locus-tag class description VIBNI_A0001 PF00308 Bacterial dnaA protein VIBNI_A0001 PF08299 Bacterial dnaA protein helix-turn-helix VIBNI_A0001 PF11638 DnaA N-terminal domain VIBNI_A0002 PF02768 DNA polymerase III beta subunit, C-terminal domain VIBNI_A0002 PF00712 DNA polymerase III beta subunit, N-terminal domain VIBNI_A0002 PF02767 DNA polymerase III beta subunit, central domain VIBNI_A0003 PF02463 RecF/RecN/SMC N terminal domain VIBNI_A0004 PF00204 DNA gyrase B VIBNI_A0004 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_A0004 PF00986 DNA gyrase B subunit, carboxyl terminus VIBNI_A0004 PF18053 DNA gyrase B subunit insert domain VIBNI_A0004 PF01751 Toprim domain VIBNI_A0005 PF00011 Hsp20/alpha crystallin family VIBNI_A0006 PF00155 Aminotransferase class I and II VIBNI_A0011 PF02091 Glycyl-tRNA synthetase alpha subunit VIBNI_A0012 PF01169 Uncharacterized protein family UPF0016 VIBNI_A0014 PF01206 Sulfurtransferase TusA VIBNI_A0015 PF03466 LysR substrate binding domain VIBNI_A0015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_A0016 PF08240 Alcohol dehydrogenase GroES-like domain VIBNI_A0016 PF00107 Zinc-binding dehydrogenase VIBNI_A0017 PF12706 Beta-lactamase superfamily domain VIBNI_A0019 PF07969 Amidohydrolase family VIBNI_A0020 PF00005 ABC transporter VIBNI_A0021 PF00005 ABC transporter VIBNI_A0022 PF06007 Phosphonate metabolism protein PhnJ VIBNI_A0023 PF05861 Bacterial phosphonate metabolism protein (PhnI) VIBNI_A0024 PF05845 Bacterial phosphonate metabolism protein (PhnH) VIBNI_A0025 PF06754 Phosphonate metabolism protein PhnG VIBNI_A0026 PF00392 Bacterial regulatory proteins, gntR family VIBNI_A0026 PF07702 UTRA domain VIBNI_A0027 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_A0029 PF00005 ABC transporter VIBNI_A0031 PF00108 Thiolase, N-terminal domain VIBNI_A0031 PF02803 Thiolase, C-terminal domain VIBNI_A0032 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VIBNI_A0032 PF00378 Enoyl-CoA hydratase/isomerase VIBNI_A0032 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VIBNI_A0033 PF09186 Domain of unknown function (DUF1949) VIBNI_A0033 PF01205 Uncharacterized protein family UPF0029 VIBNI_A0034 PF02386 Cation transport protein VIBNI_A0035 PF12724 Flavodoxin domain VIBNI_A0043 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBNI_A0043 PF12729 Four helix bundle sensory module for signal transduction VIBNI_A0043 PF00672 HAMP domain VIBNI_A0044 PF01464 Transglycosylase SLT domain VIBNI_A0044 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain VIBNI_A0045 PF04362 Bacterial Fe(2+) trafficking VIBNI_A0046 PF00633 Helix-hairpin-helix motif VIBNI_A0046 PF00730 HhH-GPD superfamily base excision DNA repair protein VIBNI_A0046 PF14815 NUDIX domain VIBNI_A0047 PF02390 Putative methyltransferase VIBNI_A0049 PF04055 Radical SAM superfamily VIBNI_A0049 PF06969 HemN C-terminal domain VIBNI_A0050 PF01725 Ham1 family VIBNI_A0052 PF02594 Uncharacterised ACR, YggU family COG1872 VIBNI_A0053 PF02325 YGGT family VIBNI_A0054 PF03807 NADP oxidoreductase coenzyme F420-dependent VIBNI_A0054 PF14748 Pyrroline-5-carboxylate reductase dimerisation VIBNI_A0055 PF01168 Alanine racemase, N-terminal domain VIBNI_A0058 PF00437 Type II/IV secretion system protein VIBNI_A0059 PF03652 Holliday junction resolvase VIBNI_A0060 PF02622 Uncharacterized ACR, COG1678 VIBNI_A0061 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain VIBNI_A0061 PF02951 Prokaryotic glutathione synthetase, N-terminal domain VIBNI_A0062 PF04452 RNA methyltransferase VIBNI_A0063 PF04231 Endonuclease I VIBNI_A0064 PF17283 SprT-like zinc ribbon domain VIBNI_A0064 PF10263 SprT-like family VIBNI_A0067 PF07685 CobB/CobQ-like glutamine amidotransferase domain VIBNI_A0067 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain VIBNI_A0068 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VIBNI_A0069 PF01077 Nitrite and sulphite reductase 4Fe-4S domain VIBNI_A0069 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VIBNI_A0071 PF01890 Cobalamin synthesis G C-terminus VIBNI_A0071 PF11761 Cobalamin biosynthesis central region VIBNI_A0071 PF11760 Cobalamin synthesis G N-terminal VIBNI_A0073 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VIBNI_A0074 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VIBNI_A0075 PF02570 Precorrin-8X methylmutase VIBNI_A0076 PF01888 CbiD VIBNI_A0078 PF01032 FecCD transport family VIBNI_A0079 PF01497 Periplasmic binding protein VIBNI_A0080 PF00005 ABC transporter VIBNI_A0081 PF00438 S-adenosylmethionine synthetase, N-terminal domain VIBNI_A0081 PF02772 S-adenosylmethionine synthetase, central domain VIBNI_A0081 PF02773 S-adenosylmethionine synthetase, C-terminal domain VIBNI_A0082 PF02779 Transketolase, pyrimidine binding domain VIBNI_A0082 PF02780 Transketolase, C-terminal domain VIBNI_A0082 PF00456 Transketolase, thiamine diphosphate binding domain VIBNI_A0084 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VIBNI_A0084 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VIBNI_A0085 PF00162 Phosphoglycerate kinase VIBNI_A0086 PF01116 Fructose-bisphosphate aldolase class-II VIBNI_A0087 PF05552 Conserved TM helix VIBNI_A0087 PF00924 Mechanosensitive ion channel VIBNI_A0088 PF01810 LysE type translocator VIBNI_A0089 PF03466 LysR substrate binding domain VIBNI_A0089 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_A0091 PF01842 ACT domain VIBNI_A0091 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VIBNI_A0091 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VIBNI_A0093 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) VIBNI_A0094 PF01812 5-formyltetrahydrofolate cyclo-ligase family VIBNI_A0095 PF05164 Cell division protein ZapA VIBNI_A0096 PF03695 Uncharacterised protein family (UPF0149) VIBNI_A0097 PF01494 FAD binding domain VIBNI_A0098 PF01494 FAD binding domain VIBNI_A0102 PF01571 Aminomethyltransferase folate-binding domain VIBNI_A0104 PF03937 Flavinator of succinate dehydrogenase VIBNI_A0106 PF00890 FAD binding domain VIBNI_A0106 PF02910 Fumarate reductase flavoprotein C-term VIBNI_A0108 PF04542 Sigma-70 region 2 VIBNI_A0108 PF08281 Sigma-70, region 4 VIBNI_A0109 PF03872 Anti sigma-E protein RseA, N-terminal domain VIBNI_A0109 PF03873 Anti sigma-E protein RseA, C-terminal domain VIBNI_A0110 PF03888 MucB/RseB N-terminal domain VIBNI_A0110 PF17188 MucB/RseB C-terminal domain VIBNI_A0112 PF00009 Elongation factor Tu GTP binding domain VIBNI_A0112 PF06421 GTP-binding protein LepA C-terminus VIBNI_A0112 PF03144 Elongation factor Tu domain 2 VIBNI_A0112 PF00679 Elongation factor G C-terminus VIBNI_A0113 PF10502 Signal peptidase, peptidase S26 VIBNI_A0114 PF14622 Ribonuclease-III-like VIBNI_A0114 PF00035 Double-stranded RNA binding motif VIBNI_A0115 PF07650 KH domain VIBNI_A0115 PF01926 50S ribosome-binding GTPase VIBNI_A0116 PF11967 Recombination protein O N terminal VIBNI_A0116 PF02565 Recombination protein O C terminal VIBNI_A0117 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ VIBNI_A0118 PF01648 4'-phosphopantetheinyl transferase superfamily VIBNI_A0121 PF00563 EAL domain VIBNI_A0121 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_A0121 PF03707 Bacterial signalling protein N terminal repeat VIBNI_A0122 PF00072 Response regulator receiver domain VIBNI_A0122 PF01627 Hpt domain VIBNI_A0122 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_A0122 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_A0122 PF00672 HAMP domain VIBNI_A0122 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VIBNI_A0125 PF01938 TRAM domain VIBNI_A0125 PF05958 tRNA (Uracil-5-)-methyltransferase VIBNI_A0126 PF02824 TGS domain VIBNI_A0126 PF04607 Region found in RelA / SpoT proteins VIBNI_A0126 PF13291 ACT domain VIBNI_A0127 PF03819 MazG nucleotide pyrophosphohydrolase domain VIBNI_A0128 PF06418 CTP synthase N-terminus VIBNI_A0128 PF00117 Glutamine amidotransferase class-I VIBNI_A0129 PF00113 Enolase, C-terminal TIM barrel domain VIBNI_A0129 PF03952 Enolase, N-terminal domain VIBNI_A0130 PF04977 Septum formation initiator VIBNI_A0131 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase VIBNI_A0132 PF02542 YgbB family VIBNI_A0133 PF01142 tRNA pseudouridine synthase D (TruD) VIBNI_A0134 PF01975 Survival protein SurE VIBNI_A0136 PF01551 Peptidase family M23 VIBNI_A0136 PF01476 LysM domain VIBNI_A0137 PF00140 Sigma-70 factor, region 1.2 VIBNI_A0137 PF04542 Sigma-70 region 2 VIBNI_A0137 PF04539 Sigma-70 region 3 VIBNI_A0137 PF04545 Sigma-70, region 4 VIBNI_A0139 PF01624 MutS domain I VIBNI_A0139 PF05188 MutS domain II VIBNI_A0139 PF05192 MutS domain III VIBNI_A0139 PF05190 MutS family domain IV VIBNI_A0139 PF00488 MutS domain V VIBNI_A0142 PF05496 Holliday junction DNA helicase RuvB P-loop domain VIBNI_A0142 PF05491 RuvB C-terminal winged helix domain VIBNI_A0142 PF17864 RuvB AAA lid domain VIBNI_A0144 PF05816 Toxic anion resistance protein (TelA) VIBNI_A0145 PF02464 Competence-damaged protein VIBNI_A0147 PF00154 recA bacterial DNA recombination protein VIBNI_A0148 PF02631 RecX family VIBNI_A0149 PF01411 tRNA synthetases class II (A) VIBNI_A0149 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VIBNI_A0149 PF02272 DHHA1 domain VIBNI_A0150 PF00696 Amino acid kinase family VIBNI_A0150 PF01842 ACT domain VIBNI_A0150 PF13840 ACT domain VIBNI_A0151 PF02599 Global regulator protein family VIBNI_A0153 PF00364 Biotin-requiring enzyme VIBNI_A0153 PF02436 Conserved carboxylase domain VIBNI_A0153 PF00682 HMGL-like VIBNI_A0154 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit VIBNI_A0156 PF09335 SNARE associated Golgi protein VIBNI_A0157 PF05193 Peptidase M16 inactive domain VIBNI_A0157 PF00675 Insulinase (Peptidase family M16) VIBNI_A0158 PF04262 Glutamate-cysteine ligase VIBNI_A0161 PF07350 Protein of unknown function (DUF1479) VIBNI_A0162 PF01595 Cyclin M transmembrane N-terminal domain VIBNI_A0162 PF03471 Transporter associated domain VIBNI_A0162 PF00571 CBS domain VIBNI_A0163 PF01578 Cytochrome C assembly protein VIBNI_A0164 PF02881 SRP54-type protein, helical bundle domain VIBNI_A0164 PF00448 SRP54-type protein, GTPase domain VIBNI_A0164 PF02978 Signal peptide binding domain VIBNI_A0165 PF00886 Ribosomal protein S16 VIBNI_A0166 PF01782 RimM N-terminal domain VIBNI_A0166 PF05239 PRC-barrel domain VIBNI_A0168 PF01245 Ribosomal protein L19 VIBNI_A0169 PF00293 NUDIX domain VIBNI_A0170 PF03884 DNA gyrase inhibitor YacG VIBNI_A0171 PF07072 Cell division protein VIBNI_A0172 PF01121 Dephospho-CoA kinase VIBNI_A0173 PF06750 Bacterial Peptidase A24 N-terminal domain VIBNI_A0173 PF01478 Type IV leader peptidase family VIBNI_A0174 PF00482 Type II secretion system (T2SS), protein F VIBNI_A0175 PF00437 Type II/IV secretion system protein VIBNI_A0175 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain VIBNI_A0176 PF07963 Prokaryotic N-terminal methylation motif VIBNI_A0177 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain VIBNI_A0177 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain VIBNI_A0178 PF01510 N-acetylmuramoyl-L-alanine amidase VIBNI_A0180 PF07729 FCD domain VIBNI_A0180 PF00392 Bacterial regulatory proteins, gntR family VIBNI_A0181 PF17831 Pyruvate dehydrogenase E1 component middle domain VIBNI_A0181 PF00456 Transketolase, thiamine diphosphate binding domain VIBNI_A0182 PF02817 e3 binding domain VIBNI_A0182 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VIBNI_A0182 PF00364 Biotin-requiring enzyme VIBNI_A0183 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VIBNI_A0183 PF07992 Pyridine nucleotide-disulphide oxidoreductase VIBNI_A0184 PF00440 Bacterial regulatory proteins, tetR family VIBNI_A0185 PF00156 Phosphoribosyl transferase domain VIBNI_A0186 PF01966 HD domain VIBNI_A0186 PF01743 Poly A polymerase head domain VIBNI_A0186 PF12627 Probable RNA and SrmB- binding site of polymerase A VIBNI_A0187 PF13401 AAA domain VIBNI_A0187 PF01471 Putative peptidoglycan binding domain VIBNI_A0189 PF08239 Bacterial SH3 domain VIBNI_A0190 PF01384 Phosphate transporter family VIBNI_A0191 PF01865 Protein of unknown function DUF47 VIBNI_A0192 PF01928 CYTH domain VIBNI_A0193 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBNI_A0193 PF00672 HAMP domain VIBNI_A0193 PF02743 Cache domain VIBNI_A0194 PF03710 Glutamate-ammonia ligase adenylyltransferase VIBNI_A0194 PF08335 GlnD PII-uridylyltransferase VIBNI_A0196 PF02321 Outer membrane efflux protein VIBNI_A0197 PF00293 NUDIX domain VIBNI_A0198 PF06853 Protein of unknown function (DUF1249) VIBNI_A0199 PF00149 Calcineurin-like phosphoesterase VIBNI_A0200 PF05728 Uncharacterised protein family (UPF0227) VIBNI_A0201 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_A0201 PF00204 DNA gyrase B VIBNI_A0201 PF00986 DNA gyrase B subunit, carboxyl terminus VIBNI_A0201 PF01751 Toprim domain VIBNI_A0202 PF00521 DNA gyrase/topoisomerase IV, subunit A VIBNI_A0202 PF03989 DNA gyrase C-terminal domain, beta-propeller VIBNI_A0203 PF13180 PDZ domain VIBNI_A0204 PF00595 PDZ domain VIBNI_A0205 PF06295 Protein of unknown function (DUF1043) VIBNI_A0206 PF03969 AFG1-like ATPase VIBNI_A0207 PF00572 Ribosomal protein L13 VIBNI_A0208 PF00380 Ribosomal protein S9/S16 VIBNI_A0209 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal VIBNI_A0209 PF00355 Rieske [2Fe-2S] domain VIBNI_A0210 PF00032 Cytochrome b(C-terminal)/b6/petD VIBNI_A0210 PF00033 Cytochrome b/b6/petB VIBNI_A0211 PF02167 Cytochrome C1 family VIBNI_A0212 PF02798 Glutathione S-transferase, N-terminal domain VIBNI_A0212 PF00043 Glutathione S-transferase, C-terminal domain VIBNI_A0213 PF04386 Stringent starvation protein B VIBNI_A0214 PF04972 BON domain VIBNI_A0215 PF13580 SIS domain VIBNI_A0216 PF02021 Uncharacterised protein family UPF0102 VIBNI_A0217 PF04348 LppC putative lipoprotein VIBNI_A0218 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VIBNI_A0221 PF01795 MraW methylase family VIBNI_A0222 PF04999 Cell division protein FtsL VIBNI_A0223 PF03717 Penicillin-binding Protein dimerisation domain VIBNI_A0223 PF00905 Penicillin binding protein transpeptidase domain VIBNI_A0224 PF08245 Mur ligase middle domain VIBNI_A0224 PF01225 Mur ligase family, catalytic domain VIBNI_A0224 PF02875 Mur ligase family, glutamate ligase domain VIBNI_A0225 PF02875 Mur ligase family, glutamate ligase domain VIBNI_A0225 PF01225 Mur ligase family, catalytic domain VIBNI_A0225 PF08245 Mur ligase middle domain VIBNI_A0228 PF01098 Cell cycle protein VIBNI_A0230 PF02875 Mur ligase family, glutamate ligase domain VIBNI_A0230 PF08245 Mur ligase middle domain VIBNI_A0230 PF01225 Mur ligase family, catalytic domain VIBNI_A0231 PF08478 POTRA domain, FtsQ-type VIBNI_A0231 PF03799 Cell division protein FtsQ VIBNI_A0232 PF02491 SHS2 domain inserted in FTSA VIBNI_A0233 PF00091 Tubulin/FtsZ family, GTPase domain VIBNI_A0233 PF12327 FtsZ family, C-terminal domain VIBNI_A0237 PF07516 SecA Wing and Scaffold domain VIBNI_A0237 PF01043 SecA preprotein cross-linking domain VIBNI_A0237 PF02810 SEC-C motif VIBNI_A0237 PF07517 SecA DEAD-like domain VIBNI_A0238 PF01113 Dihydrodipicolinate reductase, N-terminus VIBNI_A0238 PF05173 Dihydrodipicolinate reductase, C-terminus VIBNI_A0239 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain VIBNI_A0239 PF00117 Glutamine amidotransferase class-I VIBNI_A0240 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain VIBNI_A0240 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VIBNI_A0240 PF02142 MGS-like domain VIBNI_A0243 PF04227 Indigoidine synthase A like protein VIBNI_A0244 PF00294 pfkB family carbohydrate kinase VIBNI_A0245 PF00005 ABC transporter VIBNI_A0246 PF10282 Lactonase, 7-bladed beta-propeller VIBNI_A0247 PF03737 Aldolase/RraA VIBNI_A0251 PF02653 Branched-chain amino acid transport system / permease component VIBNI_A0252 PF00005 ABC transporter VIBNI_A0253 PF02653 Branched-chain amino acid transport system / permease component VIBNI_A0255 PF02515 CoA-transferase family III VIBNI_A0259 PF01042 Endoribonuclease L-PSP VIBNI_A0260 PF03222 Tryptophan/tyrosine permease family VIBNI_A0261 PF01212 Beta-eliminating lyase VIBNI_A0265 PF03458 UPF0126 domain VIBNI_A0266 PF01497 Periplasmic binding protein VIBNI_A0268 PF01048 Phosphorylase superfamily VIBNI_A0269 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VIBNI_A0269 PF00367 phosphotransferase system, EIIB VIBNI_A0269 PF02378 Phosphotransferase system, EIIC VIBNI_A0271 PF01547 Bacterial extracellular solute-binding protein VIBNI_A0272 PF18415 Histidine kinase receptor ArcB trans-membrane domain VIBNI_A0272 PF01627 Hpt domain VIBNI_A0272 PF00989 PAS fold VIBNI_A0272 PF00072 Response regulator receiver domain VIBNI_A0272 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_A0272 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_A0273 PF00072 Response regulator receiver domain VIBNI_A0273 PF00486 Transcriptional regulatory protein, C terminal VIBNI_A0275 PF00347 Ribosomal protein L6 VIBNI_A0276 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VIBNI_A0276 PF07992 Pyridine nucleotide-disulphide oxidoreductase VIBNI_A0277 PF00310 Glutamine amidotransferases class-II VIBNI_A0277 PF04898 Glutamate synthase central domain VIBNI_A0277 PF01645 Conserved region in glutamate synthase VIBNI_A0277 PF01493 GXGXG motif VIBNI_A0278 PF07992 Pyridine nucleotide-disulphide oxidoreductase VIBNI_A0278 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VIBNI_A0279 PF04898 Glutamate synthase central domain VIBNI_A0279 PF00310 Glutamine amidotransferases class-II VIBNI_A0279 PF01645 Conserved region in glutamate synthase VIBNI_A0279 PF01493 GXGXG motif VIBNI_A0280 PF04055 Radical SAM superfamily VIBNI_A0280 PF16199 Radical_SAM C-terminal domain VIBNI_A0281 PF00360 Phytochrome region VIBNI_A0281 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_A0281 PF01590 GAF domain VIBNI_A0281 PF00563 EAL domain VIBNI_A0282 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_A0282 PF18415 Histidine kinase receptor ArcB trans-membrane domain VIBNI_A0282 PF01627 Hpt domain VIBNI_A0282 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_A0282 PF00989 PAS fold VIBNI_A0282 PF00072 Response regulator receiver domain VIBNI_A0284 PF00486 Transcriptional regulatory protein, C terminal VIBNI_A0284 PF00072 Response regulator receiver domain VIBNI_A0286 PF03737 Aldolase/RraA VIBNI_A0288 PF03447 Homoserine dehydrogenase, NAD binding domain VIBNI_A0288 PF00696 Amino acid kinase family VIBNI_A0288 PF01842 ACT domain VIBNI_A0288 PF13840 ACT domain VIBNI_A0288 PF00742 Homoserine dehydrogenase VIBNI_A0289 PF00288 GHMP kinases N terminal domain VIBNI_A0289 PF08544 GHMP kinases C terminal VIBNI_A0290 PF00291 Pyridoxal-phosphate dependent enzyme VIBNI_A0290 PF14821 Threonine synthase N terminus VIBNI_A0292 PF01261 Xylose isomerase-like TIM barrel VIBNI_A0294 PF03167 Uracil DNA glycosylase superfamily VIBNI_A0297 PF01235 Sodium:alanine symporter family VIBNI_A0299 PF13276 HTH-like domain VIBNI_A0299 PF00665 Integrase core domain VIBNI_A0299 PF13333 Integrase core domain VIBNI_A0302 PF01047 MarR family VIBNI_A0302 PF00480 ROK family VIBNI_A0303 PF13416 Bacterial extracellular solute-binding protein VIBNI_A0304 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_A0305 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_A0306 PF00005 ABC transporter VIBNI_A0306 PF08402 TOBE domain VIBNI_A0308 PF03480 Bacterial extracellular solute-binding protein, family 7 VIBNI_A0309 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VIBNI_A0311 PF01380 SIS domain VIBNI_A0311 PF01418 Helix-turn-helix domain, rpiR family VIBNI_A0312 PF00270 DEAD/DEAH box helicase VIBNI_A0312 PF00271 Helicase conserved C-terminal domain VIBNI_A0313 PF05175 Methyltransferase small domain VIBNI_A0315 PF05525 Branched-chain amino acid transport protein VIBNI_A0316 PF00258 Flavodoxin VIBNI_A0317 PF02899 Phage integrase, N-terminal SAM-like domain VIBNI_A0317 PF00589 Phage integrase family VIBNI_A0318 PF13098 Thioredoxin-like domain VIBNI_A0318 PF10411 Disulfide bond isomerase protein N-terminus VIBNI_A0319 PF17768 RecJ OB domain VIBNI_A0319 PF01368 DHH family VIBNI_A0319 PF02272 DHHA1 domain VIBNI_A0320 PF00472 RF-1 domain VIBNI_A0320 PF03462 PCRF domain VIBNI_A0321 PF01336 OB-fold nucleic acid binding domain VIBNI_A0321 PF00152 tRNA synthetases class II (D, K and N) VIBNI_A0322 PF00072 Response regulator receiver domain VIBNI_A0322 PF02954 Bacterial regulatory protein, Fis family VIBNI_A0322 PF00158 Sigma-54 interaction domain VIBNI_A0325 PF00248 Aldo/keto reductase family VIBNI_A0327 PF02976 DNA mismatch repair enzyme MutH VIBNI_A0330 PF02896 PEP-utilising enzyme, TIM barrel domain VIBNI_A0330 PF00391 PEP-utilising enzyme, mobile domain VIBNI_A0330 PF05524 PEP-utilising enzyme, N-terminal VIBNI_A0330 PF01590 GAF domain VIBNI_A0331 PF01925 Sulfite exporter TauE/SafE VIBNI_A0332 PF01790 Prolipoprotein diacylglyceryl transferase VIBNI_A0338 PF00303 Thymidylate synthase VIBNI_A0345 PF01555 DNA methylase VIBNI_A0346 PF13361 UvrD-like helicase C-terminal domain VIBNI_A0346 PF00580 UvrD/REP helicase N-terminal domain VIBNI_A0353 PF02690 Na+/Pi-cotransporter VIBNI_A0354 PF03466 LysR substrate binding domain VIBNI_A0354 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_A0355 PF01022 Bacterial regulatory protein, arsR family VIBNI_A0356 PF01649 Ribosomal protein S20 VIBNI_A0357 PF03023 Lipid II flippase MurJ VIBNI_A0358 PF06574 FAD synthetase VIBNI_A0358 PF01687 Riboflavin kinase VIBNI_A0359 PF06827 Zinc finger found in FPG and IleRS VIBNI_A0359 PF08264 Anticodon-binding domain of tRNA VIBNI_A0359 PF00133 tRNA synthetases class I (I, L, M and V) VIBNI_A0360 PF01252 Signal peptidase (SPase) II VIBNI_A0362 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VIBNI_A0363 PF02401 LytB protein VIBNI_A0364 PF00072 Response regulator receiver domain VIBNI_A0364 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_A0364 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_A0364 PF09308 LuxQ, periplasmic VIBNI_A0365 PF02554 Carbon starvation protein CstA VIBNI_A0370 PF03702 Anhydro-N-acetylmuramic acid kinase VIBNI_A0371 PF00933 Glycosyl hydrolase family 3 N terminal domain VIBNI_A0372 PF00072 Response regulator receiver domain VIBNI_A0372 PF04397 LytTr DNA-binding domain VIBNI_A0373 PF06580 Histidine kinase VIBNI_A0373 PF07694 5TMR of 5TMR-LYT VIBNI_A0374 PF00793 DAHP synthetase I family VIBNI_A0375 PF01817 Chorismate mutase type II VIBNI_A0375 PF02153 Prephenate dehydrogenase VIBNI_A0376 PF01551 Peptidase family M23 VIBNI_A0376 PF04225 Opacity-associated protein A LysM-like domain VIBNI_A0377 PF07238 PilZ domain VIBNI_A0378 PF00005 ABC transporter VIBNI_A0378 PF12848 ABC transporter VIBNI_A0379 PF14718 Soluble lytic murein transglycosylase L domain VIBNI_A0379 PF01464 Transglycosylase SLT domain VIBNI_A0380 PF01371 Trp repressor protein VIBNI_A0381 PF01931 Protein of unknown function DUF84 VIBNI_A0382 PF00563 EAL domain VIBNI_A0382 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_A0383 PF01817 Chorismate mutase type II VIBNI_A0383 PF00800 Prephenate dehydratase VIBNI_A0384 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein VIBNI_A0385 PF13525 Outer membrane lipoprotein VIBNI_A0386 PF00849 RNA pseudouridylate synthase VIBNI_A0386 PF01479 S4 domain VIBNI_A0389 PF02861 Clp amino terminal domain, pathogenicity island component VIBNI_A0389 PF00004 ATPase family associated with various cellular activities (AAA) VIBNI_A0389 PF10431 C-terminal, D2-small domain, of ClpB protein VIBNI_A0389 PF07724 AAA domain (Cdc48 subfamily) VIBNI_A0389 PF17871 AAA lid domain VIBNI_A0394 PF01618 MotA/TolQ/ExbB proton channel family VIBNI_A0395 PF01618 MotA/TolQ/ExbB proton channel family VIBNI_A0396 PF02472 Biopolymer transport protein ExbD/TolR VIBNI_A0397 PF03544 Gram-negative bacterial TonB protein C-terminal VIBNI_A0401 PF13333 Integrase core domain VIBNI_A0401 PF00665 Integrase core domain VIBNI_A0401 PF13276 HTH-like domain VIBNI_A0402 PF12838 4Fe-4S dicluster domain VIBNI_A0404 PF04381 Putative exonuclease, RdgC VIBNI_A0405 PF00072 Response regulator receiver domain VIBNI_A0405 PF00486 Transcriptional regulatory protein, C terminal VIBNI_A0406 PF11808 Phosphate regulon sensor protein PhoR VIBNI_A0406 PF00989 PAS fold VIBNI_A0406 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_A0406 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_A0407 PF12849 PBP superfamily domain VIBNI_A0408 PF02541 Ppx/GppA phosphatase family VIBNI_A0409 PF17941 Polyphosphate kinase C-terminal domain 1 VIBNI_A0409 PF02503 Polyphosphate kinase middle domain VIBNI_A0409 PF13090 Polyphosphate kinase C-terminal domain 2 VIBNI_A0409 PF13089 Polyphosphate kinase N-terminal domain VIBNI_A0410 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_A0411 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_A0412 PF00005 ABC transporter VIBNI_A0413 PF01895 PhoU domain VIBNI_A0415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_A0415 PF03466 LysR substrate binding domain VIBNI_A0416 PF03932 CutC family VIBNI_A0417 PF10417 C-terminal domain of 1-Cys peroxiredoxin VIBNI_A0417 PF00578 AhpC/TSA family VIBNI_A0418 PF03466 LysR substrate binding domain VIBNI_A0418 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_A0421 PF00571 CBS domain VIBNI_A0424 PF02547 Queuosine biosynthesis protein VIBNI_A0425 PF01702 Queuine tRNA-ribosyltransferase VIBNI_A0426 PF02699 Preprotein translocase subunit VIBNI_A0427 PF02355 Protein export membrane protein VIBNI_A0427 PF13721 SecD export protein N-terminal TM region VIBNI_A0427 PF07549 SecD/SecF GG Motif VIBNI_A0428 PF07549 SecD/SecF GG Motif VIBNI_A0428 PF02355 Protein export membrane protein VIBNI_A0431 PF00563 EAL domain VIBNI_A0431 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_A0431 PF03707 Bacterial signalling protein N terminal repeat VIBNI_A0433 PF13508 Acetyltransferase (GNAT) domain VIBNI_A0434 PF00850 Histone deacetylase domain VIBNI_A0436 PF00072 Response regulator receiver domain VIBNI_A0436 PF00196 Bacterial regulatory proteins, luxR family VIBNI_A0439 PF00456 Transketolase, thiamine diphosphate binding domain VIBNI_A0440 PF02780 Transketolase, C-terminal domain VIBNI_A0440 PF02779 Transketolase, pyrimidine binding domain VIBNI_A0441 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase VIBNI_A0441 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VIBNI_A0442 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VIBNI_A0442 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VIBNI_A0443 PF03466 LysR substrate binding domain VIBNI_A0443 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_A0444 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component VIBNI_A0444 PF03480 Bacterial extracellular solute-binding protein, family 7 VIBNI_A0446 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VIBNI_A0448 PF00583 Acetyltransferase (GNAT) family VIBNI_A0449 PF03707 Bacterial signalling protein N terminal repeat VIBNI_A0449 PF00563 EAL domain VIBNI_A0449 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_A0451 PF03441 FAD binding domain of DNA photolyase VIBNI_A0451 PF00875 DNA photolyase VIBNI_A0453 PF00875 DNA photolyase VIBNI_A0453 PF03441 FAD binding domain of DNA photolyase VIBNI_A0455 PF00593 TonB dependent receptor VIBNI_A0455 PF07715 TonB-dependent Receptor Plug Domain VIBNI_A0461 PF00082 Subtilase family VIBNI_A0461 PF01483 Proprotein convertase P-domain VIBNI_A0463 PF16658 Class II release factor RF3, C-terminal domain VIBNI_A0463 PF03144 Elongation factor Tu domain 2 VIBNI_A0463 PF00009 Elongation factor Tu GTP binding domain VIBNI_A0464 PF02734 DAK2 domain VIBNI_A0465 PF02733 Dak1 domain VIBNI_A0466 PF02502 Ribose/Galactose Isomerase VIBNI_A0467 PF13407 Periplasmic binding protein domain VIBNI_A0469 PF00005 ABC transporter VIBNI_A0470 PF02653 Branched-chain amino acid transport system / permease component VIBNI_A0472 PF00005 ABC transporter VIBNI_A0473 PF02653 Branched-chain amino acid transport system / permease component VIBNI_A0474 PF13407 Periplasmic binding protein domain VIBNI_A0475 PF00107 Zinc-binding dehydrogenase VIBNI_A0475 PF08240 Alcohol dehydrogenase GroES-like domain VIBNI_A0476 PF04198 Putative sugar-binding domain VIBNI_A0477 PF01380 SIS domain VIBNI_A0477 PF01418 Helix-turn-helix domain, rpiR family VIBNI_A0478 PF00676 Dehydrogenase E1 component VIBNI_A0479 PF02780 Transketolase, C-terminal domain VIBNI_A0479 PF02779 Transketolase, pyrimidine binding domain VIBNI_A0480 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VIBNI_A0480 PF00364 Biotin-requiring enzyme VIBNI_A0480 PF02817 e3 binding domain VIBNI_A0481 PF01116 Fructose-bisphosphate aldolase class-II VIBNI_A0482 PF13419 Haloacid dehalogenase-like hydrolase VIBNI_A0484 PF00005 ABC transporter VIBNI_A0485 PF02653 Branched-chain amino acid transport system / permease component VIBNI_A0486 PF02653 Branched-chain amino acid transport system / permease component VIBNI_A0488 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VIBNI_A0488 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VIBNI_A0489 PF00107 Zinc-binding dehydrogenase VIBNI_A0489 PF08240 Alcohol dehydrogenase GroES-like domain VIBNI_A0490 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VIBNI_A0490 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VIBNI_A0491 PF01026 TatD related DNase VIBNI_A0492 PF07670 Nucleoside recognition VIBNI_A0492 PF01773 Na+ dependent nucleoside transporter N-terminus VIBNI_A0492 PF07662 Na+ dependent nucleoside transporter C-terminus VIBNI_A0493 PF01791 DeoC/LacD family aldolase VIBNI_A0494 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain VIBNI_A0494 PF00591 Glycosyl transferase family, a/b domain VIBNI_A0494 PF02885 Glycosyl transferase family, helical bundle domain VIBNI_A0495 PF01676 Metalloenzyme superfamily VIBNI_A0496 PF01048 Phosphorylase superfamily VIBNI_A0498 PF18429 Domain of unknown function (DUF5609) VIBNI_A0500 PF18073 Rubredoxin metal binding domain VIBNI_A0506 PF00679 Elongation factor G C-terminus VIBNI_A0506 PF03144 Elongation factor Tu domain 2 VIBNI_A0506 PF00009 Elongation factor Tu GTP binding domain VIBNI_A0506 PF03764 Elongation factor G, domain IV VIBNI_A0506 PF14492 Elongation Factor G, domain II VIBNI_A0509 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_A0509 PF03466 LysR substrate binding domain VIBNI_A0511 PF03466 LysR substrate binding domain VIBNI_A0511 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_A0513 PF00501 AMP-binding enzyme VIBNI_A0516 PF00072 Response regulator receiver domain VIBNI_A0518 PF03466 LysR substrate binding domain VIBNI_A0518 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_A0519 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_A0519 PF03466 LysR substrate binding domain VIBNI_A0525 PF02595 Glycerate kinase family VIBNI_A0526 PF02447 GntP family permease VIBNI_A0527 PF13556 PucR C-terminal helix-turn-helix domain VIBNI_A0527 PF17853 GGDEF-like domain VIBNI_A0527 PF05651 Putative sugar diacid recognition VIBNI_A0535 PF03473 MOSC domain VIBNI_A0535 PF03475 3-alpha domain VIBNI_A0539 PF00155 Aminotransferase class I and II VIBNI_A0540 PF14602 Hexapeptide repeat of succinyl-transferase VIBNI_A0540 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle VIBNI_A0541 PF07130 YebG protein VIBNI_A0542 PF03466 LysR substrate binding domain VIBNI_A0542 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_A0545 PF17946 RecC C-terminal domain VIBNI_A0546 PF00580 UvrD/REP helicase N-terminal domain VIBNI_A0546 PF12705 PD-(D/E)XK nuclease superfamily VIBNI_A0546 PF13361 UvrD-like helicase C-terminal domain VIBNI_A0547 PF13538 UvrD-like helicase C-terminal domain VIBNI_A0550 PF06725 3D domain VIBNI_A0550 PF03562 MltA specific insert domain VIBNI_A0551 PF00899 ThiF family VIBNI_A0552 PF02657 Fe-S metabolism associated domain VIBNI_A0553 PF01965 DJ-1/PfpI family VIBNI_A0554 PF08546 Ketopantoate reductase PanE/ApbA C terminal VIBNI_A0554 PF02558 Ketopantoate reductase PanE/ApbA VIBNI_A0556 PF03502 Nucleoside-specific channel-forming protein, Tsx VIBNI_A0558 PF04542 Sigma-70 region 2 VIBNI_A0558 PF04545 Sigma-70, region 4 VIBNI_A0560 PF07690 Major Facilitator Superfamily VIBNI_A0561 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VIBNI_A0563 PF05175 Methyltransferase small domain VIBNI_A0565 PF01722 BolA-like protein VIBNI_A0566 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) VIBNI_A0566 PF11973 NQRA C-terminal domain VIBNI_A0567 PF03116 NQR2, RnfD, RnfE family VIBNI_A0568 PF04205 FMN-binding domain VIBNI_A0569 PF02508 Rnf-Nqr subunit, membrane protein VIBNI_A0570 PF02508 Rnf-Nqr subunit, membrane protein VIBNI_A0571 PF00970 Oxidoreductase FAD-binding domain VIBNI_A0571 PF00111 2Fe-2S iron-sulfur cluster binding domain VIBNI_A0571 PF00175 Oxidoreductase NAD-binding domain VIBNI_A0572 PF02424 ApbE family VIBNI_A0576 PF13677 Membrane MotB of proton-channel complex MotA/MotB VIBNI_A0576 PF00691 OmpA family VIBNI_A0577 PF01618 MotA/TolQ/ExbB proton channel family VIBNI_A0581 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_A0581 PF00072 Response regulator receiver domain VIBNI_A0584 PF00817 impB/mucB/samB family VIBNI_A0584 PF11799 impB/mucB/samB family C-terminal domain VIBNI_A0585 PF02583 Metal-sensitive transcriptional repressor VIBNI_A0586 PF03824 High-affinity nickel-transport protein VIBNI_A0591 PF00535 Glycosyl transferase family 2 VIBNI_A0592 PF00570 HRDC domain VIBNI_A0592 PF00271 Helicase conserved C-terminal domain VIBNI_A0592 PF00270 DEAD/DEAH box helicase VIBNI_A0592 PF16124 RecQ zinc-binding VIBNI_A0592 PF09382 RQC domain VIBNI_A0595 PF00704 Glycosyl hydrolases family 18 VIBNI_A0596 PF00209 Sodium:neurotransmitter symporter family VIBNI_A0598 PF06786 Uncharacterised protein family (UPF0253) VIBNI_A0600 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VIBNI_A0600 PF04073 Aminoacyl-tRNA editing domain VIBNI_A0600 PF03129 Anticodon binding domain VIBNI_A0601 PF18389 TrmO C-terminal domain VIBNI_A0601 PF01980 tRNA-methyltransferase O VIBNI_A0602 PF01197 Ribosomal protein L31 VIBNI_A0603 PF00444 Ribosomal protein L36 VIBNI_A0605 PF03806 AbgT putative transporter family VIBNI_A0606 PF02581 Thiamine monophosphate synthase VIBNI_A0606 PF08543 Phosphomethylpyrimidine kinase VIBNI_A0611 PF01370 NAD dependent epimerase/dehydratase family VIBNI_A0612 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VIBNI_A0612 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VIBNI_A0614 PF03099 Biotin/lipoate A/B protein ligase family VIBNI_A0616 PF01966 HD domain VIBNI_A0617 PF01668 SmpB protein VIBNI_A0619 PF03364 Polyketide cyclase / dehydrase and lipid transport VIBNI_A0620 PF03658 RnfH family Ubiquitin VIBNI_A0621 PF04355 SmpA / OmlA family VIBNI_A0626 PF02463 RecF/RecN/SMC N terminal domain VIBNI_A0628 PF01025 GrpE VIBNI_A0630 PF00114 Pilin (bacterial filament) VIBNI_A0630 PF07963 Prokaryotic N-terminal methylation