamily D3H41_15520 IPR004358 Signal transduction histidine kinase-related protein, C-terminal D3H41_15520 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily D3H41_15520 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain D3H41_15520 IPR005467 Histidine kinase domain D3H41_15520 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3H41_15520 IPR003594 Histidine kinase/HSP90-like ATPase D3H41_15520 IPR038515 CpxA, periplasmic domain superfamily D3H41_15520 IPR003660 HAMP domain D3H41_15520 IPR032404 Two-component sensor protein CpxA, periplasmic domain D3H41_15525 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily D3H41_15525 IPR001189 Manganese/iron superoxide dismutase D3H41_15525 IPR019833 Manganese/iron superoxide dismutase, binding site D3H41_15525 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily D3H41_15525 IPR019831 Manganese/iron superoxide dismutase, N-terminal D3H41_15525 IPR019832 Manganese/iron superoxide dismutase, C-terminal D3H41_15530 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase D3H41_15530 IPR029028 Alpha/beta knot methyltransferases D3H41_15530 IPR001537 tRNA/rRNA methyltransferase, SpoU type D3H41_15530 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal D3H41_15535 IPR007313 FxsA cytoplasmic membrane protein D3H41_15540 IPR004708 Aspartate ammonia-lyase D3H41_15540 IPR000362 Fumarate lyase family D3H41_15540 IPR018951 Fumarase C, C-terminal D3H41_15540 IPR024083 Fumarase/histidase, N-terminal D3H41_15540 IPR020557 Fumarate lyase, conserved site D3H41_15540 IPR008948 L-Aspartase-like D3H41_15540 IPR022761 Fumarate lyase, N-terminal D3H41_15545 IPR004668 Anaerobic c4-dicarboxylate membrane transporter D3H41_15550 IPR035671 DsbD gamma D3H41_15550 IPR003834 Cytochrome C biogenesis protein, transmembrane domain D3H41_15550 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain D3H41_15550 IPR013766 Thioredoxin domain D3H41_15550 IPR017937 Thioredoxin, conserved site D3H41_15550 IPR036249 Thioredoxin-like superfamily D3H41_15550 IPR022910 Thiol:disulphide interchange protein DsbD D3H41_15550 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily D3H41_15555 IPR016032 Signal transduction response regulator, C-terminal effector D3H41_15555 IPR000792 Transcription regulator LuxR, C-terminal D3H41_15555 IPR011006 CheY-like superfamily D3H41_15555 IPR001789 Signal transduction response regulator, receiver domain D3H41_15560 IPR006153 Cation/H+ exchanger D3H41_15560 IPR030151 K(+)/H(+) antiporter NhaP D3H41_15560 IPR005170 Transporter-associated domain D3H41_15560 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily D3H41_15560 IPR023729 K(+)/H(+) antiporter NhaP2 D3H41_15560 IPR038770 Sodium/solute symporter superfamily D3H41_15560 IPR016169 FAD-binding, type PCMH, subdomain 2 D3H41_15560 IPR006037 Regulator of K+ conductance, C-terminal D3H41_15560 IPR036318 FAD-binding, type PCMH-like superfamily D3H41_15570 IPR019899 Sodium/solute symporter, VC2705 subfamily D3H41_15570 IPR001734 Sodium/solute symporter D3H41_15570 IPR038377 Sodium/glucose symporter superfamily D3H41_15585 IPR000362 Fumarate lyase family D3H41_15585 IPR020557 Fumarate lyase, conserved site D3H41_15585 IPR018951 Fumarase C, C-terminal D3H41_15585 IPR024083 Fumarase/histidase, N-terminal D3H41_15585 IPR008948 L-Aspartase-like D3H41_15585 IPR005677 Fumarate hydratase, class II D3H41_15585 IPR022761 Fumarate lyase, N-terminal D3H41_15590 IPR001789 Signal transduction response regulator, receiver domain D3H41_15590 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily D3H41_15590 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain D3H41_15590 IPR003594 Histidine kinase/HSP90-like ATPase D3H41_15590 IPR036641 HPT domain superfamily D3H41_15590 IPR037952 Sensor histidine kinase TorS, sensor domain D3H41_15590 IPR004358 Signal transduction histidine kinase-related protein, C-terminal D3H41_15590 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain D3H41_15590 IPR003660 HAMP domain D3H41_15590 IPR038188 TorS, sensor domain superfamily D3H41_15590 IPR005467 Histidine kinase domain D3H41_15590 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3H41_15590 IPR011006 CheY-like superfamily D3H41_15595 IPR036259 MFS transporter superfamily D3H41_15595 IPR024989 Major facilitator superfamily associated domain D3H41_15595 IPR026032 Probable 3-phenylpropionic acid transporter D3H41_15610 IPR011904 Acetate-CoA ligase D3H41_15610 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain D3H41_15610 IPR025110 AMP-binding enzyme, C-terminal domain D3H41_15610 IPR020845 AMP-binding, conserved site D3H41_15610 IPR000873 AMP-dependent synthetase/ligase D3H41_15610 IPR042099 AMP-dependent synthetase-like superfamily D3H41_15615 IPR036441 Dehydroquinase, class II superfamily D3H41_15615 IPR018509 Dehydroquinase, class II, conserved site D3H41_15615 IPR001874 Dehydroquinase, class II D3H41_15620 IPR001249 Acetyl-CoA biotin carboxyl carrier D3H41_15620 IPR001882 Biotin-binding site D3H41_15620 IPR000089 Biotin/lipoyl attachment D3H41_15620 IPR011053 Single hybrid motif D3H41_15625 IPR005481 Biotin carboxylase-like, N-terminal domain D3H41_15625 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase D3H41_15625 IPR011761 ATP-grasp fold D3H41_15625 IPR013815 ATP-grasp fold, subdomain 1 D3H41_15625 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain D3H41_15625 IPR005482 Biotin carboxylase, C-terminal D3H41_15625 IPR011054 Rudiment single hybrid motif D3H41_15625 IPR011764 Biotin carboxylation domain D3H41_15625 IPR016185 Pre-ATP-grasp domain superfamily D3H41_15635 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3H41_15635 IPR004498 Ribosomal protein L11 methyltransferase D3H41_15640 IPR013785 Aldolase-type TIM barrel D3H41_15640 IPR035587 DUS-like, FMN-binding domain D3H41_15640 IPR032887 tRNA-dihydrouridine synthase B D3H41_15640 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal D3H41_15640 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 D3H41_15640 IPR001269 tRNA-dihydrouridine synthase D3H41_15640 IPR018517 tRNA-dihydrouridine synthase, conserved site D3H41_15645 IPR002197 DNA binding HTH domain, Fis-type D3H41_15645 IPR009057 Homeobox-like domain superfamily D3H41_15645 IPR005412 DNA-binding protein Fis D3H41_15655 IPR003593 AAA+ ATPase domain D3H41_15655 IPR003439 ABC transporter-like D3H41_15655 IPR017871 ABC transporter, conserved site D3H41_15655 IPR032781 ABC-transporter extension domain D3H41_15655 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_15720 IPR015424 Pyridoxal phosphate-dependent transferase D3H41_15720 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily D3H41_15720 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal D3H41_15720 IPR015421 Pyridoxal phosphate-dependent transferase, major domain D3H41_15720 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal D3H41_15720 IPR000310 Orn/Lys/Arg decarboxylase, major domain D3H41_15720 IPR011193 Ornithine/lysine/arginine decarboxylase D3H41_15720 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 D3H41_15725 IPR002293 Amino acid/polyamine transporter I D3H41_15725 IPR004754 Amino acid antiporter D3H41_15735 IPR016032 Signal transduction response regulator, C-terminal effector D3H41_15735 IPR040970 CadC C-terminal domain 1 D3H41_15735 IPR001867 OmpR/PhoB-type DNA-binding domain D3H41_15735 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_15735 IPR011990 Tetratricopeptide-like helical domain superfamily D3H41_15735 IPR039420 Transcriptional regulatory protein WalR-like D3H41_15750 IPR001790 Ribosomal protein L10P D3H41_15750 IPR022973 Ribosomal protein L10 D3H41_15755 IPR000206 Ribosomal protein L7/L12 D3H41_15755 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like D3H41_15755 IPR008932 Ribosomal protein L7/L12, oligomerisation D3H41_15755 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily D3H41_15755 IPR013823 Ribosomal protein L7/L12, C-terminal D3H41_15775 IPR000086 NUDIX hydrolase domain D3H41_15775 IPR015797 NUDIX hydrolase-like domain superfamily D3H41_15775 IPR015376 Zinc ribbon, NADH pyrophosphatase D3H41_15775 IPR020084 NUDIX hydrolase, conserved site D3H41_15775 IPR022925 NADH pyrophosphatase NudC D3H41_15780 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ D3H41_15780 IPR038309 Rsd/AlgQ superfamily D3H41_15780 IPR023785 Regulator of RNA polymerase sigma(70) subunit, Rsd D3H41_15790 IPR012754 DNA-directed RNA polymerase, subunit beta-prime D3H41_15790 IPR006592 RNA polymerase, N-terminal D3H41_15790 IPR007080 RNA polymerase Rpb1, domain 1 D3H41_15790 IPR000722 RNA polymerase, alpha subunit D3H41_15790 IPR042102 RNA polymerase Rpb1, domain 3 superfamily D3H41_15790 IPR007066 RNA polymerase Rpb1, domain 3 D3H41_15790 IPR007081 RNA polymerase Rpb1, domain 5 D3H41_15790 IPR038120 RNA polymerase Rpb1, funnel domain superfamily D3H41_15790 IPR007083 RNA polymerase Rpb1, domain 4 D3H41_15795 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain D3H41_15795 IPR014724 RNA polymerase Rpb2, OB-fold D3H41_15795 IPR007641 RNA polymerase Rpb2, domain 7 D3H41_15795 IPR007645 RNA polymerase Rpb2, domain 3 D3H41_15795 IPR007644 RNA polymerase, beta subunit, protrusion D3H41_15795 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain D3H41_15795 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily D3H41_15795 IPR037034 RNA polymerase Rpb2, domain 2 superfamily D3H41_15795 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type D3H41_15795 IPR007121 RNA polymerase, beta subunit, conserved site D3H41_15795 IPR015712 DNA-directed RNA polymerase, subunit 2 D3H41_15795 IPR007642 RNA polymerase Rpb2, domain 2 D3H41_15800 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily D3H41_15800 IPR008932 Ribosomal protein L7/L12, oligomerisation D3H41_15800 IPR013823 Ribosomal protein L7/L12, C-terminal D3H41_15800 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like D3H41_15800 IPR000206 Ribosomal protein L7/L12 D3H41_15805 IPR022973 Ribosomal protein L10 D3H41_15805 IPR001790 Ribosomal protein L10P D3H41_15810 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich D3H41_15810 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein D3H41_15810 IPR023674 Ribosomal protein L1-like D3H41_15810 IPR002143 Ribosomal protein L1 D3H41_15810 IPR005878 Ribosomal protein L1, bacterial-type D3H41_15810 IPR023673 Ribosomal protein L1, conserved site D3H41_15815 IPR006519 Ribosomal protein L11, bacterial-type D3H41_15815 IPR020784 Ribosomal protein L11, N-terminal D3H41_15815 IPR020785 Ribosomal protein L11, conserved site D3H41_15815 IPR036769 Ribosomal protein L11, C-terminal domain superfamily D3H41_15815 IPR000911 Ribosomal protein L11/L12 D3H41_15815 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily D3H41_15815 IPR020783 Ribosomal protein L11, C-terminal D3H41_15820 IPR001062 Transcription antitermination protein, NusG D3H41_15820 IPR008991 Translation protein SH3-like domain superfamily D3H41_15820 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site D3H41_15820 IPR014722 Ribosomal protein L2, domain 2 D3H41_15820 IPR036735 NusG, N-terminal domain superfamily D3H41_15820 IPR006645 NusG, N-terminal D3H41_15820 IPR005824 KOW D3H41_15825 IPR005807 SecE subunit of protein translocation complex, bacterial-like D3H41_15825 IPR038379 SecE superfamily D3H41_15825 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit D3H41_15835 IPR004161 Translation elongation factor EFTu-like, domain 2 D3H41_15835 IPR031157 Tr-type G domain, conserved site D3H41_15835 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_15835 IPR005225 Small GTP-binding protein domain D3H41_15835 IPR000795 Transcription factor, GTP-binding domain D3H41_15835 IPR009000 Translation protein, beta-barrel domain superfamily D3H41_15835 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle D3H41_15835 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal D3H41_15835 IPR033720 Elongation factor Tu, domain 2 D3H41_15835 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain D3H41_15835 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal D3H41_15865 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_15865 IPR004566 Pantothenate kinase D3H41_15865 IPR006083 Phosphoribulokinase/uridine kinase D3H41_15870 IPR008988 Transcriptional repressor, C-terminal D3H41_15870 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_15870 IPR004408 Biotin--acetyl-CoA-carboxylase ligase D3H41_15870 IPR030855 Bifunctional ligase/repressor BirA D3H41_15870 IPR003142 Biotin protein ligase, C-terminal D3H41_15870 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain D3H41_15870 IPR013196 Helix-turn-helix, type 11 D3H41_15870 IPR036390 Winged helix DNA-binding domain superfamily D3H41_15870 IPR004409 Biotin operon repressor, helix-turn-helix domain D3H41_15875 IPR016169 FAD-binding, type PCMH, subdomain 2 D3H41_15875 IPR016166 FAD-binding domain, PCMH-type D3H41_15875 IPR036318 FAD-binding, type PCMH-like superfamily D3H41_15875 IPR016167 FAD-binding, type PCMH, subdomain 1 D3H41_15875 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase D3H41_15875 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal D3H41_15875 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily D3H41_15875 IPR006094 FAD linked oxidase, N-terminal D3H41_15885 IPR016270 CDP-alcohol phosphatidyltransferase class-II family D3H41_15885 IPR025202 Phospholipase D-like domain D3H41_15885 IPR001736 Phospholipase D/Transphosphatidylase D3H41_15940 IPR018187 Asp/Glu racemase, active site 1 D3H41_15940 IPR015942 Asp/Glu/hydantoin racemase D3H41_15940 IPR001920 Asp/Glu racemase D3H41_15940 IPR004391 Glutamate racemase D3H41_15950 IPR010917 TonB-dependent receptor, conserved site D3H41_15950 IPR037066 TonB-dependent receptor, plug domain superfamily D3H41_15950 IPR039426 Vitamin B12 transporter BtuB-like D3H41_15950 IPR012910 TonB-dependent receptor, plug domain D3H41_15950 IPR010916 TonB box, conserved site D3H41_15950 IPR000531 TonB-dependent receptor-like, beta-barrel D3H41_15950 IPR010101 TonB-dependent vitamin B12 transporter BtuB D3H41_15950 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D3H41_15955 IPR030390 RNA methyltransferase TrmA, active site D3H41_15955 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3H41_15955 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA D3H41_15955 IPR010280 (Uracil-5)-methyltransferase family D3H41_15955 IPR030391 RNA methyltransferase TrmA, conserved site D3H41_15965 IPR023764 Transcriptional repressor HTH, FabR D3H41_15965 IPR001647 DNA-binding HTH domain, TetR-type D3H41_15965 IPR009057 Homeobox-like domain superfamily D3H41_15970 IPR036188 FAD/NAD(P)-binding domain superfamily D3H41_15970 IPR023753 FAD/NAD(P)-binding domain D3H41_15970 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily D3H41_15970 IPR022962 Soluble pyridine nucleotide transhydrogenase D3H41_15970 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D3H41_15970 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I D3H41_15975 IPR002528 Multi antimicrobial extrusion protein D3H41_15980 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP D3H41_15980 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3H41_15980 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp D3H41_15990 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_15990 IPR036390 Winged helix DNA-binding domain superfamily D3H41_15990 IPR006200 Transcription regulator LexA D3H41_15990 IPR039418 LexA-like D3H41_15990 IPR006197 Peptidase S24, LexA-like D3H41_15990 IPR036286 LexA/Signal peptidase-like superfamily D3H41_15990 IPR015927 Peptidase S24/S26A/S26B/S26C D3H41_15990 IPR006199 LexA repressor, DNA-binding domain D3H41_16000 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB D3H41_16000 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase D3H41_16000 IPR002123 Phospholipid/glycerol acyltransferase D3H41_16000 IPR041728 GPAT/DHAPAT, acyltransferase domain D3H41_16005 IPR006370 4-hydroxybenzoate polyprenyltransferase-like D3H41_16005 IPR039653 Prenyltransferase D3H41_16005 IPR000537 UbiA prenyltransferase family D3H41_16010 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily D3H41_16010 IPR007440 Chorismate--pyruvate lyase D3H41_16015 IPR005503 Flagellar basal body-associated protein FliL D3H41_16020 IPR035952 Rhomboid-like superfamily D3H41_16020 IPR023662 Rhomboid protease GlpG D3H41_16020 IPR022764 Peptidase S54, rhomboid domain D3H41_16020 IPR022732 Peptidase S54, GlpG peptidase, N-terminal D3H41_16020 IPR038236 GlpG peptidase, N-terminal domain superfamily D3H41_16025 IPR036873 Rhodanese-like domain superfamily D3H41_16025 IPR023695 Thiosulfate sulfurtransferase, bacterial D3H41_16025 IPR001763 Rhodanese-like domain D3H41_16035 IPR000943 RNA polymerase sigma-70 D3H41_16035 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria D3H41_16035 IPR013324 RNA polymerase sigma factor, region 3/4-like D3H41_16035 IPR013325 RNA polymerase sigma factor, region 2 D3H41_16035 IPR007630 RNA polymerase sigma-70 region 4 D3H41_16035 IPR007627 RNA polymerase sigma-70 region 2 D3H41_16035 IPR014284 RNA polymerase sigma-70 like domain D3H41_16035 IPR009042 RNA polymerase sigma-70 region 1.2 D3H41_16040 IPR004513 Cell division protein FtsX D3H41_16040 IPR040690 FtsX, extracellular domain D3H41_16045 IPR003593 AAA+ ATPase domain D3H41_16045 IPR003439 ABC transporter-like D3H41_16045 IPR005286 Cell division protein FtsE, ATP-binding D3H41_16045 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_16045 IPR017871 ABC transporter, conserved site D3H41_16050 IPR003593 AAA+ ATPase domain D3H41_16050 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain D3H41_16050 IPR036225 SRP/SRP receptor, N-terminal D3H41_16050 IPR004390 Signal-recognition particle receptor FtsY D3H41_16050 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily D3H41_16050 IPR013822 Signal recognition particle SRP54, helical bundle D3H41_16050 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_16055 IPR002052 DNA methylase, N-6 adenine-specific, conserved site D3H41_16055 IPR004398 RNA methyltransferase, RsmD D3H41_16055 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3H41_16065 IPR002771 Multiple antibiotic resistance (MarC)-related D3H41_16090 IPR019635 Protein of unknown function DUF2500 D3H41_16110 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain D3H41_16110 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I D3H41_16110 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site D3H41_16110 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family D3H41_16110 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain D3H41_16110 IPR036291 NAD(P)-binding domain superfamily D3H41_16115 IPR036390 Winged helix DNA-binding domain superfamily D3H41_16115 IPR011991 ArsR-like helix-turn-helix domain D3H41_16115 IPR001845 HTH ArsR-type DNA-binding domain D3H41_16115 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_16120 IPR035919 EAL domain superfamily D3H41_16120 IPR001633 EAL domain D3H41_16120 IPR013976 Metal-dependent hydrolase HDOD D3H41_16120 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing D3H41_16125 IPR001123 Amino acid exporter protein, LeuE-type D3H41_16130 IPR029058 Alpha/Beta hydrolase fold D3H41_16130 IPR022742 Serine aminopeptidase, S33 D3H41_16135 IPR023214 HAD superfamily D3H41_16135 IPR006379 HAD-superfamily hydrolase, subfamily IIB D3H41_16135 IPR036412 HAD-like superfamily D3H41_16135 IPR000150 Cof family D3H41_16155 IPR013702 FIST domain, N-terminal D3H41_16155 IPR001633 EAL domain D3H41_16155 IPR035919 EAL domain superfamily D3H41_16155 IPR019494 FIST, C-domain D3H41_16155 IPR029787 Nucleotide cyclase D3H41_16155 IPR000160 GGDEF domain D3H41_16160 IPR023214 HAD superfamily D3H41_16160 IPR041492 Haloacid dehalogenase-like hydrolase D3H41_16160 IPR006439 HAD hydrolase, subfamily IA D3H41_16160 IPR036412 HAD-like superfamily D3H41_16165 IPR011010 DNA breaking-rejoining enzyme, catalytic core D3H41_16165 IPR010998 Integrase/recombinase, N-terminal D3H41_16165 IPR002104 Integrase, catalytic domain D3H41_16165 IPR004107 Integrase, SAM-like, N-terminal D3H41_16165 IPR023009 Tyrosine recombinase XerC/XerD D3H41_16165 IPR011931 Tyrosine recombinase XerC D3H41_16165 IPR013762 Integrase-like, catalytic domain superfamily D3H41_16175 IPR001653 Diaminopimelate epimerase, DapF D3H41_16175 IPR018510 Diaminopimelate epimerase, active site D3H41_16180 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site D3H41_16180 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site D3H41_16180 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal D3H41_16180 IPR000183 Ornithine/DAP/Arg decarboxylase D3H41_16180 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal D3H41_16180 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal D3H41_16180 IPR002986 Diaminopimelate decarboxylase, LysA D3H41_16180 IPR029066 PLP-binding barrel D3H41_16190 IPR036524 Frataxin/CyaY superfamily D3H41_16190 IPR002908 Frataxin/CyaY D3H41_16190 IPR020895 Frataxin conserved site D3H41_16195 IPR000274 Adenylate cyclase, class-I D3H41_16195 IPR024686 Adenylate cyclase class-I, conserved site D3H41_16195 IPR024685 Adenylate cyclase class-I, N-terminal domain D3H41_16200 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily D3H41_16200 IPR022418 Porphobilinogen deaminase, C-terminal D3H41_16200 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site D3H41_16200 IPR000860 Porphobilinogen deaminase D3H41_16200 IPR022417 Porphobilinogen deaminase, N-terminal D3H41_16205 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily D3H41_16205 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase D3H41_16205 IPR039793 Uroporphyrinogen-III synthase D3H41_16210 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX D3H41_16215 IPR005254 Heme biosynthesis-associated TPR protein D3H41_16215 IPR010817 HemY, N-terminal D3H41_16215 IPR011990 Tetratricopeptide-like helical domain superfamily D3H41_16255 IPR017927 FAD-binding domain, ferredoxin reductase-type D3H41_16255 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain D3H41_16255 IPR017938 Riboflavin synthase-like beta-barrel D3H41_16255 IPR001433 Oxidoreductase FAD/NAD(P)-binding D3H41_16260 IPR018298 Adrenodoxin, iron-sulphur binding site D3H41_16260 IPR036010 2Fe-2S ferredoxin-like superfamily D3H41_16260 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain D3H41_16260 IPR001055 Adrenodoxin D3H41_16260 IPR012675 Beta-grasp domain superfamily D3H41_16260 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria D3H41_16265 IPR002830 UbiD decarboxylyase family D3H41_16275 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain D3H41_16275 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_16275 IPR012340 Nucleic acid-binding, OB-fold D3H41_16275 IPR011112 Rho termination factor, N-terminal D3H41_16275 IPR003593 AAA+ ATPase domain D3H41_16275 IPR004665 Transcription termination factor Rho D3H41_16275 IPR041703 Transcription termination factor Rho, ATP binding domain D3H41_16275 IPR036269 Rho termination factor, N-terminal domain superfamily D3H41_16275 IPR011129 Cold shock domain D3H41_16275 IPR011113 Rho termination factor, RNA-binding domain D3H41_16280 IPR005746 Thioredoxin D3H41_16280 IPR013766 Thioredoxin domain D3H41_16280 IPR017937 Thioredoxin, conserved site D3H41_16280 IPR036249 Thioredoxin-like superfamily D3H41_16285 IPR014001 Helicase superfamily 1/2, ATP-binding domain D3H41_16285 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_16285 IPR023554 ATP-dependent RNA helicase RhlB type D3H41_16285 IPR011545 DEAD/DEAH box helicase domain D3H41_16285 IPR014014 RNA helicase, DEAD-box type, Q motif D3H41_16285 IPR001650 Helicase, C-terminal D3H41_16285 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site D3H41_16290 IPR030673 Pyrophosphatase, GppA/Ppx-type D3H41_16290 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase D3H41_16290 IPR003695 Ppx/GppA phosphatase D3H41_16300 IPR003744 Queuosine precursor transporter D3H41_16315 IPR010997 HRDC-like superfamily D3H41_16315 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_16315 IPR018982 RQC domain D3H41_16315 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain D3H41_16315 IPR014001 Helicase superfamily 1/2, ATP-binding domain D3H41_16315 IPR004589 DNA helicase, ATP-dependent, RecQ type D3H41_16315 IPR001650 Helicase, C-terminal D3H41_16315 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_16315 IPR002121 HRDC domain D3H41_16315 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial D3H41_16315 IPR011545 DEAD/DEAH box helicase domain D3H41_16320 IPR000620 EamA domain D3H41_16320 IPR004626 RarD protein D3H41_16330 IPR001123 Amino acid exporter protein, LeuE-type D3H41_16330 IPR004778 Homoserine/Threonine efflux protein D3H41_16335 IPR029055 Nucleophile aminohydrolases, N-terminal D3H41_16335 IPR000101 Gamma-glutamyltranspeptidase D3H41_16345 IPR014016 UvrD-like helicase, ATP-binding domain D3H41_16345 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_16345 IPR000212 DNA helicase, UvrD/REP type D3H41_16345 IPR014017 UvrD-like DNA helicase, C-terminal D3H41_16345 IPR005753 DNA helicase, ATP-dependent, UvrD type D3H41_16345 IPR013986 DExx box DNA helicase domain superfamily D3H41_16345 IPR034739 UvrD/AddA helicase, N-terminal D3H41_16355 IPR007801 Uncharacterised protein family UPF0276 D3H41_16355 IPR036237 Xylose isomerase-like superfamily D3H41_16375 IPR036259 MFS transporter superfamily D3H41_16375 IPR020846 Major facilitator superfamily domain D3H41_16375 IPR023697 Multidrug resistance protein MdtL D3H41_16375 IPR011701 Major facilitator superfamily D3H41_16380 IPR005119 LysR, substrate-binding D3H41_16380 IPR000847 Transcription regulator HTH, LysR D3H41_16380 IPR023746 Transcription regulator HTH, YidZ D3H41_16380 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_16380 IPR036390 Winged helix DNA-binding domain superfamily D3H41_16380 IPR037402 HTH-type transcriptional regulator YidZ, PBP2 domain D3H41_16385 IPR000587 Creatinase, N-terminal D3H41_16385 IPR036005 Creatinase/aminopeptidase-like D3H41_16385 IPR000994 Peptidase M24 D3H41_16385 IPR001714 Peptidase M24, methionine aminopeptidase D3H41_16385 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal D3H41_16385 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site D3H41_16385 IPR036005 Creatinase/aminopeptidase-like D3H41_16385 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal D3H41_16385 IPR000994 Peptidase M24 D3H41_16385 IPR001714 Peptidase M24, methionine aminopeptidase D3H41_16385 IPR000587 Creatinase, N-terminal D3H41_16385 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site D3H41_16390 IPR013785 Aldolase-type TIM barrel D3H41_16390 IPR010722 Biotin and thiamin synthesis-associated domain D3H41_16390 IPR007197 Radical SAM D3H41_16390 IPR012726 Thiazole biosynthesis ThiH D3H41_16390 IPR034428 ThiH/NocL/HydG-like D3H41_16395 IPR008867 Thiazole synthase D3H41_16395 IPR033983 Thiazole synthase ThiG D3H41_16395 IPR013785 Aldolase-type TIM barrel D3H41_16400 IPR012675 Beta-grasp domain superfamily D3H41_16400 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp D3H41_16400 IPR003749 Sulfur carrier ThiS/MoaD-like D3H41_16400 IPR010035 ThiS, thiamine-biosynthesis D3H41_16405 IPR000594 THIF-type NAD/FAD binding fold D3H41_16405 IPR035985 Ubiquitin-activating enzyme D3H41_16405 IPR012731 Thiazole biosynthesis adenylyltransferase ThiF D3H41_16410 IPR013785 Aldolase-type TIM barrel D3H41_16410 IPR036206 Thiamin phosphate synthase superfamily D3H41_16410 IPR022998 Thiamine phosphate synthase/TenI D3H41_16410 IPR034291 Thiamine phosphate synthase D3H41_16415 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B D3H41_16415 IPR038521 ThiC/Bza superfamily D3H41_16415 IPR025747 ThiC-associated domain D3H41_16415 IPR037509 Phosphomethylpyrimidine synthase D3H41_16420 IPR003691 Putative fluoride ion transporter CrcB D3H41_16425 IPR034279 Copper resistance protein, third cupredoxin domain D3H41_16425 IPR006311 Twin-arginine translocation pathway, signal sequence D3H41_16425 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal D3H41_16425 IPR008972 Cupredoxin D3H41_16425 IPR006376 Copper-resistance protein CopA D3H41_16425 IPR033138 Multicopper oxidases, conserved site D3H41_16425 IPR002355 Multicopper oxidase, copper-binding site D3H41_16425 IPR034282 Copper resistance protein CopA, second cupredoxin domain D3H41_16425 IPR034284 Copper resistance protein, first cupredoxin domain D3H41_16425 IPR001117 Multicopper oxidase, type 1 D3H41_16425 IPR011706 Multicopper oxidase, type 2 D3H41_16425 IPR011707 Multicopper oxidase, type 3 D3H41_16470 IPR011004 Trimeric LpxA-like superfamily D3H41_16470 IPR001451 Hexapeptide repeat D3H41_16475 IPR036692 Shew3726-like superfamily D3H41_16475 IPR009962 Protein of unknown function DUF1488 D3H41_16480 IPR036291 NAD(P)-binding domain superfamily D3H41_16480 IPR041121 SDH, C-terminal D3H41_16480 IPR011342 Shikimate dehydrogenase D3H41_16480 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal D3H41_16480 IPR022893 Shikimate dehydrogenase family D3H41_16480 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase D3H41_16485 IPR001260 Coproporphyrinogen III oxidase, aerobic D3H41_16485 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily D3H41_16485 IPR018375 Coproporphyrinogen III oxidase, conserved site D3H41_16490 IPR023535 Threonylcarbamoyl-AMP synthase D3H41_16490 IPR006070 YrdC-like domain D3H41_16490 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily D3H41_16495 IPR024694 PurE, prokaryotic type D3H41_16495 IPR035893 PurE domain superfamily D3H41_16495 IPR033747 Class I PurE D3H41_16495 IPR000031 PurE domain D3H41_16500 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain D3H41_16500 IPR011761 ATP-grasp fold D3H41_16500 IPR011054 Rudiment single hybrid motif D3H41_16500 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type D3H41_16500 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit D3H41_16500 IPR016185 Pre-ATP-grasp domain superfamily D3H41_16500 IPR013815 ATP-grasp fold, subdomain 1 D3H41_16505 IPR036515 Transposase IS200-like superfamily D3H41_16505 IPR002686 Transposase IS200-like D3H41_16510 IPR000380 DNA topoisomerase, type IA D3H41_16510 IPR013498 DNA topoisomerase, type IA, zn finger D3H41_16520 IPR007456 Smg D3H41_16525 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_16525 IPR041614 DprA, winged helix domain D3H41_16525 IPR003488 DNA recombination-mediator protein A D3H41_16535 IPR036821 Peptide deformylase superfamily D3H41_16535 IPR023635 Peptide deformylase D3H41_16540 IPR002376 Formyl transferase, N-terminal D3H41_16540 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain D3H41_16540 IPR005794 Methionyl-tRNA formyltransferase D3H41_16540 IPR037022 Formyl transferase, C-terminal domain superfamily D3H41_16540 IPR036477 Formyl transferase, N-terminal domain superfamily D3H41_16540 IPR011034 Formyl transferase-like, C-terminal domain superfamily D3H41_16540 IPR001555 Phosphoribosylglycinamide formyltransferase, active site D3H41_16540 IPR005793 Formyl transferase, C-terminal D3H41_16545 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3H41_16545 IPR004573 rRNA small subunit methyltransferase B D3H41_16545 IPR023267 RNA (C5-cytosine) methyltransferase D3H41_16545 IPR006027 NusB/RsmB/TIM44 D3H41_16545 IPR035926 NusB-like superfamily D3H41_16545 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type D3H41_16545 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site D3H41_16550 IPR006036 Potassium uptake protein TrkA D3H41_16550 IPR036291 NAD(P)-binding domain superfamily D3H41_16550 IPR006037 Regulator of K+ conductance, C-terminal D3H41_16550 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily D3H41_16550 IPR003148 Regulator of K+ conductance, N-terminal D3H41_16555 IPR004772 TrkH potassium transport family D3H41_16555 IPR003445 Cation transporter D3H41_16565 IPR005744 Hly-III D3H41_16565 IPR004254 AdipoR/Haemolysin-III-related D3H41_16570 IPR014756 Immunoglobulin E-set D3H41_16570 IPR014752 Arrestin, C-terminal D3H41_16570 IPR009776 Sporulation stage 0, protein M D3H41_16580 IPR038134 YihD-like superfamily D3H41_16580 IPR009383 Protein of unknown function DUF1040 D3H41_16585 IPR013783 Immunoglobulin-like fold D3H41_16585 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG D3H41_16585 IPR032879 FixG, C-terminal immunoglobulin-like domain D3H41_16585 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site D3H41_16585 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain D3H41_16590 IPR032882 SrkA/RdoA protein kinase D3H41_16590 IPR011009 Protein kinase-like domain superfamily D3H41_16590 IPR002575 Aminoglycoside phosphotransferase D3H41_16595 IPR013766 Thioredoxin domain D3H41_16595 IPR036249 Thioredoxin-like superfamily D3H41_16595 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL D3H41_16595 IPR001853 DSBA-like thioredoxin domain D3H41_16600 IPR002123 Phospholipid/glycerol acyltransferase D3H41_16610 IPR004482 Mg chelatase-related protein D3H41_16610 IPR000523 Magnesium chelatase ChlI domain D3H41_16610 IPR025158 Mg chelatase-related protein, C-terminal domain D3H41_16610 IPR003593 AAA+ ATPase domain D3H41_16610 IPR001208 MCM domain D3H41_16610 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_16610 IPR020568 Ribosomal protein S5 domain 2-type fold D3H41_16610 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D3H41_16615 IPR029035 DHS-like NAD/FAD-binding domain superfamily D3H41_16615 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding D3H41_16615 IPR000399 TPP-binding enzyme, conserved site D3H41_16615 IPR012000 Thiamine pyrophosphate enzyme, central domain D3H41_16615 IPR029061 Thiamin diphosphate-binding fold D3H41_16615 IPR039368 Acetolactate synthase large subunit, TPP binding domain D3H41_16615 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain D3H41_16615 IPR012846 Acetolactate synthase, large subunit, biosynthetic D3H41_16620 IPR002912 ACT domain D3H41_16625 IPR001544 Aminotransferase class IV D3H41_16625 IPR036038 Aminotransferase-like, PLP-dependent enzymes D3H41_16625 IPR033939 Branched-chain aminotransferase D3H41_16625 IPR005785 Branched-chain amino acid aminotransferase I D3H41_16625 IPR018300 Aminotransferase, class IV, conserved site D3H41_16630 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site D3H41_16630 IPR037237 IlvD/EDD, N-terminal domain D3H41_16630 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase D3H41_16630 IPR004404 Dihydroxy-acid dehydratase D3H41_16630 IPR042096 Dihydroxy-acid dehydratase, C-terminal D3H41_16635 IPR038110 Threonine dehydratase, ACT-like domain superfamily D3H41_16635 IPR005787 Threonine dehydratase, biosynthetic D3H41_16635 IPR001926 Pyridoxal-phosphate dependent enzyme D3H41_16635 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme D3H41_16635 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site D3H41_16635 IPR001721 Threonine dehydratase, ACT-like domain D3H41_16640 IPR000847 Transcription regulator HTH, LysR D3H41_16640 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_16640 IPR005119 LysR, substrate-binding D3H41_16640 IPR036390 Winged helix DNA-binding domain superfamily D3H41_16645 IPR011701 Major facilitator superfamily D3H41_16645 IPR004812 Drug resistance transporter Bcr/CmlA subfamily D3H41_16645 IPR020846 Major facilitator superfamily domain D3H41_16645 IPR036259 MFS transporter superfamily D3H41_16650 IPR037298 Cyclohexadienyl dehydratase pheC D3H41_16650 IPR018313 Solute-binding protein family 3, conserved site D3H41_16650 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF D3H41_16655 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain D3H41_16655 IPR000515 ABC transporter type 1, transmembrane domain MetI-like D3H41_16655 IPR035906 MetI-like superfamily D3H41_16660 IPR001451 Hexapeptide repeat D3H41_16660 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase D3H41_16660 IPR038009 GlmU, C-terminal LbH domain D3H41_16660 IPR018357 Hexapeptide transferase, conserved site D3H41_16660 IPR025877 MobA-like NTP transferase D3H41_16660 IPR029044 Nucleotide-diphospho-sugar transferases D3H41_16660 IPR011004 Trimeric LpxA-like superfamily D3H41_16665 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal D3H41_16665 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily D3H41_16665 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal D3H41_16665 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain D3H41_16665 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit D3H41_16670 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal D3H41_16670 IPR003593 AAA+ ATPase domain D3H41_16670 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain D3H41_16670 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily D3H41_16670 IPR005722 ATP synthase, F1 complex, beta subunit D3H41_16670 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_16670 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site D3H41_16670 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain D3H41_16675 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily D3H41_16675 IPR000131 ATP synthase, F1 complex, gamma subunit D3H41_16675 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site D3H41_16680 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily D3H41_16680 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain D3H41_16680 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_16680 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain D3H41_16680 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site D3H41_16680 IPR005294 ATP synthase, F1 complex, alpha subunit D3H41_16680 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily D3H41_16680 IPR000793 ATP synthase, alpha subunit, C-terminal D3H41_16680 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily D3H41_16680 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain D3H41_16685 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily D3H41_16685 IPR000711 ATPase, OSCP/delta subunit D3H41_16685 IPR020781 ATPase, OSCP/delta subunit, conserved site D3H41_16690 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily D3H41_16690 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast D3H41_16690 IPR005864 ATP synthase, F0 complex, subunit b, bacterial D3H41_16695 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast D3H41_16695 IPR000454 ATP synthase, F0 complex, subunit C D3H41_16695 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site D3H41_16695 IPR002379 V-ATPase proteolipid subunit C-like domain D3H41_16695 IPR038662 F1F0 ATP synthase subunit C superfamily D3H41_16695 IPR035921 F/V-ATP synthase subunit C superfamily D3H41_16700 IPR023011 ATP synthase, F0 complex, subunit A, active site D3H41_16700 IPR035908 ATP synthase, F0 complex, subunit A superfamily D3H41_16700 IPR000568 ATP synthase, F0 complex, subunit A D3H41_16705 IPR005598 ATP synthase protein I D3H41_16710 IPR036086 ParB/Sulfiredoxin superfamily D3H41_16710 IPR003115 ParB/Sulfiredoxin D3H41_16710 IPR041468 ParB/Spo0J, HTH domain D3H41_16710 IPR004437 ParB/RepB/Spo0J partition protein D3H41_16715 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_16715 IPR025669 AAA domain D3H41_16720 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3H41_16720 IPR003682 rRNA small subunit methyltransferase G D3H41_16725 IPR026904 GidA associated domain 3 D3H41_16725 IPR020595 MnmG-related, conserved site D3H41_16725 IPR036188 FAD/NAD(P)-binding domain superfamily D3H41_16725 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG D3H41_16725 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related D3H41_16730 IPR008254 Flavodoxin/nitric oxide synthase D3H41_16730 IPR029039 Flavoprotein-like superfamily D3H41_16745 IPR001387 Cro/C1-type helix-turn-helix domain D3H41_16745 IPR010982 Lambda repressor-like, DNA-binding domain superfamily D3H41_16780 IPR003356 DNA methylase, adenine-specific D3H41_16780 IPR002052 DNA methylase, N-6 adenine-specific, conserved site D3H41_16780 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3H41_16780 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily D3H41_16785 IPR022625 Type-1 restriction enzyme R protein, C-terminal D3H41_16785 IPR014001 Helicase superfamily 1/2, ATP-binding domain D3H41_16785 IPR040980 SWI2/SNF2 ATPase D3H41_16785 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_16785 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal D3H41_16785 IPR004473 Restriction endonuclease, type I, HsdR D3H41_16815 IPR010998 Integrase/recombinase, N-terminal D3H41_16815 IPR002104 Integrase, catalytic domain D3H41_16815 IPR004107 Integrase, SAM-like, N-terminal D3H41_16815 IPR013762 Integrase-like, catalytic domain superfamily D3H41_16815 IPR011010 DNA breaking-rejoining enzyme, catalytic core D3H41_16815 IPR023009 Tyrosine recombinase XerC/XerD D3H41_16815 IPR011932 Tyrosine recombinase XerD D3H41_16820 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 D3H41_16820 IPR005225 Small GTP-binding protein domain D3H41_16820 IPR027368 tRNA modification GTPase MnmE domain 2 D3H41_16820 IPR004520 tRNA modification GTPase MnmE D3H41_16820 IPR025867 MnmE, helical domain D3H41_16820 IPR031168 TrmE-type guanine nucleotide-binding domain D3H41_16820 IPR018948 GTP-binding protein TrmE, N-terminal D3H41_16820 IPR006073 GTP binding domain D3H41_16820 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_16825 IPR019998 Membrane insertase YidC D3H41_16825 IPR038210 Membrane insertase YidC, periplasmic domain D3H41_16825 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 D3H41_16825 IPR028055 Membrane insertase YidC/Oxa1, C-terminal D3H41_16825 IPR028053 Membrane insertase YidC, N-terminal D3H41_16825 IPR038221 YidC, periplasmic domain superfamily D3H41_16830 IPR002696 Putative membrane protein insertion efficiency factor D3H41_16835 IPR020568 Ribosomal protein S5 domain 2-type fold D3H41_16835 IPR020539 Ribonuclease P, conserved site D3H41_16835 IPR000100 Ribonuclease P D3H41_16835 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D3H41_16840 IPR000271 Ribosomal protein L34 D3H41_16840 IPR020939 Ribosomal protein L34, conserved site D3H41_16845 IPR017871 ABC transporter, conserved site D3H41_16845 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_16845 IPR003439 ABC transporter-like D3H41_16845 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type D3H41_16845 IPR003593 AAA+ ATPase domain D3H41_16850 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain D3H41_16850 IPR035906 MetI-like superfamily D3H41_16850 IPR000515 ABC transporter type 1, transmembrane domain MetI-like D3H41_16855 IPR001320 Ionotropic glutamate receptor D3H41_16855 IPR018313 Solute-binding protein family 3, conserved site D3H41_16855 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF D3H41_16870 IPR002781 Transmembrane protein TauE-like D3H41_16880 IPR001650 Helicase, C-terminal D3H41_16880 IPR011545 DEAD/DEAH box helicase domain D3H41_16880 IPR014014 RNA helicase, DEAD-box type, Q motif D3H41_16880 IPR014001 Helicase superfamily 1/2, ATP-binding domain D3H41_16880 IPR028622 ATP-dependent RNA helicase RhlE D3H41_16880 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_16880 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site D3H41_16885 IPR018668 DNA-binding protein VF530-like D3H41_16885 IPR036361 SAP domain superfamily D3H41_16895 IPR006654 Tryptophan synthase, beta chain D3H41_16895 IPR023026 Tryptophan synthase beta chain/beta chain-like D3H41_16895 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme D3H41_16895 IPR006653 Tryptophan synthase, beta chain, conserved site D3H41_16895 IPR001926 Pyridoxal-phosphate dependent enzyme D3H41_16905 IPR012340 Nucleic acid-binding, OB-fold D3H41_16905 IPR002059 Cold-shock protein, DNA-binding D3H41_16905 IPR019844 Cold-shock (CSD) domain D3H41_16905 IPR011129 Cold shock domain D3H41_16905 IPR012156 Cold shock, CspA D3H41_16915 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily D3H41_16915 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like D3H41_16915 IPR000816 Peptidase C15, pyroglutamyl peptidase I D3H41_16915 IPR029762 Pyroglutamyl peptidase I, bacterial-type D3H41_16915 IPR033693 Pyroglutamyl peptidase I, Glu active site D3H41_16915 IPR033694 Pyroglutamyl peptidase I, Cys active site D3H41_16925 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_16925 IPR003495 CobW/HypB/UreG, nucleotide-binding domain D3H41_16925 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal D3H41_16930 IPR014014 RNA helicase, DEAD-box type, Q motif D3H41_16930 IPR011545 DEAD/DEAH box helicase domain D3H41_16930 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_16930 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site D3H41_16930 IPR001650 Helicase, C-terminal D3H41_16930 IPR014001 Helicase superfamily 1/2, ATP-binding domain D3H41_16930 IPR028622 ATP-dependent RNA helicase RhlE D3H41_16950 IPR001633 EAL domain D3H41_16950 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain D3H41_16950 IPR035919 EAL domain superfamily D3H41_16955 IPR003593 AAA+ ATPase domain D3H41_16955 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_16955 IPR003439 ABC transporter-like D3H41_16960 IPR004090 Chemotaxis methyl-accepting receptor D3H41_16960 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain D3H41_16960 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain D3H41_16960 IPR000727 Target SNARE coiled-coil homology domain D3H41_16960 IPR003660 HAMP domain D3H41_16980 IPR024370 PBP domain D3H41_16980 IPR011862 Phosphate binding protein D3H41_16990 IPR017853 Glycoside hydrolase superfamily D3H41_16990 IPR037923 Transcription regulator HTH-like D3H41_16990 IPR020449 Transcription regulator HTH, AraC- type D3H41_16990 IPR018060 DNA binding HTH domain, AraC-type D3H41_16990 IPR009057 Homeobox-like domain superfamily D3H41_16995 IPR013223 Ribonuclease B, N-terminal OB domain D3H41_16995 IPR012340 Nucleic acid-binding, OB-fold D3H41_16995 IPR011129 Cold shock domain D3H41_16995 IPR004476 Ribonuclease II/ribonuclease R D3H41_16995 IPR001900 Ribonuclease II/R D3H41_16995 IPR011804 Ribonuclease II D3H41_16995 IPR022966 Ribonuclease II/R, conserved site D3H41_16995 IPR003029 S1 domain D3H41_17000 IPR001650 Helicase, C-terminal D3H41_17000 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain D3H41_17000 IPR011545 DEAD/DEAH box helicase domain D3H41_17000 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily D3H41_17000 IPR034415 CsdA, RNA recognition motif D3H41_17000 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_17000 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site D3H41_17000 IPR028618 ATP-dependent RNA helicase DeaD D3H41_17000 IPR014001 Helicase superfamily 1/2, ATP-binding domain D3H41_17000 IPR014014 RNA helicase, DEAD-box type, Q motif D3H41_17010 IPR001633 EAL domain D3H41_17010 IPR000160 GGDEF domain D3H41_17010 IPR005330 MHYT domain D3H41_17010 IPR029787 Nucleotide cyclase D3H41_17010 IPR035919 EAL domain superfamily D3H41_17020 IPR004372 Acetate/propionate kinase D3H41_17020 IPR000890 Aliphatic acid kinase, short-chain D3H41_17020 IPR023865 Aliphatic acid kinase, short-chain, conserved site D3H41_17025 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_17025 IPR036390 Winged helix DNA-binding domain superfamily D3H41_17025 IPR005119 LysR, substrate-binding D3H41_17025 IPR000847 Transcription regulator HTH, LysR D3H41_17030 IPR022742 Serine aminopeptidase, S33 D3H41_17030 IPR029058 Alpha/Beta hydrolase fold D3H41_17035 IPR029058 Alpha/Beta hydrolase fold D3H41_17035 IPR022742 Serine aminopeptidase, S33 D3H41_17055 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain D3H41_17055 IPR019888 Transcription regulator AsnC-type D3H41_17055 IPR011991 ArsR-like helix-turn-helix domain D3H41_17055 IPR011008 Dimeric alpha-beta barrel D3H41_17055 IPR000485 AsnC-type HTH domain D3H41_17055 IPR036390 Winged helix DNA-binding domain superfamily D3H41_17055 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_17060 IPR013154 Alcohol dehydrogenase, N-terminal D3H41_17060 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site D3H41_17060 IPR011032 GroES-like superfamily D3H41_17060 IPR036291 NAD(P)-binding domain superfamily D3H41_17060 IPR020843 Polyketide synthase, enoylreductase domain D3H41_17060 IPR013149 Alcohol dehydrogenase, C-terminal D3H41_17065 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily D3H41_17065 IPR000304 Pyrroline-5-carboxylate reductase D3H41_17065 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain D3H41_17065 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal D3H41_17065 IPR036291 NAD(P)-binding domain superfamily D3H41_17075 IPR000014 PAS domain D3H41_17075 IPR004090 Chemotaxis methyl-accepting receptor D3H41_17075 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain D3H41_17075 IPR001610 PAC motif D3H41_17075 IPR013655 PAS fold-3 D3H41_17075 IPR035965 PAS domain superfamily D3H41_17075 IPR000700 PAS-associated, C-terminal D3H41_17080 IPR000515 ABC transporter type 1, transmembrane domain MetI-like D3H41_17080 IPR035906 MetI-like superfamily D3H41_17085 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_17085 IPR000644 CBS domain D3H41_17085 IPR017871 ABC transporter, conserved site D3H41_17085 IPR003439 ABC transporter-like D3H41_17085 IPR003593 AAA+ ATPase domain D3H41_17085 IPR005892 Glycine betaine transport ATP-binding subunit D3H41_17090 IPR035906 MetI-like superfamily D3H41_17090 IPR000515 ABC transporter type 1, transmembrane domain MetI-like D3H41_17095 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain D3H41_17110 IPR029062 Class I glutamine amidotransferase-like D3H41_17110 IPR002818 DJ-1/PfpI D3H41_17110 IPR009057 Homeobox-like domain superfamily D3H41_17110 IPR018060 DNA binding HTH domain, AraC-type D3H41_17110 IPR018062 HTH domain AraC-type, conserved site D3H41_17115 IPR000073 Alpha/beta hydrolase fold-1 D3H41_17115 IPR029058 Alpha/Beta hydrolase fold D3H41_17120 IPR032466 Metal-dependent hydrolase D3H41_17120 IPR006680 Amidohydrolase-related D3H41_17125 IPR006094 FAD linked oxidase, N-terminal D3H41_17125 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain D3H41_17125 IPR009051 Alpha-helical ferredoxin D3H41_17125 IPR004113 FAD-linked oxidase, C-terminal D3H41_17125 IPR016164 FAD-linked oxidase-like, C-terminal D3H41_17125 IPR036318 FAD-binding, type PCMH-like superfamily D3H41_17125 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site D3H41_17125 IPR016166 FAD-binding domain, PCMH-type D3H41_17135 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site D3H41_17135 IPR013785 Aldolase-type TIM barrel D3H41_17135 IPR000891 Pyruvate carboxyltransferase D3H41_17140 IPR014748 Enoyl-CoA hydratase, C-terminal D3H41_17140 IPR029045 ClpP/crotonase-like domain superfamily D3H41_17140 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site D3H41_17140 IPR001753 Enoyl-CoA hydratase/isomerase D3H41_17145 IPR034733 Acetyl-CoA carboxylase D3H41_17145 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal D3H41_17145 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal D3H41_17145 IPR029045 ClpP/crotonase-like domain superfamily D3H41_17150 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily D3H41_17150 IPR006089 Acyl-CoA dehydrogenase, conserved site D3H41_17150 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal D3H41_17150 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal D3H41_17150 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain D3H41_17150 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal D3H41_17150 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily D3H41_17155 IPR009061 Putative DNA-binding domain superfamily D3H41_17155 IPR000551 MerR-type HTH domain D3H41_17155 IPR015358 Transcription regulator MerR, DNA binding D3H41_17155 IPR011789 Cu(I)-responsive transcriptional regulator D3H41_17160 IPR002155 Thiolase D3H41_17160 IPR020613 Thiolase, conserved site D3H41_17160 IPR016039 Thiolase-like D3H41_17160 IPR020610 Thiolase, active site D3H41_17160 IPR020615 Thiolase, acyl-enzyme intermediate active site D3H41_17160 IPR020616 Thiolase, N-terminal D3H41_17160 IPR020617 Thiolase, C-terminal D3H41_17165 IPR015590 Aldehyde dehydrogenase domain D3H41_17165 IPR016163 Aldehyde dehydrogenase, C-terminal D3H41_17165 IPR016160 Aldehyde dehydrogenase, cysteine active site D3H41_17165 IPR010061 Methylmalonate-semialdehyde dehydrogenase D3H41_17165 IPR016161 Aldehyde/histidinol dehydrogenase D3H41_17165 IPR016162 Aldehyde dehydrogenase, N-terminal D3H41_17175 IPR001753 Enoyl-CoA hydratase/isomerase D3H41_17175 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site D3H41_17175 IPR029045 ClpP/crotonase-like domain superfamily D3H41_17175 IPR014748 Enoyl-CoA hydratase, C-terminal D3H41_17180 IPR029045 ClpP/crotonase-like domain superfamily D3H41_17180 IPR014748 Enoyl-CoA hydratase, C-terminal D3H41_17180 IPR001753 Enoyl-CoA hydratase/isomerase D3H41_17180 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site D3H41_17185 IPR013328 6-phosphogluconate dehydrogenase, domain 2 D3H41_17185 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily D3H41_17185 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site D3H41_17185 IPR015815 3-hydroxyisobutyrate dehydrogenase-related D3H41_17185 IPR036291 NAD(P)-binding domain superfamily D3H41_17185 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain D3H41_17185 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding D3H41_17185 IPR011548 3-hydroxyisobutyrate dehydrogenase D3H41_17190 IPR020904 Short-chain dehydrogenase/reductase, conserved site D3H41_17190 IPR036291 NAD(P)-binding domain superfamily D3H41_17190 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase D3H41_17190 IPR002347 Short-chain dehydrogenase/reductase SDR D3H41_17195 IPR008972 Cupredoxin D3H41_17195 IPR002429 Cytochrome c oxidase subunit II-like C-terminal D3H41_17195 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain D3H41_17195 IPR006333 Cytochrome o ubiquinol oxidase subunit II D3H41_17195 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily D3H41_17195 IPR010514 COX aromatic rich motif D3H41_17195 IPR034227 Ubiquinol oxidase subunit 2, cupredoxin domain D3H41_17200 IPR023616 Cytochrome c oxidase-like, subunit I domain D3H41_17200 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site D3H41_17200 IPR000883 Cytochrome c oxidase subunit I D3H41_17200 IPR036927 Cytochrome c oxidase-like, subunit I superfamily D3H41_17200 IPR014207 Cytochrome o ubiquinol oxidase, subunit I D3H41_17205 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle D3H41_17205 IPR000298 Cytochrome c oxidase subunit III-like D3H41_17205 IPR024791 Cytochrome c oxidase subunit III D3H41_17205 IPR014206 Cytochrome o ubiquinol oxidase, subunit III D3H41_17205 IPR035973 Cytochrome c oxidase subunit III-like superfamily D3H41_17205 IPR033946 Ubiquinol oxidase subunit III domain D3H41_17215 IPR030470 UbiA prenyltransferase conserved site D3H41_17215 IPR006369 Protohaem IX farnesyltransferase D3H41_17215 IPR000537 UbiA prenyltransferase family D3H41_17225 IPR023753 FAD/NAD(P)-binding domain D3H41_17225 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal D3H41_17225 IPR013785 Aldolase-type TIM barrel D3H41_17225 IPR036188 FAD/NAD(P)-binding domain superfamily D3H41_17240 IPR029510 Aldehyde dehydrogenase, glutamic acid active site D3H41_17240 IPR016160 Aldehyde dehydrogenase, cysteine active site D3H41_17240 IPR016163 Aldehyde dehydrogenase, C-terminal D3H41_17240 IPR016161 Aldehyde/histidinol dehydrogenase D3H41_17240 IPR015590 Aldehyde dehydrogenase domain D3H41_17240 IPR016162 Aldehyde dehydrogenase, N-terminal D3H41_17250 IPR000060 BCCT transporter family D3H41_17280 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type D3H41_17280 IPR003593 AAA+ ATPase domain D3H41_17280 IPR017871 ABC transporter, conserved site D3H41_17280 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_17280 IPR003439 ABC transporter-like D3H41_17285 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF D3H41_17285 IPR018313 Solute-binding protein family 3, conserved site D3H41_17285 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter D3H41_17285 IPR001320 Ionotropic glutamate receptor D3H41_17290 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain D3H41_17290 IPR000515 ABC transporter type 1, transmembrane domain MetI-like D3H41_17290 IPR035906 MetI-like superfamily D3H41_17295 IPR035906 MetI-like superfamily D3H41_17295 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain D3H41_17295 IPR000515 ABC transporter type 1, transmembrane domain MetI-like D3H41_17305 IPR036390 Winged helix DNA-binding domain superfamily D3H41_17305 IPR000847 Transcription regulator HTH, LysR D3H41_17305 IPR005119 LysR, substrate-binding D3H41_17305 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_17320 IPR036390 Winged helix DNA-binding domain superfamily D3H41_17320 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_17320 IPR000847 Transcription regulator HTH, LysR D3H41_17320 IPR005119 LysR, substrate-binding D3H41_17325 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain D3H41_17325 IPR040156 Electron transfer flavoprotein-ubiquinone oxidoreductase D3H41_17325 IPR036188 FAD/NAD(P)-binding domain superfamily D3H41_17330 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3H41_17330 IPR029035 DHS-like NAD/FAD-binding domain superfamily D3H41_17330 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal D3H41_17330 IPR001308 Electron transfer flavoprotein alpha subunit/FixB D3H41_17330 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal D3H41_17330 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal D3H41_17330 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site D3H41_17335 IPR036625 E3-binding domain superfamily D3H41_17335 IPR011053 Single hybrid motif D3H41_17335 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site D3H41_17335 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily D3H41_17335 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain D3H41_17335 IPR000089 Biotin/lipoyl attachment D3H41_17335 IPR004167 Peripheral subunit-binding domain D3H41_17340 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II D3H41_17340 IPR029061 Thiamin diphosphate-binding fold D3H41_17340 IPR033248 Transketolase, C-terminal domain D3H41_17340 IPR005475 Transketolase-like, pyrimidine-binding domain D3H41_17345 IPR029061 Thiamin diphosphate-binding fold D3H41_17345 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha D3H41_17345 IPR001017 Dehydrogenase, E1 component D3H41_17360 IPR001734 Sodium/solute symporter D3H41_17360 IPR038377 Sodium/glucose symporter superfamily D3H41_17365 IPR036397 Ribonuclease H superfamily D3H41_17365 IPR029460 DNA polymerase, helix-hairpin-helix motif D3H41_17365 IPR003141 Polymerase/histidinol phosphatase, N-terminal D3H41_17365 IPR004013 PHP domain D3H41_17365 IPR013520 Exonuclease, RNase T/DNA polymerase III D3H41_17365 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain D3H41_17365 IPR012337 Ribonuclease H-like superfamily D3H41_17365 IPR024754 DNA polymerase III polC-like, N-terminal domain II D3H41_17365 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain D3H41_17365 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type D3H41_17365 IPR012340 Nucleic acid-binding, OB-fold D3H41_17365 IPR040982 DNA polymerase III alpha subunit finger domain D3H41_17370 IPR000644 CBS domain D3H41_17375 IPR000524 Transcription regulator HTH, GntR D3H41_17375 IPR036390 Winged helix DNA-binding domain superfamily D3H41_17375 IPR011711 GntR, C-terminal D3H41_17375 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_17375 IPR008920 Transcription regulator FadR/GntR, C-terminal D3H41_17380 IPR011711 GntR, C-terminal D3H41_17380 IPR008920 Transcription regulator FadR/GntR, C-terminal D3H41_17380 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_17380 IPR036390 Winged helix DNA-binding domain superfamily D3H41_17380 IPR000524 Transcription regulator HTH, GntR D3H41_17390 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily D3H41_17390 IPR014895 Alginate lyase 2 D3H41_17405 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily D3H41_17405 IPR014895 Alginate lyase 2 D3H41_17410 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily D3H41_17410 IPR014895 Alginate lyase 2 D3H41_17415 IPR008397 Alginate lyase domain D3H41_17415 IPR012480 Heparinase II/III-like D3H41_17415 IPR008929 Chondroitin AC/alginate lyase D3H41_17420 IPR008397 Alginate lyase domain D3H41_17420 IPR012480 Heparinase II/III-like D3H41_17420 IPR008929 Chondroitin AC/alginate lyase D3H41_17425 IPR013096 Cupin 2, conserved barrel D3H41_17425 IPR011051 RmlC-like cupin domain superfamily D3H41_17425 IPR014710 RmlC-like jelly roll fold D3H41_17425 IPR025499 Pectin degradation protein KdgF D3H41_17430 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site D3H41_17430 IPR011611 Carbohydrate kinase PfkB D3H41_17430 IPR029056 Ribokinase-like D3H41_17435 IPR013785 Aldolase-type TIM barrel D3H41_17435 IPR000887 KDPG/KHG aldolase D3H41_17435 IPR031337 KDPG/KHG aldolase, active site 1 D3H41_17435 IPR031338 KDPG/KHG aldolase, active site 2 D3H41_17445 IPR006114 6-phosphogluconate dehydrogenase, C-terminal D3H41_17445 IPR013328 6-phosphogluconate dehydrogenase, domain 2 D3H41_17445 IPR036291 NAD(P)-binding domain superfamily D3H41_17445 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily D3H41_17445 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating D3H41_17445 IPR006183 6-phosphogluconate dehydrogenase D3H41_17445 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding D3H41_17445 IPR006184 6-phosphogluconate-binding site D3H41_17450 IPR036291 NAD(P)-binding domain superfamily D3H41_17450 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase D3H41_17450 IPR002347 Short-chain dehydrogenase/reductase SDR D3H41_17450 IPR020904 Short-chain dehydrogenase/reductase, conserved site D3H41_17455 IPR007410 Copper chaperone PCuAC D3H41_17455 IPR036182 Copper chaperone PCuAC superfamily D3H41_17490 IPR011006 CheY-like superfamily D3H41_17490 IPR001867 OmpR/PhoB-type DNA-binding domain D3H41_17490 IPR016032 Signal transduction response regulator, C-terminal effector D3H41_17490 IPR001789 Signal transduction response regulator, receiver domain D3H41_17490 IPR039420 Transcriptional regulatory protein WalR-like D3H41_17490 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_17510 IPR023828 Peptidase S8, subtilisin, Ser-active site D3H41_17510 IPR002884 P domain D3H41_17510 IPR000209 Peptidase S8/S53 domain D3H41_17510 IPR036852 Peptidase S8/S53 domain superfamily D3H41_17510 IPR023827 Peptidase S8, subtilisin, Asp-active site D3H41_17510 IPR015500 Peptidase S8, subtilisin-related D3H41_17510 IPR008979 Galactose-binding-like domain superfamily D3H41_17520 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region D3H41_17520 IPR029787 Nucleotide cyclase D3H41_17520 IPR000160 GGDEF domain D3H41_17530 IPR018227 Amino acid/polyamine transporter 2 D3H41_17530 IPR004694 Hydroxy amino acid transporter D3H41_17540 IPR009010 Aspartate decarboxylase-like domain superfamily D3H41_17540 IPR006656 Molybdopterin oxidoreductase D3H41_17540 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain D3H41_17540 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site D3H41_17540 IPR006657 Molybdopterin dinucleotide-binding domain D3H41_17545 IPR014777 Tetrapyrrole methylase, subdomain 1 D3H41_17545 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site D3H41_17545 IPR014776 Tetrapyrrole methylase, subdomain 2 D3H41_17545 IPR006366 Uroporphyrin-III C-methyltransferase D3H41_17545 IPR019478 Sirohaem synthase, dimerisation domain D3H41_17545 IPR037115 Sirohaem synthase, dimerisation domain superfamily D3H41_17545 IPR006367 Sirohaem synthase, N-terminal D3H41_17545 IPR028281 Siroheme synthase, central domain D3H41_17545 IPR036291 NAD(P)-binding domain superfamily D3H41_17545 IPR012409 Sirohaem synthase D3H41_17545 IPR035996 Tetrapyrrole methylase superfamily D3H41_17545 IPR000878 Tetrapyrrole methylase D3H41_17550 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily D3H41_17550 IPR005940 Anthranilate phosphoribosyl transferase D3H41_17550 IPR017459 Glycosyl transferase family 3, N-terminal domain D3H41_17550 IPR000312 Glycosyl transferase, family 3 D3H41_17550 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily D3H41_17555 IPR002925 Dienelactone hydrolase D3H41_17555 IPR029058 Alpha/Beta hydrolase fold D3H41_17560 IPR005561 ANTAR domain D3H41_17560 IPR010910 Nitrate/nitrite sensing protein, bacterial D3H41_17560 IPR013587 Nitrate/nitrite sensing protein D3H41_17560 IPR011006 CheY-like superfamily D3H41_17560 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_17570 IPR003439 ABC transporter-like D3H41_17570 IPR005890 Nitrate transport ATP-binding subunit C/D D3H41_17570 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_17570 IPR017871 ABC transporter, conserved site D3H41_17570 IPR003593 AAA+ ATPase domain D3H41_17575 IPR000515 ABC transporter type 1, transmembrane domain MetI-like D3H41_17575 IPR035906 MetI-like superfamily D3H41_17575 IPR005889 Nitrate transport permease D3H41_17580 IPR003593 AAA+ ATPase domain D3H41_17580 IPR003439 ABC transporter-like D3H41_17580 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_17580 IPR005890 Nitrate transport ATP-binding subunit C/D D3H41_17580 IPR017871 ABC transporter, conserved site D3H41_17585 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily D3H41_17585 IPR007419 BFD-like [2Fe-2S]-binding domain D3H41_17585 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily D3H41_17585 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB D3H41_17585 IPR036188 FAD/NAD(P)-binding domain superfamily D3H41_17585 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain D3H41_17585 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site D3H41_17585 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal D3H41_17585 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily D3H41_17585 IPR012748 Rieske-like [2Fe-2S] domain, NirD-type D3H41_17585 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain D3H41_17585 IPR023753 FAD/NAD(P)-binding domain D3H41_17615 IPR001789 Signal transduction response regulator, receiver domain D3H41_17615 IPR029787 Nucleotide cyclase D3H41_17615 IPR011006 CheY-like superfamily D3H41_17615 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase D3H41_17635 IPR008271 Serine/threonine-protein kinase, active site D3H41_17635 IPR017441 Protein kinase, ATP binding site D3H41_17635 IPR000719 Protein kinase domain D3H41_17635 IPR005543 PASTA domain D3H41_17635 IPR011009 Protein kinase-like domain superfamily D3H41_17655 IPR006665 OmpA-like domain D3H41_17655 IPR025713 Motility protein B, N-terminal domain D3H41_17655 IPR036737 OmpA-like domain superfamily D3H41_17670 IPR015655 Protein phosphatase 2C family D3H41_17670 IPR036457 PPM-type phosphatase domain superfamily D3H41_17670 IPR001932 PPM-type phosphatase domain D3H41_17715 IPR003593 AAA+ ATPase domain D3H41_17715 IPR003959 ATPase, AAA-type, core D3H41_17715 IPR036628 Clp, N-terminal domain superfamily D3H41_17715 IPR004176 Clp, N-terminal D3H41_17715 IPR001270 ClpA/B family D3H41_17715 IPR018368 ClpA/B, conserved site 1 D3H41_17715 IPR019489 Clp ATPase, C-terminal D3H41_17715 IPR017729 Type VI secretion system, ATPase ClpV1 D3H41_17715 IPR041546 ClpA/ClpB, AAA lid domain D3H41_17715 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_17725 IPR037026 Vgr protein, OB-fold domain superfamily D3H41_17725 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein D3H41_17725 IPR032074 Actin cross-linking domain D3H41_17725 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset D3H41_17725 IPR006531 Gp5 N-terminal D3H41_17740 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type D3H41_17740 IPR004593 Nuclease SbcCD subunit D D3H41_17740 IPR026843 Nuclease SbcCD subunit D, C-terminal domain D3H41_17740 IPR029052 Metallo-dependent phosphatase-like D3H41_17740 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain D3H41_17745 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_17745 IPR038729 Rad50/SbcC-type AAA domain D3H41_17755 IPR012674 Calycin D3H41_17755 IPR022271 Lipocalin, ApoD type D3H41_17755 IPR000566 Lipocalin/cytosolic fatty-acid binding domain D3H41_17755 IPR022272 Lipocalin family conserved site D3H41_17755 IPR002446 Lipocalin, bacterial D3H41_17765 IPR018385 C4-dicarboxylate anaerobic carrier-like D3H41_17775 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase D3H41_17775 IPR015424 Pyridoxal phosphate-dependent transferase D3H41_17775 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 D3H41_17775 IPR015421 Pyridoxal phosphate-dependent transferase, major domain D3H41_17775 IPR023603 Threonine aldolase D3H41_17785 