motif VIBNI_A0635 PF03806 AbgT putative transporter family VIBNI_A0637 PF00756 Putative esterase VIBNI_A0638 PF08240 Alcohol dehydrogenase GroES-like domain VIBNI_A0638 PF00107 Zinc-binding dehydrogenase VIBNI_A0639 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_A0639 PF03466 LysR substrate binding domain VIBNI_A0640 PF14437 MafB19-like deaminase VIBNI_A0641 PF01464 Transglycosylase SLT domain VIBNI_A0641 PF00497 Bacterial extracellular solute-binding proteins, family 3 VIBNI_A0642 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal VIBNI_A0642 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain VIBNI_A0642 PF02769 AIR synthase related protein, C-terminal domain VIBNI_A0645 PF01546 Peptidase family M20/M25/M40 VIBNI_A0645 PF07687 Peptidase dimerisation domain VIBNI_A0646 PF00860 Permease family VIBNI_A0647 PF00156 Phosphoribosyl transferase domain VIBNI_A0649 PF07417 Sigma factor-binding transcriptional regulator Crl VIBNI_A0650 PF01472 PUA domain VIBNI_A0650 PF00696 Amino acid kinase family VIBNI_A0651 PF00171 Aldehyde dehydrogenase family VIBNI_A0653 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VIBNI_A0653 PF01872 RibD C-terminal domain VIBNI_A0654 PF00677 Lumazine binding domain VIBNI_A0655 PF00925 GTP cyclohydrolase II VIBNI_A0655 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase VIBNI_A0656 PF05547 Immune inhibitor A peptidase M6 VIBNI_A0656 PF00801 PKD domain VIBNI_A0659 PF00885 6,7-dimethyl-8-ribityllumazine synthase VIBNI_A0661 PF02769 AIR synthase related protein, C-terminal domain VIBNI_A0661 PF00586 AIR synthase related protein, N-terminal domain VIBNI_A0662 PF04608 Phosphatidylglycerophosphatase A VIBNI_A0663 PF02780 Transketolase, C-terminal domain VIBNI_A0663 PF02779 Transketolase, pyrimidine binding domain VIBNI_A0663 PF13292 1-deoxy-D-xylulose-5-phosphate synthase VIBNI_A0664 PF00348 Polyprenyl synthetase VIBNI_A0665 PF02609 Exonuclease VII small subunit VIBNI_A0666 PF01618 MotA/TolQ/ExbB proton channel family VIBNI_A0667 PF13677 Membrane MotB of proton-channel complex MotA/MotB VIBNI_A0667 PF00691 OmpA family VIBNI_A0667 PF13677 Membrane MotB of proton-channel complex MotA/MotB VIBNI_A0667 PF00691 OmpA family VIBNI_A0668 PF02926 THUMP domain VIBNI_A0668 PF02568 Thiamine biosynthesis protein (ThiI) VIBNI_A0669 PF05656 Protein of unknown function (DUF805) VIBNI_A0670 PF13936 Helix-turn-helix domain VIBNI_A0670 PF04198 Putative sugar-binding domain VIBNI_A0672 PF00005 ABC transporter VIBNI_A0673 PF13407 Periplasmic binding protein domain VIBNI_A0674 PF02653 Branched-chain amino acid transport system / permease component VIBNI_A0676 PF00456 Transketolase, thiamine diphosphate binding domain VIBNI_A0677 PF02780 Transketolase, C-terminal domain VIBNI_A0677 PF02779 Transketolase, pyrimidine binding domain VIBNI_A0678 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VIBNI_A0678 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VIBNI_A0680 PF03466 LysR substrate binding domain VIBNI_A0680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_A0682 PF04241 Protein of unknown function (DUF423) VIBNI_A0683 PF18125 RlmM ferredoxin-like domain VIBNI_A0683 PF01728 FtsJ-like methyltransferase VIBNI_A0685 PF03358 NADPH-dependent FMN reductase VIBNI_A0686 PF03960 ArsC family VIBNI_A0687 PF01435 Peptidase family M48 VIBNI_A0687 PF13181 Tetratricopeptide repeat VIBNI_A0688 PF01594 AI-2E family transporter VIBNI_A0689 PF00578 AhpC/TSA family VIBNI_A0691 PF00701 Dihydrodipicolinate synthetase family VIBNI_A0694 PF02557 D-alanyl-D-alanine carboxypeptidase VIBNI_A0695 PF01546 Peptidase family M20/M25/M40 VIBNI_A0695 PF07687 Peptidase dimerisation domain VIBNI_A0696 PF03960 ArsC family VIBNI_A0702 PF11143 Protein of unknown function (DUF2919) VIBNI_A0703 PF04261 Dyp-type peroxidase family VIBNI_A0704 PF00669 Bacterial flagellin N-terminal helical region VIBNI_A0704 PF00700 Bacterial flagellin C-terminal helical region VIBNI_A0704 PF07196 Flagellin hook IN motif VIBNI_A0705 PF03466 LysR substrate binding domain VIBNI_A0705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_A0707 PF07196 Flagellin hook IN motif VIBNI_A0707 PF00669 Bacterial flagellin N-terminal helical region VIBNI_A0707 PF00700 Bacterial flagellin C-terminal helical region VIBNI_A0708 PF07196 Flagellin hook IN motif VIBNI_A0708 PF00669 Bacterial flagellin N-terminal helical region VIBNI_A0708 PF00700 Bacterial flagellin C-terminal helical region VIBNI_A0709 PF00669 Bacterial flagellin N-terminal helical region VIBNI_A0709 PF07196 Flagellin hook IN motif VIBNI_A0709 PF00700 Bacterial flagellin C-terminal helical region VIBNI_A0710 PF00669 Bacterial flagellin N-terminal helical region VIBNI_A0710 PF00700 Bacterial flagellin C-terminal helical region VIBNI_A0710 PF07196 Flagellin hook IN motif VIBNI_A0712 PF07196 Flagellin hook IN motif VIBNI_A0712 PF00700 Bacterial flagellin C-terminal helical region VIBNI_A0712 PF00669 Bacterial flagellin N-terminal helical region VIBNI_A0713 PF00669 Bacterial flagellin N-terminal helical region VIBNI_A0713 PF07196 Flagellin hook IN motif VIBNI_A0713 PF00700 Bacterial flagellin C-terminal helical region VIBNI_A0714 PF03646 FlaG protein VIBNI_A0715 PF07196 Flagellin hook IN motif VIBNI_A0715 PF02465 Flagellar hook-associated protein 2 N-terminus VIBNI_A0715 PF07195 Flagellar hook-associated protein 2 C-terminus VIBNI_A0717 PF02561 Flagellar protein FliS VIBNI_A0719 PF02954 Bacterial regulatory protein, Fis family VIBNI_A0719 PF00072 Response regulator receiver domain VIBNI_A0719 PF00158 Sigma-54 interaction domain VIBNI_A0720 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_A0720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_A0721 PF00072 Response regulator receiver domain VIBNI_A0721 PF02954 Bacterial regulatory protein, Fis family VIBNI_A0721 PF00158 Sigma-54 interaction domain VIBNI_A0722 PF02049 Flagellar hook-basal body complex protein FliE VIBNI_A0723 PF08345 Flagellar M-ring protein C-terminal VIBNI_A0723 PF01514 Secretory protein of YscJ/FliF family VIBNI_A0724 PF14841 FliG middle domain VIBNI_A0724 PF01706 FliG C-terminal domain VIBNI_A0724 PF14842 FliG N-terminal domain VIBNI_A0726 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VIBNI_A0726 PF18269 T3SS EscN ATPase C-terminal domain VIBNI_A0729 PF03748 Flagellar basal body-associated protein FliL VIBNI_A0730 PF02154 Flagellar motor switch protein FliM VIBNI_A0730 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term VIBNI_A0731 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term VIBNI_A0732 PF04347 Flagellar biosynthesis protein, FliO VIBNI_A0733 PF00813 FliP family VIBNI_A0734 PF01313 Bacterial export proteins, family 3 VIBNI_A0735 PF01311 Bacterial export proteins, family 1 VIBNI_A0736 PF01312 FlhB HrpN YscU SpaS Family VIBNI_A0738 PF00771 FHIPEP family VIBNI_A0739 PF00448 SRP54-type protein, GTPase domain VIBNI_A0740 PF10609 NUBPL iron-transfer P-loop NTPase VIBNI_A0741 PF04539 Sigma-70 region 3 VIBNI_A0741 PF04545 Sigma-70, region 4 VIBNI_A0741 PF04542 Sigma-70 region 2 VIBNI_A0743 PF00072 Response regulator receiver domain VIBNI_A0744 PF04344 Chemotaxis phosphatase, CheZ VIBNI_A0745 PF07194 P2 response regulator binding domain VIBNI_A0745 PF01627 Hpt domain VIBNI_A0745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_A0745 PF02895 Signal transducing histidine kinase, homodimeric domain VIBNI_A0745 PF01584 CheW-like domain VIBNI_A0746 PF00072 Response regulator receiver domain VIBNI_A0746 PF01339 CheB methylesterase VIBNI_A0747 PF13614 AAA domain VIBNI_A0749 PF01584 CheW-like domain VIBNI_A0751 PF00005 ABC transporter VIBNI_A0752 PF03379 CcmB protein VIBNI_A0753 PF01578 Cytochrome C assembly protein VIBNI_A0755 PF03100 CcmE VIBNI_A0756 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal VIBNI_A0756 PF01578 Cytochrome C assembly protein VIBNI_A0757 PF08534 Redoxin VIBNI_A0758 PF03918 Cytochrome C biogenesis protein VIBNI_A0759 PF03918 Cytochrome C biogenesis protein VIBNI_A0760 PF04333 MlaA lipoprotein VIBNI_A0761 PF00005 ABC transporter VIBNI_A0761 PF00664 ABC transporter transmembrane region VIBNI_A0762 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VIBNI_A0764 PF08281 Sigma-70, region 4 VIBNI_A0764 PF04542 Sigma-70 region 2 VIBNI_A0765 PF00108 Thiolase, N-terminal domain VIBNI_A0765 PF02803 Thiolase, C-terminal domain VIBNI_A0766 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VIBNI_A0766 PF00378 Enoyl-CoA hydratase/isomerase VIBNI_A0766 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VIBNI_A0768 PF16187 Middle or third domain of peptidase_M16 VIBNI_A0768 PF05193 Peptidase M16 inactive domain VIBNI_A0768 PF00675 Insulinase (Peptidase family M16) VIBNI_A0769 PF00300 Histidine phosphatase superfamily (branch 1) VIBNI_A0770 PF01713 Smr domain VIBNI_A0771 PF05175 Methyltransferase small domain VIBNI_A0772 PF01264 Chorismate synthase VIBNI_A0773 PF03466 LysR substrate binding domain VIBNI_A0773 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_A0775 PF03458 UPF0126 domain VIBNI_A0776 PF04315 Elongation factor P hydroxylase VIBNI_A0777 PF08891 YfcL protein VIBNI_A0780 PF01266 FAD dependent oxidoreductase VIBNI_A0780 PF05430 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A0781 PF02801 Beta-ketoacyl synthase, C-terminal domain VIBNI_A0781 PF00109 Beta-ketoacyl synthase, N-terminal domain VIBNI_A0782 PF00072 Response regulator receiver domain VIBNI_A0782 PF00486 Transcriptional regulatory protein, C terminal VIBNI_A0787 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VIBNI_A0787 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VIBNI_A0788 PF00356 Bacterial regulatory proteins, lacI family VIBNI_A0789 PF13407 Periplasmic binding protein domain VIBNI_A0790 PF02653 Branched-chain amino acid transport system / permease component VIBNI_A0791 PF00005 ABC transporter VIBNI_A0792 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VIBNI_A0792 PF02894 Oxidoreductase family, C-terminal alpha/beta domain VIBNI_A0793 PF00356 Bacterial regulatory proteins, lacI family VIBNI_A0795 PF08402 TOBE domain VIBNI_A0795 PF00005 ABC transporter VIBNI_A0796 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VIBNI_A0796 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VIBNI_A0797 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_A0800 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VIBNI_A0800 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VIBNI_A0800 PF11890 Domain of unknown function (DUF3410) VIBNI_A0801 PF01118 Semialdehyde dehydrogenase, NAD binding domain VIBNI_A0801 PF02774 Semialdehyde dehydrogenase, dimerisation domain VIBNI_A0803 PF01416 tRNA pseudouridine synthase VIBNI_A0805 PF17848 Acetyl-coA carboxylase zinc finger domain VIBNI_A0805 PF01039 Carboxyl transferase domain VIBNI_A0806 PF02875 Mur ligase family, glutamate ligase domain VIBNI_A0806 PF08245 Mur ligase middle domain VIBNI_A0807 PF05036 Sporulation related domain VIBNI_A0808 PF02674 Colicin V production protein VIBNI_A0809 PF00156 Phosphoribosyl transferase domain VIBNI_A0810 PF03466 LysR substrate binding domain VIBNI_A0810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_A0811 PF00072 Response regulator receiver domain VIBNI_A0814 PF00156 Phosphoribosyl transferase domain VIBNI_A0815 PF12170 DNA polymerase III tau subunit V interacting with alpha VIBNI_A0815 PF12169 DNA polymerase III subunits gamma and tau domain III VIBNI_A0815 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding VIBNI_A0816 PF02575 YbaB/EbfC DNA-binding family VIBNI_A0819 PF03692 Putative zinc- or iron-chelating domain VIBNI_A0820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_A0820 PF03466 LysR substrate binding domain VIBNI_A0824 PF02028 BCCT, betaine/carnitine/choline family transporter VIBNI_A0827 PF01032 FecCD transport family VIBNI_A0828 PF01497 Periplasmic binding protein VIBNI_A0829 PF00005 ABC transporter VIBNI_A0831 PF00593 TonB dependent receptor VIBNI_A0831 PF07715 TonB-dependent Receptor Plug Domain VIBNI_A0832 PF12833 Helix-turn-helix domain VIBNI_A0833 PF13847 Methyltransferase domain VIBNI_A0837 PF00672 HAMP domain VIBNI_A0837 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_A0837 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_A0838 PF00486 Transcriptional regulatory protein, C terminal VIBNI_A0838 PF00072 Response regulator receiver domain VIBNI_A0839 PF01263 Aldose 1-epimerase VIBNI_A0840 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VIBNI_A0840 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VIBNI_A0842 PF01641 SelR domain VIBNI_A0844 PF07023 Protein of unknown function (DUF1315) VIBNI_A0845 PF17763 Glutaminase/Asparaginase C-terminal domain VIBNI_A0845 PF00710 Asparaginase, N-terminal VIBNI_A0846 PF01343 Peptidase family S49 VIBNI_A0847 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VIBNI_A0847 PF07992 Pyridine nucleotide-disulphide oxidoreductase VIBNI_A0848 PF00881 Nitroreductase family VIBNI_A0849 PF01751 Toprim domain VIBNI_A0849 PF01131 DNA topoisomerase VIBNI_A0850 PF01625 Peptide methionine sulfoxide reductase VIBNI_A0850 PF01641 SelR domain VIBNI_A0851 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase VIBNI_A0851 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VIBNI_A0852 PF00171 Aldehyde dehydrogenase family VIBNI_A0853 PF00132 Bacterial transferase hexapeptide (six repeats) VIBNI_A0853 PF06426 Serine acetyltransferase, N-terminal VIBNI_A0855 PF07687 Peptidase dimerisation domain VIBNI_A0855 PF01546 Peptidase family M20/M25/M40 VIBNI_A0856 PF03466 LysR substrate binding domain VIBNI_A0856 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_A0857 PF00106 short chain dehydrogenase VIBNI_A0858 PF00850 Histone deacetylase domain VIBNI_A0861 PF00266 Aminotransferase class-V VIBNI_A0863 PF03473 MOSC domain VIBNI_A0863 PF03475 3-alpha domain VIBNI_A0864 PF00117 Glutamine amidotransferase class-I VIBNI_A0866 PF00293 NUDIX domain VIBNI_A0875 PF00158 Sigma-54 interaction domain VIBNI_A0875 PF02954 Bacterial regulatory protein, Fis family VIBNI_A0875 PF01590 GAF domain VIBNI_A0876 PF01513 ATP-NAD kinase VIBNI_A0877 PF00676 Dehydrogenase E1 component VIBNI_A0878 PF02779 Transketolase, pyrimidine binding domain VIBNI_A0878 PF02780 Transketolase, C-terminal domain VIBNI_A0879 PF00364 Biotin-requiring enzyme VIBNI_A0879 PF00561 alpha/beta hydrolase fold VIBNI_A0880 PF11893 Domain of unknown function (DUF3413) VIBNI_A0880 PF00884 Sulfatase VIBNI_A0881 PF07208 Protein of unknown function (DUF1414) VIBNI_A0882 PF04245 37-kD nucleoid-associated bacterial protein VIBNI_A0884 PF01118 Semialdehyde dehydrogenase, NAD binding domain VIBNI_A0884 PF02774 Semialdehyde dehydrogenase, dimerisation domain VIBNI_A0886 PF00520 Ion transport protein VIBNI_A0886 PF00027 Cyclic nucleotide-binding domain VIBNI_A0887 PF01914 MarC family integral membrane protein VIBNI_A0888 PF00171 Aldehyde dehydrogenase family VIBNI_A0888 PF00465 Iron-containing alcohol dehydrogenase VIBNI_A0893 PF00462 Glutaredoxin VIBNI_A0894 PF03553 Na+/H+ antiporter family VIBNI_A0894 PF13726 Na+-H+ antiporter family VIBNI_A0895 PF00929 Exonuclease VIBNI_A0896 PF18393 MotY N-terminal domain VIBNI_A0896 PF00691 OmpA family VIBNI_A0897 PF10952 Protein of unknown function (DUF2753) VIBNI_A0898 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VIBNI_A0899 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VIBNI_A0900 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_A0901 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_A0901 PF12911 N-terminal TM domain of oligopeptide transport permease C VIBNI_A0902 PF00005 ABC transporter VIBNI_A0902 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VIBNI_A0903 PF10576 Iron-sulfur binding domain of endonuclease III VIBNI_A0903 PF00633 Helix-hairpin-helix motif VIBNI_A0903 PF00730 HhH-GPD superfamily base excision DNA repair protein VIBNI_A0906 PF03116 NQR2, RnfD, RnfE family VIBNI_A0907 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit VIBNI_A0907 PF10531 SLBB domain VIBNI_A0907 PF13375 RnfC Barrel sandwich hybrid domain VIBNI_A0907 PF12838 4Fe-4S dicluster domain VIBNI_A0908 PF04060 Putative Fe-S cluster VIBNI_A0912 PF17757 UvrB interaction domain VIBNI_A0912 PF12344 Ultra-violet resistance protein B VIBNI_A0912 PF02151 UvrB/uvrC motif VIBNI_A0912 PF04851 Type III restriction enzyme, res subunit VIBNI_A0912 PF00271 Helicase conserved C-terminal domain VIBNI_A0914 PF00072 Response regulator receiver domain VIBNI_A0914 PF02954 Bacterial regulatory protein, Fis family VIBNI_A0914 PF00158 Sigma-54 interaction domain VIBNI_A0915 PF01627 Hpt domain VIBNI_A0916 PF01933 Uncharacterised protein family UPF0052 VIBNI_A0917 PF06463 Molybdenum Cofactor Synthesis C VIBNI_A0917 PF04055 Radical SAM superfamily VIBNI_A0918 PF00994 Probable molybdopterin binding domain VIBNI_A0919 PF01967 MoaC family VIBNI_A0920 PF02597 ThiS family VIBNI_A0921 PF02391 MoaE protein VIBNI_A0922 PF00704 Glycosyl hydrolases family 18 VIBNI_A0922 PF08329 Chitinase A, N-terminal domain VIBNI_A0924 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VIBNI_A0925 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_A0926 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_A0926 PF12911 N-terminal TM domain of oligopeptide transport permease C VIBNI_A0927 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VIBNI_A0927 PF00005 ABC transporter VIBNI_A0928 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VIBNI_A0928 PF00005 ABC transporter VIBNI_A0930 PF13409 Glutathione S-transferase, N-terminal domain VIBNI_A0932 PF13533 Biotin-lipoyl like VIBNI_A0933 PF00873 AcrB/AcrD/AcrF family VIBNI_A0935 PF00291 Pyridoxal-phosphate dependent enzyme VIBNI_A0936 PF01037 Lrp/AsnC ligand binding domain VIBNI_A0936 PF13404 AsnC-type helix-turn-helix domain VIBNI_A0940 PF09619 Type III secretion system lipoprotein chaperone (YscW) VIBNI_A0941 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain VIBNI_A0943 PF17156 Gammaproteobacterial periplasmic sensor domain VIBNI_A0943 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_A0944 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBNI_A0944 PF00672 HAMP domain VIBNI_A0944 PF12729 Four helix bundle sensory module for signal transduction VIBNI_A0945 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase VIBNI_A0945 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VIBNI_A0946 PF00378 Enoyl-CoA hydratase/isomerase VIBNI_A0947 PF00378 Enoyl-CoA hydratase/isomerase VIBNI_A0948 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VIBNI_A0948 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VIBNI_A0948 PF02770 Acyl-CoA dehydrogenase, middle domain VIBNI_A0949 PF00171 Aldehyde dehydrogenase family VIBNI_A0951 PF12833 Helix-turn-helix domain VIBNI_A0951 PF02311 AraC-like ligand binding domain VIBNI_A0952 PF00989 PAS fold VIBNI_A0952 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_A0952 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_A0953 PF00072 Response regulator receiver domain VIBNI_A0953 PF00196 Bacterial regulatory proteins, luxR family VIBNI_A0954 PF01012 Electron transfer flavoprotein domain VIBNI_A0954 PF00766 Electron transfer flavoprotein FAD-binding domain VIBNI_A0955 PF01012 Electron transfer flavoprotein domain VIBNI_A0958 PF00180 Isocitrate/isopropylmalate dehydrogenase VIBNI_A0960 PF00171 Aldehyde dehydrogenase family VIBNI_A0961 PF00005 ABC transporter VIBNI_A0961 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VIBNI_A0962 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VIBNI_A0962 PF00005 ABC transporter VIBNI_A0964 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_A0965 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VIBNI_A0966 PF07687 Peptidase dimerisation domain VIBNI_A0966 PF01546 Peptidase family M20/M25/M40 VIBNI_A0968 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal VIBNI_A0968 PF00676 Dehydrogenase E1 component VIBNI_A0969 PF02779 Transketolase, pyrimidine binding domain VIBNI_A0969 PF02780 Transketolase, C-terminal domain VIBNI_A0970 PF00364 Biotin-requiring enzyme VIBNI_A0970 PF02817 e3 binding domain VIBNI_A0970 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VIBNI_A0971 PF01116 Fructose-bisphosphate aldolase class-II VIBNI_A0972 PF01979 Amidohydrolase family VIBNI_A0973 PF03610 PTS system fructose IIA component VIBNI_A0974 PF03613 PTS system mannose/fructose/sorbose family IID component VIBNI_A0975 PF03609 PTS system sorbose-specific iic component VIBNI_A0976 PF03830 PTS system sorbose subfamily IIB component VIBNI_A0977 PF01380 SIS domain VIBNI_A0978 PF08013 Tagatose 6 phosphate kinase VIBNI_A0979 PF00455 DeoR C terminal sensor domain VIBNI_A0979 PF08220 DeoR-like helix-turn-helix domain VIBNI_A0980 PF08220 DeoR-like helix-turn-helix domain VIBNI_A0980 PF00455 DeoR C terminal sensor domain VIBNI_A0985 PF00440 Bacterial regulatory proteins, tetR family VIBNI_A1005 PF02630 SCO1/SenC VIBNI_A1006 PF01040 UbiA prenyltransferase family VIBNI_A1007 PF03626 Prokaryotic Cytochrome C oxidase subunit IV VIBNI_A1008 PF00510 Cytochrome c oxidase subunit III VIBNI_A1009 PF00115 Cytochrome C and Quinol oxidase polypeptide I VIBNI_A1010 PF06481 COX Aromatic Rich Motif VIBNI_A1010 PF00116 Cytochrome C oxidase subunit II, periplasmic domain VIBNI_A1011 PF03466 LysR substrate binding domain VIBNI_A1011 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_A1012 PF00698 Acyl transferase domain VIBNI_A1013 PF00975 Thioesterase domain VIBNI_A1018 PF00034 Cytochrome c VIBNI_A1022 PF13439 Glycosyltransferase Family 4 VIBNI_A1022 PF00534 Glycosyl transferases group 1 VIBNI_A1030 PF00067 Cytochrome P450 VIBNI_A1031 PF03466 LysR substrate binding domain VIBNI_A1031 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_A1032 PF00202 Aminotransferase class-III VIBNI_A1034 PF16868 NMT1-like family VIBNI_A1036 PF00072 Response regulator receiver domain VIBNI_A1036 PF09308 LuxQ, periplasmic VIBNI_A1036 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_A1036 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_A1037 PF00072 Response regulator receiver domain VIBNI_A1044 PF00294 pfkB family carbohydrate kinase VIBNI_A1046 PF00072 Response regulator receiver domain VIBNI_A1046 PF00486 Transcriptional regulatory protein, C terminal VIBNI_A1047 PF08521 Two-component sensor kinase N-terminal VIBNI_A1047 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_A1047 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_A1048 PF02743 Cache domain VIBNI_A1048 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBNI_A1048 PF00672 HAMP domain VIBNI_A1049 PF01584 CheW-like domain VIBNI_A1049 PF00072 Response regulator receiver domain VIBNI_A1050 PF00563 EAL domain VIBNI_A1050 PF03707 Bacterial signalling protein N terminal repeat VIBNI_A1050 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_A1051 PF00571 CBS domain VIBNI_A1051 PF03061 Thioesterase superfamily VIBNI_A1051 PF00392 Bacterial regulatory proteins, gntR family VIBNI_A1051 PF07085 DRTGG domain VIBNI_A1052 PF01554 MatE VIBNI_A1053 PF00939 Sodium:sulfate symporter transmembrane region VIBNI_A1054 PF00497 Bacterial extracellular solute-binding proteins, family 3 VIBNI_A1054 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_A1054 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_A1056 PF00403 Heavy-metal-associated domain VIBNI_A1057 PF01048 Phosphorylase superfamily VIBNI_A1059 PF17200 Single Cache domain 2 VIBNI_A1059 PF00672 HAMP domain VIBNI_A1059 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBNI_A1060 PF01230 HIT domain VIBNI_A1065 PF05728 Uncharacterised protein family (UPF0227) VIBNI_A1066 PF00114 Pilin (bacterial filament) VIBNI_A1066 PF07963 Prokaryotic N-terminal methylation motif VIBNI_A1068 PF07992 Pyridine nucleotide-disulphide oxidoreductase VIBNI_A1071 PF00271 Helicase conserved C-terminal domain VIBNI_A1071 PF00270 DEAD/DEAH box helicase VIBNI_A1071 PF17757 UvrB interaction domain VIBNI_A1071 PF02559 CarD-like/TRCF domain VIBNI_A1071 PF03461 TRCF domain VIBNI_A1073 PF02687 FtsX-like permease family VIBNI_A1073 PF12704 MacB-like periplasmic core domain VIBNI_A1074 PF00005 ABC transporter VIBNI_A1075 PF12704 MacB-like periplasmic core domain VIBNI_A1075 PF02687 FtsX-like permease family VIBNI_A1077 PF00753 Metallo-beta-lactamase superfamily VIBNI_A1077 PF13567 Domain of unknown function (DUF4131) VIBNI_A1077 PF03772 Competence protein VIBNI_A1078 PF00005 ABC transporter VIBNI_A1078 PF00664 ABC transporter transmembrane region VIBNI_A1079 PF02606 Tetraacyldisaccharide-1-P 4'-kinase VIBNI_A1080 PF03966 Trm112p-like protein VIBNI_A1081 PF02348 Cytidylyltransferase VIBNI_A1083 PF00535 Glycosyl transferase family 2 VIBNI_A1087 PF04293 SpoVR like protein VIBNI_A1088 PF04285 Protein of unknown function (DUF444) VIBNI_A1089 PF06798 PrkA serine protein kinase C-terminal domain VIBNI_A1089 PF08298 PrkA AAA domain VIBNI_A1092 PF04055 Radical SAM superfamily VIBNI_A1094 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBNI_A1094 PF00672 HAMP domain VIBNI_A1095 PF02901 Pyruvate formate lyase-like VIBNI_A1095 PF01228 Glycine radical VIBNI_A1099 PF00005 ABC transporter VIBNI_A1100 PF00497 Bacterial extracellular solute-binding proteins, family 3 VIBNI_A1101 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_A1102 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_A1105 PF00440 Bacterial regulatory proteins, tetR family VIBNI_A1107 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VIBNI_A1107 PF02770 Acyl-CoA dehydrogenase, middle domain VIBNI_A1107 PF09317 Domain of unknown function (DUF1974) VIBNI_A1107 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VIBNI_A1108 PF07055 Enoyl reductase FAD binding domain VIBNI_A1108 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase VIBNI_A1108 PF12241 Trans-2-enoyl-CoA reductase catalytic region VIBNI_A1109 PF02080 TrkA-C domain VIBNI_A1109 PF06826 Predicted Permease Membrane Region VIBNI_A1110 PF00462 Glutaredoxin VIBNI_A1111 PF00465 Iron-containing alcohol dehydrogenase VIBNI_A1112 PF01380 SIS domain VIBNI_A1112 PF01418 Helix-turn-helix domain, rpiR family VIBNI_A1113 PF00282 Pyridoxal-dependent decarboxylase conserved domain VIBNI_A1116 PF04993 TfoX N-terminal domain VIBNI_A1116 PF04994 TfoX C-terminal domain VIBNI_A1117 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_A1118 PF12911 N-terminal TM domain of oligopeptide transport permease C VIBNI_A1118 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_A1119 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VIBNI_A1120 PF00005 ABC transporter VIBNI_A1120 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VIBNI_A1121 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VIBNI_A1121 PF00005 ABC transporter VIBNI_A1125 PF00072 Response regulator receiver domain VIBNI_A1125 PF02954 Bacterial regulatory protein, Fis family VIBNI_A1125 PF00158 Sigma-54 interaction domain VIBNI_A1126 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_A1126 PF00072 Response regulator receiver domain VIBNI_A1126 PF08448 PAS fold VIBNI_A1126 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_A1126 PF13188 PAS domain VIBNI_A1128 PF00266 Aminotransferase class-V VIBNI_A1129 PF00486 Transcriptional regulatory protein, C terminal VIBNI_A1129 PF00072 Response regulator receiver domain VIBNI_A1130 PF00072 Response regulator receiver domain VIBNI_A1130 PF08448 PAS fold VIBNI_A1130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_A1130 PF13188 PAS domain VIBNI_A1130 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_A1131 PF13407 Periplasmic binding protein domain VIBNI_A1132 PF02653 Branched-chain amino acid transport system / permease component VIBNI_A1133 PF00005 ABC transporter VIBNI_A1134 PF13407 Periplasmic binding protein domain VIBNI_A1135 PF00664 ABC transporter transmembrane region VIBNI_A1135 PF00005 ABC transporter VIBNI_A1136 PF00005 ABC transporter VIBNI_A1136 PF00664 ABC transporter transmembrane region VIBNI_A1137 PF07992 Pyridine nucleotide-disulphide oxidoreductase VIBNI_A1140 PF00266 Aminotransferase class-V VIBNI_A1142 PF00072 Response regulator receiver domain VIBNI_A1142 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_A1143 PF02698 DUF218 domain VIBNI_A1146 PF00390 Malic enzyme, N-terminal domain VIBNI_A1146 PF03949 Malic enzyme, NAD binding domain VIBNI_A1147 PF04408 Helicase associated domain (HA2) VIBNI_A1147 PF00271 Helicase conserved C-terminal domain VIBNI_A1147 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold VIBNI_A1147 PF11898 Domain of unknown function (DUF3418) VIBNI_A1147 PF00270 DEAD/DEAH box helicase VIBNI_A1150 PF00583 Acetyltransferase (GNAT) family VIBNI_A1157 PF02801 Beta-ketoacyl synthase, C-terminal domain VIBNI_A1157 PF00109 Beta-ketoacyl synthase, N-terminal domain VIBNI_A1158 PF02801 Beta-ketoacyl synthase, C-terminal domain VIBNI_A1158 PF00109 Beta-ketoacyl synthase, N-terminal domain VIBNI_A1159 PF02801 Beta-ketoacyl synthase, C-terminal domain VIBNI_A1159 PF00109 Beta-ketoacyl synthase, N-terminal domain VIBNI_A1160 PF00550 Phosphopantetheine attachment site VIBNI_A1162 PF01259 SAICAR synthetase VIBNI_A1166 PF00691 OmpA family VIBNI_A1166 PF04972 BON domain VIBNI_A1169 PF13183 4Fe-4S dicluster domain VIBNI_A1169 PF01565 FAD binding domain VIBNI_A1169 PF02913 FAD linked oxidases, C-terminal domain VIBNI_A1173 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_A1173 PF05230 MASE2 domain VIBNI_A1176 PF00221 Aromatic amino acid lyase VIBNI_A1177 PF01175 Urocanase Rossmann-like domain VIBNI_A1177 PF17391 Urocanase N-terminal domain VIBNI_A1177 PF17392 Urocanase C-terminal domain VIBNI_A1178 PF00491 Arginase family VIBNI_A1179 PF01979 Amidohydrolase family VIBNI_A1180 PF07702 UTRA domain VIBNI_A1180 PF00392 Bacterial regulatory proteins, gntR family VIBNI_A1181 PF01547 Bacterial extracellular solute-binding protein VIBNI_A1182 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_A1183 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_A1184 PF00128 Alpha amylase, catalytic domain VIBNI_A1185 PF00005 ABC transporter VIBNI_A1185 PF17912 MalK OB fold domain VIBNI_A1185 PF03459 TOBE domain VIBNI_A1186 PF00356 Bacterial regulatory proteins, lacI family VIBNI_A1188 PF01810 LysE type translocator VIBNI_A1198 PF03786 D-mannonate dehydratase (UxuA) VIBNI_A1200 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase VIBNI_A1201 PF01979 Amidohydrolase family VIBNI_A1202 PF03480 Bacterial extracellular solute-binding protein, family 7 VIBNI_A1204 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VIBNI_A1208 PF01557 Fumarylacetoacetate (FAA) hydrolase family VIBNI_A1209 PF13378 Enolase C-terminal domain-like VIBNI_A1209 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain VIBNI_A1213 PF13302 Acetyltransferase (GNAT) domain VIBNI_A1218 PF00005 ABC transporter VIBNI_A1218 PF12399 Branched-chain amino acid ATP-binding cassette transporter VIBNI_A1222 PF00005 ABC transporter VIBNI_A1223 PF00732 GMC oxidoreductase VIBNI_A1223 PF05199 GMC oxidoreductase VIBNI_A1225 PF01012 Electron transfer flavoprotein domain VIBNI_A1226 PF01012 Electron transfer flavoprotein domain VIBNI_A1226 PF00766 Electron transfer flavoprotein FAD-binding domain VIBNI_A1227 PF13183 4Fe-4S dicluster domain VIBNI_A1227 PF02754 Cysteine-rich domain VIBNI_A1228 PF00501 AMP-binding enzyme VIBNI_A1228 PF13193 AMP-binding enzyme C-terminal domain VIBNI_A1233 PF00171 Aldehyde dehydrogenase family VIBNI_A1234 PF02803 Thiolase, C-terminal domain VIBNI_A1234 PF00108 Thiolase, N-terminal domain VIBNI_A1238 PF02894 Oxidoreductase family, C-terminal alpha/beta domain VIBNI_A1238 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VIBNI_A1241 PF01547 Bacterial extracellular solute-binding protein VIBNI_A1242 PF02515 CoA-transferase family III VIBNI_A1244 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_A1245 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_A1246 PF00005 ABC transporter VIBNI_A1246 PF03459 TOBE domain VIBNI_A1246 PF17912 MalK OB fold domain VIBNI_A1247 PF03737 Aldolase/RraA VIBNI_A1251 PF02272 DHHA1 domain VIBNI_A1251 PF01411 tRNA synthetases class II (A) VIBNI_A1251 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VIBNI_A1253 PF00149 Calcineurin-like phosphoesterase VIBNI_A1255 PF00155 Aminotransferase class I and II VIBNI_A1255 PF00392 Bacterial regulatory proteins, gntR family VIBNI_A1262 PF04191 Phospholipid methyltransferase VIBNI_A1265 PF00561 alpha/beta hydrolase fold VIBNI_A1265 PF00364 Biotin-requiring enzyme VIBNI_A1270 PF00375 Sodium:dicarboxylate symporter family VIBNI_A1272 PF00291 Pyridoxal-phosphate dependent enzyme VIBNI_A1273 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase VIBNI_A1273 PF00218 Indole-3-glycerol phosphate synthase VIBNI_A1274 PF02885 Glycosyl transferase family, helical bundle domain VIBNI_A1274 PF00591 Glycosyl transferase family, a/b domain VIBNI_A1275 PF00117 Glutamine amidotransferase class-I VIBNI_A1276 PF04715 Anthranilate synthase component I, N terminal region VIBNI_A1276 PF00425 chorismate binding enzyme VIBNI_A1278 PF02811 PHP domain VIBNI_A1279 PF01300 Telomere recombination VIBNI_A1280 PF00849 RNA pseudouridylate synthase VIBNI_A1280 PF01479 S4 domain VIBNI_A1284 PF00701 Dihydrodipicolinate synthetase family VIBNI_A1285 PF07729 FCD domain VIBNI_A1285 PF00392 Bacterial regulatory proteins, gntR family VIBNI_A1287 PF05199 GMC oxidoreductase VIBNI_A1287 PF00732 GMC oxidoreductase VIBNI_A1288 PF00920 Dehydratase family VIBNI_A1290 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_A1291 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_A1293 PF05547 Immune inhibitor A peptidase M6 VIBNI_A1293 PF00801 PKD domain VIBNI_A1294 PF04269 Protein of unknown function, DUF440 VIBNI_A1295 PF08207 Elongation factor P (EF-P) KOW-like domain VIBNI_A1295 PF09285 Elongation factor P, C-terminal VIBNI_A1295 PF01132 Elongation factor P (EF-P) OB domain VIBNI_A1297 PF07963 Prokaryotic N-terminal methylation motif VIBNI_A1297 PF00114 Pilin (bacterial filament) VIBNI_A1298 PF03707 Bacterial signalling protein N terminal repeat VIBNI_A1298 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_A1298 PF00563 EAL domain VIBNI_A1299 PF03315 Serine dehydratase beta chain VIBNI_A1299 PF03313 Serine dehydratase alpha chain VIBNI_A1301 PF08443 RimK-like ATP-grasp domain VIBNI_A1301 PF18030 RimK PreATP-grasp domain VIBNI_A1302 PF08443 RimK-like ATP-grasp domain VIBNI_A1302 PF18030 RimK PreATP-grasp domain VIBNI_A1304 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBNI_A1304 PF00672 HAMP domain VIBNI_A1305 PF00136 DNA polymerase family B VIBNI_A1305 PF03104 DNA polymerase family B, exonuclease domain VIBNI_A1306 PF00072 Response regulator receiver domain VIBNI_A1306 PF00196 Bacterial regulatory proteins, luxR family VIBNI_A1307 PF08459 UvrC Helix-hairpin-helix