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_17785 IPR022547 ATPase, RavA, C-terminal D3H41_17785 IPR011704 ATPase, dynein-related, AAA domain D3H41_17785 IPR003593 AAA+ ATPase domain D3H41_17785 IPR023671 ATPase RavA D3H41_17785 IPR041538 ATPase RavA-like, AAA lid domain D3H41_17790 IPR023481 Uncharacterised protein family ViaA D3H41_17790 IPR008912 Uncharacterised protein family CoxE-like D3H41_17790 IPR002035 von Willebrand factor, type A D3H41_17790 IPR036465 von Willebrand factor A-like domain superfamily D3H41_17805 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_17805 IPR036390 Winged helix DNA-binding domain superfamily D3H41_17805 IPR005119 LysR, substrate-binding D3H41_17805 IPR000847 Transcription regulator HTH, LysR D3H41_17810 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal D3H41_17810 IPR016164 FAD-linked oxidase-like, C-terminal D3H41_17810 IPR016169 FAD-binding, type PCMH, subdomain 2 D3H41_17810 IPR016167 FAD-binding, type PCMH, subdomain 1 D3H41_17810 IPR006094 FAD linked oxidase, N-terminal D3H41_17810 IPR036318 FAD-binding, type PCMH-like superfamily D3H41_17810 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 D3H41_17810 IPR012256 D-lactate dehydrogenase D3H41_17810 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 D3H41_17810 IPR016166 FAD-binding domain, PCMH-type D3H41_17825 IPR000821 Alanine racemase D3H41_17825 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal D3H41_17825 IPR011079 Alanine racemase, C-terminal D3H41_17825 IPR001608 Alanine racemase, N-terminal D3H41_17825 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site D3H41_17825 IPR029066 PLP-binding barrel D3H41_17830 IPR004090 Chemotaxis methyl-accepting receptor D3H41_17830 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain D3H41_17830 IPR003660 HAMP domain D3H41_17845 IPR013776 Alpha-amylase, thermostable D3H41_17845 IPR015237 Alpha-amylase C-terminal, prokaryotic D3H41_17845 IPR017853 Glycoside hydrolase superfamily D3H41_17845 IPR013780 Glycosyl hydrolase, all-beta D3H41_17845 IPR006047 Glycosyl hydrolase, family 13, catalytic domain D3H41_17905 IPR000014 PAS domain D3H41_17905 IPR001633 EAL domain D3H41_17905 IPR035919 EAL domain superfamily D3H41_17905 IPR029787 Nucleotide cyclase D3H41_17905 IPR035965 PAS domain superfamily D3H41_17905 IPR000160 GGDEF domain D3H41_17915 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain D3H41_17915 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal D3H41_17915 IPR028625 Regulator of nucleoside diphosphate kinase D3H41_17915 IPR023459 Transcription elongation factor GreA/GreB family D3H41_17915 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily D3H41_17920 IPR023753 FAD/NAD(P)-binding domain D3H41_17920 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain D3H41_17920 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain D3H41_17920 IPR017121 Nitrite reductase [NAD(P)H], large subunit D3H41_17920 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB D3H41_17920 IPR036188 FAD/NAD(P)-binding domain superfamily D3H41_17920 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site D3H41_17920 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal D3H41_17920 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily D3H41_17920 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily D3H41_17920 IPR007419 BFD-like [2Fe-2S]-binding domain D3H41_17925 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily D3H41_17925 IPR012748 Rieske-like [2Fe-2S] domain, NirD-type D3H41_17925 IPR017881 Nitrite reductase (NADH) small subunit D3H41_17930 IPR023999 Formate transporter FocA, putative D3H41_17930 IPR023271 Aquaporin-like D3H41_17930 IPR000292 Formate/nitrite transporter D3H41_17930 IPR024002 Formate/nitrite transporter, conserved site D3H41_17935 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site D3H41_17935 IPR006367 Sirohaem synthase, N-terminal D3H41_17935 IPR000878 Tetrapyrrole methylase D3H41_17935 IPR014777 Tetrapyrrole methylase, subdomain 1 D3H41_17935 IPR028281 Siroheme synthase, central domain D3H41_17935 IPR012409 Sirohaem synthase D3H41_17935 IPR037115 Sirohaem synthase, dimerisation domain superfamily D3H41_17935 IPR036291 NAD(P)-binding domain superfamily D3H41_17935 IPR006366 Uroporphyrin-III C-methyltransferase D3H41_17935 IPR014776 Tetrapyrrole methylase, subdomain 2 D3H41_17935 IPR019478 Sirohaem synthase, dimerisation domain D3H41_17935 IPR035996 Tetrapyrrole methylase superfamily D3H41_17950 IPR004668 Anaerobic c4-dicarboxylate membrane transporter D3H41_17965 IPR000531 TonB-dependent receptor-like, beta-barrel D3H41_17965 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D3H41_17965 IPR010917 TonB-dependent receptor, conserved site D3H41_17965 IPR010105 TonB-dependent siderophore receptor D3H41_17965 IPR037066 TonB-dependent receptor, plug domain superfamily D3H41_17965 IPR010916 TonB box, conserved site D3H41_17965 IPR012910 TonB-dependent receptor, plug domain D3H41_17965 IPR039426 Vitamin B12 transporter BtuB-like D3H41_17975 IPR016181 Acyl-CoA N-acyltransferase D3H41_17975 IPR000182 GNAT domain D3H41_17980 IPR020483 Uncharacterised protein family YgbA D3H41_17985 IPR011701 Major facilitator superfamily D3H41_17985 IPR020846 Major facilitator superfamily domain D3H41_17985 IPR036259 MFS transporter superfamily D3H41_17985 IPR023745 MSF-type transporter, YcaD D3H41_17990 IPR005746 Thioredoxin D3H41_17990 IPR036249 Thioredoxin-like superfamily D3H41_17990 IPR017937 Thioredoxin, conserved site D3H41_17990 IPR013766 Thioredoxin domain D3H41_17995 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 D3H41_17995 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal D3H41_17995 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D3H41_17995 IPR016039 Thiolase-like D3H41_18015 IPR016305 Mannose-6-phosphate isomerase D3H41_18015 IPR018050 Phosphomannose isomerase, type I, conserved site D3H41_18015 IPR014710 RmlC-like jelly roll fold D3H41_18015 IPR011051 RmlC-like cupin domain superfamily D3H41_18015 IPR001250 Mannose-6-phosphate isomerase, type I D3H41_18020 IPR011701 Major facilitator superfamily D3H41_18020 IPR020846 Major facilitator superfamily domain D3H41_18020 IPR000849 Sugar phosphate transporter D3H41_18020 IPR021159 Glycerate/sugar phosphate transporter, conserved site D3H41_18020 IPR036259 MFS transporter superfamily D3H41_18025 IPR005467 Histidine kinase domain D3H41_18025 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3H41_18025 IPR003594 Histidine kinase/HSP90-like ATPase D3H41_18025 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain D3H41_18025 IPR007895 MASE1 D3H41_18030 IPR001789 Signal transduction response regulator, receiver domain D3H41_18030 IPR016032 Signal transduction response regulator, C-terminal effector D3H41_18030 IPR011006 CheY-like superfamily D3H41_18030 IPR000792 Transcription regulator LuxR, C-terminal D3H41_18035 IPR000849 Sugar phosphate transporter D3H41_18035 IPR011701 Major facilitator superfamily D3H41_18035 IPR036259 MFS transporter superfamily D3H41_18035 IPR021159 Glycerate/sugar phosphate transporter, conserved site D3H41_18035 IPR020846 Major facilitator superfamily domain D3H41_18040 IPR016193 Cytidine deaminase-like D3H41_18040 IPR003786 Sulfur carrier protein FdhD D3H41_18045 IPR036390 Winged helix DNA-binding domain superfamily D3H41_18045 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_18045 IPR000847 Transcription regulator HTH, LysR D3H41_18045 IPR005119 LysR, substrate-binding D3H41_18055 IPR010046 Oxidoreductase alpha (molybdopterin) subunit D3H41_18055 IPR009010 Aspartate decarboxylase-like domain superfamily D3H41_18055 IPR006656 Molybdopterin oxidoreductase D3H41_18055 IPR041953 YdeP, molybdopterin-binding oxidoreductase-like domain D3H41_18055 IPR037951 YdeP-like, MopB domain D3H41_18070 IPR003719 Phenazine biosynthesis PhzF protein D3H41_18075 IPR001920 Asp/Glu racemase D3H41_18075 IPR004380 Aspartate racemase D3H41_18075 IPR033134 Asp/Glu racemase, active site 2 D3H41_18075 IPR018187 Asp/Glu racemase, active site 1 D3H41_18075 IPR015942 Asp/Glu/hydantoin racemase D3H41_18080 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily D3H41_18080 IPR023753 FAD/NAD(P)-binding domain D3H41_18080 IPR017758 Coenzyme A disulphide reductase D3H41_18080 IPR023536 Coenzyme A disulphide reductase, staphyolococci D3H41_18080 IPR036188 FAD/NAD(P)-binding domain superfamily D3H41_18080 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D3H41_18090 IPR007272 Sulphur transport domain D3H41_18110 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic D3H41_18110 IPR005144 ATP-cone domain D3H41_18110 IPR019777 Formate C-acetyltransferase glycine radical, conserved site D3H41_18110 IPR001150 Glycine radical domain D3H41_18115 IPR001989 Radical-activating enzyme, conserved site D3H41_18115 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic D3H41_18115 IPR013785 Aldolase-type TIM barrel D3H41_18115 IPR007197 Radical SAM D3H41_18115 IPR034457 Organic radical-activating enzymes D3H41_18120 IPR002528 Multi antimicrobial extrusion protein D3H41_18125 IPR020449 Transcription regulator HTH, AraC- type D3H41_18125 IPR011051 RmlC-like cupin domain superfamily D3H41_18125 IPR018060 DNA binding HTH domain, AraC-type D3H41_18125 IPR009057 Homeobox-like domain superfamily D3H41_18125 IPR032783 AraC-type transcription regulator, ligand-binding domain D3H41_18130 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 D3H41_18130 IPR004839 Aminotransferase, class I/classII D3H41_18130 IPR000796 Aspartate/other aminotransferase D3H41_18130 IPR015424 Pyridoxal phosphate-dependent transferase D3H41_18130 IPR015421 Pyridoxal phosphate-dependent transferase, major domain D3H41_18135 IPR013815 ATP-grasp fold, subdomain 1 D3H41_18135 IPR041107 RimK, PreATP-grasp domain D3H41_18135 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX D3H41_18135 IPR011761 ATP-grasp fold D3H41_18135 IPR013651 ATP-grasp fold, RimK-type D3H41_18135 IPR021109 Aspartic peptidase domain superfamily D3H41_18135 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK D3H41_18145 IPR036700 Bacterial OB-fold superfamily D3H41_18145 IPR005220 Bacterial OB-fold D3H41_18145 IPR016052 Bacteriophage 933W, L0136 D3H41_18150 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_18150 IPR017929 CobB/CobQ glutamine amidotransferase D3H41_18150 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain D3H41_18150 IPR029062 Class I glutamine amidotransferase-like D3H41_18150 IPR033949 Cobyric acid synthase, glutamine amidotransferase type 1 D3H41_18150 IPR004459 Cobyric acid synthase CobQ D3H41_18150 IPR011698 CobB/CobQ-like glutamine amidotransferase D3H41_18155 IPR005950 Molybdate ABC transporter, substrate-binding protein D3H41_18160 IPR035906 MetI-like superfamily D3H41_18160 IPR000515 ABC transporter type 1, transmembrane domain MetI-like D3H41_18160 IPR011867 Molybdate ABC transporter, permease protein D3H41_18165 IPR004606 Molybdenum-pterin binding D3H41_18165 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_18165 IPR005116 Transport-associated OB, type 1 D3H41_18165 IPR015852 ABC transporter, molybdenum import, ModC D3H41_18165 IPR017871 ABC transporter, conserved site D3H41_18165 IPR003439 ABC transporter-like D3H41_18165 IPR003593 AAA+ ATPase domain D3H41_18165 IPR011868 Molybdate ABC transporter, ATP-binding protein D3H41_18165 IPR008995 Molybdate/tungstate binding, C-terminal D3H41_18175 IPR029787 Nucleotide cyclase D3H41_18175 IPR000160 GGDEF domain D3H41_18175 IPR029016 GAF-like domain superfamily D3H41_18175 IPR003018 GAF domain D3H41_18175 IPR035919 EAL domain superfamily D3H41_18175 IPR001633 EAL domain D3H41_18175 IPR016132 Phytochrome chromophore attachment domain D3H41_18175 IPR013515 Phytochrome, central region D3H41_18175 IPR001294 Phytochrome D3H41_18180 IPR000160 GGDEF domain D3H41_18180 IPR029787 Nucleotide cyclase D3H41_18180 IPR011006 CheY-like superfamily D3H41_18180 IPR001789 Signal transduction response regulator, receiver domain D3H41_18195 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 D3H41_18195 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal D3H41_18195 IPR026255 NAD(P) transhydrogenase, alpha subunit D3H41_18195 IPR036291 NAD(P)-binding domain superfamily D3H41_18195 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain D3H41_18195 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal D3H41_18195 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 D3H41_18200 IPR029035 DHS-like NAD/FAD-binding domain superfamily D3H41_18200 IPR012136 NADP transhydrogenase, beta subunit D3H41_18200 IPR034300 NADP transhydrogenase beta-like domain D3H41_18210 IPR001789 Signal transduction response regulator, receiver domain D3H41_18210 IPR039420 Transcriptional regulatory protein WalR-like D3H41_18210 IPR011006 CheY-like superfamily D3H41_18210 IPR001867 OmpR/PhoB-type DNA-binding domain D3H41_18210 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_18225 IPR005371 Uncharacterised protein family UPF0181 D3H41_18240 IPR000847 Transcription regulator HTH, LysR D3H41_18240 IPR036390 Winged helix DNA-binding domain superfamily D3H41_18240 IPR005119 LysR, substrate-binding D3H41_18240 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_18280 IPR008900 Zona occludens toxin, N-terminal D3H41_18330 IPR036877 SUI1 domain superfamily D3H41_18330 IPR001950 SUI1 domain D3H41_18330 IPR005872 Archaeal/bacterial translation initiation factor SUI1 D3H41_18340 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site D3H41_18340 IPR013815 ATP-grasp fold, subdomain 1 D3H41_18340 IPR011127 D-alanine--D-alanine ligase, N-terminal domain D3H41_18340 IPR011095 D-alanine--D-alanine ligase, C-terminal D3H41_18340 IPR011761 ATP-grasp fold D3H41_18340 IPR016185 Pre-ATP-grasp domain superfamily D3H41_18340 IPR005905 D-alanine--D-alanine ligase D3H41_18345 IPR007730 Sporulation-like domain D3H41_18345 IPR036680 Sporulation-like domain superfamily D3H41_18350 IPR016102 Succinyl-CoA synthetase-like D3H41_18350 IPR016181 Acyl-CoA N-acyltransferase D3H41_18350 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain D3H41_18350 IPR011761 ATP-grasp fold D3H41_18350 IPR013815 ATP-grasp fold, subdomain 1 D3H41_18350 IPR003781 CoA-binding D3H41_18350 IPR000182 GNAT domain D3H41_18350 IPR036291 NAD(P)-binding domain superfamily D3H41_18355 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_18355 IPR005119 LysR, substrate-binding D3H41_18355 IPR036390 Winged helix DNA-binding domain superfamily D3H41_18355 IPR000847 Transcription regulator HTH, LysR D3H41_18360 IPR039426 Vitamin B12 transporter BtuB-like D3H41_18360 IPR012910 TonB-dependent receptor, plug domain D3H41_18360 IPR037066 TonB-dependent receptor, plug domain superfamily D3H41_18360 IPR006970 PT repeat D3H41_18360 IPR000531 TonB-dependent receptor-like, beta-barrel D3H41_18360 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor D3H41_18360 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D3H41_18360 IPR010917 TonB-dependent receptor, conserved site D3H41_18370 IPR016040 NAD(P)-binding domain D3H41_18370 IPR005886 UDP-glucose 4-epimerase D3H41_18370 IPR036291 NAD(P)-binding domain superfamily D3H41_18375 IPR029787 Nucleotide cyclase D3H41_18375 IPR035919 EAL domain superfamily D3H41_18375 IPR001633 EAL domain D3H41_18375 IPR007895 MASE1 D3H41_18375 IPR000160 GGDEF domain D3H41_18375 IPR000014 PAS domain D3H41_18375 IPR013655 PAS fold-3 D3H41_18375 IPR013656 PAS fold-4 D3H41_18375 IPR035965 PAS domain superfamily D3H41_18375 IPR000700 PAS-associated, C-terminal D3H41_18375 IPR001610 PAC motif D3H41_18380 IPR005501 LamB/YcsF/PxpA-like D3H41_18380 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel D3H41_18385 IPR010016 KipI family D3H41_18385 IPR029000 Cyclophilin-like domain superfamily D3H41_18385 IPR003833 Carboxyltransferase domain, subdomain C and D D3H41_18390 IPR003778 Carboxyltransferase domain, subdomain A and B D3H41_18390 IPR029000 Cyclophilin-like domain superfamily D3H41_18400 IPR038766 Membrane component of ABC transporter, predicted D3H41_18405 IPR003439 ABC transporter-like D3H41_18405 IPR017871 ABC transporter, conserved site D3H41_18405 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_18405 IPR003593 AAA+ ATPase domain D3H41_18410 IPR036514 SGNH hydrolase superfamily D3H41_18410 IPR013830 SGNH hydrolase-type esterase domain D3H41_18410 IPR008265 Lipase, GDSL, active site D3H41_18415 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative D3H41_18415 IPR036291 NAD(P)-binding domain superfamily D3H41_18415 IPR010758 Trans-2-enoyl-CoA reductase D3H41_18415 IPR024906 Enoyl reductase FAD binding domain D3H41_18420 IPR001633 EAL domain D3H41_18420 IPR035919 EAL domain superfamily D3H41_18420 IPR000160 GGDEF domain D3H41_18420 IPR005330 MHYT domain D3H41_18420 IPR029787 Nucleotide cyclase D3H41_18420 IPR000014 PAS domain D3H41_18420 IPR035965 PAS domain superfamily D3H41_18430 IPR018253 DnaJ domain, conserved site D3H41_18430 IPR012724 Chaperone DnaJ D3H41_18430 IPR008971 HSP40/DnaJ peptide-binding D3H41_18430 IPR001305 Heat shock protein DnaJ, cysteine-rich domain D3H41_18430 IPR001623 DnaJ domain D3H41_18430 IPR002939 Chaperone DnaJ, C-terminal D3H41_18430 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily D3H41_18430 IPR036869 Chaperone J-domain superfamily D3H41_18455 IPR023767 Transcriptional regulator SgrR D3H41_18455 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain D3H41_18455 IPR000914 Solute-binding protein family 5 domain D3H41_18455 IPR039424 Solute-binding protein family 5 D3H41_18465 IPR029069 HotDog domain superfamily D3H41_18465 IPR003736 Phenylacetic acid degradation-related domain D3H41_18465 IPR006683 Thioesterase domain D3H41_18480 IPR042117 OMPP1/FadL/TodX superfamily D3H41_18480 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) D3H41_18485 IPR020009 Extracellular lipase, Pla-1/cef family D3H41_18485 IPR025920 Bacterial virulence factor lipase, N-terminal domain D3H41_18485 IPR029058 Alpha/Beta hydrolase fold D3H41_18505 IPR022369 Integral membrane protein TerC, riboswitch-linked D3H41_18505 IPR005496 Integral membrane protein TerC D3H41_18510 IPR036907 5'-Nucleotidase, C-terminal domain superfamily D3H41_18510 IPR006146 5'-Nucleotidase, conserved site D3H41_18510 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type D3H41_18510 IPR008334 5'-Nucleotidase, C-terminal D3H41_18510 IPR006179 5'-Nucleotidase/apyrase D3H41_18510 IPR006420 NAD pyrophosphatase/5-nucleotidase NadN D3H41_18510 IPR029052 Metallo-dependent phosphatase-like D3H41_18515 IPR034139 OLD protein-like, TOPRIM domain D3H41_18515 IPR006171 TOPRIM domain D3H41_18515 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_18515 IPR022602 Protein of unknown function DUF2813 D3H41_18520 IPR009476 Protein of unknown function DUF1097 D3H41_18525 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_18525 IPR005119 LysR, substrate-binding D3H41_18525 IPR000847 Transcription regulator HTH, LysR D3H41_18525 IPR036390 Winged helix DNA-binding domain superfamily D3H41_18530 IPR000292 Formate/nitrite transporter D3H41_18530 IPR024002 Formate/nitrite transporter, conserved site D3H41_18530 IPR023271 Aquaporin-like D3H41_18530 IPR023999 Formate transporter FocA, putative D3H41_18535 IPR023480 Uncharacterised protein family UPF0312/YceI D3H41_18535 IPR007372 Lipid/polyisoprenoid-binding, YceI-like D3H41_18535 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily D3H41_18540 IPR016174 Di-haem cytochrome, transmembrane D3H41_18540 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase D3H41_18560 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site D3H41_18560 IPR028622 ATP-dependent RNA helicase RhlE D3H41_18560 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_18560 IPR001650 Helicase, C-terminal D3H41_18560 IPR014014 RNA helicase, DEAD-box type, Q motif D3H41_18560 IPR014001 Helicase superfamily 1/2, ATP-binding domain D3H41_18560 IPR011545 DEAD/DEAH box helicase domain D3H41_18565 IPR023491 Acyl carrier protein phosphodiesterase, gammaproteobacteria D3H41_18565 IPR007431 Acyl carrier protein phosphodiesterase D3H41_18575 IPR000727 Target SNARE coiled-coil homology domain D3H41_18575 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain D3H41_18575 IPR003660 HAMP domain D3H41_18575 IPR004090 Chemotaxis methyl-accepting receptor D3H41_18575 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain D3H41_18585 IPR041492 Haloacid dehalogenase-like hydrolase D3H41_18585 IPR036412 HAD-like superfamily D3H41_18585 IPR023733 Pyrophosphatase PpaX D3H41_18585 IPR023214 HAD superfamily D3H41_18585 IPR006439 HAD hydrolase, subfamily IA D3H41_18585 IPR023198 Phosphoglycolate phosphatase-like, domain 2 D3H41_18600 IPR029056 Ribokinase-like D3H41_18600 IPR011611 Carbohydrate kinase PfkB D3H41_18600 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site D3H41_18605 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site D3H41_18605 IPR000559 Formate-tetrahydrofolate ligase, FTHFS D3H41_18605 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_18610 IPR005835 Nucleotidyl transferase domain D3H41_18610 IPR011831 Glucose-1-phosphate adenylyltransferase D3H41_18610 IPR005836 ADP-glucose pyrophosphorylase, conserved site D3H41_18610 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial D3H41_18610 IPR011004 Trimeric LpxA-like superfamily D3H41_18610 IPR029044 Nucleotide-diphospho-sugar transferases D3H41_18615 IPR009470 Chitinase, C-terminal D3H41_18615 IPR013783 Immunoglobulin-like fold D3H41_18615 IPR017853 Glycoside hydrolase superfamily D3H41_18615 IPR001223 Glycoside hydrolase family 18, catalytic domain D3H41_18615 IPR029070 Chitinase insertion domain superfamily D3H41_18615 IPR011583 Chitinase II D3H41_18615 IPR003610 Carbohydrate-binding module family 5/12 D3H41_18615 IPR036573 Carbohydrate-binding module superfamily 5/12 D3H41_18625 IPR009594 Transcription regulator HTH, AraC, N-terminal D3H41_18625 IPR018060 DNA binding HTH domain, AraC-type D3H41_18625 IPR009057 Homeobox-like domain superfamily D3H41_18630 IPR018211 Alcohol dehydrogenase, iron-type, conserved site D3H41_18630 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA D3H41_18640 IPR003593 AAA+ ATPase domain D3H41_18640 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_18640 IPR017871 ABC transporter, conserved site D3H41_18640 IPR003439 ABC transporter-like D3H41_18640 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type D3H41_18645 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain D3H41_18645 IPR000515 ABC transporter type 1, transmembrane domain MetI-like D3H41_18645 IPR035906 MetI-like superfamily D3H41_18650 IPR018313 Solute-binding protein family 3, conserved site D3H41_18650 IPR001320 Ionotropic glutamate receptor D3H41_18650 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter D3H41_18650 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF D3H41_18655 IPR035906 MetI-like superfamily D3H41_18655 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain D3H41_18655 IPR000515 ABC transporter type 1, transmembrane domain MetI-like D3H41_18660 IPR013767 PAS fold D3H41_18660 IPR001633 EAL domain D3H41_18660 IPR029016 GAF-like domain superfamily D3H41_18660 IPR000160 GGDEF domain D3H41_18660 IPR003018 GAF domain D3H41_18660 IPR001610 PAC motif D3H41_18660 IPR000014 PAS domain D3H41_18660 IPR000700 PAS-associated, C-terminal D3H41_18660 IPR035965 PAS domain superfamily D3H41_18660 IPR029787 Nucleotide cyclase D3H41_18660 IPR035919 EAL domain superfamily D3H41_18675 IPR012781 D-fructose-responsive transcription factor D3H41_18675 IPR000843 LacI-type HTH domain D3H41_18675 IPR001761 Periplasmic binding protein/LacI sugar binding domain D3H41_18675 IPR028082 Periplasmic binding protein-like I D3H41_18675 IPR010982 Lambda repressor-like, DNA-binding domain superfamily D3H41_18680 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site D3H41_18680 IPR002114 Phosphotransferase system, HPr serine phosphorylation site D3H41_18680 IPR016152 Phosphotransferase/anion transporter D3H41_18680 IPR000032 Phosphocarrier protein HPr-like D3H41_18680 IPR035895 HPr-like superfamily D3H41_18680 IPR002178 PTS EIIA type-2 domain D3H41_18685 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site D3H41_18685 IPR029056 Ribokinase-like D3H41_18685 IPR017583 Tagatose/fructose phosphokinase D3H41_18685 IPR011611 Carbohydrate kinase PfkB D3H41_18685 IPR022463 Fructose 1-phosphate kinase D3H41_18690 IPR036095 PTS system IIB component-like superfamily D3H41_18690 IPR003501 Phosphotransferase system, EIIB component, type 2/3 D3H41_18690 IPR013014 Phosphotransferase system, EIIC component, type 2 D3H41_18690 IPR003353 Phosphotransferase system, fructose-specific IIB subunit D3H41_18690 IPR006327 Phosphotransferase system, fructose IIC component D3H41_18690 IPR013011 Phosphotransferase system, EIIB component, type 2 D3H41_18690 IPR003352 Phosphotransferase system, EIIC D3H41_18700 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D3H41_18700 IPR001036 Acriflavin resistance protein D3H41_18720 IPR006223 Glycine cleavage system T protein D3H41_18720 IPR028896 Aminomethyltransferase-like D3H41_18720 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain D3H41_18720 IPR022903 Glycine cleavage system T protein, bacteria D3H41_18720 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal D3H41_18720 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 D3H41_18720 IPR006222 Aminomethyltransferase, folate-binding domain D3H41_18730 IPR039429 Serine hydroxymethyltransferase-like domain D3H41_18730 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site D3H41_18730 IPR001085 Serine hydroxymethyltransferase D3H41_18730 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 D3H41_18730 IPR015424 Pyridoxal phosphate-dependent transferase D3H41_18730 IPR015421 Pyridoxal phosphate-dependent transferase, major domain D3H41_18735 IPR011053 Single hybrid motif D3H41_18735 IPR017453 Glycine cleavage system H-protein, subgroup D3H41_18735 IPR033753 Glycine cleavage system H-protein/Simiate D3H41_18735 IPR002930 Glycine cleavage system H-protein D3H41_18735 IPR000089 Biotin/lipoyl attachment D3H41_18740 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 D3H41_18740 IPR003437 Glycine dehydrogenase (decarboxylating) D3H41_18740 IPR020581 Glycine cleavage system P protein D3H41_18740 IPR015421 Pyridoxal phosphate-dependent transferase, major domain D3H41_18740 IPR015424 Pyridoxal phosphate-dependent transferase D3H41_18745 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D3H41_18745 IPR037523 Vicinal oxygen chelate (VOC) domain D3H41_18745 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain D3H41_18755 IPR001279 Metallo-beta-lactamase D3H41_18755 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain D3H41_18755 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain D3H41_18755 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like D3H41_18755 IPR017782 Hydroxyacylglutathione hydrolase D3H41_18760 IPR005119 LysR, substrate-binding D3H41_18760 IPR000847 Transcription regulator HTH, LysR D3H41_18760 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_18760 IPR036390 Winged helix DNA-binding domain superfamily D3H41_18765 IPR000620 EamA domain D3H41_18770 IPR004675 Alkylhydroperoxidase AhpD core D3H41_18770 IPR029032 AhpD-like D3H41_18770 IPR003779 Carboxymuconolactone decarboxylase-like D3H41_18775 IPR017853 Glycoside hydrolase superfamily D3H41_18775 IPR037923 Transcription regulator HTH-like D3H41_18775 IPR018060 DNA binding HTH domain, AraC-type D3H41_18775 IPR020449 Transcription regulator HTH, AraC- type D3H41_18775 IPR009057 Homeobox-like domain superfamily D3H41_18825 IPR013520 Exonuclease, RNase T/DNA polymerase III D3H41_18825 IPR004013 PHP domain D3H41_18825 IPR036397 Ribonuclease H superfamily D3H41_18825 IPR012340 Nucleic acid-binding, OB-fold D3H41_18825 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain D3H41_18825 IPR024754 DNA polymerase III polC-like, N-terminal domain II D3H41_18825 IPR029460 DNA polymerase, helix-hairpin-helix motif D3H41_18825 IPR003141 Polymerase/histidinol phosphatase, N-terminal D3H41_18825 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type D3H41_18825 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain D3H41_18825 IPR012337 Ribonuclease H-like superfamily D3H41_18825 IPR040982 DNA polymerase III alpha subunit finger domain D3H41_18835 IPR011527 ABC transporter type 1, transmembrane domain D3H41_18835 IPR003439 ABC transporter-like D3H41_18835 IPR017871 ABC transporter, conserved site D3H41_18835 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_18835 IPR003593 AAA+ ATPase domain D3H41_18835 IPR036640 ABC transporter type 1, transmembrane domain superfamily D3H41_18855 IPR036541 Phospholipase A1 superfamily D3H41_18855 IPR003187 Phospholipase A1 D3H41_18865 IPR009061 Putative DNA-binding domain superfamily D3H41_18865 IPR000551 MerR-type HTH domain D3H41_18865 IPR015358 Transcription regulator MerR, DNA binding D3H41_18865 IPR011789 Cu(I)-responsive transcriptional regulator D3H41_18870 IPR036821 Peptide deformylase superfamily D3H41_18870 IPR023635 Peptide deformylase D3H41_18905 IPR006668 Magnesium transporter, MgtE intracellular domain D3H41_18905 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily D3H41_18905 IPR000644 CBS domain D3H41_18905 IPR006667 SLC41 divalent cation transporters, integral membrane domain D3H41_18905 IPR006669 Magnesium transporter MgtE D3H41_18905 IPR038076 MgtE, N-terminal domain superfamily D3H41_18905 IPR038048 Magnesium transporter MgtE, transmembrane domain D3H41_18925 IPR018146 Glyoxalase I, conserved site D3H41_18925 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D3H41_18925 IPR037523 Vicinal oxygen chelate (VOC) domain D3H41_18925 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain D3H41_18925 IPR004361 Glyoxalase I D3H41_18930 IPR013785 Aldolase-type TIM barrel D3H41_18930 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal D3H41_18940 IPR002656 Acyltransferase 3 D3H41_18940 IPR036514 SGNH hydrolase superfamily D3H41_18955 IPR002016 Haem peroxidase D3H41_18955 IPR000763 Catalase-peroxidase haem D3H41_18955 IPR019794 Peroxidase, active site D3H41_18955 IPR010255 Haem peroxidase superfamily D3H41_18960 IPR013785 Aldolase-type TIM barrel D3H41_18960 IPR002932 Glutamate synthase domain D3H41_18960 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site D3H41_18960 IPR024188 Glutamate synthase large subunit-like protein D3H41_18960 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain D3H41_18970 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent D3H41_18970 IPR029510 Aldehyde dehydrogenase, glutamic acid active site D3H41_18970 IPR016162 Aldehyde dehydrogenase, N-terminal D3H41_18970 IPR015590 Aldehyde dehydrogenase domain D3H41_18970 IPR016163 Aldehyde dehydrogenase, C-terminal D3H41_18970 IPR016161 Aldehyde/histidinol dehydrogenase D3H41_18985 IPR000620 EamA domain D3H41_18990 IPR000390 Small multidrug resistance protein family D3H41_19010 IPR000620 EamA domain D3H41_19010 IPR004626 RarD protein D3H41_19020 IPR013545 Type II secretion system protein G D3H41_19020 IPR012902 Prokaryotic N-terminal methylation site D3H41_19020 IPR000983 Bacterial general secretion pathway protein G-type pilin D3H41_19020 IPR010054 General secretion pathway protein G D3H41_19025 IPR024181 Chemotaxis response regulator CheV D3H41_19025 IPR036061 CheW-like domain superfamily D3H41_19025 IPR002545 CheW-like domain D3H41_19025 IPR011006 CheY-like superfamily D3H41_19025 IPR001789 Signal transduction response regulator, receiver domain D3H41_19035 IPR011006 CheY-like superfamily D3H41_19035 IPR001789 Signal transduction response regulator, receiver domain D3H41_19035 IPR000792 Transcription regulator LuxR, C-terminal D3H41_19045 IPR029787 Nucleotide cyclase D3H41_19045 IPR039435 Diguanylate cyclase DosC, globin sensor domain D3H41_19045 IPR000160 GGDEF domain D3H41_19045 IPR012292 Globin/Protoglobin D3H41_19045 IPR009050 Globin-like superfamily D3H41_19050 IPR000792 Transcription regulator LuxR, C-terminal D3H41_19050 IPR011006 CheY-like superfamily D3H41_19050 IPR016032 Signal transduction response regulator, C-terminal effector D3H41_19050 IPR001789 Signal transduction response regulator, receiver domain D3H41_19055 IPR035965 PAS domain superfamily D3H41_19055 IPR001633 EAL domain D3H41_19055 IPR035919 EAL domain superfamily D3H41_19055 IPR000160 GGDEF domain D3H41_19055 IPR005330 MHYT domain D3H41_19055 IPR029787 Nucleotide cyclase D3H41_19055 IPR000014 PAS domain D3H41_19060 IPR038388 RcsC, C-terminal domain superfamily D3H41_19060 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal D3H41_19060 IPR004358 Signal transduction histidine kinase-related protein, C-terminal D3H41_19060 IPR011006 CheY-like superfamily D3H41_19060 IPR003594 Histidine kinase/HSP90-like ATPase D3H41_19060 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3H41_19060 IPR005467 Histidine kinase domain D3H41_19060 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain D3H41_19060 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily D3H41_19060 IPR001789 Signal transduction response regulator, receiver domain D3H41_19060 IPR030856 Sensor histidine kinase RcsC D3H41_19065 IPR019991 GTP-binding protein, ribosome biogenesis D3H41_19065 IPR016478 GTPase, MTG1 D3H41_19065 IPR006073 GTP binding domain D3H41_19065 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_19065 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily D3H41_19065 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain D3H41_19070 IPR004839 Aminotransferase, class I/classII D3H41_19070 IPR015424 Pyridoxal phosphate-dependent transferase D3H41_19070 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 D3H41_19070 IPR015421 Pyridoxal phosphate-dependent transferase, major domain D3H41_19075 IPR001789 Signal transduction response regulator, receiver domain D3H41_19075 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain D3H41_19075 IPR005467 Histidine kinase domain D3H41_19075 IPR004358 Signal transduction histidine kinase-related protein, C-terminal D3H41_19075 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily D3H41_19075 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3H41_19075 IPR003594 Histidine kinase/HSP90-like ATPase D3H41_19075 IPR011006 CheY-like superfamily D3H41_19085 IPR006464 N-acetyltransferase RimI/Ard1 D3H41_19085 IPR000905 Gcp-like domain D3H41_19085 IPR000182 GNAT domain D3H41_19085 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB D3H41_19085 IPR016181 Acyl-CoA N-acyltransferase D3H41_19095 IPR018385 C4-dicarboxylate anaerobic carrier-like D3H41_19095 IPR004669 C4-dicarboxylate anaerobic carrier D3H41_19110 IPR040603 Fanconi-associated nuclease 1, SAP domain D3H41_19110 IPR014883 VRR-NUC domain D3H41_19110 IPR011856 tRNA endonuclease-like domain superfamily D3H41_19110 IPR033315 Fanconi-associated nuclease 1-like D3H41_19120 IPR016052 Bacteriophage 933W, L0136 D3H41_19120 IPR036700 Bacterial OB-fold superfamily D3H41_19120 IPR005220 Bacterial OB-fold D3H41_19125 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal D3H41_19125 IPR005218 Diacylglycerol/lipid kinase D3H41_19125 IPR001206 Diacylglycerol kinase, catalytic domain D3H41_19125 IPR022433 Lipid kinase YegS D3H41_19125 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily D3H41_19130 IPR036390 Winged helix DNA-binding domain superfamily D3H41_19130 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_19130 IPR000847 Transcription regulator HTH, LysR D3H41_19130 IPR005119 LysR, substrate-binding D3H41_19135 IPR016192 APOBEC/CMP deaminase, zinc-binding D3H41_19135 IPR002125 Cytidine and deoxycytidylate deaminase domain D3H41_19135 IPR016193 Cytidine deaminase-like D3H41_19135 IPR024072 Dihydrofolate reductase-like domain superfamily D3H41_19135 IPR011549 Riboflavin-specific deaminase, C-terminal D3H41_19135 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal D3H41_19135 IPR004794 Riboflavin biosynthesis protein RibD D3H41_19150 IPR036465 von Willebrand factor A-like domain superfamily D3H41_19150 IPR002035 von Willebrand factor, type A D3H41_19150 IPR033881 von Willebrand factor domain BatA-type D3H41_19165 IPR011703 ATPase, AAA-3 D3H41_19165 IPR041628 ChlI/MoxR, AAA lid domain D3H41_19165 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_19170 IPR023885 4Fe4S-binding SPASM domain D3H41_19170 IPR013785 Aldolase-type TIM barrel D3H41_19170 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme D3H41_19170 IPR007197 Radical SAM D3H41_19175 IPR000917 Sulfatase, N-terminal D3H41_19175 IPR024607 Sulfatase, conserved site D3H41_19175 IPR032158 Domain of unknown function DUF4994 D3H41_19175 IPR017850 Alkaline-phosphatase-like, core domain superfamily D3H41_19180 IPR000847 Transcription regulator HTH, LysR D3H41_19180 IPR005119 LysR, substrate-binding D3H41_19180 IPR036390 Winged helix DNA-binding domain superfamily D3H41_19180 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_19185 IPR017850 Alkaline-phosphatase-like, core domain superfamily D3H41_19185 IPR024607 Sulfatase, conserved site D3H41_19185 IPR000917 Sulfatase, N-terminal D3H41_19190 IPR001867 OmpR/PhoB-type DNA-binding domain D3H41_19190 IPR001789 Signal transduction response regulator, receiver domain D3H41_19190 IPR039420 Transcriptional regulatory protein WalR-like D3H41_19190 IPR011006 CheY-like superfamily D3H41_19190 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_19205 IPR001789 Signal transduction response regulator, receiver domain D3H41_19205 IPR005467 Histidine kinase domain D3H41_19205 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain D3H41_19205 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily D3H41_19205 IPR038188 TorS, sensor domain superfamily D3H41_19205 IPR003660 HAMP domain D3H41_19205 IPR011006 CheY-like superfamily D3H41_19205 IPR003594 Histidine kinase/HSP90-like ATPase D3H41_19205 IPR036641 HPT domain superfamily D3H41_19205 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3H41_19205 IPR037952 Sensor histidine kinase TorS, sensor domain D3H41_19205 IPR004358 Signal transduction histidine kinase-related protein, C-terminal D3H41_19205 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain D3H41_19210 IPR014301 TMAO reductase system, periplasmic protein TorT D3H41_19210 IPR028082 Periplasmic binding protein-like I D3H41_19210 IPR001761 Periplasmic binding protein/LacI sugar binding domain D3H41_19215 IPR036914 Methylglyoxal synthase-like domain superfamily D3H41_19215 IPR018148 Methylglyoxal synthase, active site D3H41_19215 IPR011607 Methylglyoxal synthase-like domain D3H41_19215 IPR004363 Methylglyoxal synthase D3H41_19220 IPR034739 UvrD/AddA helicase, N-terminal D3H41_19220 IPR022161 DNA helicase IV, N-terminal domain D3H41_19220 IPR014017 UvrD-like DNA helicase, C-terminal D3H41_19220 IPR014016 UvrD-like helicase, ATP-binding domain D3H41_19220 IPR000212 DNA helicase, UvrD/REP type D3H41_19220 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_19225 IPR010019 Integral membrane protein, YccS D3H41_19225 IPR010020 Integral membrane protein, YccS/YhfK D3H41_19225 IPR032692 Integral membrane protein YccS, N-terminal D3H41_19260 IPR000531 TonB-dependent receptor-like, beta-barrel D3H41_19260 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor D3H41_19260 IPR037066 TonB-dependent receptor, plug domain superfamily D3H41_19260 IPR012910 TonB-dependent receptor, plug domain D3H41_19260 IPR039426 Vitamin B12 transporter BtuB-like D3H41_19260 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D3H41_19270 IPR009061 Putative DNA-binding domain superfamily D3H41_19270 IPR011789 Cu(I)-responsive transcriptional regulator D3H41_19270 IPR000551 MerR-type HTH domain D3H41_19275 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_19275 IPR017871 ABC transporter, conserved site D3H41_19275 IPR003593 AAA+ ATPase domain D3H41_19275 IPR003439 ABC transporter-like D3H41_19280 IPR000522 ABC transporter, permease protein, BtuC-like D3H41_19280 IPR037294 ABC transporter, BtuC-like D3H41_19285 IPR037294 ABC transporter, BtuC-like D3H41_19285 IPR000522 ABC transporter, permease protein, BtuC-like D3H41_19290 IPR033870 FatB domain D3H41_19290 IPR002491 ABC transporter periplasmic binding domain D3H41_19300 IPR035994 Nucleoside phosphorylase superfamily D3H41_19300 IPR000845 Nucleoside phosphorylase domain D3H41_19300 IPR018016 Nucleoside phosphorylase, conserved site D3H41_19300 IPR010058 Uridine phosphorylase D3H41_19305 IPR006419 Nicotinamide mononucleotide transporter PnuC D3H41_19315 IPR028082 Periplasmic binding protein-like I D3H41_19315 IPR010982 Lambda repressor-like, DNA-binding domain superfamily D3H41_19315 IPR000843 LacI-type HTH domain D3H41_19320 IPR002139 Ribokinase/fructokinase D3H41_19320 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site D3H41_19320 IPR011877 Ribokinase D3H41_19320 IPR011611 Carbohydrate kinase PfkB D3H41_19320 IPR029056 Ribokinase-like D3H41_19325 IPR028082 Periplasmic binding protein-like I D3H41_19325 IPR025997 Periplasmic binding protein D3H41_19330 IPR001851 ABC transporter, permease D3H41_19335 IPR003439 ABC transporter-like D3H41_19335 IPR015861 ABC transporter, ribose import, RbsA D3H41_19335 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_19335 IPR017871 ABC transporter, conserved site D3H41_19335 IPR003593 AAA+ ATPase domain D3H41_19340 IPR023750 RbsD-like superfamily D3H41_19340 IPR023064 D-ribose pyranase D3H41_19340 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU D3H41_19345 IPR001633 EAL domain D3H41_19345 IPR035919 EAL domain superfamily D3H41_19345 IPR003660 HAMP domain D3H41_19345 IPR029787 Nucleotide cyclase D3H41_19345 IPR000160 GGDEF domain D3H41_19395 IPR006694 Fatty acid hydroxylase D3H41_19405 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal D3H41_19405 IPR033524 Leu/Phe/Val dehydrogenases active site D3H41_19405 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase D3H41_19405 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain D3H41_19405 IPR036291 NAD(P)-binding domain superfamily D3H41_19405 IPR033922 NAD(P) binding domain of glutamate dehydrogenase D3H41_19405 IPR014362 Glutamate dehydrogenase D3H41_19415 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily D3H41_19415 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain D3H41_19415 IPR005467 Histidine kinase domain D3H41_19415 IPR029151 Periplasmic sensor-like domain superfamily D3H41_19415 IPR003594 Histidine kinase/HSP90-like ATPase D3H41_19415 IPR011006 CheY-like superfamily D3H41_19415 IPR004358 Signal transduction histidine kinase-related protein, C-terminal D3H41_19415 IPR001789 Signal transduction response regulator, receiver domain D3H41_19415 IPR035965 PAS domain superfamily D3H41_19415 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3H41_19415 IPR015387 LuxQ, periplasmic D3H41_19420 IPR009056 Cytochrome c-like domain D3H41_19420 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase D3H41_19420 IPR004852 Di-haem cytochrome c peroxidase D3H41_19420 IPR036909 Cytochrome c-like domain superfamily D3H41_19430 IPR001107 Band 7 domain D3H41_19430 IPR036013 Band 7/SPFH domain superfamily D3H41_19430 IPR001972 Stomatin family D3H41_19430 IPR032435 Band 7, C-terminal extension D3H41_19430 IPR018080 Band 7/stomatin-like, conserved site D3H41_19440 IPR029479 Nitroreductase D3H41_19440 IPR033878 Nitroreductase NfsB-like D3H41_19440 IPR000415 Nitroreductase-like D3H41_19445 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_19445 IPR003593 AAA+ ATPase domain D3H41_19445 IPR003439 ABC transporter-like D3H41_19445 IPR000644 CBS domain D3H41_19445 IPR017871 ABC transporter, conserved site D3H41_19445 IPR005892 Glycine betaine transport ATP-binding subunit D3H41_19450 IPR035906 MetI-like superfamily D3H41_19450 IPR000515 ABC transporter type 1, transmembrane domain MetI-like D3H41_19455 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain D3H41_19460 IPR027424 Glucose Oxidase, domain 2 D3H41_19460 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal D3H41_19460 IPR036188 FAD/NAD(P)-binding domain superfamily D3H41_19460 IPR011533 Oxygen-dependent choline dehydrogenase D3H41_19460 IPR012132 Glucose-methanol-choline oxidoreductase D3H41_19460 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal D3H41_19465 IPR029510 Aldehyde dehydrogenase, glutamic acid active site D3H41_19465 IPR016160 Aldehyde dehydrogenase, cysteine active site D3H41_19465 IPR011264 Betaine aldehyde dehydrogenase D3H41_19465 IPR016163 Aldehyde dehydrogenase, C-terminal D3H41_19465 IPR016161 Aldehyde/histidinol dehydrogenase D3H41_19465 IPR016162 Aldehyde dehydrogenase, N-terminal D3H41_19465 IPR015590 Aldehyde dehydrogenase domain D3H41_19470 IPR017757 Transcriptional repressor BetI D3H41_19470 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily D3H41_19470 IPR001647 DNA-binding HTH domain, TetR-type D3H41_19470 IPR009057 Homeobox-like domain superfamily D3H41_19470 IPR023772 DNA-binding HTH domain, TetR-type, conserved site D3H41_19470 IPR039538 BetI-type transcriptional repressor, C-terminal D3H41_19475 IPR001789 Signal transduction response regulator, receiver domain D3H41_19475 IPR029787 Nucleotide cyclase D3H41_19475 IPR011006 CheY-like superfamily D3H41_19475 IPR000160 GGDEF domain D3H41_19480 IPR002347 Short-chain dehydrogenase/reductase SDR D3H41_19480 IPR020904 Short-chain dehydrogenase/reductase, conserved site D3H41_19480 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase D3H41_19480 IPR036291 NAD(P)-binding domain superfamily D3H41_19485 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding D3H41_19485 IPR036291 NAD(P)-binding domain superfamily D3H41_19485 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site D3H41_19485 IPR015815 3-hydroxyisobutyrate dehydrogenase-related D3H41_19485 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily D3H41_19485 IPR013328 6-phosphogluconate dehydrogenase, domain 2 D3H41_19485 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain D3H41_19485 IPR011548 3-hydroxyisobutyrate dehydrogenase D3H41_19495 IPR014748 Enoyl-CoA hydratase, C-terminal D3H41_19495 IPR001753 Enoyl-CoA hydratase/isomerase D3H41_19495 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site D3H41_19495 IPR029045 ClpP/crotonase-like domain superfamily D3H41_19500 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain D3H41_19500 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily D3H41_19500 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal D3H41_19500 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal D3H41_19500 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal D3H41_19500 IPR006089 Acyl-CoA dehydrogenase, conserved site D3H41_19500 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily D3H41_19505 IPR016160 Aldehyde dehydrogenase, cysteine active site D3H41_19505 IPR016161 Aldehyde/histidinol dehydrogenase D3H41_19505 IPR016162 Aldehyde dehydrogenase, N-terminal D3H41_19505 IPR016163 Aldehyde dehydrogenase, C-terminal D3H41_19505 IPR015590 Aldehyde dehydrogenase domain D3H41_19505 IPR010061 Methylmalonate-semialdehyde dehydrogenase D3H41_19510 IPR020617 Thiolase, C-terminal D3H41_19510 IPR020610 Thiolase, active site D3H41_19510 IPR020615 Thiolase, acyl-enzyme intermediate active site D3H41_19510 IPR020613 Thiolase, conserved site D3H41_19510 IPR016039 Thiolase-like D3H41_19510 IPR002155 Thiolase D3H41_19510 IPR020616 Thiolase, N-terminal D3H41_19515 IPR009061 Putative DNA-binding domain superfamily D3H41_19515 IPR015358 Transcription regulator MerR, DNA binding D3H41_19515 IPR000551 MerR-type HTH domain D3H41_19515 IPR011789 Cu(I)-responsive transcriptional regulator D3H41_19520 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal D3H41_19520 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal D3H41_19520 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily D3H41_19520 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily D3H41_19520 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain D3H41_19520 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal D3H41_19520 IPR006089 Acyl-CoA dehydrogenase, conserved site D3H41_19525 IPR034733 Acetyl-CoA carboxylase D3H41_19525 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal D3H41_19525 IPR029045 ClpP/crotonase-like domain superfamily D3H41_19525 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal D3H41_19530 IPR014748 Enoyl-CoA hydratase, C-terminal D3H41_19530 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB D3H41_19530 IPR001753 Enoyl-CoA hydratase/isomerase D3H41_19530 IPR029045 ClpP/crotonase-like domain superfamily D3H41_19530 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site D3H41_19535 IPR011764 Biotin carboxylation domain D3H41_19535 IPR005482 Biotin carboxylase, C-terminal D3H41_19535 IPR000089 Biotin/lipoyl attachment D3H41_19535 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain D3H41_19535 IPR016185 Pre-ATP-grasp domain superfamily D3H41_19535 IPR011053 Single hybrid motif D3H41_19535 IPR001882 Biotin-binding site D3H41_19535 IPR011054 Rudiment single hybrid motif D3H41_19535 IPR011761 ATP-grasp fold D3H41_19535 IPR005481 Biotin carboxylase-like, N-terminal domain D3H41_19540 IPR000891 Pyruvate carboxyltransferase D3H41_19540 IPR013785 Aldolase-type TIM barrel D3H41_19540 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site D3H41_19550 IPR023408 Mechanosensitive ion channel MscS domain superfamily D3H41_19550 IPR024393 Mechanosensitive ion channel MscS, porin domain D3H41_19550 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 D3H41_19550 IPR006686 Mechanosensitive ion channel MscS, conserved site D3H41_19550 IPR010920 LSM domain superfamily D3H41_19550 IPR006685 Mechanosensitive ion channel MscS D3H41_19550 IPR025692 Mechanosensitive ion channel inner membrane domain 1 D3H41_19550 IPR011066 Mechanosensitive ion channel MscS, C-terminal D3H41_19560 IPR024688 Maltose/galactoside acetyltransferase D3H41_19560 IPR001451 Hexapeptide repeat D3H41_19560 IPR018357 Hexapeptide transferase, conserved site D3H41_19560 IPR011004 Trimeric LpxA-like superfamily D3H41_19565 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_19565 IPR004839 Aminotransferase, class I/classII D3H41_19565 IPR015424 Pyridoxal phosphate-dependent transferase D3H41_19565 IPR036390 Winged helix DNA-binding domain superfamily D3H41_19565 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 D3H41_19565 IPR000524 Transcription regulator HTH, GntR D3H41_19565 IPR015421 Pyridoxal phosphate-dependent transferase, major domain D3H41_19570 IPR002585 Cytochrome ubiquinol oxidase subunit 1 D3H41_19575 IPR003317 Cytochrome ubiquinol oxidase subunit 2 D3H41_19590 IPR023198 Phosphoglycolate phosphatase-like, domain 2 D3H41_19590 IPR023214 HAD superfamily D3H41_19590 IPR041492 Haloacid dehalogenase-like hydrolase D3H41_19590 IPR036412 HAD-like superfamily D3H41_19590 IPR006439 HAD hydrolase, subfamily IA D3H41_19595 IPR036390 Winged helix DNA-binding domain superfamily D3H41_19595 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_19595 IPR000847 Transcription regulator HTH, LysR D3H41_19595 IPR005119 LysR, substrate-binding D3H41_19595 IPR037410 HTH-type transcriptional regulator BudR, PBP2 domain D3H41_19600 IPR005128 Alpha-acetolactate decarboxylase D3H41_19605 IPR029035 DHS-like NAD/FAD-binding domain superfamily D3H41_19605 IPR029061 Thiamin diphosphate-binding fold D3H41_19605 IPR012000 Thiamine pyrophosphate enzyme, central domain D3H41_19605 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain D3H41_19605 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding D3H41_19605 IPR000399 TPP-binding enzyme, conserved site D3H41_19605 IPR012782 Acetolactate synthase, catabolic D3H41_19610 IPR036291 NAD(P)-binding domain superfamily D3H41_19610 IPR020904 Short-chain dehydrogenase/reductase, conserved site D3H41_19610 IPR002347 Short-chain dehydrogenase/reductase SDR D3H41_19615 IPR008854 TPMT family D3H41_19615 IPR025835 Thiopurine S-methyltransferase D3H41_19615 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3H41_19615 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification D3H41_19620 IPR000873 AMP-dependent synthetase/ligase D3H41_19620 IPR028154 AMP-dependent ligase, C-terminal D3H41_19620 IPR011880 Phenylacetate-CoA ligase D3H41_19620 IPR042099 AMP-dependent synthetase-like superfamily D3H41_19625 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein D3H41_19625 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_19625 IPR017871 ABC transporter, conserved site D3H41_19625 IPR003593 AAA+ ATPase domain D3H41_19625 IPR003439 ABC transporter-like D3H41_19645 IPR020845 AMP-binding, conserved site D3H41_19645 IPR000873 AMP-dependent synthetase/ligase D3H41_19645 IPR042099 AMP-dependent synthetase-like superfamily D3H41_19650 IPR003593 AAA+ ATPase domain D3H41_19650 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_19650 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal D3H41_19650 IPR017871 ABC transporter, conserved site D3H41_19650 IPR003439 ABC transporter-like D3H41_19660 IPR040156 Electron transfer flavoprotein-ubiquinone oxidoreductase D3H41_19660 IPR036188 FAD/NAD(P)-binding domain superfamily D3H41_19660 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain D3H41_19665 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal D3H41_19665 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site D3H41_19665 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3H41_19665 IPR012255 Electron transfer flavoprotein, beta subunit D3H41_19665 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal D3H41_19670 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal D3H41_19670 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3H41_19670 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site D3H41_19670 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal D3H41_19670 IPR001308 Electron transfer flavoprotein alpha subunit/FixB D3H41_19670 IPR029035 DHS-like NAD/FAD-binding domain superfamily D3H41_19670 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal D3H41_19675 IPR042099 AMP-dependent synthetase-like superfamily D3H41_19675 IPR000873 AMP-dependent synthetase/ligase D3H41_19675 IPR025110 AMP-binding enzyme, C-terminal domain D3H41_19675 IPR005914 Acetoacetyl-CoA synthase D3H41_19675 IPR020845 AMP-binding, conserved site D3H41_19680 IPR013013 Phosphotransferase system, EIIC component, type 1 D3H41_19680 IPR010975 Phosphotransferase system, alpha-glucoside-specific IIBC component D3H41_19680 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component D3H41_19680 IPR001996 Phosphotransferase system, IIB component, type 1 D3H41_19680 IPR036878 Glucose permease domain IIB D3H41_19680 IPR003352 Phosphotransferase system, EIIC D3H41_19680 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site D3H41_19685 IPR001088 Glycoside hydrolase, family 4 D3H41_19685 IPR022616 Glycosyl hydrolase, family 4, C-terminal D3H41_19685 IPR019802 Glycoside hydrolase, family 4, conserved site D3H41_19685 IPR036291 NAD(P)-binding domain superfamily D3H41_19685 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal D3H41_19690 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_19690 IPR036390 Winged helix DNA-binding domain superfamily D3H41_19690 IPR000524 Transcription regulator HTH, GntR D3H41_19690 IPR011663 UbiC transcription regulator-associated D3H41_19690 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily D3H41_19695 IPR005133 Na+/H+ antiporter subunit G D3H41_19700 IPR007208 Na(+)/H(+) antiporter subunit F-like D3H41_19715 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like D3H41_19720 IPR007182 Na+/H+ antiporter MnhB subunit-related protein D3H41_19720 IPR005663 Monovalent cation proton antiporter subunit A D3H41_19720 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit D3H41_19720 IPR025383 Domain of unknown function DUF4040 D3H41_19720 IPR005281 Monovalent cation:proton antiporter, subunit B D3H41_19720 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal D3H41_19730 IPR006016 UspA D3H41_19735 IPR002347 Short-chain dehydrogenase/reductase SDR D3H41_19735 IPR036291 NAD(P)-binding domain superfamily D3H41_19735 IPR020904 Short-chain dehydrogenase/reductase, conserved site D3H41_19740 IPR000847 Transcription regulator HTH, LysR D3H41_19740 IPR005119 LysR, substrate-binding D3H41_19740 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_19740 IPR036390 Winged helix DNA-binding domain superfamily D3H41_19750 IPR005829 Sugar transporter, conserved site D3H41_19750 IPR036259 MFS transporter superfamily D3H41_19750 IPR020846 Major facilitator superfamily domain D3H41_19750 IPR011701 Major facilitator superfamily D3H41_19750 IPR004812 Drug resistance transporter Bcr/CmlA subfamily D3H41_19805 IPR011991 ArsR-like helix-turn-helix domain D3H41_19805 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain D3H41_19805 IPR019885 Transcription regulator HTH, AsnC-type, conserved site D3H41_19805 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_19805 IPR036390 Winged helix DNA-binding domain superfamily D3H41_19805 IPR000485 AsnC-type HTH domain D3H41_19805 IPR011008 Dimeric alpha-beta barrel D3H41_19805 IPR019888 Transcription regulator AsnC-type D3H41_19840 IPR008271 Serine/threonine-protein kinase, active site D3H41_19840 IPR023507 Serine/threonine protein kinase PknD D3H41_19840 IPR011009 Protein kinase-like domain superfamily D3H41_19840 IPR011990 Tetratricopeptide-like helical domain superfamily D3H41_19840 IPR000719 Protein kinase domain D3H41_19840 IPR017441 Protein kinase, ATP binding site D3H41_19865 IPR006531 Gp5 N-terminal D3H41_19865 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset D3H41_19865 IPR037026 Vgr protein, OB-fold domain superfamily D3H41_19865 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein D3H41_19870 IPR036624 Hcp1-like superfamily D3H41_19870 IPR008514 Type VI secretion system effector, Hcp D3H41_19875 IPR041546 ClpA/ClpB, AAA lid domain D3H41_19875 IPR001270 ClpA/B family D3H41_19875 IPR017729 Type VI secretion system, ATPase ClpV1 D3H41_19875 IPR004176 Clp, N-terminal D3H41_19875 IPR036628 Clp, N-terminal domain superfamily D3H41_19875 IPR018368 ClpA/B, conserved site 1 D3H41_19875 IPR019489 Clp ATPase, C-terminal D3H41_19875 IPR003959 ATPase, AAA-type, core D3H41_19875 IPR003593 AAA+ ATPase domain D3H41_19875 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_19880 IPR011006 CheY-like superfamily D3H41_19880 IPR003593 AAA+ ATPase domain D3H41_19880 IPR002197 DNA binding HTH domain, Fis-type D3H41_19880 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_19880 IPR001789 Signal transduction response regulator, receiver domain D3H41_19880 IPR002078 RNA polymerase sigma factor 54 interaction domain D3H41_19880 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 D3H41_19880 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 D3H41_19880 IPR025944 Sigma-54 interaction domain, conserved site D3H41_19880 IPR009057 Homeobox-like domain superfamily D3H41_19905 IPR018392 LysM domain D3H41_19905 IPR011055 Duplicated hybrid motif D3H41_19905 IPR016047 Peptidase M23 D3H41_19905 IPR013731 Opacity-associated protein A, N-terminal D3H41_19910 IPR011004 Trimeric LpxA-like superfamily D3H41_19910 IPR018357 Hexapeptide transferase, conserved site D3H41_19910 IPR001451 Hexapeptide repeat D3H41_19915 IPR001466 Beta-lactamase-related D3H41_19915 IPR001586 Beta-lactamase, class-C active site D3H41_19915 IPR012338 Beta-lactamase/transpeptidase-like D3H41_19920 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_19920 IPR015424 Pyridoxal phosphate-dependent transferase D3H41_19920 IPR036390 Winged helix DNA-binding domain superfamily D3H41_19920 IPR004839 Aminotransferase, class I/classII D3H41_19920 IPR000524 Transcription regulator HTH, GntR D3H41_19920 IPR015421 Pyridoxal phosphate-dependent transferase, major domain D3H41_19935 IPR011034 Formyl transferase-like, C-terminal domain superfamily D3H41_19935 IPR036291 NAD(P)-binding domain superfamily D3H41_19935 IPR002376 Formyl transferase, N-terminal D3H41_19935 IPR036477 Formyl transferase, N-terminal domain superfamily D3H41_19935 IPR005793 Formyl transferase, C-terminal D3H41_19935 IPR021168 Bifunctional polymyxin resistance protein, ArnA D3H41_19935 IPR001509 NAD-dependent epimerase/dehydratase D3H41_19955 IPR016167 FAD-binding, type PCMH, subdomain 1 D3H41_19955 IPR016169 FAD-binding, type PCMH, subdomain 2 D3H41_19955 IPR006093 Oxygen oxidoreductase covalent FAD-binding site D3H41_19955 IPR006094 FAD linked oxidase, N-terminal D3H41_19955 IPR012951 Berberine/berberine-like D3H41_19955 IPR016166 FAD-binding domain, PCMH-type D3H41_19955 IPR036318 FAD-binding, type PCMH-like superfamily D3H41_19965 IPR029055 Nucleophile aminohydrolases, N-terminal D3H41_19965 IPR029132 Choloylglycine hydrolase/NAAA C-terminal D3H41_19970 IPR015875 IMP dehydrogenase / GMP reductase, conserved site D3H41_19970 IPR013785 Aldolase-type TIM barrel D3H41_19970 IPR001093 IMP dehydrogenase/GMP reductase D3H41_19970 IPR005993 GMP reductase D3H41_19975 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase D3H41_19975 IPR017953 Carbohydrate kinase, predicted, conserved site D3H41_19975 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr D3H41_19975 IPR029056 Ribokinase-like D3H41_19975 IPR004443 YjeF N-terminal domain D3H41_19975 IPR036652 YjeF N-terminal domain superfamily D3H41_19985 IPR001789 Signal transduction response regulator, receiver domain D3H41_19985 IPR011006 CheY-like superfamily D3H41_19990 IPR036812 NADP-dependent oxidoreductase domain superfamily D3H41_19990 IPR023210 NADP-dependent oxidoreductase domain D3H41_19990 IPR020471 Aldo/keto reductase D3H41_20005 IPR001807 Chloride channel, voltage gated D3H41_20005 IPR014743 Chloride channel, core D3H41_20005 IPR023861 Chloride channel, ClcA D3H41_20015 IPR018234 GTP cyclohydrolase I, conserved site D3H41_20015 IPR001474 GTP cyclohydrolase I D3H41_20015 IPR020602 GTP cyclohydrolase I domain D3H41_20020 IPR001453 MoaB/Mog domain D3H41_20020 IPR008284 Molybdenum cofactor biosynthesis, conserved site D3H41_20020 IPR038987 Molybdopterin biosynthesis protein MoeA-like D3H41_20020 IPR036425 MoaB/Mog-like domain superfamily D3H41_20020 IPR005111 MoeA, C-terminal, domain IV D3H41_20020 IPR036688 MoeA, C-terminal, domain IV superfamily D3H41_20020 IPR005110 MoeA, N-terminal and linker domain D3H41_20020 IPR036135 MoeA, N-terminal and linker domain superfamily D3H41_20025 IPR035985 Ubiquitin-activating enzyme D3H41_20025 IPR012730 Molybdopterin synthase sulfurylase MoeB D3H41_20025 IPR000594 THIF-type NAD/FAD binding fold D3H41_20040 IPR001763 Rhodanese-like domain D3H41_20040 IPR001307 Thiosulphate sulfurtransferase, conserved site D3H41_20040 IPR036873 Rhodanese-like domain superfamily D3H41_20060 IPR013785 Aldolase-type TIM barrel D3H41_20060 IPR018225 Transaldolase, active site D3H41_20060 IPR004730 Transaldolase type 1 D3H41_20060 IPR001585 Transaldolase/Fructose-6-phosphate aldolase D3H41_20065 IPR033247 Transketolase family D3H41_20065 IPR005475 Transketolase-like, pyrimidine-binding domain D3H41_20065 IPR005478 Transketolase, bacterial-like D3H41_20065 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II D3H41_20065 IPR033248 Transketolase, C-terminal domain D3H41_20065 IPR029061 Thiamin diphosphate-binding fold D3H41_20065 IPR005474 Transketolase, N-terminal D3H41_20065 IPR020826 Transketolase binding site D3H41_20070 IPR000014 PAS domain D3H41_20070 IPR001610 PAC motif D3H41_20070 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain D3H41_20070 IPR003660 HAMP domain D3H41_20070 IPR013655 PAS fold-3 D3H41_20070 IPR035965 PAS domain superfamily D3H41_20070 IPR004090 Chemotaxis methyl-accepting receptor D3H41_20075 IPR036259 MFS transporter superfamily D3H41_20075 IPR020846 Major facilitator superfamily domain D3H41_20075 IPR011701 Major facilitator superfamily D3H41_20080 IPR006218 DAHP synthetase I/KDSA D3H41_20080 IPR013785 Aldolase-type TIM barrel D3H41_20080 IPR006219 DHAP synthase, class 1 D3H41_20090 IPR006664 Outer membrane protein, bacterial D3H41_20090 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel D3H41_20090 IPR006665 OmpA-like domain D3H41_20090 IPR000498 Outer membrane protein OmpA-like, transmembrane domain D3H41_20090 IPR002368 Outer membrane protein, OmpA D3H41_20090 IPR036737 OmpA-like domain superfamily D3H41_20090 IPR006690 Outer membrane protein, OmpA-like, conserved site D3H41_20095 IPR010976 Beta-phosphoglucomutase hydrolase D3H41_20095 IPR023198 Phosphoglycolate phosphatase-like, domain 2 D3H41_20095 IPR036412 HAD-like superfamily D3H41_20095 IPR023214 HAD superfamily D3H41_20095 IPR041492 Haloacid dehalogenase-like hydrolase D3H41_20095 IPR006439 HAD hydrolase, subfamily IA D3H41_20100 IPR000352 Peptide chain release factor class I D3H41_20105 IPR003660 HAMP domain D3H41_20105 IPR000727 Target SNARE coiled-coil homology domain D3H41_20105 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain D3H41_20105 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain D3H41_20105 IPR004090 Chemotaxis methyl-accepting receptor D3H41_20110 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D3H41_20110 IPR001036 Acriflavin resistance protein D3H41_20110 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 D3H41_20115 IPR006143 RND efflux pump, membrane fusion protein D3H41_20115 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain D3H41_20120 IPR016193 Cytidine deaminase-like D3H41_20120 IPR016192 APOBEC/CMP deaminase, zinc-binding D3H41_20120 IPR016473 Deoxycytidylate deaminase D3H41_20120 IPR015517 Deoxycytidylate deaminase-related D3H41_20120 IPR002125 Cytidine and deoxycytidylate deaminase domain D3H41_20120 IPR035105 Deoxycytidylate deaminase domain D3H41_20125 IPR011650 Peptidase M20, dimerisation domain D3H41_20125 IPR036264 Bacterial exopeptidase dimerisation domain D3H41_20125 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site D3H41_20125 IPR002933 Peptidase M20 D3H41_20125 IPR010161 Peptidase M20B, tripeptide aminopeptidase D3H41_20140 IPR000792 Transcription regulator LuxR, C-terminal D3H41_20140 IPR001789 Signal transduction response regulator, receiver domain D3H41_20140 IPR016032 Signal transduction response regulator, C-terminal effector D3H41_20140 IPR011006 CheY-like superfamily D3H41_20145 IPR042295 NarX-like, N-terminal domain superfamily D3H41_20145 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain D3H41_20145 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing D3H41_20145 IPR029095 NarX-like, N-terminal D3H41_20145 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3H41_20145 IPR003594 Histidine kinase/HSP90-like ATPase D3H41_20145 IPR003660 HAMP domain D3H41_20145 IPR005467 Histidine kinase domain D3H41_20150 IPR004496 Ferredoxin-type protein NapF D3H41_20150 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site D3H41_20150 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain D3H41_20160 IPR006656 Molybdopterin oxidoreductase D3H41_20160 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain D3H41_20160 IPR006657 Molybdopterin dinucleotide-binding domain D3H41_20160 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site D3H41_20160 IPR010051 Periplasmic nitrate reductase, large subunit D3H41_20160 IPR006311 Twin-arginine translocation pathway, signal sequence D3H41_20160 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain D3H41_20160 IPR009010 Aspartate decarboxylase-like domain superfamily D3H41_20165 IPR011031 Multihaem cytochrome D3H41_20165 IPR036280 Multiheme cytochrome superfamily D3H41_20165 IPR005591 Nitrate reductase cytochrome c-type subunit NapB D3H41_20170 IPR038266 NapC/NirT cytochrome c superfamily D3H41_20170 IPR011031 Multihaem cytochrome D3H41_20170 IPR005126 NapC/NirT cytochrome c, N-terminal D3H41_20170 IPR024717 Denitrification system component NapC/NirT/NrfH D3H41_20170 IPR036280 Multiheme cytochrome superfamily D3H41_20170 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT D3H41_20180 IPR029058 Alpha/Beta hydrolase fold D3H41_20180 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain D3H41_20180 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I D3H41_20190 IPR020616 Thiolase, N-terminal D3H41_20190 IPR020610 Thiolase, active site D3H41_20190 IPR020617 Thiolase, C-terminal D3H41_20190 IPR020613 Thiolase, conserved site D3H41_20190 IPR020615 Thiolase, acyl-enzyme intermediate active site D3H41_20190 IPR016039 Thiolase-like D3H41_20190 IPR002155 Thiolase D3H41_20195 IPR036291 NAD(P)-binding domain superfamily D3H41_20195 IPR011283 Acetoacetyl-CoA reductase D3H41_20195 IPR020904 Short-chain dehydrogenase/reductase, conserved site D3H41_20195 IPR002347 Short-chain dehydrogenase/reductase SDR D3H41_20200 IPR001123 Amino acid