N-terminal VIBNI_A1307 PF02151 UvrB/uvrC motif VIBNI_A1307 PF01541 GIY-YIG catalytic domain VIBNI_A1308 PF01066 CDP-alcohol phosphatidyltransferase VIBNI_A1309 PF17156 Gammaproteobacterial periplasmic sensor domain VIBNI_A1309 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_A1312 PF02698 DUF218 domain VIBNI_A1315 PF01226 Formate/nitrite transporter VIBNI_A1319 PF04389 Peptidase family M28 VIBNI_A1319 PF02225 PA domain VIBNI_A1321 PF00171 Aldehyde dehydrogenase family VIBNI_A1323 PF00196 Bacterial regulatory proteins, luxR family VIBNI_A1323 PF00072 Response regulator receiver domain VIBNI_A1325 PF00989 PAS fold VIBNI_A1325 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_A1325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_A1326 PF03649 Uncharacterised protein family (UPF0014) VIBNI_A1328 PF06796 Periplasmic nitrate reductase protein NapE VIBNI_A1329 PF03264 NapC/NirT cytochrome c family, N-terminal region VIBNI_A1330 PF01568 Molydopterin dinucleotide binding domain VIBNI_A1330 PF18364 Molybdopterin oxidoreductase N-terminal domain VIBNI_A1330 PF00384 Molybdopterin oxidoreductase VIBNI_A1332 PF01180 Dihydroorotate dehydrogenase VIBNI_A1335 PF01368 DHH family VIBNI_A1335 PF02833 DHHA2 domain VIBNI_A1338 PF00672 HAMP domain VIBNI_A1338 PF17200 Single Cache domain 2 VIBNI_A1338 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBNI_A1340 PF13333 Integrase core domain VIBNI_A1340 PF00665 Integrase core domain VIBNI_A1340 PF13276 HTH-like domain VIBNI_A1341 PF00367 phosphotransferase system, EIIB VIBNI_A1341 PF02378 Phosphotransferase system, EIIC VIBNI_A1341 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VIBNI_A1344 PF00486 Transcriptional regulatory protein, C terminal VIBNI_A1344 PF00072 Response regulator receiver domain VIBNI_A1345 PF00117 Glutamine amidotransferase class-I VIBNI_A1345 PF00958 GMP synthase C terminal domain VIBNI_A1345 PF02540 NAD synthase VIBNI_A1346 PF00465 Iron-containing alcohol dehydrogenase VIBNI_A1347 PF00171 Aldehyde dehydrogenase family VIBNI_A1348 PF00120 Glutamine synthetase, catalytic domain VIBNI_A1350 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VIBNI_A1352 PF01418 Helix-turn-helix domain, rpiR family VIBNI_A1352 PF01380 SIS domain VIBNI_A1355 PF00005 ABC transporter VIBNI_A1356 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VIBNI_A1356 PF00005 ABC transporter VIBNI_A1357 PF12911 N-terminal TM domain of oligopeptide transport permease C VIBNI_A1357 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_A1358 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_A1359 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VIBNI_A1360 PF00158 Sigma-54 interaction domain VIBNI_A1360 PF02954 Bacterial regulatory protein, Fis family VIBNI_A1361 PF04012 PspA/IM30 family VIBNI_A1362 PF06667 Phage shock protein B VIBNI_A1365 PF13533 Biotin-lipoyl like VIBNI_A1366 PF00873 AcrB/AcrD/AcrF family VIBNI_A1367 PF03352 Methyladenine glycosylase VIBNI_A1368 PF01053 Cys/Met metabolism PLP-dependent enzyme VIBNI_A1369 PF13396 Phospholipase_D-nuclease N-terminal VIBNI_A1369 PF13091 PLD-like domain VIBNI_A1370 PF00209 Sodium:neurotransmitter symporter family VIBNI_A1371 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBNI_A1371 PF12729 Four helix bundle sensory module for signal transduction VIBNI_A1371 PF00672 HAMP domain VIBNI_A1372 PF00849 RNA pseudouridylate synthase VIBNI_A1373 PF01170 Putative RNA methylase family UPF0020 VIBNI_A1373 PF02926 THUMP domain VIBNI_A1373 PF10672 S-adenosylmethionine-dependent methyltransferase VIBNI_A1374 PF00072 Response regulator receiver domain VIBNI_A1374 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_A1375 PF02581 Thiamine monophosphate synthase VIBNI_A1376 PF02110 Hydroxyethylthiazole kinase family VIBNI_A1377 PF03070 TENA/THI-4/PQQC family VIBNI_A1378 PF09084 NMT1/THI5 like VIBNI_A1379 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_A1380 PF00005 ABC transporter VIBNI_A1381 PF08543 Phosphomethylpyrimidine kinase VIBNI_A1383 PF00155 Aminotransferase class I and II VIBNI_A1384 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_A1384 PF03466 LysR substrate binding domain VIBNI_A1385 PF03976 Polyphosphate kinase 2 (PPK2) VIBNI_A1387 PF01066 CDP-alcohol phosphatidyltransferase VIBNI_A1388 PF00005 ABC transporter VIBNI_A1389 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_A1390 PF13416 Bacterial extracellular solute-binding protein VIBNI_A1391 PF01641 SelR domain VIBNI_A1391 PF01625 Peptide methionine sulfoxide reductase VIBNI_A1393 PF03795 YCII-related domain VIBNI_A1396 PF03061 Thioesterase superfamily VIBNI_A1397 PF07995 Glucose / Sorbosone dehydrogenase VIBNI_A1402 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain VIBNI_A1402 PF01409 tRNA synthetases class II core domain (F) VIBNI_A1403 PF03147 Ferredoxin-fold anticodon binding domain VIBNI_A1403 PF03484 tRNA synthetase B5 domain VIBNI_A1403 PF03483 B3/4 domain VIBNI_A1403 PF01588 Putative tRNA binding domain VIBNI_A1403 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain VIBNI_A1405 PF02687 FtsX-like permease family VIBNI_A1405 PF12704 MacB-like periplasmic core domain VIBNI_A1406 PF12704 MacB-like periplasmic core domain VIBNI_A1406 PF00005 ABC transporter VIBNI_A1406 PF02687 FtsX-like permease family VIBNI_A1407 PF12704 MacB-like periplasmic core domain VIBNI_A1407 PF02687 FtsX-like permease family VIBNI_A1407 PF00005 ABC transporter VIBNI_A1414 PF02222 ATP-grasp domain VIBNI_A1415 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VIBNI_A1415 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region VIBNI_A1416 PF04172 LrgB-like family VIBNI_A1417 PF03788 LrgA family VIBNI_A1418 PF00929 Exonuclease VIBNI_A1418 PF08411 Exonuclease C-terminal VIBNI_A1420 PF08359 YsiA-like protein, C-terminal region VIBNI_A1420 PF00440 Bacterial regulatory proteins, tetR family VIBNI_A1421 PF03109 ABC1 family VIBNI_A1425 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_A1425 PF17158 Membrane-associated sensor, integral membrane domain VIBNI_A1426 PF00069 Protein kinase domain VIBNI_A1426 PF03793 PASTA domain VIBNI_A1430 PF13677 Membrane MotB of proton-channel complex MotA/MotB VIBNI_A1430 PF00691 OmpA family VIBNI_A1442 PF10431 C-terminal, D2-small domain, of ClpB protein VIBNI_A1442 PF17871 AAA lid domain VIBNI_A1442 PF00004 ATPase family associated with various cellular activities (AAA) VIBNI_A1442 PF07724 AAA domain (Cdc48 subfamily) VIBNI_A1444 PF16671 Actin cross-linking domain VIBNI_A1444 PF04717 Type VI secretion system, phage-baseplate injector VIBNI_A1446 PF03527 RHS protein VIBNI_A1454 PF00665 Integrase core domain VIBNI_A1454 PF13333 Integrase core domain VIBNI_A1454 PF13276 HTH-like domain VIBNI_A1455 PF02378 Phosphotransferase system, EIIC VIBNI_A1455 PF00367 phosphotransferase system, EIIB VIBNI_A1456 PF10688 Bacterial inner membrane protein VIBNI_A1462 PF07885 Ion channel VIBNI_A1462 PF02254 TrkA-N domain VIBNI_A1463 PF01872 RibD C-terminal domain VIBNI_A1465 PF01274 Malate synthase VIBNI_A1467 PF13460 NAD(P)H-binding VIBNI_A1468 PF01810 LysE type translocator VIBNI_A1469 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBNI_A1469 PF00672 HAMP domain VIBNI_A1469 PF02743 Cache domain VIBNI_A1470 PF01627 Hpt domain VIBNI_A1470 PF00072 Response regulator receiver domain VIBNI_A1470 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VIBNI_A1470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_A1470 PF00672 HAMP domain VIBNI_A1470 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_A1473 PF00563 EAL domain VIBNI_A1473 PF12792 CSS motif domain associated with EAL VIBNI_A1474 PF02397 Bacterial sugar transferase VIBNI_A1476 PF13439 Glycosyltransferase Family 4 VIBNI_A1476 PF00534 Glycosyl transferases group 1 VIBNI_A1480 PF00132 Bacterial transferase hexapeptide (six repeats) VIBNI_A1480 PF12464 Maltose acetyltransferase VIBNI_A1484 PF00158 Sigma-54 interaction domain VIBNI_A1484 PF02954 Bacterial regulatory protein, Fis family VIBNI_A1484 PF00072 Response regulator receiver domain VIBNI_A1485 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VIBNI_A1485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_A1485 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_A1485 PF01627 Hpt domain VIBNI_A1485 PF00072 Response regulator receiver domain VIBNI_A1485 PF00672 HAMP domain VIBNI_A1487 PF13614 AAA domain VIBNI_A1488 PF02563 Polysaccharide biosynthesis/export protein VIBNI_A1488 PF10531 SLBB domain VIBNI_A1489 PF00691 OmpA family VIBNI_A1489 PF01389 OmpA-like transmembrane domain VIBNI_A1490 PF01740 STAS domain VIBNI_A1493 PF02654 Cobalamin-5-phosphate synthase VIBNI_A1494 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase VIBNI_A1499 PF02653 Branched-chain amino acid transport system / permease component VIBNI_A1500 PF00005 ABC transporter VIBNI_A1503 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) VIBNI_A1504 PF01418 Helix-turn-helix domain, rpiR family VIBNI_A1504 PF01380 SIS domain VIBNI_A1505 PF13419 Haloacid dehalogenase-like hydrolase VIBNI_A1506 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VIBNI_A1506 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VIBNI_A1507 PF00171 Aldehyde dehydrogenase family VIBNI_A1509 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VIBNI_A1509 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VIBNI_A1509 PF01842 ACT domain VIBNI_A1511 PF00171 Aldehyde dehydrogenase family VIBNI_A1512 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family VIBNI_A1513 PF01032 FecCD transport family VIBNI_A1515 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VIBNI_A1515 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VIBNI_A1518 PF00271 Helicase conserved C-terminal domain VIBNI_A1518 PF00270 DEAD/DEAH box helicase VIBNI_A1520 PF01274 Malate synthase VIBNI_A1521 PF00463 Isocitrate lyase family VIBNI_A1543 PF13407 Periplasmic binding protein domain VIBNI_A1544 PF00005 ABC transporter VIBNI_A1545 PF02653 Branched-chain amino acid transport system / permease component VIBNI_A1546 PF00392 Bacterial regulatory proteins, gntR family VIBNI_A1546 PF07729 FCD domain VIBNI_A1549 PF06314 Acetoacetate decarboxylase (ADC) VIBNI_A1550 PF05336 L-rhamnose mutarotase VIBNI_A1551 PF00106 short chain dehydrogenase VIBNI_A1552 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VIBNI_A1552 PF01842 ACT domain VIBNI_A1552 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VIBNI_A1553 PF13378 Enolase C-terminal domain-like VIBNI_A1553 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain VIBNI_A1557 PF03880 DbpA RNA binding domain VIBNI_A1557 PF00270 DEAD/DEAH box helicase VIBNI_A1557 PF00271 Helicase conserved C-terminal domain VIBNI_A1559 PF07690 Major Facilitator Superfamily VIBNI_A1560 PF03466 LysR substrate binding domain VIBNI_A1560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_A1562 PF08678 Rsbr N terminal VIBNI_A1562 PF01740 STAS domain VIBNI_A1564 PF13581 Histidine kinase-like ATPase domain VIBNI_A1566 PF01627 Hpt domain VIBNI_A1566 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_A1566 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_A1566 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VIBNI_A1566 PF00672 HAMP domain VIBNI_A1566 PF00072 Response regulator receiver domain VIBNI_A1567 PF00072 Response regulator receiver domain VIBNI_A1570 PF01863 Protein of unknown function DUF45 VIBNI_A1571 PF05971 RNA methyltransferase VIBNI_A1573 PF03707 Bacterial signalling protein N terminal repeat VIBNI_A1573 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_A1573 PF00563 EAL domain VIBNI_A1574 PF08447 PAS fold VIBNI_A1574 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBNI_A1576 PF03707 Bacterial signalling protein N terminal repeat VIBNI_A1576 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_A1576 PF00563 EAL domain VIBNI_A1576 PF13188 PAS domain VIBNI_A1591 PF00072 Response regulator receiver domain VIBNI_A1591 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_A1594 PF01546 Peptidase family M20/M25/M40 VIBNI_A1594 PF07687 Peptidase dimerisation domain VIBNI_A1596 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VIBNI_A1597 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_A1597 PF17151 Periplasmic sensor domain VIBNI_A1598 PF00563 EAL domain VIBNI_A1598 PF05231 MASE1 VIBNI_A1600 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_A1600 PF00563 EAL domain VIBNI_A1600 PF03707 Bacterial signalling protein N terminal repeat VIBNI_A1604 PF09588 YqaJ-like viral recombinase domain VIBNI_A1657 PF01554 MatE VIBNI_A1658 PF00677 Lumazine binding domain VIBNI_A1661 PF01339 CheB methylesterase VIBNI_A1661 PF00072 Response regulator receiver domain VIBNI_A1662 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_A1662 PF05230 MASE2 domain VIBNI_A1664 PF00877 NlpC/P60 family VIBNI_A1665 PF00672 HAMP domain VIBNI_A1665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBNI_A1665 PF02743 Cache domain VIBNI_A1669 PF00480 ROK family VIBNI_A1671 PF03453 MoeA N-terminal region (domain I and II) VIBNI_A1671 PF03454 MoeA C-terminal region (domain IV) VIBNI_A1671 PF00994 Probable molybdopterin binding domain VIBNI_A1673 PF00005 ABC transporter VIBNI_A1674 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_A1675 PF12849 PBP superfamily domain VIBNI_A1677 PF00158 Sigma-54 interaction domain VIBNI_A1677 PF00072 Response regulator receiver domain VIBNI_A1677 PF02954 Bacterial regulatory protein, Fis family VIBNI_A1678 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_A1678 PF00989 PAS fold VIBNI_A1678 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_A1679 PF12848 ABC transporter VIBNI_A1679 PF00005 ABC transporter VIBNI_A1682 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_A1683 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_A1684 PF00005 ABC transporter VIBNI_A1684 PF17912 MalK OB fold domain VIBNI_A1685 PF01232 Mannitol dehydrogenase Rossmann domain VIBNI_A1685 PF08125 Mannitol dehydrogenase C-terminal domain VIBNI_A1688 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VIBNI_A1688 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VIBNI_A1691 PF05656 Protein of unknown function (DUF805) VIBNI_A1692 PF12833 Helix-turn-helix domain VIBNI_A1692 PF06445 GyrI-like small molecule binding domain VIBNI_A1694 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_A1694 PF03466 LysR substrate binding domain VIBNI_A1695 PF02694 Uncharacterised BCR, YnfA/UPF0060 family VIBNI_A1700 PF13302 Acetyltransferase (GNAT) domain VIBNI_A1701 PF08241 Methyltransferase domain VIBNI_A1704 PF00293 NUDIX domain VIBNI_A1709 PF02743 Cache domain VIBNI_A1709 PF00672 HAMP domain VIBNI_A1709 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBNI_A1710 PF02634 FdhD/NarQ family VIBNI_A1716 PF00384 Molybdopterin oxidoreductase VIBNI_A1716 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VIBNI_A1716 PF01568 Molydopterin dinucleotide binding domain VIBNI_A1717 PF13247 4Fe-4S dicluster domain VIBNI_A1720 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_A1720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_A1720 PF18719 ArlS sensor domain VIBNI_A1723 PF00909 Ammonium Transporter Family VIBNI_A1724 PF02146 Sir2 family VIBNI_A1726 PF13416 Bacterial extracellular solute-binding protein VIBNI_A1727 PF13416 Bacterial extracellular solute-binding protein VIBNI_A1728 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_A1729 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_A1730 PF08402 TOBE domain VIBNI_A1730 PF00005 ABC transporter VIBNI_A1735 PF02056 Family 4 glycosyl hydrolase VIBNI_A1735 PF11975 Family 4 glycosyl hydrolase C-terminal domain VIBNI_A1736 PF01171 PP-loop family VIBNI_A1737 PF00582 Universal stress protein family VIBNI_A1738 PF00027 Cyclic nucleotide-binding domain VIBNI_A1738 PF13545 Crp-like helix-turn-helix domain VIBNI_A1741 PF00403 Heavy-metal-associated domain VIBNI_A1743 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP VIBNI_A1743 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VIBNI_A1746 PF00115 Cytochrome C and Quinol oxidase polypeptide I VIBNI_A1749 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_A1749 PF09308 LuxQ, periplasmic VIBNI_A1749 PF00072 Response regulator receiver domain VIBNI_A1749 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_A1754 PF05035 2-keto-3-deoxy-galactonokinase VIBNI_A1755 PF01081 KDPG and KHG aldolase VIBNI_A1756 PF13378 Enolase C-terminal domain-like VIBNI_A1756 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain VIBNI_A1761 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VIBNI_A1762 PF00005 ABC transporter VIBNI_A1763 PF02653 Branched-chain amino acid transport system / permease component VIBNI_A1764 PF00378 Enoyl-CoA hydratase/isomerase VIBNI_A1765 PF02515 CoA-transferase family III VIBNI_A1766 PF03480 Bacterial extracellular solute-binding protein, family 7 VIBNI_A1768 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VIBNI_A1768 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component VIBNI_A1769 PF08450 SMP-30/Gluconolactonase/LRE-like region VIBNI_A1771 PF00550 Phosphopantetheine attachment site VIBNI_A1771 PF00668 Condensation domain VIBNI_A1771 PF13193 AMP-binding enzyme C-terminal domain VIBNI_A1771 PF00501 AMP-binding enzyme VIBNI_A1771 PF00975 Thioesterase domain VIBNI_A1777 PF06303 MatP N-terminal domain VIBNI_A1777 PF17414 MatP C-terminal ribbon-helix-helix domain VIBNI_A1779 PF05362 Lon protease (S16) C-terminal proteolytic domain VIBNI_A1779 PF13654 AAA domain VIBNI_A1780 PF07977 FabA-like domain VIBNI_A1781 PF04957 Ribosome modulation factor VIBNI_A1783 PF12848 ABC transporter VIBNI_A1783 PF16326 ABC transporter C-terminal domain VIBNI_A1783 PF00005 ABC transporter VIBNI_A1785 PF10672 S-adenosylmethionine-dependent methyltransferase VIBNI_A1785 PF01170 Putative RNA methylase family UPF0020 VIBNI_A1785 PF02926 THUMP domain VIBNI_A1786 PF07126 Cell-division protein ZapC VIBNI_A1788 PF05088 Bacterial NAD-glutamate dehydrogenase VIBNI_A1790 PF01433 Peptidase family M1 domain VIBNI_A1790 PF11940 Domain of unknown function (DUF3458) Ig-like fold VIBNI_A1790 PF17432 Domain of unknown function (DUF3458_C) ARM repeats VIBNI_A1792 PF03572 Peptidase family S41 VIBNI_A1792 PF00595 PDZ domain VIBNI_A1792 PF11818 C-terminal domain of tail specific protease (DUF3340) VIBNI_A1792 PF17804 Tail specific protease N-terminal domain VIBNI_A1793 PF04352 ProQ/FINO family VIBNI_A1793 PF17516 ProQ C-terminal domain VIBNI_A1794 PF13185 GAF domain VIBNI_A1795 PF00664 ABC transporter transmembrane region VIBNI_A1795 PF00005 ABC transporter VIBNI_A1796 PF04403 Paraquat-inducible protein A VIBNI_A1797 PF02470 MlaD protein VIBNI_A1798 PF01189 16S rRNA methyltransferase RsmB/F VIBNI_A1798 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF VIBNI_A1798 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF VIBNI_A1802 PF00793 DAHP synthetase I family VIBNI_A1804 PF10414 Sirohaem synthase dimerisation region VIBNI_A1804 PF14824 Sirohaem biosynthesis protein central VIBNI_A1804 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VIBNI_A1806 PF00497 Bacterial extracellular solute-binding proteins, family 3 VIBNI_A1807 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_A1808 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_A1809 PF00005 ABC transporter VIBNI_A1810 PF01027 Inhibitor of apoptosis-promoting Bax1 VIBNI_A1811 PF04358 DsrC like protein VIBNI_A1812 PF00708 Acylphosphatase VIBNI_A1813 PF02743 Cache domain VIBNI_A1813 PF00672 HAMP domain VIBNI_A1813 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBNI_A1814 PF17785 PUA-like domain VIBNI_A1814 PF10672 S-adenosylmethionine-dependent methyltransferase VIBNI_A1815 PF00665 Integrase core domain VIBNI_A1815 PF13333 Integrase core domain VIBNI_A1815 PF13276 HTH-like domain VIBNI_A1824 PF17158 Membrane-associated sensor, integral membrane domain VIBNI_A1824 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_A1825 PF06508 Queuosine biosynthesis protein QueC VIBNI_A1826 PF04055 Radical SAM superfamily VIBNI_A1829 PF16177 Acetyl-coenzyme A synthetase N-terminus VIBNI_A1829 PF00501 AMP-binding enzyme VIBNI_A1829 PF13193 AMP-binding enzyme C-terminal domain VIBNI_A1830 PF03972 MmgE/PrpD family VIBNI_A1831 PF00285 Citrate synthase, C-terminal domain VIBNI_A1836 PF01970 Tripartite tricarboxylate transporter TctA family VIBNI_A1837 PF10127 RNA repair pathway DNA polymerase beta family VIBNI_A1840 PF01139 tRNA-splicing ligase RtcB VIBNI_A1842 PF06956 Regulator of RNA terminal phosphate cyclase VIBNI_A1842 PF00158 Sigma-54 interaction domain VIBNI_A1847 PF00072 Response regulator receiver domain VIBNI_A1848 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_A1848 PF00989 PAS fold VIBNI_A1848 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain VIBNI_A1848 PF17203 Single cache domain 3 VIBNI_A1850 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VIBNI_A1857 PF00196 Bacterial regulatory proteins, luxR family VIBNI_A1857 PF00072 Response regulator receiver domain VIBNI_A1858 PF07730 Histidine kinase VIBNI_A1858 PF17200 Single Cache domain 2 VIBNI_A1859 PF03480 Bacterial extracellular solute-binding protein, family 7 VIBNI_A1861 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VIBNI_A1864 PF01235 Sodium:alanine symporter family VIBNI_A1866 PF01810 LysE type translocator VIBNI_A1867 PF02074 Carboxypeptidase Taq (M32) metallopeptidase VIBNI_A1869 PF12833 Helix-turn-helix domain VIBNI_A1869 PF00072 Response regulator receiver domain VIBNI_A1870 PF13580 SIS domain VIBNI_A1871 PF03932 CutC family VIBNI_A1872 PF03932 CutC family VIBNI_A1874 PF01037 Lrp/AsnC ligand binding domain VIBNI_A1875 PF02627 Carboxymuconolactone decarboxylase family VIBNI_A1877 PF13087 AAA domain VIBNI_A1877 PF13086 AAA domain VIBNI_A1877 PF13195 Protein of unknown function (DUF4011) VIBNI_A1877 PF13086 AAA domain VIBNI_A1877 PF13087 AAA domain VIBNI_A1877 PF13195 Protein of unknown function (DUF4011) VIBNI_A1880 PF09330 D-lactate dehydrogenase, membrane binding VIBNI_A1880 PF01565 FAD binding domain VIBNI_A1881 PF01261 Xylose isomerase-like TIM barrel VIBNI_A1882 PF03707 Bacterial signalling protein N terminal repeat VIBNI_A1882 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_A1882 PF00563 EAL domain VIBNI_A1884 PF13407 Periplasmic binding protein domain VIBNI_A1885 PF00668 Condensation domain VIBNI_A1885 PF00550 Phosphopantetheine attachment site VIBNI_A1885 PF02801 Beta-ketoacyl synthase, C-terminal domain VIBNI_A1885 PF14765 Polyketide synthase dehydratase VIBNI_A1885 PF16197 Ketoacyl-synthetase C-terminal extension VIBNI_A1885 PF00501 AMP-binding enzyme VIBNI_A1885 PF00109 Beta-ketoacyl synthase, N-terminal domain VIBNI_A1885 PF08659 KR domain VIBNI_A1885 PF13193 AMP-binding enzyme C-terminal domain VIBNI_A1886 PF00501 AMP-binding enzyme VIBNI_A1886 PF13193 AMP-binding enzyme C-terminal domain VIBNI_A1886 PF00668 Condensation domain VIBNI_A1886 PF00550 Phosphopantetheine attachment site VIBNI_A1887 PF00550 Phosphopantetheine attachment site VIBNI_A1887 PF00501 AMP-binding enzyme VIBNI_A1887 PF13193 AMP-binding enzyme C-terminal domain VIBNI_A1887 PF07993 Male sterility protein VIBNI_A1887 PF00668 Condensation domain VIBNI_A1893 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold VIBNI_A1893 PF00271 Helicase conserved C-terminal domain VIBNI_A1893 PF04408 Helicase associated domain (HA2) VIBNI_A1893 PF00270 DEAD/DEAH box helicase VIBNI_A1893 PF11898 Domain of unknown function (DUF3418) VIBNI_A1894 PF00535 Glycosyl transferase family 2 VIBNI_A1897 PF02525 Flavodoxin-like fold VIBNI_A1900 PF00596 Class II Aldolase and Adducin N-terminal domain VIBNI_A1901 PF01261 Xylose isomerase-like TIM barrel VIBNI_A1902 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family VIBNI_A1903 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VIBNI_A1903 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VIBNI_A1904 PF10282 Lactonase, 7-bladed beta-propeller VIBNI_A1905 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_A1906 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_A1909 PF00005 ABC transporter VIBNI_A1909 PF17912 MalK OB fold domain VIBNI_A1909 PF03459 TOBE domain VIBNI_A1910 PF00392 Bacterial regulatory proteins, gntR family VIBNI_A1910 PF07729 FCD domain VIBNI_A1920 PF00437 Type II/IV secretion system protein VIBNI_A1923 PF13629 Pilus formation protein N terminal region VIBNI_A1923 PF00263 Bacterial type II and III secretion system protein VIBNI_A1923 PF04972 BON domain VIBNI_A1926 PF03466 LysR substrate binding domain VIBNI_A1926 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_A1927 PF00356 Bacterial regulatory proteins, lacI family VIBNI_A1929 PF03480 Bacterial extracellular solute-binding protein, family 7 VIBNI_A1930 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component VIBNI_A1931 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VIBNI_A1934 PF08240 Alcohol dehydrogenase GroES-like domain VIBNI_A1934 PF00107 Zinc-binding dehydrogenase VIBNI_A1935 PF00392 Bacterial regulatory proteins, gntR family VIBNI_A1935 PF07702 UTRA domain VIBNI_A1946 PF00561 alpha/beta hydrolase fold VIBNI_A1950 PF00092 von Willebrand factor type A domain VIBNI_A1950 PF12450 von Willebrand factor VIBNI_A1950 PF12034 Domain of unknown function (DUF3520) VIBNI_A1953 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_A1956 PF00012 Hsp70 protein VIBNI_A1957 PF00012 Hsp70 protein VIBNI_A1959 PF01906 Putative heavy-metal-binding VIBNI_A1968 PF03358 NADPH-dependent FMN reductase VIBNI_A1969 PF00465 Iron-containing alcohol dehydrogenase VIBNI_A1975 PF13302 Acetyltransferase (GNAT) domain VIBNI_A1976 PF00158 Sigma-54 interaction domain VIBNI_A1976 PF18024 Helix-turn-helix domain VIBNI_A1977 PF05128 Domain of unknown function (DUF697) VIBNI_A1978 PF04317 YcjX-like family, DUF463 VIBNI_A1981 PF04715 Anthranilate synthase component I, N terminal region VIBNI_A1981 PF00425 chorismate binding enzyme VIBNI_A1982 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_A1982 PF00072 Response regulator receiver domain VIBNI_A1982 PF01627 Hpt domain VIBNI_A1982 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_A1984 PF00293 NUDIX domain VIBNI_A1985 PF03222 Tryptophan/tyrosine permease family VIBNI_A1986 PF03315 Serine dehydratase beta chain VIBNI_A1986 PF03313 Serine dehydratase alpha chain VIBNI_A1988 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_A1988 PF03466 LysR substrate binding domain VIBNI_A1990 PF00107 Zinc-binding dehydrogenase VIBNI_A1990 PF08240 Alcohol dehydrogenase GroES-like domain VIBNI_A1998 PF06271 RDD family VIBNI_A2007 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBNI_A2007 PF12729 Four helix bundle sensory module for signal transduction VIBNI_A2007 PF00672 HAMP domain VIBNI_A2008 PF00152 tRNA synthetases class II (D, K and N) VIBNI_A2008 PF01336 OB-fold nucleic acid binding domain VIBNI_A2009 PF00672 HAMP domain VIBNI_A2009 PF01966 HD domain VIBNI_A2010 PF00155 Aminotransferase class I and II VIBNI_A2011 PF00571 CBS domain VIBNI_A2012 PF07733 Bacterial DNA polymerase III alpha NTPase domain VIBNI_A2012 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VIBNI_A2012 PF14579 Helix-hairpin-helix motif VIBNI_A2012 PF02811 PHP domain VIBNI_A2012 PF00929 Exonuclease VIBNI_A2013 PF02028 BCCT, betaine/carnitine/choline family transporter VIBNI_A2014 PF01047 MarR family VIBNI_A2015 PF00196 Bacterial regulatory proteins, luxR family VIBNI_A2015 PF00072 Response regulator receiver domain VIBNI_A2017 PF18766 SWI2/SNF2 ATPase VIBNI_A2017 PF11867 Domain of unknown function (DUF3387) VIBNI_A2017 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) VIBNI_A2020 PF01420 Type I restriction modification DNA specificity domain VIBNI_A2021 PF02384 N-6 DNA Methylase VIBNI_A2023 PF13401 AAA domain VIBNI_A2023 PF11426 Tn7 transposition regulator TnsC VIBNI_A2025 PF08722 TnsA endonuclease N terminal VIBNI_A2025 PF08721 TnsA endonuclease C terminal VIBNI_A2027 PF17200 Single Cache domain 2 VIBNI_A2027 PF07730 Histidine kinase VIBNI_A2028 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VIBNI_A2030 PF03480 Bacterial extracellular solute-binding protein, family 7 VIBNI_A2033 PF00753 Metallo-beta-lactamase superfamily VIBNI_A2034 PF05951 Bacterial protein of unknown function (DUF882) VIBNI_A2036 PF01471 Putative peptidoglycan binding domain VIBNI_A2036 PF03734 L,D-transpeptidase catalytic domain VIBNI_A2041 PF00925 GTP cyclohydrolase II VIBNI_A2043 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VIBNI_A2043 PF00072 Response regulator receiver domain VIBNI_A2043 PF00672 HAMP domain VIBNI_A2043 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_A2043 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_A2043 PF01627 Hpt domain VIBNI_A2045 PF01590 GAF domain VIBNI_A2045 PF00360 Phytochrome region VIBNI_A2045 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_A2045 PF00563 EAL domain VIBNI_A2046 PF12729 Four helix bundle sensory module for signal transduction VIBNI_A2046 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBNI_A2046 PF00672 HAMP domain VIBNI_A2049 PF08361 MAATS-type transcriptional repressor, C-terminal region VIBNI_A2049 PF00440 Bacterial regulatory proteins, tetR family VIBNI_A2050 PF03989 DNA gyrase C-terminal domain, beta-propeller VIBNI_A2050 PF00521 DNA gyrase/topoisomerase IV, subunit A VIBNI_A2053 PF02867 Ribonucleotide reductase, barrel domain VIBNI_A2053 PF03477 ATP cone domain VIBNI_A2053 PF00317 Ribonucleotide reductase, all-alpha domain VIBNI_A2054 PF00268 Ribonucleotide reductase, small chain VIBNI_A2057 PF00994 Probable molybdopterin binding domain VIBNI_A2057 PF02464 Competence-damaged protein VIBNI_A2065 PF00005 ABC transporter VIBNI_A2066 PF02653 Branched-chain amino acid transport system / permease component VIBNI_A2067 PF13407 Periplasmic binding protein domain VIBNI_A2069 PF00356 Bacterial regulatory proteins, lacI family VIBNI_A2070 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain VIBNI_A2071 PF03435 Saccharopine dehydrogenase NADP binding domain VIBNI_A2071 PF16653 Saccharopine dehydrogenase C-terminal domain VIBNI_A2072 PF00202 Aminotransferase class-III VIBNI_A2075 PF00072 Response regulator receiver domain VIBNI_A2079 PF00583 Acetyltransferase (GNAT) family VIBNI_A2087 PF01632 Ribosomal protein L35 VIBNI_A2088 PF05198 Translation initiation factor IF-3, N-terminal domain VIBNI_A2088 PF00707 Translation initiation factor IF-3, C-terminal domain VIBNI_A2089 PF02824 TGS domain VIBNI_A2089 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VIBNI_A2089 PF03129 Anticodon binding domain VIBNI_A2089 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VIBNI_A2090 PF13419 Haloacid dehalogenase-like hydrolase VIBNI_A2091 PF14376 Haem-binding domain VIBNI_A2091 PF00034 Cytochrome c VIBNI_A2091 PF03150 Di-haem cytochrome c peroxidase VIBNI_A2092 PF00072 Response regulator receiver domain VIBNI_A2092 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_A2092 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_A2092 PF09308 LuxQ, periplasmic VIBNI_A2093 PF00472 RF-1 domain VIBNI_A2095 PF01926 50S ribosome-binding GTPase VIBNI_A2095 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal VIBNI_A2098 PF00171 Aldehyde dehydrogenase family VIBNI_A2099 PF00202 Aminotransferase class-III VIBNI_A2101 PF03576 Peptidase family S58 VIBNI_A2102 PF12833 Helix-turn-helix domain VIBNI_A2102 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term VIBNI_A2103 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_A2103 PF03466 LysR substrate binding domain VIBNI_A2104 PF04310 MukB N-terminal VIBNI_A2104 PF16330 MukB hinge domain VIBNI_A2105 PF04288 MukE-like family VIBNI_A2106 PF17192 MukF middle domain VIBNI_A2106 PF03882 MukF winged-helix domain VIBNI_A2106 PF17193 MukF C-terminal domain VIBNI_A2109 PF02698 DUF218 domain VIBNI_A2110 PF00486 Transcriptional regulatory protein, C terminal VIBNI_A2110 PF00072 Response regulator receiver domain VIBNI_A2112 PF02613 Nitrate reductase delta subunit VIBNI_A2114 PF04994 TfoX C-terminal domain VIBNI_A2114 PF04993 TfoX N-terminal domain VIBNI_A2116 PF00561 alpha/beta hydrolase fold VIBNI_A2117 PF00534 Glycosyl transferases group 1 VIBNI_A2117 PF08323 Starch synthase catalytic domain VIBNI_A2118 PF00483 Nucleotidyl transferase VIBNI_A2120 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_A2120 PF03707 Bacterial signalling protein N terminal repeat VIBNI_A2120 PF00563 EAL domain VIBNI_A2121 PF01396 Topoisomerase DNA binding C4 zinc finger VIBNI_A2121 PF01751 Toprim domain VIBNI_A2121 PF08272 Topoisomerase I zinc-ribbon-like VIBNI_A2121 PF01131 DNA topoisomerase VIBNI_A2122 PF10692 Protein of unknown function (DUF2498) VIBNI_A2125 PF03588 Leucyl/phenylalanyl-tRNA protein transferase VIBNI_A2126 PF04376 Arginine-tRNA-protein transferase, N terminus VIBNI_A2126 PF04377 Arginine-tRNA-protein transferase, C terminus VIBNI_A2127 PF01176 Translation initiation factor 1A / IF-1 VIBNI_A2128 PF00144 Beta-lactamase VIBNI_A2129 PF10431 C-terminal, D2-small domain, of ClpB protein VIBNI_A2129 PF00004 ATPase family associated with various cellular activities (AAA) VIBNI_A2129 PF07724 AAA domain (Cdc48 subfamily) VIBNI_A2129 PF02861 Clp amino terminal domain, pathogenicity island component VIBNI_A2129 PF17871 AAA lid domain VIBNI_A2130 PF02617 ATP-dependent Clp protease adaptor protein ClpS VIBNI_A2131 PF00313 'Cold-shock' DNA-binding domain VIBNI_A2132 PF03971 Monomeric isocitrate dehydrogenase VIBNI_A2134 PF00849 RNA pseudouridylate synthase VIBNI_A2136 PF04356 Protein of unknown function (DUF489) VIBNI_A2137 PF08328 Adenylosuccinate lyase C-terminal VIBNI_A2137 PF00206 Lyase VIBNI_A2138 PF12729 Four helix bundle sensory module for signal transduction VIBNI_A2138 PF00672 HAMP domain VIBNI_A2138 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBNI_A2139 PF01168 Alanine racemase, N-terminal domain VIBNI_A2139 PF00842 Alanine racemase, C-terminal domain VIBNI_A2140 PF00535 Glycosyl transferase family 2 VIBNI_A2141 PF08007 Cupin superfamily protein VIBNI_A2142 PF00672 HAMP domain VIBNI_A2142 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBNI_A2143 PF00294 pfkB family carbohydrate kinase VIBNI_A2144 PF00171 Aldehyde dehydrogenase family VIBNI_A2152 PF00356 Bacterial regulatory proteins, lacI family VIBNI_A2155 PF00005 ABC transporter VIBNI_A2156 PF02653 Branched-chain amino acid transport system / permease component VIBNI_A2157 PF01261 Xylose isomerase-like TIM barrel VIBNI_A2158 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VIBNI_A2158 PF00205 Thiamine pyrophosphate enzyme, central domain VIBNI_A2158 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VIBNI_A2159 PF02894 Oxidoreductase family, C-terminal alpha/beta domain VIBNI_A2159 