exporter protein, LeuE-type D3H41_20210 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial D3H41_20210 IPR022645 Protein-export membrane protein SecD/SecF, bacterial D3H41_20210 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site D3H41_20210 IPR005665 Protein-export membrane protein SecF, bacterial D3H41_20215 IPR005791 Protein translocase subunit SecD D3H41_20215 IPR027398 SecD export protein N-terminal TM domain D3H41_20215 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial D3H41_20215 IPR022645 Protein-export membrane protein SecD/SecF, bacterial D3H41_20215 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site D3H41_20215 IPR001036 Acriflavin resistance protein D3H41_20245 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain D3H41_20245 IPR011991 ArsR-like helix-turn-helix domain D3H41_20245 IPR019885 Transcription regulator HTH, AsnC-type, conserved site D3H41_20245 IPR011008 Dimeric alpha-beta barrel D3H41_20245 IPR000485 AsnC-type HTH domain D3H41_20245 IPR019888 Transcription regulator AsnC-type D3H41_20245 IPR036390 Winged helix DNA-binding domain superfamily D3H41_20245 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_20265 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain D3H41_20265 IPR005694 Efflux pump membrane protein D3H41_20265 IPR030196 Multidrug resistance protein MdtN D3H41_20270 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_20270 IPR023187 Transcriptional regulator MarR-type, conserved site D3H41_20270 IPR023071 Transcriptional regulator, SlyA D3H41_20270 IPR000835 MarR-type HTH domain D3H41_20270 IPR036390 Winged helix DNA-binding domain superfamily D3H41_20275 IPR035965 PAS domain superfamily D3H41_20275 IPR029151 Periplasmic sensor-like domain superfamily D3H41_20275 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3H41_20275 IPR015387 LuxQ, periplasmic D3H41_20275 IPR004358 Signal transduction histidine kinase-related protein, C-terminal D3H41_20275 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain D3H41_20275 IPR001789 Signal transduction response regulator, receiver domain D3H41_20275 IPR003594 Histidine kinase/HSP90-like ATPase D3H41_20275 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily D3H41_20275 IPR005467 Histidine kinase domain D3H41_20275 IPR011006 CheY-like superfamily D3H41_20280 IPR025997 Periplasmic binding protein D3H41_20280 IPR028082 Periplasmic binding protein-like I D3H41_20290 IPR035901 GIY-YIG endonuclease superfamily D3H41_20290 IPR000305 GIY-YIG endonuclease D3H41_20295 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_20295 IPR007432 Protein of unknown function DUF480 D3H41_20295 IPR036390 Winged helix DNA-binding domain superfamily D3H41_20305 IPR007458 Protein of unknown function DUF496 D3H41_20310 IPR002528 Multi antimicrobial extrusion protein D3H41_20315 IPR001789 Signal transduction response regulator, receiver domain D3H41_20315 IPR003660 HAMP domain D3H41_20315 IPR011006 CheY-like superfamily D3H41_20315 IPR005467 Histidine kinase domain D3H41_20315 IPR019247 Histidine kinase BarA, N-terminal D3H41_20315 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3H41_20315 IPR036641 HPT domain superfamily D3H41_20315 IPR004358 Signal transduction histidine kinase-related protein, C-terminal D3H41_20315 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain D3H41_20315 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily D3H41_20315 IPR003594 Histidine kinase/HSP90-like ATPase D3H41_20315 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain D3H41_20320 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site D3H41_20320 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain D3H41_20320 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family D3H41_20320 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain D3H41_20320 IPR036291 NAD(P)-binding domain superfamily D3H41_20320 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I D3H41_20340 IPR037402 HTH-type transcriptional regulator YidZ, PBP2 domain D3H41_20340 IPR023746 Transcription regulator HTH, YidZ D3H41_20340 IPR036390 Winged helix DNA-binding domain superfamily D3H41_20340 IPR005119 LysR, substrate-binding D3H41_20340 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_20340 IPR000847 Transcription regulator HTH, LysR D3H41_20355 IPR002293 Amino acid/polyamine transporter I D3H41_20360 IPR015424 Pyridoxal phosphate-dependent transferase D3H41_20360 IPR004839 Aminotransferase, class I/classII D3H41_20360 IPR015421 Pyridoxal phosphate-dependent transferase, major domain D3H41_20360 IPR000524 Transcription regulator HTH, GntR D3H41_20360 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_20360 IPR036390 Winged helix DNA-binding domain superfamily D3H41_20370 IPR004358 Signal transduction histidine kinase-related protein, C-terminal D3H41_20370 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily D3H41_20370 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain D3H41_20370 IPR005467 Histidine kinase domain D3H41_20370 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3H41_20370 IPR003594 Histidine kinase/HSP90-like ATPase D3H41_20370 IPR003660 HAMP domain D3H41_20370 IPR038515 CpxA, periplasmic domain superfamily D3H41_20370 IPR032404 Two-component sensor protein CpxA, periplasmic domain D3H41_20375 IPR039420 Transcriptional regulatory protein WalR-like D3H41_20375 IPR011006 CheY-like superfamily D3H41_20375 IPR001867 OmpR/PhoB-type DNA-binding domain D3H41_20375 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_20375 IPR016032 Signal transduction response regulator, C-terminal effector D3H41_20375 IPR001789 Signal transduction response regulator, receiver domain D3H41_20390 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal D3H41_20390 IPR020449 Transcription regulator HTH, AraC- type D3H41_20390 IPR009057 Homeobox-like domain superfamily D3H41_20390 IPR018060 DNA binding HTH domain, AraC-type D3H41_20400 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain D3H41_20405 IPR004147 UbiB domain D3H41_20405 IPR000719 Protein kinase domain D3H41_20405 IPR010232 Probable protein kinase UbiB D3H41_20405 IPR011009 Protein kinase-like domain superfamily D3H41_20410 IPR006669 Magnesium transporter MgtE D3H41_20410 IPR000644 CBS domain D3H41_20410 IPR006668 Magnesium transporter, MgtE intracellular domain D3H41_20410 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily D3H41_20410 IPR006667 SLC41 divalent cation transporters, integral membrane domain D3H41_20410 IPR038076 MgtE, N-terminal domain superfamily D3H41_20410 IPR038048 Magnesium transporter MgtE, transmembrane domain D3H41_20415 IPR030191 Cytosine permease D3H41_20415 IPR001248 Purine-cytosine permease D3H41_20415 IPR038271 Purine-cytosine permease superfamily D3H41_20420 IPR013108 Amidohydrolase 3 D3H41_20420 IPR032466 Metal-dependent hydrolase D3H41_20420 IPR011059 Metal-dependent hydrolase, composite domain superfamily D3H41_20425 IPR006674 HD domain D3H41_20425 IPR003607 HD/PDEase domain D3H41_20440 IPR011701 Major facilitator superfamily D3H41_20440 IPR023727 Lysophospholipid transporter LplT D3H41_20440 IPR036259 MFS transporter superfamily D3H41_20450 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily D3H41_20450 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB D3H41_20455 IPR029759 Glutathione peroxidase active site D3H41_20455 IPR000889 Glutathione peroxidase D3H41_20455 IPR036249 Thioredoxin-like superfamily D3H41_20470 IPR013766 Thioredoxin domain D3H41_20470 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL D3H41_20470 IPR036249 Thioredoxin-like superfamily D3H41_20470 IPR001853 DSBA-like thioredoxin domain D3H41_20485 IPR011006 CheY-like superfamily D3H41_20485 IPR001867 OmpR/PhoB-type DNA-binding domain D3H41_20485 IPR016032 Signal transduction response regulator, C-terminal effector D3H41_20485 IPR001789 Signal transduction response regulator, receiver domain D3H41_20485 IPR039420 Transcriptional regulatory protein WalR-like D3H41_20485 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_20490 IPR004358 Signal transduction histidine kinase-related protein, C-terminal D3H41_20490 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain D3H41_20490 IPR005467 Histidine kinase domain D3H41_20490 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily D3H41_20490 IPR003594 Histidine kinase/HSP90-like ATPase D3H41_20490 IPR003660 HAMP domain D3H41_20490 IPR038515 CpxA, periplasmic domain superfamily D3H41_20490 IPR032404 Two-component sensor protein CpxA, periplasmic domain D3H41_20490 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3H41_20500 IPR036945 Diacylglycerol kinase (DAGK) superfamily D3H41_20500 IPR033718 Diacylglycerol kinase, prokaryotic D3H41_20500 IPR000829 DAGK family D3H41_20505 IPR017850 Alkaline-phosphatase-like, core domain superfamily D3H41_20505 IPR012549 Phosphoethanolamine transferase, N-terminal D3H41_20505 IPR040423 Phosphoethanolamine transferase D3H41_20505 IPR000917 Sulfatase, N-terminal D3H41_20510 IPR000683 Oxidoreductase, N-terminal D3H41_20510 IPR036291 NAD(P)-binding domain superfamily D3H41_20525 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase D3H41_20525 IPR037483 YjjU-like D3H41_20525 IPR002641 Patatin-like phospholipase domain D3H41_20530 IPR011051 RmlC-like cupin domain superfamily D3H41_20530 IPR012093 Pirin D3H41_20530 IPR008778 Pirin, C-terminal domain D3H41_20530 IPR014710 RmlC-like jelly roll fold D3H41_20530 IPR003829 Pirin, N-terminal domain D3H41_20535 IPR012156 Cold shock, CspA D3H41_20535 IPR012340 Nucleic acid-binding, OB-fold D3H41_20535 IPR002059 Cold-shock protein, DNA-binding D3H41_20535 IPR019844 Cold-shock (CSD) domain D3H41_20535 IPR011129 Cold shock domain D3H41_20550 IPR032466 Metal-dependent hydrolase D3H41_20550 IPR006330 Adenosine/adenine deaminase D3H41_20550 IPR028892 Adenine deaminase type 2 D3H41_20550 IPR001365 Adenosine/AMP deaminase domain D3H41_20555 IPR011906 Glutaredoxin domain D3H41_20555 IPR037944 Peroxiredoxin-5-like D3H41_20555 IPR013740 Redoxin D3H41_20555 IPR014025 Glutaredoxin subgroup D3H41_20555 IPR011767 Glutaredoxin active site D3H41_20555 IPR002109 Glutaredoxin D3H41_20555 IPR036249 Thioredoxin-like superfamily D3H41_20565 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A D3H41_20565 IPR015956 Penicillin-binding protein, C-terminal domain superfamily D3H41_20565 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal D3H41_20565 IPR012338 Beta-lactamase/transpeptidase-like D3H41_20565 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily D3H41_20565 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal D3H41_20575 IPR010987 Glutathione S-transferase, C-terminal-like D3H41_20575 IPR036282 Glutathione S-transferase, C-terminal domain superfamily D3H41_20575 IPR040079 Glutathione Transferase family D3H41_20575 IPR004045 Glutathione S-transferase, N-terminal D3H41_20575 IPR036249 Thioredoxin-like superfamily D3H41_20585 IPR001362 Glycoside hydrolase, family 32 D3H41_20585 IPR006232 Sucrose-6-phosphate hydrolase D3H41_20585 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily D3H41_20585 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily D3H41_20585 IPR018053 Glycoside hydrolase, family 32, active site D3H41_20585 IPR013189 Glycosyl hydrolase family 32, C-terminal D3H41_20585 IPR013148 Glycosyl hydrolase family 32, N-terminal D3H41_20590 IPR029056 Ribokinase-like D3H41_20590 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site D3H41_20590 IPR011611 Carbohydrate kinase PfkB D3H41_20590 IPR002139 Ribokinase/fructokinase D3H41_20595 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component D3H41_20595 IPR001996 Phosphotransferase system, IIB component, type 1 D3H41_20595 IPR003352 Phosphotransferase system, EIIC D3H41_20595 IPR013013 Phosphotransferase system, EIIC component, type 1 D3H41_20595 IPR010973 Phosphotransferase system, sucrose-specific IIBC component D3H41_20595 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site D3H41_20595 IPR036878 Glucose permease domain IIB D3H41_20600 IPR028082 Periplasmic binding protein-like I D3H41_20600 IPR010982 Lambda repressor-like, DNA-binding domain superfamily D3H41_20600 IPR000843 LacI-type HTH domain D3H41_20605 IPR036998 Porin, LamB-type superfamily D3H41_20605 IPR021570 LamB-type porin N-terminal domain D3H41_20605 IPR003192 Porin, LamB-type D3H41_20620 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase D3H41_20620 IPR036291 NAD(P)-binding domain superfamily D3H41_20620 IPR002347 Short-chain dehydrogenase/reductase SDR D3H41_20620 IPR020904 Short-chain dehydrogenase/reductase, conserved site D3H41_20655 IPR005119 LysR, substrate-binding D3H41_20655 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_20655 IPR036390 Winged helix DNA-binding domain superfamily D3H41_20655 IPR000847 Transcription regulator HTH, LysR D3H41_20660 IPR018060 DNA binding HTH domain, AraC-type D3H41_20660 IPR020449 Transcription regulator HTH, AraC- type D3H41_20660 IPR018062 HTH domain AraC-type, conserved site D3H41_20660 IPR009057 Homeobox-like domain superfamily D3H41_20660 IPR002491 ABC transporter periplasmic binding domain D3H41_20665 IPR015424 Pyridoxal phosphate-dependent transferase D3H41_20665 IPR004839 Aminotransferase, class I/classII D3H41_20665 IPR015421 Pyridoxal phosphate-dependent transferase, major domain D3H41_20665 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 D3H41_20690 IPR028622 ATP-dependent RNA helicase RhlE D3H41_20690 IPR014001 Helicase superfamily 1/2, ATP-binding domain D3H41_20690 IPR011545 DEAD/DEAH box helicase domain D3H41_20690 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site D3H41_20690 IPR001650 Helicase, C-terminal D3H41_20690 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_20690 IPR014014 RNA helicase, DEAD-box type, Q motif D3H41_20700 IPR000847 Transcription regulator HTH, LysR D3H41_20700 IPR005119 LysR, substrate-binding D3H41_20700 IPR036390 Winged helix DNA-binding domain superfamily D3H41_20700 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_20705 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_20705 IPR000847 Transcription regulator HTH, LysR D3H41_20705 IPR005119 LysR, substrate-binding D3H41_20705 IPR036390 Winged helix DNA-binding domain superfamily D3H41_20715 IPR013785 Aldolase-type TIM barrel D3H41_20715 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal D3H41_20720 IPR011032 GroES-like superfamily D3H41_20720 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site D3H41_20720 IPR004627 L-threonine 3-dehydrogenase D3H41_20720 IPR013154 Alcohol dehydrogenase, N-terminal D3H41_20720 IPR036291 NAD(P)-binding domain superfamily D3H41_20720 IPR020843 Polyketide synthase, enoylreductase domain D3H41_20720 IPR013149 Alcohol dehydrogenase, C-terminal D3H41_20730 IPR002347 Short-chain dehydrogenase/reductase SDR D3H41_20730 IPR036291 NAD(P)-binding domain superfamily D3H41_20730 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase D3H41_20730 IPR020904 Short-chain dehydrogenase/reductase, conserved site D3H41_20740 IPR036390 Winged helix DNA-binding domain superfamily D3H41_20740 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_20740 IPR015424 Pyridoxal phosphate-dependent transferase D3H41_20740 IPR000524 Transcription regulator HTH, GntR D3H41_20740 IPR004839 Aminotransferase, class I/classII D3H41_20740 IPR015421 Pyridoxal phosphate-dependent transferase, major domain D3H41_20740 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 D3H41_20745 IPR000994 Peptidase M24 D3H41_20745 IPR014335 Ectoine utilization protein EutD D3H41_20745 IPR000587 Creatinase, N-terminal D3H41_20745 IPR036005 Creatinase/aminopeptidase-like D3H41_20745 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal D3H41_20750 IPR007036 Succinylglutamate desuccinylase/aspartoacylase D3H41_20750 IPR014336 N-alpha-acetyl diaminobutyrate deacetylase DoeB D3H41_20755 IPR036390 Winged helix DNA-binding domain superfamily D3H41_20755 IPR011991 ArsR-like helix-turn-helix domain D3H41_20755 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_20755 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain D3H41_20755 IPR019888 Transcription regulator AsnC-type D3H41_20755 IPR000485 AsnC-type HTH domain D3H41_20755 IPR011008 Dimeric alpha-beta barrel D3H41_20760 IPR029510 Aldehyde dehydrogenase, glutamic acid active site D3H41_20760 IPR016161 Aldehyde/histidinol dehydrogenase D3H41_20760 IPR015590 Aldehyde dehydrogenase domain D3H41_20760 IPR016162 Aldehyde dehydrogenase, N-terminal D3H41_20760 IPR016163 Aldehyde dehydrogenase, C-terminal D3H41_20760 IPR016160 Aldehyde dehydrogenase, cysteine active site D3H41_20765 IPR015424 Pyridoxal phosphate-dependent transferase D3H41_20765 IPR005814 Aminotransferase class-III D3H41_20765 IPR015421 Pyridoxal phosphate-dependent transferase, major domain D3H41_20765 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 D3H41_20770 IPR018636 Protein of unknown function DUF2058 D3H41_20785 IPR000847 Transcription regulator HTH, LysR D3H41_20785 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_20785 IPR005119 LysR, substrate-binding D3H41_20785 IPR036390 Winged helix DNA-binding domain superfamily D3H41_20795 IPR006034 Asparaginase/glutaminase-like D3H41_20795 IPR020827 Asparaginase/glutaminase, active site 1 D3H41_20795 IPR027475 Asparaginase/glutaminase, active site 2 D3H41_20795 IPR027474 L-asparaginase, N-terminal D3H41_20795 IPR027473 L-asparaginase, C-terminal D3H41_20795 IPR036152 Asparaginase/glutaminase-like superfamily D3H41_20795 IPR004550 L-asparaginase, type II D3H41_20795 IPR040919 Asparaginase/glutaminase, C-terminal D3H41_20795 IPR037152 L-asparaginase, N-terminal domain superfamily D3H41_20800 IPR026530 Phosphoenolpyruvate synthase regulatory protein D3H41_20800 IPR005177 Bifunctional kinase-pyrophosphorylase D3H41_20805 IPR013815 ATP-grasp fold, subdomain 1 D3H41_20805 IPR018274 PEP-utilising enzyme, active site D3H41_20805 IPR000121 PEP-utilising enzyme, C-terminal D3H41_20805 IPR040442 Pyruvate kinase-like domain superfamily D3H41_20805 IPR023151 PEP-utilising enzyme, conserved site D3H41_20805 IPR008279 PEP-utilising enzyme, mobile domain D3H41_20805 IPR036637 Phosphohistidine domain superfamily D3H41_20805 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding D3H41_20805 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily D3H41_20805 IPR006319 Phosphoenolpyruvate synthase D3H41_20815 IPR000792 Transcription regulator LuxR, C-terminal D3H41_20815 IPR001789 Signal transduction response regulator, receiver domain D3H41_20815 IPR016032 Signal transduction response regulator, C-terminal effector D3H41_20815 IPR011006 CheY-like superfamily D3H41_20820 IPR024088 Tyrosine-tRNA ligase, bacterial-type D3H41_20820 IPR002307 Tyrosine-tRNA ligase D3H41_20820 IPR036986 RNA-binding S4 domain superfamily D3H41_20820 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 D3H41_20820 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site D3H41_20820 IPR002305 Aminoacyl-tRNA synthetase, class Ic D3H41_20820 IPR002942 RNA-binding S4 domain D3H41_20820 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3H41_20825 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein D3H41_20825 IPR006059 Bacterial extracellular solute-binding protein D3H41_20840 IPR006103 Glycoside hydrolase family 2, catalytic domain D3H41_20840 IPR023232 Glycoside hydrolase, family 2, active site D3H41_20840 IPR006101 Glycoside hydrolase, family 2 D3H41_20840 IPR013783 Immunoglobulin-like fold D3H41_20840 IPR023230 Glycoside hydrolase, family 2, conserved site D3H41_20840 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich D3H41_20840 IPR017853 Glycoside hydrolase superfamily D3H41_20840 IPR006104 Glycosyl hydrolases family 2, sugar binding domain D3H41_20840 IPR008979 Galactose-binding-like domain superfamily D3H41_20840 IPR040605 Glycoside hydrolase family 2, domain 5 D3H41_20840 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily D3H41_20845 IPR000060 BCCT transporter family D3H41_20850 IPR011663 UbiC transcription regulator-associated D3H41_20850 IPR017722 Phosphonate utilization transcriptional regulator PhnR D3H41_20850 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily D3H41_20850 IPR000524 Transcription regulator HTH, GntR D3H41_20850 IPR036390 Winged helix DNA-binding domain superfamily D3H41_20850 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_20875 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_20875 IPR013611 Transport-associated OB, type 2 D3H41_20875 IPR017871 ABC transporter, conserved site D3H41_20875 IPR015853 ABC transporter, ferric cation import, FbpC D3H41_20875 IPR003593 AAA+ ATPase domain D3H41_20875 IPR003439 ABC transporter-like D3H41_20875 IPR008995 Molybdate/tungstate binding, C-terminal D3H41_20895 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D3H41_20895 IPR001036 Acriflavin resistance protein D3H41_20915 IPR001036 Acriflavin resistance protein D3H41_20915 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D3H41_20920 IPR039562 Membrane fusion protein, biotin-lipoyl like domain D3H41_20920 IPR006143 RND efflux pump, membrane fusion protein D3H41_20920 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA D3H41_20925 IPR025202 Phospholipase D-like domain D3H41_20925 IPR001736 Phospholipase D/Transphosphatidylase D3H41_20925 IPR030871 Cardiolipin synthase C D3H41_20930 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site D3H41_20930 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3H41_20930 IPR023165 rRNA adenine dimethylase-like D3H41_20930 IPR011530 Ribosomal RNA adenine dimethylase D3H41_20930 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm D3H41_20930 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal D3H41_20950 IPR000551 MerR-type HTH domain D3H41_20950 IPR010211 Redox-sensitive transcriptional activator SoxR D3H41_20950 IPR015358 Transcription regulator MerR, DNA binding D3H41_20950 IPR009061 Putative DNA-binding domain superfamily D3H41_20965 IPR036390 Winged helix DNA-binding domain superfamily D3H41_20965 IPR000847 Transcription regulator HTH, LysR D3H41_20965 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_20965 IPR005119 LysR, substrate-binding D3H41_20965 IPR037414 Transcriptional activator protein LysR, PBP2 domain D3H41_20975 IPR029065 Enolase C-terminal domain-like D3H41_20975 IPR029017 Enolase-like, N-terminal D3H41_20975 IPR036849 Enolase-like, C-terminal domain superfamily D3H41_20975 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site D3H41_20975 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal D3H41_20975 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain D3H41_20975 IPR034603 Dipeptide epimerase D3H41_20985 IPR031157 Tr-type G domain, conserved site D3H41_20985 IPR000640 Elongation factor EFG, domain V-like D3H41_20985 IPR020568 Ribosomal protein S5 domain 2-type fold D3H41_20985 IPR035649 EFG, domain V D3H41_20985 IPR035647 EF-G domain III/V-like D3H41_20985 IPR041095 Elongation Factor G, domain II D3H41_20985 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D3H41_20985 IPR005225 Small GTP-binding protein domain D3H41_20985 IPR000795 Transcription factor, GTP-binding domain D3H41_20985 IPR009000 Translation protein, beta-barrel domain superfamily D3H41_20985 IPR004540 Translation elongation factor EFG/EF2 D3H41_20985 IPR005517 Translation elongation factor EFG/EF2, domain IV D3H41_20985 IPR004161 Translation elongation factor EFTu-like, domain 2 D3H41_20985 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_20985 IPR009022 Elongation factor G, domain III D3H41_21010 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_21010 IPR002852 Uncharacterised protein family UPF0251 D3H41_21010 IPR013324 RNA polymerase sigma factor, region 3/4-like D3H41_21020 IPR000515 ABC transporter type 1, transmembrane domain MetI-like D3H41_21020 IPR035906 MetI-like superfamily D3H41_21025 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_21025 IPR005892 Glycine betaine transport ATP-binding subunit D3H41_21025 IPR000644 CBS domain D3H41_21025 IPR017871 ABC transporter, conserved site D3H41_21025 IPR003439 ABC transporter-like D3H41_21025 IPR003593 AAA+ ATPase domain D3H41_21030 IPR007298 Copper resistance lipoprotein NlpE D3H41_21030 IPR038139 NlpE, C-terminal domain superfamily D3H41_21030 IPR033450 NlpE, C-terminal OB domain D3H41_21035 IPR010583 MltA-interacting MipA D3H41_21050 IPR036390 Winged helix DNA-binding domain superfamily D3H41_21050 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_21050 IPR000847 Transcription regulator HTH, LysR D3H41_21050 IPR005119 LysR, substrate-binding D3H41_21075 IPR007229 Nicotinate phosphoribosyltransferase family D3H41_21075 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase D3H41_21075 IPR006406 Nicotinate phosphoribosyltransferase D3H41_21075 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain D3H41_21075 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal D3H41_21085 IPR000868 Isochorismatase-like D3H41_21085 IPR036380 Isochorismatase-like superfamily D3H41_21100 IPR014036 DeoR C-terminal sensor domain D3H41_21100 IPR001034 DeoR-type HTH domain D3H41_21100 IPR037171 NagB/RpiA transferase-like D3H41_21100 IPR018356 Transcription regulator, HTH DeoR-type, conserved site D3H41_21100 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_21100 IPR036390 Winged helix DNA-binding domain superfamily D3H41_21105 IPR002579 Peptide methionine sulphoxide reductase MrsB D3H41_21105 IPR011057 Mss4-like superfamily D3H41_21105 IPR002569 Peptide methionine sulphoxide reductase MsrA D3H41_21105 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily D3H41_21105 IPR028427 Peptide methionine sulfoxide reductase D3H41_21110 IPR004136 Nitronate monooxygenase D3H41_21110 IPR013785 Aldolase-type TIM barrel D3H41_21115 IPR002293 Amino acid/polyamine transporter I D3H41_21115 IPR004758 Amino acid transporter D3H41_21120 IPR009246 Ethanolamine ammonia-lyase light chain D3H41_21120 IPR042255 Ethanolamine ammonia-lyase light chain, N-terminal D3H41_21120 IPR042251 Ethanolamine ammonia-lyase light chain, C-terminal D3H41_21125 IPR013785 Aldolase-type TIM barrel D3H41_21125 IPR010628 Ethanolamine ammonia lyase large subunit D3H41_21130 IPR018060 DNA binding HTH domain, AraC-type D3H41_21130 IPR009057 Homeobox-like domain superfamily D3H41_21130 IPR018062 HTH domain AraC-type, conserved site D3H41_21135 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily D3H41_21135 IPR009057 Homeobox-like domain superfamily D3H41_21135 IPR013570 Transcription regulator YsiA, C-terminal D3H41_21135 IPR001647 DNA-binding HTH domain, TetR-type D3H41_21150 IPR005119 LysR, substrate-binding D3H41_21150 IPR000847 Transcription regulator HTH, LysR D3H41_21150 IPR037418 HTH-type transcriptional regulator TrpI, PBP2 D3H41_21150 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_21150 IPR036390 Winged helix DNA-binding domain superfamily D3H41_21155 IPR001123 Amino acid exporter protein, LeuE-type D3H41_21155 IPR004778 Homoserine/Threonine efflux protein D3H41_21165 IPR027410 TCP-1-like chaperonin intermediate domain superfamily D3H41_21165 IPR027413 GroEL-like equatorial domain superfamily D3H41_21165 IPR027409 GroEL-like apical domain superfamily D3H41_21165 IPR002423 Chaperonin Cpn60/TCP-1 family D3H41_21165 IPR001844 Chaperonin Cpn60 D3H41_21165 IPR018370 Chaperonin Cpn60, conserved site D3H41_21170 IPR011032 GroES-like superfamily D3H41_21170 IPR018369 Chaperonin GroES, conserved site D3H41_21170 IPR037124 GroES chaperonin superfamily D3H41_21170 IPR020818 GroES chaperonin family D3H41_21180 IPR036873 Rhodanese-like domain superfamily D3H41_21180 IPR001763 Rhodanese-like domain D3H41_21180 IPR023695 Thiosulfate sulfurtransferase, bacterial D3H41_21195 IPR013785 Aldolase-type TIM barrel D3H41_21195 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent D3H41_21195 IPR000262 FMN-dependent dehydrogenase D3H41_21215 IPR001029 Flagellin, D0/D1 domain D3H41_21215 IPR013384 Flagellar hook-associated protein 3 D3H41_21220 IPR002371 Flagellar hook-associated protein 1 D3H41_21220 IPR001444 Flagellar basal body rod protein, N-terminal D3H41_21220 IPR019776 Flagellar basal body rod protein, conserved site D3H41_21220 IPR010930 Flagellar basal-body/hook protein, C-terminal domain D3H41_21225 IPR013377 Peptidoglycan hydrolase FlgJ D3H41_21225 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain D3H41_21225 IPR023346 Lysozyme-like domain superfamily D3H41_21225 IPR019301 Flagellar protein FlgJ, N-terminal D3H41_21230 IPR001782 Flagellar P-ring protein D3H41_21235 IPR000527 Flagellar L-ring protein D3H41_21240 IPR012834 Flagellar basal-body rod FlgG D3H41_21240 IPR001444 Flagellar basal body rod protein, N-terminal D3H41_21240 IPR019776 Flagellar basal body rod protein, conserved site D3H41_21240 IPR020013 Flagellar hook-basal body protein, FlgE/F/G D3H41_21240 IPR010930 Flagellar basal-body/hook protein, C-terminal domain D3H41_21240 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like D3H41_21245 IPR019776 Flagellar basal body rod protein, conserved site D3H41_21245 IPR020013 Flagellar hook-basal body protein, FlgE/F/G D3H41_21245 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like D3H41_21245 IPR001444 Flagellar basal body rod protein, N-terminal D3H41_21245 IPR010930 Flagellar basal-body/hook protein, C-terminal domain D3H41_21250 IPR037058 Flagellar hook protein FlgE superfamily D3H41_21250 IPR001444 Flagellar basal body rod protein, N-terminal D3H41_21250 IPR019776 Flagellar basal body rod protein, conserved site D3H41_21250 IPR011491 Flagellar hook protein FlgE D3H41_21250 IPR020013 Flagellar hook-basal body protein, FlgE/F/G D3H41_21250 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like D3H41_21250 IPR010930 Flagellar basal-body/hook protein, C-terminal domain D3H41_21255 IPR025963 FlgD Tudor-like domain D3H41_21255 IPR025965 FlgD Ig-like domain D3H41_21255 IPR005648 Flagellar hook capping protein D3H41_21260 IPR001444 Flagellar basal body rod protein, N-terminal D3H41_21260 IPR010930 Flagellar basal-body/hook protein, C-terminal domain D3H41_21260 IPR006299 Flagellar basal-body rod protein FlgC D3H41_21260 IPR019776 Flagellar basal body rod protein, conserved site D3H41_21265 IPR001444 Flagellar basal body rod protein, N-terminal D3H41_21265 IPR006300 Flagellar basal-body rod protein FlgB D3H41_21265 IPR019776 Flagellar basal body rod protein, conserved site D3H41_21285 IPR008258 Transglycosylase SLT domain 1 D3H41_21285 IPR000189 Prokaryotic transglycosylase, active site D3H41_21285 IPR023346 Lysozyme-like domain superfamily D3H41_21290 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site D3H41_21290 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3H41_21290 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding D3H41_21290 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain D3H41_21290 IPR002300 Aminoacyl-tRNA synthetase, class Ia D3H41_21290 IPR033709 Isoleucyl tRNA synthetase type 2, anticodon-binding domain D3H41_21290 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding D3H41_21290 IPR002301 Isoleucine-tRNA ligase D3H41_21290 IPR023586 Isoleucine-tRNA ligase, type 2 D3H41_21310 IPR005131 Serine dehydratase beta chain D3H41_21310 IPR029009 Allosteric substrate binding domain superfamily D3H41_21310 IPR005130 Serine dehydratase-like, alpha subunit D3H41_21310 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form D3H41_21320 IPR000847 Transcription regulator HTH, LysR D3H41_21320 IPR036390 Winged helix DNA-binding domain superfamily D3H41_21320 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_21320 IPR005119 LysR, substrate-binding D3H41_21325 IPR000847 Transcription regulator HTH, LysR D3H41_21325 IPR005119 LysR, substrate-binding D3H41_21325 IPR036390 Winged helix DNA-binding domain superfamily D3H41_21325 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_21330 IPR006690 Outer membrane protein, OmpA-like, conserved site D3H41_21330 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel D3H41_21330 IPR000498 Outer membrane protein OmpA-like, transmembrane domain D3H41_21330 IPR036737 OmpA-like domain superfamily D3H41_21330 IPR006665 OmpA-like domain D3H41_21330 IPR006664 Outer membrane protein, bacterial D3H41_21330 IPR002368 Outer membrane protein, OmpA D3H41_21335 IPR040626 Cytosolic carboxypeptidase, N-terminal D3H41_21335 IPR000834 Peptidase M14, carboxypeptidase A D3H41_21340 IPR036188 FAD/NAD(P)-binding domain superfamily D3H41_21340 IPR006076 FAD dependent oxidoreductase D3H41_21350 IPR007488 Protein of unknown function DUF535 D3H41_21365 IPR036390 Winged helix DNA-binding domain superfamily D3H41_21365 IPR017722 Phosphonate utilization transcriptional regulator PhnR D3H41_21365 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily D3H41_21365 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_21365 IPR011663 UbiC transcription regulator-associated D3H41_21365 IPR000524 Transcription regulator HTH, GntR D3H41_21370 IPR035906 MetI-like superfamily D3H41_21370 IPR000515 ABC transporter type 1, transmembrane domain MetI-like D3H41_21375 IPR017871 ABC transporter, conserved site D3H41_21375 IPR003439 ABC transporter-like D3H41_21375 IPR003593 AAA+ ATPase domain D3H41_21375 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_21375 IPR015853 ABC transporter, ferric cation import, FbpC D3H41_21375 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 D3H41_21375 IPR008995 Molybdate/tungstate binding, C-terminal D3H41_21380 IPR026045 Ferric binding protein D3H41_21385 IPR015424 Pyridoxal phosphate-dependent transferase D3H41_21385 IPR012703 2-aminoethylphosphonate--pyruvate transaminase D3H41_21385 IPR000192 Aminotransferase class V domain D3H41_21385 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 D3H41_21385 IPR015421 Pyridoxal phosphate-dependent transferase, major domain D3H41_21385 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase D3H41_21395 IPR036412 HAD-like superfamily D3H41_21395 IPR006439 HAD hydrolase, subfamily IA D3H41_21395 IPR041492 Haloacid dehalogenase-like hydrolase D3H41_21395 IPR023198 Phosphoglycolate phosphatase-like, domain 2 D3H41_21395 IPR023214 HAD superfamily D3H41_21395 IPR006323 Phosphonoacetaldehyde hydrolase D3H41_21400 IPR010982 Lambda repressor-like, DNA-binding domain superfamily D3H41_21400 IPR000843 LacI-type HTH domain D3H41_21400 IPR028082 Periplasmic binding protein-like