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VIBNI_A2160 PF00294 pfkB family carbohydrate kinase VIBNI_A2162 PF01116 Fructose-bisphosphate aldolase class-II VIBNI_A2163 PF02894 Oxidoreductase family, C-terminal alpha/beta domain VIBNI_A2163 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VIBNI_A2167 PF00005 ABC transporter VIBNI_A2168 PF02361 Cobalt transport protein VIBNI_A2169 PF02632 BioY family VIBNI_A2173 PF01380 SIS domain VIBNI_A2173 PF01418 Helix-turn-helix domain, rpiR family VIBNI_A2174 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VIBNI_A2174 PF02894 Oxidoreductase family, C-terminal alpha/beta domain VIBNI_A2175 PF04962 KduI/IolB family VIBNI_A2178 PF00892 EamA-like transporter family VIBNI_A2185 PF08212 Lipocalin-like domain VIBNI_A2195 PF01032 FecCD transport family VIBNI_A2197 PF00005 ABC transporter VIBNI_A2201 PF03372 Endonuclease/Exonuclease/phosphatase family VIBNI_A2202 PF06965 Na+/H+ antiporter 1 VIBNI_A2206 PF00005 ABC transporter VIBNI_A2207 PF01554 MatE VIBNI_A2208 PF11066 Protein of unknown function (DUF2867) VIBNI_A2208 PF13460 NAD(P)H-binding VIBNI_A2210 PF07690 Major Facilitator Superfamily VIBNI_A2211 PF00849 RNA pseudouridylate synthase VIBNI_A2211 PF01479 S4 domain VIBNI_A2212 PF00271 Helicase conserved C-terminal domain VIBNI_A2212 PF04851 Type III restriction enzyme, res subunit VIBNI_A2214 PF03466 LysR substrate binding domain VIBNI_A2214 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_A2217 PF00486 Transcriptional regulatory protein, C terminal VIBNI_A2217 PF00072 Response regulator receiver domain VIBNI_A2218 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_A2218 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_A2218 PF00672 HAMP domain VIBNI_A2220 PF00535 Glycosyl transferase family 2 VIBNI_A2221 PF01386 Ribosomal L25p family VIBNI_A2222 PF00704 Glycosyl hydrolases family 18 VIBNI_A2222 PF06483 Chitinase C VIBNI_A2224 PF01717 Cobalamin-independent synthase, Catalytic domain VIBNI_A2224 PF08267 Cobalamin-independent synthase, N-terminal domain VIBNI_A2225 PF03466 LysR substrate binding domain VIBNI_A2225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_A2228 PF08447 PAS fold VIBNI_A2228 PF00563 EAL domain VIBNI_A2228 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_A2228 PF08448 PAS fold VIBNI_A2231 PF00072 Response regulator receiver domain VIBNI_A2231 PF09308 LuxQ, periplasmic VIBNI_A2231 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_A2231 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_A2232 PF04055 Radical SAM superfamily VIBNI_A2232 PF08497 Radical SAM N-terminal VIBNI_A2232 PF11842 Domain of unknown function (DUF3362) VIBNI_A2234 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase VIBNI_A2237 PF00266 Aminotransferase class-V VIBNI_A2241 PF04851 Type III restriction enzyme, res subunit VIBNI_A2241 PF00271 Helicase conserved C-terminal domain VIBNI_A2241 PF02151 UvrB/uvrC motif VIBNI_A2241 PF12344 Ultra-violet resistance protein B VIBNI_A2241 PF17757 UvrB interaction domain VIBNI_A2249 PF06610 L-alanine exporter VIBNI_A2251 PF09308 LuxQ, periplasmic VIBNI_A2251 PF00072 Response regulator receiver domain VIBNI_A2251 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_A2251 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_A2253 PF02445 Quinolinate synthetase A protein VIBNI_A2254 PF16331 TolA binding protein trimerisation VIBNI_A2254 PF13174 Tetratricopeptide repeat VIBNI_A2256 PF00691 OmpA family VIBNI_A2257 PF07676 WD40-like Beta Propeller Repeat VIBNI_A2257 PF04052 TolB amino-terminal domain VIBNI_A2259 PF02472 Biopolymer transport protein ExbD/TolR VIBNI_A2260 PF01618 MotA/TolQ/ExbB proton channel family VIBNI_A2261 PF03061 Thioesterase superfamily VIBNI_A2263 PF02322 Cytochrome bd terminal oxidase subunit II VIBNI_A2264 PF01654 Cytochrome bd terminal oxidase subunit I VIBNI_A2265 PF17864 RuvB AAA lid domain VIBNI_A2265 PF05496 Holliday junction DNA helicase RuvB P-loop domain VIBNI_A2265 PF05491 RuvB C-terminal winged helix domain VIBNI_A2267 PF02075 Crossover junction endodeoxyribonuclease RuvC VIBNI_A2268 PF01709 Transcriptional regulator VIBNI_A2269 PF01336 OB-fold nucleic acid binding domain VIBNI_A2269 PF00152 tRNA synthetases class II (D, K and N) VIBNI_A2269 PF02938 GAD domain VIBNI_A2276 PF08443 RimK-like ATP-grasp domain VIBNI_A2276 PF18030 RimK PreATP-grasp domain VIBNI_A2279 PF00265 Thymidine kinase VIBNI_A2280 PF01406 tRNA synthetases class I (C) catalytic domain VIBNI_A2280 PF09190 DALR domain VIBNI_A2281 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VIBNI_A2282 PF00149 Calcineurin-like phosphoesterase VIBNI_A2283 PF08668 HDOD domain VIBNI_A2283 PF00563 EAL domain VIBNI_A2284 PF02810 SEC-C motif VIBNI_A2285 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase VIBNI_A2285 PF01502 Phosphoribosyl-AMP cyclohydrolase VIBNI_A2286 PF00977 Histidine biosynthesis protein VIBNI_A2287 PF00977 Histidine biosynthesis protein VIBNI_A2288 PF00117 Glutamine amidotransferase class-I VIBNI_A2289 PF00475 Imidazoleglycerol-phosphate dehydratase VIBNI_A2289 PF08645 Polynucleotide kinase 3 phosphatase VIBNI_A2290 PF00155 Aminotransferase class I and II VIBNI_A2291 PF00815 Histidinol dehydrogenase VIBNI_A2292 PF08029 HisG, C-terminal domain VIBNI_A2292 PF01634 ATP phosphoribosyltransferase VIBNI_A2293 PF03553 Na+/H+ antiporter family VIBNI_A2294 PF00816 H-NS histone family VIBNI_A2297 PF07733 Bacterial DNA polymerase III alpha NTPase domain VIBNI_A2297 PF01336 OB-fold nucleic acid binding domain VIBNI_A2297 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VIBNI_A2297 PF02811 PHP domain VIBNI_A2297 PF14579 Helix-hairpin-helix motif VIBNI_A2298 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) VIBNI_A2299 PF13609 Gram-negative porin VIBNI_A2300 PF06733 DEAD_2 VIBNI_A2300 PF13307 Helicase C-terminal domain VIBNI_A2301 PF01925 Sulfite exporter TauE/SafE VIBNI_A2302 PF07445 Primosomal replication protein priC VIBNI_A2303 PF10689 Protein of unknown function (DUF2496) VIBNI_A2310 PF00106 short chain dehydrogenase VIBNI_A2316 PF12697 Alpha/beta hydrolase family VIBNI_A2316 PF08241 Methyltransferase domain VIBNI_A2317 PF00155 Aminotransferase class I and II VIBNI_A2318 PF06968 Biotin and Thiamin Synthesis associated domain VIBNI_A2318 PF04055 Radical SAM superfamily VIBNI_A2319 PF00202 Aminotransferase class-III VIBNI_A2320 PF02403 Seryl-tRNA synthetase N-terminal domain VIBNI_A2320 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VIBNI_A2321 PF00004 ATPase family associated with various cellular activities (AAA) VIBNI_A2321 PF12002 MgsA AAA+ ATPase C terminal VIBNI_A2321 PF16193 AAA C-terminal domain VIBNI_A2322 PF03548 Outer membrane lipoprotein carrier protein LolA VIBNI_A2323 PF09397 Ftsk gamma domain VIBNI_A2323 PF01580 FtsK/SpoIIIE family VIBNI_A2323 PF13491 4TM region of DNA translocase FtsK/SpoIIIE VIBNI_A2323 PF17854 FtsK alpha domain VIBNI_A2324 PF01037 Lrp/AsnC ligand binding domain VIBNI_A2325 PF01262 Alanine dehydrogenase/PNT, C-terminal domain VIBNI_A2325 PF05222 Alanine dehydrogenase/PNT, N-terminal domain VIBNI_A2327 PF03466 LysR substrate binding domain VIBNI_A2327 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_A2329 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) VIBNI_A2330 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family VIBNI_A2331 PF18073 Rubredoxin metal binding domain VIBNI_A2332 PF06305 Lipopolysaccharide assembly protein A domain VIBNI_A2333 PF00216 Bacterial DNA-binding protein VIBNI_A2334 PF00575 S1 RNA binding domain VIBNI_A2335 PF02224 Cytidylate kinase VIBNI_A2336 PF08496 Peptidase family S49 N-terminal VIBNI_A2336 PF01343 Peptidase family S49 VIBNI_A2337 PF00106 short chain dehydrogenase VIBNI_A2338 PF01584 CheW-like domain VIBNI_A2338 PF00072 Response regulator receiver domain VIBNI_A2339 PF00480 ROK family VIBNI_A2340 PF00224 Pyruvate kinase, barrel domain VIBNI_A2340 PF02887 Pyruvate kinase, alpha/beta domain VIBNI_A2341 PF01734 Patatin-like phospholipase VIBNI_A2342 PF00209 Sodium:neurotransmitter symporter family VIBNI_A2343 PF13276 HTH-like domain VIBNI_A2343 PF13333 Integrase core domain VIBNI_A2343 PF00665 Integrase core domain VIBNI_A2346 PF01243 Pyridoxamine 5'-phosphate oxidase VIBNI_A2347 PF06228 Haem utilisation ChuX/HutX VIBNI_A2348 PF04055 Radical SAM superfamily VIBNI_A2350 PF01032 FecCD transport family VIBNI_A2351 PF00005 ABC transporter VIBNI_A2352 PF02378 Phosphotransferase system, EIIC VIBNI_A2352 PF00367 phosphotransferase system, EIIB VIBNI_A2354 PF01026 TatD related DNase VIBNI_A2355 PF09115 DNA polymerase III, delta subunit, C terminal VIBNI_A2356 PF02223 Thymidylate kinase VIBNI_A2357 PF02618 YceG-like family VIBNI_A2358 PF01063 Amino-transferase class IV VIBNI_A2359 PF02801 Beta-ketoacyl synthase, C-terminal domain VIBNI_A2359 PF00109 Beta-ketoacyl synthase, N-terminal domain VIBNI_A2360 PF00550 Phosphopantetheine attachment site VIBNI_A2362 PF00698 Acyl transferase domain VIBNI_A2363 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VIBNI_A2363 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VIBNI_A2365 PF01783 Ribosomal L32p protein family VIBNI_A2366 PF02620 Large ribosomal RNA subunit accumulation protein YceD VIBNI_A2368 PF02545 Maf-like protein VIBNI_A2369 PF01479 S4 domain VIBNI_A2369 PF00849 RNA pseudouridylate synthase VIBNI_A2371 PF10150 Ribonuclease E/G family VIBNI_A2371 PF00575 S1 RNA binding domain VIBNI_A2371 PF12111 Polyribonucleotide phosphorylase C terminal VIBNI_A2372 PF00916 Sulfate permease family VIBNI_A2372 PF01740 STAS domain VIBNI_A2373 PF06940 Domain of unknown function (DUF1287) VIBNI_A2374 PF01451 Low molecular weight phosphotyrosine protein phosphatase VIBNI_A2375 PF12557 Cob(I)alamin adenosyltransferase N terminal VIBNI_A2375 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP VIBNI_A2376 PF01156 Inosine-uridine preferring nucleoside hydrolase VIBNI_A2378 PF00485 Phosphoribulokinase / Uridine kinase family VIBNI_A2379 PF01418 Helix-turn-helix domain, rpiR family VIBNI_A2379 PF01380 SIS domain VIBNI_A2380 PF01925 Sulfite exporter TauE/SafE VIBNI_A2381 PF03610 PTS system fructose IIA component VIBNI_A2382 PF03613 PTS system mannose/fructose/sorbose family IID component VIBNI_A2383 PF03609 PTS system sorbose-specific iic component VIBNI_A2384 PF03830 PTS system sorbose subfamily IIB component VIBNI_A2385 PF13580 SIS domain VIBNI_A2386 PF02278 Polysaccharide lyase family 8, super-sandwich domain VIBNI_A2386 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain VIBNI_A2386 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain VIBNI_A2387 PF10609 NUBPL iron-transfer P-loop NTPase VIBNI_A2388 PF09334 tRNA synthetases class I (M) VIBNI_A2388 PF01588 Putative tRNA binding domain VIBNI_A2390 PF00392 Bacterial regulatory proteins, gntR family VIBNI_A2390 PF07840 FadR C-terminal domain VIBNI_A2392 PF06450 Bacterial Na+/H+ antiporter B (NhaB) VIBNI_A2393 PF02600 Disulfide bond formation protein DsbB VIBNI_A2394 PF07516 SecA Wing and Scaffold domain VIBNI_A2394 PF02810 SEC-C motif VIBNI_A2394 PF07517 SecA DEAD-like domain VIBNI_A2394 PF01043 SecA preprotein cross-linking domain VIBNI_A2395 PF01207 Dihydrouridine synthase (Dus) VIBNI_A2396 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_A2397 PF00005 ABC transporter VIBNI_A2398 PF02653 Branched-chain amino acid transport system / permease component VIBNI_A2400 PF04217 Protein of unknown function, DUF412 VIBNI_A2401 PF00871 Acetokinase family VIBNI_A2402 PF01515 Phosphate acetyl/butaryl transferase VIBNI_A2402 PF07085 DRTGG domain VIBNI_A2404 PF04011 LemA family VIBNI_A2409 PF07690 Major Facilitator Superfamily VIBNI_A2410 PF13193 AMP-binding enzyme C-terminal domain VIBNI_A2410 PF00501 AMP-binding enzyme VIBNI_A2411 PF13378 Enolase C-terminal domain-like VIBNI_A2412 PF00378 Enoyl-CoA hydratase/isomerase VIBNI_A2413 PF12697 Alpha/beta hydrolase family VIBNI_A2415 PF00425 chorismate binding enzyme VIBNI_A2416 PF00155 Aminotransferase class I and II VIBNI_A2418 PF01966 HD domain VIBNI_A2418 PF13286 Phosphohydrolase-associated domain VIBNI_A2423 PF13145 PPIC-type PPIASE domain VIBNI_A2425 PF00216 Bacterial DNA-binding protein VIBNI_A2426 PF02190 ATP-dependent protease La (LON) substrate-binding domain VIBNI_A2426 PF05362 Lon protease (S16) C-terminal proteolytic domain VIBNI_A2426 PF00004 ATPase family associated with various cellular activities (AAA) VIBNI_A2427 PF06689 ClpX C4-type zinc finger VIBNI_A2427 PF10431 C-terminal, D2-small domain, of ClpB protein VIBNI_A2427 PF07724 AAA domain (Cdc48 subfamily) VIBNI_A2428 PF00574 Clp protease VIBNI_A2430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_A2430 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_A2430 PF02743 Cache domain VIBNI_A2431 PF02954 Bacterial regulatory protein, Fis family VIBNI_A2431 PF00072 Response regulator receiver domain VIBNI_A2431 PF00158 Sigma-54 interaction domain VIBNI_A2433 PF03480 Bacterial extracellular solute-binding protein, family 7 VIBNI_A2434 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component VIBNI_A2435 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VIBNI_A2436 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VIBNI_A2437 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component VIBNI_A2438 PF03480 Bacterial extracellular solute-binding protein, family 7 VIBNI_A2441 PF00195 Chalcone and stilbene synthases, N-terminal domain VIBNI_A2441 PF02797 Chalcone and stilbene synthases, C-terminal domain VIBNI_A2444 PF00005 ABC transporter VIBNI_A2444 PF03459 TOBE domain VIBNI_A2444 PF17912 MalK OB fold domain VIBNI_A2445 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_A2447 PF01547 Bacterial extracellular solute-binding protein VIBNI_A2448 PF00672 HAMP domain VIBNI_A2448 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_A2448 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_A2449 PF00486 Transcriptional regulatory protein, C terminal VIBNI_A2449 PF00072 Response regulator receiver domain VIBNI_A2450 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_A2450 PF08448 PAS fold VIBNI_A2451 PF00672 HAMP domain VIBNI_A2451 PF12729 Four helix bundle sensory module for signal transduction VIBNI_A2451 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBNI_A2452 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_A2452 PF00672 HAMP domain VIBNI_A2452 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VIBNI_A2452 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_A2452 PF01627 Hpt domain VIBNI_A2452 PF00072 Response regulator receiver domain VIBNI_A2455 PF13406 Transglycosylase SLT domain VIBNI_A2456 PF05166 YcgL domain VIBNI_A2457 PF03775 Septum formation inhibitor MinC, C-terminal domain VIBNI_A2457 PF05209 Septum formation inhibitor MinC, N-terminal domain VIBNI_A2458 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain VIBNI_A2459 PF03776 Septum formation topological specificity factor MinE VIBNI_A2460 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_A2460 PF13426 PAS domain VIBNI_A2460 PF00563 EAL domain VIBNI_A2461 PF00672 HAMP domain VIBNI_A2461 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VIBNI_A2461 PF00072 Response regulator receiver domain VIBNI_A2461 PF01627 Hpt domain VIBNI_A2461 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_A2461 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_A2463 PF00860 Permease family VIBNI_A2464 PF00196 Bacterial regulatory proteins, luxR family VIBNI_A2464 PF00072 Response regulator receiver domain VIBNI_A2465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_A2465 PF07730 Histidine kinase VIBNI_A2466 PF03480 Bacterial extracellular solute-binding protein, family 7 VIBNI_A2468 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VIBNI_A2471 PF00551 Formyl transferase VIBNI_A2472 PF13230 Glutamine amidotransferases class-II VIBNI_A2473 PF13580 SIS domain VIBNI_A2474 PF09317 Domain of unknown function (DUF1974) VIBNI_A2474 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VIBNI_A2474 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VIBNI_A2475 PF17945 Beta/Gamma crystallin VIBNI_A2475 PF12561 ToxR activated gene A lipoprotein domain VIBNI_A2477 PF00929 Exonuclease VIBNI_A2478 PF00075 RNase H VIBNI_A2479 PF08241 Methyltransferase domain VIBNI_A2480 PF00753 Metallo-beta-lactamase superfamily VIBNI_A2480 PF16123 Hydroxyacylglutathione hydrolase C-terminus VIBNI_A2481 PF01464 Transglycosylase SLT domain VIBNI_A2481 PF01476 LysM domain VIBNI_A2484 PF00543 Nitrogen regulatory protein P-II VIBNI_A2486 PF00034 Cytochrome c VIBNI_A2487 PF11734 TilS substrate C-terminal domain VIBNI_A2487 PF01171 PP-loop family VIBNI_A2487 PF09179 TilS substrate binding domain VIBNI_A2488 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit VIBNI_A2489 PF07733 Bacterial DNA polymerase III alpha NTPase domain VIBNI_A2489 PF02811 PHP domain VIBNI_A2489 PF14579 Helix-hairpin-helix motif VIBNI_A2489 PF01336 OB-fold nucleic acid binding domain VIBNI_A2489 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VIBNI_A2491 PF02684 Lipid-A-disaccharide synthetase VIBNI_A2492 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 VIBNI_A2492 PF00132 Bacterial transferase hexapeptide (six repeats) VIBNI_A2493 PF07977 FabA-like domain VIBNI_A2494 PF00132 Bacterial transferase hexapeptide (six repeats) VIBNI_A2494 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD VIBNI_A2495 PF03938 Outer membrane protein (OmpH-like) VIBNI_A2496 PF07244 Surface antigen variable number repeat VIBNI_A2496 PF01103 Surface antigen VIBNI_A2497 PF02163 Peptidase family M50 VIBNI_A2497 PF17820 PDZ domain VIBNI_A2498 PF13288 DXP reductoisomerase C-terminal domain VIBNI_A2498 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase VIBNI_A2498 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain VIBNI_A2500 PF01255 Putative undecaprenyl diphosphate synthase VIBNI_A2501 PF01765 Ribosome recycling factor VIBNI_A2502 PF00696 Amino acid kinase family VIBNI_A2503 PF00889 Elongation factor TS VIBNI_A2504 PF00318 Ribosomal protein S2 VIBNI_A2505 PF00557 Metallopeptidase family M24 VIBNI_A2506 PF01842 ACT domain VIBNI_A2506 PF01966 HD domain VIBNI_A2506 PF08335 GlnD PII-uridylyltransferase VIBNI_A2506 PF01909 Nucleotidyltransferase domain VIBNI_A2507 PF11944 Protein of unknown function (DUF3461) VIBNI_A2508 PF00849 RNA pseudouridylate synthase VIBNI_A2509 PF04287 tRNA pseudouridine synthase C VIBNI_A2515 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 VIBNI_A2516 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) VIBNI_A2517 PF07348 Syd protein (SUKH-2) VIBNI_A2518 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term VIBNI_A2518 PF14489 QueF-like protein VIBNI_A2520 PF00072 Response regulator receiver domain VIBNI_A2520 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_A2521 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases VIBNI_A2521 PF11892 Domain of unknown function (DUF3412) VIBNI_A2521 PF03641 Possible lysine decarboxylase VIBNI_A2524 PF01223 DNA/RNA non-specific endonuclease VIBNI_A2525 PF01612 3'-5' exonuclease VIBNI_A2525 PF00570 HRDC domain VIBNI_A2526 PF13193 AMP-binding enzyme C-terminal domain VIBNI_A2526 PF00501 AMP-binding enzyme VIBNI_A2528 PF03843 Outer membrane lipoprotein Slp family VIBNI_A2530 PF00814 Glycoprotease family VIBNI_A2531 PF04851 Type III restriction enzyme, res subunit VIBNI_A2531 PF13307 Helicase C-terminal domain VIBNI_A2534 PF00551 Formyl transferase VIBNI_A2534 PF01842 ACT domain VIBNI_A2535 PF06185 YecM protein VIBNI_A2536 PF05746 DALR anticodon binding domain VIBNI_A2536 PF00750 tRNA synthetases class I (R) VIBNI_A2536 PF03485 Arginyl tRNA synthetase N terminal domain VIBNI_A2537 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VIBNI_A2539 PF05378 Hydantoinase/oxoprolinase N-terminal region VIBNI_A2539 PF01968 Hydantoinase/oxoprolinase VIBNI_A2540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VIBNI_A2540 PF00005 ABC transporter VIBNI_A2542 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_A2543 PF00196 Bacterial regulatory proteins, luxR family VIBNI_A2543 PF00072 Response regulator receiver domain VIBNI_A2544 PF03279 Bacterial lipid A biosynthesis acyltransferase VIBNI_A2547 PF07664 Ferrous iron transport protein B C terminus VIBNI_A2547 PF02421 Ferrous iron transport protein B VIBNI_A2547 PF07670 Nucleoside recognition VIBNI_A2549 PF12833 Helix-turn-helix domain VIBNI_A2550 PF08525 Opacity-associated protein A N-terminal motif VIBNI_A2550 PF01476 LysM domain VIBNI_A2550 PF01551 Peptidase family M23 VIBNI_A2551 PF01297 Zinc-uptake complex component A periplasmic VIBNI_A2552 PF00005 ABC transporter VIBNI_A2553 PF00950 ABC 3 transport family VIBNI_A2556 PF13193 AMP-binding enzyme C-terminal domain VIBNI_A2556 PF00501 AMP-binding enzyme VIBNI_A2556 PF00550 Phosphopantetheine attachment site VIBNI_A2556 PF00668 Condensation domain VIBNI_A2557 PF00282 Pyridoxal-dependent decarboxylase conserved domain VIBNI_A2558 PF00005 ABC transporter VIBNI_A2558 PF00664 ABC transporter transmembrane region VIBNI_A2559 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VIBNI_A2560 PF00549 CoA-ligase VIBNI_A2560 PF02629 CoA binding domain VIBNI_A2561 PF08442 ATP-grasp domain VIBNI_A2561 PF00549 CoA-ligase VIBNI_A2562 PF00364 Biotin-requiring enzyme VIBNI_A2562 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VIBNI_A2562 PF02817 e3 binding domain VIBNI_A2563 PF16078 2-oxoglutarate dehydrogenase N-terminus VIBNI_A2563 PF00676 Dehydrogenase E1 component VIBNI_A2563 PF16870 2-oxoglutarate dehydrogenase C-terminal VIBNI_A2563 PF02779 Transketolase, pyrimidine binding domain VIBNI_A2564 PF13085 2Fe-2S iron-sulfur cluster binding domain VIBNI_A2565 PF02910 Fumarate reductase flavoprotein C-term VIBNI_A2565 PF00890 FAD binding domain VIBNI_A2566 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit VIBNI_A2567 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit VIBNI_A2569 PF00285 Citrate synthase, C-terminal domain VIBNI_A2570 PF01784 NIF3 (NGG1p interacting factor 3) VIBNI_A2572 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VIBNI_A2572 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VIBNI_A2572 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VIBNI_A2572 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VIBNI_A2573 PF17206 SeqA protein N-terminal domain VIBNI_A2573 PF03925 SeqA protein C-terminal domain VIBNI_A2574 PF00561 alpha/beta hydrolase fold VIBNI_A2576 PF00258 Flavodoxin VIBNI_A2578 PF01475 Ferric uptake regulator family VIBNI_A2579 PF00749 tRNA synthetases class I (E and Q), catalytic domain VIBNI_A2579 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain VIBNI_A2580 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VIBNI_A2580 PF02378 Phosphotransferase system, EIIC VIBNI_A2580 PF00367 phosphotransferase system, EIIB VIBNI_A2581 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase VIBNI_A2582 PF01979 Amidohydrolase family VIBNI_A2583 PF00480 ROK family VIBNI_A2583 PF01047 MarR family VIBNI_A2584 PF00999 Sodium/hydrogen exchanger family VIBNI_A2584 PF02254 TrkA-N domain VIBNI_A2587 PF00294 pfkB family carbohydrate kinase VIBNI_A2588 PF02653 Branched-chain amino acid transport system / permease component VIBNI_A2589 PF02653 Branched-chain amino acid transport system / permease component VIBNI_A2590 PF00005 ABC transporter VIBNI_A2592 PF00596 Class II Aldolase and Adducin N-terminal domain VIBNI_A2595 PF13537 Glutamine amidotransferase domain VIBNI_A2595 PF00733 Asparagine synthase VIBNI_A2596 PF02357 Transcription termination factor nusG VIBNI_A2597 PF00854 POT family VIBNI_A2598 PF00762 Ferrochelatase VIBNI_A2600 PF05191 Adenylate kinase, active site lid VIBNI_A2601 PF00183 Hsp90 protein VIBNI_A2601 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_A2602 PF00486 Transcriptional regulatory protein, C terminal VIBNI_A2603 PF17323 Trans-membrane regulatory protein ToxS VIBNI_A2606 PF12850 Calcineurin-like phosphoesterase superfamily domain VIBNI_A2609 PF07556 Protein of unknown function (DUF1538) VIBNI_A2610 PF07556 Protein of unknown function (DUF1538) VIBNI_A2611 PF08338 Domain of unknown function (DUF1731) VIBNI_A2611 PF01370 NAD dependent epimerase/dehydratase family VIBNI_A2612 PF00106 short chain dehydrogenase VIBNI_A2613 PF00085 Thioredoxin VIBNI_A2614 PF01145 SPFH domain / Band 7 family VIBNI_A2614 PF16200 C-terminal region of band_7 VIBNI_A2616 PF13411 MerR HTH family regulatory protein VIBNI_A2618 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) VIBNI_A2619 PF13609 Gram-negative porin VIBNI_A2623 PF04354 ZipA, C-terminal FtsZ-binding domain VIBNI_A2625 PF00291 Pyridoxal-phosphate dependent enzyme VIBNI_A2627 PF00381 PTS HPr component phosphorylation site VIBNI_A2628 PF02896 PEP-utilising enzyme, TIM barrel domain VIBNI_A2628 PF05524 PEP-utilising enzyme, N-terminal VIBNI_A2628 PF00391 PEP-utilising enzyme, mobile domain VIBNI_A2629 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VIBNI_A2630 PF07196 Flagellin hook IN motif VIBNI_A2630 PF00669 Bacterial flagellin N-terminal helical region VIBNI_A2630 PF00700 Bacterial flagellin C-terminal helical region VIBNI_A2631 PF00669 Bacterial flagellin N-terminal helical region VIBNI_A2632 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VIBNI_A2632 PF07196 Flagellin hook IN motif VIBNI_A2633 PF10135 Rod binding protein VIBNI_A2633 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase VIBNI_A2635 PF02107 Flagellar L-ring protein VIBNI_A2636 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VIBNI_A2636 PF00460 Flagella basal body rod protein VIBNI_A2637 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VIBNI_A2637 PF00460 Flagella basal body rod protein VIBNI_A2638 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VIBNI_A2638 PF00460 Flagella basal body rod protein VIBNI_A2638 PF07559 Flagellar basal body protein FlaE VIBNI_A2639 PF03963 Flagellar hook capping protein - N-terminal region VIBNI_A2639 PF13860 FlgD Ig-like domain VIBNI_A2639 PF13861 FlgD Tudor-like domain VIBNI_A2640 PF00460 Flagella basal body rod protein VIBNI_A2640 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VIBNI_A2641 PF00460 Flagella basal body rod protein VIBNI_A2643 PF03705 CheR methyltransferase, all-alpha domain VIBNI_A2643 PF01739 CheR methyltransferase, SAM binding domain VIBNI_A2644 PF01584 CheW-like domain VIBNI_A2644 PF00072 Response regulator receiver domain VIBNI_A2645 PF13144 Chaperone for flagella basal body P-ring formation VIBNI_A2653 PF00127 Copper binding proteins, plastocyanin/azurin family VIBNI_A2655 PF00749 tRNA synthetases class I (E and Q), catalytic domain VIBNI_A2657 PF00403 Heavy-metal-associated domain VIBNI_A2663 PF00849 RNA pseudouridylate synthase VIBNI_A2663 PF01479 S4 domain VIBNI_A2664 PF01713 Smr domain VIBNI_A2668 PF04073 Aminoacyl-tRNA editing domain VIBNI_A2671 PF00672 HAMP domain VIBNI_A2671 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBNI_A2671 PF02743 Cache domain VIBNI_A2672 PF00873 AcrB/AcrD/AcrF family VIBNI_A2673 PF13533 Biotin-lipoyl like VIBNI_A2674 PF00486 Transcriptional regulatory protein, C terminal VIBNI_A2674 PF00072 Response regulator receiver domain VIBNI_A2675 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_A2675 PF08521 Two-component sensor kinase N-terminal VIBNI_A2675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_A2676 PF00793 DAHP synthetase I family VIBNI_A2677 PF13369 Transglutaminase-like superfamily VIBNI_A2678 PF04247 Invasion gene expression up-regulator, SirB VIBNI_A2679 PF17827 PrmC N-terminal domain VIBNI_A2679 PF13847 Methyltransferase domain VIBNI_A2680 PF00472 RF-1 domain VIBNI_A2680 PF03462 PCRF domain VIBNI_A2681 PF01488 Shikimate / quinate 5-dehydrogenase VIBNI_A2681 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain VIBNI_A2681 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain VIBNI_A2683 PF08544 GHMP kinases C terminal VIBNI_A2683 PF00288 GHMP kinases N terminal domain VIBNI_A2684 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase VIBNI_A2684 PF14572 Phosphoribosyl synthetase-associated domain VIBNI_A2686 PF01926 50S ribosome-binding GTPase VIBNI_A2686 PF06071 Protein of unknown function (DUF933) VIBNI_A2690 PF10282 Lactonase, 7-bladed beta-propeller VIBNI_A2691 PF01494 FAD binding domain VIBNI_A2694 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_A2695 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_A2696 PF00378 Enoyl-CoA hydratase/isomerase VIBNI_A2699 PF03459 TOBE domain VIBNI_A2699 PF17912 MalK OB fold domain VIBNI_A2699 PF00005 ABC transporter VIBNI_A2701 PF02515 CoA-transferase family III VIBNI_A2702 PF00919 Uncharacterized protein family UPF0004 VIBNI_A2702 PF01938 TRAM domain VIBNI_A2702 PF04055 Radical SAM superfamily VIBNI_A2703 PF02562 PhoH-like protein VIBNI_A2705 PF03471 Transporter associated domain VIBNI_A2705 PF00571 CBS domain VIBNI_A2706 PF00795 Carbon-nitrogen hydrolase VIBNI_A2707 PF07295 Zinc-ribbon containing domain VIBNI_A2709 PF04390 Lipopolysaccharide-assembly VIBNI_A2710 PF14840 Processivity clamp loader gamma complex DNA pol III C-term VIBNI_A2710 PF06144 DNA polymerase III, delta subunit VIBNI_A2713 PF02590 Predicted SPOUT methyltransferase VIBNI_A2714 PF03717 Penicillin-binding Protein dimerisation domain VIBNI_A2714 PF00905 Penicillin binding protein transpeptidase domain VIBNI_A2715 PF01098 Cell cycle protein VIBNI_A2716 PF03330 Lytic transglycolase VIBNI_A2716 PF05036 Sporulation related domain VIBNI_A2717 PF00768 D-alanyl-D-alanine carboxypeptidase VIBNI_A2717 PF07943 Penicillin-binding protein 5, C-terminal domain VIBNI_A2718 PF04359 Protein of unknown function (DUF493) VIBNI_A2719 PF03099 Biotin/lipoate A/B protein ligase family VIBNI_A2720 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family VIBNI_A2720 PF04055 Radical SAM superfamily VIBNI_A2722 PF00226 DnaJ domain VIBNI_A2722 PF01556 DnaJ C terminal domain VIBNI_A2722 PF00684 DnaJ central domain VIBNI_A2723 PF00012 Hsp70 protein VIBNI_A2724 PF00375 Sodium:dicarboxylate symporter family VIBNI_A2725 PF00464 Serine hydroxymethyltransferase VIBNI_A2727 PF00128 Alpha amylase, catalytic domain VIBNI_A2727 PF16657 Maltogenic Amylase, C-terminal domain VIBNI_A2728 PF02378 Phosphotransferase system, EIIC VIBNI_A2728 PF00367 phosphotransferase system, EIIB VIBNI_A2729 PF00356 Bacterial regulatory proteins, lacI family VIBNI_A2732 PF00005 ABC transporter VIBNI_A2732 PF09383 NIL domain VIBNI_A2733 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_A2734 PF03180 NLPA lipoprotein VIBNI_A2736 PF01380 SIS domain VIBNI_A2736 PF01418 Helix-turn-helix domain, rpiR family VIBNI_A2737 PF00701 Dihydrodipicolinate synthetase family VIBNI_A2738 PF00701 Dihydrodipicolinate synthetase family VIBNI_A2739 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VIBNI_A2740 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component VIBNI_A2741 PF03480 Bacterial extracellular solute-binding protein, family 7 VIBNI_A2742 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase VIBNI_A2743 PF00480 ROK family VIBNI_A2744 PF01979 Amidohydrolase family VIBNI_A2747 PF04166 Pyridoxal phosphate biosynthetic protein PdxA VIBNI_A2748 PF13378 Enolase C-terminal domain-like VIBNI_A2748 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain VIBNI_A2750 PF00171 Aldehyde dehydrogenase family VIBNI_A2751 PF07702 UTRA domain VIBNI_A2751 PF00392 Bacterial regulatory proteins, gntR family VIBNI_A2752 PF03480 Bacterial extracellular solute-binding protein, family 7 VIBNI_A2755 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VIBNI_A2756 PF07729 FCD domain VIBNI_A2756 PF00392 Bacterial regulatory proteins, gntR family VIBNI_A2757 PF00072 Response regulator receiver domain VIBNI_A2757 PF01627 Hpt domain VIBNI_A2757 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_A2757 PF00672 HAMP domain VIBNI_A2757 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_A2757 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VIBNI_A2758 PF00072 Response regulator receiver domain VIBNI_A2758 PF00486 Transcriptional regulatory protein, C terminal VIBNI_A2760 PF03707 Bacterial signalling protein N terminal repeat VIBNI_A2760 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_A2760 PF00563 EAL domain VIBNI_A2761 PF13673 Acetyltransferase (GNAT) domain VIBNI_A2762 PF07885 Ion channel VIBNI_A2763 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_A2763 PF03466 LysR substrate binding domain VIBNI_A2765 PF01235 Sodium:alanine symporter family VIBNI_A2767 PF02540 NAD synthase VIBNI_A2767 PF00958 GMP synthase C terminal domain VIBNI_A2767 PF00117 Glutamine amidotransferase class-I VIBNI_A2768 PF00571 CBS domain VIBNI_A2768 PF00478 IMP dehydrogenase / GMP reductase domain VIBNI_A2769 PF13742 OB-fold nucleic acid binding domain VIBNI_A2769 PF02601 Exonuclease VII, large subunit VIBNI_A2771 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal VIBNI_A2771 PF01926 50S ribosome-binding GTPase VIBNI_A2772 PF13360 PQQ-like domain VIBNI_A2773 PF09976 Tetratricopeptide repeat-like domain VIBNI_A2774 PF03129 Anticodon binding domain VIBNI_A2774 PF13393 Histidyl-tRNA synthetase VIBNI_A2775 PF04551 GcpE protein VIBNI_A2776 PF13464 Domain of unknown function (DUF4115) VIBNI_A2778 PF04055 Radical SAM superfamily VIBNI_A2779 PF00334 Nucleoside diphosphate kinase VIBNI_A2780 PF12404 Peptidase VIBNI_A2780 PF00883 Cytosol aminopeptidase family, catalytic domain VIBNI_A2781 PF04384 Iron-sulphur cluster assembly VIBNI_A2782 PF00111 2Fe-2S iron-sulfur cluster binding domain VIBNI_A2783 PF00012 Hsp70 protein VIBNI_A2784 PF00226 DnaJ domain VIBNI_A2784 PF07743 HSCB C-terminal oligomerisation domain VIBNI_A2785 PF01521 Iron-sulphur cluster biosynthesis VIBNI_A2786 PF01592 NifU-like N terminal domain VIBNI_A2787 PF00266 Aminotransferase class-V VIBNI_A2788 PF02082 Transcriptional regulator VIBNI_A2789 PF00588 SpoU rRNA Methylase family VIBNI_A2790 PF00459 Inositol monophosphatase family VIBNI_A2791 PF13181 Tetratricopeptide repeat VIBNI_A2791 PF07719 Tetratricopeptide repeat VIBNI_A2796 PF02033 Ribosome-binding factor A VIBNI_A2797 PF08364 Bacterial translation initiation factor IF-2 associated region VIBNI_A2797 PF11987 Translation-initiation factor 2 VIBNI_A2797 PF00009 Elongation factor Tu GTP binding domain VIBNI_A2797 PF04760 Translation initiation factor IF-2, N-terminal region VIBNI_A2798 PF13184 NusA-like KH domain VIBNI_A2798 PF08529 NusA N-terminal domain VIBNI_A2798 PF00575 S1 RNA binding domain VIBNI_A2799 PF17384 RimP C-terminal SH3 domain VIBNI_A2799 PF02576 RimP N-terminal domain VIBNI_A2800 PF03840 Preprotein translocase SecG subunit VIBNI_A2801 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VIBNI_A2801 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VIBNI_A2801 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VIBNI_A2801 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VIBNI_A2802 PF00809 Pterin binding enzyme VIBNI_A2803 PF06480 FtsH Extracellular VIBNI_A2803 PF17862 AAA+ lid domain VIBNI_A2803 PF00004 ATPase family associated with various cellular activities (AAA) VIBNI_A2803 PF01434 Peptidase family M41 VIBNI_A2804 PF01728 FtsJ-like methyltransferase VIBNI_A2806 PF01985 CRS1 / YhbY (CRM) domain VIBNI_A2807 PF01272 Transcription elongation factor, GreA/GreB, C-term VIBNI_A2807 PF03449 Transcription elongation factor, N-terminal VIBNI_A2808 PF13609 Gram-negative porin VIBNI_A2809 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family VIBNI_A2812 PF00579 tRNA synthetases class I (W and Y) VIBNI_A2813 PF01551 Peptidase family M23 VIBNI_A2813 PF08525 Opacity-associated protein A N-terminal motif VIBNI_A2813 PF01476 LysM domain VIBNI_A2814 PF00873 AcrB/AcrD/AcrF family VIBNI_A2816 PF01521 Iron-sulphur cluster biosynthesis VIBNI_A2817 PF00202 Aminotransferase class-III VIBNI_A2818 PF01594 AI-2E family transporter VIBNI_A2819 PF05175 Methyltransferase small domain VIBNI_A2819 PF08468 Methyltransferase small domain N-terminal VIBNI_A2820 PF00072 Response regulator receiver domain VIBNI_A2820 PF09308 LuxQ, periplasmic VIBNI_A2820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_A2820 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_A2822 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VIBNI_A2823 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_A2824 PF12911 N-terminal TM domain of oligopeptide transport permease C VIBNI_A2824 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_A2825 PF00005 ABC transporter VIBNI_A2825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VIBNI_A2826 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VIBNI_A2826 PF00005 ABC transporter VIBNI_A2828 PF01869 BadF/BadG/BcrA/BcrD ATPase family VIBNI_A2829 PF02838 Glycosyl hydrolase family 20, domain 2 VIBNI_A2829 PF00728 Glycosyl hydrolase family 20, catalytic domain VIBNI_A2830 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain VIBNI_A2830 PF06165 Glycosyltransferase family 36 VIBNI_A2831 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VIBNI_A2831 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VIBNI_A2831 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VIBNI_A2831 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VIBNI_A2832 PF08402 TOBE domain VIBNI_A2832 PF00005 ABC transporter VIBNI_A2834 PF13416 Bacterial extracellular solute-binding protein VIBNI_A2836 PF00909 Ammonium Transporter Family VIBNI_A2837 PF00543 Nitrogen regulatory protein P-II VIBNI_A2838 PF06062 Uncharacterised protein family (UPF0231) VIBNI_A2842 PF11791 Aconitate B N-terminal domain VIBNI_A2842 PF06434 Aconitate hydratase 2 N-terminus VIBNI_A2842 PF00330 Aconitase family (aconitate hydratase) VIBNI_A2843 PF01734 Patatin-like phospholipase VIBNI_A2844 PF14814 Bifunctional transglycosylase second domain VIBNI_A2844 PF00905 Penicillin binding protein transpeptidase domain VIBNI_A2844 PF00912 Transglycosylase VIBNI_A2845 PF00270 DEAD/DEAH box helicase VIBNI_A2845 PF00271 Helicase conserved C-terminal domain VIBNI_A2845 PF08482 ATP-dependent helicase C-terminal VIBNI_A2845 PF04408 Helicase associated domain (HA2) VIBNI_A2846 PF03749 Sugar fermentation stimulation protein RE domain VIBNI_A2846 PF17746 SfsA N-terminal OB domain VIBNI_A2847 PF01258 Prokaryotic dksA/traR C4-type zinc finger VIBNI_A2848 PF00749 tRNA synthetases class I (E and Q), catalytic domain VIBNI_A2849 PF12627 Probable RNA and SrmB- binding site of polymerase A VIBNI_A2849 PF12626 Polymerase A arginine-rich C-terminus VIBNI_A2849 PF01743 Poly A polymerase head domain VIBNI_A2850 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) VIBNI_A2852 PF02569 Pantoate-beta-alanine ligase VIBNI_A2853 PF01061 ABC-2 type transporter VIBNI_A2854 PF00005 ABC transporter VIBNI_A2855 PF00916 Sulfate permease family VIBNI_A2855 PF01740 STAS domain VIBNI_A2857 PF00484 Carbonic anhydrase VIBNI_A2859 PF01926 50S ribosome-binding GTPase VIBNI_A2859 PF09269 Domain of unknown function (DUF1967) VIBNI_A2859 PF01018 GTP1/OBG VIBNI_A2861 PF02673 Bacitracin resistance protein BacA VIBNI_A2862 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) VIBNI_A2863 PF02152 Dihydroneopterin aldolase VIBNI_A2865 PF00364 Biotin-requiring enzyme VIBNI_A2865 PF00561 alpha/beta hydrolase fold VIBNI_A2867 PF01165 Ribosomal protein S21 VIBNI_A2868 PF09424 Yqey-like protein VIBNI_A2869 PF08278 DNA primase DnaG DnaB-binding VIBNI_A2869 PF08275 DNA primase catalytic core, N-terminal domain VIBNI_A2869 PF10410 DnaB-helicase binding domain of primase VIBNI_A2869 PF01807 CHC2 zinc finger VIBNI_A2870 PF04542 Sigma-70 region 2 VIBNI_A2870 PF00140 Sigma-70 factor, region 1.2 VIBNI_A2870 PF03979 Sigma-70 factor, region 1.1 VIBNI_A2870 PF04546 Sigma-70, non-essential region VIBNI_A2870 PF04539 Sigma-70 region 3 VIBNI_A2870 PF04545 Sigma-70, region 4 VIBNI_A2877 PF00282 Pyridoxal-dependent decarboxylase conserved domain VIBNI_A2879 PF03480 Bacterial extracellular solute-binding protein, family 7 VIBNI_A2880 PF00296 Luciferase-like monooxygenase VIBNI_A2882 PF01380 SIS domain VIBNI_A2883 PF08220 DeoR-like helix-turn-helix domain VIBNI_A2883 PF00455 DeoR C terminal sensor domain VIBNI_A2884 PF02887 Pyruvate kinase, alpha/beta domain VIBNI_A2884 PF00224 Pyruvate kinase, barrel domain VIBNI_A2887 PF05231 MASE1 VIBNI_A2887 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_A2887 PF08447 PAS fold VIBNI_A2887 PF00563 EAL domain VIBNI_A2887 PF13426 PAS domain VIBNI_A2887 PF08448 PAS fold VIBNI_A2888 PF10369 Small subunit of acetolactate synthase VIBNI_A2889 PF00205 Thiamine pyrophosphate enzyme, central domain VIBNI_A2889 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VIBNI_A2889 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VIBNI_A2891 PF00501 AMP-binding enzyme VIBNI_A2893 PF03466 LysR substrate binding domain VIBNI_A2893 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_A2896 PF01569 PAP2 superfamily VIBNI_A2899 PF08918 PhoQ Sensor VIBNI_A2899 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_A2900 PF00486 Transcriptional regulatory protein, C terminal VIBNI_A2900 PF00072 Response regulator receiver domain VIBNI_A2903 PF00005 ABC transporter VIBNI_A2903 PF00664 ABC transporter transmembrane region VIBNI_A2905 PF00873 AcrB/AcrD/AcrF family VIBNI_A2907 PF00440 Bacterial regulatory proteins, tetR family VIBNI_A2907 PF13977 BetI-type transcriptional repressor, C-terminal VIBNI_A2908 PF00682 HMGL-like VIBNI_A2908 PF08502 LeuA allosteric (dimerisation) domain VIBNI_A2909 PF00180 Isocitrate/isopropylmalate dehydrogenase VIBNI_A2910 PF00330 Aconitase family (aconitate hydratase) VIBNI_A2911 PF00694 Aconitase C-terminal domain VIBNI_A2914 PF05099 Tellurite resistance protein TerB VIBNI_A2914 PF00226 DnaJ domain VIBNI_A2915 PF03968 OstA-like protein VIBNI_A2915 PF04453 LPS transport system D VIBNI_A2916 PF00639 PPIC-type PPIASE domain VIBNI_A2916 PF09312 SurA N-terminal domain VIBNI_A2917 PF04166 Pyridoxal phosphate biosynthetic protein PdxA VIBNI_A2918 PF00398 Ribosomal RNA adenine dimethylase VIBNI_A2920 PF00149 Calcineurin-like phosphoesterase VIBNI_A2921 PF00186 Dihydrofolate reductase VIBNI_A2922 PF12821 Threonine/Serine exporter, ThrE VIBNI_A2923 PF06738 Putative threonine/serine exporter VIBNI_A2924 PF01926 50S ribosome-binding GTPase VIBNI_A2924 PF01018 GTP1/OBG VIBNI_A2925 PF01016 Ribosomal L27 protein VIBNI_A2927 PF00348 Polyprenyl synthetase VIBNI_A2929 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain VIBNI_A2929 PF00056 lactate/malate dehydrogenase, NAD binding domain VIBNI_A2932 PF16868 NMT1-like family VIBNI_A2935 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VIBNI_A2935 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VIBNI_A2936 PF00849 RNA pseudouridylate synthase VIBNI_A2937 PF12137 RNA polymerase recycling family C-terminal VIBNI_A2937 PF18339 RapA N-terminal Tudor like domain 1 VIBNI_A2937 PF18337 RapA N-terminal Tudor like domain VIBNI_A2937 PF00176 SNF2 family N-terminal domain VIBNI_A2937 PF00271 Helicase conserved C-terminal domain VIBNI_A2938 PF13638 PIN domain VIBNI_A2938 PF02562 PhoH-like protein VIBNI_A2941 PF00072 Response regulator receiver domain VIBNI_A2941 PF00486 Transcriptional regulatory protein, C terminal VIBNI_A2942 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_A2942 PF00989 PAS fold VIBNI_A2942 PF11808 Phosphate regulon sensor protein PhoR VIBNI_A2942 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_A2943 PF00378 Enoyl-CoA hydratase/isomerase VIBNI_A2945 PF00550 Phosphopantetheine attachment site VIBNI_A2945 PF00501 AMP-binding enzyme VIBNI_A2945 PF13193 AMP-binding enzyme C-terminal domain VIBNI_A2946 PF03448 MgtE intracellular N domain VIBNI_A2946 PF00571 CBS domain VIBNI_A2946 PF01769 Divalent cation transporter VIBNI_A2947 PF00381 PTS HPr component phosphorylation site VIBNI_A2948 PF03668 P-loop ATPase protein family VIBNI_A2949 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VIBNI_A2950 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein VIBNI_A2951 PF04552 Sigma-54, DNA binding domain VIBNI_A2951 PF04963 Sigma-54 factor, core binding domain VIBNI_A2951 PF00309 Sigma-54 factor, Activator interacting domain (AID) VIBNI_A2952 PF12399 Branched-chain amino acid ATP-binding cassette transporter VIBNI_A2952 PF00005 ABC transporter VIBNI_A2956 PF00571 CBS domain VIBNI_A2956 PF01380 SIS domain VIBNI_A2957 PF01699 Sodium/calcium exchanger protein VIBNI_A2958 PF00005 ABC transporter VIBNI_A2959 PF02405 Permease MlaE VIBNI_A2960 PF02470 MlaD protein VIBNI_A2961 PF05494 MlaC protein VIBNI_A2963 PF01722 BolA-like protein VIBNI_A2964 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VIBNI_A2965 PF01553 Acyltransferase VIBNI_A2966 PF10458 Valyl tRNA synthetase tRNA binding arm VIBNI_A2966 PF00133 tRNA synthetases class I (I, L, M and V) VIBNI_A2966 PF08264 Anticodon-binding domain of tRNA VIBNI_A2967 PF04364 DNA polymerase III chi subunit, HolC VIBNI_A2968 PF00883 Cytosol aminopeptidase family, catalytic domain VIBNI_A2968 PF02789 Cytosol aminopeptidase family, N-terminal domain VIBNI_A2969 PF03739 Lipopolysaccharide export system permease LptF/LptG VIBNI_A2970 PF03739 Lipopolysaccharide export system permease LptF/LptG VIBNI_A2976 PF00145 C-5 cytosine-specific DNA methylase VIBNI_A2977 PF01523 Putative modulator of DNA gyrase VIBNI_A2978 PF04751 Protein of unknown function (DUF615) VIBNI_A2979 PF01523 Putative modulator of DNA gyrase VIBNI_A2980 PF00795 Carbon-nitrogen hydrolase VIBNI_A2981 PF13116 Protein of unknown function VIBNI_A2981 PF13502 AsmA-like C-terminal region VIBNI_A2982 PF10150 Ribonuclease E/G family VIBNI_A2982 PF00575 S1 RNA binding domain VIBNI_A2983 PF02545 Maf-like protein VIBNI_A2984 PF04093 rod shape-determining protein MreD VIBNI_A2985 PF04085 rod shape-determining protein MreC VIBNI_A2994 PF07963 Prokaryotic N-terminal methylation motif VIBNI_A2994 PF00114 Pilin (bacterial filament) VIBNI_A2995 PF07963 Prokaryotic N-terminal methylation motif VIBNI_A2995 PF00114 Pilin (bacterial filament) VIBNI_A2997 PF00482 Type II secretion system (T2SS), protein F VIBNI_A2998 PF00437 Type II/IV secretion system protein VIBNI_A3000 PF13401 AAA domain VIBNI_A3000 PF01471 Putative peptidoglycan binding domain VIBNI_A3001 PF07660 Secretin and TonB N terminus short domain VIBNI_A3001 PF03958 Bacterial type II/III secretion system short domain VIBNI_A3001 PF00263 Bacterial type II and III secretion system protein VIBNI_A3001 PF11741 AMIN domain VIBNI_A3005 PF17157 Gammaproteobacterial periplasmic sensor domain VIBNI_A3005 PF00563 EAL domain VIBNI_A3005 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_A3028 PF00436 Single-strand binding protein family VIBNI_A3030 PF00196 Bacterial regulatory proteins, luxR family VIBNI_A3031 PF00483 Nucleotidyl transferase VIBNI_A3032 PF00005 ABC transporter VIBNI_A3032 PF17755 UvrA DNA-binding domain VIBNI_A3032 PF17760 UvrA interaction domain VIBNI_A3034 PF00266 Aminotransferase class-V VIBNI_A3035 PF00696 Amino acid kinase family VIBNI_A3035 PF01842 ACT domain VIBNI_A3036 PF02310 B12 binding domain VIBNI_A3036 PF02607 B12 binding domain VIBNI_A3036 PF02965 Vitamin B12 dependent methionine synthase, activation domain VIBNI_A3036 PF02574 Homocysteine S-methyltransferase VIBNI_A3036 PF00809 Pterin binding enzyme VIBNI_A3038 PF00999 Sodium/hydrogen exchanger family VIBNI_A3045 PF01966 HD domain VIBNI_A3048 PF00356 Bacterial regulatory proteins, lacI family VIBNI_A3049 PF04794 YdjC-like protein VIBNI_A3050 PF02056 Family 4 glycosyl hydrolase VIBNI_A3050 PF11975 Family 4 glycosyl hydrolase C-terminal domain VIBNI_A3051 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit VIBNI_A3052 PF02378 Phosphotransferase system, EIIC VIBNI_A3053 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VIBNI_A3055 PF00005 ABC transporter VIBNI_A3058 PF02441 Flavoprotein VIBNI_A3059 PF01225 Mur ligase family, catalytic domain VIBNI_A3059 PF02875 Mur ligase family, glutamate ligase domain VIBNI_A3059 PF08245 Mur ligase middle domain VIBNI_A3061 PF00719 Inorganic pyrophosphatase VIBNI_A3062 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like VIBNI_A3063 PF04357 TamB, inner membrane protein subunit of TAM complex VIBNI_A3064 PF01103 Surface antigen VIBNI_A3064 PF07244 Surface antigen variable number repeat VIBNI_A3064 PF17243 POTRA domain TamA domain 1 VIBNI_A3077 PF02931 Neurotransmitter-gated ion-channel ligand binding domain VIBNI_A3080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VIBNI_A3081 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_A3081 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_A3081 PF00497 Bacterial extracellular solute-binding proteins, family 3 VIBNI_A3091 PF01497 Periplasmic binding protein VIBNI_A3109 PF01590 GAF domain VIBNI_A3109 PF02954 Bacterial regulatory protein, Fis family VIBNI_A3109 PF00158 Sigma-54 interaction domain VIBNI_A3110 PF01625 Peptide methionine sulfoxide reductase VIBNI_A3111 PF06526 Protein of unknown function (DUF1107) VIBNI_A3112 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) VIBNI_A3114 PF07969 Amidohydrolase family VIBNI_A3116 PF01042 Endoribonuclease L-PSP VIBNI_A3117 PF01435 Peptidase family M48 VIBNI_A3118 PF05987 Bacterial protein of unknown function (DUF898) VIBNI_A3119 PF00583 Acetyltransferase (GNAT) family VIBNI_A3121 PF06877 Regulator of ribonuclease activity B VIBNI_A3124 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VIBNI_A3124 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VIBNI_A3125 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VIBNI_A3125 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VIBNI_A3126 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain VIBNI_A3126 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain VIBNI_A3129 PF00005 ABC transporter VIBNI_A3134 PF02080 TrkA-C domain VIBNI_A3134 PF03600 Citrate transporter VIBNI_A3135 PF00009 Elongation factor Tu GTP binding domain VIBNI_A3136 PF01507 Phosphoadenosine phosphosulfate reductase family VIBNI_A3137 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VIBNI_A3137 PF10414 Sirohaem synthase dimerisation region VIBNI_A3137 PF14824 Sirohaem biosynthesis protein central VIBNI_A3138 PF02872 5'-nucleotidase, C-terminal domain VIBNI_A3138 PF00149 Calcineurin-like phosphoesterase VIBNI_A3140 PF13673 Acetyltransferase (GNAT) domain VIBNI_A3141 PF00892 EamA-like transporter family VIBNI_A3149 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VIBNI_A3149 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VIBNI_A3151 PF01053 Cys/Met metabolism PLP-dependent enzyme VIBNI_A3152 PF01196 Ribosomal protein L17 VIBNI_A3154 PF00163 Ribosomal protein S4/S9 N-terminal domain VIBNI_A3154 PF01479 S4 domain VIBNI_A3155 PF00411 Ribosomal protein S11 VIBNI_A3156 PF00416 Ribosomal protein S13/S18 VIBNI_A3157 PF00444 Ribosomal protein L36 VIBNI_A3158 PF00344 SecY translocase VIBNI_A3160 PF00327 Ribosomal protein L30p/L7e VIBNI_A3161 PF03719 Ribosomal protein S5, C-terminal domain VIBNI_A3161 PF00333 Ribosomal protein S5, N-terminal domain VIBNI_A3162 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast VIBNI_A3163 PF00347 Ribosomal protein L6 VIBNI_A3164 PF00410 Ribosomal protein S8 VIBNI_A3165 PF00253 Ribosomal protein S14p/S29e VIBNI_A3167 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 VIBNI_A3167 PF00467 KOW motif VIBNI_A3168 PF00238 Ribosomal protein L14p/L23e VIBNI_A3169 PF00366 Ribosomal protein S17 VIBNI_A3170 PF00831 Ribosomal L29 protein VIBNI_A3171 PF00252 Ribosomal protein L16p/L10e VIBNI_A3172 PF00189 Ribosomal protein S3, C-terminal domain VIBNI_A3172 PF07650 KH domain VIBNI_A3173 PF00237 Ribosomal protein L22p/L17e VIBNI_A3174 PF00203 Ribosomal protein S19 VIBNI_A3176 PF00276 Ribosomal protein L23 VIBNI_A3177 PF00573 Ribosomal protein L4/L1 family VIBNI_A3179 PF00338 Ribosomal protein S10p/S20e VIBNI_A3180 PF00210 Ferritin-like domain VIBNI_A3181 PF04324 BFD-like [2Fe-2S] binding domain VIBNI_A3182 PF00009 Elongation factor Tu GTP binding domain VIBNI_A3182 PF03143 Elongation factor Tu C-terminal domain VIBNI_A3182 PF03144 Elongation factor Tu domain 2 VIBNI_A3183 PF00679 Elongation factor G C-terminus VIBNI_A3183 PF14492 Elongation Factor G, domain II VIBNI_A3183 PF00009 Elongation factor Tu GTP binding domain VIBNI_A3183 PF03144 Elongation factor Tu domain 2 VIBNI_A3183 PF03764 Elongation factor G, domain IV VIBNI_A3184 PF00177 Ribosomal protein S7p/S5e VIBNI_A3185 PF00164 Ribosomal protein S12/S23 VIBNI_A3186 PF04077 DsrH like protein VIBNI_A3187 PF02635 DsrE/DsrF-like family VIBNI_A3188 PF02635 DsrE/DsrF-like family VIBNI_A3189 PF08348 YheO-like PAS domain VIBNI_A3189 PF13309 HTH domain VIBNI_A3190 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VIBNI_A3190 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VIBNI_A3193 PF01112 Asparaginase VIBNI_A3194 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VIBNI_A3196 PF00999 Sodium/hydrogen exchanger family VIBNI_A3196 PF02254 TrkA-N domain VIBNI_A3197 PF02525 Flavodoxin-like fold VIBNI_A3198 PF12848 ABC transporter VIBNI_A3198 PF00005 ABC transporter VIBNI_A3202 PF00155 Aminotransferase class I and II VIBNI_A3202 PF00392 Bacterial regulatory proteins, gntR family VIBNI_A3203 PF00561 alpha/beta hydrolase fold VIBNI_A3204 PF06794 Uncharacterised protein family (UPF0270) VIBNI_A3205 PF00485 Phosphoribulokinase / Uridine kinase family VIBNI_A3206 PF13545 Crp-like helix-turn-helix domain VIBNI_A3206 PF00027 Cyclic nucleotide-binding domain VIBNI_A3207 PF08032 RNA 2'-O ribose methyltransferase substrate binding VIBNI_A3207 PF00588 SpoU rRNA Methylase family VIBNI_A3208 PF08461 Ribonuclease R winged-helix domain VIBNI_A3208 PF08206 Ribonuclease B OB domain VIBNI_A3208 PF17876 Cold shock domain VIBNI_A3208 PF00773 RNB domain VIBNI_A3208 PF00575 S1 RNA binding domain VIBNI_A3209 PF00884 Sulfatase VIBNI_A3209 PF11893 Domain of unknown function (DUF3413) VIBNI_A3210 PF02082 Transcriptional regulator VIBNI_A3211 PF00175 Oxidoreductase NAD-binding domain VIBNI_A3211 PF00042 Globin VIBNI_A3211 PF00970 Oxidoreductase FAD-binding domain VIBNI_A3212 PF08238 Sel1 repeat VIBNI_A3213 PF00709 Adenylosuccinate synthetase VIBNI_A3214 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) VIBNI_A3215 PF01145 SPFH domain / Band 7 family VIBNI_A3216 PF01145 SPFH domain / Band 7 family VIBNI_A3216 PF12221 Bacterial membrane protein N terminal VIBNI_A3217 PF16360 GTP-binding GTPase Middle Region VIBNI_A3217 PF13167 GTP-binding GTPase N-terminal VIBNI_A3217 PF01926 50S ribosome-binding GTPase VIBNI_A3218 PF17209 Hfq protein VIBNI_A3220 PF01119 DNA mismatch repair protein, C-terminal domain VIBNI_A3220 PF08676 MutL C terminal dimerisation domain VIBNI_A3221 PF01520 N-acetylmuramoyl-L-alanine amidase VIBNI_A3222 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE VIBNI_A3223 PF08331 Domain of unknown function (DUF1730) VIBNI_A3227 PF00929 Exonuclease VIBNI_A3228 PF03193 RsgA GTPase VIBNI_A3229 PF02666 Phosphatidylserine decarboxylase VIBNI_A3230 PF02080 TrkA-C domain VIBNI_A3230 PF03600 Citrate transporter VIBNI_A3231 PF03009 Glycerophosphoryl diester phosphodiesterase family VIBNI_A3234 PF00152 tRNA synthetases class II (D, K and N) VIBNI_A3236 PF02910 Fumarate reductase flavoprotein C-term VIBNI_A3236 PF00890 FAD binding domain VIBNI_A3237 PF13183 4Fe-4S dicluster domain VIBNI_A3237 PF13085 2Fe-2S iron-sulfur cluster binding domain VIBNI_A3238 PF02300 Fumarate reductase subunit C VIBNI_A3239 PF02313 Fumarate reductase subunit D VIBNI_A3244 PF08207 Elongation factor P (EF-P) KOW-like domain VIBNI_A3244 PF09285 Elongation factor P, C-terminal VIBNI_A3244 PF01132 Elongation factor P (EF-P) OB domain VIBNI_A3245 PF04055 Radical SAM superfamily VIBNI_A3247 PF02308 MgtC family VIBNI_A3249 PF00118 TCP-1/cpn60 chaperonin family VIBNI_A3250 PF00166 Chaperonin 10 Kd subunit VIBNI_A3252 PF00365 Phosphofructokinase VIBNI_A3253 PF16916 Dimerisation domain of Zinc Transporter VIBNI_A3253 PF01545 Cation efflux family VIBNI_A3257 PF00486 Transcriptional regulatory protein, C terminal VIBNI_A3257 PF00072 Response regulator receiver domain VIBNI_A3258 PF16527 Two-component sensor protein CpxA, periplasmic domain VIBNI_A3258 PF00672 HAMP domain VIBNI_A3258 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_A3258 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_A3259 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain VIBNI_A3259 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VIBNI_A3260 PF00588 SpoU rRNA Methylase family VIBNI_A3265 PF05016 ParE toxin of type II toxin-antitoxin system, parDE VIBNI_A3277 PF04186 FxsA cytoplasmic membrane protein VIBNI_A3278 PF10415 Fumarase C C-terminus VIBNI_A3278 PF00206 Lyase VIBNI_A3279 PF03605 Anaerobic c4-dicarboxylate membrane transporter VIBNI_A3280 PF11412 Disulphide bond corrector protein DsbC VIBNI_A3280 PF02683 Cytochrome C biogenesis protein transmembrane region VIBNI_A3282 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_A3282 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_A3282 PF02743 Cache domain VIBNI_A3283 PF00072 Response regulator receiver domain VIBNI_A3283 PF02954 Bacterial regulatory protein, Fis family VIBNI_A3283 PF00158 Sigma-54 interaction domain VIBNI_A3285 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_A3286 PF00005 ABC transporter VIBNI_A3286 PF08402 TOBE domain VIBNI_A3287 PF00196 Bacterial regulatory proteins, luxR family VIBNI_A3287 PF00072 Response regulator receiver domain VIBNI_A3289 PF00474 Sodium:solute symporter family VIBNI_A3293 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_A3293 PF01627 Hpt domain VIBNI_A3293 PF00072 Response regulator receiver domain VIBNI_A3293 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_A3293 PF00672 HAMP domain VIBNI_A3294 PF12832 MFS_1 like family VIBNI_A3298 PF16177 Acetyl-coenzyme A synthetase N-terminus VIBNI_A3298 PF00501 AMP-binding enzyme VIBNI_A3298 PF13193 AMP-binding enzyme C-terminal domain VIBNI_A3300 PF00892 EamA-like transporter family VIBNI_A3301 PF01220 Dehydroquinase class II VIBNI_A3302 PF00364 Biotin-requiring enzyme VIBNI_A3303 PF02785 Biotin carboxylase C-terminal domain VIBNI_A3303 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VIBNI_A3303 PF00289 Biotin carboxylase, N-terminal domain VIBNI_A3306 PF01207 Dihydrouridine synthase (Dus) VIBNI_A3307 PF02954 Bacterial regulatory protein, Fis family VIBNI_A3309 PF17200 Single Cache domain 2 VIBNI_A3309 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBNI_A3309 PF00672 HAMP domain VIBNI_A3310 PF08240 Alcohol dehydrogenase GroES-like domain VIBNI_A3310 PF00107 Zinc-binding dehydrogenase VIBNI_A3311 PF13411 MerR HTH family regulatory protein VIBNI_A3312 PF01808 AICARFT/IMPCHase bienzyme VIBNI_A3312 PF02142 MGS-like domain VIBNI_A3313 PF02844 Phosphoribosylglycinamide synthetase, N domain VIBNI_A3313 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain VIBNI_A3313 PF02843 Phosphoribosylglycinamide synthetase, C domain VIBNI_A3315 PF00216 Bacterial DNA-binding protein VIBNI_A3316 PF01595 Cyclin M transmembrane N-terminal domain VIBNI_A3316 PF00571 CBS domain VIBNI_A3317 PF03466 LysR substrate binding domain VIBNI_A3317 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_A3319 PF04222 Protein of unknown function (DUF416) VIBNI_A3320 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VIBNI_A3321 PF03167 Uracil DNA glycosylase superfamily VIBNI_A3322 PF01208 Uroporphyrinogen decarboxylase (URO-D) VIBNI_A3323 PF09297 NADH pyrophosphatase zinc ribbon domain VIBNI_A3323 PF00293 NUDIX domain VIBNI_A3324 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ VIBNI_A3325 PF00623 RNA polymerase Rpb1, domain 2 VIBNI_A3325 PF04997 RNA polymerase Rpb1, domain 1 VIBNI_A3325 PF04998 RNA polymerase Rpb1, domain 5 VIBNI_A3325 PF05000 RNA polymerase Rpb1, domain 4 VIBNI_A3325 PF04983 RNA polymerase Rpb1, domain 3 VIBNI_A3326 PF10385 RNA polymerase beta subunit external 1 domain VIBNI_A3326 PF04561 RNA polymerase Rpb2, domain 2 VIBNI_A3326 PF04563 RNA polymerase beta subunit VIBNI_A3326 PF04565 RNA polymerase Rpb2, domain 3 VIBNI_A3326 PF00562 RNA polymerase Rpb2, domain 6 VIBNI_A3326 PF04560 RNA polymerase Rpb2, domain 7 VIBNI_A3327 PF00542 Ribosomal protein L7/L12 C-terminal domain VIBNI_A3327 PF16320 Ribosomal protein L7/L12 dimerisation domain VIBNI_A3328 PF00466 Ribosomal protein L10 VIBNI_A3330 PF00687 Ribosomal protein L1p/L10e family VIBNI_A3331 PF00298 Ribosomal protein L11, RNA binding domain VIBNI_A3331 PF03946 Ribosomal protein L11, N-terminal domain VIBNI_A3332 PF02357 Transcription termination factor nusG VIBNI_A3332 PF00467 KOW motif VIBNI_A3333 PF00584 SecE/Sec61-gamma subunits of protein translocation complex VIBNI_A3334 PF03143 Elongation factor Tu C-terminal domain VIBNI_A3334 PF03144 Elongation factor Tu domain 2 VIBNI_A3334 PF00009 Elongation factor Tu GTP binding domain VIBNI_A3335 PF00485 Phosphoribulokinase / Uridine kinase family VIBNI_A3336 PF03099 Biotin/lipoate A/B protein ligase family VIBNI_A3336 PF08279 HTH domain VIBNI_A3336 PF02237 Biotin protein ligase C terminal domain VIBNI_A3337 PF01565 FAD binding domain VIBNI_A3337 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain VIBNI_A3338 PF13673 Acetyltransferase (GNAT) domain VIBNI_A3339 PF13091 PLD-like domain VIBNI_A3348 PF01177 Asp/Glu/Hydantoin racemase VIBNI_A3350 PF00593 TonB dependent receptor VIBNI_A3350 PF07715 TonB-dependent Receptor Plug Domain VIBNI_A3351 PF05958 tRNA (Uracil-5-)-methyltransferase VIBNI_A3353 PF00440 Bacterial regulatory proteins, tetR family VIBNI_A3355 PF01554 MatE VIBNI_A3356 PF04072 Leucine carboxyl methyltransferase VIBNI_A3357 PF01726 LexA DNA binding domain VIBNI_A3357 PF00717 Peptidase S24-like VIBNI_A3359 PF01553 Acyltransferase VIBNI_A3362 PF00561 alpha/beta hydrolase fold VIBNI_A3363 PF00156 Phosphoribosyl transferase domain VIBNI_A3364 PF01521 Iron-sulphur cluster biosynthesis VIBNI_A3364 PF01106 NifU-like domain VIBNI_A3366 PF00089 Trypsin VIBNI_A3367 PF00459 Inositol monophosphatase family VIBNI_A3368 PF00293 NUDIX domain VIBNI_A3369 PF01203 Type II secretion system (T2SS), protein N VIBNI_A3370 PF04612 Type II secretion system (T2SS), protein M VIBNI_A3371 PF05134 Type II secretion system (T2SS), protein L VIBNI_A3371 PF12693 GspL periplasmic domain VIBNI_A3372 PF03934 Type II secretion system (T2SS), protein K VIBNI_A3373 PF11612 Type II secretion system (T2SS), protein J VIBNI_A3373 PF07963 Prokaryotic N-terminal methylation motif VIBNI_A3374 PF07963 Prokaryotic N-terminal methylation motif VIBNI_A3374 PF02501 Type II secretion system (T2SS), protein I VIBNI_A3375 PF12019 Type II transport protein GspH VIBNI_A3376 PF07963 Prokaryotic N-terminal methylation motif VIBNI_A3376 PF08334 Type II secretion system (T2SS), protein G VIBNI_A3377 PF00482 Type II secretion system (T2SS), protein F VIBNI_A3378 PF00437 Type II/IV secretion system protein VIBNI_A3379 PF00263 Bacterial type II and III secretion system protein VIBNI_A3379 PF03958 Bacterial type II/III secretion system short domain VIBNI_A3380 PF11356 Type II secretion system protein C VIBNI_A3381 PF01479 S4 domain VIBNI_A3382 PF01430 Hsp33 protein VIBNI_A3385 PF00583 Acetyltransferase (GNAT) family VIBNI_A3385 PF09500 Putative thioesterase (yiiD_Cterm) VIBNI_A3386 PF02580 D-Tyr-tRNA(Tyr) deacylase VIBNI_A3387 PF03631 Virulence factor BrkB VIBNI_A3390 PF00749 tRNA synthetases class I (E and Q), catalytic domain VIBNI_A3398 PF04055 Radical SAM superfamily VIBNI_A3398 PF06969 HemN C-terminal domain VIBNI_A3400 PF04220 Der GTPase activator (YihI) VIBNI_A3402 PF00034 Cytochrome c VIBNI_A3403 PF01926 50S ribosome-binding GTPase VIBNI_A3404 PF01367 5'-3' exonuclease, C-terminal SAM fold VIBNI_A3404 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain VIBNI_A3404 PF00476 DNA polymerase family A VIBNI_A3404 PF01612 3'-5' exonuclease VIBNI_A3407 PF00490 Delta-aminolevulinic acid dehydratase VIBNI_A3410 PF01026 TatD related DNase VIBNI_A3411 PF00902 Sec-independent protein translocase protein (TatC) VIBNI_A3412 PF02416 mttA/Hcf106 family VIBNI_A3415 PF02036 SCP-2 sterol transfer family VIBNI_A3416 PF01209 ubiE/COQ5 methyltransferase family VIBNI_A3417 PF02646 RmuC family VIBNI_A3419 PF04219 Protein of unknown function, DUF VIBNI_A3420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_A3420 PF03466 LysR substrate binding domain VIBNI_A3421 PF00356 Bacterial regulatory proteins, lacI family VIBNI_A3429 PF00437 Type II/IV secretion system protein VIBNI_A3432 PF13629 Pilus formation protein N terminal region VIBNI_A3432 PF04972 BON domain VIBNI_A3432 PF00263 Bacterial type II and III secretion system protein VIBNI_A3439 PF18766 SWI2/SNF2 ATPase VIBNI_A3439 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) VIBNI_A3439 PF11867 Domain of unknown function (DUF3387) VIBNI_A3442 PF01420 Type I restriction modification DNA specificity domain VIBNI_A3443 PF02384 N-6 DNA Methylase VIBNI_A3445 PF13401 AAA domain VIBNI_A3445 PF11426 Tn7 transposition regulator TnsC VIBNI_A3447 PF08721 TnsA endonuclease C terminal VIBNI_A3447 PF08722 TnsA endonuclease N terminal VIBNI_A3449 PF10625 Universal stress protein B (UspB) VIBNI_A3450 PF00210 Ferritin-like domain VIBNI_A3451 PF00582 Universal stress protein family VIBNI_A3454 PF04445 Putative SAM-dependent methyltransferase VIBNI_A3455 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_A3455 PF00563 EAL domain VIBNI_A3455 PF08448 PAS fold VIBNI_A3457 PF01037 Lrp/AsnC ligand binding domain VIBNI_A3458 PF01432 Peptidase family M3 VIBNI_A3459 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ VIBNI_A3460 PF07992 Pyridine nucleotide-disulphide oxidoreductase VIBNI_A3460 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VIBNI_A3462 PF00535 Glycosyl transferase family 2 VIBNI_A3468 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family VIBNI_A3471 PF01565 FAD binding domain VIBNI_A3471 PF04030 D-arabinono-1,4-lactone oxidase VIBNI_A3473 PF01658 Myo-inositol-1-phosphate synthase VIBNI_A3475 PF04608 Phosphatidylglycerophosphatase A VIBNI_A3478 PF03951 Glutamine synthetase, beta-Grasp domain VIBNI_A3478 PF00120 Glutamine synthetase, catalytic domain VIBNI_A3480 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_A3480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_A3480 PF00989 PAS fold VIBNI_A3481 PF02954 Bacterial regulatory protein, Fis family VIBNI_A3481 PF00072 Response regulator receiver domain VIBNI_A3481 PF00158 Sigma-54 interaction domain VIBNI_A3482 PF13188 PAS domain VIBNI_A3482 PF03707 Bacterial signalling protein N terminal repeat VIBNI_A3482 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_A3482 PF00563 EAL domain VIBNI_A3483 PF00962 Adenosine/AMP deaminase VIBNI_A3484 PF00248 Aldo/keto reductase family VIBNI_A3485 PF03466 LysR substrate binding domain VIBNI_A3485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_A3488 PF12911 N-terminal TM domain of oligopeptide transport permease C VIBNI_A3488 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_A3490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VIBNI_A3491 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VIBNI_A3491 PF00005 ABC transporter VIBNI_A3493 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VIBNI_A3494 PF00580 UvrD/REP helicase N-terminal domain VIBNI_A3494 PF13361 UvrD-like helicase C-terminal domain VIBNI_A3495 PF00440 Bacterial regulatory proteins, tetR family VIBNI_A3496 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VIBNI_A3497 PF00873 AcrB/AcrD/AcrF family VIBNI_A3498 PF04380 Membrane fusogenic activity VIBNI_A3499 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain VIBNI_A3499 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain VIBNI_A3500 PF03466 LysR substrate binding domain VIBNI_A3500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_A3505 PF01507 Phosphoadenosine phosphosulfate reductase family VIBNI_A3506 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain VIBNI_A3506 PF01077 Nitrite and sulphite reductase 4Fe-4S domain VIBNI_A3507 PF00175 Oxidoreductase NAD-binding domain VIBNI_A3507 PF00667 FAD binding domain VIBNI_A3507 PF00258 Flavodoxin VIBNI_A3510 PF09583 Phage shock protein G (Phageshock_PspG) VIBNI_A3511 PF01207 Dihydrouridine synthase (Dus) VIBNI_A3515 PF13539 D-alanyl-D-alanine carboxypeptidase VIBNI_A3538 PF01475 Ferric uptake regulator family VIBNI_A3540 PF00342 Phosphoglucose isomerase VIBNI_A3541 PF01894 Uncharacterised protein family UPF0047 VIBNI_A3546 PF00842 Alanine racemase, C-terminal domain VIBNI_A3546 PF01168 Alanine racemase, N-terminal domain VIBNI_A3547 PF00772 DnaB-like helicase N terminal domain VIBNI_A3547 PF03796 DnaB-like helicase C terminal domain VIBNI_A3549 PF03948 Ribosomal protein L9, C-terminal domain VIBNI_A3549 PF01281 Ribosomal protein L9, N-terminal domain VIBNI_A3550 PF01084 Ribosomal protein S18 VIBNI_A3551 PF00436 Single-strand binding protein family VIBNI_A3554 PF00171 Aldehyde dehydrogenase family VIBNI_A3555 PF04958 Arginine N-succinyltransferase beta subunit VIBNI_A3556 PF00202 Aminotransferase class-III VIBNI_A3557 PF00117 Glutamine amidotransferase class-I VIBNI_A3558 PF00082 Subtilase family VIBNI_A3558 PF01483 Proprotein convertase P-domain VIBNI_A3560 PF06483 Chitinase C VIBNI_A3560 PF00704 Glycosyl hydrolases family 18 VIBNI_A3569 PF01494 FAD binding domain VIBNI_A3571 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_A3571 PF03466 LysR substrate binding domain VIBNI_A3574 PF00579 tRNA synthetases class I (W and Y) VIBNI_A3575 PF13419 Haloacid dehalogenase-like hydrolase VIBNI_A3576 PF00834 Ribulose-phosphate 3 epimerase