I D3H41_21405 IPR002178 PTS EIIA type-2 domain D3H41_21405 IPR016152 Phosphotransferase/anion transporter D3H41_21415 IPR004703 Phosphotransferase system, sugar-specific permease component D3H41_21430 IPR008265 Lipase, GDSL, active site D3H41_21430 IPR001087 GDSL lipase/esterase D3H41_21430 IPR036514 SGNH hydrolase superfamily D3H41_21435 IPR009057 Homeobox-like domain superfamily D3H41_21435 IPR001647 DNA-binding HTH domain, TetR-type D3H41_21445 IPR010131 RND efflux system, outer membrane lipoprotein, NodT D3H41_21445 IPR003423 Outer membrane efflux protein D3H41_21450 IPR003593 AAA+ ATPase domain D3H41_21450 IPR003439 ABC transporter-like D3H41_21450 IPR003838 ABC transporter permease protein domain D3H41_21450 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_21450 IPR017911 ABC transporter, macrolide export, ATP-binding domain D3H41_21450 IPR017871 ABC transporter, conserved site D3H41_21450 IPR025857 MacB-like periplasmic core domain D3H41_21455 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain D3H41_21455 IPR006143 RND efflux pump, membrane fusion protein D3H41_21455 IPR030190 Macrolide export protein MacA D3H41_21460 IPR042117 OMPP1/FadL/TodX superfamily D3H41_21460 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) D3H41_21465 IPR018338 Carbonic anhydrase, alpha-class, conserved site D3H41_21465 IPR036398 Alpha carbonic anhydrase domain superfamily D3H41_21465 IPR041891 Carbonic anhydrase, prokaryotic-like D3H41_21465 IPR001148 Alpha carbonic anhydrase domain D3H41_21465 IPR023561 Carbonic anhydrase, alpha-class D3H41_21470 IPR006513 Conserved hypothetical protein CHP01626, YtfJ D3H41_21485 IPR023214 HAD superfamily D3H41_21485 IPR023198 Phosphoglycolate phosphatase-like, domain 2 D3H41_21485 IPR006439 HAD hydrolase, subfamily IA D3H41_21485 IPR041492 Haloacid dehalogenase-like hydrolase D3H41_21485 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB D3H41_21485 IPR036412 HAD-like superfamily D3H41_21490 IPR036390 Winged helix DNA-binding domain superfamily D3H41_21490 IPR000847 Transcription regulator HTH, LysR D3H41_21490 IPR005119 LysR, substrate-binding D3H41_21490 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_21525 IPR018357 Hexapeptide transferase, conserved site D3H41_21525 IPR024688 Maltose/galactoside acetyltransferase D3H41_21525 IPR011004 Trimeric LpxA-like superfamily D3H41_21525 IPR001451 Hexapeptide repeat D3H41_21530 IPR015946 K homology domain-like, alpha/beta D3H41_21530 IPR003718 OsmC/Ohr family D3H41_21530 IPR036102 OsmC/Ohr superfamily D3H41_21575 IPR036102 OsmC/Ohr superfamily D3H41_21575 IPR003718 OsmC/Ohr family D3H41_21575 IPR015946 K homology domain-like, alpha/beta D3H41_21580 IPR028427 Peptide methionine sulfoxide reductase D3H41_21580 IPR002569 Peptide methionine sulphoxide reductase MsrA D3H41_21580 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily D3H41_21580 IPR011057 Mss4-like superfamily D3H41_21580 IPR002579 Peptide methionine sulphoxide reductase MrsB D3H41_21595 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily D3H41_21595 IPR007357 Deoxyribodipyrimidine photolyase-related protein D3H41_21595 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3H41_21600 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily D3H41_21600 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain D3H41_21600 IPR002081 Cryptochrome/DNA photolyase class 1 D3H41_21600 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily D3H41_21600 IPR006050 DNA photolyase, N-terminal D3H41_21600 IPR014133 Cryptochrome DASH D3H41_21600 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3H41_21605 IPR000160 GGDEF domain D3H41_21605 IPR029787 Nucleotide cyclase D3H41_21620 IPR029787 Nucleotide cyclase D3H41_21620 IPR007894 MASE2 D3H41_21620 IPR000160 GGDEF domain D3H41_21635 IPR008276 Concentrative nucleoside transporter D3H41_21635 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain D3H41_21635 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial D3H41_21635 IPR002668 Concentrative nucleoside transporter N-terminal domain D3H41_21635 IPR011657 Concentrative nucleoside transporter C-terminal domain D3H41_21655 IPR018176 Tryptophanase, conserved site D3H41_21655 IPR013440 Tryptophanase D3H41_21655 IPR015421 Pyridoxal phosphate-dependent transferase, major domain D3H41_21655 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 D3H41_21655 IPR015424 Pyridoxal phosphate-dependent transferase D3H41_21655 IPR011166 Beta-eliminating lyase family D3H41_21655 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase D3H41_21660 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B D3H41_21660 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD D3H41_21665 IPR002585 Cytochrome ubiquinol oxidase subunit 1 D3H41_21670 IPR003317 Cytochrome ubiquinol oxidase subunit 2 D3H41_21690 IPR007344 GrpB/Dephospho-CoA kinase D3H41_21695 IPR006076 FAD dependent oxidoreductase D3H41_21695 IPR036188 FAD/NAD(P)-binding domain superfamily D3H41_21695 IPR030862 L-2-hydroxyglutarate dehydrogenase D3H41_21715 IPR004685 Branched-chain amino acid transport system II carrier protein D3H41_21720 IPR029787 Nucleotide cyclase D3H41_21720 IPR000160 GGDEF domain D3H41_21725 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 D3H41_21725 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 D3H41_21725 IPR002078 RNA polymerase sigma factor 54 interaction domain D3H41_21725 IPR001789 Signal transduction response regulator, receiver domain D3H41_21725 IPR025944 Sigma-54 interaction domain, conserved site D3H41_21725 IPR003593 AAA+ ATPase domain D3H41_21725 IPR011006 CheY-like superfamily D3H41_21725 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_21725 IPR009057 Homeobox-like domain superfamily D3H41_21725 IPR002197 DNA binding HTH domain, Fis-type D3H41_21730 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) D3H41_21730 IPR033479 Double Cache domain 1 D3H41_21730 IPR003594 Histidine kinase/HSP90-like ATPase D3H41_21730 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3H41_21730 IPR005467 Histidine kinase domain D3H41_21730 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain D3H41_21730 IPR029151 Periplasmic sensor-like domain superfamily D3H41_21730 IPR004358 Signal transduction histidine kinase-related protein, C-terminal D3H41_21730 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily D3H41_21735 IPR018120 Glycoside hydrolase family 1, active site D3H41_21735 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site D3H41_21735 IPR017853 Glycoside hydrolase superfamily D3H41_21735 IPR001360 Glycoside hydrolase family 1 D3H41_21750 IPR000847 Transcription regulator HTH, LysR D3H41_21750 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_21750 IPR005119 LysR, substrate-binding D3H41_21750 IPR036390 Winged helix DNA-binding domain superfamily D3H41_21760 IPR001279 Metallo-beta-lactamase D3H41_21760 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like D3H41_21760 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D D3H41_21775 IPR041107 RimK, PreATP-grasp domain D3H41_21775 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK D3H41_21775 IPR013815 ATP-grasp fold, subdomain 1 D3H41_21775 IPR013651 ATP-grasp fold, RimK-type D3H41_21775 IPR011761 ATP-grasp fold D3H41_21775 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX D3H41_21780 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX D3H41_21780 IPR011761 ATP-grasp fold D3H41_21780 IPR041107 RimK, PreATP-grasp domain D3H41_21780 IPR013815 ATP-grasp fold, subdomain 1 D3H41_21780 IPR021109 Aspartic peptidase domain superfamily D3H41_21780 IPR013651 ATP-grasp fold, RimK-type D3H41_21780 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK D3H41_21785 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like D3H41_21785 IPR001279 Metallo-beta-lactamase D3H41_21785 IPR001018 Beta-lactamase, class-B, conserved site D3H41_21790 IPR029066 PLP-binding barrel D3H41_21790 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal D3H41_21790 IPR040634 Arginine decarboxylase, helical bundle domain D3H41_21790 IPR041128 Arginine decarboxylase, C-terminal helical D3H41_21790 IPR000183 Ornithine/DAP/Arg decarboxylase D3H41_21790 IPR002985 Arginine decarboxylase D3H41_21790 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal D3H41_21795 IPR020855 Ureohydrolase, manganese-binding site D3H41_21795 IPR023694 Agmatinase D3H41_21795 IPR023696 Ureohydrolase domain superfamily D3H41_21795 IPR006035 Ureohydrolase D3H41_21795 IPR005925 Agmatinase-related D3H41_21800 IPR004734 Multidrug resistance protein D3H41_21800 IPR011701 Major facilitator superfamily D3H41_21800 IPR020846 Major facilitator superfamily domain D3H41_21800 IPR036259 MFS transporter superfamily D3H41_21805 IPR002470 Peptidase S9A, prolyl oligopeptidase D3H41_21805 IPR002471 Peptidase S9, serine active site D3H41_21805 IPR023302 Peptidase S9A, N-terminal domain D3H41_21805 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain D3H41_21805 IPR029058 Alpha/Beta hydrolase fold D3H41_21820 IPR037294 ABC transporter, BtuC-like D3H41_21820 IPR001626 ABC transporter, TroCD-like D3H41_21825 IPR003593 AAA+ ATPase domain D3H41_21825 IPR003439 ABC transporter-like D3H41_21825 IPR017871 ABC transporter, conserved site D3H41_21825 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_21830 IPR006128 Adhesion lipoprotein D3H41_21830 IPR006129 Adhesin B D3H41_21830 IPR006127 Periplasmic solute binding protein, ZnuA-like D3H41_21875 IPR003400 Biopolymer transport protein ExbD/TolR D3H41_21880 IPR002898 MotA/TolQ/ExbB proton channel D3H41_21885 IPR002898 MotA/TolQ/ExbB proton channel D3H41_21895 IPR010105 TonB-dependent siderophore receptor D3H41_21895 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D3H41_21895 IPR000531 TonB-dependent receptor-like, beta-barrel D3H41_21895 IPR039423 TonB-dependent receptor-like D3H41_21895 IPR037066 TonB-dependent receptor, plug domain superfamily D3H41_21895 IPR012910 TonB-dependent receptor, plug domain D3H41_21900 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain D3H41_21900 IPR031930 2-component histidine kinase, sensor domain D3H41_21900 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily D3H41_21900 IPR003660 HAMP domain D3H41_21900 IPR004358 Signal transduction histidine kinase-related protein, C-terminal D3H41_21900 IPR003594 Histidine kinase/HSP90-like ATPase D3H41_21900 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3H41_21900 IPR005467 Histidine kinase domain D3H41_21900 IPR038428 2-component histidine kinase, sensor domain superfamily D3H41_21905 IPR011006 CheY-like superfamily D3H41_21905 IPR001867 OmpR/PhoB-type DNA-binding domain D3H41_21905 IPR001789 Signal transduction response regulator, receiver domain D3H41_21905 IPR039420 Transcriptional regulatory protein WalR-like D3H41_21905 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_21905 IPR016032 Signal transduction response regulator, C-terminal effector D3H41_21910 IPR030395 Glycerophosphodiester phosphodiesterase domain D3H41_21910 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily D3H41_21920 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D3H41_21920 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site D3H41_21920 IPR036291 NAD(P)-binding domain superfamily D3H41_21920 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain D3H41_21920 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 D3H41_21925 IPR021230 Protein of unknown function DUF2810 D3H41_21980 IPR029028 Alpha/beta knot methyltransferases D3H41_21980 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal D3H41_21980 IPR007158 tRNA (pseudouridine(54)-N(1))-methyltransferase, TrmY D3H41_21985 IPR035068 Metalloprotease TldD/PmbA, N-terminal D3H41_21985 IPR002510 Metalloprotease TldD/PmbA D3H41_21985 IPR025502 TldD D3H41_21985 IPR036059 Metalloprotease TldD/PmbA superfamily D3H41_21990 IPR002510 Metalloprotease TldD/PmbA D3H41_21990 IPR035068 Metalloprotease TldD/PmbA, N-terminal D3H41_21990 IPR036059 Metalloprotease TldD/PmbA superfamily D3H41_21995 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase D3H41_21995 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase D3H41_21995 IPR029056 Ribokinase-like D3H41_22000 IPR003593 AAA+ ATPase domain D3H41_22000 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_22000 IPR003439 ABC transporter-like D3H41_22000 IPR017871 ABC transporter, conserved site D3H41_22005 IPR000515 ABC transporter type 1, transmembrane domain MetI-like D3H41_22005 IPR035906 MetI-like superfamily D3H41_22010 IPR015168 SsuA/THI5-like D3H41_22010 IPR027939 NMT1/THI5 family D3H41_22015 IPR027574 Thiaminase II D3H41_22015 IPR004305 Thiaminase-2/PQQC D3H41_22015 IPR016084 Haem oxygenase-like, multi-helical D3H41_22020 IPR029056 Ribokinase-like D3H41_22020 IPR000417 Hydroxyethylthiazole kinase D3H41_22025 IPR022998 Thiamine phosphate synthase/TenI D3H41_22025 IPR036206 Thiamin phosphate synthase superfamily D3H41_22025 IPR013785 Aldolase-type TIM barrel D3H41_22025 IPR034291 Thiamine phosphate synthase D3H41_22035 IPR041460 Molybdopterin oxidoreductase, N-terminal D3H41_22035 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site D3H41_22035 IPR006656 Molybdopterin oxidoreductase D3H41_22035 IPR041954 Trimethylamine-N-oxide reductase-like, molybdopterin-binding domain D3H41_22035 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase D3H41_22035 IPR006657 Molybdopterin dinucleotide-binding domain D3H41_22035 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal D3H41_22035 IPR006311 Twin-arginine translocation pathway, signal sequence D3H41_22035 IPR009010 Aspartate decarboxylase-like domain superfamily D3H41_22040 IPR036280 Multiheme cytochrome superfamily D3H41_22040 IPR011031 Multihaem cytochrome D3H41_22040 IPR005126 NapC/NirT cytochrome c, N-terminal D3H41_22040 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK D3H41_22040 IPR038266 NapC/NirT cytochrome c superfamily D3H41_22045 IPR000182 GNAT domain D3H41_22045 IPR016181 Acyl-CoA N-acyltransferase D3H41_22050 IPR036291 NAD(P)-binding domain superfamily D3H41_22050 IPR020904 Short-chain dehydrogenase/reductase, conserved site D3H41_22050 IPR002347 Short-chain dehydrogenase/reductase SDR D3H41_22065 IPR027455 Spermine/spermidine acetyltransferase, N-terminal D3H41_22065 IPR000182 GNAT domain D3H41_22065 IPR016181 Acyl-CoA N-acyltransferase D3H41_22085 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_22085 IPR036390 Winged helix DNA-binding domain superfamily D3H41_22085 IPR000524 Transcription regulator HTH, GntR D3H41_22085 IPR004839 Aminotransferase, class I/classII D3H41_22085 IPR015424 Pyridoxal phosphate-dependent transferase D3H41_22085 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 D3H41_22085 IPR015421 Pyridoxal phosphate-dependent transferase, major domain D3H41_22090 IPR004381 Glycerate kinase D3H41_22090 IPR036129 Glycerate kinase superfamily D3H41_22090 IPR018197 Glycerate kinase, restriction-enzyme-like fold D3H41_22090 IPR018193 Glycerate kinase, flavodoxin-like fold D3H41_22095 IPR003474 Gluconate transporter D3H41_22100 IPR025736 PucR C-terminal helix-turn-helix domain D3H41_22100 IPR008599 Putative sugar diacid recognition D3H41_22100 IPR042070 PucR C-terminal helix-turn-helix domain superfamily D3H41_22100 IPR041522 CdaR, GGDEF-like domain D3H41_22135 IPR037523 Vicinal oxygen chelate (VOC) domain D3H41_22135 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D3H41_22135 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain D3H41_22140 IPR001279 Metallo-beta-lactamase D3H41_22140 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D D3H41_22140 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like D3H41_22150 IPR011701 Major facilitator superfamily D3H41_22150 IPR020846 Major facilitator superfamily domain D3H41_22150 IPR004638 Drug resistance transporter EmrB-like D3H41_22150 IPR036259 MFS transporter superfamily D3H41_22155 IPR039562 Membrane fusion protein, biotin-lipoyl like domain D3H41_22160 IPR005618 Outer membrane protein, OmpW D3H41_22160 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel D3H41_22165 IPR001646 Pentapeptide repeat D3H41_22185 IPR036390 Winged helix DNA-binding domain superfamily D3H41_22185 IPR011008 Dimeric alpha-beta barrel D3H41_22185 IPR011991 ArsR-like helix-turn-helix domain D3H41_22185 IPR000485 AsnC-type HTH domain D3H41_22185 IPR019888 Transcription regulator AsnC-type D3H41_22185 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_22185 IPR019885 Transcription regulator HTH, AsnC-type, conserved site D3H41_22185 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain D3H41_22190 IPR001123 Amino acid exporter protein, LeuE-type D3H41_22195 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain D3H41_22195 IPR007037 Siderophore-interacting protein, C-terminal domain D3H41_22195 IPR039374 Siderophore-interacting protein D3H41_22195 IPR017927 FAD-binding domain, ferredoxin reductase-type D3H41_22195 IPR013113 FAD-binding 9, siderophore-interacting D3H41_22195 IPR017938 Riboflavin synthase-like beta-barrel D3H41_22200 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_22200 IPR036390 Winged helix DNA-binding domain superfamily D3H41_22200 IPR000847 Transcription regulator HTH, LysR D3H41_22200 IPR005119 LysR, substrate-binding D3H41_22205 IPR001447 Arylamine N-acetyltransferase D3H41_22205 IPR038765 Papain-like cysteine peptidase superfamily D3H41_22210 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site D3H41_22210 IPR036291 NAD(P)-binding domain superfamily D3H41_22210 IPR013154 Alcohol dehydrogenase, N-terminal D3H41_22210 IPR013149 Alcohol dehydrogenase, C-terminal D3H41_22210 IPR020843 Polyketide synthase, enoylreductase domain D3H41_22210 IPR014183 Alcohol dehydrogenase class III D3H41_22210 IPR011032 GroES-like superfamily D3H41_22215 IPR014186 S-formylglutathione hydrolase D3H41_22215 IPR000801 Putative esterase D3H41_22215 IPR029058 Alpha/Beta hydrolase fold D3H41_22225 IPR003660 HAMP domain D3H41_22225 IPR029787 Nucleotide cyclase D3H41_22225 IPR033417 Periplasmic sensor domain CHASE8 D3H41_22225 IPR000160 GGDEF domain D3H41_22235 IPR036412 HAD-like superfamily D3H41_22235 IPR000150 Cof family D3H41_22235 IPR006379 HAD-superfamily hydrolase, subfamily IIB D3H41_22235 IPR023214 HAD superfamily D3H41_22240 IPR000847 Transcription regulator HTH, LysR D3H41_22240 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_22240 IPR005119 LysR, substrate-binding D3H41_22240 IPR036390 Winged helix DNA-binding domain superfamily D3H41_22255 IPR006225 Pseudouridine synthase, RluC/RluD D3H41_22255 IPR020103 Pseudouridine synthase, catalytic domain superfamily D3H41_22255 IPR006145 Pseudouridine synthase, RsuA/RluA D3H41_22255 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site D3H41_22260 IPR002528 Multi antimicrobial extrusion protein D3H41_22265 IPR001633 EAL domain D3H41_22265 IPR029787 Nucleotide cyclase D3H41_22265 IPR003660 HAMP domain D3H41_22265 IPR000160 GGDEF domain D3H41_22265 IPR035919 EAL domain superfamily D3H41_22275 IPR011051 RmlC-like cupin domain superfamily D3H41_22275 IPR014710 RmlC-like jelly roll fold D3H41_22275 IPR009664 Pyrimidine/purine nucleoside phosphorylase D3H41_22285 IPR001223 Glycoside hydrolase family 18, catalytic domain D3H41_22285 IPR036573 Carbohydrate-binding module superfamily 5/12 D3H41_22285 IPR003610 Carbohydrate-binding module family 5/12 D3H41_22285 IPR029070 Chitinase insertion domain superfamily D3H41_22285 IPR014756 Immunoglobulin E-set D3H41_22285 IPR011583 Chitinase II D3H41_22285 IPR013540 Chitinase A N-terminal D3H41_22285 IPR001579 Glycoside hydrolase, chitinase active site D3H41_22285 IPR002126 Cadherin-like D3H41_22285 IPR013783 Immunoglobulin-like fold D3H41_22285 IPR022409 PKD/Chitinase domain D3H41_22285 IPR017853 Glycoside hydrolase superfamily D3H41_22290 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase D3H41_22290 IPR029058 Alpha/Beta hydrolase fold D3H41_22290 IPR000073 Alpha/beta hydrolase fold-1 D3H41_22305 IPR004680 Citrate transporter-like domain D3H41_22305 IPR004672 Na+/H+ antiporter NhaD D3H41_22315 IPR003740 Uncharacterised membrane protein YitT D3H41_22325 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site D3H41_22325 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding D3H41_22325 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_22325 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain D3H41_22325 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain D3H41_22325 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily D3H41_22325 IPR023546 Methylated-DNA--protein-cysteine methyltransferase D3H41_22330 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding D3H41_22330 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_22330 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily D3H41_22330 IPR009057 Homeobox-like domain superfamily D3H41_22330 IPR016221 Bifunctional regulatory protein Ada D3H41_22330 IPR018060 DNA binding HTH domain, AraC-type D3H41_22330 IPR018062 HTH domain AraC-type, conserved site D3H41_22330 IPR004026 Ada DNA repair, metal-binding D3H41_22330 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain D3H41_22330 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain D3H41_22330 IPR035451 Ada-like domain superfamily D3H41_22330 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site D3H41_22340 IPR032808 DoxX family D3H41_22345 IPR012093 Pirin D3H41_22345 IPR003829 Pirin, N-terminal domain D3H41_22345 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain D3H41_22345 IPR014710 RmlC-like jelly roll fold D3H41_22345 IPR011051 RmlC-like cupin domain superfamily D3H41_22350 IPR036390 Winged helix DNA-binding domain superfamily D3H41_22350 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_22350 IPR020890 Transcription regulator HTH, HdfR D3H41_22350 IPR000847 Transcription regulator HTH, LysR D3H41_22350 IPR005119 LysR, substrate-binding D3H41_22365 IPR037171 NagB/RpiA transferase-like D3H41_22365 IPR004547 Glucosamine-6-phosphate isomerase D3H41_22365 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase D3H41_22365 IPR018321 Glucosamine-6-phosphate isomerase, conserved site D3H41_22375 IPR004445 Sodium/glutamate symport carrier protein GltS D3H41_22380 IPR036390 Winged helix DNA-binding domain superfamily D3H41_22380 IPR015424 Pyridoxal phosphate-dependent transferase D3H41_22380 IPR015421 Pyridoxal phosphate-dependent transferase, major domain D3H41_22380 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 D3H41_22380 IPR004839 Aminotransferase, class I/classII D3H41_22380 IPR000524 Transcription regulator HTH, GntR D3H41_22380 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_22385 IPR003593 AAA+ ATPase domain D3H41_22385 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_22385 IPR003439 ABC transporter-like D3H41_22395 IPR004445 Sodium/glutamate symport carrier protein GltS D3H41_22415 IPR000727 Target SNARE coiled-coil homology domain D3H41_22415 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain D3H41_22415 IPR033480 Single Cache domain 2 D3H41_22415 IPR003660 HAMP domain D3H41_22415 IPR004090 Chemotaxis methyl-accepting receptor D3H41_22420 IPR029000 Cyclophilin-like domain superfamily D3H41_22420 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase D3H41_22420 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain D3H41_22420 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site D3H41_22425 IPR011006 CheY-like superfamily D3H41_22425 IPR001789 Signal transduction response regulator, receiver domain D3H41_22425 IPR007492 LytTR DNA-binding domain D3H41_22430 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3H41_22430 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region D3H41_22430 IPR003018 GAF domain D3H41_22430 IPR010559 Signal transduction histidine kinase, internal region D3H41_22430 IPR003594 Histidine kinase/HSP90-like ATPase D3H41_22450 IPR011924 Lipoprotein releasing system, ATP-binding protein D3H41_22450 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_22450 IPR003593 AAA+ ATPase domain D3H41_22450 IPR003439 ABC transporter-like D3H41_22450 IPR015854 ABC transporter, lipoprotein release, LolD D3H41_22450 IPR017871 ABC transporter, conserved site D3H41_22460 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB D3H41_22460 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site D3H41_22460 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA D3H41_22465 IPR029072 YebC-like D3H41_22465 IPR017856 Integrase-like, N-terminal D3H41_22465 IPR002876 Transcriptional regulator TACO1-like D3H41_22465 IPR026564 Transcriptional regulator TACO1-like, domain 3 D3H41_22475 IPR003660 HAMP domain D3H41_22475 IPR011006 CheY-like superfamily D3H41_22475 IPR033414 Periplasmic sensor domain D3H41_22475 IPR004358 Signal transduction histidine kinase-related protein, C-terminal D3H41_22475 IPR003594 Histidine kinase/HSP90-like ATPase D3H41_22475 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3H41_22475 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain D3H41_22475 IPR001789 Signal transduction response regulator, receiver domain D3H41_22475 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily D3H41_22475 IPR005467 Histidine kinase domain D3H41_22475 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain D3H41_22475 IPR036641 HPT domain superfamily D3H41_22485 IPR012816 NADAR D3H41_22485 IPR036144 RibA-like superfamily D3H41_22485 IPR000926 GTP cyclohydrolase II, RibA D3H41_22485 IPR032677 GTP cyclohydrolase II D3H41_22485 IPR037238 YbiA-like superfamily D3H41_22495 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal D3H41_22495 IPR003593 AAA+ ATPase domain D3H41_22495 IPR003439 ABC transporter-like D3H41_22495 IPR017871 ABC transporter, conserved site D3H41_22495 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_22500 IPR017871 ABC transporter, conserved site D3H41_22500 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_22500 IPR003439 ABC transporter-like D3H41_22500 IPR003593 AAA+ ATPase domain D3H41_22500 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal D3H41_22515 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_22515 IPR041250 ParA helix turn helix domain D3H41_22515 IPR025669 AAA domain D3H41_22520 IPR003115 ParB/Sulfiredoxin D3H41_22520 IPR014884 ParB protein family, C-terminal D3H41_22520 IPR004437 ParB/RepB/Spo0J partition protein D3H41_22525 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_22525 IPR032672 TmcA/NAT10/Kre33 D3H41_22525 IPR000182 GNAT domain D3H41_22525 IPR016181 Acyl-CoA N-acyltransferase D3H41_22525 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA D3H41_22525 IPR007807 Helicase domain D3H41_22535 IPR001451 Hexapeptide repeat D3H41_22535 IPR011004 Trimeric LpxA-like superfamily D3H41_22535 IPR018357 Hexapeptide transferase, conserved site D3H41_22540 IPR036390 Winged helix DNA-binding domain superfamily D3H41_22540 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_22540 IPR005119 LysR, substrate-binding D3H41_22540 IPR000847 Transcription regulator HTH, LysR D3H41_22545 IPR005320 Peptidase S51 D3H41_22545 IPR029062 Class I glutamine amidotransferase-like D3H41_22550 IPR001702 Porin, Gram-negative type D3H41_22550 IPR001897 Porin, gammaproteobacterial D3H41_22550 IPR023614 Porin domain superfamily D3H41_22550 IPR033900 Porin domain, Gram-negative type D3H41_22550 IPR013793 Porin, Gram-negative type, conserved site D3H41_22555 IPR036878 Glucose permease domain IIB D3H41_22555 IPR013013 Phosphotransferase system, EIIC component, type 1 D3H41_22555 IPR003352 Phosphotransferase system, EIIC D3H41_22555 IPR001996 Phosphotransferase system, IIB component, type 1 D3H41_22555 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site D3H41_22560 IPR005486 Glucokinase regulatory protein, conserved site D3H41_22560 IPR001347 Sugar isomerase (SIS) D3H41_22560 IPR040190 N-acetylmuramic acid 6-phosphate etherase/glucokinase regulatory protein D3H41_22560 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ D3H41_22570 IPR009057 Homeobox-like domain superfamily D3H41_22570 IPR000281 Helix-turn-helix protein RpiR D3H41_22570 IPR035472 RpiR-like, SIS domain D3H41_22570 IPR001347 Sugar isomerase (SIS) D3H41_22570 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_22575 IPR000834 Peptidase M14, carboxypeptidase A D3H41_22580 IPR039424 Solute-binding protein family 5 D3H41_22580 IPR023765 Solute-binding protein family 5, conserved site D3H41_22580 IPR000914 Solute-binding protein family 5 domain D3H41_22580 IPR030678 Peptide/nickel binding protein, MppA-type D3H41_22585 IPR029039 Flavoprotein-like superfamily D3H41_22585 IPR008254 Flavodoxin/nitric oxide synthase D3H41_22585 IPR005025 NADPH-dependent FMN reductase-like D3H41_22585 IPR010089 Flavoprotein WrbA-like D3H41_22585 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic D3H41_22595 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_22595 IPR005074 Peptidase C39, bacteriocin processing D3H41_22595 IPR039395 Peptidase C39-like A D3H41_22595 IPR039421 Type I protein exporter D3H41_22595 IPR010132 ATPase, type I secretion system, HlyB D3H41_22595 IPR017871 ABC transporter, conserved site D3H41_22595 IPR003439 ABC transporter-like D3H41_22595 IPR003593 AAA+ ATPase domain D3H41_22595 IPR036640 ABC transporter type 1, transmembrane domain superfamily D3H41_22595 IPR011527 ABC transporter type 1, transmembrane domain D3H41_22610 IPR010129 Type I secretion membrane fusion protein, HlyD family D3H41_22610 IPR006144 Secretion protein HlyD, conserved site D3H41_22615 IPR025944 Sigma-54 interaction domain, conserved site D3H41_22615 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 D3H41_22615 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 D3H41_22615 IPR002078 RNA polymerase sigma factor 54 interaction domain D3H41_22615 IPR001789 Signal transduction response regulator, receiver domain D3H41_22615 IPR003593 AAA+ ATPase domain D3H41_22615 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_22615 IPR011006 CheY-like superfamily D3H41_22615 IPR002197 DNA binding HTH domain, Fis-type D3H41_22615 IPR009057 Homeobox-like domain superfamily D3H41_22620 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain D3H41_22620 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3H41_22620 IPR003594 Histidine kinase/HSP90-like ATPase D3H41_22620 IPR033479 Double Cache domain 1 D3H41_22620 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) D3H41_22620 IPR004358 Signal transduction histidine kinase-related protein, C-terminal D3H41_22620 IPR029151 Periplasmic sensor-like domain superfamily D3H41_22620 IPR005467 Histidine kinase domain D3H41_22620 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily D3H41_22625 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site D3H41_22625 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative D3H41_22625 IPR012349 FMN-binding split barrel D3H41_22625 IPR000659 Pyridoxamine 5'-phosphate oxidase D3H41_22625 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal D3H41_22635 IPR018062 HTH domain AraC-type, conserved site D3H41_22635 IPR014710 RmlC-like jelly roll fold D3H41_22635 IPR011051 RmlC-like cupin domain superfamily D3H41_22635 IPR020449 Transcription regulator HTH, AraC- type D3H41_22635 IPR018060 DNA binding HTH domain, AraC-type D3H41_22635 IPR009057 Homeobox-like domain superfamily D3H41_22640 IPR029041 FAD-linked oxidoreductase-like D3H41_22640 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain D3H41_22640 IPR002872 Proline dehydrogenase domain D3H41_22640 IPR016162 Aldehyde dehydrogenase, N-terminal D3H41_22640 IPR010985 Ribbon-helix-helix D3H41_22640 IPR016160 Aldehyde dehydrogenase, cysteine active site D3H41_22640 IPR016163 Aldehyde dehydrogenase, C-terminal D3H41_22640 IPR016161 Aldehyde/histidinol dehydrogenase D3H41_22640 IPR029510 Aldehyde dehydrogenase, glutamic acid active site D3H41_22640 IPR024082 Proline dehydrogenase PutA, domain II D3H41_22640 IPR024090 Proline dehydrogenase PutA, domain I D3H41_22640 IPR015590 Aldehyde dehydrogenase domain D3H41_22640 IPR013321 Arc-type ribbon-helix-helix D3H41_22640 IPR025703 Bifunctional protein PutA D3H41_22640 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 D3H41_22640 IPR024089 Proline dehydrogenase PutA, domain I/II D3H41_22650 IPR011851 Sodium/proline symporter D3H41_22650 IPR038377 Sodium/glucose symporter superfamily D3H41_22650 IPR001734 Sodium/solute symporter D3H41_22650 IPR018212 Sodium/solute symporter, conserved site D3H41_22680 IPR036390 Winged helix DNA-binding domain superfamily D3H41_22680 IPR000485 AsnC-type HTH domain D3H41_22680 IPR011008 Dimeric alpha-beta barrel D3H41_22680 IPR019888 Transcription regulator AsnC-type D3H41_22680 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain D3H41_22680 IPR019885 Transcription regulator HTH, AsnC-type, conserved site D3H41_22680 IPR011991 ArsR-like helix-turn-helix domain D3H41_22680 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_22690 IPR039421 Type I protein exporter D3H41_22690 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_22690 IPR017871 ABC transporter, conserved site D3H41_22690 IPR003593 AAA+ ATPase domain D3H41_22690 IPR011527 ABC transporter type 1, transmembrane domain D3H41_22690 IPR003439 ABC transporter-like D3H41_22690 IPR036640 ABC transporter type 1, transmembrane domain superfamily D3H41_22700 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site D3H41_22700 IPR014014 RNA helicase, DEAD-box type, Q motif D3H41_22700 IPR014001 Helicase superfamily 1/2, ATP-binding domain D3H41_22700 IPR011545 DEAD/DEAH box helicase domain D3H41_22700 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_22700 IPR028622 ATP-dependent RNA helicase RhlE D3H41_22700 IPR001650 Helicase, C-terminal D3H41_22705 IPR011037 Pyruvate kinase-like, insert domain superfamily D3H41_22705 IPR005302 Molybdenum cofactor sulfurase, C-terminal D3H41_22705 IPR005163 3-alpha domain D3H41_22725 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 D3H41_22725 IPR013325 RNA polymerase sigma factor, region 2 D3H41_22725 IPR013324 RNA polymerase sigma factor, region 3/4-like D3H41_22725 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_22725 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site D3H41_22725 IPR007627 RNA polymerase sigma-70 region 2 D3H41_22725 IPR039425 RNA polymerase sigma-70 like D3H41_22725 IPR014284 RNA polymerase sigma-70 like domain