family VIBNI_A3577 PF02086 D12 class N6 adenine-specific DNA methyltransferase VIBNI_A3579 PF01761 3-dehydroquinate synthase VIBNI_A3580 PF01202 Shikimate kinase VIBNI_A3581 PF03958 Bacterial type II/III secretion system short domain VIBNI_A3581 PF11741 AMIN domain VIBNI_A3581 PF00263 Bacterial type II and III secretion system protein VIBNI_A3581 PF07660 Secretin and TonB N terminus short domain VIBNI_A3586 PF17092 Penicillin-binding protein OB-like domain VIBNI_A3586 PF00912 Transglycosylase VIBNI_A3586 PF00905 Penicillin binding protein transpeptidase domain VIBNI_A3587 PF03466 LysR substrate binding domain VIBNI_A3587 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_A3588 PF00462 Glutaredoxin VIBNI_A3588 PF08534 Redoxin VIBNI_A3589 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VIBNI_A3589 PF07992 Pyridine nucleotide-disulphide oxidoreductase VIBNI_A3590 PF00245 Alkaline phosphatase VIBNI_A3591 PF00583 Acetyltransferase (GNAT) family VIBNI_A3591 PF00206 Lyase VIBNI_A3591 PF14698 Argininosuccinate lyase C-terminal VIBNI_A3592 PF00764 Arginosuccinate synthase VIBNI_A3593 PF00696 Amino acid kinase family VIBNI_A3594 PF01118 Semialdehyde dehydrogenase, NAD binding domain VIBNI_A3594 PF02774 Semialdehyde dehydrogenase, dimerisation domain VIBNI_A3596 PF00311 Phosphoenolpyruvate carboxylase VIBNI_A3598 PF02219 Methylenetetrahydrofolate reductase VIBNI_A3599 PF03447 Homoserine dehydrogenase, NAD binding domain VIBNI_A3599 PF00696 Amino acid kinase family VIBNI_A3599 PF00742 Homoserine dehydrogenase VIBNI_A3600 PF01053 Cys/Met metabolism PLP-dependent enzyme VIBNI_A3601 PF01340 Met Apo-repressor, MetJ VIBNI_A3602 PF00390 Malic enzyme, N-terminal domain VIBNI_A3602 PF03949 Malic enzyme, NAD binding domain VIBNI_A3604 PF18074 Primosomal protein N C-terminal domain VIBNI_A3604 PF00271 Helicase conserved C-terminal domain VIBNI_A3604 PF17764 3′ DNA-binding domain (3′BD) VIBNI_A3604 PF18319 PriA DNA helicase Cys-rich region (CRR) domain VIBNI_A3604 PF00270 DEAD/DEAH box helicase VIBNI_A3605 PF00356 Bacterial regulatory proteins, lacI family VIBNI_A3608 PF00004 ATPase family associated with various cellular activities (AAA) VIBNI_A3608 PF07724 AAA domain (Cdc48 subfamily) VIBNI_A3609 PF01040 UbiA prenyltransferase family VIBNI_A3610 PF03737 Aldolase/RraA VIBNI_A3612 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded VIBNI_A3617 PF00121 Triosephosphate isomerase VIBNI_A3618 PF01614 Bacterial transcriptional regulator VIBNI_A3618 PF09339 IclR helix-turn-helix domain VIBNI_A3619 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VIBNI_A3622 PF05199 GMC oxidoreductase VIBNI_A3622 PF00732 GMC oxidoreductase VIBNI_A3624 PF00132 Bacterial transferase hexapeptide (six repeats) VIBNI_A3624 PF06426 Serine acetyltransferase, N-terminal VIBNI_A3625 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus VIBNI_A3625 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus VIBNI_A3627 PF02556 Preprotein translocase subunit SecB VIBNI_A3628 PF00581 Rhodanese-like domain VIBNI_A3629 PF01835 MG2 domain VIBNI_A3629 PF17962 Bacterial macroglobulin domain 6 VIBNI_A3629 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain VIBNI_A3629 PF11974 Bacterial alpha-2-macroglobulin MG3 domain VIBNI_A3629 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain VIBNI_A3629 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain VIBNI_A3629 PF00207 Alpha-2-macroglobulin family VIBNI_A3629 PF07703 Alpha-2-macroglobulin bait region domain VIBNI_A3630 PF00905 Penicillin binding protein transpeptidase domain VIBNI_A3630 PF00912 Transglycosylase VIBNI_A3630 PF06832 Penicillin-Binding Protein C-terminus Family VIBNI_A3631 PF01676 Metalloenzyme superfamily VIBNI_A3631 PF06415 BPG-independent PGAM N-terminus (iPGM_N) VIBNI_A3632 PF01551 Peptidase family M23 VIBNI_A3633 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VIBNI_A3633 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VIBNI_A3633 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain VIBNI_A3634 PF02397 Bacterial sugar transferase VIBNI_A3635 PF01370 NAD dependent epimerase/dehydratase family VIBNI_A3636 PF02719 Polysaccharide biosynthesis protein VIBNI_A3638 PF00535 Glycosyl transferase family 2 VIBNI_A3641 PF00005 ABC transporter VIBNI_A3641 PF08239 Bacterial SH3 domain VIBNI_A3643 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase VIBNI_A3644 PF04321 RmlD substrate binding domain VIBNI_A3645 PF00483 Nucleotidyl transferase VIBNI_A3646 PF16363 GDP-mannose 4,6 dehydratase VIBNI_A3651 PF01370 NAD dependent epimerase/dehydratase family VIBNI_A3652 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VIBNI_A3652 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VIBNI_A3652 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain VIBNI_A3653 PF02719 Polysaccharide biosynthesis protein VIBNI_A3654 PF02397 Bacterial sugar transferase VIBNI_A3655 PF01370 NAD dependent epimerase/dehydratase family VIBNI_A3656 PF00535 Glycosyl transferase family 2 VIBNI_A3659 PF13439 Glycosyltransferase Family 4 VIBNI_A3659 PF00534 Glycosyl transferases group 1 VIBNI_A3660 PF00534 Glycosyl transferases group 1 VIBNI_A3660 PF13439 Glycosyltransferase Family 4 VIBNI_A3661 PF09587 Bacterial capsule synthesis protein PGA_cap VIBNI_A3663 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VIBNI_A3678 PF00440 Bacterial regulatory proteins, tetR family VIBNI_A3678 PF08361 MAATS-type transcriptional repressor, C-terminal region VIBNI_A3681 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF VIBNI_A3683 PF06082 Exopolysaccharide biosynthesis protein YbjH VIBNI_A3684 PF01370 NAD dependent epimerase/dehydratase family VIBNI_A3685 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VIBNI_A3686 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) VIBNI_A3686 PF00534 Glycosyl transferases group 1 VIBNI_A3690 PF00535 Glycosyl transferase family 2 VIBNI_A3691 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VIBNI_A3692 PF00535 Glycosyl transferase family 2 VIBNI_A3693 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VIBNI_A3694 PF01467 Cytidylyltransferase-like VIBNI_A3695 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain VIBNI_A3695 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain VIBNI_A3695 PF06827 Zinc finger found in FPG and IleRS VIBNI_A3697 PF00471 Ribosomal protein L33 VIBNI_A3699 PF04002 RadC-like JAB domain VIBNI_A3700 PF03150 Di-haem cytochrome c peroxidase VIBNI_A3700 PF00034 Cytochrome c VIBNI_A3701 PF02441 Flavoprotein VIBNI_A3701 PF04127 DNA / pantothenate metabolism flavoprotein VIBNI_A3702 PF00440 Bacterial regulatory proteins, tetR family VIBNI_A3703 PF03279 Bacterial lipid A biosynthesis acyltransferase VIBNI_A3704 PF00156 Phosphoribosyl transferase domain VIBNI_A3708 PF03755 YicC-like family, N-terminal region VIBNI_A3708 PF08340 Domain of unknown function (DUF1732) VIBNI_A3710 PF00625 Guanylate kinase VIBNI_A3711 PF01192 RNA polymerase Rpb6 VIBNI_A3712 PF02824 TGS domain VIBNI_A3712 PF04607 Region found in RelA / SpoT proteins VIBNI_A3712 PF13291 ACT domain VIBNI_A3713 PF12105 SpoU, rRNA methylase, C-terminal VIBNI_A3713 PF00588 SpoU rRNA Methylase family VIBNI_A3716 PF00668 Condensation domain VIBNI_A3716 PF13193 AMP-binding enzyme C-terminal domain VIBNI_A3716 PF00501 AMP-binding enzyme VIBNI_A3716 PF00550 Phosphopantetheine attachment site VIBNI_A3717 PF00501 AMP-binding enzyme VIBNI_A3717 PF13193 AMP-binding enzyme C-terminal domain VIBNI_A3717 PF00668 Condensation domain VIBNI_A3717 PF00975 Thioesterase domain VIBNI_A3717 PF00550 Phosphopantetheine attachment site VIBNI_A3718 PF00391 PEP-utilising enzyme, mobile domain VIBNI_A3718 PF00975 Thioesterase domain VIBNI_A3718 PF00550 Phosphopantetheine attachment site VIBNI_A3718 PF00501 AMP-binding enzyme VIBNI_A3718 PF08241 Methyltransferase domain VIBNI_A3718 PF00668 Condensation domain VIBNI_A3718 PF13193 AMP-binding enzyme C-terminal domain VIBNI_A3719 PF00501 AMP-binding enzyme VIBNI_A3719 PF00550 Phosphopantetheine attachment site VIBNI_A3719 PF00668 Condensation domain VIBNI_A3719 PF13193 AMP-binding enzyme C-terminal domain VIBNI_A3721 PF17191 RecG wedge domain VIBNI_A3721 PF00270 DEAD/DEAH box helicase VIBNI_A3721 PF00271 Helicase conserved C-terminal domain VIBNI_A3722 PF00672 HAMP domain VIBNI_A3722 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_A3722 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_A3723 PF00486 Transcriptional regulatory protein, C terminal VIBNI_A3723 PF00072 Response regulator receiver domain VIBNI_A3724 PF00384 Molybdopterin oxidoreductase VIBNI_A3725 PF02634 FdhD/NarQ family VIBNI_A3726 PF01272 Transcription elongation factor, GreA/GreB, C-term VIBNI_A3726 PF03449 Transcription elongation factor, N-terminal VIBNI_A3727 PF17674 HHH domain VIBNI_A3727 PF09371 Tex-like protein N-terminal domain VIBNI_A3727 PF16921 Tex protein YqgF-like domain VIBNI_A3727 PF00575 S1 RNA binding domain VIBNI_A3731 PF04345 Chorismate lyase VIBNI_A3733 PF01694 Rhomboid family VIBNI_A3733 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease VIBNI_A3734 PF00581 Rhodanese-like domain VIBNI_A3736 PF04542 Sigma-70 region 2 VIBNI_A3736 PF00140 Sigma-70 factor, region 1.2 VIBNI_A3736 PF04545 Sigma-70, region 4 VIBNI_A3737 PF18075 FtsX extracellular domain VIBNI_A3738 PF00005 ABC transporter VIBNI_A3739 PF00448 SRP54-type protein, GTPase domain VIBNI_A3739 PF02881 SRP54-type protein, helical bundle domain VIBNI_A3742 PF01914 MarC family integral membrane protein VIBNI_A3747 PF01757 Acyltransferase family VIBNI_A3748 PF00106 short chain dehydrogenase VIBNI_A3749 PF03466 LysR substrate binding domain VIBNI_A3749 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_A3750 PF00210 Ferritin-like domain VIBNI_A3753 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VIBNI_A3753 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VIBNI_A3754 PF01022 Bacterial regulatory protein, arsR family VIBNI_A3755 PF00563 EAL domain VIBNI_A3755 PF08668 HDOD domain VIBNI_A3756 PF01810 LysE type translocator VIBNI_A3757 PF12146 Serine aminopeptidase, S33 VIBNI_A3762 PF00171 Aldehyde dehydrogenase family VIBNI_A3763 PF10442 FIST C domain VIBNI_A3763 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_A3763 PF00563 EAL domain VIBNI_A3763 PF08495 FIST N domain VIBNI_A3764 PF13419 Haloacid dehalogenase-like hydrolase VIBNI_A3765 PF00589 Phage integrase family VIBNI_A3765 PF02899 Phage integrase, N-terminal SAM-like domain VIBNI_A3767 PF01678 Diaminopimelate epimerase VIBNI_A3768 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain VIBNI_A3768 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain VIBNI_A3769 PF01491 Frataxin-like domain VIBNI_A3770 PF12633 Adenylate cyclase NT domain VIBNI_A3770 PF01295 Adenylate cyclase, class-I VIBNI_A3771 PF03900 Porphobilinogen deaminase, C-terminal domain VIBNI_A3771 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain VIBNI_A3772 PF02602 Uroporphyrinogen-III synthase HemD VIBNI_A3773 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase VIBNI_A3774 PF07219 HemY protein N-terminus VIBNI_A3774 PF07719 Tetratricopeptide repeat VIBNI_A3781 PF00175 Oxidoreductase NAD-binding domain VIBNI_A3783 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase VIBNI_A3785 PF07498 Rho termination factor, N-terminal domain VIBNI_A3785 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VIBNI_A3785 PF07497 Rho termination factor, RNA-binding domain VIBNI_A3786 PF00085 Thioredoxin VIBNI_A3787 PF00271 Helicase conserved C-terminal domain VIBNI_A3787 PF00270 DEAD/DEAH box helicase VIBNI_A3788 PF02541 Ppx/GppA phosphatase family VIBNI_A3790 PF03480 Bacterial extracellular solute-binding protein, family 7 VIBNI_A3791 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VIBNI_A3795 PF00392 Bacterial regulatory proteins, gntR family VIBNI_A3795 PF07702 UTRA domain VIBNI_A3796 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VIBNI_A3796 PF02894 Oxidoreductase family, C-terminal alpha/beta domain VIBNI_A3797 PF02592 Putative vitamin uptake transporter VIBNI_A3799 PF00270 DEAD/DEAH box helicase VIBNI_A3799 PF00570 HRDC domain VIBNI_A3799 PF16124 RecQ zinc-binding VIBNI_A3799 PF00271 Helicase conserved C-terminal domain VIBNI_A3799 PF09382 RQC domain VIBNI_A3800 PF00892 EamA-like transporter family VIBNI_A3802 PF01810 LysE type translocator VIBNI_A3804 PF00580 UvrD/REP helicase N-terminal domain VIBNI_A3804 PF13361 UvrD-like helicase C-terminal domain VIBNI_A3806 PF05114 Protein of unknown function (DUF692) VIBNI_A3810 PF07690 Major Facilitator Superfamily VIBNI_A3811 PF03466 LysR substrate binding domain VIBNI_A3811 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_A3812 PF00557 Metallopeptidase family M24 VIBNI_A3812 PF01321 Creatinase/Prolidase N-terminal domain VIBNI_A3812 PF00557 Metallopeptidase family M24 VIBNI_A3812 PF01321 Creatinase/Prolidase N-terminal domain VIBNI_A3813 PF06968 Biotin and Thiamin Synthesis associated domain VIBNI_A3813 PF04055 Radical SAM superfamily VIBNI_A3814 PF05690 Thiazole biosynthesis protein ThiG VIBNI_A3816 PF00899 ThiF family VIBNI_A3817 PF02581 Thiamine monophosphate synthase VIBNI_A3819 PF02537 CrcB-like protein, Camphor Resistance (CrcB) VIBNI_A3825 PF00132 Bacterial transferase hexapeptide (six repeats) VIBNI_A3826 PF07369 Protein of unknown function (DUF1488) VIBNI_A3827 PF18317 Shikimate 5'-dehydrogenase C-terminal domain VIBNI_A3827 PF01488 Shikimate / quinate 5-dehydrogenase VIBNI_A3827 PF08501 Shikimate dehydrogenase substrate binding domain VIBNI_A3828 PF01218 Coproporphyrinogen III oxidase VIBNI_A3829 PF01300 Telomere recombination VIBNI_A3830 PF00731 AIR carboxylase VIBNI_A3831 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain VIBNI_A3831 PF02222 ATP-grasp domain VIBNI_A3832 PF01396 Topoisomerase DNA binding C4 zinc finger VIBNI_A3833 PF04361 Protein of unknown function (DUF494) VIBNI_A3834 PF17782 DprA winged helix domain VIBNI_A3834 PF02481 DNA recombination-mediator protein A VIBNI_A3835 PF01476 LysM domain VIBNI_A3836 PF01327 Polypeptide deformylase VIBNI_A3837 PF00551 Formyl transferase VIBNI_A3837 PF02911 Formyl transferase, C-terminal domain VIBNI_A3838 PF01029 NusB family VIBNI_A3838 PF01189 16S rRNA methyltransferase RsmB/F VIBNI_A3839 PF02254 TrkA-N domain VIBNI_A3839 PF02080 TrkA-C domain VIBNI_A3840 PF02386 Cation transport protein VIBNI_A3841 PF03006 Haemolysin-III related VIBNI_A3842 PF07070 SpoOM protein VIBNI_A3843 PF06288 Protein of unknown function (DUF1040) VIBNI_A3844 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase VIBNI_A3844 PF12801 4Fe-4S binding domain VIBNI_A3844 PF13746 4Fe-4S dicluster domain VIBNI_A3845 PF01636 Phosphotransferase enzyme family VIBNI_A3846 PF01323 DSBA-like thioredoxin domain VIBNI_A3847 PF01553 Acyltransferase VIBNI_A3849 PF13335 Magnesium chelatase, subunit ChlI C-terminal VIBNI_A3849 PF01078 Magnesium chelatase, subunit ChlI VIBNI_A3850 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VIBNI_A3850 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VIBNI_A3850 PF00205 Thiamine pyrophosphate enzyme, central domain VIBNI_A3852 PF01063 Amino-transferase class IV VIBNI_A3853 PF00920 Dehydratase family VIBNI_A3854 PF00585 C-terminal regulatory domain of Threonine dehydratase VIBNI_A3854 PF00291 Pyridoxal-phosphate dependent enzyme VIBNI_A3855 PF03466 LysR substrate binding domain VIBNI_A3855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_A3856 PF07690 Major Facilitator Superfamily VIBNI_A3857 PF00497 Bacterial extracellular solute-binding proteins, family 3 VIBNI_A3858 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_A3859 PF00132 Bacterial transferase hexapeptide (six repeats) VIBNI_A3859 PF14602 Hexapeptide repeat of succinyl-transferase VIBNI_A3859 PF12804 MobA-like NTP transferase domain VIBNI_A3860 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain VIBNI_A3860 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain VIBNI_A3861 PF02874 ATP synthase alpha/beta family, beta-barrel domain VIBNI_A3861 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VIBNI_A3862 PF00231 ATP synthase VIBNI_A3863 PF00306 ATP synthase alpha/beta chain, C terminal domain VIBNI_A3863 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VIBNI_A3863 PF02874 ATP synthase alpha/beta family, beta-barrel domain VIBNI_A3865 PF00430 ATP synthase B/B' CF(0) VIBNI_A3866 PF00137 ATP synthase subunit C VIBNI_A3867 PF00119 ATP synthase A chain VIBNI_A3868 PF03899 ATP synthase I chain VIBNI_A3869 PF02195 ParB-like nuclease domain VIBNI_A3869 PF17762 HTH domain found in ParB protein VIBNI_A3870 PF13614 AAA domain VIBNI_A3871 PF02527 rRNA small subunit methyltransferase G VIBNI_A3872 PF13932 GidA associated domain VIBNI_A3872 PF01134 Glucose inhibited division protein A VIBNI_A3873 PF00258 Flavodoxin VIBNI_A3874 PF03544 Gram-negative bacterial TonB protein C-terminal VIBNI_A3875 PF02472 Biopolymer transport protein ExbD/TolR VIBNI_A3876 PF01618 MotA/TolQ/ExbB proton channel family VIBNI_A3884 PF08281 Sigma-70, region 4 VIBNI_A3884 PF04542 Sigma-70 region 2 VIBNI_A3885 PF12631 MnmE helical domain VIBNI_A3885 PF10396 GTP-binding protein TrmE N-terminus VIBNI_A3885 PF01926 50S ribosome-binding GTPase VIBNI_A3886 PF02096 60Kd inner membrane protein VIBNI_A3886 PF14849 YidC periplasmic domain VIBNI_A3887 PF00825 Ribonuclease P VIBNI_A3888 PF00468 Ribosomal protein L34 VIBNI_A3889 PF00005 ABC transporter VIBNI_A3890 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_A3891 PF00497 Bacterial extracellular solute-binding proteins, family 3 VIBNI_B0002 PF18607 ParA helix turn helix domain VIBNI_B0002 PF13614 AAA domain VIBNI_B0003 PF02195 ParB-like nuclease domain VIBNI_B0003 PF08775 ParB family VIBNI_B0004 PF13718 GNAT acetyltransferase 2 VIBNI_B0004 PF05127 Helicase VIBNI_B0007 PF00486 Transcriptional regulatory protein, C terminal VIBNI_B0007 PF00072 Response regulator receiver domain VIBNI_B0008 PF01584 CheW-like domain VIBNI_B0008 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_B0008 PF09078 CheY binding VIBNI_B0008 PF02895 Signal transducing histidine kinase, homodimeric domain VIBNI_B0008 PF01627 Hpt domain VIBNI_B0009 PF01584 CheW-like domain VIBNI_B0010 PF01584 CheW-like domain VIBNI_B0011 PF00672 HAMP domain VIBNI_B0011 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBNI_B0011 PF02203 Tar ligand binding domain homologue VIBNI_B0012 PF03705 CheR methyltransferase, all-alpha domain VIBNI_B0012 PF01739 CheR methyltransferase, SAM binding domain VIBNI_B0013 PF03975 CheD chemotactic sensory transduction VIBNI_B0014 PF01339 CheB methylesterase VIBNI_B0014 PF00072 Response regulator receiver domain VIBNI_B0016 PF02743 Cache domain VIBNI_B0016 PF00672 HAMP domain VIBNI_B0016 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBNI_B0018 PF00486 Transcriptional regulatory protein, C terminal VIBNI_B0018 PF00072 Response regulator receiver domain VIBNI_B0021 PF13609 Gram-negative porin VIBNI_B0022 PF12833 Helix-turn-helix domain VIBNI_B0023 PF00107 Zinc-binding dehydrogenase VIBNI_B0023 PF08240 Alcohol dehydrogenase GroES-like domain VIBNI_B0024 PF00005 ABC transporter VIBNI_B0024 PF03412 Peptidase C39 family VIBNI_B0024 PF00664 ABC transporter transmembrane region VIBNI_B0027 PF00529 HlyD membrane-fusion protein of T1SS VIBNI_B0028 PF01243 Pyridoxamine 5'-phosphate oxidase VIBNI_B0028 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region VIBNI_B0031 PF01297 Zinc-uptake complex component A periplasmic VIBNI_B0032 PF00005 ABC transporter VIBNI_B0033 PF00950 ABC 3 transport family VIBNI_B0034 PF00950 ABC 3 transport family VIBNI_B0035 PF03781 Sulfatase-modifying factor enzyme 1 VIBNI_B0037 PF12833 Helix-turn-helix domain VIBNI_B0039 PF18327 Proline utilization A proline dehydrogenase N-terminal domain VIBNI_B0039 PF14850 DNA-binding domain of Proline dehydrogenase VIBNI_B0039 PF01619 Proline dehydrogenase VIBNI_B0039 PF00171 Aldehyde dehydrogenase family VIBNI_B0041 PF00474 Sodium:solute symporter family VIBNI_B0043 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_B0043 PF08448 PAS fold VIBNI_B0044 PF01037 Lrp/AsnC ligand binding domain VIBNI_B0046 PF04898 Glutamate synthase central domain VIBNI_B0046 PF01645 Conserved region in glutamate synthase VIBNI_B0046 PF00310 Glutamine amidotransferases class-II VIBNI_B0046 PF01493 GXGXG motif VIBNI_B0047 PF00175 Oxidoreductase NAD-binding domain VIBNI_B0047 PF00667 FAD binding domain VIBNI_B0047 PF00258 Flavodoxin VIBNI_B0048 PF03466 LysR substrate binding domain VIBNI_B0048 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_B0049 PF12146 Serine aminopeptidase, S33 VIBNI_B0050 PF02798 Glutathione S-transferase, N-terminal domain VIBNI_B0051 PF02525 Flavodoxin-like fold VIBNI_B0052 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_B0052 PF03466 LysR substrate binding domain VIBNI_B0053 PF00657 GDSL-like Lipase/Acylhydrolase VIBNI_B0056 PF02469 Fasciclin domain VIBNI_B0059 PF00376 MerR family regulatory protein VIBNI_B0059 PF09278 MerR, DNA binding VIBNI_B0064 PF13472 GDSL-like Lipase/Acylhydrolase family VIBNI_B0064 PF17996 Carbohydrate esterase 2 N-terminal VIBNI_B0067 PF07690 Major Facilitator Superfamily VIBNI_B0069 PF00881 Nitroreductase family VIBNI_B0070 PF05977 Transmembrane secretion effector VIBNI_B0077 PF00005 ABC transporter VIBNI_B0078 PF01032 FecCD transport family VIBNI_B0080 PF01380 SIS domain VIBNI_B0080 PF01418 Helix-turn-helix domain, rpiR family VIBNI_B0081 PF01380 SIS domain VIBNI_B0082 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_B0084 PF00005 ABC transporter VIBNI_B0084 PF17912 MalK OB fold domain VIBNI_B0085 PF13416 Bacterial extracellular solute-binding protein VIBNI_B0089 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VIBNI_B0089 PF00205 Thiamine pyrophosphate enzyme, central domain VIBNI_B0089 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VIBNI_B0090 PF01593 Flavin containing amine oxidoreductase VIBNI_B0091 PF00089 Trypsin VIBNI_B0099 PF01966 HD domain VIBNI_B0100 PF05552 Conserved TM helix VIBNI_B0100 PF00924 Mechanosensitive ion channel VIBNI_B0101 PF03466 LysR substrate binding domain VIBNI_B0101 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_B0104 PF06628 Catalase-related immune-responsive VIBNI_B0104 PF00199 Catalase VIBNI_B0110 PF00005 ABC transporter VIBNI_B0114 PF01709 Transcriptional regulator VIBNI_B0115 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase VIBNI_B0115 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VIBNI_B0119 PF01810 LysE type translocator VIBNI_B0120 PF08240 Alcohol dehydrogenase GroES-like domain VIBNI_B0120 PF00107 Zinc-binding dehydrogenase VIBNI_B0122 PF00375 Sodium:dicarboxylate symporter family VIBNI_B0124 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_B0124 PF03466 LysR substrate binding domain VIBNI_B0128 PF05025 RbsD / FucU transport protein family VIBNI_B0129 PF00294 pfkB family carbohydrate kinase VIBNI_B0130 PF00356 Bacterial regulatory proteins, lacI family VIBNI_B0134 PF01638 HxlR-like helix-turn-helix VIBNI_B0138 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBNI_B0138 PF08447 PAS fold VIBNI_B0139 PF00667 FAD binding domain VIBNI_B0139 PF00258 Flavodoxin VIBNI_B0139 PF00175 Oxidoreductase NAD-binding domain VIBNI_B0140 PF03109 ABC1 family VIBNI_B0142 PF01928 CYTH domain VIBNI_B0143 PF03466 LysR substrate binding domain VIBNI_B0143 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_B0147 PF00072 Response regulator receiver domain VIBNI_B0147 PF00486 Transcriptional regulatory protein, C terminal VIBNI_B0151 PF12833 Helix-turn-helix domain VIBNI_B0157 PF01810 LysE type translocator VIBNI_B0162 PF10414 Sirohaem synthase dimerisation region VIBNI_B0162 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VIBNI_B0162 PF14824 Sirohaem biosynthesis protein central VIBNI_B0164 PF00591 Glycosyl transferase family, a/b domain VIBNI_B0164 PF02885 Glycosyl transferase family, helical bundle domain VIBNI_B0165 PF00072 Response regulator receiver domain VIBNI_B0165 PF03861 ANTAR domain VIBNI_B0166 PF00005 ABC transporter VIBNI_B0167 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_B0168 PF00005 ABC transporter VIBNI_B0169 PF01077 Nitrite and sulphite reductase 4Fe-4S domain VIBNI_B0169 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain VIBNI_B0169 PF04324 BFD-like [2Fe-2S] binding domain VIBNI_B0169 PF07992 Pyridine nucleotide-disulphide oxidoreductase VIBNI_B0169 PF18267 Rubredoxin NAD+ reductase C-terminal domain VIBNI_B0169 PF13806 Rieske-like [2Fe-2S] domain VIBNI_B0171 PF08447 PAS fold VIBNI_B0171 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBNI_B0172 PF01979 Amidohydrolase family VIBNI_B0173 PF03466 LysR substrate binding domain VIBNI_B0173 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_B0174 PF02668 Taurine catabolism dioxygenase TauD, TfdA family VIBNI_B0175 PF01925 Sulfite exporter TauE/SafE VIBNI_B0176 PF04994 TfoX C-terminal domain VIBNI_B0176 PF04993 TfoX N-terminal domain VIBNI_B0177 PF02586 SOS response associated peptidase (SRAP) VIBNI_B0178 PF06123 Inner membrane protein CreD VIBNI_B0179 PF00672 HAMP domain VIBNI_B0179 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_B0179 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_B0180 PF00072 Response regulator receiver domain VIBNI_B0180 PF00486 Transcriptional regulatory protein, C terminal VIBNI_B0181 PF01925 Sulfite exporter TauE/SafE VIBNI_B0182 PF01515 Phosphate acetyl/butaryl transferase VIBNI_B0183 PF09339 IclR helix-turn-helix domain VIBNI_B0183 PF01614 Bacterial transcriptional regulator VIBNI_B0184 PF07702 UTRA domain VIBNI_B0184 PF00392 Bacterial regulatory proteins, gntR family VIBNI_B0187 PF00403 Heavy-metal-associated domain VIBNI_B0187 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VIBNI_B0187 PF07992 Pyridine nucleotide-disulphide oxidoreductase VIBNI_B0190 PF03477 ATP cone domain VIBNI_B0190 PF02867 Ribonucleotide reductase, barrel domain VIBNI_B0190 PF00317 Ribonucleotide reductase, all-alpha domain VIBNI_B0191 PF00268 Ribonucleotide reductase, small chain VIBNI_B0194 PF01554 MatE VIBNI_B0195 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_B0195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_B0195 PF16527 Two-component sensor protein CpxA, periplasmic domain VIBNI_B0195 PF00672 HAMP domain VIBNI_B0196 PF00072 Response regulator receiver domain VIBNI_B0196 PF00486 Transcriptional regulatory protein, C terminal VIBNI_B0199 PF06445 GyrI-like small molecule binding domain VIBNI_B0199 PF12833 Helix-turn-helix domain VIBNI_B0201 PF03466 LysR substrate binding domain VIBNI_B0201 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_B0205 PF02028 BCCT, betaine/carnitine/choline family transporter VIBNI_B0207 PF00171 Aldehyde dehydrogenase family VIBNI_B0209 PF03466 LysR substrate binding domain VIBNI_B0209 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_B0210 PF01117 Aerolysin toxin VIBNI_B0210 PF03440 Aerolysin/Pertussis toxin (APT) domain VIBNI_B0211 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_B0211 PF03466 LysR substrate binding domain VIBNI_B0212 PF12849 PBP superfamily domain VIBNI_B0213 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_B0214 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_B0215 PF00005 ABC transporter VIBNI_B0217 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VIBNI_B0219 PF03480 Bacterial extracellular solute-binding protein, family 7 VIBNI_B0220 PF16363 GDP-mannose 4,6 dehydratase VIBNI_B0224 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_B0225 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_B0228 PF00005 ABC transporter VIBNI_B0228 PF17912 MalK OB fold domain VIBNI_B0228 PF03459 TOBE domain VIBNI_B0234 PF00356 Bacterial regulatory proteins, lacI family VIBNI_B0237 PF00561 alpha/beta hydrolase fold VIBNI_B0238 PF03737 Aldolase/RraA VIBNI_B0238 PF00180 Isocitrate/isopropylmalate dehydrogenase VIBNI_B0242 PF00529 HlyD membrane-fusion protein of T1SS VIBNI_B0242 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VIBNI_B0243 PF00873 AcrB/AcrD/AcrF family VIBNI_B0245 PF13411 MerR HTH family regulatory protein VIBNI_B0246 PF00106 short chain dehydrogenase VIBNI_B0250 PF07683 Cobalamin synthesis protein cobW C-terminal domain VIBNI_B0250 PF02492 CobW/HypB/UreG, nucleotide-binding domain VIBNI_B0252 PF00775 Dioxygenase VIBNI_B0252 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal VIBNI_B0255 PF09278 MerR, DNA binding VIBNI_B0255 PF00376 MerR family regulatory protein VIBNI_B0256 PF00082 Subtilase family VIBNI_B0258 PF07859 alpha/beta hydrolase fold VIBNI_B0258 PF00331 Glycosyl hydrolase family 10 VIBNI_B0260 PF00072 Response regulator receiver domain VIBNI_B0260 PF00486 Transcriptional regulatory protein, C terminal VIBNI_B0261 PF16736 Single Cache-like VIBNI_B0261 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_B0261 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_B0261 PF00989 PAS fold VIBNI_B0262 PF01758 Sodium Bile acid symporter family VIBNI_B0264 PF04151 Bacterial pre-peptidase C-terminal domain VIBNI_B0264 PF00082 Subtilase family VIBNI_B0264 PF05922 Peptidase inhibitor I9 VIBNI_B0265 PF00975 Thioesterase domain VIBNI_B0265 PF00550 Phosphopantetheine attachment site VIBNI_B0265 PF00668 Condensation domain VIBNI_B0265 PF13193 AMP-binding enzyme C-terminal domain VIBNI_B0265 PF00501 AMP-binding enzyme VIBNI_B0267 PF00892 EamA-like transporter family VIBNI_B0268 PF01406 tRNA synthetases class I (C) catalytic domain VIBNI_B0269 PF00797 N-acetyltransferase VIBNI_B0271 PF04151 Bacterial pre-peptidase C-terminal domain VIBNI_B0271 PF00082 Subtilase family VIBNI_B0272 PF00012 Hsp70 protein VIBNI_B0275 PF01554 MatE VIBNI_B0276 PF12833 Helix-turn-helix domain VIBNI_B0280 PF07732 Multicopper oxidase VIBNI_B0280 PF00394 Multicopper oxidase VIBNI_B0280 PF07731 Multicopper oxidase VIBNI_B0281 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) VIBNI_B0284 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_B0284 PF03466 LysR substrate binding domain VIBNI_B0285 PF01979 Amidohydrolase family VIBNI_B0291 PF00005 ABC transporter VIBNI_B0293 PF01032 FecCD transport family VIBNI_B0295 PF00701 Dihydrodipicolinate synthetase family VIBNI_B0296 PF00392 Bacterial regulatory proteins, gntR family VIBNI_B0296 PF00155 Aminotransferase class I and II VIBNI_B0298 PF00089 Trypsin VIBNI_B0300 PF00356 Bacterial regulatory proteins, lacI family VIBNI_B0301 PF00089 Trypsin VIBNI_B0303 PF00005 ABC transporter VIBNI_B0304 PF02653 Branched-chain amino acid transport system / permease component VIBNI_B0305 PF02126 Phosphotriesterase family VIBNI_B0307 PF07687 Peptidase dimerisation domain VIBNI_B0307 PF01546 Peptidase family M20/M25/M40 VIBNI_B0309 PF00196 Bacterial regulatory proteins, luxR family VIBNI_B0309 PF00072 Response regulator receiver domain VIBNI_B0312 PF08245 Mur ligase middle domain VIBNI_B0312 PF02875 Mur ligase family, glutamate ligase domain VIBNI_B0312 PF01225 Mur ligase family, catalytic domain VIBNI_B0313 PF07730 Histidine kinase VIBNI_B0317 PF07690 Major Facilitator Superfamily VIBNI_B0318 PF00072 Response regulator receiver domain VIBNI_B0319 PF00072 Response regulator receiver domain VIBNI_B0319 PF01627 Hpt domain VIBNI_B0319 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_B0319 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_B0330 PF05593 RHS Repeat VIBNI_B0330 PF03527 RHS protein VIBNI_B0335 PF16671 Actin cross-linking domain VIBNI_B0335 PF04717 Type VI secretion system, phage-baseplate injector VIBNI_B0336 PF05638 Type VI secretion system effector, Hcp VIBNI_B0346 PF10431 C-terminal, D2-small domain, of ClpB protein VIBNI_B0346 PF07724 AAA domain (Cdc48 subfamily) VIBNI_B0346 PF00004 ATPase family associated with various cellular activities (AAA) VIBNI_B0346 PF17871 AAA lid domain VIBNI_B0347 PF02954 Bacterial regulatory protein, Fis family VIBNI_B0347 PF00158 Sigma-54 interaction domain VIBNI_B0347 PF00072 Response regulator receiver domain VIBNI_B0355 PF12792 CSS motif domain associated with EAL VIBNI_B0355 PF00563 EAL domain VIBNI_B0358 PF13419 Haloacid dehalogenase-like hydrolase VIBNI_B0362 PF00089 Trypsin VIBNI_B0368 PF03552 Cellulose synthase VIBNI_B0368 PF07238 PilZ domain VIBNI_B0368 PF00535 Glycosyl transferase family 2 VIBNI_B0370 PF01270 Glycosyl hydrolases family 8 VIBNI_B0376 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_B0376 PF03466 LysR substrate binding domain VIBNI_B0377 PF07690 Major Facilitator Superfamily VIBNI_B0380 PF00313 'Cold-shock' DNA-binding domain VIBNI_B0382 PF12833 Helix-turn-helix domain VIBNI_B0382 PF02311 AraC-like ligand binding domain VIBNI_B0388 PF00857 Isochorismatase family VIBNI_B0389 PF12833 Helix-turn-helix domain VIBNI_B0391 PF00583 Acetyltransferase (GNAT) family VIBNI_B0392 PF13673 Acetyltransferase (GNAT) domain VIBNI_B0394 PF00999 Sodium/hydrogen exchanger family VIBNI_B0394 PF02254 TrkA-N domain VIBNI_B0395 PF02525 Flavodoxin-like fold VIBNI_B0396 PF13599 Pentapeptide repeats (9 copies) VIBNI_B0398 PF04962 KduI/IolB family VIBNI_B0399 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VIBNI_B0401 PF03480 Bacterial extracellular solute-binding protein, family 7 VIBNI_B0403 PF00392 Bacterial regulatory proteins, gntR family VIBNI_B0403 PF07729 FCD domain VIBNI_B0412 PF00107 Zinc-binding dehydrogenase VIBNI_B0412 PF08240 Alcohol dehydrogenase GroES-like domain VIBNI_B0413 PF08402 TOBE domain VIBNI_B0413 PF00005 ABC transporter VIBNI_B0414 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_B0415 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_B0418 PF00248 Aldo/keto reductase family VIBNI_B0419 PF00107 Zinc-binding dehydrogenase VIBNI_B0419 PF08240 Alcohol dehydrogenase GroES-like domain VIBNI_B0420 PF00440 Bacterial regulatory proteins, tetR family VIBNI_B0420 PF17938 Tetracyclin repressor-like, C-terminal domain VIBNI_B0421 PF00732 GMC oxidoreductase VIBNI_B0421 PF05199 GMC oxidoreductase VIBNI_B0422 PF01144 Coenzyme A transferase VIBNI_B0430 PF08450 SMP-30/Gluconolactonase/LRE-like region VIBNI_B0433 PF01370 NAD dependent epimerase/dehydratase family VIBNI_B0435 PF03737 Aldolase/RraA VIBNI_B0437 PF01842 ACT domain VIBNI_B0437 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VIBNI_B0437 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VIBNI_B0440 PF07729 FCD domain VIBNI_B0440 PF00392 Bacterial regulatory proteins, gntR family VIBNI_B0441 PF05199 GMC oxidoreductase VIBNI_B0441 PF00732 GMC oxidoreductase VIBNI_B0444 PF00005 ABC transporter VIBNI_B0445 PF02653 Branched-chain amino acid transport system / permease component VIBNI_B0452 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VIBNI_B0452 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VIBNI_B0452 PF02770 Acyl-CoA dehydrogenase, middle domain VIBNI_B0454 PF01012 Electron transfer flavoprotein domain VIBNI_B0455 PF00766 Electron transfer flavoprotein FAD-binding domain VIBNI_B0455 PF01012 Electron transfer flavoprotein domain VIBNI_B0456 PF13407 Periplasmic binding protein domain VIBNI_B0457 PF02653 Branched-chain amino acid transport system / permease component VIBNI_B0458 PF00005 ABC transporter VIBNI_B0459 PF02653 Branched-chain amino acid transport system / permease component VIBNI_B0460 PF13411 MerR HTH family regulatory protein VIBNI_B0463 PF01144 Coenzyme A transferase VIBNI_B0464 PF01144 Coenzyme A transferase VIBNI_B0465 PF00108 Thiolase, N-terminal domain VIBNI_B0465 PF02803 Thiolase, C-terminal domain VIBNI_B0466 PF06224 Winged helix DNA-binding domain VIBNI_B0470 PF02798 Glutathione S-transferase, N-terminal domain VIBNI_B0470 PF14497 Glutathione S-transferase, C-terminal domain VIBNI_B0472 PF04209 homogentisate 1,2-dioxygenase VIBNI_B0476 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VIBNI_B0477 PF01047 MarR family VIBNI_B0479 PF00497 Bacterial extracellular solute-binding proteins, family 3 VIBNI_B0480 PF00970 Oxidoreductase FAD-binding domain VIBNI_B0480 PF00175 Oxidoreductase NAD-binding domain VIBNI_B0482 PF00027 Cyclic nucleotide-binding domain VIBNI_B0482 PF13545 Crp-like helix-turn-helix domain VIBNI_B0486 PF01032 FecCD transport family VIBNI_B0487 PF00005 ABC transporter VIBNI_B0488 PF03059 Nicotianamine synthase protein VIBNI_B0489 PF10100 Staphylopine dehydrogenase VIBNI_B0490 PF00892 EamA-like transporter family VIBNI_B0492 PF01872 RibD C-terminal domain VIBNI_B0492 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VIBNI_B0494 PF00557 Metallopeptidase family M24 VIBNI_B0495 PF10928 Protein of unknown function (DUF2810) VIBNI_B0496 PF00072 Response regulator receiver domain VIBNI_B0496 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VIBNI_B0496 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_B0496 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_B0496 PF01627 Hpt domain VIBNI_B0496 PF00672 HAMP domain VIBNI_B0498 PF00072 Response regulator receiver domain VIBNI_B0500 PF01810 LysE type translocator VIBNI_B0501 PF13419 Haloacid dehalogenase-like hydrolase VIBNI_B0503 PF00291 Pyridoxal-phosphate dependent enzyme VIBNI_B0507 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_B0507 PF03466 LysR substrate binding domain VIBNI_B0509 PF14497 Glutathione S-transferase, C-terminal domain VIBNI_B0509 PF02798 Glutathione S-transferase, N-terminal domain VIBNI_B0510 PF03466 LysR substrate binding domain VIBNI_B0510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_B0514 PF00300 Histidine phosphatase superfamily (branch 1) VIBNI_B0515 PF03186 CobD/Cbib protein VIBNI_B0516 PF00155 Aminotransferase class I and II VIBNI_B0517 PF00271 Helicase conserved C-terminal domain VIBNI_B0517 PF00270 DEAD/DEAH box helicase VIBNI_B0518 PF03466 LysR substrate binding domain VIBNI_B0518 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_B0519 PF03972 MmgE/PrpD family VIBNI_B0523 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase VIBNI_B0524 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_B0525 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_B0526 PF00005 ABC transporter VIBNI_B0526 PF17912 MalK OB fold domain VIBNI_B0527 PF00480 ROK family VIBNI_B0529 PF02894 Oxidoreductase family, C-terminal alpha/beta domain VIBNI_B0529 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VIBNI_B0530 PF01547 Bacterial extracellular solute-binding protein VIBNI_B0531 PF00480 ROK family VIBNI_B0533 PF08534 Redoxin VIBNI_B0538 PF01645 Conserved region in glutamate synthase VIBNI_B0539 PF01042 Endoribonuclease L-PSP VIBNI_B0541 PF09905 DNA-binding protein VF530 VIBNI_B0546 PF04244 Deoxyribodipyrimidine photo-lyase-related protein VIBNI_B0555 PF00583 Acetyltransferase (GNAT) family VIBNI_B0566 PF07687 Peptidase dimerisation domain VIBNI_B0566 PF01546 Peptidase family M20/M25/M40 VIBNI_B0568 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VIBNI_B0569 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_B0570 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VIBNI_B0570 PF00005 ABC transporter VIBNI_B0571 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VIBNI_B0571 PF00005 ABC transporter VIBNI_B0573 PF00563 EAL domain VIBNI_B0573 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_B0573 PF03707 Bacterial signalling protein N terminal repeat VIBNI_B0575 PF00199 Catalase VIBNI_B0575 PF06628 Catalase-related immune-responsive VIBNI_B0576 PF00356 Bacterial regulatory proteins, lacI family VIBNI_B0577 PF01547 Bacterial extracellular solute-binding protein VIBNI_B0578 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_B0580 PF08402 TOBE domain VIBNI_B0580 PF00005 ABC transporter VIBNI_B0581 PF00149 Calcineurin-like phosphoesterase VIBNI_B0582 PF00732 GMC oxidoreductase VIBNI_B0582 PF05199 GMC oxidoreductase VIBNI_B0584 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VIBNI_B0586 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VIBNI_B0588 PF12464 Maltose acetyltransferase VIBNI_B0588 PF14602 Hexapeptide repeat of succinyl-transferase VIBNI_B0590 PF05726 Pirin C-terminal cupin domain VIBNI_B0590 PF02678 Pirin VIBNI_B0592 PF00881 Nitroreductase family VIBNI_B0593 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_B0593 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_B0593 PF02743 Cache domain VIBNI_B0594 PF02492 CobW/HypB/UreG, nucleotide-binding domain VIBNI_B0595 PF01730 UreF VIBNI_B0597 PF05194 UreE urease accessory protein, C-terminal domain VIBNI_B0597 PF02814 UreE urease accessory protein, N-terminal domain VIBNI_B0598 PF01979 Amidohydrolase family VIBNI_B0598 PF00449 Urease alpha-subunit, N-terminal domain VIBNI_B0599 PF00699 Urease beta subunit VIBNI_B0599 PF00547 Urease, gamma subunit VIBNI_B0600 PF01774 UreD urease accessory protein VIBNI_B0601 PF00005 ABC transporter VIBNI_B0602 PF00005 ABC transporter VIBNI_B0602 PF12399 Branched-chain amino acid ATP-binding cassette transporter VIBNI_B0604 PF02653 Branched-chain amino acid transport system / permease component VIBNI_B0610 PF13193 AMP-binding enzyme C-terminal domain VIBNI_B0610 PF00550 Phosphopantetheine attachment site VIBNI_B0610 PF00668 Condensation domain VIBNI_B0610 PF00501 AMP-binding enzyme VIBNI_B0611 PF07715 TonB-dependent Receptor Plug Domain VIBNI_B0613 PF13193 AMP-binding enzyme C-terminal domain VIBNI_B0613 PF00501 AMP-binding enzyme VIBNI_B0615 PF00550 Phosphopantetheine attachment site VIBNI_B0615 PF00857 Isochorismatase family VIBNI_B0616 PF04954 Siderophore-interacting protein VIBNI_B0616 PF08021 Siderophore-interacting FAD-binding domain VIBNI_B0617 PF13193 AMP-binding enzyme C-terminal domain VIBNI_B0617 PF00501 AMP-binding enzyme VIBNI_B0618 PF00425 chorismate binding enzyme VIBNI_B0620 PF00793 DAHP synthetase I family VIBNI_B0623 PF00550 Phosphopantetheine attachment site VIBNI_B0623 PF13193 AMP-binding enzyme C-terminal domain VIBNI_B0623 PF00501 AMP-binding enzyme VIBNI_B0623 PF00668 Condensation domain VIBNI_B0624 PF00550 Phosphopantetheine attachment site VIBNI_B0624 PF00501 AMP-binding enzyme VIBNI_B0624 PF00975 Thioesterase domain VIBNI_B0624 PF00668 Condensation domain VIBNI_B0624 PF13193 AMP-binding enzyme C-terminal domain VIBNI_B0626 PF01497 Periplasmic binding protein VIBNI_B0627 PF01032 FecCD transport family VIBNI_B0628 PF01032 FecCD transport family VIBNI_B0629 PF07993 Male sterility protein VIBNI_B0629 PF00550 Phosphopantetheine attachment site VIBNI_B0629 PF00501 AMP-binding enzyme VIBNI_B0629 PF13193 AMP-binding enzyme C-terminal domain VIBNI_B0629 PF00668 Condensation domain VIBNI_B0629 PF07993 Male sterility protein VIBNI_B0629 PF00550 Phosphopantetheine attachment site VIBNI_B0629 PF00668 Condensation domain VIBNI_B0629 PF00501 AMP-binding enzyme VIBNI_B0629 PF13193 AMP-binding enzyme C-terminal domain VIBNI_B0630 PF00005 ABC transporter VIBNI_B0631 PF01648 4'-phosphopantetheinyl transferase superfamily VIBNI_B0631 PF17837 4'-phosphopantetheinyl transferase N-terminal domain VIBNI_B0632 PF01734 Patatin-like phospholipase VIBNI_B0633 PF00583 Acetyltransferase (GNAT) family VIBNI_B0639 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_B0640 PF00005 ABC transporter VIBNI_B0640 PF00571 CBS domain VIBNI_B0641 PF03707 Bacterial signalling protein N terminal repeat VIBNI_B0641 PF00563 EAL domain VIBNI_B0641 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_B0643 PF02668 Taurine catabolism dioxygenase TauD, TfdA family VIBNI_B0644 PF01810 LysE type translocator VIBNI_B0645 PF01738 Dienelactone hydrolase family VIBNI_B0646 PF00583 Acetyltransferase (GNAT) family VIBNI_B0647 PF04962 KduI/IolB family VIBNI_B0648 PF01740 STAS domain VIBNI_B0648 PF00916 Sulfate permease family VIBNI_B0649 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain VIBNI_B0649 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain VIBNI_B0651 PF03061 Thioesterase superfamily VIBNI_B0655 PF00005 ABC transporter VIBNI_B0656 PF02653 Branched-chain amino acid transport system / permease component VIBNI_B0658 PF13378 Enolase C-terminal domain-like VIBNI_B0658 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain VIBNI_B0659 PF07729 FCD domain VIBNI_B0659 PF00392 Bacterial regulatory proteins, gntR family VIBNI_B0669 PF12833 Helix-turn-helix domain VIBNI_B0670 PF18389 TrmO C-terminal domain VIBNI_B0670 PF01980 tRNA-methyltransferase O VIBNI_B0671 PF00583 Acetyltransferase (GNAT) family VIBNI_B0671 PF14268 YoaP-like VIBNI_B0674 PF07470 Glycosyl Hydrolase Family 88 VIBNI_B0675 PF09508 Lacto-N-biose phosphorylase N-terminal TIM barrel domain VIBNI_B0675 PF17386 Lacto-N-biose phosphorylase C-terminal domain VIBNI_B0675 PF17385 Lacto-N-biose phosphorylase central domain VIBNI_B0676 PF02278 Polysaccharide lyase family 8, super-sandwich domain VIBNI_B0676 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain VIBNI_B0676 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain VIBNI_B0677 PF00728 Glycosyl hydrolase family 20, catalytic domain VIBNI_B0677 PF03173 Putative carbohydrate binding domain VIBNI_B0677 PF02838 Glycosyl hydrolase family 20, domain 2 VIBNI_B0677 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain VIBNI_B0679 PF06483 Chitinase C VIBNI_B0679 PF00704 Glycosyl hydrolases family 18 VIBNI_B0682 PF13629 Pilus formation protein N terminal region VIBNI_B0682 PF00263 Bacterial type II and III secretion system protein VIBNI_B0682 PF04972 BON domain VIBNI_B0685 PF00437 Type II/IV secretion system protein VIBNI_B0692 PF00691 OmpA family VIBNI_B0694 PF01470 Pyroglutamyl peptidase VIBNI_B0695 PF13193 AMP-binding enzyme C-terminal domain VIBNI_B0695 PF00550 Phosphopantetheine attachment site VIBNI_B0695 PF00501 AMP-binding enzyme VIBNI_B0695 PF18563 TubC N-terminal docking domain VIBNI_B0695 PF00668 Condensation domain VIBNI_B0697 PF00375 Sodium:dicarboxylate symporter family VIBNI_B0700 PF16385 Domain of unknown function VIBNI_B0700 PF00884 Sulfatase VIBNI_B0701 PF00884 Sulfatase VIBNI_B0703 PF13186 Iron-sulfur cluster-binding domain VIBNI_B0703 PF04055 Radical SAM superfamily VIBNI_B0707 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_B0707 PF00072 Response regulator receiver domain VIBNI_B0709 PF16326 ABC transporter C-terminal domain VIBNI_B0709 PF00005 ABC transporter VIBNI_B0709 PF12848 ABC transporter VIBNI_B0713 PF02567 Phenazine biosynthesis-like protein VIBNI_B0714 PF00107 Zinc-binding dehydrogenase VIBNI_B0714 PF00550 Phosphopantetheine attachment site VIBNI_B0714 PF00109 Beta-ketoacyl synthase, N-terminal domain VIBNI_B0714 PF00698 Acyl transferase domain VIBNI_B0714 PF14765 Polyketide synthase dehydratase VIBNI_B0714 PF08659 KR domain VIBNI_B0714 PF02801 Beta-ketoacyl synthase, C-terminal domain VIBNI_B0714 PF16197 Ketoacyl-synthetase C-terminal extension VIBNI_B0714 PF08240 Alcohol dehydrogenase GroES-like domain VIBNI_B0715 PF01261 Xylose isomerase-like TIM barrel VIBNI_B0716 PF00596 Class II Aldolase and Adducin N-terminal domain VIBNI_B0717 PF00107 Zinc-binding dehydrogenase VIBNI_B0717 PF08240 Alcohol dehydrogenase GroES-like domain VIBNI_B0718 PF13407 Periplasmic binding protein domain VIBNI_B0718 PF00356 Bacterial regulatory proteins, lacI family VIBNI_B0720 PF13407 Periplasmic binding protein domain VIBNI_B0721 PF00005 ABC transporter VIBNI_B0722 PF02653 Branched-chain amino acid transport system / permease component VIBNI_B0723 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VIBNI_B0723 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VIBNI_B0741 PF09905 DNA-binding protein VF530 VIBNI_B0745 PF00202 Aminotransferase class-III VIBNI_B0746 PF00171 Aldehyde dehydrogenase family VIBNI_B0747 PF02626 Carboxyltransferase domain, subdomain A and B VIBNI_B0749 PF00289 Biotin carboxylase, N-terminal domain VIBNI_B0749 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VIBNI_B0749 PF02785 Biotin carboxylase C-terminal domain VIBNI_B0750 PF00364 Biotin-requiring enzyme VIBNI_B0751 PF03746 LamB/YcsF family VIBNI_B0752 PF02653 Branched-chain amino acid transport system / permease component VIBNI_B0753 PF00005 ABC transporter VIBNI_B0754 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VIBNI_B0755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_B0755 PF03466 LysR substrate binding domain VIBNI_B0756 PF03618 Kinase/pyrophosphorylase VIBNI_B0757 PF00391 PEP-utilising enzyme, mobile domain VIBNI_B0757 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain VIBNI_B0757 PF02896 PEP-utilising enzyme, TIM barrel domain VIBNI_B0758 PF00392 Bacterial regulatory proteins, gntR family VIBNI_B0758 PF07729 FCD domain VIBNI_B0763 PF02653 Branched-chain amino acid transport system / permease component VIBNI_B0764 PF00005 ABC transporter VIBNI_B0765 PF13378 Enolase C-terminal domain-like VIBNI_B0765 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain VIBNI_B0768 PF00171 Aldehyde dehydrogenase family VIBNI_B0772 PF12558 ATP-binding cassette cobalt transporter VIBNI_B0772 PF00005 ABC transporter VIBNI_B0775 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VIBNI_B0776 PF13419 Haloacid dehalogenase-like hydrolase VIBNI_B0779 PF00440 Bacterial regulatory proteins, tetR family VIBNI_B0779 PF08360 QacR-like protein, C-terminal region VIBNI_B0781 PF03352 Methyladenine glycosylase VIBNI_B0789 PF01810 LysE type translocator VIBNI_B0790 PF07681 DoxX VIBNI_B0794 PF07237 Protein of unknown function (DUF1428) VIBNI_B0798 PF01070 FMN-dependent dehydrogenase VIBNI_B0799 PF02652 L-lactate permease VIBNI_B0800 PF17676 LD-carboxypeptidase C-terminal domain VIBNI_B0800 PF02016 LD-carboxypeptidase N-terminal domain VIBNI_B0801 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_B0801 PF03466 LysR substrate binding domain VIBNI_B0802 PF00107 Zinc-binding dehydrogenase VIBNI_B0802 PF16884 N-terminal domain of oxidoreductase VIBNI_B0803 PF11806 Domain of unknown function (DUF3327) VIBNI_B0803 PF00756 Putative esterase VIBNI_B0804 PF00593 TonB dependent receptor VIBNI_B0804 PF07715 TonB-dependent Receptor Plug Domain VIBNI_B0807 PF07676 WD40-like Beta Propeller Repeat VIBNI_B0807 PF00326 Prolyl oligopeptidase family VIBNI_B0808 PF03264 NapC/NirT cytochrome c family, N-terminal region VIBNI_B0809 PF00384 Molybdopterin oxidoreductase VIBNI_B0809 PF18364 Molybdopterin oxidoreductase N-terminal domain VIBNI_B0809 PF01568 Molydopterin dinucleotide binding domain VIBNI_B0811 PF17932 Tetracyclin repressor-like, C-terminal domain VIBNI_B0811 PF00440 Bacterial regulatory proteins, tetR family VIBNI_B0814 PF02347 Glycine cleavage system P-protein VIBNI_B0816 PF00464 Serine hydroxymethyltransferase VIBNI_B0818 PF08669 Glycine cleavage T-protein C-terminal barrel domain VIBNI_B0818 PF01571 Aminomethyltransferase folate-binding domain VIBNI_B0822 PF00089 Trypsin VIBNI_B0823 PF02378 Phosphotransferase system, EIIC VIBNI_B0823 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VIBNI_B0824 PF00294 pfkB family carbohydrate kinase VIBNI_B0825 PF00381 PTS HPr component phosphorylation site VIBNI_B0825 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VIBNI_B0826 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VIBNI_B0826 PF00356 Bacterial regulatory proteins, lacI family VIBNI_B0830 PF02203 Tar ligand binding domain homologue VIBNI_B0830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBNI_B0830 PF00672 HAMP domain VIBNI_B0831 PF01266 FAD dependent oxidoreductase VIBNI_B0832 PF11756 Nitrous oxide-stimulated promoter VIBNI_B0835 PF08279 HTH domain VIBNI_B0835 PF13280 WYL domain VIBNI_B0839 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_B0839 PF17158 Membrane-associated sensor, integral membrane domain VIBNI_B0843 PF01970 Tripartite tricarboxylate transporter TctA family VIBNI_B0845 PF03401 Tripartite tricarboxylate transporter family receptor VIBNI_B0846 PF16347 Domain of unknown function (DUF4976) VIBNI_B0846 PF00884 Sulfatase VIBNI_B0847 PF03466 LysR substrate binding domain VIBNI_B0847 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_B0850 PF03473 MOSC domain VIBNI_B0850 PF00111 2Fe-2S iron-sulfur cluster binding domain VIBNI_B0850 PF00111 2Fe-2S iron-sulfur cluster binding domain VIBNI_B0850 PF03476 MOSC N-terminal beta barrel domain VIBNI_B0850 PF03473 MOSC domain VIBNI_B0850 PF03476 MOSC N-terminal beta barrel domain VIBNI_B0851 PF02540 NAD synthase VIBNI_B0852 PF01467 Cytidylyltransferase-like VIBNI_B0861 PF00465 Iron-containing alcohol dehydrogenase VIBNI_B0862 PF00072 Response regulator receiver domain VIBNI_B0862 PF01584 CheW-like domain VIBNI_B0864 PF02872 5'-nucleotidase, C-terminal domain VIBNI_B0864 PF00149 Calcineurin-like phosphoesterase VIBNI_B0865 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VIBNI_B0867 PF03480 Bacterial extracellular solute-binding protein, family 7 VIBNI_B0869 PF00072 Response regulator receiver domain VIBNI_B0869 PF09308 LuxQ, periplasmic VIBNI_B0869 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_B0869 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_B0873 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_B0874 PF08402 TOBE domain VIBNI_B0874 PF00005 ABC transporter VIBNI_B0875 PF03009 Glycerophosphoryl diester phosphodiesterase family VIBNI_B0876 PF00480 ROK family VIBNI_B0881 PF01032 FecCD transport family VIBNI_B0882 PF01032 FecCD transport family VIBNI_B0883 PF00005 ABC transporter VIBNI_B0884 PF08021 Siderophore-interacting FAD-binding domain VIBNI_B0884 PF04954 Siderophore-interacting protein VIBNI_B0885 PF00072 Response regulator receiver domain VIBNI_B0885 PF00486 Transcriptional regulatory protein, C terminal VIBNI_B0886 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_B0886 PF16527 Two-component sensor protein CpxA, periplasmic domain VIBNI_B0886 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_B0886 PF00672 HAMP domain VIBNI_B0888 PF01497 Periplasmic binding protein VIBNI_B0889 PF12464 Maltose acetyltransferase VIBNI_B0889 PF14602 Hexapeptide repeat of succinyl-transferase VIBNI_B0892 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_B0892 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_B0893 PF02954 Bacterial regulatory protein, Fis family VIBNI_B0893 PF00158 Sigma-54 interaction domain VIBNI_B0893 PF00072 Response regulator receiver domain VIBNI_B0894 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_B0894 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_B0896 PF07690 Major Facilitator Superfamily VIBNI_B0899 PF00462 Glutaredoxin VIBNI_B0900 PF12833 Helix-turn-helix domain VIBNI_B0900 PF12852 Cupin VIBNI_B0901 PF00294 pfkB family carbohydrate kinase VIBNI_B0904 PF11849 Domain of unknown function (DUF3369) VIBNI_B0905 PF13419 Haloacid dehalogenase-like hydrolase VIBNI_B0907 PF03222 Tryptophan/tyrosine permease family VIBNI_B0909 PF04336 Acyl carrier protein phosphodiesterase VIBNI_B0910 PF00270 DEAD/DEAH box helicase VIBNI_B0910 PF00271 Helicase conserved C-terminal domain VIBNI_B0913 PF01212 Beta-eliminating lyase VIBNI_B0915 PF07728 AAA domain (dynein-related subfamily) VIBNI_B0915 PF17868 AAA lid domain VIBNI_B0915 PF12592 Protein of unknown function (DUF3763) VIBNI_B0916 PF05762 VWA domain containing CoxE-like protein VIBNI_B0919 PF00128 Alpha amylase, catalytic domain VIBNI_B0920 PF00392 Bacterial regulatory proteins, gntR family VIBNI_B0920 PF00155 Aminotransferase class I and II VIBNI_B0921 PF01654 Cytochrome bd terminal oxidase subunit I VIBNI_B0922 PF02322 Cytochrome bd terminal oxidase subunit II VIBNI_B0923 PF03707 Bacterial signalling protein N terminal repeat VIBNI_B0923 PF00563 EAL domain VIBNI_B0923 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_B0927 PF12843 Putative quorum-sensing-regulated virulence factor VIBNI_B0930 PF01554 MatE VIBNI_B0931 PF01980 tRNA-methyltransferase O VIBNI_B0933 PF08453 Peptidase family M9 N-terminal VIBNI_B0933 PF04151 Bacterial pre-peptidase C-terminal domain VIBNI_B0933 PF01752 Collagenase VIBNI_B0937 PF00270 DEAD/DEAH box helicase VIBNI_B0937 PF00271 Helicase conserved C-terminal domain VIBNI_B0940 PF02805 Metal binding domain of Ada VIBNI_B0940 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain VIBNI_B0940 PF12833 Helix-turn-helix domain VIBNI_B0940 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain VIBNI_B0941 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain VIBNI_B0941 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain VIBNI_B0942 PF00753 Metallo-beta-lactamase superfamily VIBNI_B0942 PF16123 Hydroxyacylglutathione hydrolase C-terminus VIBNI_B0943 PF13302 Acetyltransferase (GNAT) domain VIBNI_B0947 PF00849 RNA pseudouridylate synthase VIBNI_B0955 PF01638 HxlR-like helix-turn-helix VIBNI_B0959 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_B0960 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_B0961 PF00005 ABC transporter VIBNI_B0962 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VIBNI_B0962 PF00356 Bacterial regulatory proteins, lacI family VIBNI_B0963 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain VIBNI_B0963 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VIBNI_B0964 PF01202 Shikimate kinase VIBNI_B0965 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VIBNI_B0967 PF03480 Bacterial extracellular solute-binding protein, family 7 VIBNI_B0968 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_B0968 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_B0968 PF00497 Bacterial extracellular solute-binding proteins, family 3 VIBNI_B0971 PF05661 Protein of unknown function (DUF808) VIBNI_B0972 PF00392 Bacterial regulatory proteins, gntR family VIBNI_B0972 PF07729 FCD domain VIBNI_B0973 PF13407 Periplasmic binding protein domain VIBNI_B0974 PF00005 ABC transporter VIBNI_B0975 PF02653 Branched-chain amino acid transport system / permease component VIBNI_B0977 PF00171 Aldehyde dehydrogenase family VIBNI_B0978 PF05035 2-keto-3-deoxy-galactonokinase VIBNI_B0979 PF01081 KDPG and KHG aldolase VIBNI_B0980 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain VIBNI_B0980 PF13378 Enolase C-terminal domain-like VIBNI_B0982 PF00206 Lyase VIBNI_B0982 PF10415 Fumarase C C-terminus VIBNI_B0988 PF00550 Phosphopantetheine attachment site VIBNI_B0988 PF00668 Condensation domain VIBNI_B0988 PF00501 AMP-binding enzyme VIBNI_B0988 PF13193 AMP-binding enzyme C-terminal domain VIBNI_B0990 PF01554 MatE VIBNI_B0992 PF01116 Fructose-bisphosphate aldolase class-II VIBNI_B0993 PF08013 Tagatose 6 phosphate kinase VIBNI_B0995 PF13407 Periplasmic binding protein domain VIBNI_B0996 PF00005 ABC transporter VIBNI_B0997 PF02653 Branched-chain amino acid transport system / permease component VIBNI_B0998 PF00294 pfkB family carbohydrate kinase VIBNI_B0999 PF08220 DeoR-like helix-turn-helix domain VIBNI_B0999 PF00455 DeoR C terminal sensor domain VIBNI_B1000 PF00563 EAL domain VIBNI_B1000 PF08447 PAS fold VIBNI_B1000 PF08448 PAS fold VIBNI_B1000 PF13426 PAS domain VIBNI_B1000 PF05231 MASE1 VIBNI_B1000 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_B1001 PF01965 DJ-1/PfpI family VIBNI_B1002 PF07690 Major Facilitator Superfamily VIBNI_B1004 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_B1004 PF05230 MASE2 domain VIBNI_B1007 PF13609 Gram-negative porin VIBNI_B1009 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_B1010 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_B1011 PF13416 Bacterial extracellular solute-binding protein VIBNI_B1012 PF00005 ABC transporter VIBNI_B1012 PF17912 MalK OB fold domain VIBNI_B1013 PF00455 DeoR C terminal sensor domain VIBNI_B1013 PF08220 DeoR-like helix-turn-helix domain VIBNI_B1015 PF02779 Transketolase, pyrimidine binding domain VIBNI_B1015 PF02780 Transketolase, C-terminal domain VIBNI_B1015 PF00456 Transketolase, thiamine diphosphate binding domain VIBNI_B1016 PF00923 Transaldolase/Fructose-6-phosphate aldolase VIBNI_B1018 PF00563 EAL domain VIBNI_B1018 PF03707 Bacterial signalling protein N terminal repeat VIBNI_B1018 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_B1020 PF00581 Rhodanese-like domain VIBNI_B1021 PF03466 LysR substrate binding domain VIBNI_B1021 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_B1025 PF00899 ThiF family VIBNI_B1026 PF03454 MoeA C-terminal region (domain IV) VIBNI_B1026 PF03453 MoeA N-terminal region (domain I and II) VIBNI_B1026 PF00994 Probable molybdopterin binding domain VIBNI_B1027 PF01227 GTP cyclohydrolase I VIBNI_B1028 PF12729 Four helix bundle sensory module for signal transduction VIBNI_B1028 PF00672 HAMP domain VIBNI_B1028 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBNI_B1029 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VIBNI_B1029 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VIBNI_B1031 PF00691 OmpA family VIBNI_B1032 PF01268 Formate--tetrahydrofolate ligase VIBNI_B1033 PF00924 Mechanosensitive ion channel VIBNI_B1035 PF02566 OsmC-like protein VIBNI_B1037 PF03891 Domain of unknown function (DUF333) VIBNI_B1040 PF00909 Ammonium Transporter Family VIBNI_B1040 PF00672 HAMP domain VIBNI_B1060 PF00145 C-5 cytosine-specific DNA methylase VIBNI_B1063 PF01575 MaoC like domain VIBNI_B1064 PF03466 LysR substrate binding domain VIBNI_B1064 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_B1066 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_B1067 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_B1070 PF03459 TOBE domain VIBNI_B1070 PF17912 MalK OB fold domain VIBNI_B1070 PF00005 ABC transporter VIBNI_B1073 PF01740 STAS domain VIBNI_B1073 PF00916 Sulfate permease family VIBNI_B1075 PF12833 Helix-turn-helix domain VIBNI_B1076 PF00575 S1 RNA binding domain VIBNI_B1076 PF00773 RNB domain VIBNI_B1076 PF08206 Ribonuclease B OB domain VIBNI_B1078 PF03880 DbpA RNA binding domain VIBNI_B1078 PF00271 Helicase conserved C-terminal domain VIBNI_B1078 PF00270 DEAD/DEAH box helicase VIBNI_B1080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_B1080 PF03466 LysR substrate binding domain VIBNI_B1082 PF00672 HAMP domain VIBNI_B1082 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBNI_B1082 PF17200 Single Cache domain 2 VIBNI_B1084 PF03831 PhnA domain VIBNI_B1084 PF08274 PhnA Zinc-Ribbon VIBNI_B1085 PF12262 Bacterial virulence factor lipase N-terminal VIBNI_B1086 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VIBNI_B1089 PF03061 Thioesterase superfamily VIBNI_B1091 PF12793 Sugar transport-related sRNA regulator N-term VIBNI_B1091 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VIBNI_B1092 PF00892 EamA-like transporter family VIBNI_B1096 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VIBNI_B1097 PF00005 ABC transporter VIBNI_B1097 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VIBNI_B1098 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VIBNI_B1098 PF00005 ABC transporter VIBNI_B1099 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_B1100 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_B1100 PF12911 N-terminal TM domain of oligopeptide transport permease C VIBNI_B1103 PF01556 DnaJ C terminal domain VIBNI_B1103 PF00684 DnaJ central domain VIBNI_B1103 PF00226 DnaJ domain VIBNI_B1109 PF07690 Major Facilitator Superfamily VIBNI_B1110 PF00085 Thioredoxin VIBNI_B1111 PF14532 Sigma-54 interaction domain VIBNI_B1111 PF02954 Bacterial regulatory protein, Fis family VIBNI_B1111 PF00072 Response regulator receiver domain VIBNI_B1112 PF02743 Cache domain VIBNI_B1112 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_B1112 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_B1115 PF07690 Major Facilitator Superfamily VIBNI_B1116 PF00224 Pyruvate kinase, barrel domain VIBNI_B1116 PF02887 Pyruvate kinase, alpha/beta domain VIBNI_B1117 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VIBNI_B1117 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VIBNI_B1118 PF00294 pfkB family carbohydrate kinase VIBNI_B1121 PF00873 AcrB/AcrD/AcrF family VIBNI_B1122 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VIBNI_B1123 PF02626 Carboxyltransferase domain, subdomain A and B VIBNI_B1125 PF03746 LamB/YcsF family VIBNI_B1126 PF16363 GDP-mannose 4,6 dehydratase VIBNI_B1128 PF00593 TonB dependent receptor VIBNI_B1128 PF04886 PT repeat VIBNI_B1128 PF07715 TonB-dependent Receptor Plug Domain VIBNI_B1129 PF03466 LysR substrate binding domain VIBNI_B1129 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_B1130 PF00583 Acetyltransferase (GNAT) family VIBNI_B1130 PF13607 Succinyl-CoA ligase like flavodoxin domain VIBNI_B1130 PF13380 CoA binding domain VIBNI_B1132 PF05036 Sporulation related domain VIBNI_B1137 PF01253 Translation initiation factor SUI1 VIBNI_B1140 PF03701 Uncharacterised protein family (UPF0181) VIBNI_B1143 PF00486 Transcriptional regulatory protein, C terminal VIBNI_B1143 PF00072 Response regulator receiver domain VIBNI_B1144 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_B1144 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_B1145 PF02233 NAD(P) transhydrogenase beta subunit VIBNI_B1146 PF05222 Alanine dehydrogenase/PNT, N-terminal domain VIBNI_B1146 PF01262 Alanine dehydrogenase/PNT, C-terminal domain VIBNI_B1146 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch VIBNI_B1151 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_B1151 PF00072 Response regulator receiver domain VIBNI_B1152 PF00313 'Cold-shock' DNA-binding domain VIBNI_B1153 PF02696 Uncharacterized ACR, YdiU/UPF0061 family VIBNI_B1154 PF00563 EAL domain VIBNI_B1154 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_B1154 PF01590 GAF domain VIBNI_B1154 PF00360 Phytochrome region VIBNI_B1156 PF00691 OmpA family VIBNI_B1156 PF01389 OmpA-like transmembrane domain VIBNI_B1157 PF07715 TonB-dependent Receptor Plug Domain VIBNI_B1157 PF00593 TonB dependent receptor VIBNI_B1159 PF12833 Helix-turn-helix domain VIBNI_B1160 PF00005 ABC transporter VIBNI_B1160 PF03459 TOBE domain VIBNI_B1161 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_B1163 PF07685 CobB/CobQ-like glutamine amidotransferase domain VIBNI_B1167 PF18030 RimK PreATP-grasp domain VIBNI_B1167 PF08443 RimK-like ATP-grasp domain VIBNI_B1168 PF00155 Aminotransferase class I and II VIBNI_B1170 PF13597 Anaerobic ribonucleoside-triphosphate reductase VIBNI_B1170 PF03477 ATP cone domain VIBNI_B1172 PF02743 Cache domain VIBNI_B1172 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_B1172 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_B1173 PF02954 Bacterial regulatory protein, Fis family VIBNI_B1173 PF00072 Response regulator receiver domain VIBNI_B1173 PF00158 Sigma-54 interaction domain VIBNI_B1176 PF00005 ABC transporter VIBNI_B1177 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_B1178 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_B1179 PF01134 Glucose inhibited division protein A VIBNI_B1181 PF00005 ABC transporter VIBNI_B1182 PF13472 GDSL-like Lipase/Acylhydrolase family VIBNI_B1183 PF12241 Trans-2-enoyl-CoA reductase catalytic region VIBNI_B1183 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase VIBNI_B1183 PF07055 Enoyl reductase FAD binding domain VIBNI_B1184 PF00563 EAL domain VIBNI_B1184 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_B1184 PF00498 FHA domain VIBNI_B1186 PF02872 5'-nucleotidase, C-terminal domain VIBNI_B1186 PF00149 Calcineurin-like phosphoesterase VIBNI_B1187 PF11398 Protein of unknown function (DUF2813) VIBNI_B1188 PF06496 Protein of unknown function (DUF1097) VIBNI_B1189 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_B1189 PF03466 LysR substrate binding domain VIBNI_B1190 PF01226 Formate/nitrite transporter VIBNI_B1191 PF04264 YceI-like domain VIBNI_B1192 PF01292 Prokaryotic cytochrome b561 VIBNI_B1194 PF00174 Oxidoreductase molybdopterin binding domain VIBNI_B1195 PF01794 Ferric reductase like transmembrane component VIBNI_B1199 PF01926 50S ribosome-binding GTPase VIBNI_B1200 PF00563 EAL domain VIBNI_B1200 PF05231 MASE1 VIBNI_B1201 PF07683 Cobalamin synthesis protein cobW C-terminal domain VIBNI_B1201 PF02492 CobW/HypB/UreG, nucleotide-binding domain VIBNI_B1204 PF00155 Aminotransferase class I and II VIBNI_B1205 PF00072 Response regulator receiver domain VIBNI_B1205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_B1210 PF02311 AraC-like ligand binding domain VIBNI_B1210 PF12833 Helix-turn-helix domain VIBNI_B1211 PF00871 Acetokinase family VIBNI_B1213 PF00563 EAL domain VIBNI_B1213 PF03707 Bacterial signalling protein N terminal repeat VIBNI_B1213 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_B1215 PF00351 Biopterin-dependent aromatic amino acid hydroxylase VIBNI_B1225 PF00561 alpha/beta hydrolase fold VIBNI_B1226 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family VIBNI_B1227 PF02492 CobW/HypB/UreG, nucleotide-binding domain VIBNI_B1227 PF07683 Cobalamin synthesis protein cobW C-terminal domain VIBNI_B1228 PF01979 Amidohydrolase family VIBNI_B1235 PF00478 IMP dehydrogenase / GMP reductase domain VIBNI_B1236 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VIBNI_B1236 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VIBNI_B1240 PF17151 Periplasmic sensor domain VIBNI_B1240 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_B1242 PF18081 Fanconi anemia-associated nuclease SAP domain VIBNI_B1242 PF08774 VRR-NUC domain VIBNI_B1244 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_B1244 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_B1244 PF01627 Hpt domain VIBNI_B1244 PF00072 Response regulator receiver domain VIBNI_B1244 PF00672 HAMP domain VIBNI_B1245 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VIBNI_B1246 PF02142 MGS-like domain VIBNI_B1250 PF12462 DNA helicase IV / RNA helicase N terminal VIBNI_B1250 PF13361 UvrD-like helicase C-terminal domain VIBNI_B1250 PF00580 UvrD/REP helicase N-terminal domain VIBNI_B1251 PF12805 FUSC-like inner membrane protein yccS VIBNI_B1254 PF03741 Integral membrane protein TerC