D3H41_22730 IPR018062 HTH domain AraC-type, conserved site D3H41_22730 IPR002818 DJ-1/PfpI D3H41_22730 IPR018060 DNA binding HTH domain, AraC-type D3H41_22730 IPR029062 Class I glutamine amidotransferase-like D3H41_22730 IPR009057 Homeobox-like domain superfamily D3H41_22740 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_22740 IPR036390 Winged helix DNA-binding domain superfamily D3H41_22740 IPR005119 LysR, substrate-binding D3H41_22740 IPR000847 Transcription regulator HTH, LysR D3H41_22770 IPR023753 FAD/NAD(P)-binding domain D3H41_22770 IPR012081 Alkyl hydroperoxide reductase subunit F D3H41_22770 IPR036249 Thioredoxin-like superfamily D3H41_22770 IPR002109 Glutaredoxin D3H41_22770 IPR036188 FAD/NAD(P)-binding domain superfamily D3H41_22770 IPR012336 Thioredoxin-like fold D3H41_22770 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site D3H41_22775 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant D3H41_22775 IPR017559 Alkyl hydroperoxide reductase subunit C D3H41_22775 IPR024706 Peroxiredoxin, AhpC-type D3H41_22775 IPR036249 Thioredoxin-like superfamily D3H41_22775 IPR013766 Thioredoxin domain D3H41_22775 IPR019479 Peroxiredoxin, C-terminal D3H41_22780 IPR000835 MarR-type HTH domain D3H41_22780 IPR036390 Winged helix DNA-binding domain superfamily D3H41_22780 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_22785 IPR015946 K homology domain-like, alpha/beta D3H41_22785 IPR019953 Organic hydroperoxide resistance protein famiy D3H41_22785 IPR003718 OsmC/Ohr family D3H41_22785 IPR036102 OsmC/Ohr superfamily D3H41_22820 IPR003593 AAA+ ATPase domain D3H41_22820 IPR003439 ABC transporter-like D3H41_22820 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_22835 IPR029044 Nucleotide-diphospho-sugar transferases D3H41_22835 IPR001173 Glycosyltransferase 2-like D3H41_22845 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3H41_22845 IPR013216 Methyltransferase type 11 D3H41_22845 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC D3H41_22865 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component D3H41_22865 IPR001996 Phosphotransferase system, IIB component, type 1 D3H41_22865 IPR013013 Phosphotransferase system, EIIC component, type 1 D3H41_22865 IPR003352 Phosphotransferase system, EIIC D3H41_22865 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site D3H41_22865 IPR036878 Glucose permease domain IIB D3H41_22865 IPR011299 PTS system glucose-specific IIBC component D3H41_22875 IPR039420 Transcriptional regulatory protein WalR-like D3H41_22875 IPR011006 CheY-like superfamily D3H41_22875 IPR016032 Signal transduction response regulator, C-terminal effector D3H41_22875 IPR001789 Signal transduction response regulator, receiver domain D3H41_22875 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_22875 IPR001867 OmpR/PhoB-type DNA-binding domain D3H41_22880 IPR013727 Two-component sensor kinase, N-terminal D3H41_22880 IPR003660 HAMP domain D3H41_22880 IPR003594 Histidine kinase/HSP90-like ATPase D3H41_22880 IPR005467 Histidine kinase domain D3H41_22880 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain D3H41_22880 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily D3H41_22880 IPR004358 Signal transduction histidine kinase-related protein, C-terminal D3H41_22880 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3H41_22885 IPR006059 Bacterial extracellular solute-binding protein D3H41_22890 IPR002433 Ornithine decarboxylase D3H41_22890 IPR029066 PLP-binding barrel D3H41_22890 IPR022272 Lipocalin family conserved site D3H41_22890 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal D3H41_22890 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal D3H41_22890 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal D3H41_22890 IPR000183 Ornithine/DAP/Arg decarboxylase D3H41_22895 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like D3H41_22895 IPR022770 Ferric iron reductase FhuF domain D3H41_22895 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal D3H41_22905 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal D3H41_22905 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like D3H41_22905 IPR022770 Ferric iron reductase FhuF domain D3H41_22910 IPR003806 ATP-grasp fold, PylC-type D3H41_22910 IPR022761 Fumarate lyase, N-terminal D3H41_22910 IPR009049 Argininosuccinate lyase D3H41_22910 IPR008948 L-Aspartase-like D3H41_22910 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain D3H41_22910 IPR024083 Fumarase/histidase, N-terminal D3H41_22910 IPR011761 ATP-grasp fold D3H41_22910 IPR000362 Fumarate lyase family D3H41_22915 IPR000531 TonB-dependent receptor-like, beta-barrel D3H41_22915 IPR037066 TonB-dependent receptor, plug domain superfamily D3H41_22915 IPR012910 TonB-dependent receptor, plug domain D3H41_22915 IPR039423 TonB-dependent receptor-like D3H41_22915 IPR010105 TonB-dependent siderophore receptor D3H41_22915 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D3H41_22920 IPR010916 TonB box, conserved site D3H41_22920 IPR011662 Secretin/TonB, short N-terminal domain D3H41_22920 IPR000531 TonB-dependent receptor-like, beta-barrel D3H41_22920 IPR037066 TonB-dependent receptor, plug domain superfamily D3H41_22920 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D3H41_22920 IPR012910 TonB-dependent receptor, plug domain D3H41_22920 IPR010105 TonB-dependent siderophore receptor D3H41_22920 IPR010917 TonB-dependent receptor, conserved site D3H41_22925 IPR002491 ABC transporter periplasmic binding domain D3H41_22930 IPR000522 ABC transporter, permease protein, BtuC-like D3H41_22930 IPR037294 ABC transporter, BtuC-like D3H41_22935 IPR037294 ABC transporter, BtuC-like D3H41_22935 IPR000522 ABC transporter, permease protein, BtuC-like D3H41_22940 IPR003593 AAA+ ATPase domain D3H41_22940 IPR003439 ABC transporter-like D3H41_22940 IPR017871 ABC transporter, conserved site D3H41_22940 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_22945 IPR004090 Chemotaxis methyl-accepting receptor D3H41_22945 IPR003660 HAMP domain D3H41_22945 IPR033480 Single Cache domain 2 D3H41_22945 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain D3H41_22950 IPR011765 Peptidase M16, N-terminal D3H41_22950 IPR001431 Peptidase M16, zinc-binding site D3H41_22950 IPR007863 Peptidase M16, C-terminal D3H41_22950 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like D3H41_22960 IPR011055 Duplicated hybrid motif D3H41_22960 IPR007340 Opacity-associated protein A D3H41_22960 IPR016047 Peptidase M23 D3H41_22975 IPR011701 Major facilitator superfamily D3H41_22975 IPR036259 MFS transporter superfamily D3H41_22975 IPR004734 Multidrug resistance protein D3H41_22975 IPR020846 Major facilitator superfamily domain D3H41_22980 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily D3H41_22980 IPR006120 Resolvase, HTH domain D3H41_22980 IPR006118 Recombinase, conserved site D3H41_22980 IPR006119 Resolvase, N-terminal catalytic domain D3H41_22980 IPR009057 Homeobox-like domain superfamily D3H41_22985 IPR028082 Periplasmic binding protein-like I D3H41_22985 IPR023588 Transcription regulator HTH, PurR D3H41_22985 IPR010982 Lambda repressor-like, DNA-binding domain superfamily D3H41_22985 IPR000843 LacI-type HTH domain D3H41_22990 IPR001734 Sodium/solute symporter D3H41_22990 IPR038377 Sodium/glucose symporter superfamily D3H41_23005 IPR004681 TRAP transporter large membrane protein DctM D3H41_23005 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit D3H41_23015 IPR004682 TRAP transporter solute receptor, DctP family D3H41_23015 IPR018389 TRAP transporter solute receptor DctP/TeaA D3H41_23015 IPR038404 TRAP transporter solute receptor DctP superfamily D3H41_23020 IPR023588 Transcription regulator HTH, PurR D3H41_23020 IPR028082 Periplasmic binding protein-like I D3H41_23020 IPR000843 LacI-type HTH domain D3H41_23020 IPR010982 Lambda repressor-like, DNA-binding domain superfamily D3H41_23025 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily D3H41_23025 IPR040442 Pyruvate kinase-like domain superfamily D3H41_23025 IPR005000 HpcH/HpaI aldolase/citrate lyase domain D3H41_23025 IPR017648 5-keto-4-deoxy-D-glucarate aldolase D3H41_23035 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase D3H41_23035 IPR020904 Short-chain dehydrogenase/reductase, conserved site D3H41_23035 IPR036291 NAD(P)-binding domain superfamily D3H41_23035 IPR002347 Short-chain dehydrogenase/reductase SDR D3H41_23045 IPR000639 Epoxide hydrolase-like D3H41_23045 IPR029058 Alpha/Beta hydrolase fold D3H41_23045 IPR000073 Alpha/beta hydrolase fold-1 D3H41_23045 IPR023791 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase D3H41_23060 IPR020846 Major facilitator superfamily domain D3H41_23060 IPR036259 MFS transporter superfamily D3H41_23060 IPR011701 Major facilitator superfamily D3H41_23060 IPR005829 Sugar transporter, conserved site D3H41_23065 IPR038377 Sodium/glucose symporter superfamily D3H41_23065 IPR018212 Sodium/solute symporter, conserved site D3H41_23065 IPR001734 Sodium/solute symporter D3H41_23070 IPR005130 Serine dehydratase-like, alpha subunit D3H41_23070 IPR029009 Allosteric substrate binding domain superfamily D3H41_23070 IPR005131 Serine dehydratase beta chain D3H41_23070 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form D3H41_23075 IPR013780 Glycosyl hydrolase, all-beta D3H41_23075 IPR017853 Glycoside hydrolase superfamily D3H41_23075 IPR011837 Glycogen debranching enzyme, GlgX type D3H41_23075 IPR004193 Glycoside hydrolase, family 13, N-terminal D3H41_23075 IPR014756 Immunoglobulin E-set D3H41_23075 IPR013783 Immunoglobulin-like fold D3H41_23075 IPR006047 Glycosyl hydrolase, family 13, catalytic domain D3H41_23080 IPR036998 Porin, LamB-type superfamily D3H41_23080 IPR023738 Maltoporin D3H41_23080 IPR003192 Porin, LamB-type D3H41_23100 IPR013780 Glycosyl hydrolase, all-beta D3H41_23100 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain D3H41_23100 IPR006047 Glycosyl hydrolase, family 13, catalytic domain D3H41_23100 IPR017853 Glycoside hydrolase superfamily D3H41_23100 IPR032091 Maltogenic Amylase, C-terminal D3H41_23100 IPR013783 Immunoglobulin-like fold D3H41_23105 IPR007346 Endonuclease I D3H41_23110 IPR004193 Glycoside hydrolase, family 13, N-terminal D3H41_23110 IPR006047 Glycosyl hydrolase, family 13, catalytic domain D3H41_23110 IPR013780 Glycosyl hydrolase, all-beta D3H41_23110 IPR017853 Glycoside hydrolase superfamily D3H41_23110 IPR013783 Immunoglobulin-like fold D3H41_23110 IPR014756 Immunoglobulin E-set D3H41_23110 IPR040671 Pullulanase, N2 domain D3H41_23110 IPR041111 Pullulanase, Ins domain D3H41_23110 IPR011839 Alpha-1,6-glucosidases, pullulanase-type D3H41_23110 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal D3H41_23110 IPR005323 Pullulanase, carbohydrate-binding module 41 D3H41_23110 IPR013784 Carbohydrate-binding-like fold D3H41_23125 IPR000310 Orn/Lys/Arg decarboxylase, major domain D3H41_23125 IPR011193 Ornithine/lysine/arginine decarboxylase D3H41_23125 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal D3H41_23125 IPR027568 Ornithine decarboxylase SpeF D3H41_23125 IPR011006 CheY-like superfamily D3H41_23125 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 D3H41_23125 IPR027464 Ornithine decarboxylase, N-terminal D3H41_23125 IPR015421 Pyridoxal phosphate-dependent transferase, major domain D3H41_23125 IPR015424 Pyridoxal phosphate-dependent transferase D3H41_23125 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily D3H41_23125 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal D3H41_23130 IPR027566 Putrescine transporter PotE D3H41_23130 IPR002293 Amino acid/polyamine transporter I D3H41_23130 IPR004754 Amino acid antiporter D3H41_23140 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase D3H41_23140 IPR023685 Pyridoxal kinase PdxY D3H41_23140 IPR004625 Pyridoxine kinase D3H41_23140 IPR029056 Ribokinase-like D3H41_23145 IPR023025 Serine/threonine transporter SstT D3H41_23145 IPR001991 Sodium:dicarboxylate symporter D3H41_23145 IPR036458 Sodium:dicarboxylate symporter superfamily D3H41_23150 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain D3H41_23150 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_23150 IPR004881 Ribosome biogenesis GTPase RsgA D3H41_23150 IPR010914 RsgA GTPase domain D3H41_23155 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component D3H41_23155 IPR036878 Glucose permease domain IIB D3H41_23155 IPR001996 Phosphotransferase system, IIB component, type 1 D3H41_23155 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site D3H41_23155 IPR013013 Phosphotransferase system, EIIC component, type 1 D3H41_23155 IPR003352 Phosphotransferase system, EIIC D3H41_23160 IPR003782 Copper chaperone SCO1/SenC D3H41_23160 IPR036249 Thioredoxin-like superfamily D3H41_23175 IPR041617 MalT-like TPR region D3H41_23175 IPR011990 Tetratricopeptide-like helical domain superfamily D3H41_23175 IPR000792 Transcription regulator LuxR, C-terminal D3H41_23175 IPR023768 Transcriptional regulator HTH-type, MalT D3H41_23175 IPR016032 Signal transduction response regulator, C-terminal effector D3H41_23175 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_23175 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_23180 IPR011833 Glycogen/starch/alpha-glucan phosphorylase D3H41_23180 IPR035090 Phosphorylase pyridoxal-phosphate attachment site D3H41_23180 IPR000811 Glycosyl transferase, family 35 D3H41_23185 IPR003385 Glycoside hydrolase, family 77 D3H41_23185 IPR017853 Glycoside hydrolase superfamily D3H41_23190 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB D3H41_23190 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta D3H41_23190 IPR013780 Glycosyl hydrolase, all-beta D3H41_23190 IPR014756 Immunoglobulin E-set D3H41_23190 IPR013783 Immunoglobulin-like fold D3H41_23190 IPR037439 1,4-alpha-glucan-branching enzyme D3H41_23190 IPR004193 Glycoside hydrolase, family 13, N-terminal D3H41_23190 IPR017853 Glycoside hydrolase superfamily D3H41_23190 IPR006047 Glycosyl hydrolase, family 13, catalytic domain D3H41_23195 IPR023346 Lysozyme-like domain superfamily D3H41_23195 IPR011812 Biosynthetic peptidoglycan transglycosylase D3H41_23195 IPR001264 Glycosyl transferase, family 51 D3H41_23195 IPR036950 Penicillin binding protein transglycosylase domain D3H41_23200 IPR017853 Glycoside hydrolase superfamily D3H41_23200 IPR006047 Glycosyl hydrolase, family 13, catalytic domain D3H41_23200 IPR014635 Alpha-amylase, MalS type D3H41_23215 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain D3H41_23220 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain D3H41_23225 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria D3H41_23225 IPR011650 Peptidase M20, dimerisation domain D3H41_23225 IPR036264 Bacterial exopeptidase dimerisation domain D3H41_23225 IPR002933 Peptidase M20 D3H41_23230 IPR010652 Domain of unknown function DUF1232 D3H41_23245 IPR001991 Sodium:dicarboxylate symporter D3H41_23245 IPR036458 Sodium:dicarboxylate symporter superfamily D3H41_23245 IPR034703 Proton/glutamate-aspartate symporter GltP D3H41_23245 IPR033380 Glutamate-aspartate symport protein GltP/GltT D3H41_23245 IPR018107 Sodium:dicarboxylate symporter, conserved site D3H41_23255 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_23255 IPR005119 LysR, substrate-binding D3H41_23255 IPR000847 Transcription regulator HTH, LysR D3H41_23255 IPR036390 Winged helix DNA-binding domain superfamily D3H41_23260 IPR014910 Putative monooxygenase YdhR D3H41_23260 IPR011008 Dimeric alpha-beta barrel D3H41_23270 IPR005702 Exopolysaccharide synthesis protein D3H41_23270 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_23270 IPR025669 AAA domain D3H41_23270 IPR003856 Polysaccharide chain length determinant N-terminal domain D3H41_23270 IPR032807 Tyrosine kinase, G-rich domain D3H41_23275 IPR017867 Protein-tyrosine phosphatase, low molecular weight D3H41_23275 IPR023485 Phosphotyrosine protein phosphatase I D3H41_23275 IPR036196 Phosphotyrosine protein phosphatase I superfamily D3H41_23280 IPR040716 Outer-membrane lipoprotein Wza, C-terminal domain D3H41_23280 IPR003715 Polysaccharide export protein D3H41_23280 IPR019554 Soluble ligand binding domain D3H41_23285 IPR000415 Nitroreductase-like D3H41_23285 IPR029479 Nitroreductase D3H41_23285 IPR016446 Flavin oxidoreductase Frp family D3H41_23290 IPR002771 Multiple antibiotic resistance (MarC)-related D3H41_23295 IPR002641 Patatin-like phospholipase domain D3H41_23295 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase D3H41_23295 IPR037483 YjjU-like D3H41_23300 IPR014756 Immunoglobulin E-set D3H41_23300 IPR020879 N-acetylglucosamine-binding protein A D3H41_23300 IPR041029 N-acetylglucosamine binding protein A domain 2 D3H41_23300 IPR004302 Cellulose/chitin-binding protein, N-terminal D3H41_23305 IPR036378 FAS1 domain superfamily D3H41_23305 IPR000782 FAS1 domain D3H41_23310 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily D3H41_23310 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3H41_23310 IPR006050 DNA photolyase, N-terminal D3H41_23310 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal D3H41_23310 IPR002081 Cryptochrome/DNA photolyase class 1 D3H41_23310 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain D3H41_23310 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily D3H41_23325 IPR002410 Peptidase S33 D3H41_23325 IPR000073 Alpha/beta hydrolase fold-1 D3H41_23325 IPR029058 Alpha/Beta hydrolase fold D3H41_23330 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal D3H41_23330 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal D3H41_23330 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A D3H41_23330 IPR015956 Penicillin-binding protein, C-terminal domain superfamily D3H41_23330 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily D3H41_23330 IPR012338 Beta-lactamase/transpeptidase-like D3H41_23335 IPR017853 Glycoside hydrolase superfamily D3H41_23335 IPR002044 Carbohydrate binding module family 20 D3H41_23335 IPR013780 Glycosyl hydrolase, all-beta D3H41_23335 IPR013783 Immunoglobulin-like fold D3H41_23335 IPR013784 Carbohydrate-binding-like fold D3H41_23335 IPR031319 Alpha-amylase, C-terminal domain D3H41_23335 IPR006047 Glycosyl hydrolase, family 13, catalytic domain D3H41_23340 IPR020449 Transcription regulator HTH, AraC- type D3H41_23340 IPR009057 Homeobox-like domain superfamily D3H41_23340 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal D3H41_23340 IPR018060 DNA binding HTH domain, AraC-type D3H41_23345 IPR033878 Nitroreductase NfsB-like D3H41_23345 IPR029479 Nitroreductase D3H41_23345 IPR000415 Nitroreductase-like D3H41_23355 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_23355 IPR036390 Winged helix DNA-binding domain superfamily D3H41_23355 IPR005119 LysR, substrate-binding D3H41_23355 IPR000847 Transcription regulator HTH, LysR D3H41_23360 IPR036361 SAP domain superfamily D3H41_23360 IPR018668 DNA-binding protein VF530-like D3H41_23370 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain D3H41_23370 IPR017927 FAD-binding domain, ferredoxin reductase-type D3H41_23370 IPR033892 Ferredoxin--NADP reductase, bacteria D3H41_23370 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain D3H41_23370 IPR001433 Oxidoreductase FAD/NAD(P)-binding D3H41_23370 IPR017938 Riboflavin synthase-like beta-barrel D3H41_23380 IPR018635 Uncharacterised protein family UPF0319 D3H41_23385 IPR002549 Transmembrane protein TqsA-like D3H41_23395 IPR039562 Membrane fusion protein, biotin-lipoyl like domain D3H41_23395 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA D3H41_23395 IPR006143 RND efflux pump, membrane fusion protein D3H41_23420 IPR000620 EamA domain D3H41_23425 IPR036390 Winged helix DNA-binding domain superfamily D3H41_23425 IPR005119 LysR, substrate-binding D3H41_23425 IPR000847 Transcription regulator HTH, LysR D3H41_23425 IPR037402 HTH-type transcriptional regulator YidZ, PBP2 domain D3H41_23425 IPR023746 Transcription regulator HTH, YidZ D3H41_23425 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_23430 IPR011701 Major facilitator superfamily D3H41_23430 IPR020846 Major facilitator superfamily domain D3H41_23430 IPR036259 MFS transporter superfamily D3H41_23430 IPR023697 Multidrug resistance protein MdtL D3H41_23430 IPR005829 Sugar transporter, conserved site D3H41_23445 IPR000182 GNAT domain D3H41_23445 IPR016181 Acyl-CoA N-acyltransferase D3H41_23455 IPR039420 Transcriptional regulatory protein WalR-like D3H41_23455 IPR011006 CheY-like superfamily D3H41_23455 IPR001867 OmpR/PhoB-type DNA-binding domain D3H41_23455 IPR016032 Signal transduction response regulator, C-terminal effector D3H41_23455 IPR001789 Signal transduction response regulator, receiver domain D3H41_23455 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_23460 IPR003594 Histidine kinase/HSP90-like ATPase D3H41_23460 IPR003660 HAMP domain D3H41_23460 IPR004358 Signal transduction histidine kinase-related protein, C-terminal D3H41_23460 IPR029151 Periplasmic sensor-like domain superfamily D3H41_23460 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily D3H41_23460 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain D3H41_23460 IPR005467 Histidine kinase domain D3H41_23460 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3H41_23480 IPR018225 Transaldolase, active site D3H41_23480 IPR001585 Transaldolase/Fructose-6-phosphate aldolase D3H41_23480 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase D3H41_23480 IPR013785 Aldolase-type TIM barrel D3H41_23480 IPR023001 Fructose-6-phosphate aldolase D3H41_23480 IPR033919 Transaldolase/Fructose-6-phosphate aldolase, archaeal/bacterial D3H41_23485 IPR007197 Radical SAM D3H41_23485 IPR013785 Aldolase-type TIM barrel D3H41_23485 IPR034465 Pyruvate formate-lyase activase D3H41_23485 IPR001989 Radical-activating enzyme, conserved site D3H41_23485 IPR034457 Organic radical-activating enzymes D3H41_23485 IPR012839 Organic radical enzyme activase D3H41_23510 IPR012544 Bacterial Pleckstrin homology domain D3H41_23510 IPR037063 Bacterial Pleckstrin homology domain superfamily D3H41_23525 IPR036737 OmpA-like domain superfamily D3H41_23525 IPR006665 OmpA-like domain D3H41_23525 IPR025713 Motility protein B, N-terminal domain D3H41_23530 IPR000540 Flagellar motor protein MotA, conserved site D3H41_23530 IPR002898 MotA/TolQ/ExbB proton channel D3H41_23530 IPR022522 Flagellar motor stator, MotA D3H41_23535 IPR013324 RNA polymerase sigma factor, region 3/4-like D3H41_23535 IPR013325 RNA polymerase sigma factor, region 2 D3H41_23535 IPR012845 RNA polymerase sigma factor, FliA/WhiG D3H41_23535 IPR007630 RNA polymerase sigma-70 region 4 D3H41_23535 IPR007627 RNA polymerase sigma-70 region 2 D3H41_23535 IPR000943 RNA polymerase sigma-70 D3H41_23535 IPR014284 RNA polymerase sigma-70 like domain D3H41_23540 IPR005503 Flagellar basal body-associated protein FliL D3H41_23555 IPR036584 Flagellar protein FliS superfamily D3H41_23555 IPR003713 Flagellar protein FliS D3H41_23560 IPR003481 Flagellar hook-associated protein 2, N-terminal D3H41_23560 IPR010809 Flagellar hook-associated protein 2, C-terminal D3H41_23560 IPR010810 Flagellin hook, IN motif D3H41_23560 IPR040026 Flagellar hook-associated protein 2 D3H41_23575 IPR001492 Flagellin D3H41_23575 IPR001029 Flagellin, D0/D1 domain D3H41_23575 IPR042187 Flagellin, C-terminal domain, subdomain 2 D3H41_23585 IPR001712 Type III secretion system FHIPEP D3H41_23585 IPR006301 Flagellar biosynthesis protein FlhA D3H41_23585 IPR025505 FHIPEP conserved site D3H41_23585 IPR042196 FHIPEP, domain 4 D3H41_23585 IPR042193 FHIPEP, domain 3 D3H41_23585 IPR042194 FHIPEP, domain 1 D3H41_23590 IPR029025 Type III secretion system substrate exporter, C-terminal D3H41_23590 IPR006135 Type III secretion system substrate exporter D3H41_23590 IPR006136 Flagellar biosynthetic protein FlhB D3H41_23595 IPR006303 Flagellar biosynthesis protein FliR D3H41_23595 IPR002010 Type III secretion system inner membrane R protein D3H41_23600 IPR006305 Flagellar biosynthesis protein FliQ D3H41_23600 IPR002191 Bacterial export protein family 3 D3H41_23605 IPR005837 Flagellar transport protein FliP D3H41_23605 IPR005838 Type III secretion system inner membrane P protein D3H41_23610 IPR012826 Flagellar motor switch FliN D3H41_23610 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb D3H41_23610 IPR001543 Surface presentation of antigen (SpoA) D3H41_23610 IPR036429 SpoA-like superfamily D3H41_23625 IPR002078 RNA polymerase sigma factor 54 interaction domain D3H41_23625 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 D3H41_23625 IPR011006 CheY-like superfamily D3H41_23625 IPR003593 AAA+ ATPase domain D3H41_23625 IPR025944 Sigma-54 interaction domain, conserved site D3H41_23625 IPR009057 Homeobox-like domain superfamily D3H41_23625 IPR002197 DNA binding HTH domain, Fis-type D3H41_23625 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_23625 IPR001789 Signal transduction response regulator, receiver domain D3H41_23625 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 D3H41_23630 IPR001624 Flagellar hook-basal body complex protein FliE D3H41_23635 IPR000067 Flagellar M-ring protein FliF D3H41_23635 IPR013556 Flagellar M-ring C-terminal D3H41_23635 IPR006182 Secretory protein YscJ/FliF D3H41_23640 IPR000090 Flagellar motor switch protein FliG D3H41_23640 IPR023087 Flagellar motor switch protein FliG, C-terminal D3H41_23640 IPR011002 Flagellar motor switch protein FliG, alpha-helical D3H41_23640 IPR032779 Flagellar motor switch protein FliG, middle domain D3H41_23640 IPR028263 Flagellar motor switch protein FliG, N-terminal domain D3H41_23650 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_23650 IPR040627 T3SS EscN ATPase, C-terminal D3H41_23650 IPR003593 AAA+ ATPase domain D3H41_23650 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site D3H41_23650 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain D3H41_23650 IPR032463 ATPase, type III secretion system, FliI D3H41_23650 IPR005714 ATPase, type III secretion system, FliI/YscN D3H41_23650 IPR020005 Flagellar export ATPase FliI, clade 1 D3H41_23665 IPR005119 LysR, substrate-binding D3H41_23665 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_23665 IPR036390 Winged helix DNA-binding domain superfamily D3H41_23665 IPR000847 Transcription regulator HTH, LysR D3H41_23680 IPR023710 Probable phosphatase YcdX D3H41_23680 IPR016195 Polymerase/histidinol phosphatase-like D3H41_23680 IPR003141 Polymerase/histidinol phosphatase, N-terminal D3H41_23700 IPR037478 YwkD-like domain D3H41_23700 IPR037523 Vicinal oxygen chelate (VOC) domain D3H41_23700 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D3H41_23700 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain D3H41_23705 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_23705 IPR000847 Transcription regulator HTH, LysR D3H41_23705 IPR036390 Winged helix DNA-binding domain superfamily D3H41_23705 IPR005119 LysR, substrate-binding D3H41_23725 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_23725 IPR039420 Transcriptional regulatory protein WalR-like D3H41_23725 IPR001867 OmpR/PhoB-type DNA-binding domain D3H41_23725 IPR016032 Signal transduction response regulator, C-terminal effector D3H41_23725 IPR001789 Signal transduction response regulator, receiver domain D3H41_23725 IPR011006 CheY-like superfamily D3H41_23730 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3H41_23730 IPR001789 Signal transduction response regulator, receiver domain D3H41_23730 IPR004358 Signal transduction histidine kinase-related protein, C-terminal D3H41_23730 IPR035965 PAS domain superfamily D3H41_23730 IPR011006 CheY-like superfamily D3H41_23730 IPR003594 Histidine kinase/HSP90-like ATPase D3H41_23730 IPR000700 PAS-associated, C-terminal D3H41_23730 IPR000014 PAS domain D3H41_23730 IPR001610 PAC motif D3H41_23730 IPR005467 Histidine kinase domain D3H41_23730 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily D3H41_23730 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain D3H41_23730 IPR013656 PAS fold-4 D3H41_23735 IPR018152 Superoxide dismutase, copper/zinc, binding site D3H41_23735 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone D3H41_23735 IPR001424 Superoxide dismutase, copper/zinc binding domain D3H41_23735 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily D3H41_23750 IPR035965 PAS domain superfamily D3H41_23750 IPR000160 GGDEF domain D3H41_23750 IPR001633 EAL domain D3H41_23750 IPR005330 MHYT domain D3H41_23750 IPR029787 Nucleotide cyclase D3H41_23750 IPR000014 PAS domain D3H41_23750 IPR035919 EAL domain superfamily D3H41_23755 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site D3H41_23755 IPR004839 Aminotransferase, class I/classII D3H41_23755 IPR015424 Pyridoxal phosphate-dependent transferase D3H41_23755 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase D3H41_23755 IPR015421 Pyridoxal phosphate-dependent transferase, major domain D3H41_23755 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 D3H41_23760 IPR013149 Alcohol dehydrogenase, C-terminal D3H41_23760 IPR013154 Alcohol dehydrogenase, N-terminal D3H41_23760 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site D3H41_23760 IPR011032 GroES-like superfamily D3H41_23760 IPR004627 L-threonine 3-dehydrogenase D3H41_23760 IPR020843 Polyketide synthase, enoylreductase domain D3H41_23760 IPR036291 NAD(P)-binding domain superfamily D3H41_23790 IPR023561 Carbonic anhydrase, alpha-class D3H41_23790 IPR018338 Carbonic anhydrase, alpha-class, conserved site D3H41_23790 IPR041891 Carbonic anhydrase, prokaryotic-like D3H41_23790 IPR001148 Alpha carbonic anhydrase domain D3H41_23790 IPR036398 Alpha carbonic anhydrase domain superfamily D3H41_23795 IPR006685 Mechanosensitive ion channel MscS D3H41_23795 IPR010920 LSM domain superfamily D3H41_23795 IPR011066 Mechanosensitive ion channel MscS, C-terminal D3H41_23795 IPR023408 Mechanosensitive ion channel MscS domain superfamily D3H41_23795 IPR006686 Mechanosensitive ion channel MscS, conserved site D3H41_23795 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 D3H41_23805 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site D3H41_23805 IPR013785 Aldolase-type TIM barrel D3H41_23805 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent D3H41_23805 IPR000262 FMN-dependent dehydrogenase D3H41_23805 IPR020920 L-lactate dehydrogenase, bacterial D3H41_23805 IPR037396 FMN hydroxy acid dehydrogenase domain D3H41_23810 IPR003804 L-lactate permease D3H41_23815 IPR036390 Winged helix DNA-binding domain superfamily D3H41_23815 IPR005119 LysR, substrate-binding D3H41_23815 IPR000847 Transcription regulator HTH, LysR D3H41_23815 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_23820 IPR023302 Peptidase S9A, N-terminal domain D3H41_23820 IPR002470 Peptidase S9A, prolyl oligopeptidase D3H41_23820 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain D3H41_23820 IPR002471 Peptidase S9, serine active site D3H41_23820 IPR029058 Alpha/Beta hydrolase fold D3H41_23825 IPR003593 AAA+ ATPase domain D3H41_23825 IPR003439 ABC transporter-like D3H41_23825 IPR017871 ABC transporter, conserved site D3H41_23825 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal D3H41_23825 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_23835 IPR020568 Ribosomal protein S5 domain 2-type fold D3H41_23835 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D3H41_23835 IPR027065 Lon protease D3H41_23835 IPR008269 Peptidase S16, Lon proteolytic domain D3H41_23835 IPR041699 Lon protease, AAA domain D3H41_23840 IPR004090 Chemotaxis methyl-accepting receptor D3H41_23840 IPR003660 HAMP domain D3H41_23840 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain D3H41_23840 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain D3H41_23840 IPR000727 Target SNARE coiled-coil homology domain D3H41_23845 IPR023614 Porin domain superfamily D3H41_23845 IPR033900 Porin domain, Gram-negative type D3H41_23850 IPR009875 PilZ domain D3H41_23850 IPR012349 FMN-binding split barrel D3H41_23850 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal D3H41_23865 IPR000182 GNAT domain D3H41_23865 IPR016181 Acyl-CoA N-acyltransferase D3H41_23870 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain D3H41_23870 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site D3H41_23870 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal D3H41_23870 IPR004494 MauM/NapG ferredoxin-type protein D3H41_23875 IPR011886 Ferredoxin-type protein, NapH/MauN family D3H41_23875 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site D3H41_23875 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain D3H41_23895 IPR003439 ABC transporter-like D3H41_23895 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_23895 IPR003593 AAA+ ATPase domain D3H41_23895 IPR017871 ABC transporter, conserved site D3H41_23895 IPR022216 Putative ABC cobalt transporter D3H41_23900 IPR022914 Protein of unknown function UPF0397 D3H41_23900 IPR009825 ECF transporter, substrate-specific component-like D3H41_23905 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain D3H41_23910 IPR011223 Uncharacterised conserved protein UCP028770 D3H41_23930 IPR035994 Nucleoside phosphorylase superfamily D3H41_23930 IPR004402 Purine nucleoside phosphorylase DeoD-type D3H41_23930 IPR000845 Nucleoside phosphorylase domain D3H41_23935 IPR013560 Domain of unknown function DUF1722 D3H41_23940 IPR009061 Putative DNA-binding domain superfamily D3H41_23940 IPR000551 MerR-type HTH domain D3H41_23945 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal D3H41_23945 IPR002081 Cryptochrome/DNA photolyase class 1 D3H41_23945 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily D3H41_23945 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily D3H41_23945 IPR006050 DNA photolyase, N-terminal D3H41_23945 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain D3H41_23945 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3H41_23950 IPR018392 LysM domain D3H41_23950 IPR041597 L,D-transpeptidase C-terminal domain D3H41_23950 IPR005490 L,D-transpeptidase catalytic domain D3H41_23950 IPR038063 L,D-transpeptidase catalytic domain-like D3H41_23960 IPR028621 ATP-dependent RNA helicase SrmB D3H41_23960 IPR014014 RNA helicase, DEAD-box type, Q motif D3H41_23960 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site D3H41_23960 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_23960 IPR001650 Helicase, C-terminal D3H41_23960 IPR014001 Helicase superfamily 1/2, ATP-binding domain D3H41_23960 