family VIBNI_B1257 PF00005 ABC transporter VIBNI_B1266 PF03831 PhnA domain VIBNI_B1266 PF08274 PhnA Zinc-Ribbon VIBNI_B1268 PF08240 Alcohol dehydrogenase GroES-like domain VIBNI_B1268 PF00107 Zinc-binding dehydrogenase VIBNI_B1269 PF00155 Aminotransferase class I and II VIBNI_B1270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_B1270 PF03466 LysR substrate binding domain VIBNI_B1273 PF03466 LysR substrate binding domain VIBNI_B1273 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_B1277 PF01717 Cobalamin-independent synthase, Catalytic domain VIBNI_B1277 PF08267 Cobalamin-independent synthase, N-terminal domain VIBNI_B1282 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_B1282 PF03707 Bacterial signalling protein N terminal repeat VIBNI_B1282 PF00563 EAL domain VIBNI_B1284 PF01966 HD domain VIBNI_B1286 PF03466 LysR substrate binding domain VIBNI_B1286 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_B1290 PF00300 Histidine phosphatase superfamily (branch 1) VIBNI_B1292 PF13426 PAS domain VIBNI_B1292 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_B1292 PF00563 EAL domain VIBNI_B1295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_B1295 PF09308 LuxQ, periplasmic VIBNI_B1295 PF00072 Response regulator receiver domain VIBNI_B1295 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_B1296 PF13407 Periplasmic binding protein domain VIBNI_B1297 PF00072 Response regulator receiver domain VIBNI_B1297 PF00196 Bacterial regulatory proteins, luxR family VIBNI_B1298 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term VIBNI_B1298 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_B1298 PF07730 Histidine kinase VIBNI_B1298 PF00672 HAMP domain VIBNI_B1300 PF00384 Molybdopterin oxidoreductase VIBNI_B1300 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VIBNI_B1300 PF01568 Molydopterin dinucleotide binding domain VIBNI_B1301 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) VIBNI_B1302 PF03264 NapC/NirT cytochrome c family, N-terminal region VIBNI_B1304 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus VIBNI_B1304 PF00561 alpha/beta hydrolase fold VIBNI_B1306 PF00108 Thiolase, N-terminal domain VIBNI_B1306 PF02803 Thiolase, C-terminal domain VIBNI_B1307 PF00106 short chain dehydrogenase VIBNI_B1309 PF01541 GIY-YIG catalytic domain VIBNI_B1310 PF04337 Protein of unknown function, DUF480 VIBNI_B1312 PF04363 Protein of unknown function (DUF496) VIBNI_B1314 PF00583 Acetyltransferase (GNAT) family VIBNI_B1315 PF07670 Nucleoside recognition VIBNI_B1315 PF07662 Na+ dependent nucleoside transporter C-terminus VIBNI_B1315 PF01773 Na+ dependent nucleoside transporter N-terminus VIBNI_B1318 PF03795 YCII-related domain VIBNI_B1320 PF00873 AcrB/AcrD/AcrF family VIBNI_B1321 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VIBNI_B1322 PF00072 Response regulator receiver domain VIBNI_B1322 PF04397 LytTr DNA-binding domain VIBNI_B1323 PF06580 Histidine kinase VIBNI_B1323 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_B1323 PF07694 5TMR of 5TMR-LYT VIBNI_B1327 PF00005 ABC transporter VIBNI_B1327 PF02687 FtsX-like permease family VIBNI_B1327 PF12704 MacB-like periplasmic core domain VIBNI_B1332 PF13609 Gram-negative porin VIBNI_B1333 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) VIBNI_B1335 PF01757 Acyltransferase family VIBNI_B1340 PF01256 Carbohydrate kinase VIBNI_B1340 PF03853 YjeF-related protein N-terminus VIBNI_B1342 PF07690 Major Facilitator Superfamily VIBNI_B1343 PF03707 Bacterial signalling protein N terminal repeat VIBNI_B1343 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_B1343 PF00563 EAL domain VIBNI_B1344 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VIBNI_B1345 PF13193 AMP-binding enzyme C-terminal domain VIBNI_B1345 PF00501 AMP-binding enzyme VIBNI_B1346 PF05360 yiaA/B two helix domain VIBNI_B1347 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_B1347 PF03466 LysR substrate binding domain VIBNI_B1351 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBNI_B1351 PF00672 HAMP domain VIBNI_B1353 PF00873 AcrB/AcrD/AcrF family VIBNI_B1354 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VIBNI_B1355 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_B1356 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_B1356 PF12911 N-terminal TM domain of oligopeptide transport permease C VIBNI_B1357 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VIBNI_B1357 PF00005 ABC transporter VIBNI_B1358 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_B1358 PF03466 LysR substrate binding domain VIBNI_B1359 PF16363 GDP-mannose 4,6 dehydratase VIBNI_B1364 PF03600 Citrate transporter VIBNI_B1365 PF00356 Bacterial regulatory proteins, lacI family VIBNI_B1369 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_B1369 PF00563 EAL domain VIBNI_B1369 PF03707 Bacterial signalling protein N terminal repeat VIBNI_B1377 PF01263 Aldose 1-epimerase VIBNI_B1378 PF10509 Galactokinase galactose-binding signature VIBNI_B1378 PF00288 GHMP kinases N terminal domain VIBNI_B1378 PF08544 GHMP kinases C terminal VIBNI_B1379 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain VIBNI_B1379 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain VIBNI_B1380 PF02929 Beta galactosidase small chain VIBNI_B1380 PF02836 Glycosyl hydrolases family 2, TIM barrel domain VIBNI_B1380 PF16353 Domain of unknown function(DUF4981) VIBNI_B1380 PF00703 Glycosyl hydrolases family 2 VIBNI_B1380 PF02837 Glycosyl hydrolases family 2, sugar binding domain VIBNI_B1382 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_B1384 PF17912 MalK OB fold domain VIBNI_B1384 PF00005 ABC transporter VIBNI_B1387 PF02743 Cache domain VIBNI_B1387 PF00672 HAMP domain VIBNI_B1387 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBNI_B1398 PF17912 MalK OB fold domain VIBNI_B1398 PF00005 ABC transporter VIBNI_B1398 PF03459 TOBE domain VIBNI_B1399 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase VIBNI_B1400 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_B1401 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_B1403 PF07702 UTRA domain VIBNI_B1403 PF00392 Bacterial regulatory proteins, gntR family VIBNI_B1404 PF00264 Common central domain of tyrosinase VIBNI_B1405 PF13419 Haloacid dehalogenase-like hydrolase VIBNI_B1407 PF11871 Domain of unknown function (DUF3391) VIBNI_B1407 PF01966 HD domain VIBNI_B1414 PF01177 Asp/Glu/Hydantoin racemase VIBNI_B1416 PF01758 Sodium Bile acid symporter family VIBNI_B1418 PF04542 Sigma-70 region 2 VIBNI_B1418 PF08281 Sigma-70, region 4 VIBNI_B1420 PF00561 alpha/beta hydrolase fold VIBNI_B1421 PF03280 Proteobacterial lipase chaperone protein VIBNI_B1422 PF03707 Bacterial signalling protein N terminal repeat VIBNI_B1422 PF00563 EAL domain VIBNI_B1422 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_B1425 PF12706 Beta-lactamase superfamily domain VIBNI_B1426 PF00440 Bacterial regulatory proteins, tetR family VIBNI_B1426 PF08361 MAATS-type transcriptional repressor, C-terminal region VIBNI_B1429 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VIBNI_B1432 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VIBNI_B1434 PF04115 Ureidoglycolate lyase VIBNI_B1435 PF03561 Allantoicase repeat VIBNI_B1436 PF09349 OHCU decarboxylase VIBNI_B1436 PF01014 Uricase VIBNI_B1438 PF00576 HIUase/Transthyretin family VIBNI_B1439 PF00440 Bacterial regulatory proteins, tetR family VIBNI_B1439 PF08362 YcdC-like protein, C-terminal region VIBNI_B1440 PF01274 Malate synthase VIBNI_B1442 PF03974 Ecotin VIBNI_B1458 PF00392 Bacterial regulatory proteins, gntR family VIBNI_B1458 PF00155 Aminotransferase class I and II VIBNI_B1466 PF00005 ABC transporter VIBNI_B1466 PF02687 FtsX-like permease family VIBNI_B1466 PF12704 MacB-like periplasmic core domain VIBNI_B1467 PF00005 ABC transporter VIBNI_B1467 PF02687 FtsX-like permease family VIBNI_B1467 PF12704 MacB-like periplasmic core domain VIBNI_B1468 PF12704 MacB-like periplasmic core domain VIBNI_B1468 PF02687 FtsX-like permease family VIBNI_B1468 PF00005 ABC transporter VIBNI_B1475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_B1475 PF03466 LysR substrate binding domain VIBNI_B1478 PF04151 Bacterial pre-peptidase C-terminal domain VIBNI_B1478 PF04389 Peptidase family M28 VIBNI_B1481 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain VIBNI_B1481 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase VIBNI_B1481 PF00111 2Fe-2S iron-sulfur cluster binding domain VIBNI_B1481 PF01799 [2Fe-2S] binding domain VIBNI_B1482 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase VIBNI_B1482 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain VIBNI_B1484 PF01979 Amidohydrolase family VIBNI_B1486 PF00583 Acetyltransferase (GNAT) family VIBNI_B1491 PF00392 Bacterial regulatory proteins, gntR family VIBNI_B1491 PF00155 Aminotransferase class I and II VIBNI_B1492 PF01037 Lrp/AsnC ligand binding domain VIBNI_B1493 PF13520 Amino acid permease VIBNI_B1497 PF00672 HAMP domain VIBNI_B1497 PF02743 Cache domain VIBNI_B1497 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBNI_B1498 PF01266 FAD dependent oxidoreductase VIBNI_B1499 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_B1499 PF00989 PAS fold VIBNI_B1499 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_B1500 PF01037 Lrp/AsnC ligand binding domain VIBNI_B1504 PF00158 Sigma-54 interaction domain VIBNI_B1504 PF02954 Bacterial regulatory protein, Fis family VIBNI_B1504 PF00072 Response regulator receiver domain VIBNI_B1505 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin VIBNI_B1506 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_B1508 PF00563 EAL domain VIBNI_B1508 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_B1508 PF03707 Bacterial signalling protein N terminal repeat VIBNI_B1509 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBNI_B1509 PF00672 HAMP domain VIBNI_B1510 PF00128 Alpha amylase, catalytic domain VIBNI_B1513 PF13673 Acetyltransferase (GNAT) domain VIBNI_B1514 PF03992 Antibiotic biosynthesis monooxygenase VIBNI_B1517 PF01177 Asp/Glu/Hydantoin racemase VIBNI_B1519 PF08021 Siderophore-interacting FAD-binding domain VIBNI_B1519 PF04954 Siderophore-interacting protein VIBNI_B1519 PF00005 ABC transporter VIBNI_B1519 PF00664 ABC transporter transmembrane region VIBNI_B1520 PF00664 ABC transporter transmembrane region VIBNI_B1520 PF00005 ABC transporter VIBNI_B1528 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBNI_B1528 PF17200 Single Cache domain 2 VIBNI_B1528 PF00672 HAMP domain VIBNI_B1529 PF00462 Glutaredoxin VIBNI_B1532 PF17912 MalK OB fold domain VIBNI_B1532 PF00005 ABC transporter VIBNI_B1533 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VIBNI_B1533 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VIBNI_B1534 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_B1535 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_B1537 PF02779 Transketolase, pyrimidine binding domain VIBNI_B1537 PF02780 Transketolase, C-terminal domain VIBNI_B1538 PF00456 Transketolase, thiamine diphosphate binding domain VIBNI_B1539 PF01418 Helix-turn-helix domain, rpiR family VIBNI_B1539 PF01380 SIS domain VIBNI_B1543 PF08448 PAS fold VIBNI_B1543 PF00563 EAL domain VIBNI_B1543 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_B1547 PF00892 EamA-like transporter family VIBNI_B1554 PF00072 Response regulator receiver domain VIBNI_B1554 PF02954 Bacterial regulatory protein, Fis family VIBNI_B1554 PF00158 Sigma-54 interaction domain VIBNI_B1557 PF00005 ABC transporter VIBNI_B1558 PF00672 HAMP domain VIBNI_B1558 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBNI_B1558 PF02743 Cache domain VIBNI_B1559 PF00128 Alpha amylase, catalytic domain VIBNI_B1559 PF02806 Alpha amylase, C-terminal all-beta domain VIBNI_B1559 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VIBNI_B1560 PF02446 4-alpha-glucanotransferase VIBNI_B1561 PF00343 Carbohydrate phosphorylase VIBNI_B1563 PF00196 Bacterial regulatory proteins, luxR family VIBNI_B1563 PF17874 MalT-like TPR region VIBNI_B1567 PF00246 Zinc carboxypeptidase VIBNI_B1569 PF02630 SCO1/SenC VIBNI_B1572 PF03193 RsgA GTPase VIBNI_B1573 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_B1573 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_B1573 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VIBNI_B1573 PF00072 Response regulator receiver domain VIBNI_B1573 PF01627 Hpt domain VIBNI_B1573 PF00672 HAMP domain VIBNI_B1574 PF00375 Sodium:dicarboxylate symporter family VIBNI_B1577 PF00128 Alpha amylase, catalytic domain VIBNI_B1577 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VIBNI_B1578 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_B1581 PF00664 ABC transporter transmembrane region VIBNI_B1581 PF00005 ABC transporter VIBNI_B1583 PF01037 Lrp/AsnC ligand binding domain VIBNI_B1584 PF07670 Nucleoside recognition VIBNI_B1587 PF01219 Prokaryotic diacylglycerol kinase VIBNI_B1588 PF03889 Alternative ribosome-rescue factor A VIBNI_B1596 PF01557 Fumarylacetoacetate (FAA) hydrolase family VIBNI_B1597 PF01047 MarR family VIBNI_B1598 PF13476 AAA domain VIBNI_B1599 PF12320 Type 5 capsule protein repressor C-terminal domain VIBNI_B1599 PF00149 Calcineurin-like phosphoesterase VIBNI_B1601 PF00483 Nucleotidyl transferase VIBNI_B1603 PF00664 ABC transporter transmembrane region VIBNI_B1603 PF00005 ABC transporter VIBNI_B1609 PF03808 Glycosyl transferase WecB/TagA/CpsF family VIBNI_B1613 PF13439 Glycosyltransferase Family 4 VIBNI_B1613 PF00534 Glycosyl transferases group 1 VIBNI_B1614 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 VIBNI_B1614 PF00535 Glycosyl transferase family 2 VIBNI_B1615 PF00534 Glycosyl transferases group 1 VIBNI_B1615 PF13439 Glycosyltransferase Family 4 VIBNI_B1617 PF04230 Polysaccharide pyruvyl transferase VIBNI_B1618 PF00535 Glycosyl transferase family 2 VIBNI_B1619 PF13614 AAA domain VIBNI_B1619 PF13807 G-rich domain on putative tyrosine kinase VIBNI_B1619 PF02706 Chain length determinant protein VIBNI_B1622 PF02397 Bacterial sugar transferase VIBNI_B1623 PF00196 Bacterial regulatory proteins, luxR family VIBNI_B1628 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_B1629 PF14785 Maltose transport system permease protein MalF P2 domain VIBNI_B1629 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_B1630 PF01547 Bacterial extracellular solute-binding protein VIBNI_B1631 PF00005 ABC transporter VIBNI_B1631 PF08402 TOBE domain VIBNI_B1633 PF00196 Bacterial regulatory proteins, luxR family VIBNI_B1635 PF02743 Cache domain VIBNI_B1635 PF00672 HAMP domain VIBNI_B1635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBNI_B1636 PF17863 AAA lid domain VIBNI_B1636 PF07726 ATPase family associated with various cellular activities (AAA) VIBNI_B1637 PF01882 Protein of unknown function DUF58 VIBNI_B1640 PF13519 von Willebrand factor type A domain VIBNI_B1642 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_B1642 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_B1643 PF00486 Transcriptional regulatory protein, C terminal VIBNI_B1643 PF00072 Response regulator receiver domain VIBNI_B1644 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VIBNI_B1644 PF00497 Bacterial extracellular solute-binding proteins, family 3 VIBNI_B1644 PF00512 His Kinase A (phospho-acceptor) domain VIBNI_B1645 PF11849 Domain of unknown function (DUF3369) VIBNI_B1646 PF00962 Adenosine/AMP deaminase VIBNI_B1647 PF02743 Cache domain VIBNI_B1647 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBNI_B1647 PF00672 HAMP domain VIBNI_B1648 PF01040 UbiA prenyltransferase family VIBNI_B1649 PF02628 Cytochrome oxidase assembly protein VIBNI_B1653 PF00510 Cytochrome c oxidase subunit III VIBNI_B1654 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 VIBNI_B1655 PF00115 Cytochrome C and Quinol oxidase polypeptide I VIBNI_B1656 PF00116 Cytochrome C oxidase subunit II, periplasmic domain VIBNI_B1656 PF02790 Cytochrome C oxidase subunit II, transmembrane domain VIBNI_B1658 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VIBNI_B1658 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VIBNI_B1658 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VIBNI_B1658 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VIBNI_B1659 PF04231 Endonuclease I VIBNI_B1660 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VIBNI_B1660 PF00005 ABC transporter VIBNI_B1661 PF03069 Acetamidase/Formamidase family VIBNI_B1662 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VIBNI_B1663 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_B1669 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VIBNI_B1670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_B1670 PF03466 LysR substrate binding domain VIBNI_B1671 PF00106 short chain dehydrogenase VIBNI_B1672 PF07070 SpoOM protein VIBNI_B1681 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VIBNI_B1681 PF12793 Sugar transport-related sRNA regulator N-term VIBNI_B1687 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_B1688 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_B1690 PF00356 Bacterial regulatory proteins, lacI family VIBNI_B1692 PF02525 Flavodoxin-like fold VIBNI_B1694 PF12833 Helix-turn-helix domain VIBNI_B1694 PF02311 AraC-like ligand binding domain VIBNI_B1696 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_B1696 PF03466 LysR substrate binding domain VIBNI_B1698 PF02423 Ornithine cyclodeaminase/mu-crystallin family VIBNI_B1701 PF03466 LysR substrate binding domain VIBNI_B1701 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_B1702 PF01614 Bacterial transcriptional regulator VIBNI_B1702 PF09339 IclR helix-turn-helix domain VIBNI_B1703 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VIBNI_B1703 PF00005 ABC transporter VIBNI_B1704 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_B1704 PF12911 N-terminal TM domain of oligopeptide transport permease C VIBNI_B1705 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_B1708 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VIBNI_B1708 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VIBNI_B1710 PF16901 C-terminal domain of alpha-glycerophosphate oxidase VIBNI_B1710 PF01266 FAD dependent oxidoreductase VIBNI_B1713 PF01590 GAF domain VIBNI_B1713 PF00158 Sigma-54 interaction domain VIBNI_B1713 PF02954 Bacterial regulatory protein, Fis family VIBNI_B1714 PF17912 MalK OB fold domain VIBNI_B1714 PF00005 ABC transporter VIBNI_B1715 PF08402 TOBE domain VIBNI_B1715 PF00005 ABC transporter VIBNI_B1716 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_B1717 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_B1723 PF00480 ROK family VIBNI_B1725 PF08402 TOBE domain VIBNI_B1725 PF00005 ABC transporter VIBNI_B1726 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_B1731 PF07715 TonB-dependent Receptor Plug Domain VIBNI_B1731 PF04886 PT repeat VIBNI_B1731 PF00593 TonB dependent receptor VIBNI_B1732 PF00326 Prolyl oligopeptidase family VIBNI_B1732 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain VIBNI_B1734 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_B1735 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_B1736 PF00232 Glycosyl hydrolase family 1 VIBNI_B1737 PF17912 MalK OB fold domain VIBNI_B1737 PF00005 ABC transporter VIBNI_B1738 PF00356 Bacterial regulatory proteins, lacI family VIBNI_B1740 PF00561 alpha/beta hydrolase fold VIBNI_B1741 PF00196 Bacterial regulatory proteins, luxR family VIBNI_B1741 PF00072 Response regulator receiver domain VIBNI_B1744 PF01042 Endoribonuclease L-PSP VIBNI_B1745 PF03313 Serine dehydratase alpha chain VIBNI_B1747 PF00270 DEAD/DEAH box helicase VIBNI_B1747 PF00271 Helicase conserved C-terminal domain VIBNI_B1749 PF03734 L,D-transpeptidase catalytic domain VIBNI_B1749 PF17969 L,D-transpeptidase C-terminal domain VIBNI_B1749 PF01476 LysM domain VIBNI_B1750 PF00875 DNA photolyase VIBNI_B1750 PF03441 FAD binding domain of DNA photolyase VIBNI_B1751 PF13411 MerR HTH family regulatory protein VIBNI_B1752 PF08349 Protein of unknown function (DUF1722) VIBNI_B1753 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VIBNI_B1753 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VIBNI_B1755 PF01048 Phosphorylase superfamily VIBNI_B1758 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_B1760 PF11742 Protein of unknown function (DUF3302) VIBNI_B1761 PF00529 HlyD membrane-fusion protein of T1SS VIBNI_B1761 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VIBNI_B1762 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_B1762 PF00072 Response regulator receiver domain VIBNI_B1763 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_B1763 PF17158 Membrane-associated sensor, integral membrane domain VIBNI_B1765 PF01965 DJ-1/PfpI family VIBNI_B1768 PF03824 High-affinity nickel-transport protein VIBNI_B1770 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain VIBNI_B1770 PF00326 Prolyl oligopeptidase family VIBNI_B1778 PF00672 HAMP domain VIBNI_B1778 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBNI_B1778 PF02743 Cache domain VIBNI_B1780 PF04542 Sigma-70 region 2 VIBNI_B1780 PF08281 Sigma-70, region 4 VIBNI_B1782 PF00326 Prolyl oligopeptidase family VIBNI_B1782 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain VIBNI_B1783 PF01081 KDPG and KHG aldolase VIBNI_B1784 PF01380 SIS domain VIBNI_B1784 PF01418 Helix-turn-helix domain, rpiR family VIBNI_B1785 PF12706 Beta-lactamase superfamily domain VIBNI_B1786 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VIBNI_B1786 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VIBNI_B1788 PF06560 Glucose-6-phosphate isomerase (GPI) VIBNI_B1789 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_B1790 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_B1792 PF00005 ABC transporter VIBNI_B1792 PF17912 MalK OB fold domain VIBNI_B1793 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VIBNI_B1793 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VIBNI_B1794 PF13407 Periplasmic binding protein domain VIBNI_B1795 PF00005 ABC transporter VIBNI_B1796 PF02653 Branched-chain amino acid transport system / permease component VIBNI_B1798 PF13419 Haloacid dehalogenase-like hydrolase VIBNI_B1799 PF00465 Iron-containing alcohol dehydrogenase VIBNI_B1800 PF00583 Acetyltransferase (GNAT) family VIBNI_B1801 PF08220 DeoR-like helix-turn-helix domain VIBNI_B1801 PF00455 DeoR C terminal sensor domain VIBNI_B1802 PF00294 pfkB family carbohydrate kinase VIBNI_B1803 PF02311 AraC-like ligand binding domain VIBNI_B1803 PF12833 Helix-turn-helix domain VIBNI_B1807 PF00005 ABC transporter VIBNI_B1807 PF00664 ABC transporter transmembrane region VIBNI_B1807 PF03412 Peptidase C39 family VIBNI_B1808 PF13533 Biotin-lipoyl like VIBNI_B1812 PF04738 Lantibiotic dehydratase, N terminus VIBNI_B1812 PF14028 Lantibiotic biosynthesis dehydratase C-term VIBNI_B1816 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal VIBNI_B1816 PF00132 Bacterial transferase hexapeptide (six repeats) VIBNI_B1816 PF14602 Hexapeptide repeat of succinyl-transferase VIBNI_B1818 PF00704 Glycosyl hydrolases family 18 VIBNI_B1825 PF02311 AraC-like ligand binding domain VIBNI_B1825 PF12833 Helix-turn-helix domain VIBNI_B1826 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain VIBNI_B1826 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VIBNI_B1827 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase VIBNI_B1828 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain VIBNI_B1828 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain VIBNI_B1831 PF07238 PilZ domain VIBNI_B1831 PF12945 Flagellar protein YcgR VIBNI_B1832 PF00313 'Cold-shock' DNA-binding domain VIBNI_B1836 PF00578 AhpC/TSA family VIBNI_B1837 PF06965 Na+/H+ antiporter 1 VIBNI_B1837 PF13462 Thioredoxin VIBNI_B1838 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_B1843 PF01810 LysE type translocator VIBNI_B1845 PF02355 Protein export membrane protein VIBNI_B1845 PF13721 SecD export protein N-terminal TM region VIBNI_B1845 PF07549 SecD/SecF GG Motif VIBNI_B1846 PF07549 SecD/SecF GG Motif VIBNI_B1846 PF02355 Protein export membrane protein VIBNI_B1847 PF03466 LysR substrate binding domain VIBNI_B1847 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_B1848 PF07286 Protein of unknown function (DUF1445) VIBNI_B1851 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VIBNI_B1852 PF03746 LamB/YcsF family VIBNI_B1853 PF02682 Carboxyltransferase domain, subdomain C and D VIBNI_B1854 PF02626 Carboxyltransferase domain, subdomain A and B VIBNI_B1861 PF00672 HAMP domain VIBNI_B1861 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBNI_B1861 PF17200 Single Cache domain 2 VIBNI_B1862 PF03616 Sodium/glutamate symporter VIBNI_B1866 PF00561 alpha/beta hydrolase fold VIBNI_B1871 PF04463 Protein of unknown function (DUF523) VIBNI_B1873 PF00583 Acetyltransferase (GNAT) family VIBNI_B1874 PF01844 HNH endonuclease VIBNI_B1875 PF01522 Polysaccharide deacetylase VIBNI_B1875 PF00457 Glycosyl hydrolases family 11 VIBNI_B1875 PF03422 Carbohydrate binding module (family 6) VIBNI_B1889 PF05870 Phenolic acid decarboxylase (PAD) VIBNI_B1893 PF04399 Glutaredoxin 2, C terminal domain VIBNI_B1893 PF13417 Glutathione S-transferase, N-terminal domain VIBNI_B1895 PF01161 Phosphatidylethanolamine-binding protein VIBNI_B1897 PF11775 Cobalamin biosynthesis protein CobT VWA domain VIBNI_B1897 PF06213 Cobalamin biosynthesis protein CobT VIBNI_B1898 PF08406 CbbQ/NirQ/NorQ C-terminal VIBNI_B1898 PF07728 AAA domain (dynein-related subfamily) VIBNI_B1898 PF12556 Cobaltochelatase CobS subunit N terminal VIBNI_B1899 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VIBNI_B1899 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VIBNI_B1899 PF00205 Thiamine pyrophosphate enzyme, central domain VIBNI_B1902 PF03480 Bacterial extracellular solute-binding protein, family 7 VIBNI_B1903 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component VIBNI_B1904 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VIBNI_B1907 PF01614 Bacterial transcriptional regulator VIBNI_B1907 PF09339 IclR helix-turn-helix domain VIBNI_B1910 PF01970 Tripartite tricarboxylate transporter TctA family VIBNI_B1914 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBNI_B1914 PF00672 HAMP domain VIBNI_B1914 PF02743 Cache domain VIBNI_B1918 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VIBNI_B1924 PF00171 Aldehyde dehydrogenase family VIBNI_B1930 PF12833 Helix-turn-helix domain VIBNI_B1939 PF07690 Major Facilitator Superfamily VIBNI_B1940 PF12833 Helix-turn-helix domain VIBNI_B1940 PF02311 AraC-like ligand binding domain VIBNI_B1942 PF17676 LD-carboxypeptidase C-terminal domain VIBNI_B1942 PF02016 LD-carboxypeptidase N-terminal domain VIBNI_B1944 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VIBNI_B1944 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VIBNI_B1946 PF13654 AAA domain VIBNI_B1946 PF05362 Lon protease (S16) C-terminal proteolytic domain VIBNI_B1950 PF08028 Acyl-CoA dehydrogenase, C-terminal domain VIBNI_B1951 PF01613 Flavin reductase like domain VIBNI_B1952 PF01557 Fumarylacetoacetate (FAA) hydrolase family VIBNI_B1953 PF03328 HpcH/HpaI aldolase/citrate lyase family VIBNI_B1954 PF01557 Fumarylacetoacetate (FAA) hydrolase family VIBNI_B1955 PF01557 Fumarylacetoacetate (FAA) hydrolase family VIBNI_B1961 PF13361 UvrD-like helicase C-terminal domain VIBNI_B1961 PF00580 UvrD/REP helicase N-terminal domain VIBNI_B1962 PF01555 DNA methylase VIBNI_B1969 PF00303 Thymidylate synthase VIBNI_B1975 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase VIBNI_B1976 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase VIBNI_B1977 PF00171 Aldehyde dehydrogenase family VIBNI_B1978 PF01266 FAD dependent oxidoreductase VIBNI_B1982 PF00582 Universal stress protein family VIBNI_B1983 PF03401 Tripartite tricarboxylate transporter family receptor VIBNI_B1988 PF00005 ABC transporter VIBNI_B1988 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VIBNI_B1989 PF03707 Bacterial signalling protein N terminal repeat VIBNI_B1989 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_B1989 PF00563 EAL domain VIBNI_B1990 PF03466 LysR substrate binding domain VIBNI_B1990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_B1991 PF00465 Iron-containing alcohol dehydrogenase VIBNI_B1993 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VIBNI_B1993 PF12729 Four helix bundle sensory module for signal transduction VIBNI_B1993 PF00672 HAMP domain VIBNI_B1995 PF00801 PKD domain VIBNI_B1995 PF05547 Immune inhibitor A peptidase M6 VIBNI_B2024 PF00360 Phytochrome region VIBNI_B2024 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_B2024 PF00563 EAL domain VIBNI_B2024 PF01590 GAF domain VIBNI_B2025 PF07690 Major Facilitator Superfamily VIBNI_B2026 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VIBNI_B2026 PF03466 LysR substrate binding domain VIBNI_B2027 PF00563 EAL domain VIBNI_B2027 PF08447 PAS fold VIBNI_B2027 PF08448 PAS fold VIBNI_B2027 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_B2031 PF00355 Rieske [2Fe-2S] domain VIBNI_B2032 PF14759 Reductase C-terminal VIBNI_B2032 PF07992 Pyridine nucleotide-disulphide oxidoreductase VIBNI_B2034 PF00005 ABC transporter VIBNI_B2035 PF02653 Branched-chain amino acid transport system / permease component VIBNI_B2037 PF02653 Branched-chain amino acid transport system / permease component VIBNI_B2038 PF03480 Bacterial extracellular solute-binding protein, family 7 VIBNI_B2039 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VIBNI_B2040 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component VIBNI_B2041 PF02615 Malate/L-lactate dehydrogenase VIBNI_B2042 PF00107 Zinc-binding dehydrogenase VIBNI_B2042 PF08240 Alcohol dehydrogenase GroES-like domain VIBNI_B2043 PF08125 Mannitol dehydrogenase C-terminal domain VIBNI_B2043 PF01232 Mannitol dehydrogenase Rossmann domain VIBNI_B2045 PF13378 Enolase C-terminal domain-like VIBNI_B2045 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain VIBNI_B2047 PF00392 Bacterial regulatory proteins, gntR family VIBNI_B2047 PF07729 FCD domain VIBNI_B2048 PF00171 Aldehyde dehydrogenase family VIBNI_B2049 PF00732 GMC oxidoreductase VIBNI_B2049 PF05199 GMC oxidoreductase VIBNI_B2050 PF01081 KDPG and KHG aldolase VIBNI_B2051 PF00294 pfkB family carbohydrate kinase VIBNI_B2053 PF00793 DAHP synthetase I family VIBNI_B2054 PF00990 Diguanylate cyclase, GGDEF domain VIBNI_B2061 PF00561 alpha/beta hydrolase fold VIBNI_B2062 PF02614 Glucuronate isomerase VIBNI_B2063 PF01232 Mannitol dehydrogenase Rossmann domain VIBNI_B2063 PF08125 Mannitol dehydrogenase C-terminal domain VIBNI_B2064 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VIBNI_B2065 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component VIBNI_B2066 PF03480 Bacterial extracellular solute-binding protein, family 7 VIBNI_B2067 PF07729 FCD domain VIBNI_B2067 PF00392 Bacterial regulatory proteins, gntR family VIBNI_B2068 PF03786 D-mannonate dehydratase (UxuA) VIBNI_B2074 PF01042 Endoribonuclease L-PSP VIBNI_B2078 PF13673 Acetyltransferase (GNAT) domain VIBNI_B2079 PF04235 Protein of unknown function (DUF418) VIBNI_B2080 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ VIBNI_B2082 PF03437 BtpA family VIBNI_B2085 PF13419 Haloacid dehalogenase-like hydrolase VIBNI_B2086 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VIBNI_B2086 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VIBNI_B2087 PF08220 DeoR-like helix-turn-helix domain VIBNI_B2087 PF00455 DeoR C terminal sensor domain VIBNI_B2090 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_B2091 PF00528 Binding-protein-dependent transport system inner membrane component VIBNI_B2092 PF08402 TOBE domain VIBNI_B2092 PF00005 ABC transporter VIBNI_B2097 PF09339 IclR helix-turn-helix domain VIBNI_B2097 PF01614 Bacterial transcriptional regulator VIBNI_B2099 PF00171 Aldehyde dehydrogenase family VIBNI_B2100 PF00465 Iron-containing alcohol dehydrogenase VIBNI_B2103 PF00005 ABC transporter VIBNI_B2104 PF02653 Branched-chain amino acid transport system / permease component VIBNI_B2105 PF04198 Putative sugar-binding domain VIBNI_B2106 PF00248 Aldo/keto reductase family VIBNI_B2107 PF01266 FAD dependent oxidoreductase VIBNI_B2107 PF16901 C-terminal domain of alpha-glycerophosphate oxidase VIBNI_B2108 PF01791 DeoC/LacD family aldolase VIBNI_B2109 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VIBNI_B2109 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VIBNI_B2110 PF03422 Carbohydrate binding module (family 6) VIBNI_B2110 PF02412 Thrombospondin type 3 repeat VIBNI_B2112 PF13302 Acetyltransferase (GNAT) domain VIBNI_B2114 PF01625 Peptide methionine sulfoxide reductase VIBNI_B2115 PF01641 SelR domain VIBNI_B2117 PF02657 Fe-S metabolism associated domain VIBNI_B2118 PF00266 Aminotransferase class-V VIBNI_B2119 PF01458 Uncharacterized protein family (UPF0051) VIBNI_B2120 PF00005 ABC transporter VIBNI_B2121 PF01458 Uncharacterized protein family (UPF0051) VIBNI_B2122 PF01521 Iron-sulphur cluster biosynthesis VIBNI_B2124 PF00563 EAL domain VIBNI_B2124 PF05231 MASE1 VIBNI_B2130 PF04389 Peptidase family M28 VIBNI_B2130 PF04151 Bacterial pre-peptidase C-terminal domain VIBNI_B2134 PF01261 Xylose isomerase-like TIM barrel VIBNI_B2135 PF02653 Branched-chain amino acid transport system / permease component VIBNI_B2136 PF02653 Branched-chain amino acid transport system / permease component VIBNI_B2137 PF00005 ABC transporter VIBNI_B2138 PF13407 Periplasmic binding protein domain VIBNI_B2140 PF00356 Bacterial regulatory proteins, lacI family VIBNI_B2141 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family VIBNI_B2146 PF08281 Sigma-70, region 4 VIBNI_B2146 PF04542 Sigma-70 region 2 VIBNI_B2150 PF13411 MerR HTH family regulatory protein VIBNI_B2151 PF00293 NUDIX domain VIBNI_B2155 PF01497 Periplasmic binding protein VIBNI_B2156 PF01032 FecCD transport family VIBNI_B2157 PF01032 FecCD transport family VIBNI_B2158 PF00005 ABC transporter VIBNI_B2159 PF00459 Inositol monophosphatase family VIBNI_B2165 PF14824 Sirohaem biosynthesis protein central VIBNI_B2165 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VIBNI_B2165 PF10414 Sirohaem synthase dimerisation region VIBNI_B2166 PF01226 Formate/nitrite transporter VIBNI_B2167 PF13806 Rieske-like [2Fe-2S] domain VIBNI_B2168 PF07992 Pyridine nucleotide-disulphide oxidoreductase VIBNI_B2168 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain VIBNI_B2168 PF01077 Nitrite and sulphite reductase 4Fe-4S domain VIBNI_B2168 PF18267 Rubredoxin NAD+ reductase C-terminal domain VIBNI_B2168 PF04324 BFD-like [2Fe-2S] binding domain VIBNI_B2175 PF00005 ABC transporter VIBNI_B2175 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VIBNI_B2176 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VIBNI_B2176 PF00005 ABC transporter