IPR011545 DEAD/DEAH box helicase domain D3H41_23965 IPR002471 Peptidase S9, serine active site D3H41_23965 IPR023302 Peptidase S9A, N-terminal domain D3H41_23965 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain D3H41_23965 IPR002470 Peptidase S9A, prolyl oligopeptidase D3H41_23965 IPR029058 Alpha/Beta hydrolase fold D3H41_23970 IPR037066 TonB-dependent receptor, plug domain superfamily D3H41_23970 IPR039426 Vitamin B12 transporter BtuB-like D3H41_23970 IPR011276 TonB-dependent haem/haemoglobin receptor D3H41_23970 IPR010917 TonB-dependent receptor, conserved site D3H41_23970 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor D3H41_23970 IPR012910 TonB-dependent receptor, plug domain D3H41_23970 IPR000531 TonB-dependent receptor-like, beta-barrel D3H41_23990 IPR003660 HAMP domain D3H41_23990 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain D3H41_23990 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain D3H41_23990 IPR004090 Chemotaxis methyl-accepting receptor D3H41_23990 IPR000727 Target SNARE coiled-coil homology domain D3H41_23995 IPR024370 PBP domain D3H41_24000 IPR000515 ABC transporter type 1, transmembrane domain MetI-like D3H41_24000 IPR035906 MetI-like superfamily D3H41_24000 IPR011864 Phosphate ABC transporter, permease protein PstC D3H41_24005 IPR000515 ABC transporter type 1, transmembrane domain MetI-like D3H41_24005 IPR035906 MetI-like superfamily D3H41_24005 IPR005672 Phosphate transport system permease protein PstA D3H41_24010 IPR015850 ABC transporter, phosphate import, PstB D3H41_24010 IPR017871 ABC transporter, conserved site D3H41_24010 IPR003593 AAA+ ATPase domain D3H41_24010 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_24010 IPR005670 Phosphate transport system permease protein 1 D3H41_24010 IPR003439 ABC transporter-like D3H41_24030 IPR002035 von Willebrand factor, type A D3H41_24030 IPR022933 Uncharacterised protein family UPF0353 D3H41_24030 IPR036465 von Willebrand factor A-like domain superfamily D3H41_24035 IPR002035 von Willebrand factor, type A D3H41_24035 IPR036465 von Willebrand factor A-like domain superfamily D3H41_24035 IPR022933 Uncharacterised protein family UPF0353 D3H41_24045 IPR002881 Domain of unknown function DUF58 D3H41_24045 IPR036465 von Willebrand factor A-like domain superfamily D3H41_24050 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_24050 IPR011703 ATPase, AAA-3 D3H41_24050 IPR041628 ChlI/MoxR, AAA lid domain D3H41_24055 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain D3H41_24055 IPR029151 Periplasmic sensor-like domain superfamily D3H41_24055 IPR000727 Target SNARE coiled-coil homology domain D3H41_24055 IPR033479 Double Cache domain 1 D3H41_24055 IPR003660 HAMP domain D3H41_24065 IPR016032 Signal transduction response regulator, C-terminal effector D3H41_24065 IPR000792 Transcription regulator LuxR, C-terminal D3H41_24065 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_24070 IPR016032 Signal transduction response regulator, C-terminal effector D3H41_24070 IPR000792 Transcription regulator LuxR, C-terminal D3H41_24070 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_24080 IPR011527 ABC transporter type 1, transmembrane domain D3H41_24080 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_24080 IPR010128 ATPase, type I secretion system, PrtD D3H41_24080 IPR017871 ABC transporter, conserved site D3H41_24080 IPR003439 ABC transporter-like D3H41_24080 IPR036640 ABC transporter type 1, transmembrane domain superfamily D3H41_24080 IPR003593 AAA+ ATPase domain D3H41_24085 IPR010129 Type I secretion membrane fusion protein, HlyD family D3H41_24085 IPR006144 Secretion protein HlyD, conserved site D3H41_24095 IPR000522 ABC transporter, permease protein, BtuC-like D3H41_24095 IPR037294 ABC transporter, BtuC-like D3H41_24100 IPR002491 ABC transporter periplasmic binding domain D3H41_24105 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_24105 IPR017871 ABC transporter, conserved site D3H41_24105 IPR003439 ABC transporter-like D3H41_24105 IPR003593 AAA+ ATPase domain D3H41_24110 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D3H41_24110 IPR010917 TonB-dependent receptor, conserved site D3H41_24110 IPR037066 TonB-dependent receptor, plug domain superfamily D3H41_24110 IPR010105 TonB-dependent siderophore receptor D3H41_24110 IPR012910 TonB-dependent receptor, plug domain D3H41_24110 IPR000531 TonB-dependent receptor-like, beta-barrel D3H41_24110 IPR039423 TonB-dependent receptor-like D3H41_24115 IPR003593 AAA+ ATPase domain D3H41_24115 IPR011527 ABC transporter type 1, transmembrane domain D3H41_24115 IPR017871 ABC transporter, conserved site D3H41_24115 IPR003439 ABC transporter-like D3H41_24115 IPR036640 ABC transporter type 1, transmembrane domain superfamily D3H41_24115 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_24115 IPR039421 Type I protein exporter D3H41_24120 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain D3H41_24120 IPR005467 Histidine kinase domain D3H41_24120 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3H41_24120 IPR003594 Histidine kinase/HSP90-like ATPase D3H41_24120 IPR004358 Signal transduction histidine kinase-related protein, C-terminal D3H41_24120 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily D3H41_24125 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_24125 IPR001789 Signal transduction response regulator, receiver domain D3H41_24125 IPR001867 OmpR/PhoB-type DNA-binding domain D3H41_24125 IPR011006 CheY-like superfamily D3H41_24125 IPR039420 Transcriptional regulatory protein WalR-like D3H41_24130 IPR003148 Regulator of K+ conductance, N-terminal D3H41_24130 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily D3H41_24130 IPR006037 Regulator of K+ conductance, C-terminal D3H41_24130 IPR036291 NAD(P)-binding domain superfamily D3H41_24135 IPR003445 Cation transporter D3H41_24135 IPR004772 TrkH potassium transport family D3H41_24140 IPR000847 Transcription regulator HTH, LysR D3H41_24140 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_24140 IPR005119 LysR, substrate-binding D3H41_24140 IPR036390 Winged helix DNA-binding domain superfamily D3H41_24145 IPR000060 BCCT transporter family D3H41_24145 IPR018093 BCCT transporter, conserved site D3H41_24150 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily D3H41_24150 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit D3H41_24150 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain D3H41_24150 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site D3H41_24150 IPR039004 Carnitine monooxygenase oxygenase subunit D3H41_24150 IPR017941 Rieske [2Fe-2S] iron-sulphur domain D3H41_24160 IPR036188 FAD/NAD(P)-binding domain superfamily D3H41_24160 IPR041364 Rubredoxin binding domain D3H41_24160 IPR023753 FAD/NAD(P)-binding domain D3H41_24165 IPR006076 FAD dependent oxidoreductase D3H41_24165 IPR036188 FAD/NAD(P)-binding domain superfamily D3H41_24175 IPR000923 Blue (type 1) copper domain D3H41_24175 IPR014068 Azurin D3H41_24175 IPR028871 Blue (type 1) copper protein, binding site D3H41_24175 IPR008972 Cupredoxin D3H41_24180 IPR023214 HAD superfamily D3H41_24180 IPR023198 Phosphoglycolate phosphatase-like, domain 2 D3H41_24180 IPR006439 HAD hydrolase, subfamily IA D3H41_24180 IPR036412 HAD-like superfamily D3H41_24180 IPR041492 Haloacid dehalogenase-like hydrolase D3H41_24190 IPR029016 GAF-like domain superfamily D3H41_24190 IPR009057 Homeobox-like domain superfamily D3H41_24190 IPR023944 Anaerobic nitric oxide reductase transcription regulator D3H41_24190 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_24190 IPR002078 RNA polymerase sigma factor 54 interaction domain D3H41_24190 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 D3H41_24190 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 D3H41_24190 IPR025944 Sigma-54 interaction domain, conserved site D3H41_24190 IPR003018 GAF domain D3H41_24190 IPR003593 AAA+ ATPase domain D3H41_24195 IPR016440 Rubredoxin-oxygen oxidoreductase D3H41_24195 IPR023957 Anaerobic nitric oxide reductase flavorubredoxin D3H41_24195 IPR008254 Flavodoxin/nitric oxide synthase D3H41_24195 IPR029039 Flavoprotein-like superfamily D3H41_24195 IPR024935 Rubredoxin domain D3H41_24195 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like D3H41_24195 IPR024934 Rubredoxin-like domain D3H41_24195 IPR001279 Metallo-beta-lactamase D3H41_24200 IPR023961 Nitric oxide reductase FlRd-NAD(+) reductase D3H41_24200 IPR023753 FAD/NAD(P)-binding domain D3H41_24200 IPR036188 FAD/NAD(P)-binding domain superfamily D3H41_24200 IPR041364 Rubredoxin binding domain D3H41_24210 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site D3H41_24210 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily D3H41_24210 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding D3H41_24210 IPR015815 3-hydroxyisobutyrate dehydrogenase-related D3H41_24210 IPR036291 NAD(P)-binding domain superfamily D3H41_24210 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain D3H41_24210 IPR013328 6-phosphogluconate dehydrogenase, domain 2 D3H41_24215 IPR020835 Catalase superfamily D3H41_24215 IPR040333 Catalase, clade 3 D3H41_24215 IPR018028 Catalase, mono-functional, haem-containing D3H41_24215 IPR010582 Catalase immune-responsive domain D3H41_24215 IPR002226 Catalase haem-binding site D3H41_24215 IPR037060 Catalase core domain superfamily D3H41_24215 IPR024708 Catalase active site D3H41_24215 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 D3H41_24215 IPR011614 Catalase core domain D3H41_24220 IPR036282 Glutathione S-transferase, C-terminal domain superfamily D3H41_24220 IPR040079 Glutathione Transferase family D3H41_24220 IPR036249 Thioredoxin-like superfamily D3H41_24220 IPR034333 Glutathione S-transferases, class Zeta , N-terminal D3H41_24220 IPR034330 Glutathione S-transferases, class Zeta , C-terminal D3H41_24220 IPR010987 Glutathione S-transferase, C-terminal-like D3H41_24220 IPR004045 Glutathione S-transferase, N-terminal D3H41_24220 IPR005955 Glutathione S-transferases, class Zeta D3H41_24225 IPR020843 Polyketide synthase, enoylreductase domain D3H41_24225 IPR013149 Alcohol dehydrogenase, C-terminal D3H41_24225 IPR036291 NAD(P)-binding domain superfamily D3H41_24225 IPR041694 Oxidoreductase, N-terminal domain D3H41_24225 IPR011032 GroES-like superfamily D3H41_24230 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily D3H41_24230 IPR009057 Homeobox-like domain superfamily D3H41_24230 IPR011075 Tetracyclin repressor-like, C-terminal domain D3H41_24230 IPR001647 DNA-binding HTH domain, TetR-type D3H41_24265 IPR001296 Glycosyl transferase, family 1 D3H41_24265 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain D3H41_24275 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_24275 IPR003856 Polysaccharide chain length determinant N-terminal domain D3H41_24275 IPR032807 Tyrosine kinase, G-rich domain D3H41_24275 IPR005702 Exopolysaccharide synthesis protein D3H41_24275 IPR025669 AAA domain D3H41_24290 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ D3H41_24290 IPR003362 Bacterial sugar transferase D3H41_24290 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase D3H41_24295 IPR008995 Molybdate/tungstate binding, C-terminal D3H41_24295 IPR013611 Transport-associated OB, type 2 D3H41_24295 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_24295 IPR003593 AAA+ ATPase domain D3H41_24295 IPR017871 ABC transporter, conserved site D3H41_24295 IPR003439 ABC transporter-like D3H41_24295 IPR015855 ABC transporter, maltose/maltodextrin import, MalK D3H41_24300 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein D3H41_24300 IPR006061 Solute-binding family 1, conserved site D3H41_24300 IPR006059 Bacterial extracellular solute-binding protein D3H41_24305 IPR035906 MetI-like superfamily D3H41_24305 IPR000515 ABC transporter type 1, transmembrane domain MetI-like D3H41_24305 IPR029345 Maltose transport system permease protein MalF, P2 domain D3H41_24305 IPR035277 MalF, N-terminal D3H41_24305 IPR030156 Maltose/maltodextrin transport system permease protein MalF-like D3H41_24310 IPR000515 ABC transporter type 1, transmembrane domain MetI-like D3H41_24310 IPR035906 MetI-like superfamily D3H41_24340 IPR008526 Inner membrane protein YedI D3H41_24345 IPR002195 Dihydroorotase, conserved site D3H41_24345 IPR032466 Metal-dependent hydrolase D3H41_24345 IPR006680 Amidohydrolase-related D3H41_24345 IPR004721 Dihydroorotase homodimeric type D3H41_24355 IPR000612 Proteolipid membrane potential modulator D3H41_24360 IPR036010 2Fe-2S ferredoxin-like superfamily D3H41_24360 IPR011037 Pyruvate kinase-like, insert domain superfamily D3H41_24360 IPR005303 MOSC, N-terminal beta barrel D3H41_24360 IPR005302 Molybdenum cofactor sulfurase, C-terminal D3H41_24360 IPR012675 Beta-grasp domain superfamily D3H41_24360 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site D3H41_24360 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain D3H41_24360 IPR036010 2Fe-2S ferredoxin-like superfamily D3H41_24360 IPR011037 Pyruvate kinase-like, insert domain superfamily D3H41_24360 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain D3H41_24360 IPR005303 MOSC, N-terminal beta barrel D3H41_24360 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site D3H41_24360 IPR012675 Beta-grasp domain superfamily D3H41_24360 IPR005302 Molybdenum cofactor sulfurase, C-terminal D3H41_24365 IPR022926 NH(3)-dependent NAD(+) synthetase D3H41_24365 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3H41_24365 IPR003694 NAD(+) synthetase D3H41_24365 IPR022310 NAD/GMP synthase D3H41_24370 IPR004821 Cytidyltransferase-like domain D3H41_24370 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase D3H41_24370 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3H41_24410 IPR015863 ABC transporter, hemin import, HmuV D3H41_24410 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_24410 IPR003593 AAA+ ATPase domain D3H41_24410 IPR003439 ABC transporter-like D3H41_24415 IPR000522 ABC transporter, permease protein, BtuC-like D3H41_24415 IPR037294 ABC transporter, BtuC-like D3H41_24425 IPR003400 Biopolymer transport protein ExbD/TolR D3H41_24430 IPR002898 MotA/TolQ/ExbB proton channel D3H41_24435 IPR037682 TonB, C-terminal D3H41_24435 IPR003538 Gram-negative bacterial TonB protein D3H41_24435 IPR006260 TonB/TolA, C-terminal D3H41_24440 IPR034505 Anaerobic coproporphyrinogen-III oxidase D3H41_24440 IPR007197 Radical SAM D3H41_24440 IPR023404 Radical SAM, alpha/beta horseshoe D3H41_24440 IPR026332 Anaerobilin synthase HutW D3H41_24440 IPR006638 Elp3/MiaB/NifB D3H41_24445 IPR010413 Intracellular heme transport protein HutX-like D3H41_24450 IPR014419 Heme utilization protein HutZ D3H41_24450 IPR012349 FMN-binding split barrel D3H41_24450 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative D3H41_24460 IPR011006 CheY-like superfamily D3H41_24460 IPR002545 CheW-like domain D3H41_24460 IPR036061 CheW-like domain superfamily D3H41_24460 IPR024181 Chemotaxis response regulator CheV D3H41_24460 IPR001789 Signal transduction response regulator, receiver domain D3H41_24465 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site D3H41_24465 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type D3H41_24470 IPR038109 DNA-binding recombinase domain superfamily D3H41_24470 IPR006119 Resolvase, N-terminal catalytic domain D3H41_24470 IPR011109 DNA-binding recombinase domain D3H41_24470 IPR025827 Recombinase zinc beta ribbon domain D3H41_24470 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily D3H41_24475 IPR006118 Recombinase, conserved site D3H41_24475 IPR006119 Resolvase, N-terminal catalytic domain D3H41_24475 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily D3H41_24475 IPR006120 Resolvase, HTH domain D3H41_24475 IPR009057 Homeobox-like domain superfamily D3H41_24500 IPR002528 Multi antimicrobial extrusion protein D3H41_24505 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_24505 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal D3H41_24505 IPR017871 ABC transporter, conserved site D3H41_24505 IPR003439 ABC transporter-like D3H41_24505 IPR003593 AAA+ ATPase domain D3H41_24510 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_24510 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal D3H41_24510 IPR017871 ABC transporter, conserved site D3H41_24510 IPR003439 ABC transporter-like D3H41_24510 IPR003593 AAA+ ATPase domain D3H41_24515 IPR030678 Peptide/nickel binding protein, MppA-type D3H41_24515 IPR039424 Solute-binding protein family 5 D3H41_24515 IPR000914 Solute-binding protein family 5 domain D3H41_24515 IPR023765 Solute-binding protein family 5, conserved site D3H41_24520 IPR000515 ABC transporter type 1, transmembrane domain MetI-like D3H41_24520 IPR035906 MetI-like superfamily D3H41_24525 IPR001034 DeoR-type HTH domain D3H41_24525 IPR037171 NagB/RpiA transferase-like D3H41_24525 IPR018356 Transcription regulator, HTH DeoR-type, conserved site D3H41_24525 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_24525 IPR036390 Winged helix DNA-binding domain superfamily D3H41_24525 IPR014036 DeoR C-terminal sensor domain D3H41_24530 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain D3H41_24530 IPR036291 NAD(P)-binding domain superfamily D3H41_24530 IPR015815 3-hydroxyisobutyrate dehydrogenase-related D3H41_24530 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding D3H41_24530 IPR013328 6-phosphogluconate dehydrogenase, domain 2 D3H41_24530 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily D3H41_24530 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site D3H41_24535 IPR042213 Nucleotide-binding, C-terminal domain superfamily D3H41_24535 IPR031475 Nucleotide-binding C-terminal domain D3H41_24535 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily D3H41_24535 IPR010737 Four-carbon acid sugar kinase, N-terminal domain D3H41_24540 IPR036409 Class II aldolase/adducin N-terminal domain superfamily D3H41_24540 IPR001303 Class II aldolase/adducin N-terminal D3H41_24545 IPR036237 Xylose isomerase-like superfamily D3H41_24545 IPR013022 Xylose isomerase-like, TIM barrel domain D3H41_24545 IPR026040 Hydroxypyruvate isomerase-like D3H41_24550 IPR036291 NAD(P)-binding domain superfamily D3H41_24550 IPR001509 NAD-dependent epimerase/dehydratase D3H41_24555 IPR003474 Gluconate transporter D3H41_24560 IPR003735 Metal-sensitive transcriptional repressor D3H41_24560 IPR038390 Metal-sensitive transcriptional repressor superfamily D3H41_24565 IPR011541 Nickel/cobalt transporter, high-affinity D3H41_24570 IPR003660 HAMP domain D3H41_24570 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain D3H41_24570 IPR004090 Chemotaxis methyl-accepting receptor D3H41_24570 IPR033479 Double Cache domain 1 D3H41_24570 IPR029151 Periplasmic sensor-like domain superfamily D3H41_24570 IPR000727 Target SNARE coiled-coil homology domain D3H41_24575 IPR000847 Transcription regulator HTH, LysR D3H41_24575 IPR036390 Winged helix DNA-binding domain superfamily D3H41_24575 IPR005119 LysR, substrate-binding D3H41_24575 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_24580 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal D3H41_24580 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit D3H41_24580 IPR029045 ClpP/crotonase-like domain superfamily D3H41_24580 IPR034733 Acetyl-CoA carboxylase D3H41_24580 IPR041010 Acetyl-coA carboxylase zinc finger domain D3H41_24590 IPR007280 Peptidase, C-terminal, archaeal/bacterial D3H41_24590 IPR002169 Peptidase M9A/M9B, collagenase, bacterial D3H41_24590 IPR013661 Peptidase M9, collagenase, N-terminal domain D3H41_24600 IPR029032 AhpD-like D3H41_24600 IPR003779 Carboxymuconolactone decarboxylase-like D3H41_24600 IPR012788 4-carboxymuconolactone decarboxylase D3H41_24605 IPR009061 Putative DNA-binding domain superfamily D3H41_24605 IPR000551 MerR-type HTH domain D3H41_24610 IPR006046 Alpha amylase D3H41_24610 IPR017853 Glycoside hydrolase superfamily D3H41_24610 IPR006047 Glycosyl hydrolase, family 13, catalytic domain D3H41_24625 IPR003148 Regulator of K+ conductance, N-terminal D3H41_24625 IPR036291 NAD(P)-binding domain superfamily D3H41_24625 IPR038770 Sodium/solute symporter superfamily D3H41_24625 IPR006036 Potassium uptake protein TrkA D3H41_24625 IPR023941 Glutathione-regulated potassium-efflux system protein KefC D3H41_24625 IPR004771 K+/H+ exchanger D3H41_24625 IPR006153 Cation/H+ exchanger D3H41_24630 IPR029039 Flavoprotein-like superfamily D3H41_24630 IPR003680 Flavodoxin-like fold D3H41_24635 IPR006016 UspA D3H41_24635 IPR006015 Universal stress protein A family D3H41_24635 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D3H41_24640 IPR003593 AAA+ ATPase domain D3H41_24640 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_24640 IPR017871 ABC transporter, conserved site D3H41_24640 IPR003439 ABC transporter-like D3H41_24640 IPR032781 ABC-transporter extension domain D3H41_24640 IPR032524 ABC transporter Uup, C-terminal D3H41_24640 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily D3H41_24645 IPR029058 Alpha/Beta hydrolase fold D3H41_24645 IPR002471 Peptidase S9, serine active site D3H41_24645 IPR023302 Peptidase S9A, N-terminal domain D3H41_24645 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain D3H41_24645 IPR002470 Peptidase S9A, prolyl oligopeptidase D3H41_24655 IPR022824 Multidrug resistance protein MdtA D3H41_24655 IPR006143 RND efflux pump, membrane fusion protein D3H41_24655 IPR039562 Membrane fusion protein, biotin-lipoyl like domain D3H41_24660 IPR001036 Acriflavin resistance protein D3H41_24660 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 D3H41_24660 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D3H41_24675 IPR000182 GNAT domain D3H41_24675 IPR016181 Acyl-CoA N-acyltransferase D3H41_24685 IPR029787 Nucleotide cyclase D3H41_24685 IPR033416 Periplasmic sensor domain CHASE7 D3H41_24685 IPR000160 GGDEF domain D3H41_24690 IPR012338 Beta-lactamase/transpeptidase-like D3H41_24690 IPR000871 Beta-lactamase, class-A D3H41_24690 IPR023650 Beta-lactamase, class-A active site D3H41_24700 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D3H41_24700 IPR001036 Acriflavin resistance protein D3H41_24700 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA D3H41_24705 IPR006143 RND efflux pump, membrane fusion protein D3H41_24705 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain D3H41_24720 IPR006656 Molybdopterin oxidoreductase D3H41_24720 IPR006657 Molybdopterin dinucleotide-binding domain D3H41_24720 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding D3H41_24720 IPR006478 Formate dehydrogenase, alpha subunit D3H41_24720 IPR041924 Formate dehydrogenase H, N-terminal D3H41_24720 IPR009010 Aspartate decarboxylase-like domain superfamily D3H41_24720 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site D3H41_24720 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain D3H41_24720 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain D3H41_24720 IPR036010 2Fe-2S ferredoxin-like superfamily D3H41_24720 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain D3H41_24730 IPR000412 ABC-2 transporter D3H41_24735 IPR017871 ABC transporter, conserved site D3H41_24735 IPR003439 ABC transporter-like D3H41_24735 IPR003593 AAA+ ATPase domain D3H41_24735 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_24745 IPR003719 Phenazine biosynthesis PhzF protein D3H41_24750 IPR008914 Phosphatidylethanolamine-binding protein D3H41_24750 IPR005247 YbhB/YbcL D3H41_24750 IPR036610 PEBP-like superfamily D3H41_24760 IPR004706 Arsenical-resistance protein Acr3 D3H41_24760 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 D3H41_24760 IPR038770 Sodium/solute symporter superfamily D3H41_24775 IPR002577 Helix-turn-helix, HxlR type D3H41_24775 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_24775 IPR036390 Winged helix DNA-binding domain superfamily D3H41_24795 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_24795 IPR036390 Winged helix DNA-binding domain superfamily D3H41_24795 IPR005119 LysR, substrate-binding D3H41_24795 IPR000847 Transcription regulator HTH, LysR D3H41_24800 IPR023210 NADP-dependent oxidoreductase domain D3H41_24800 IPR036812 NADP-dependent oxidoreductase domain superfamily D3H41_24800 IPR020471 Aldo/keto reductase D3H41_24805 IPR005624 Haem-degrading D3H41_24805 IPR038084 GlcG-like domain superfamily D3H41_24825 IPR013059 Tryptophan/tyrosine transporter D3H41_24825 IPR018227 Amino acid/polyamine transporter 2 D3H41_24835 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain D3H41_24835 IPR029151 Periplasmic sensor-like domain superfamily D3H41_24835 IPR033479 Double Cache domain 1 D3H41_24835 IPR003660 HAMP domain D3H41_24865 IPR011055 Duplicated hybrid motif D3H41_24865 IPR018392 LysM domain D3H41_24865 IPR013731 Opacity-associated protein A, N-terminal D3H41_24865 IPR016047 Peptidase M23 D3H41_24870 IPR035919 EAL domain superfamily D3H41_24870 IPR000160 GGDEF domain D3H41_24870 IPR029787 Nucleotide cyclase D3H41_24870 IPR001610 PAC motif D3H41_24870 IPR035965 PAS domain superfamily D3H41_24870 IPR000700 PAS-associated, C-terminal D3H41_24870 IPR013655 PAS fold-3 D3H41_24870 IPR013656 PAS fold-4 D3H41_24870 IPR001633 EAL domain D3H41_24870 IPR000014 PAS domain D3H41_24875 IPR036390 Winged helix DNA-binding domain superfamily D3H41_24875 IPR005119 LysR, substrate-binding D3H41_24875 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_24875 IPR000847 Transcription regulator HTH, LysR D3H41_24880 IPR011701 Major facilitator superfamily D3H41_24880 IPR036259 MFS transporter superfamily D3H41_24880 IPR020846 Major facilitator superfamily domain D3H41_24880 IPR004734 Multidrug resistance protein D3H41_24895 IPR036249 Thioredoxin-like superfamily D3H41_24895 IPR011900 Glutaredoxin, GrxC D3H41_24895 IPR014025 Glutaredoxin subgroup D3H41_24895 IPR011767 Glutaredoxin active site D3H41_24895 IPR002109 Glutaredoxin D3H41_24900 IPR000620 EamA domain D3H41_24905 IPR001702 Porin, Gram-negative type D3H41_24905 IPR013793 Porin, Gram-negative type, conserved site D3H41_24905 IPR023614 Porin domain superfamily D3H41_24905 IPR001897 Porin, gammaproteobacterial D3H41_24905 IPR033900 Porin domain, Gram-negative type D3H41_24915 IPR011234 Fumarylacetoacetase-like, C-terminal D3H41_24915 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily D3H41_24935 IPR001123 Amino acid exporter protein, LeuE-type D3H41_24935 IPR004778 Homoserine/Threonine efflux protein D3H41_24945 IPR005841 Alpha-D-phosphohexomutase superfamily D3H41_24945 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III D3H41_24945 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily D3H41_24945 IPR005843 Alpha-D-phosphohexomutase, C-terminal D3H41_24945 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III D3H41_24945 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II D3H41_24945 IPR016066 Alpha-D-phosphohexomutase, conserved site D3H41_24945 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I D3H41_24950 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain D3H41_24950 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily D3H41_24950 IPR014222 Cytochrome c oxidase, subunit II D3H41_24950 IPR008972 Cupredoxin D3H41_24950 IPR001505 Copper centre Cu(A) D3H41_24950 IPR034210 Cytochrome c oxidase subunit 2, C-terminal D3H41_24950 IPR002429 Cytochrome c oxidase subunit II-like C-terminal D3H41_24955 IPR023616 Cytochrome c oxidase-like, subunit I domain D3H41_24955 IPR036927 Cytochrome c oxidase-like, subunit I superfamily D3H41_24955 IPR000883 Cytochrome c oxidase subunit I D3H41_24955 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site D3H41_24955 IPR033944 Cytochrome c oxidase subunit I domain D3H41_24955 IPR014241 Cytochrome c oxidase, subunit I bacterial type D3H41_24960 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 D3H41_24960 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily D3H41_24965 IPR000298 Cytochrome c oxidase subunit III-like D3H41_24965 IPR035973 Cytochrome c oxidase subunit III-like superfamily D3H41_24965 IPR033945 Cytochrome c oxidase subunit III domain D3H41_24965 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle D3H41_24965 IPR024791 Cytochrome c oxidase subunit III D3H41_24985 IPR003780 COX15/CtaA family D3H41_24985 IPR023754 Heme A synthase, type 2 D3H41_24990 IPR006369 Protohaem IX farnesyltransferase D3H41_24990 IPR000537 UbiA prenyltransferase family D3H41_24990 IPR030470 UbiA prenyltransferase conserved site D3H41_24995 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain D3H41_24995 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal D3H41_24995 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily D3H41_25005 IPR036737 OmpA-like domain superfamily D3H41_25005 IPR006690 Outer membrane protein, OmpA-like, conserved site D3H41_25005 IPR006665 OmpA-like domain D3H41_25005 IPR006664 Outer membrane protein, bacterial D3H41_25005 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel D3H41_25005 IPR008722 Outer membrane porin F, N-terminal D3H41_25005 IPR028974 TSP type-3 repeat D3H41_25025 IPR019844 Cold-shock (CSD) domain D3H41_25025 IPR012340 Nucleic acid-binding, OB-fold D3H41_25025 IPR002059 Cold-shock protein, DNA-binding D3H41_25025 IPR011129 Cold shock domain D3H41_25025 IPR012156 Cold shock, CspA D3H41_25030 IPR005589 Alternative ribosome-rescue factor A D3H41_25035 IPR029787 Nucleotide cyclase D3H41_25035 IPR000160 GGDEF domain D3H41_25040 IPR000943 RNA polymerase sigma-70 D3H41_25040 IPR009042 RNA polymerase sigma-70 region 1.2 D3H41_25040 IPR007627 RNA polymerase sigma-70 region 2 D3H41_25040 IPR013324 RNA polymerase sigma factor, region 3/4-like D3H41_25040 IPR007630 RNA polymerase sigma-70 region 4 D3H41_25040 IPR013325 RNA polymerase sigma factor, region 2 D3H41_25040 IPR014284 RNA polymerase sigma-70 like domain D3H41_25040 IPR012761 RNA polymerase sigma factor RpoS D3H41_25040 IPR007624 RNA polymerase sigma-70 region 3 D3H41_25040 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_25050 IPR011527 ABC transporter type 1, transmembrane domain D3H41_25050 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_25050 IPR017871 ABC transporter, conserved site D3H41_25050 IPR003439 ABC transporter-like D3H41_25050 IPR036640 ABC transporter type 1, transmembrane domain superfamily D3H41_25050 IPR003593 AAA+ ATPase domain D3H41_25055 IPR003593 AAA+ ATPase domain D3H41_25055 IPR011527 ABC transporter type 1, transmembrane domain D3H41_25055 IPR036640 ABC transporter type 1, transmembrane domain superfamily D3H41_25055 IPR003439 ABC transporter-like D3H41_25055 IPR017871 ABC transporter, conserved site D3H41_25055 IPR011917 ABC transporter, lipid A export, MsbA D3H41_25055 IPR027417 P-loop containing nucleoside triphosphate hydrolase D3H41_25055 IPR039421 Type I protein exporter D3H41_25060 IPR003423 Outer membrane efflux protein D3H41_25060 IPR010130 Type I secretion outer membrane protein, TolC D3H41_25065 IPR011006 CheY-like superfamily D3H41_25065 IPR003594 Histidine kinase/HSP90-like ATPase D3H41_25065 IPR001789 Signal transduction response regulator, receiver domain D3H41_25065 IPR004358 Signal transduction histidine kinase-related protein, C-terminal D3H41_25065 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D3H41_25065 IPR005467 Histidine kinase domain D3H41_25065 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain D3H41_25065 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily D3H41_25070 IPR006144 Secretion protein HlyD, conserved site D3H41_25070 IPR039562 Membrane fusion protein, biotin-lipoyl like domain D3H41_25070 IPR010129 Type I secretion membrane fusion protein, HlyD family D3H41_25090 IPR003660 HAMP domain D3H41_25090 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain D3H41_25090 IPR000727 Target SNARE coiled-coil homology domain D3H41_25090 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain D3H41_25090 IPR004090 Chemotaxis methyl-accepting receptor D3H41_25095 IPR002177 DNA-binding protein Dps D3H41_25095 IPR023188 DNA-binding protein Dps, conserved site D3H41_25095 IPR012347 Ferritin-like D3H41_25095 IPR009078 Ferritin-like superfamily D3H41_25095 IPR008331 Ferritin/DPS protein domain D3H41_25105 IPR012938 Glucose/Sorbosone dehydrogenase D3H41_25105 IPR011042 Six-bladed beta-propeller, TolB-like D3H41_25105 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase D3H41_25110 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA D3H41_25110 IPR018211 Alcohol dehydrogenase, iron-type, conserved site D3H41_25110 IPR039697 Iron-type alcohol dehydrogenase-like D3H41_25115 IPR029062 Class I glutamine amidotransferase-like D3H41_25115 IPR026041 Glyoxalase ElbB D3H41_25120 IPR000620 EamA domain D3H41_25130 IPR036390 Winged helix DNA-binding domain superfamily D3H41_25130 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_25130 IPR000847 Transcription regulator HTH, LysR D3H41_25130 IPR005119 LysR, substrate-binding D3H41_25135 IPR010233 Ubiquinone biosynthesis O-methyltransferase D3H41_25135 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D3H41_25140 IPR005914 Acetoacetyl-CoA synthase D3H41_25140 IPR025110 AMP-binding enzyme, C-terminal domain D3H41_25140 IPR020845 AMP-binding, conserved site D3H41_25140 IPR042099 AMP-dependent synthetase-like superfamily D3H41_25140 IPR000873 AMP-dependent synthetase/ligase D3H41_25145 IPR001273 Aromatic amino acid hydroxylase D3H41_25145 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily D3H41_25145 IPR019774 Aromatic amino acid hydroxylase, C-terminal D3H41_25145 IPR005960 Phenylalanine-4-hydroxylase, monomeric form D3H41_25145 IPR036951 Aromatic amino acid hydroxylase superfamily D3H41_25145 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site D3H41_25150 IPR001533 Pterin 4 alpha carbinolamine dehydratase D3H41_25150 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily D3H41_25170 IPR024530 Putative quorum-sensing-regulated virulence factor D3H41_25180 IPR001123 Amino acid exporter protein, LeuE-type D3H41_25185 IPR011711 GntR, C-terminal D3H41_25185 IPR000524 Transcription regulator HTH, GntR D3H41_25185 IPR036388 Winged helix-like DNA-binding domain superfamily D3H41_25185 IPR036390 Winged helix DNA-binding domain superfamily D3H41_25185 IPR008920 Transcription regulator FadR/GntR, C-terminal D3H41_25200 IPR004777 L-lysine exporter/arginine exporter D3H41_25200 IPR023445 Arginine exporter protein ArgO, enterobacteria D3H41_25200 IPR001123 Amino acid exporter protein, LeuE-type